BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (337 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B7LKC2 Cytoskeleton protein rodZ n=62 Tax=Enterobacteri... 565 e-160 UniRef50_A7MGV6 Cytoskeleton protein rodZ n=51 Tax=Enterobacteri... 482 e-135 UniRef50_C8Q4J6 Transcriptional regulator, XRE family n=8 Tax=En... 421 e-116 UniRef50_C4UGF5 Uncharacterized HTH-type transcriptional regulat... 378 e-103 UniRef50_B1JS04 Cytoskeleton protein rodZ n=32 Tax=Enterobacteri... 377 e-103 UniRef50_C6CAL7 Transcriptional regulator, XRE family n=1 Tax=Di... 333 5e-90 UniRef50_D2TXC4 DNA-binding protein n=1 Tax=Arsenophonus nasonia... 276 1e-72 UniRef50_D1P3Q8 Putative membrane protein n=3 Tax=Providencia Re... 273 5e-72 UniRef50_B2Q0X0 Putative uncharacterized protein n=1 Tax=Provide... 268 2e-70 UniRef50_C2LI02 Helix-turn-helix DNA-binding domain protein n=3 ... 258 2e-67 UniRef50_B8K783 Integral membrane protein n=4 Tax=Vibrio RepID=B... 186 1e-45 UniRef50_A6AQ33 Integral membrane protein n=14 Tax=Vibrionales R... 181 4e-44 UniRef50_A0KJ43 Putative uncharacterized protein n=2 Tax=Aeromon... 181 5e-44 UniRef50_Q5E773 Integral membrane protein n=3 Tax=Aliivibrio Rep... 178 2e-43 UniRef50_Q1ZRE7 Hypothetical DNA-binding protein n=4 Tax=Photoba... 177 4e-43 UniRef50_C9P6C4 Putative uncharacterized protein n=2 Tax=Vibrio ... 177 5e-43 UniRef50_D0I7P6 Putative uncharacterized protein n=1 Tax=Grimont... 176 8e-43 UniRef50_C9NQN4 Putative uncharacterized protein n=1 Tax=Vibrio ... 174 4e-42 UniRef50_Q6LU50 Hypothetical DNA-binding protein n=1 Tax=Photoba... 167 7e-40 UniRef50_C4LC36 Transcriptional regulator, XRE family n=1 Tax=To... 163 7e-39 UniRef50_B0TLI3 Putative uncharacterized protein n=2 Tax=Shewane... 160 5e-38 UniRef50_A6ADB9 Integral membrane protein (Fragment) n=34 Tax=Vi... 158 3e-37 UniRef50_UPI0001A447F2 hypothetical protein PcarcW_15601 n=1 Tax... 153 8e-36 UniRef50_A6FA10 Putative uncharacterized protein n=1 Tax=Moritel... 137 6e-31 UniRef50_B8CKR0 DNA-binding protein, putative n=1 Tax=Shewanella... 131 4e-29 UniRef50_A1S864 Putative uncharacterized protein n=1 Tax=Shewane... 130 7e-29 UniRef50_Q47WB9 Putative uncharacterized protein n=1 Tax=Colwell... 129 2e-28 UniRef50_A3WP02 Predicted transcriptional regulator, contains N-... 127 5e-28 UniRef50_A3QCG1 Putative uncharacterized protein n=1 Tax=Shewane... 127 7e-28 UniRef50_Q12PT5 Putative uncharacterized protein n=1 Tax=Shewane... 122 1e-26 UniRef50_C7R5S7 Putative uncharacterized protein n=1 Tax=Kangiel... 121 3e-26 UniRef50_Q0HKW0 Putative uncharacterized protein n=11 Tax=Shewan... 119 2e-25 UniRef50_UPI0000E0F4D9 hypothetical protein GHTCC_02974 n=1 Tax=... 119 2e-25 UniRef50_C9R6E7 Putative uncharacterized protein n=2 Tax=Pasteur... 118 3e-25 UniRef50_A1TZP9 Putative uncharacterized protein n=1 Tax=Marinob... 117 4e-25 UniRef50_Q3ICZ4 Putative transcriptional regulator, HTH domain n... 117 6e-25 UniRef50_A3Y633 Putative uncharacterized protein n=1 Tax=Marinom... 117 7e-25 UniRef50_B4RV90 Putative uncharacterized protein n=2 Tax=Alterom... 116 9e-25 UniRef50_Q5QYA8 Predicted transcriptional regulator, contains N-... 116 1e-24 UniRef50_Q15R55 Transcriptional regulator, XRE family n=1 Tax=Ps... 115 2e-24 UniRef50_A4C7F7 Putative transcriptional regulator, HTH domain n... 115 2e-24 UniRef50_Q085U7 Putative uncharacterized protein n=1 Tax=Shewane... 115 2e-24 UniRef50_B9CX69 Putative uncharacterized protein n=2 Tax=Actinob... 112 2e-23 UniRef50_A6VQX7 Helix-turn-helix domain protein n=4 Tax=Pasteure... 110 8e-23 UniRef50_Q1QTK9 Transcriptional regulator, XRE family n=1 Tax=Ch... 108 4e-22 UniRef50_Q2BGS7 Putative uncharacterized protein n=1 Tax=Neptuni... 106 1e-21 UniRef50_B8F8B5 Putative uncharacterized protein n=1 Tax=Haemoph... 106 1e-21 UniRef50_B1KKJ1 Putative uncharacterized protein n=1 Tax=Shewane... 105 3e-21 UniRef50_A8FT69 Putative uncharacterized protein n=1 Tax=Shewane... 105 3e-21 UniRef50_A3N1H9 Putative uncharacterized protein n=4 Tax=Pasteur... 102 1e-20 UniRef50_C5BLW0 Transcriptional regulator, Cro/CI family n=1 Tax... 102 3e-20 UniRef50_C6AJL0 Putative uncharacterized protein n=1 Tax=Aggrega... 100 7e-20 UniRef50_A6VV05 Putative uncharacterized protein n=1 Tax=Marinom... 100 1e-19 UniRef50_UPI0001698B56 hypothetical protein Epers_35392 n=1 Tax=... 99 2e-19 UniRef50_A6EWG5 Putative uncharacterized protein n=1 Tax=Marinob... 99 2e-19 UniRef50_B3PDM0 Putative DNA-binding protein n=1 Tax=Cellvibrio ... 97 6e-19 UniRef50_Q8D1Y4 YfgA protein n=1 Tax=Wigglesworthia glossinidia ... 96 1e-18 UniRef50_Q3SL71 Putative uncharacterized protein n=1 Tax=Thiobac... 93 1e-17 UniRef50_Q7VME3 Putative uncharacterized protein n=1 Tax=Haemoph... 92 2e-17 UniRef50_A4BSV3 Putative uncharacterized protein n=1 Tax=Nitroco... 92 3e-17 UniRef50_A3JJP6 Putative uncharacterized protein n=1 Tax=Marinob... 91 4e-17 UniRef50_Q57065 Uncharacterized protein HI0367 n=17 Tax=Pasteure... 90 9e-17 UniRef50_Q1ZDU0 Putative uncharacterized protein n=1 Tax=Psychro... 90 1e-16 UniRef50_A7JX56 Putative uncharacterized protein n=2 Tax=Mannhei... 89 2e-16 UniRef50_Q1H0U8 Putative uncharacterized protein n=1 Tax=Methylo... 88 5e-16 UniRef50_A4XY33 Helix-turn-helix domain protein n=1 Tax=Pseudomo... 87 1e-15 UniRef50_B5EJF2 Transcriptional regulator, XRE family n=2 Tax=Ac... 86 1e-15 UniRef50_D0KWA6 Putative uncharacterized protein n=1 Tax=Halothi... 85 3e-15 UniRef50_B2U9U8 Transcriptional regulator, XRE family n=6 Tax=Ra... 85 3e-15 UniRef50_Q2SDW3 Uncharacterized protein conserved in bacteria n=... 85 4e-15 UniRef50_C6XEI7 Putative uncharacterized protein n=1 Tax=Methylo... 84 6e-15 UniRef50_A0YCF8 Putative uncharacterized protein n=1 Tax=marine ... 84 9e-15 UniRef50_A1SU38 Putative uncharacterized protein n=1 Tax=Psychro... 82 3e-14 UniRef50_C5V4P9 Putative uncharacterized protein n=1 Tax=Gallion... 81 6e-14 UniRef50_Q3YJ01 Putative uncharacterized protein (Fragment) n=1 ... 80 1e-13 UniRef50_B5JY14 Putative uncharacterized protein n=1 Tax=gamma p... 77 9e-13 UniRef50_C6MCA6 Putative uncharacterized protein n=1 Tax=Nitroso... 77 1e-12 UniRef50_Q608X3 Putative uncharacterized protein n=1 Tax=Methylo... 75 3e-12 UniRef50_A9D324 Putative uncharacterized protein n=1 Tax=Shewane... 75 4e-12 UniRef50_C6NZ97 Putative uncharacterized protein n=1 Tax=Siderox... 75 5e-12 UniRef50_B0KPI6 Transcriptional regulator, XRE family n=22 Tax=P... 75 5e-12 UniRef50_C5S9Y0 Transcriptional regulator, XRE family n=1 Tax=Al... 73 1e-11 UniRef50_Q1LLJ0 Transcriptional regulator, XRE family n=2 Tax=Cu... 72 2e-11 UniRef50_A1K3Y8 Transcriptional regulator n=2 Tax=Rhodocyclaceae... 71 5e-11 UniRef50_C0N2P2 Putative uncharacterized protein n=1 Tax=Methylo... 71 6e-11 UniRef50_Q47BR5 Putative uncharacterized protein n=1 Tax=Dechlor... 69 2e-10 UniRef50_C8PVJ8 Putative uncharacterized protein n=1 Tax=Enhydro... 69 3e-10 UniRef50_Q0AE41 Putative uncharacterized protein n=2 Tax=Nitroso... 68 4e-10 UniRef50_C7RN39 Putative uncharacterized protein n=1 Tax=Candida... 68 6e-10 UniRef50_C3X7I5 Predicted protein n=2 Tax=Oxalobacter formigenes... 68 6e-10 UniRef50_B8GTN5 Transcriptional regulator n=1 Tax=Thioalkalivibr... 67 1e-09 UniRef50_C4GFD8 Putative uncharacterized protein n=1 Tax=Kingell... 67 1e-09 UniRef50_C0EJV6 Putative uncharacterized protein n=4 Tax=Neisser... 65 4e-09 UniRef50_C4KCN7 Transcriptional regulator n=1 Tax=Thauera sp. MZ... 64 9e-09 UniRef50_A9KFU7 Integral membrane protein n=6 Tax=Coxiella burne... 63 2e-08 UniRef50_B5WST2 Transcriptional regulator, XRE family n=4 Tax=Bu... 63 2e-08 UniRef50_C8NBB0 Putative uncharacterized protein n=1 Tax=Cardiob... 62 2e-08 UniRef50_C6WV26 Putative uncharacterized protein n=1 Tax=Methylo... 62 2e-08 UniRef50_C6N7L3 DNA-binding protein, putative n=1 Tax=Legionella... 62 3e-08 UniRef50_Q0A987 Transcriptional regulator, XRE family n=1 Tax=Al... 62 4e-08 UniRef50_A5EVN3 Putative uncharacterized protein n=1 Tax=Dichelo... 59 3e-07 UniRef50_Q2Y6F4 Putative uncharacterized protein n=1 Tax=Nitroso... 58 5e-07 UniRef50_D1RE75 Putative uncharacterized protein n=1 Tax=Legione... 56 2e-06 UniRef50_B1XXL4 Putative uncharacterized protein n=1 Tax=Leptoth... 56 2e-06 UniRef50_A5WGQ2 Uncharacterized protein-like protein n=3 Tax=Psy... 56 2e-06 UniRef50_A4JEP1 Transcriptional regulator, XRE family n=6 Tax=Bu... 55 2e-06 UniRef50_Q21KT4 Putative uncharacterized protein n=1 Tax=Sacchar... 55 3e-06 UniRef50_C7I047 Putative uncharacterized protein n=1 Tax=Thiomon... 55 4e-06 UniRef50_B4SSW5 Transcriptional regulator, XRE family n=20 Tax=X... 55 4e-06 UniRef50_A7C763 Putative uncharacterized protein n=1 Tax=Beggiat... 54 7e-06 UniRef50_Q0VND9 Putative uncharacterized protein n=2 Tax=Alcaniv... 54 1e-05 UniRef50_C8QXV7 Putative uncharacterized protein n=1 Tax=Desulfu... 54 1e-05 UniRef50_C5CXG5 Putative uncharacterized protein n=1 Tax=Variovo... 53 2e-05 UniRef50_Q5ZV95 DNA-binding protein, putative n=4 Tax=Legionella... 52 2e-05 UniRef50_Q9PG41 Putative uncharacterized protein n=1 Tax=Xylella... 52 3e-05 UniRef50_C5TVA8 XRE family transcriptional regulator n=3 Tax=Des... 52 3e-05 UniRef50_C6BV70 Transcriptional regulator, XRE family n=1 Tax=De... 52 3e-05 UniRef50_Q6MGU1 Putative uncharacterized protein n=1 Tax=Bdellov... 52 4e-05 UniRef50_C6IW30 Helix-turn-helix domain-containing protein n=1 T... 50 1e-04 UniRef50_Q2LVM8 Hypothetical membrane protein n=1 Tax=Syntrophus... 50 1e-04 UniRef50_C7LQ79 Transcriptional regulator, XRE family n=1 Tax=De... 50 1e-04 UniRef50_A5FX96 Uncharacterized protein-like protein n=1 Tax=Aci... 49 2e-04 UniRef50_A8TN86 Putative uncharacterized protein n=1 Tax=alpha p... 49 3e-04 UniRef50_Q3A2Z7 Putative uncharacterized protein n=1 Tax=Pelobac... 49 3e-04 UniRef50_Q13X27 Transcriptional regulator, XRE family n=26 Tax=B... 48 5e-04 UniRef50_B4AQD4 Helix-turn-helix domain protein n=18 Tax=Francis... 48 6e-04 UniRef50_A7HTY1 Putative uncharacterized protein n=1 Tax=Parviba... 48 6e-04 UniRef50_C6NWC2 Putative uncharacterized protein n=1 Tax=Acidith... 47 7e-04 UniRef50_C9S0F6 Transcriptional regulator, XRE family n=7 Tax=Ge... 47 9e-04 UniRef50_A1WXZ1 Transcriptional regulator, XRE family n=1 Tax=Ha... 47 0.001 UniRef50_Q21W27 Putative uncharacterized protein n=1 Tax=Rhodofe... 47 0.001 UniRef50_B9Z686 Transcriptional regulator, XRE family n=2 Tax=Ch... 47 0.001 UniRef50_Q31I06 Putative uncharacterized protein n=1 Tax=Thiomic... 46 0.002 UniRef50_B7RT19 Putative uncharacterized protein n=1 Tax=marine ... 46 0.002 UniRef50_A3VTC9 Putative uncharacterized protein n=1 Tax=Parvula... 46 0.002 UniRef50_Q1NPX4 Helix-turn-helix motif n=2 Tax=delta proteobacte... 45 0.003 UniRef50_B7A9Q8 PEGA domain protein n=1 Tax=Thermus aquaticus Y5... 45 0.003 UniRef50_B3R1K3 Putative transcriptional regulator yfgA; cro/C1-... 45 0.003 UniRef50_D0XYY9 Transcriptional regulator, XRE family n=1 Tax=Ca... 45 0.004 UniRef50_C1DD42 Transcriptional regulator n=1 Tax=Laribacter hon... 45 0.004 UniRef50_C9KPY7 Putative transcriptional regulator n=1 Tax=Mitsu... 45 0.005 UniRef50_A6SZX1 Uncharacterized conserved protein n=2 Tax=Oxalob... 45 0.005 UniRef50_Q1GSR3 Transcriptional regulator, XRE family n=1 Tax=Sp... 44 0.007 UniRef50_B9ZLM4 Transcriptional regulator, XRE family n=1 Tax=Th... 44 0.007 UniRef50_A0LDN4 Putative uncharacterized protein n=1 Tax=Magneto... 44 0.009 UniRef50_UPI0001788661 transcriptional regulator, XRE family n=1... 44 0.009 UniRef50_C8X3H6 XRE family transcriptional regulator n=1 Tax=Des... 44 0.010 UniRef50_B3DYX2 Predicted transcriptional regulator contains Xre... 44 0.010 UniRef50_Q2W6V6 Uncharacterized protein n=3 Tax=Magnetospirillum... 44 0.011 UniRef50_A0AIJ7 Complete genome n=3 Tax=Listeria RepID=A0AIJ7_LISW6 43 0.021 UniRef50_B6WRD8 Putative uncharacterized protein n=1 Tax=Desulfo... 42 0.034 UniRef50_C0X144 Transcription regulation protein n=22 Tax=Entero... 42 0.036 UniRef50_D2L1A7 Transcriptional regulator, XRE family n=1 Tax=De... 41 0.048 UniRef50_C1XSS0 Uncharacterized conserved protein n=2 Tax=Meioth... 41 0.074 UniRef50_B0THU0 Putative uncharacterized protein n=1 Tax=Helioba... 40 0.083 >UniRef50_B7LKC2 Cytoskeleton protein rodZ n=62 Tax=Enterobacteriaceae RepID=RODZ_ESCF3 Length = 338 Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust. Identities = 301/339 (88%), Positives = 306/339 (90%), Gaps = 3/339 (0%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEATHDQNEALTTG RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF Sbjct: 1 MNTEATHDQNEALTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV Sbjct: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 LFVVIGLSGAWWWQD KAQQEEITTMADQSSAEL++N QS+PL STTT P T P Sbjct: 121 LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNANGTNSQSIPLENSTTTVPEATPAP 180 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVD--TAATPAPTAATTPDGAAPL 238 A VDTTA N QTPA + PAP +PQQNAVV PSQANVD T A AP TTPD A PL Sbjct: 181 AAPVDTTA-NEQTPAASTPAPVTEPQQNAVVPPSQANVDTATTAPAAPATTTTPDTATPL 239 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 PTDQAGVTTP ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI Sbjct: 240 PTDQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 299 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ Sbjct: 300 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 338 >UniRef50_A7MGV6 Cytoskeleton protein rodZ n=51 Tax=Enterobacteriaceae RepID=RODZ_ENTS8 Length = 338 Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust. Identities = 253/345 (73%), Positives = 276/345 (80%), Gaps = 15/345 (4%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEATH++N TTG RLR AREQLGLSQQ VAERLCLKVSTVRDIEEDKAPADLASTF Sbjct: 1 MNTEATHEENAPHTTGERLRLAREQLGLSQQVVAERLCLKVSTVRDIEEDKAPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVH+PEEELLP L KQAP+R A+VAPMQ+++LGK RKKRDGWLM+FTWLV Sbjct: 61 LRGYIRSYARLVHVPEEELLPMLAKQAPVRTAQVAPMQTYALGKSRKKRDGWLMSFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPAT-TS 178 LFVV+GL+GAWWWQ+ KAQQEEI+TMADQSSAELS N+ QSVPLNT T D + + Sbjct: 121 LFVVVGLTGAWWWQNHKAQQEEISTMADQSSAELSQNAANSPQSVPLNTDNTADASQDQA 180 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDP------QQNAVVSPSQANVDTAATPAPTAATTP 232 TPPA D + +TQ A P P P QQ VV PSQAN DTAA TT Sbjct: 181 TPPA--DLPSGDTQNTASNNPQPTPVPSSNTASQQPVVVPPSQANTDTAA----QQNTTQ 234 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 + LP QA T P AD NALVMNFTADCWLEVTDATGKKLFSG+QRKD NLNL+GQA Sbjct: 235 PAQSQLPVGQAS-TAPAADANALVMNFTADCWLEVTDATGKKLFSGLQRKDTNLNLSGQA 293 Query: 293 PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 PY+LKIGAP+AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS Q Sbjct: 294 PYRLKIGAPSAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSVTQ 338 >UniRef50_C8Q4J6 Transcriptional regulator, XRE family n=8 Tax=Enterobacteriaceae RepID=C8Q4J6_9ENTR Length = 346 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 220/349 (63%), Positives = 260/349 (74%), Gaps = 20/349 (5%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEAT +++ +TG RLR AREQ+GL+QQ VAERLCLK+STVRDIEEDK+PADLASTF Sbjct: 1 MNTEATQEKSAVHSTGERLRLAREQMGLTQQNVAERLCLKLSTVRDIEEDKSPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVH+PE++LLP + KQAP+RAAK+ PMQSFSLGKRRKKRDGWLM FTWLV Sbjct: 61 LRGYIRSYARLVHVPEDDLLPMMAKQAPVRAAKIEPMQSFSLGKRRKKRDGWLMIFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +FVVIGL+GAWWWQ+ KA Q+E+ +MADQ+ + S NS QS+PL +++ A + Sbjct: 121 IFVVIGLTGAWWWQNHKASQDELVSMADQNGSNSSDNS---QSIPLGDNSSDASADADSN 177 Query: 181 PAS--VDTTATNTQTP--AVTAPAPAVDP-------------QQNAVVSPSQANVDTAAT 223 A VD A TP A PA A + NAVVSPSQA VDT Sbjct: 178 GAGTPVDNGAGAVATPDSATNTPAQASNAPAATSAPATATQGNDNAVVSPSQAPVDTTPP 237 Query: 224 PAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD 283 PA + A A LPT AGV+ +DPNALVMNF+ADCWLEVTDA+GKKLFSG+QR Sbjct: 238 PATSPAPANSVAGQLPTGGAGVSQASSDPNALVMNFSADCWLEVTDASGKKLFSGLQRSG 297 Query: 284 GNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 G L+L GQ PY+LKIGAPAAVQ+QYQ +PVDLSRFIR NQVARLT+ A+ Sbjct: 298 GKLSLAGQPPYRLKIGAPAAVQVQYQNQPVDLSRFIRNNQVARLTVGAQ 346 >UniRef50_C4UGF5 Uncharacterized HTH-type transcriptional regulator yfgA n=2 Tax=Enterobacteriaceae RepID=C4UGF5_YERRU Length = 302 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/318 (61%), Positives = 236/318 (74%), Gaps = 20/318 (6%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 RLR ARE LGL+QQ +AERLCLKVST+RDIEED A A+LASTFLRGYIRSYA+LV +PE+ Sbjct: 2 RLRQAREALGLTQQNIAERLCLKVSTIRDIEEDNAQANLASTFLRGYIRSYAKLVRLPED 61 Query: 78 ELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 ELLP L KQAP+RAAKVAPMQSFSLGK+RKKRDGWLM+FTWL++FVV+GL+GAWWWQ+ + Sbjct: 62 ELLPMLAKQAPIRAAKVAPMQSFSLGKKRKKRDGWLMSFTWLIVFVVLGLTGAWWWQNHQ 121 Query: 138 AQQEEITTMADQSSAEL--SSNSEQGQSVPLNTSTTTDPATTSTPPAS-VDTTATNTQTP 194 AQQ EI MADQSSA+L S NS QG ++ N + T P T S A+ V T AT T T Sbjct: 122 AQQAEIANMADQSSAQLSQSENSSQGAALTDNMTNTEVPLTDSHVAAAPVVTEATPTSTS 181 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A T P + VVSPSQA++ +TP AAPLPT A V+ Sbjct: 182 APT-------PTPSEVVSPSQASLPEVSTP----------AAPLPTADAVVSGTATPAGG 224 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 L MNF+ DCWL+V DATG+ LFSG+Q+K L+L G+APYKL IGAP AV IQYQG PVD Sbjct: 225 LAMNFSEDCWLQVIDATGESLFSGIQKKGATLSLAGKAPYKLTIGAPGAVTIQYQGNPVD 284 Query: 315 LSRFIRTNQVARLTLNAE 332 LS+F+++++VARLT+ AE Sbjct: 285 LSKFVKSSRVARLTVGAE 302 >UniRef50_B1JS04 Cytoskeleton protein rodZ n=32 Tax=Enterobacteriaceae RepID=RODZ_YERPY Length = 368 Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust. Identities = 206/371 (55%), Positives = 242/371 (65%), Gaps = 42/371 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEA+ DQ T G RLR ARE LGL+QQ VAERLCLKVST+RDIEED A A+LASTF Sbjct: 1 MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGYIRSYA+LVH+PE+ELLP LEKQAP+RAAKVAPMQSFSLGK+ KKRDGWLM+FTWL+ Sbjct: 61 HRGYIRSYAKLVHLPEDELLPILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLI 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + VV+GL+GAWWWQ+ +AQQ EI M DQSSA+LS N GQ VPL T +D + Sbjct: 121 VLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNG--GQPVPL-TDDNSDAIAPTDA 177 Query: 181 PASVDTT----ATNTQTPAVT------------------------APAPAVDPQQNAVVS 212 PA V TN T AVT P + P+ N+ Sbjct: 178 PAPVANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTTLVPKTNSTEP 237 Query: 213 PSQANVDTAAT--PAPTAATTPDGA---------APLPTDQAGVTTPVADPNALVMNFTA 261 AN +T A +AA +P PLPT AGV+ + ALVMNFTA Sbjct: 238 VDTANTNTTMHQEGAASAAVSPSQVPQLGMPTDQPPLPTADAGVSGSASSVGALVMNFTA 297 Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 DCWL+V DATGK LFSG+Q+ LNL G+APYKL IGAP A+ I YQG PVDLS+FI+ Sbjct: 298 DCWLQVVDATGKTLFSGIQKGGAVLNLAGKAPYKLTIGAPGALTISYQGNPVDLSKFIKA 357 Query: 322 NQVARLTLNAE 332 N+VARLT+ E Sbjct: 358 NRVARLTVGVE 368 >UniRef50_C6CAL7 Transcriptional regulator, XRE family n=1 Tax=Dickeya dadantii Ech703 RepID=C6CAL7_DICDC Length = 323 Score = 333 bits (854), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 181/341 (53%), Positives = 225/341 (65%), Gaps = 26/341 (7%) Query: 1 MNTEATHDQNEA--LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 MNTEAT D + +T G RLR AREQLGL+QQ VAERLCLK++TVR+IE++ PA LA Sbjct: 1 MNTEATQDNTASTTVTPGERLRQAREQLGLTQQVVAERLCLKLTTVREIEDNNTPAGLAP 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQA-PLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TFLRGYIRSYA+LVHIPEEELLP LEK P R + VA M +LGK RKKRDGWLM FT Sbjct: 61 TFLRGYIRSYAKLVHIPEEELLPMLEKHVVPSRTSTVAAMPGTALGKTRKKRDGWLMMFT 120 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 WL+L V+GL+ AWWWQ+ +AQQ EI +M + ++A S Q +T T+DP Sbjct: 121 WLILLGVLGLTVAWWWQNHQAQQREINSMVEHANAPQSGKMVQ------DTDGTSDPEPV 174 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDP-----QQNAVVSPSQANVDTAATPAPTAATTP 232 T + TA+ +V A V P AVV+PSQA+V P Sbjct: 175 DTEDNNAGDTASRIPETSVAAAGMPVQPAAGDTSARAVVAPSQASVQ------------P 222 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 + T A PN+++M F+ADCWLEV DATGKKLFSG+QR G LNL GQ Sbjct: 223 LLSPAAVAPATATATDAAAPNSVIMRFSADCWLEVVDATGKKLFSGVQRSGGVLNLVGQP 282 Query: 293 PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 PY+LKIGAP AVQ+++QGKPVDLSRF++++QVAR+TL+ +Q Sbjct: 283 PYRLKIGAPGAVQVEFQGKPVDLSRFVKSHQVARITLSEQQ 323 >UniRef50_D2TXC4 DNA-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TXC4_9ENTR Length = 342 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 151/353 (42%), Positives = 203/353 (57%), Gaps = 38/353 (10%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN++ ++ E +T G RL ARE LGLS++ VAERLCLKV TVR+IEED + TF Sbjct: 1 MNSKPKTEKTE-ITVGQRLLQARETLGLSREIVAERLCLKVCTVREIEEDSNSHSVDPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYA+LV IPE+E+L L+K P +AA V+PMQS+SLGK RKKR+GWLM FTWL+ Sbjct: 60 LRGYIRSYAKLVKIPEKEILELLDKHTPAKAAVVSPMQSYSLGKTRKKREGWLMKFTWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + + I + G WWWQ K Q++EI TMA+Q N +P + ++T + Sbjct: 120 IIICIAMVGIWWWQGYKVQKQEIATMAEQ-------NRSNAIQIPSDPPSSTAGTANAIE 172 Query: 181 PASVDTTATNTQTPAVT--------APAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 +V+T++T T P VT +PAP P + + S NV+T + PT T Sbjct: 173 QNNVNTSSTETSIPPVTSAIANNVISPAPQ-SPLTSETLKNSDKNVNTESV-NPTEVKT- 229 Query: 233 DGAAPLPTDQAGVTTP----------------VADPNALVMNFTADCWLEVTDATGKKLF 276 PLP + P + + +VMNF CWLEV DA GK LF Sbjct: 230 ---VPLPGSMTNNSHPERSRAEETPADTDAASLESDDGIVMNFKGQCWLEVRDAKGKILF 286 Query: 277 SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 SGM+ L L G+ PY+ IG PA V + ++G VDL+RFI+ N+ A+ L Sbjct: 287 SGMKNAGQKLELNGEPPYEFNIGIPANVNLLFKGNSVDLNRFIKANRPAKFKL 339 >UniRef50_D1P3Q8 Putative membrane protein n=3 Tax=Providencia RepID=D1P3Q8_9ENTR Length = 324 Score = 273 bits (699), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 151/336 (44%), Positives = 201/336 (59%), Gaps = 28/336 (8%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 NTE T ++T G L ARE+ GL+Q+ VAERLCLKVSTV++IE+D PA + TFL Sbjct: 6 NTEQT-----SITVGQVLSQARERKGLTQEMVAERLCLKVSTVKEIEQDIHPAGVEPTFL 60 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RGYIR YAR+V +PE E+ L+ AP + + V+PMQS+SLGK+RKKR+GWLM TWL++ Sbjct: 61 RGYIRLYARMVGLPESEISVFLKTDAPAQVSNVSPMQSYSLGKKRKKREGWLMKITWLIV 120 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 ++I + G WWWQD AQ+++ TMA ++ LS Q V T+PA + P Sbjct: 121 IILIAMVGIWWWQDHNAQKKDFITMATENDLILSQQDNSSQPV-----APTNPAMIA--P 173 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT---PAPTAATTPDGAAPL 238 + + A QT +VT P + Q +P N D A P P A P A+ + Sbjct: 174 LATENGA--VQTSSVTGELPVLSDNQE---TPIAGNADAQAVRTIPLPNA---PQTASSV 225 Query: 239 PTDQAGVTT-----PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAP 293 QA +T P A+ LV+NF+ CWLE+ DA K LFSGM+ L L G P Sbjct: 226 DRAQANASTESTDMPAANTTGLVLNFSGQCWLEIRDANNKVLFSGMKNGGDKLELDGSQP 285 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 Y+L IGAPA V +Q+QGK VDLSRFI+ + A+ TL Sbjct: 286 YRLNIGAPANVAVQFQGKDVDLSRFIKAKRSAKFTL 321 >UniRef50_B2Q0X0 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0X0_PROST Length = 314 Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/317 (44%), Positives = 190/317 (59%), Gaps = 17/317 (5%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 +T G L ARE++GL+Q++VAERLCLKVSTVR+I+ED PA + TFLRGY+R YAR+V Sbjct: 12 ITVGKLLSQARERMGLTQESVAERLCLKVSTVREIDEDVKPAGVEPTFLRGYMRLYARMV 71 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 ++PE EL L+ P+ A+ V+ MQS+SLGK+RKKR+GWLM TWL++ V+I + G WW Sbjct: 72 NVPESELNALLKNDEPIAASTVSSMQSYSLGKKRKKREGWLMKLTWLIVIVLIAMVGIWW 131 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 WQD + QQ E TMA+Q+ +S +E G V L+ +T P TS T T Sbjct: 132 WQDHQKQQNEFVTMANQNDLLISQQNESGNPVELSNGSTETPTNTS-------ETGEGTL 184 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 A A P ++ V P P + T + + V TPV Sbjct: 185 VDLNAAQATENQPIESLPVK---------TVPLPNSPNTTVSVDRTQSTEEPVATPVVQ- 234 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 +AL M+F CWLEV DA K L+SG++ L+L G+ PY+L IGAPA V I++ G Sbjct: 235 DALTMSFKGSCWLEVRDANNKVLYSGIKNSGDTLDLQGKLPYRLNIGAPANVDIKFNGNV 294 Query: 313 VDLSRFIRTNQVARLTL 329 VDLSRFI+ N+ A+L + Sbjct: 295 VDLSRFIKANRSAKLKI 311 >UniRef50_C2LI02 Helix-turn-helix DNA-binding domain protein n=3 Tax=Proteus RepID=C2LI02_PROMI Length = 320 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 148/339 (43%), Positives = 207/339 (61%), Gaps = 32/339 (9%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTE ++ + LT G LR ARE+ GL+QQ VA+RLCLK++TV +IE D + +A TF Sbjct: 1 MNTENKTEEVK-LTAGQLLRQAREKAGLTQQTVADRLCLKLTTVCEIEADTISSGIAPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGY+RSYA+LV +PE +L +++QAP++ KV Q++SLGKR KKR+GWLM TW++ Sbjct: 60 LRGYMRSYAKLVGVPESAILGLIDQQAPIKQVKVTTTQNYSLGKRHKKREGWLMKLTWVI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT--S 178 + +I L G WWWQ +A Q+E+ +MA Q ++ NS Q NT+T P +T + Sbjct: 120 VIAMIALVGLWWWQGHQADQQELVSMASQ---DIGQNSPQE-----NTNTIESPLSTLDN 171 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 P+S N Q PA +P VD Q N V PS T ATP T P +PL Sbjct: 172 NSPSS---EGENVQVPA----SPLVDNQANKVAEPSV----TDATPEAEVKTVPLPVSPL 220 Query: 239 PT------DQA-GVTTPV-ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 T D A G +TP N LV+ F +CWLE+ +A K LF+G+++ L G Sbjct: 221 TTSTTSRADSAEGNSTPAPIVENQLVLMFDGECWLEIRNAQNKVLFNGIKKAGDRLEFNG 280 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + PYKLKIGAP+ ++Q+ G+ VDLSRF T ++A++T+ Sbjct: 281 EQPYKLKIGAPSVTRLQFNGEAVDLSRF--TGKIAKITV 317 >UniRef50_B8K783 Integral membrane protein n=4 Tax=Vibrio RepID=B8K783_VIBPA Length = 314 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 165/318 (51%), Gaps = 20/318 (6%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 A+ G L+ REQLGLSQ+ +A+RL L+VS + IE ++ DL +TF +GY+RSYA+ Sbjct: 16 AVEAGTLLKQKREQLGLSQKQIADRLRLRVSIIESIESNQFTTDLVATFTKGYLRSYAKA 75 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 V + E E+L + + + PMQSFS +R+K D +M TW +L V++G+S W Sbjct: 76 VGLDESEVLAAYAQHNKVETEE-QPMQSFSRQTKREKHDSRIMIITWGILLVIVGISSVW 134 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 WWQ++++ ++T E++ + + N T PA+ P +T Sbjct: 135 WWQNQQSSIVDLT--------EVTEQELELEQQLENAQMTELPASI-IPEVDHETELNVA 185 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + P + P V P+ VDTA A TP + + P Sbjct: 186 EEPNLQEPVAEV---------PASETVDTAQETAQQEQVTPAEEIAEVAEPVEESVPQVA 236 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 N LVM F DCW++V D +GK + +G+++ L L+G+ PYKL +GAP V + + Sbjct: 237 ANLLVMTFEGDCWIQVKDKSGKTVSTGVKKAGETLELSGELPYKLVLGAPENVSMTLASE 296 Query: 312 PVDLSRFIRTNQVARLTL 329 PVDLS + + +VAR TL Sbjct: 297 PVDLSGYT-SGKVARFTL 313 >UniRef50_A6AQ33 Integral membrane protein n=14 Tax=Vibrionales RepID=A6AQ33_VIBHA Length = 318 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 172/332 (51%), Gaps = 42/332 (12%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 ++ G L+N RE LG++Q+ VA+RL L+VS + DIE ++ +TF RGY+RSYA+L Sbjct: 13 SMEAGTLLKNKRESLGMTQKHVADRLRLRVSVIEDIENNRFEEQQVTTFTRGYLRSYAKL 72 Query: 72 VHIPEEELLPGLEKQAPLRAA-KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 V + E+ +L LE+ + + + MQSFS + +K + +M TW + V+ G+SGA Sbjct: 73 VGLDEKIVLAALEQTSEVHVKPQETEMQSFSRKTKHEKHNSRIMLLTWAIAIVITGISGA 132 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTST---TTDPATTSTP----PAS 183 WWWQ+ QQE S A+LS+ + + + V + + D STP PAS Sbjct: 133 WWWQN---QQE-------NSLAQLSAETAETEQVADDADIDQMSADELIASTPAEIAPAS 182 Query: 184 ----VDTTATNTQTPA--VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 V + A T + A VT P A + + A P D P A P+G Sbjct: 183 AALTVVSEADTTMSAAGDVTEPVVAAEVTEEAAQEPVAVIEDAQEAEEPAAPVVPEGM-- 240 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 L M F ADCW++V DA GK L SG ++ ++ L G+AP+K+ Sbjct: 241 ---------------TLLTMKFKADCWIQVKDANGKTLVSGTRKPGQDVELAGKAPFKVI 285 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +GAP V + + +PVDLS + + +VAR TL Sbjct: 286 LGAPEGVTMTFASEPVDLSGYT-SGKVARFTL 316 >UniRef50_A0KJ43 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KJ43_AERHH Length = 312 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 130/335 (38%), Positives = 177/335 (52%), Gaps = 26/335 (7%) Query: 1 MNTEATHD---QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M TE HD ++A+ G LRNAREQLG +++ VA R+ L+++ + IE D + Sbjct: 1 MTTEQPHDFQDDSQAVGPGQLLRNAREQLGWTREQVASRIHLRLTLIAAIESDTYDKHTS 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TF+RGY+R+YA+LV IPEE +L +K L MQSFS R++ D L T Sbjct: 61 HTFIRGYLRTYAKLVGIPEETILAAYDKLG-LTPPDNIDMQSFSRRSRQQANDSRLKVVT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 WLV+ V+I LS AWWWQ S+A S+ E + + ++ T AT Sbjct: 120 WLVILVLIALSVAWWWQ---------------STARRSAGDEALAATEMGATSNTPSATV 164 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 PPA VD A A + DP +A + + VD ++ A TA T A Sbjct: 165 --PPA-VDVADPVVAPATSAAAATSADPVVSA--AATTLPVDASSAVATTAVATSAATAT 219 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 P + P P L M+FTADCWL+V DA GK LFSG+++ + L L G P K Sbjct: 220 QPAADTAASEPAKVPQ-LKMSFTADCWLDVKDAKGKTLFSGLKKANDELVLEGPEPLKFI 278 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 IGAP AV I+YQGK +D+SR+ + ARL+L E Sbjct: 279 IGAPMAVNIEYQGKSIDMSRY-NNGRTARLSLPQE 312 >UniRef50_Q5E773 Integral membrane protein n=3 Tax=Aliivibrio RepID=Q5E773_VIBF1 Length = 304 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 117/338 (34%), Positives = 180/338 (53%), Gaps = 45/338 (13%) Query: 1 MNTEATHDQNEALTT-GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M TE + E G L+ AR++L L+ + ++ RL L+V + IE D+ +T Sbjct: 1 MTTEHIEETVETFIAPGLLLKEARKELNLTLEDISSRLRLRVEVLEQIEADQFDMGKLAT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F RGY RSYA++V++PE+++L L++ + + MQSFS +R K D +M TW+ Sbjct: 61 FTRGYYRSYAKVVNVPEQKVLDALDQLGKAQIEQ-HDMQSFSRKTKRDKHDNRIMKLTWV 119 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD-PATTS 178 + +++G+S WWWQ++ AQ E + AEL + E +S+ TD P T Sbjct: 120 IFALILGMSVLWWWQEQ-AQLE------SANDAELIAEVETAKSMEQVEENKTDAPQTEE 172 Query: 179 TPPA-------SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 T P +DT + +T + T + + S+A V+ P A Sbjct: 173 TAPTLDEAEMLQLDTNISELETDSKTL--------EKETIKESEAPVEIKK-EEPVA--- 220 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 ++A VT V VM F++DCWL+V DA+ +L+SG+++ + L LTG+ Sbjct: 221 ---------EKAVVTEDV------VMTFSSDCWLQVQDASNNRLYSGVKKSNQTLKLTGK 265 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 APYKL IGAP+AV + Y+GKPVDLS + +VARLTL Sbjct: 266 APYKLVIGAPSAVTLTYKGKPVDLSVY-PAGKVARLTL 302 >UniRef50_Q1ZRE7 Hypothetical DNA-binding protein n=4 Tax=Photobacterium RepID=Q1ZRE7_PHOAS Length = 338 Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 123/335 (36%), Positives = 180/335 (53%), Gaps = 26/335 (7%) Query: 1 MNTEATHDQNEALTT---GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNTE +Q T G LR AREQLG SQ+ +A RL L++S + +IE ++ Sbjct: 1 MNTENNEEQKITEGTQLPGDVLRQAREQLGYSQKDIANRLRLRLSVIDNIENNRFDQAQL 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +TF RGY+RSYA+ V + EE +L L+K + K MQSFS +R+ D +M T Sbjct: 61 ATFTRGYVRSYAKYVGLEEEAVLVLLDKCGHTKP-KAQEMQSFSRRTKREAHDSRIMGLT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEI--TTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 W++ V +G++ WWWQ+ +Q + TT ADQ+ A EQG + T+ D A Sbjct: 120 WILAAVFVGVTAVWWWQNIHLEQAPVATTTTADQTVAH--EKQEQGSDDTIVTTLNGDDA 177 Query: 176 TTS-TPPASVDT---------TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA 225 + S T P +VDT T NT +A A A + + + + TPA Sbjct: 178 SISATQPTTVDTDVDHSAPISTEQNTAASTTSADAATDSSPTTASTTATGTTTEASTTPA 237 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNA--LVMNFTADCWLEVTDATGKKLFSGMQRKD 283 A T TPV D A L + F+ADCW++V DATGK+L SG+++ Sbjct: 238 ENAETASTSVT------TATATPVVDATAPQLQLKFSADCWIDVRDATGKRLESGIKKAG 291 Query: 284 GNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318 L+L G+AP+++++GAP+AV+I +G+P DLSR+ Sbjct: 292 QVLDLEGKAPFRVRLGAPSAVKINIKGQPFDLSRY 326 >UniRef50_C9P6C4 Putative uncharacterized protein n=2 Tax=Vibrio RepID=C9P6C4_VIBME Length = 303 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 30/314 (9%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G L+ RE LGLSQ+ VA+RL L+V+ +R+IE+++ +DL +TF RGY+RSYA+ V + Sbjct: 19 GTLLKQKRETLGLSQKQVADRLRLRVAIIRNIEDNQFDSDLVATFTRGYLRSYAKAVGLS 78 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 E++ E + + MQSFS +R + D +M TW+++ V+IG+S WWWQ+ Sbjct: 79 VAEVVESYEVHY-VTGPQEQRMQSFSRKNKRAQHDSRIMLITWVIVLVIIGMSSLWWWQN 137 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 Q +T+ +++SS + Q S + DP P S D T N + A Sbjct: 138 N--QHNNLTSSSERSSLITEQTNPQ--------SASADPILDQLPTVS-DLTVGN-EVSA 185 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 V P ++ V P A P+ T ATT + P+ D++ N L Sbjct: 186 VEQAEEEESPVNDSRVEPI-----LEAEPSITPATTEN--TPVNADES---------NLL 229 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 M F+ADCW++V DATGK L +G+++ ++N+ G+ P + +GAP V + + +PVDL Sbjct: 230 SMTFSADCWIQVKDATGKTLSTGVKKAGQSINVRGETPISVILGAPEGVSVTFASEPVDL 289 Query: 316 SRFIRTNQVARLTL 329 S + + +VAR TL Sbjct: 290 SGYT-SGRVARFTL 302 >UniRef50_D0I7P6 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7P6_VIBHO Length = 307 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 115/329 (34%), Positives = 175/329 (53%), Gaps = 44/329 (13%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE +GLS Q VA+RL L+VS ++D+EE+ + +TF RGYIRSY++LV + +E Sbjct: 3 LREAREAIGLSDQDVADRLRLRVSVIQDLEENCCDDEKVTTFTRGYIRSYSKLVGLNADE 62 Query: 79 LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 LL + + MQSFS RR + D +M TW++L +VIGL+ WWWQ++ Sbjct: 63 LLSTFNPVTDVEDS-TQKMQSFSRKTRRDQHDSRVMGLTWVILAIVIGLTAFWWWQNQ-- 119 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPL---------NTSTTTDPATTSTPPAS------ 183 Q + + ++ + S +SS +E + +T + A ++ PAS Sbjct: 120 QNDLLLSLPESSGLSMSSTTEAAPATEAAPAVAKTDDDTRQSASVAKSTDAPASAPDVMT 179 Query: 184 ---VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 DT NT P VT P V +Q V+ P P P AA D A Sbjct: 180 REPTDTLVENT-APDVTDAEP-VAAEQVDVIEP----------PQPEAAVVEDVAV---- 223 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 TPV + + ++F+ DCW+++ DA+GK+L +G++ + L+G AP+ L +GA Sbjct: 224 ------TPVTASSNMTLSFSGDCWVDIRDASGKRLLTGIKSSGETVELSGDAPFSLVLGA 277 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 P AV + Y G+ VDLS + + +VARL+L Sbjct: 278 PTAVNLVYNGEQVDLSGY-PSGRVARLSL 305 >UniRef50_C9NQN4 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NQN4_9VIBR Length = 330 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/321 (33%), Positives = 171/321 (53%), Gaps = 16/321 (4%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G L+ RE+LGL+QQ VA+RL L+ S + +IE ++ ++ +TF RGY+RSYAR+V I Sbjct: 18 GTILKQKREELGLTQQQVADRLRLRRSIIENIELNQFESEQVATFTRGYLRSYARVVGIK 77 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 E +L L+ + + MQSFS ++K D +MT TW + +++G+S WWWQ+ Sbjct: 78 ESVVLCALDDCGEAQHEE-HEMQSFSQKTNKEKHDSRIMTLTWGIFAIIVGISSVWWWQN 136 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS--VDTTATNTQT 193 ++ E+TT +Q E+ E ++ L+ + +P V+ T Sbjct: 137 QENSAVELTTATEQ---EMKIEQELAENDELDFAAVEPSLINESPEGQQVVEQPLEEVTT 193 Query: 194 PAVTAPA-PAVDPQQNAVV----SPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 P TA A P + Q VV P++ V T P A P+ P + ++ Sbjct: 194 PVETATAEPEIVEQPTEVVQAITEPAEPEVVTEPVTEPVVAAEPNQ----PEKETENSSE 249 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 N L M+F+ DCW++V DATGK L +G+++ +L ++G+ PY + +GAP V + Sbjct: 250 PVVANLLEMSFSDDCWIQVKDATGKTLATGIKKAGQDLQVSGERPYNVILGAPENVSMTL 309 Query: 309 QGKPVDLSRFIRTNQVARLTL 329 +PVDLS + + +VAR TL Sbjct: 310 SSEPVDLSGYT-SGKVARFTL 329 >UniRef50_Q6LU50 Hypothetical DNA-binding protein n=1 Tax=Photobacterium profundum RepID=Q6LU50_PHOPR Length = 311 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 114/328 (34%), Positives = 172/328 (52%), Gaps = 37/328 (11%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE+LG SQ+ +A RL LK+S + +IE++ +TF RGY+ SYA+ V + E+E Sbjct: 2 LRQAREKLGYSQKDIASRLRLKLSVINNIEDNIFEESQVATFTRGYVCSYAKYVGLNEKE 61 Query: 79 LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 +L L+ + K MQSFS +R+ D +M TW V ++IGL+ AWWWQ + Sbjct: 62 ILAKLDLLGHAQP-KEQTMQSFSRRTKREAHDSRIMGITWGVAAIIIGLTAAWWWQ---S 117 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 +Q E T S+ELS ++ + S +DP T + ++ A T VTA Sbjct: 118 EQLESGTDLSTVSSELSQPLDE----SIANSDLSDPTITGISASDINAAAEGT---VVTA 170 Query: 199 PAP--------------AVDPQQNAVVSPS---QANVDTAATPAPTAATTPDGAAPLPTD 241 P AVD + ++ +PS A D + A A+ +A D Sbjct: 171 SEPETVLSATNDSDLISAVDDEV-SISNPSTVINAGSDNDSFVAEQASDVISESAESTED 229 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A V+ L ++F DCW++V DA GK+L +G+++ LNL G AP+K+ +GAP Sbjct: 230 GAIVSD-------LKLSFAGDCWIDVRDANGKRLDTGIKKTGDVLNLNGAAPFKVVLGAP 282 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTL 329 V++ Y+G+PVDLS + +VAR L Sbjct: 283 GVVEMTYKGEPVDLSVY-PAGKVARFKL 309 >UniRef50_C4LC36 Transcriptional regulator, XRE family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LC36_TOLAT Length = 343 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 126/349 (36%), Positives = 180/349 (51%), Gaps = 30/349 (8%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M TE H+ + LT G L+ AREQ GLSQQ VA RL L++S +RDIEED+ ASTF Sbjct: 1 MTTEQRHETAQ-LTPGTILKTAREQRGLSQQDVAHRLNLRISLIRDIEEDRFDQKTASTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+++YAR V EE ++ + L K + M SFS +R+ + + +W++ Sbjct: 60 TRGYLKTYARFVGANEEAVVAAYDGLG-LDDKKYSEMYSFSGRTQREASEHRVRLISWVL 118 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSS---------AELSSN------SEQGQSVP 165 +IGL G WWW + +E + T +++ A L+ N S +S+P Sbjct: 119 CIGLIGLGGTWWW--LQPTEEPVPTSINEAGQLVVKAVNEAALAVNPVSSATSVATESLP 176 Query: 166 LNTSTTTDPATTSTPPASVDTTATNT---QTPAVTAPAPAVDPQQNAVVSPSQANVDTAA 222 + T ++S PAS D N Q P V AVD + + Q+ V A Sbjct: 177 VPTIPDVMNTSSSAVPASADVAEENDTEGQAPTVLTDT-AVDAE-----AQEQSAVVPAP 230 Query: 223 TPAPTAATTPDGAAPLPTDQAGVTTPVA-DPN-ALVMNFTADCWLEVTDATGKKLFSGMQ 280 A AAT+ + + T + T VA DP+ AL + F CWL VTDATGK + G + Sbjct: 231 MVAAVAATSAAASTAVSTAASTEETAVAVDPSVALQLQFKETCWLRVTDATGKSILEGTK 290 Query: 281 RKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 ++L+G+ P+ L IGAP AV I + G+ VD+S +IR VAR L Sbjct: 291 NAGDKISLSGKEPFSLTIGAPRAVSIYFHGQEVDMSSYIRQGVVARYKL 339 >UniRef50_B0TLI3 Putative uncharacterized protein n=2 Tax=Shewanella RepID=B0TLI3_SHEHH Length = 327 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 16/317 (5%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 LT G L+ ARE GLS +A+A +L L+ + +++IE D A A+T++RGY+++YAR V Sbjct: 22 LTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADNLQAVGAATYVRGYVKNYARAV 81 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 + L+KQ L + + MQSFS + RDG LM T++++FV++GL WW Sbjct: 82 QADPFTVQECLDKQ--LESEEKPSMQSFSRKTTHQARDGRLMALTYIIVFVLLGLMVLWW 139 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 +Q K+ + + ++ E+++++E G + P+ D + V+ A++++ Sbjct: 140 FQ--KSSMDSAVDYSQPTAEEVAASAEVGLANPI------DALLVDNSDSGVEQMASSSE 191 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 PA +A + A Q+A + S T +PA T AT P P A V Sbjct: 192 EPAESAVSTA----QDAPTAASNEQSQTTQSPAATQATEPAQIEPNAQASAESEDKVLG- 246 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 + L ++ T DCW++VTD G L S +++ +NL G P+ + +GAP V IQ GK Sbjct: 247 STLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGAEPFSVTLGAPQVVNIQLNGKS 306 Query: 313 VDLSRFIRTNQVARLTL 329 + L ++ + +VA++TL Sbjct: 307 ISLDQY-PSGKVAKMTL 322 >UniRef50_A6ADB9 Integral membrane protein (Fragment) n=34 Tax=Vibrio RepID=A6ADB9_VIBCH Length = 325 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 112/324 (34%), Positives = 167/324 (51%), Gaps = 41/324 (12%) Query: 3 TEATHDQN----EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 TE T N E + G L+ RE LGL+Q+ +A+RL L++S ++ IEE++ + Sbjct: 11 TETTEQLNQPAIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVA 70 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 TF RGY+RSYA+ V I E E+L + + M+SFS +R+ D +M TW Sbjct: 71 TFTRGYLRSYAKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITW 130 Query: 119 LVLFVVIGLSGAWWWQDRKAQQ--EEITTMAD------QSSAELSSNSEQGQSV-PLNTS 169 ++L V++G+S WWWQ+ + + TT+A QSS + S +E +V PLN Sbjct: 131 VILAVIVGMSTLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDTSLANEDFATVPPLNEL 190 Query: 170 TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA 229 PA+ P + + + + +T PAP A V + V+ AT AP A Sbjct: 191 QDAAPASEEAP---MSQESLSGEASELTPPAP-----NEADVVTDKPVVEETAT-APVAP 241 Query: 230 TTPDGAAPL----PTDQAGVTTPVADPNA---------------LVMNFTADCWLEVTDA 270 P G P+ P A VT P A P+A LVMNF+ADCW++V DA Sbjct: 242 AQPQGQTPVQSQAPVAAAPVTQPEAAPSAPSQPVSSSTESASALLVMNFSADCWIQVKDA 301 Query: 271 TGKKLFSGMQRKDGNLNLTGQAPY 294 TGK L +G+++ +++L+GQ PY Sbjct: 302 TGKTLSTGVKKAGQSVSLSGQRPY 325 >UniRef50_UPI0001A447F2 hypothetical protein PcarcW_15601 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A447F2 Length = 187 Score = 153 bits (387), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 69/85 (81%), Positives = 77/85 (90%) Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 PV+ +ALVM FTADCWLEVTDA+GKKLFSGMQR G LNL GQ+PYKLKIGAPAAVQIQ Sbjct: 103 PVSAAHALVMTFTADCWLEVTDASGKKLFSGMQRNGGTLNLDGQSPYKLKIGAPAAVQIQ 162 Query: 308 YQGKPVDLSRFIRTNQVARLTLNAE 332 +QGKPVDLSRF+R++QVARLTL AE Sbjct: 163 FQGKPVDLSRFVRSSQVARLTLTAE 187 >UniRef50_A6FA10 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FA10_9GAMM Length = 327 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/315 (30%), Positives = 152/315 (48%), Gaps = 30/315 (9%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + +T G L++AR G+S Q V + LK+S + +IE+ A ++STF+RGYIR YAR Sbjct: 22 DVVTAGQMLQDARIASGISVQEVCNHIHLKLSVINNIEQSVADKQISSTFMRGYIRCYAR 81 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + I E+E++ + Q + + +QSFS + + D LM ++ ++ ++ + Sbjct: 82 YLKISEDEVITAYDGQN-VACEQQTELQSFSCRTKLEAHDNRLMLVSYGIIGFMLAVFLI 140 Query: 131 WWWQDRKAQQ----EEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 W D E I T +S ++ EQ PL + + P ST S + Sbjct: 141 WGLGDDVDVDVVVPEPIITQTIESVGAVTVIEEQA---PLVVAES--PEFDSTEFESTEL 195 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATP---APTAATTPDGAAPLPTDQA 243 +T QTPA+ AP P V P++ A P +P TPD Sbjct: 196 DSTVAQTPALDVIAP---PSSEVV--PAEVLAHVTALPTITSPVVTNTPDNK-------- 242 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 P +LV+ F DCW++V D GK L +G+++ +++L G AP +K+GAP Sbjct: 243 ----PAIVAQSLVLTFAGDCWIQVKDKNGKTLSTGVRKAGQSISLQGLAPLSIKLGAPEY 298 Query: 304 VQIQYQGKPVDLSRF 318 V + Y G+ VDLS F Sbjct: 299 VTMSYAGESVDLSTF 313 >UniRef50_B8CKR0 DNA-binding protein, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKR0_SHEPW Length = 336 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 46/348 (13%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 ++TE+ D+ LT G L+ ARE G S + +A +L L+ + +R+IE D A+T+ Sbjct: 11 IDTESLVDE-PTLTLGVLLKKARENKGASVEDIAAQLHLRPAIIREIEADNLLEIGAATY 69 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +RGY+++YAR V E+ L+KQ L + MQSFS + RDG LM T+++ Sbjct: 70 VRGYVKNYARAVQADPFEVQTCLDKQ--LLNDEQPSMQSFSRKTTHQARDGRLMALTYII 127 Query: 121 LFVVIGLSGAWWWQDRKAQ--------------QEEITTMADQSSAELSSNSE-----QG 161 +FV++ L WW+Q + M D+S NSE Q Sbjct: 128 VFVLLALMVLWWFQKSSMETTVDYSQPTVEEVAASAEEAMYDESLI----NSEAALAAQS 183 Query: 162 QSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTA 221 ++PL+ D A N T A V ++ + ++A+ + Sbjct: 184 NNIPLDERIVETIG---------DDVADNNSTEQYIASNQDVTSEEQPELQVAEASSQVS 234 Query: 222 ATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQR 281 A A A+ D +D VT+ AL++ + DCW++VTDA G L G+++ Sbjct: 235 A--AQLLASMVDSQDNDTSD--AVTS------ALMLTLSGDCWIKVTDANGNTLIDGLKK 284 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 ++N+TG P+ + +GAP V IQ G V L ++ + +VAR +L Sbjct: 285 SGRDINVTGAEPFAVILGAPQVVNIQLNGTQVSLDQY-PSGKVARFSL 331 >UniRef50_A1S864 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S864_SHEAM Length = 340 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 110/348 (31%), Positives = 170/348 (48%), Gaps = 31/348 (8%) Query: 1 MNTEAT--HDQNEALTT---GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 MN E T ++ EA T G L+ ARE G+S VA L L+ S V+D+E D Sbjct: 1 MNEELTPSSEEQEAPATESLGQILKAAREAKGMSVADVATALHLRPSVVKDLEADDFSNI 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 ++T++RGYI+++AR+V ++++ L Q P MQSFS R+ RD + Sbjct: 61 SSATYIRGYIKNFARIVEADKQKVEACLASQVP--GVSQPAMQSFSRKTVRQARDKRYLM 118 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQ-----------EEITTMADQSSAELSSNSEQGQSV 164 T+LV+ +++ L WW Q K EE+ A Q+S + G Sbjct: 119 LTYLVILILVALLVFWWLQTSKFFNTAAVDFSKPTAEEVAA-AGQTSIQDDLMQRLGNET 177 Query: 165 PLNTSTTTDPATTSTPPASVDTTATNTQTPAVT---APAPAVDPQQNAVVSPSQANVDTA 221 T+ P T + SV++ VT A P+ N+ V + +++ Sbjct: 178 HTQAGTSPQPDTEAAYEQSVNSDDMPVAAQEVTVGSAEEPSAQQDNNSAVDTTASDMREI 237 Query: 222 ATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQR 281 T A A TP+ A +P TP +ALVM+F+ADCW++V DATGK L S +++ Sbjct: 238 DTRASNAEATPEVTASIPA------TP--GQSALVMSFSADCWVQVKDATGKVLVSDLRK 289 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +NL+G+AP+ +GAP AV++ G+ L F + +VAR +L Sbjct: 290 AGQTINLSGKAPFSFILGAPQAVKLSINGEAASLDEFPK-GRVARFSL 336 >UniRef50_Q47WB9 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WB9_COLP3 Length = 330 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 39/331 (11%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 +D E L+ GA L AR+ L LSQ+ ++ +L LKV+ V++IE+D + TF RGY+ Sbjct: 27 NDYIEVLSPGAMLSEARKALSLSQEFISSKLNLKVALVQNIEDDIFDPSMPVTFNRGYLA 86 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKV--APMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +YA+LV + +E+L + L AA + + M SFS ++ +M ++L++ V+ Sbjct: 87 NYAKLVGVEVKEVLASYD---ALDAATIQRSEMLSFSKETSKQAEHSRVMWLSYLIVAVL 143 Query: 125 IGLSGAWWWQDRKAQQEEITTM------ADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 +GL+ WW Q+ + Q ++ + M A+ S ++ + + + S+ + T+ D A S Sbjct: 144 VGLTVLWWLQESRQQADDSSNMIPNTAPAENVSGDVVTTNIEPSSLAIETAPVNDNAQLS 203 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 ++ A +T T A+ + AN D A+ D + P Sbjct: 204 EKKDEIE-LALDTSTKALI----------------NDANNDLKAS---ANIVVNDVSQPA 243 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 + A ++T V F DCW+ + DATG+++ G+++ + + G+AP + + Sbjct: 244 EPEVAAISTA-------VFTFKGDCWVNIYDATGERIAWGVKKSGYVMTVQGKAPLSITV 296 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 G P I + +PVD+S F +A+ L Sbjct: 297 GKPELASIVFNDQPVDMSAF-NVGNIAKFNL 326 >UniRef50_A3WP02 Predicted transcriptional regulator, contains N-terminal xre-type HTH domain n=1 Tax=Idiomarina baltica OS145 RepID=A3WP02_9GAMM Length = 387 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 52/357 (14%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G L+ ARE ++ + A+RL L++ + IE D +TF++GY+R+YA+L+ + Sbjct: 36 GHILKEAREAKSMTPREAADRLRLRLQVIELIEADDYDTFSTTTFVKGYLRAYAKLLGVD 95 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 + ++ K +R + PMQSFS + ++ D LM TWLV+ VV+ WWWQD Sbjct: 96 QSKIDEAY-KSLNIREPESTPMQSFSRRVKHQESDNRLMMITWLVV-VVVIALVIWWWQD 153 Query: 136 R--------------------KAQQEEIT---TMADQSSAELSSNSEQ------------ 160 AQQE+ T T+ + A+ +++SEQ Sbjct: 154 SDLSFSKLSNDVEQAVTEQTDSAQQEDSTDTPTLRQSNQAQEATSSEQPLLESEVSAADA 213 Query: 161 GQSVPLNTSTTTD---PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ-- 215 S+ +N D P T P A + T++N Q VT+ A + Q++ P + Sbjct: 214 STSLSINDPAQQDEMSPDTIEQPVAEMPETSSNQQ---VTSEAMSEVAQESDANEPRETR 270 Query: 216 -ANVDTAATPAPTAATTPDG--AAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATG 272 A +TA+ P PT + + D + D+A T AD LVM F+ +CW++V DA G Sbjct: 271 TAEQNTASEPEPTVSASSDANSVSGGDEDEADNTALAAD---LVMEFSEECWVKVEDADG 327 Query: 273 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + G + + + + G+AP+ I PAAV I Y G +DLS + R ++VARLT+ Sbjct: 328 EVQAIGTKAQGYRMPVPGKAPFSATICKPAAVTITYAGNALDLSNY-RQDRVARLTI 383 >UniRef50_A3QCG1 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QCG1_SHELP Length = 336 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 173/325 (53%), Gaps = 21/325 (6%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G L+ ARE ++ +VAE+L L+ S V+D+E D ++T+++GY+++YAR++ Sbjct: 22 TLGQWLKAARESRQMTLASVAEQLNLRPSIVQDLEADNYDNIASATYVKGYVKNYARILG 81 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + ++ L + P+ +A MQSFS R+ RDG LM T+L++FV++ L WW Sbjct: 82 LEMAKVDAYLAESFPVVSAPT--MQSFSRKTTRQARDGRLMLVTYLIIFVLLALLVLWWV 139 Query: 134 QDRKAQQE-EITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 Q + +++ + + +AELS+ +P +++P P A Q Sbjct: 140 QKSAMVADLDLSKPSVEETAELST-------LP----ASSEPMLAQDPQAGTGIEMPREQ 188 Query: 193 T-PAVTAPAPAVDPQQNAVVSPS-QANVDTAATPAPTAATTPDGAAPLPT----DQAGVT 246 P T AV Q A S S Q + A AP A +TP+ L QA Sbjct: 189 AAPDQTVSDQAVPDQTMAEESTSAQLTGEQAEDLAPEAGSTPETGVALEVTNQNSQADEA 248 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 AD L ++ + DCW++VTDA GK L +G++ +N+ GQAP+K+ +GAP ++ + Sbjct: 249 LKSADDAVLALSLSGDCWIKVTDADGKVLVNGLKLAGKEMNVFGQAPFKVILGAPQSLTM 308 Query: 307 QYQGKPVDLSRFIRTNQVARLTLNA 331 + G+ VDL+++ + +VARLT+ + Sbjct: 309 RLNGEQVDLAKY-PSGRVARLTVGS 332 >UniRef50_Q12PT5 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12PT5_SHEDO Length = 364 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/356 (31%), Positives = 174/356 (48%), Gaps = 34/356 (9%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 TE ++ T GA LR ARE GLS Q VA +L L+ S + DIE DK A ++T++R Sbjct: 11 TEQVDPSSDITTVGAVLRKARESKGLSIQEVALQLHLRPSVIVDIENDKFDAMSSATYVR 70 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 GY+++YAR V E + L +Q P A MQSFS ++ RD L+ FT++++ Sbjct: 71 GYVKNYARFVAADIELIKTCLTQQLPQEAPP--SMQSFSRKTTKQARDKRLLIFTYIIVS 128 Query: 123 VVIGLSGAWWWQ------DRKAQQ---EEITTMADQSSAELSSNSEQGQ---SVPLNTS- 169 ++ L WW Q D Q EE+ + + E S++ +PL TS Sbjct: 129 TLLALLVLWWVQKSTLLSDVDVSQPSMEEVAATEQEHALEAFEISQRALPLPDLPLVTSD 188 Query: 170 --TTTDPATTSTPPAS--VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA 225 + T+ T A +DT T VT P + Q V P +A + + Sbjct: 189 ADSVTESGTEVNKGAESDLDTNTTALSGGTVTTENPLIQGQSLESVMP-EAGIASLPATG 247 Query: 226 PTAATTPDG----------AAPLPTD--QAGVTTPVADPNALVMNFTADCWLEVTDATGK 273 TA A PL +D Q+ V + +A+ + L + T D W++V D+TGK Sbjct: 248 NTALVENSVSNSVSNNEAQAKPLISDVEQSSVAS-LAEGDRLSVELTGDSWMKVVDSTGK 306 Query: 274 KLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 L G++ + ++G+AP+ L +GAP V + + G+ VDLS+++ +VAR T+ Sbjct: 307 VLIDGVKTPGRTIAVSGKAPFSLILGAPKFVSLSFNGEQVDLSQYLD-GRVARFTI 361 >UniRef50_C7R5S7 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5S7_KANKD Length = 303 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 35/330 (10%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 T+ T +++ + G+ L+ AREQ G+S + V ++L L TV IE D ADL +TF R Sbjct: 4 TDQTLEKDVQFSPGSLLKQAREQAGVSIEDVMQKLKLTRQTVVSIEADDYSADLPATFYR 63 Query: 63 GYIRSYARLVHIPEEELLPGLE---KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 GY+R+YA L+ + +++L+ + K+ L + + L K + ++ T L Sbjct: 64 GYLRNYAELLKMDDDDLVENFDNYCKRNNLFTQNEQSLATIELEKPITSSNWFIKAITTL 123 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 V+ ++ + + ++K QE +A S SEQ ++ L S D T Sbjct: 124 VVLALL-FAIYYLLVEKKIWQE--------FTASTESASEQETTLTLGQSEEGDLLT--- 171 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 P V +TN + +T P Q A + + ++ PTA AA + Sbjct: 172 -PEPVIADSTNNLSANITDPQD----QATAALDDKELLSESMVVEEPTAE-----AATIV 221 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 ++ G +V+ F+ DCW+ +TDA GK L G+++ +++L+G P +L +G Sbjct: 222 SNTGG---------EVVLVFSDDCWVRITDANGKVLALGIKQGGTSMSLSGPTPIELTLG 272 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 P+AVQ+ YQ +PVDLS + T + ARL L Sbjct: 273 KPSAVQLSYQNEPVDLSSYPDT-RAARLIL 301 >UniRef50_Q0HKW0 Putative uncharacterized protein n=11 Tax=Shewanella RepID=Q0HKW0_SHESM Length = 380 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 157/357 (43%), Gaps = 43/357 (12%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 +T G LR AREQ+GLS A +L L+ V ++E D +ST++RGY+++YAR++ Sbjct: 24 VTLGTVLRTAREQMGLSIADTAVKLHLRPGIVENLEADDFSNISSSTYVRGYVKNYARML 83 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 + + L +Q PL MQSFS + RD L ++ ++ V++GL WW Sbjct: 84 GVDNALIEACLTRQVPLVTQPA--MQSFSRKTTYQARDTKLKWLSFFIVIVLLGLFVLWW 141 Query: 133 WQD---------RKAQQEEIT----TMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 Q K EE+ T+ + SE+ + +N S TD T Sbjct: 142 MQRTTLVTHVDISKPTAEELAAANQTLPGDVLLTETDASERLSEIAVNGSMATDGPVKDT 201 Query: 180 PPASVD-------------TTATN------------TQTPAVTAPAPAVDPQQNAVVSPS 214 +++D T+A N T + TAP A + +V+ Sbjct: 202 DASTIDPNMNDSAAMEAEQTSAANSAMNASESSTALTNNASNTAPNTASTSGASNIVAVP 261 Query: 215 QANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV-ADPNALVMNFTADCWLEVTDATGK 273 A + A AP T T PV A +++ + T DCW+ + DA GK Sbjct: 262 NATQNGATNTAPVQNQTASNTPATNTASTAQAMPVAAGQSSITIELTGDCWINIVDAKGK 321 Query: 274 KLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTL 329 + G++ N+ +G P+K+ +GAP V GK + L+ F + +VARLT+ Sbjct: 322 AIVDGVRGAGANIQASGVPPFKVILGAPTVVSTFTVDGKAISLAEFPK-GRVARLTI 377 >UniRef50_UPI0000E0F4D9 hypothetical protein GHTCC_02974 n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F4D9 Length = 376 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 66/369 (17%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G L AR LS VA+RLCLKV+ + +E+D+ ++ TF++GY RSYA+L+ + Sbjct: 15 GLLLAEARRAKQLSTDDVAKRLCLKVNIIEALEKDELLPSISLTFIKGYTRSYAKLLGLD 74 Query: 76 EEELLPGLEKQAPLRAAKVAP--MQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 E ++ L +AP MQSFS ++ D M T+ ++ VV+ L WW Sbjct: 75 EVHII-TLFNDFHASETLIAPKKMQSFSRKVAKENNDSRWMLVTYSLIAVVLILIVIWW- 132 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA----------- 182 +QQ A SS ++SE V STT TST P+ Sbjct: 133 ----SQQNSENFFASPSSVPALNSSEADLPV---ASTTEQLQNTSTIPSNLNEKQTTNSL 185 Query: 183 -SVDTTATN-----------------------TQTPAVTAPAPAVDPQQNAVVSPS---- 214 SVD+ ++N T+T ++ P+ A+ +QN + + Sbjct: 186 DSVDSISSNGDLAGNLPEESILTESLLTETLPTETSSLEEPSVAMLTEQNNSLESNDLNQ 245 Query: 215 --------------QANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFT 260 Q N+ A + L D + V + L+ F+ Sbjct: 246 VEQETIPDFVPDKVQGNIAQVLDLLENDAPDVESELRLFDDDMSASNDV-EIVELMFTFS 304 Query: 261 ADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIR 320 DCW+++TDATG + G++++ + ++GQ P+ + +GAPA+V++ Y G+PVD+S F+ Sbjct: 305 NDCWIKITDATGNDIAYGVKKQGRVMPVSGQPPFSVILGAPASVKVNYAGEPVDIS-FLP 363 Query: 321 TNQVARLTL 329 +++ R L Sbjct: 364 SDRTGRFVL 372 >UniRef50_C9R6E7 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=C9R6E7_AGGAD Length = 351 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 155/353 (43%), Gaps = 56/353 (15%) Query: 2 NTEATHDQNEALTT-GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD-LAST 59 NT T +NE TT G + R ARE L L+ + V++ + L+ + VR IE ++ + + +T Sbjct: 5 NTSETQSRNEQQTTLGDKFRLAREALNLTPEQVSKEISLRPALVRLIENNQFTNETIPAT 64 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK---------KRD 110 F+RGY+RSYA+ + IP+ E + Q LGK + + Sbjct: 65 FMRGYVRSYAKFLRIPDSEWM---------NVIHFGNEQKNDLGKNARATRSVNQYSSHN 115 Query: 111 GWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSE--------QGQ 162 W+ + LV+ +V+G++G WWW+ + E + + + +E G Sbjct: 116 NWIGYLSALVILIVVGMTGMWWWESHQQSNAERDVLVNSYTPSAPVTTEVNTAPAKPAGN 175 Query: 163 SVPL--------NTSTTTDPATTS----TPPASVDTTATNTQTP------AVTAPAPAVD 204 +P+ NT T T P T T P + A NT P A A A + Sbjct: 176 EIPVPQPTAKIENTLTDTAPKGTGIEIETKPLTETPVAANTTAPVAQESNAPIASANVLQ 235 Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 P+ N + S Q T+ P A+ P A + + V + L + +CW Sbjct: 236 PKMNKIGSNEQL---TSVQPESQASAEPQSAV-----ENSSVSAVTTKDNLYIEVIGNCW 287 Query: 265 LEVTDATGKKLFSGMQRKDGN-LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 + V D +K+ + + K G+ L+ + PY L IGAP V+I Y+G+ L+ Sbjct: 288 ISVKDK-NRKVLAQKEYKQGDVLSFNEEEPYSLIIGAPGNVRITYKGQAFPLT 339 >UniRef50_A1TZP9 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZP9_MARAV Length = 340 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 33/338 (9%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEE-DKAPADLASTFLRGYIRSYARLV 72 + G +LR ARE+LGLS +A++ L+ S ++ IEE D + D FL+GY+R+YAR V Sbjct: 14 SVGQQLRRAREKLGLSVSDIADQQHLRPSVIQSIEEGDYSKVD-TELFLKGYVRTYARQV 72 Query: 73 HIPEEELLPGLEKQ-APLRAAKVAPMQSFSLG--KRRKKRDGWLMTFTWLVLFV-VIGLS 128 + + L+ L+ + PLR + QS L +R+KKR + L+ F+ V+G Sbjct: 73 QLNADALIAALDSELEPLRQQREQEHQSNPLVDIERKKKRKRQIAKLVVLLAFLGVVGFL 132 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNS-----------EQGQSVPLNTSTTTDPATT 177 + K E + + AD S L + S E+ SV +P Sbjct: 133 AYSYL--VKPVSEPVQSNADGISESLEAQSGEAVSDASPKLEEAPSVSEEAEQPAEPEQM 190 Query: 178 STPPASVDTTATN----TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 + SV T T T A++ P + Q ++S Q +V+ P A +PD Sbjct: 191 DSDTGSVGNVETESGAVTDTEALSEPTASGSLGQEELLS-EQPSVEQ----PPVVAQSPD 245 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAP 293 P T+ + PV + L M F+ DCW++VTD G +L S ++R+ L ++GQ P Sbjct: 246 ---PALTESEVMEDPV-ETVRLAMTFSDDCWIQVTDGAGNRLASALRREGDALEVSGQPP 301 Query: 294 YKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 ++ +GA +AV+ +++QG+P+ L F N + TL Sbjct: 302 LRVVVGAMSAVESLEFQGEPMGLGNFRVVNNRSEFTLE 339 >UniRef50_Q3ICZ4 Putative transcriptional regulator, HTH domain n=2 Tax=Alteromonadales RepID=Q3ICZ4_PSEHT Length = 287 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 150/332 (45%), Gaps = 52/332 (15%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN E T Q+E + G L+ RE +S +A L L V V+ +E D+ +TF Sbjct: 1 MNEEITQPQSEQPSLGQILKTHRENADISLATMATHLKLTVLQVQRMENDEYQLLGPTTF 60 Query: 61 LRGYIRSYAR---LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 ++GYI++Y R + H P +LP AP K MQSFS ++ D LM + Sbjct: 61 VKGYIKNYCRELKIDHTPILAMLP-----APTTPEKPVDMQSFSRRTEKEANDSRLMIAS 115 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 +++L +VIG S WWWQ+ +E+ + + ++S +S EQ Sbjct: 116 YIILAIVIGSSALWWWQNSMPIEEQTSNINVENSI-MSEQQEQA---------------- 158 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 A + A+ Q + A Q +A+ PS + T AP A Sbjct: 159 ----AQSNIGASQQQVQEINNVALPQSEQLSAL--PSGNSTINTTTTAPNEAN------- 205 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 + + +VM F + W+E+ DA G+K+ G+++ + LTG AP+ + Sbjct: 206 -------------NSSTIVMLFNDESWVEIYDAEGEKIAFGVKKAGYEMTLTGIAPFSVV 252 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +G AV I G+ VDLS F + N++A+ L Sbjct: 253 LGKHDAVNITLNGETVDLSAFPK-NRLAKFKL 283 >UniRef50_A3Y633 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y633_9GAMM Length = 343 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 45/346 (13%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G L+ R +L L ++ VA +L + + VR +E ++ ++TF RGY+++Y RL+ Sbjct: 15 VNIGKELQRKRNELNLDERQVATQLKIPIEQVRALESNQFDYFRSATFARGYLKNYVRLI 74 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 + E+ +L G A V P+ GK+ + D ++ + ++ ++I L A+W Sbjct: 75 ELDEDRIL-GAFDDALDDEPGVQPINKN--GKQAQMADPIVILVSVVIGAMLIFL--AFW 129 Query: 133 WQDRKAQQEEITTM-ADQSSAELSSNSEQ-------GQSVPLNTSTTTDPATTSTPPASV 184 W + I+T A Q + E+ + + P++T+ TT + STP S Sbjct: 130 WPTMMQKSPIISTRPAIQPNNEVVQEAPRVAEPELIATETPVDTTETT--PSVSTPDESQ 187 Query: 185 DTTATNTQ-----TPAVTAPAPA------------VDPQQNAVVSPSQANVDTAATPA-- 225 + T+T+ + TP T P A + + A++ + N D + PA Sbjct: 188 NLTSTDVEKTDEATPVETTPVVAQVEDEDADVVTGLSAETIAILKDAGVNPDNISLPANE 247 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 P+ A + AA P P+ D + LV+NF++DCW EV D G+ L+SG++ D + Sbjct: 248 PSLAEKAEIAANQP--------PLYDDD-LVINFSSDCWTEVRDGNGRILYSGVKTADSS 298 Query: 286 LNLTGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLN 330 L LT Q PYK+ +G V + Y+G+ D S F R N +AR LN Sbjct: 299 LTLTAQGPYKVVLGFAGGVSSLIYKGEEFDFSSFTRKN-LARFELN 343 >UniRef50_B4RV90 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RV90_ALTMD Length = 350 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 97/354 (27%), Positives = 160/354 (45%), Gaps = 39/354 (11%) Query: 2 NTEATHDQNEALTT-GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 N E T Q E + GA L+ RE LGLSQQ +A++L LK + D+E D + TF Sbjct: 8 NQEVTSQQQENTPSPGAMLKARRETLGLSQQDIADKLFLKSFQINDLESDVIDERSSVTF 67 Query: 61 LRGYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 +GY+R+YA+ + + E++ E+ +QSFS ++ D M T++ Sbjct: 68 TKGYVRNYAKQLGMNSHEVIEAFERFHNQTSVPSSEKLQSFSKRVAKQTHDDRWMMVTYI 127 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 +L ++I WW+Q D+S AEL +E + NT ++ TS+ Sbjct: 128 ILLLIIAGVVVWWYQQPN----------DESVAELPL-TEAVKRETANTPISSTERGTSS 176 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA--ATTPDGAAP 237 A ++ NT + A T + ++A V SQ+ DT A + DGA Sbjct: 177 SQAEKRISSDNTASQASTLGNDTL-TSRSAEVGESQSGEDTGPQDDDFAQDGSLNDGAIS 235 Query: 238 LP----TDQAGVTTPVADPN------------------ALVMNFTADCWLEVTDATGKKL 275 P D +T V+ N ++ F DCW+ + DA+G+ + Sbjct: 236 APDTTVDDSNNLTALVSGDNEVQQSSLKINTQSSAAPISMTFTFDDDCWVNIKDASGEAI 295 Query: 276 FSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 G+++K + + G P ++ +GAP V+I G+ VD+S + + + AR L Sbjct: 296 AYGVKQKGRVMEIQGVPPVEVTLGAPDNVRISVNGESVDISSY-QNGKTARFAL 348 >UniRef50_Q5QYA8 Predicted transcriptional regulator, contains N-terminal xre-type HTH domain n=1 Tax=Idiomarina loihiensis RepID=Q5QYA8_IDILO Length = 365 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/347 (27%), Positives = 157/347 (45%), Gaps = 42/347 (12%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR ARE GL Q+ VA++L L+ + +E D +TF++GY+RSYA+L+ + Sbjct: 31 GEILREAREAKGLEQREVADQLRLRKQIIELLEADDYSTFSTATFIKGYLRSYAKLLDLD 90 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 + EL K + + + MQSFS K+ ++ D LM V+ +++ WWWQ+ Sbjct: 91 DTELFEAY-KARGYKEVESSQMQSFSRRKKHEESDNRLM-LITYVVIIIVVALVIWWWQE 148 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD----------PATTSTPP---- 181 E T Q S+E+S P+NT D P P Sbjct: 149 PDLGFSEGET-GTQESSEVS---------PVNTDDEADNVGDIEISNQPTEPQIAPNEDE 198 Query: 182 ----ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ-ANVDTAATPAPTAATTPDGAA 236 + V+ TN +V P N SQ AN D+AA P A Sbjct: 199 AILESEVEADDTNVAVESVQEPVSESGENDNENNDESQAANTDSAANDVNDTQELPTETA 258 Query: 237 PLPTDQA--GVTTPVADPN--------ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 +QA V + +P+ +LV+ F +CW+++ DA+G+ G++ + Sbjct: 259 EQTDNQAETSVESEAVEPSPQPEAVSASLVLEFNEECWVKIDDASGETQAVGVKAAGYRM 318 Query: 287 NLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 + G+AP+ + + P AV + + G ++ +F RT +VAR T+ +E+ Sbjct: 319 PVPGEAPFSVTLCKPEAVNVSFNGNAFNMDQF-RTGRVARFTVPSEE 364 >UniRef50_Q15R55 Transcriptional regulator, XRE family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R55_PSEA6 Length = 345 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 101/356 (28%), Positives = 172/356 (48%), Gaps = 41/356 (11%) Query: 1 MNTEATH-DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M+ E H ++++ G L+ AR + GL+ + +A + LK S + +E D+ ++ T Sbjct: 1 MSEEVQHMEESQVFGPGPVLKAARLEKGLTVEQIAGLIHLKPSLIIALENDEYDPSISMT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAP--MQSFSLGKRRKKRDGWLMTFT 117 F++GY++ YAR V + E ++L GL+ L K P +QSFS + D LM T Sbjct: 61 FIKGYLKLYARQVDVSEAQVLDGLDN---LDTHKKEPAKLQSFSRRVAHQANDDKLMLVT 117 Query: 118 WLVLFVVIGLSGAWWWQ--DRK---------AQQEEITTMADQSSAELSSNSEQGQSV-- 164 +L+L +V+ L WW+Q D + Q E + + ++ S+ E +V Sbjct: 118 YLILAIVVALVVVWWFQQGDNETASTLDTPTVQSEAQNNVKSEKPVDIQSDVENDTAVIA 177 Query: 165 --PLNTS--TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDT 220 +N S +TD A +T + +N P V+ N++++P A+ Sbjct: 178 TGDVNESGLRSTDMAQETTEFPRDEVNQSNEIQPEVSGSLE----DSNSILTPDNASPQD 233 Query: 221 AATPAPT-------AATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGK 273 PA T A P +A T+Q G V V F DCW+ V DATG+ Sbjct: 234 GVAPAVTVNSESASAQLNPQVSASAQTEQTGELVDV------VFTFNDDCWVSVIDATGE 287 Query: 274 KLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + G++ ++++G AP+++ +GAP+ VQI+Y + +D+S F+ N A+ TL Sbjct: 288 TIAVGVKVAGRVMSISGVAPFEVILGAPSVVQIRYADEDLDMS-FLAPNSTAKFTL 342 >UniRef50_A4C7F7 Putative transcriptional regulator, HTH domain n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C7F7_9GAMM Length = 315 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 21/315 (6%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G+ L RE +S A+RL L + + ++E ++ +TF++GYI+SY + + + Sbjct: 18 VGSFLTAGREAAKISVDEFAKRLNLSAAQLTNLESNQFALLGPATFVKGYIKSYCKFLSL 77 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E +L + Q ++ MQSFS ++ D LM F++ VL +VIGLS WWWQ Sbjct: 78 DESYVLSLYDAQT--EGPTISKMQSFSRRTEKEAHDNRLMLFSYAVLSLVIGLSVLWWWQ 135 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 +R TT A +S E+ + +Q SV S P +++ + Sbjct: 136 NRD------TTPAPIASPEIQNVEQQSVSVVAQDSLQKQPVQNQDAQLGLNSEQITNELS 189 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 T + + +P V+ A T P A D+ + N Sbjct: 190 EQTQV-------EQSEQTPESTQVEQELNEA-TQVIEPVVAVIKKNDKQANNSL----NK 237 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 +VM F D W+E+ D++ ++ G+++ + + G+AP+ + +G P V++++ G+ +D Sbjct: 238 VVMYFNNDSWVEIFDSSAARVAFGVKKAGYTMTVEGKAPFAVVVGKPHLVEVEFDGEQID 297 Query: 315 LSRFIRTNQVARLTL 329 +S+F ++++A+ +L Sbjct: 298 MSKF-PSHRLAKFSL 311 >UniRef50_Q085U7 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085U7_SHEFN Length = 325 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 100/336 (29%), Positives = 153/336 (45%), Gaps = 50/336 (14%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + +T GA L+ ARE GLS + VA +L L+ + D+E D ++T++RGYI++YAR Sbjct: 19 DVVTAGAILKAAREAKGLSLETVATQLHLRPKIINDLENDIFVNIASTTYVRGYIKNYAR 78 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAP-MQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 +V+ ++ L Q P VAP MQSFS + R+ L T+L++ V+I + Sbjct: 79 VVNADINQIQQCLSHQLP---EIVAPAMQSFSRKTTHQARNSRLNLVTYLIVAVLIAMLV 135 Query: 130 AWWWQ------DRKAQQEEITTMADQSSA-----ELSSNSEQGQSVPLNTS---TTTDPA 175 WW Q + Q + +A +S+ + S S Q L+ + TD A Sbjct: 136 LWWVQKSSLLTNIDLSQPTVEEIAAESNMPEPQQIIRSGSVQSSGNGLDNEGNVSATDVA 195 Query: 176 TTSTPPA--SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 + A + TA + T + + PA +V N V S TA T+ Sbjct: 196 NQAAIEAEDKLIQTAQDAATASQSLPASSVVESTNIVSS-------------STADTSLA 242 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAP 293 GA + L + T DCW+ VTDA GK + G++ + + G P Sbjct: 243 GA----------------ESVLTIELTGDCWVNVTDANGKVMVDGVKNAAQRIEVRGIKP 286 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +K+ +GAP I G V L+ F +VARLTL Sbjct: 287 FKVILGAPQVASISLDGNNVSLAEF-ANGRVARLTL 321 >UniRef50_B9CX69 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=B9CX69_9PAST Length = 334 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 37/336 (11%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK-APADLASTFLRGYIRSYARL 71 L+ G +L++ARE L LS + VA++ LK S + +E D ++A TF+RGY+R+Y R Sbjct: 13 LSLGQQLKSAREALNLSIEDVAQKTNLKKSHLESLENDIFILQNVAPTFVRGYVRNYVRF 72 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + +PEE L + K ++ S +K ++ W+ T VL IG++ W Sbjct: 73 LRLPEE--LVSSVNYGEVTIPKEIVHKTSSEKVVQKSQNQWVKYLTIFVLLGAIGMTLLW 130 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNS--EQGQSVPLNTSTTT------DPATTSTPPAS 183 WWQD +A+Q Q+ + +N+ + P NT+ T PATT+T Sbjct: 131 WWQDYQAEQ--------QNRDQFVNNAIPVEATPTPANTNQATQVEPIIQPATTNT---- 178 Query: 184 VDTTATNTQTPAVTAPA-PAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 +T NT PA PA P Q++ +P+ + A PAP A Q Sbjct: 179 -ETVVANTAAPANEQPAQPVAQVAQSSETAPTPTTQELATQPAPVATEVAPQIESANVLQ 237 Query: 243 AGVTTPV-------ADPNALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGN-LNLTGQAP 293 T PV + L + T + W+ V + KK + +G L G Sbjct: 238 QTQTNPVETEQPAAVSNDELRIEITGKESWITVKNTKSKKSLAEKLYTNGEVLAFNGNEQ 297 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 Y+L IGAPA V++ Y+G+ V L R VAR+ L Sbjct: 298 YRLTIGAPANVKLYYKGQLVPLKIDGR---VARIKL 330 >UniRef50_A6VQX7 Helix-turn-helix domain protein n=4 Tax=Pasteurellaceae RepID=A6VQX7_ACTSZ Length = 312 Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 151/329 (45%), Gaps = 58/329 (17%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK-APADLASTFLRGY 64 T ++N A G + R ARE LGLS + A++L L+V ++ IE ++ A + +TF++GY Sbjct: 3 TEEKNVA-ALGEQFRQARENLGLSLEEAAKKLNLRVQVLQFIENNEFAQKSIPATFMQGY 61 Query: 65 IRSYARLVHIPEEEL------LPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 +RSYA+LV +PE + K RAA++ ++ + W+ FT Sbjct: 62 VRSYAKLVKLPESIWRGAVPSFGDMPKNDLSRAARIDK----AINPHSSHNNRWIGYFTA 117 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQS------VPLNTSTTT 172 ++L V G++ WWW++ + +E T+ Q+ + + S Q + VP+N S T Sbjct: 118 IILLFVAGMTALWWWENYQQSNKERETLV-QNYTPVETTSVQSKDLLPAVQVPVNPSDTA 176 Query: 173 ----------DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAA 222 +T + S DT +T + ++TA QN V S + + D+ Sbjct: 177 AETLMQSERPTASTIESGTVSTDTNSTQSSVESLTA--------QNNVESAVENSDDSQP 228 Query: 223 TPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRK 282 AP AA DG Q +T A W+ V DA K L R+ Sbjct: 229 AAAPVAA---DGDL-----QIEITA-------------ATSWISVKDAKRKVLAQKEYRQ 267 Query: 283 DGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 LN APY + IGAP+ V+I Y+G+ Sbjct: 268 GETLNFKDGAPYAVIIGAPSNVKITYKGE 296 >UniRef50_Q1QTK9 Transcriptional regulator, XRE family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTK9_CHRSD Length = 351 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 154/352 (43%), Gaps = 34/352 (9%) Query: 6 THDQNE--ALTTG-----ARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 TH+Q++ A TTG +LR RE+ GLS + VAE+L L+ + V+ +EED+ + Sbjct: 4 THEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQVPIA 63 Query: 59 TFLRGYIRSYARLVHIPEEEL---LPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 T+ RGY+R+YA+L+ + ++ + L + L +S + + W+ Sbjct: 64 TYRRGYLRAYAKLLGVDDKRVAQAYDALHGRDDLDRTVTPAYRS----QPPSRLGAWVFK 119 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNS------EQGQSVPLNTS 169 L++ + + WWQ R+ E + D +S + + E G + S Sbjct: 120 LVTLLIVLGLIGLTLLWWQSREGN--EFFGLGDGASVSMETTQDGDVTQEDGGDASVTES 177 Query: 170 TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ----------ANVD 219 T D + + AS D + P + VD + + A D Sbjct: 178 ATGDAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTD 237 Query: 220 TAATPAPTAATTPDGAAPLPTDQAGVTT--PVADPNALVMNFTADCWLEVTDATGKKLFS 277 A+ A ATT + P TD A + ADPN L + F W E+ DA ++L + Sbjct: 238 GASPEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLA 297 Query: 278 GMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 G+Q + G P++L +G V+I Y+ VDLS +N VAR TL Sbjct: 298 GLQDAGTQAQVEGTPPFRLTVGNATGVEISYRDDNVDLSEHTGSNNVARFTL 349 >UniRef50_Q2BGS7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGS7_9GAMM Length = 341 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 24/345 (6%) Query: 1 MNTEATHDQNEALTT--GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 M+TE Q E L GARL ARE L LS + V+ L L +R +E + Sbjct: 1 MSTEEQECQPELLAEEWGARLTTARESLSLSIEQVSADLNLPQDYIRKLEIGSLEGLPSL 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 F RGYIR+YA+L+H+ + +L+ E+ + P+ ++ K D + + Sbjct: 61 VFARGYIRAYAKLLHLDDNQLVSEFEQLHGESSGGAIKPVSRVR--EQVKVNDPVMKLSS 118 Query: 118 WLVLFVVIGLSGAWWWQDRKA------QQEEITTMADQ-SSAELSSNSEQGQSVPLNTST 170 W+ + +IG++ WWWQ + E M +Q AE ++++ + T+ Sbjct: 119 WIFVLAIIGVT-VWWWQTQYGGSFSFSSSSETEQMTEQPLVAEDNADTADVVELEDGTAK 177 Query: 171 TTDPATTSTP---PASVDTTATNTQTPAVTAPAPAVDPQQ--NAVVSPSQANVDTAATPA 225 P +P A + +T +T V A +PQ A ++ Q +D A PA Sbjct: 178 LVLPVLEDSPAGEEAQEEPASTEAETSEV---AEESEPQYLTQAEINKLQQAIDDNA-PA 233 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 AA+ P A + + + A + +F A+CW+ + DA GK LF+ ++ K + Sbjct: 234 THAASEPAVQAAPAIEASVAQSSEALTAKISADFVAECWVSIKDADGKTLFNNLRGKGQS 293 Query: 286 LNLTGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTL 329 L ++G+AP + +GA AV + + G +DL + R N V R++L Sbjct: 294 LEVSGKAPVSILLGAADAVGRFTFNGTELDLDKHSRKN-VVRISL 337 >UniRef50_B8F8B5 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F8B5_HAEPS Length = 360 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 105/358 (29%), Positives = 161/358 (44%), Gaps = 51/358 (14%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA-DLASTFLRGYIRSYARL 71 L+ G +L+NARE L L+ + VA + LK S + IE D + F+RGY+R+Y R Sbjct: 9 LSLGQQLKNAREALNLTIEDVARKTNLKKSHLEAIENDIFILPSVPPAFVRGYVRNYVRF 68 Query: 72 VHIPEEELLPGL---EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + +PE L+ + E P K AP+ K K + W+ TW+VL +G++ Sbjct: 69 LRLPET-LVNSVNYGEVTIPKEVRKAAPIAV----KNHKSQMRWVKGLTWIVLLSAVGMT 123 Query: 129 GAWWWQDR---KAQQEEITTMADQSSAELSSNSE--------------QGQSVPLNTSTT 171 AWWWQ+ +A +E++ +++A++ + Q ++P + Sbjct: 124 LAWWWQEHQKDQANREQLIVNTTEATAKVVEEPQVTPVEPQPTPAEVPQAVTLPAKNAEP 183 Query: 172 TDPATTS---TPPA--------SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDT 220 PAT + TP A SV T TQT VT P + + V+SP+ +V Sbjct: 184 ATPATVAESRTPVAVEQAELVQSVQTEPVLTQT-EVTPPVQTGSSRISMVISPNSGSV-A 241 Query: 221 AATPAPTAATTPDGAA--------PLPTDQAGVTTPVADPNALVMNFT-ADCWLEVTDAT 271 A P AA T A ++QA T A L + T A+ W+ V A Sbjct: 242 AQVPTEVAALTETEQAVNVLQAMQTEASNQAEEPTQTAVEEELRIEITGAESWITVRTAQ 301 Query: 272 GKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 K+L + + L+ Y+L +GAPA V+I Y+G+ V L R VAR L Sbjct: 302 NKRLAERLYKAGEVLSFNDNEQYRLTVGAPANVKIYYKGQVVPLKVDGR---VARFKL 356 >UniRef50_B1KKJ1 Putative uncharacterized protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKJ1_SHEWM Length = 340 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 29/340 (8%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS-TF 60 ++ T D +E +T G+ L+ ARE+ G S +A +L L+ V DIE D D+AS + Sbjct: 14 DSNETPDISEQMTLGSLLKAAREEQGASIGDIAGQLHLRPCIVEDIEADNF-GDIASAIY 72 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++GY+++YAR+V + + L+ Q P A MQSFS R+ RDG LM T+L+ Sbjct: 73 VKGYVKNYARIVQADAQAIQACLDIQLP--KASAPEMQSFSRKTTRQARDGRLMFVTYLI 130 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 F+++ L WW Q Q D S + +E Q P +T DP T Sbjct: 131 AFILLALLVLWWVQKSDTQAS-----VDFSKPTMEEMAESIQE-PFSTKALPDP--TLER 182 Query: 181 PASVDTTATNTQTPAVTAPAPAVDP---QQNAV--VSPSQANVDTAATPAPTAATTPDGA 235 + ++++ + ++ A++ N + +SP NV+++ ATT Sbjct: 183 DSGIESSGIESSDTGLSINNSAINSGVVHSNDIDDLSPETVNVESS-----DLATTVVST 237 Query: 236 APLPTD-QAGVT--TPVADP---NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT 289 LP Q+ + P D + L ++ ADCW+ V DA GK L + +++ L + Sbjct: 238 EQLPVSVQSEIVQDLPSVDSLGASRLSLSLVADCWINVKDADGKVLINDLKKAGSLLEVK 297 Query: 290 GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 G+ P+KL +GAP AV I+ + + L+ + +VAR +L Sbjct: 298 GREPFKLTLGAPQAVTIKLNEESISLADY-ANGRVARFSL 336 >UniRef50_A8FT69 Putative uncharacterized protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FT69_SHESH Length = 310 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 91/329 (27%), Positives = 148/329 (44%), Gaps = 48/329 (14%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 T +Q ++L G+ L+ ARE+ G S +A +L L+ V DIE D ++T+++GY+ Sbjct: 21 TSEQEDSL--GSLLKAAREKQGASVADIAGQLHLRPCIVEDIEADNFGEIASATYVKGYV 78 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 ++YAR+V ++ + L++Q P A MQSFS R+ RDG LM FV Sbjct: 79 KNYARIVQADKKAIQACLDRQLP--KASAPEMQSFSRKTTRQARDGRLM-------FVTY 129 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 ++ ++ T++D + L+ T + A + V Sbjct: 130 LIAFILLALLVLWWVQKSDTLSD---------------IDLSKPTVEEMADSQLTQVEVA 174 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTA-ATPAPTAATTPDG----AAPLPT 240 +T P ++ Q + TA AT P+ + G A + + Sbjct: 175 STLVEEGDP----------------LTGLQTDTHTATATKTPSDRESEKGEQADAVEMES 218 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 V V ++L + DCW+ V DA G L + ++ LN++G P+K+ +GA Sbjct: 219 VPTSVEKAVTRLSSLSFDLNGDCWINVKDAKGDTLINDLKTAGSQLNVSGVEPFKITLGA 278 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 P AV I+ G+ V LS F +VARLTL Sbjct: 279 PQAVSIKLNGEKVSLSDF-PNGRVARLTL 306 >UniRef50_A3N1H9 Putative uncharacterized protein n=4 Tax=Pasteurellaceae RepID=A3N1H9_ACTP2 Length = 322 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 97/351 (27%), Positives = 158/351 (45%), Gaps = 58/351 (16%) Query: 3 TEATH--DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK-APADLAST 59 TE+TH +N+ + G +L+ ARE L LS + VA++ LK S + +E D ++A T Sbjct: 2 TESTHPMQENQDIPLGQKLKQAREALHLSIEDVAKKTNLKKSHIESLENDIFILQNVAPT 61 Query: 60 FLRGYIRSYARLVHIPE---------EELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD 110 F+RGY+R+Y R + +PE E ++P + P + KV +K + Sbjct: 62 FVRGYVRNYLRFLRLPEALVSTVNYGEVIIPKDAIKTP--SPKVV----------QKSQT 109 Query: 111 GWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEE---------ITTMADQSSAELSSNSEQG 161 W+ T LVL +G++ WWWQD + +QE + A Q++A +++ + Sbjct: 110 KWVKYLTILVLLGAVGMTLLWWWQDYQKEQESREHIVSSSVVEPTATQATAPITAPVVET 169 Query: 162 QSVPLNTSTTTD-PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDT 220 S P+ + + P +T P + A NT A P +V P+ + V+ Sbjct: 170 PSAPVAVAPVMETPKAETTSPMPTENNALNTAA-ATEQPQVSVTPEA------TTEAVNV 222 Query: 221 AATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTA-DCWLEVTDATGKKLFSGM 279 PA A AA + D+ L + T + W+ V + KK + Sbjct: 223 LQQPAIEPAAEQSQAAAVGNDE------------LRIEITGKESWITVKGSKSKKSLAEK 270 Query: 280 QRKDGN-LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +G L G Y+L IGAPA V++ Y+G+ V L +VAR+ L Sbjct: 271 LYSNGEVLTFNGDEQYRLTIGAPANVKLYYKGQEVPLK---IDGRVARIRL 318 >UniRef50_C5BLW0 Transcriptional regulator, Cro/CI family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLW0_TERTT Length = 313 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 141/313 (45%), Gaps = 45/313 (14%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA LR R + GL +AE+ + ++D+E+D A TFL GY+R YA L+ + Sbjct: 20 GAALRIVRLEAGLPLSKIAEQTLIPEWKLQDLEDDTYDRIGAKTFLNGYVRKYASLLKLD 79 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFS-------LGKRRKKRDGWLMTFTWLVLFVVIGLS 128 E + L +Q +R+ VAP QSF+ K R K+ G V+ VV+ L Sbjct: 80 ASEFVGALPEQ--MRS-NVAPAQSFTETAANATAPKPRAKKSGTKRRLP--VIPVVVFLI 134 Query: 129 GAW-----WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 AW + +D E T+ S+ N E+G + P++++ T D S Sbjct: 135 AAWAIAVYFIEDVGPGDNEAGTVEAASNIGELPNDEKG-APPIDSADTEDRGDFDGD-TS 192 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 V P AP V Q+ A+ + SQ TPD P+ Sbjct: 193 VQEIPVLLDLPEADL-APVVATQEPALEAESQ--------------VTPDSTDATPSQ-- 235 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 + L F DCWL+VTDATGK +F+ +Q K NL L G++P+ + +G A Sbjct: 236 ---------DRLNFTFNDDCWLQVTDATGKVVFAQLQTKGDNLQLFGESPFSVMLGNARA 286 Query: 304 VQIQYQGKPVDLS 316 V I+ G PVD++ Sbjct: 287 VAIELNGAPVDIN 299 >UniRef50_C6AJL0 Putative uncharacterized protein n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AJL0_AGGAN Length = 341 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 87/351 (24%), Positives = 158/351 (45%), Gaps = 57/351 (16%) Query: 1 MNTEATHDQNEALT----TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD- 55 MNT+ T + + T G + R ARE L L+ + V++ + L+ + +R IE ++ +D Sbjct: 1 MNTQTTSQEPQTNTRETSLGDKFRQAREALNLTVEQVSKEISLRPAVLRSIENNQFISDT 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK-------- 107 + STF+RGY+RSYA+ + IP+ + + + +Q LGK + Sbjct: 61 IPSTFMRGYVRSYAKFLKIPDSDWVNTI---------NFGHVQKNDLGKNARATRAVNQY 111 Query: 108 -KRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPL 166 + W+ + +V+ +V+G++G WWW+ + E + + + ++ Sbjct: 112 SSHNNWVGYLSVIVVLIVVGMTGMWWWESHQQSNVERDILVNTYTNSVAE---------- 161 Query: 167 NTSTTTDPATTST---PPASVDTTATNTQ---TPAVTAPAPAVDPQQNAVVSPSQA---- 216 +TT+ P T P ++ T T+T T P V+PQ +PS++ Sbjct: 162 --TTTSKPITNEVVVPQPTKIENTLTDTAPKGTNIEIETKPLVEPQIAGSSTPSESTQSS 219 Query: 217 -NVDTAATPAPTA---------ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLE 266 NV + + AT G + + V+T A + L + +CW+ Sbjct: 220 GNVLQSEMNKISGNEQLSMTQTATQASGEQQSAVENSNVSTADASKDNLHIEVIGNCWIS 279 Query: 267 VTDATGKKLFSGMQRKDGN-LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 V D +K+ + + K G+ L+ + PY L IGAP V+I Y+G+ L+ Sbjct: 280 VKDK-NRKVLAQKEYKQGDVLSFNEEEPYSLIIGAPGNVRITYKGEAFPLT 329 >UniRef50_A6VV05 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VV05_MARMS Length = 341 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/345 (27%), Positives = 150/345 (43%), Gaps = 53/345 (15%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + + G RL+ R +L ++ VA L + + VR +E + + TF RG+++SY R Sbjct: 23 DTINIGNRLKAKRLELEFDERHVATELKISIDQVRALEANNFKYFRSITFARGFLKSYCR 82 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 L+ I E+L + + + P+ + K+ D ++ + +++ V++ L Sbjct: 83 LLGIEPSEMLRAFDSEREDAEPTIKPVDK--VNKQTNFGDPIVIFISVVIVAVLVFL--V 138 Query: 131 WWW----------QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +WW + K + E T D + E S G N S + A T Sbjct: 139 FWWPSQSSVSVASNEIKNEVSETATAPDLDATEAFSGESSGSVDTSNVSNSNSGADTDV- 197 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQ-------------QNAVVSPSQANVDTAATPAPT 227 ASVD T + P+V PA + + A V P TA PA Sbjct: 198 -ASVDNTES---VPSVQVEKPASNGGVVTGLSAETMAILEEAGVKPEDVIRATAEVPAEL 253 Query: 228 AATTPDGAAPLP--TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 AA A LP TD+ + F ADCW EV DA+GK LFSG++ Sbjct: 254 AA-----APKLPSYTDEVEIA------------FDADCWTEVRDASGKILFSGVKSAGSQ 296 Query: 286 LNLTGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTL 329 L+LTG+APY++ +G V ++Y+G+ D S F + +AR L Sbjct: 297 LSLTGKAPYRIVLGYAKGVSSLKYKGEVFDFSSFTHKD-LARFEL 340 >UniRef50_UPI0001698B56 hypothetical protein Epers_35392 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B56 Length = 356 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 28/337 (8%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G+RLR RE LG+ Q +A +L L + + +E D + F++GY+++YAR++ +P Sbjct: 22 GSRLRKEREALGIDQMKLAAQLHLSETMIEALEWDDYEVLPSPVFVQGYLKNYARILGVP 81 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 E E++ APL A + + K + G + TW+++ ++ L WW Sbjct: 82 EHEVIDAYRALAPLPEEARALNGNRKVLKEMRSNHGGVRIVTWVIVIALLLLLAIWW--- 138 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP- 194 + Q+ + ADQ++ + S E+G++ P N + P TP T TP Sbjct: 139 QGEQELHDMSTADQATLQ-ESMLEEGEAAPDNPGLSLPPPLEVTPKKIAPATEIEPPTPQ 197 Query: 195 ---AVTAPAP----------AVDPQQN-------AVVSPSQANVDTAATPAPTAATTPDG 234 AV P P VD ++ A ++ V+ APT + + Sbjct: 198 DEAAVVEPPPLTQTLTEETTQVDAREPVGAAAEIAAEQSAEVVVEALQEAAPTTSDAVEA 257 Query: 235 AAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGK-KLFSGMQRKDGNLNLTGQAP 293 + D A A P ++V+ F CW E+ DA+G+ +L M+ D + AP Sbjct: 258 EESVEVDAAPAEPGSAFP-SVVIEFNDSCWAEIRDASGRTRLIGNMKVGDRRVLGNWPAP 316 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Y++ G AV + G DL R N VAR + Sbjct: 317 YRVLFGNAGAVNMSINGDTFDLEPHTRRN-VARFRFD 352 >UniRef50_A6EWG5 Putative uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EWG5_9ALTE Length = 349 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 37/343 (10%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 TG L+ AREQ GLS AVA+ L+ + ++ IE+ K + FL+GY+R+YAR V + Sbjct: 16 TGQLLKRAREQKGLSVSAVADAQHLRPAVIQAIEDGKYEQIDSELFLKGYVRTYARQVDL 75 Query: 75 PEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + ++ L+++ PLR KV ++ L ++R L+L + I + A+ Sbjct: 76 DPDAVIATLDEELEPLRQQKVQAEEANPLIDIERRRRRKRRVAKLLLLMLAIAVI-AFLA 134 Query: 134 QDRKAQQEEITTMADQSSAELSSN---------SEQGQSVPLNTSTT-TDPATTSTPPAS 183 + + IT D + +SS +E+ SV T ++P T + Sbjct: 135 LRFTGELDGIT--GDTAEPTVSSEPNASAQPEPTEEMASVDGTVDTELSEPGTEAALSEP 192 Query: 184 VDTTAT--------------NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA 229 VD + P +PAP V+ P+ VD + P T Sbjct: 193 VDEASIVEDNNELAGLPEQPQVNEPDSGSPAPVVEEDSAPAAQPAAEEVDVSRVPVVT-- 250 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNA-LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 + P P Q A +A L M F+ +CW++VTD+ G +L +QR +N+ Sbjct: 251 -----SEPEPAFQESAQPTAAVGSARLEMTFSDECWVQVTDSAGNRLVGSLQRDGDRINV 305 Query: 289 TGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 +G+ P + +GA A++ I++ G+P+DLS + N A TL+ Sbjct: 306 SGRLPIDVVVGAVDAIESIRFDGQPIDLSGYRVVNNRAEFTLD 348 >UniRef50_B3PDM0 Putative DNA-binding protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDM0_CELJU Length = 314 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 50/323 (15%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 ++++H+ L+ G L ARE+ GL+QQ A+ L + + VR +E D + TF+R Sbjct: 12 SKSSHE----LSPGTILAAARERAGLTQQQAADELYMTLGKVRALEADDYQRLHSDTFIR 67 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 GY+R+YA L+ I ++++ ++QA R V S+ KK W L Sbjct: 68 GYLRAYANLLKIDVDQVIQAYDRQAQ-RLGLVEQYVPRSVDNSNKKI--WQFVGLILAAL 124 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMAD------QSSAELSSNSEQGQSVPLNTSTTTDPAT 176 VV+ L W++ +RKA + + D SS ++SS ++ +PL Sbjct: 125 VVLWLISVWFFDNRKAPEYPLPAALDIAEDIAVSSGQVSSLAQ----IPL---------- 170 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 S PA+VD +T++ + V P A V ++A + +AT+ + Sbjct: 171 -SVQPAAVDVASTSSLSGMV----------------PVSAGVASSAALSVASATSVSESV 213 Query: 237 PLPTDQAGV-TTPVADPNA-----LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 + + A T V DPNA L M F+ +CWLEV+D+ G L + ++R L + G Sbjct: 214 SVSSVAALSRRTVVQDPNAQNLDELYMEFSDECWLEVSDSRGDVLATELERPGNRLLVKG 273 Query: 291 QAPYKLKIGAPAAVQIQYQGKPV 313 +AP+ +K+G AV + G+ V Sbjct: 274 RAPFDVKLGNAKAVTMTLNGQSV 296 >UniRef50_Q8D1Y4 YfgA protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D1Y4_WIGBR Length = 158 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 87/143 (60%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN + + + T G L+ ARE LG SQ+ V+++LCLKVST++DIE + ++L TF Sbjct: 1 MNNDDKEKKINSNTVGKSLKTARENLGWSQEKVSKKLCLKVSTIQDIENNYINSNLDKTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 L GYIRSYARLV + ++ L +E K+ +F + KK+D WL+ TW++ Sbjct: 61 LYGYIRSYARLVKLTDKNFLVLIENNKKNNFNKIKSTSNFKKLIKYKKKDIWLIRITWIL 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEI 143 F++I L+G WWW++ ++I Sbjct: 121 FFIIIILTGMWWWKNYHTNNKDI 143 >UniRef50_Q3SL71 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL71_THIDA Length = 291 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 99/324 (30%), Positives = 145/324 (44%), Gaps = 47/324 (14%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 LT G LR ARE G++ + RL L V +E D A F RG++R+YARL+ Sbjct: 7 LTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVRNYARLL 66 Query: 73 HIPEEELLPGLEKQAPLRAAKVA----PMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + E LL +E AP A+V+ P+Q R W++ +VL V+ Sbjct: 67 GLAPETLLASMEG-APAAPAEVSYAKPPLQ------RPWFASSWVILLALVVLVVLAVPV 119 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQG--QSVPLNTSTTTDPATTSTPPASVDT 186 G + W L+S+ E+G + V ++ TT A +S PPA+ Sbjct: 120 GLYLW--------------------LNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGE 159 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 T A APAP + N + A+ A P + PD AA + AG T Sbjct: 160 APAETPG-APNAPAPV---EGNGATDGTTADGTVAVPPQ----SPPDEAA----EDAGST 207 Query: 247 TPVADPNA-LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 T + A L + F A+ W E+ DATG+ + + ++ + G+ P+KL IG A + Sbjct: 208 TEASTGGAALHLEFGAEAWAEIKDATGRAVLRQLNPAGSSVEVKGEPPFKLVIGNAAETR 267 Query: 306 IQYQGKPVDLSRFIRTNQVARLTL 329 + Y G+PVDL VAR TL Sbjct: 268 LTYNGRPVDLKPHTGMT-VARFTL 290 >UniRef50_Q7VME3 Putative uncharacterized protein n=1 Tax=Haemophilus ducreyi RepID=Q7VME3_HAEDU Length = 323 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 90/319 (28%), Positives = 148/319 (46%), Gaps = 28/319 (8%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK-APADLASTFLRGYIRSYARLVHI 74 G +L+ ARE L L+ + VA++ LK S + +E D ++A TF+RGY+R+Y R + + Sbjct: 23 GHKLKQAREALNLTIEDVAKKTNLKKSHIEALENDIFILQNVAPTFVRGYVRNYLRFLRL 82 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 P+E + + +V+ M S + K + W+ + T L+L I ++ WWWQ Sbjct: 83 PKE-WGDNVNYGEVILPKEVSNMAS-ATTTEHKSQTKWVKSITVLILLAAISMTLLWWWQ 140 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV-DTTATNTQT 193 D + +Q +S + +N Q + L T+ +P ST A++ + + ++ +T Sbjct: 141 DYQQEQ--------KSREQFVNNVTQEEPSALPTA-LVEPEPPSTLEANIAEQSQSSVKT 191 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP-LPTDQAGVTTPVADP 252 ++P A+ P N+ P AA D P LP Q T+ Sbjct: 192 ELHSSPPNTTFDTIEALDEP--VNILQQINPEVAAA---DAIKPSLPDTQEVATS----N 242 Query: 253 NALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGN-LNLTGQAPYKLKIGAPAAVQIQYQG 310 + L + T + W+ V KK +G L G Y+L IGAPA V+I Y+G Sbjct: 243 DELRIEITGKESWIAVKVPNSKKSLVEKLYANGEVLTFNGNEQYRLTIGAPANVKIYYKG 302 Query: 311 KPVDLSRFIRTNQVARLTL 329 +PV L +VAR+ L Sbjct: 303 EPVLLK---IDGRVARIKL 318 >UniRef50_A4BSV3 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSV3_9GAMM Length = 363 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 157/351 (44%), Gaps = 49/351 (13%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR ARE+ LS ++A+ L L+ + +E D T++RGY+ +YARLV++P Sbjct: 24 GLSLRQARERCRLSVASIADTLHLEPRVIEALEADDYSQLPPVTYVRGYLSAYARLVNLP 83 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKR----DGWLMTFTWLVLFVVIGLSGAW 131 +L E+ ++ + + G RR R WL+T F+ + +SG Sbjct: 84 VANVLQAFERVGGEERSQPLTLHAGRAGNRRMARFSIGSSWLLTLA----FIAVLISGWM 139 Query: 132 WWQDRKAQQEEIT------------TMAD---------QSSAELSSNSEQGQSVPLN--- 167 +W ++ E + TM D S L++ + ++P + Sbjct: 140 FWTQGQSTSEVASPDENNAVDAGPDTMLDPKSEPDAAAAGSEILAAPTGADTALPAHRAE 199 Query: 168 -TSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT--- 223 S TT PA S D + +T T+ A + PQ+ A + PS A + TA+ Sbjct: 200 TASLTTQPAAPPGERLSRDPHMSGAETAGETS-AVSPTPQREAPLIPS-AKIGTASIADH 257 Query: 224 -PAPTAATTPDGAAP--LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQ 280 PA AATT G AP + +AG L + + W+ V A G++L G+ Sbjct: 258 KPAALAATTV-GVAPESIAAQRAGAL------ETLKFDASGKSWVTVEAAGGQRLVYGLL 310 Query: 281 RKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + + +TG+ P+++ IG V +++ G VDL + N VAR TL+A Sbjct: 311 ERGESRRVTGRPPFRITIGDATQVMLRHNGTRVDLGPYTHAN-VARFTLSA 360 >UniRef50_A3JJP6 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJP6_9ALTE Length = 343 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 94/332 (28%), Positives = 142/332 (42%), Gaps = 49/332 (14%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +L+ ARE GLS VAE L+ ++ IE K FL+GYIR+YAR V + Sbjct: 15 VGPQLKKAREAKGLSVVEVAEAQHLRPVIIQAIENGKYELIDTELFLKGYIRAYARQVGL 74 Query: 75 P--------EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 EL P E+QA +AA P+ + +RR K+ T WLV V+G Sbjct: 75 DGNALIADLNRELEPMREEQAQAKAAN--PL--IDIERRRCKKRRVAKTAFWLVALAVLG 130 Query: 127 ---------------LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNT--S 169 L GA + AQQ + + + + + +S QS P N + Sbjct: 131 FLIFAFIYSPSQLANLPGAGAFTGDTAQQNALESGLNGAVSSTDDDSTT-QSTPDNFLPN 189 Query: 170 TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVD----PQQNAVVSPSQANVDTAATPA 225 T+D +++P A P + A P + SPSQ + A Sbjct: 190 ETSDGDVSASP-----ANAEGALEPLIAAGTGTFSDGEAPADGSGSSPSQTVGNLTAIVD 244 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 +T AP D G L + F DCW+++ DA G+ L SG++R+ Sbjct: 245 NDLSTLDAEEAPQVADNRG---------RLEIEFIDDCWVQIRDAYGRSLASGLKRQSDR 295 Query: 286 LNLTGQAPYKLKIGAPAAV-QIQYQGKPVDLS 316 ++L + +L IGA A+ ++++G PVDL Sbjct: 296 IDLRSETDIRLVIGAANAIGAMRFEGAPVDLG 327 >UniRef50_Q57065 Uncharacterized protein HI0367 n=17 Tax=Pasteurellaceae RepID=Y367_HAEIN Length = 303 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 32/306 (10%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK-APADLASTFLRGYIRSYA 69 + L+ G R RE L LS + VA+ + L+ S + +E ++ + F++GY+RSYA Sbjct: 7 QVLSPGEIFRQTREALNLSLEDVAKEITLRPSILEQLENNEFIQKSTPAIFVKGYVRSYA 66 Query: 70 RLVHIP----EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 + + +P E + EK + A+ S + + W+ T +V +VI Sbjct: 67 KFLRLPDSVWENIVFAETEKNDLGKNAR-----STRAVNQYSSHNRWIGRLTAIVFMIVI 121 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 G++G WWWQ + +E + A +N V S T P T + P S Sbjct: 122 GMTGLWWWQSYQQNTQERDDLVQSYVASTENNQPATALVTTEESNKTVPETAA--PVSQP 179 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 TN P + Q+N+V P N + + + +A P +P Sbjct: 180 VEITNNLLPEIA--------QENSVSQPK--NDEKSVSEIQSAVENP-SISP-------- 220 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 T P+A + ++ T W+ V D + + + + K G + + L +GAP+ V+ Sbjct: 221 TLPIAKGDLVIEILTNSSWISVKD-NARHVLAQKEYKQGEILTFNGNEFSLIVGAPSNVR 279 Query: 306 IQYQGK 311 I Y+G+ Sbjct: 280 ITYKGE 285 >UniRef50_Q1ZDU0 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZDU0_9GAMM Length = 305 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/315 (26%), Positives = 141/315 (44%), Gaps = 57/315 (18%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIE-------EDKAPADLASTFLRGYI 65 L G L+NAR Q S Q V E+L + + + +IE E+K + + +LRGY+ Sbjct: 13 LPLGQALQNARMQREFSVQDVVEKLNIHKNIIENIEFSVEKILEEKKCSPI---YLRGYL 69 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAK--VAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 ++ARLV + + + + LR K +A F+ + + G + F+ LV+ + Sbjct: 70 VNFARLVGLDDLDTFEEFTSLSALRKEKKVLAKPSLFTPALNKSQHTGAI--FSTLVIML 127 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 + L +W Q + D S +++ N+ SV L Sbjct: 128 LGALIVNYWQQ-----------IYDFSKFDININN----SVEL----------------- 155 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDT-AATPAPTAATTPDGAAPLPTDQ 242 D A A+T P VD ++ V PSQA+ + AP T + + Sbjct: 156 -DEQAREIHNMAITIP---VDNIEDESVVPSQADEKSLVKESAPIQKTEQSLKSEVSVKV 211 Query: 243 AGVTTP---VADPNALV---MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 A TP V + LV + ++ADCW E+ DA K++ G+ ++ L L G+ P++L Sbjct: 212 ANKETPKDIVENKPLLVSMSLTYSADCWTEIKDAKNKRVAFGLYKRGRVLTLQGEPPFQL 271 Query: 297 KIGAPAAVQIQYQGK 311 K+G P+ V+IQYQ + Sbjct: 272 KLGDPSVVEIQYQNE 286 >UniRef50_A7JX56 Putative uncharacterized protein n=2 Tax=Mannheimia haemolytica RepID=A7JX56_PASHA Length = 332 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 146/332 (43%), Gaps = 29/332 (8%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK-APADLASTFLRGYIRSYAR 70 AL+ G +L+ ARE L LS VA++ LK S + +E D ++A TF+RGY+R+Y + Sbjct: 13 ALSLGQQLKAAREALNLSITDVAQKTNLKKSHIESLENDIFILQNVAPTFVRGYVRNYVK 72 Query: 71 LVHIPEEELLPGL---EKQAPLRAAKVAPMQ--SFSLGKRRKKRDGWLMTFTWLVLFVVI 125 + +PE L+ + E P KV+ ++ S S GK K ++ + Sbjct: 73 FLRLPES-LISSVNYGEVTIPKEVTKVSSVKPSSNSQGKTLKYLTVLVLLAA-------L 124 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTST-TTDPATTSTPPASV 184 G++ WWWQ + +QE + +N+ TS P S PA V Sbjct: 125 GMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATNNDASAQTSVPVQQPIQVSEQPAQV 184 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA-----PLP 239 T + PA+T V+P Q A +Q +V ATT A Sbjct: 185 AETVVAAE-PALTE---KVEPTQAASSPVTQEDVKVVEEVKQADATTAQVEAVNVLQQSQ 240 Query: 240 TDQAGVTTPVADPN-ALVMNFT-ADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 ++QA PVA N L + T + W+ V A K+L + L+ Y+L Sbjct: 241 SEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNKRLAEKLYNNGETLSFNENEQYRLT 300 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 IGAPA V++ Y+G+ V L R VAR+ L Sbjct: 301 IGAPANVKVYYKGQEVPLKIDGR---VARIHL 329 >UniRef50_Q1H0U8 Putative uncharacterized protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0U8_METFK Length = 300 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 38/316 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L ARE LGL + VA RL L + V+ +E D A + RG+IR+YARLV+I Sbjct: 21 IGPTLVAARESLGLGAEDVANRLRLSLRQVQALENDDFAALPEAVITRGFIRNYARLVNI 80 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 LL + P++ ++ + S ++ + W + W + +V+ ++G + Sbjct: 81 DAAPLLRVYSQYVPVQDSQAISIPSANIVISGEAGAPW-RPYMWFGILLVVLMAGWVLYV 139 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT-DPATTSTPPASVDTTATNTQT 193 D + T +++ A +S E P + + DP PPA D A Q Sbjct: 140 DFYQAHDPDTGLSEAIVAPISDKDELISGKPEAEALASPDP----MPPAPTDEPAAVEQP 195 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 AV A AV+ TP P Q + P A+ Sbjct: 196 AAVPATPSAVE-------------------------ITP------PIAQPALALPAAEDA 224 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 + T W+ V+DA GK++ S + +TG+ P+++ +G +++Y PV Sbjct: 225 RIKFTVTEATWVSVSDANGKQIMSKTLEPNSEEVVTGKPPFRIVVGNIHGTKLEYNNNPV 284 Query: 314 DLSRFIRTNQVARLTL 329 DL+ + + N VARLTL Sbjct: 285 DLAPYAKVN-VARLTL 299 >UniRef50_A4XY33 Helix-turn-helix domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XY33_PSEMY Length = 329 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 100/334 (29%), Positives = 147/334 (44%), Gaps = 42/334 (12%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEE---DKAPADLASTFLRGYIRSYARLV 72 G LR ARE G S VA +L L + IE DK P +TF RGYIR+YA+L+ Sbjct: 18 GESLRQAREIKGWSVAEVAMQLNLTPQRLAQIEAGAFDKLPG---TTFARGYIRAYAKLL 74 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRR---KKRDGWLMTFTWLVLFVVIGLSG 129 + + L+ ++ SLG+ + L ++L+L +IG +G Sbjct: 75 ELDQNRLVLEFDQ---FTGTDATGSNVHSLGRIEEPVRYSQSILRLVSFLLLLALIG-AG 130 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQS-------------VPLNTSTTTDPAT 176 WWQ+ Q +T++AD + G + V + + P Sbjct: 131 FLWWQE---QGRSVTSLADLGLEHVEVEGADGTTQVHSLAEPEDQAVVAAQGNESASPLL 187 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 P T TQ PA A A P +A +Q DTAA P AA P Sbjct: 188 LPIEPGEAPEAVTETQQPAAEGTAAAPTPAPSAAPEATQP--DTAAAPQAPAAPEPAAPV 245 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 + Q AL + FTADCW +VTDA GK L S ++R + LTG+AP +L Sbjct: 246 EVAPGQ----------GALSVQFTADCWTQVTDADGKVLLSALKRSGERIELTGKAPMEL 295 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++G Q+++ G+ VD++ ++ T + ARL L Sbjct: 296 RLGFARGAQVRFNGENVDVAPYM-TGETARLKLG 328 >UniRef50_B5EJF2 Transcriptional regulator, XRE family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJF2_ACIF5 Length = 326 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/324 (28%), Positives = 137/324 (42%), Gaps = 75/324 (23%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE G S + VAERL + + V+ +E+ A + F RG++++YARL+ + E Sbjct: 13 LRAAREAHGWSLRQVAERLHITEAQVKGLEDGDYTALPGAAFARGFLKNYARLLGLDPEP 72 Query: 79 LL---------PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 LL GL + A P+ +S RR ++ F+ L++ VI + Sbjct: 73 LLKTYDASNEGSGLHPSETVLPASEGPLLDYS---RR------VLIFSVLIVISVIAV-- 121 Query: 130 AWW-WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 AWW W + +Q Q +P+ T P P AS Sbjct: 122 AWWVW-----------------------SHQQLQGLPV---TAVSPMVAKHPAASAKVV- 154 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 T P+V+A A+V P P A P AP+P ++ Sbjct: 155 --TIAPSVSA----------------AASVPAIGNP-PAAPGLP--VAPVPATRSAA--- 190 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQAPYKLKIGAPAAVQIQ 307 VA L F+ADCW++V D+TGK L + + + L + +G PY + +G +A+ I Sbjct: 191 VATGPGLTFQFSADCWVQVKDSTGKTLLAVLGHRGDVLRVDSGTPPYNVLVGKASAITIS 250 Query: 308 YQGKPVDLSRFIRTNQVARLTLNA 331 Y K V L VARL + A Sbjct: 251 YDDKSVPLPA--NALGVARLQIGA 272 >UniRef50_D0KWA6 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA6_HALNC Length = 380 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 96/349 (27%), Positives = 147/349 (42%), Gaps = 45/349 (12%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA ++ AR GLS +A+ L L + V +E ++ ++R Y++ +A +V Sbjct: 43 GALIQEARTAKGLSAADLAQSLNLDLKIVERLEANQFEGGPEPIYVRAYLKHWAGIVGAD 102 Query: 76 EEELLPGLEKQ-----APLRAAKVAPMQ-------SFSLGKRRKKRDG-----WLMTFTW 118 + L + Q AP + AP++ S ++ + G WL+ Sbjct: 103 PQVWLQAYQLQHGGNVAPNKIGVTAPIEVMTAHKTSHTVHSTNQNNVGRTILRWLLALVV 162 Query: 119 LVLF---VVIGLSGAWWWQDRKAQQEEITTMA-DQSSAELSSNSE-QGQSVPLNTSTTTD 173 LV+ + I L W Q+ ++ ++ Q L+ N E G +V L Sbjct: 163 LVIILAVIAIALPSVW--------QKGLSLLSGKQEQTPLTLNGETSGSTVSLPVQPLPA 214 Query: 174 PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 T + P +V T TN P P V P N S + T TPA T TTPD Sbjct: 215 LNTPAEPSKAVTQTTTNEAPPPPPLATPLVAPAANDSASTPPSVTSTTNTPAQTEPTTPD 274 Query: 234 GAA---PLPTDQAGVTTPV-------ADPNALVMNF-TADCWLEVTDATGKKLFSGMQRK 282 AA P P D TP A LV+ +ADCW+EV DA GK+L + +K Sbjct: 275 TAASTTPTPAD----ATPAEQTAPAAAPNANLVIKVDSADCWVEVRDAAGKRLVYDVIKK 330 Query: 283 DGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + G P+ + +G P+AV + ++G+PV L T V R T+ Sbjct: 331 GEERTVPGAGPFTITLGNPSAVTVLWKGEPVKLGAPNSTTGVIRTTVGG 379 >UniRef50_B2U9U8 Transcriptional regulator, XRE family n=6 Tax=Ralstonia RepID=B2U9U8_RALPJ Length = 360 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 98/343 (28%), Positives = 146/343 (42%), Gaps = 54/343 (15%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 RLR RE+ L+ +A RL + + +E A TF +G +R+YAR + + + Sbjct: 40 RLRAGRERQRLTVDDLATRLKVAPGKLLAVESADVSALPDMTFTKGLMRAYARALQVDVD 99 Query: 78 ELLPGLEKQAPLRAAKVAPM----QSFS----LGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 + + L +AP+ + P +SFS KRR WL+ L VI +G Sbjct: 100 DQVARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGNGRWLIG----ALVAVIVAAG 155 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPATTSTPPASVDTTA 188 A DR Q T A Q++ + + Q+ P + T+ A + TP AS+ T Sbjct: 156 ALAGMDRLKQWFATQTAATQNTESTAKETPAAEQTAPAQVAPATEQAPSETPAASMPTPL 215 Query: 189 TNTQTPAVTAPAPAV---------------------DPQQNAVVSPSQANVDTAATPAPT 227 T TPA APA V A P+ NV+ AP Sbjct: 216 TPV-TPA--APASGVVTAPLAPPPTLPRSDNGAVPAPAVAAAGGKPAVINVE-----APV 267 Query: 228 AATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN 287 AA + A P + V+ + F+ W E+ D TGK L SG+ ++ + Sbjct: 268 AALPTEAAKPAESGGGSVS----------VRFSGSSWYEIKDKTGKTLASGISKEGDARD 317 Query: 288 LTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTL 329 LTG P+K+ G AV+ + G VDL ++ R N+VAR TL Sbjct: 318 LTGTPPFKVVFGNAGAVESLAVGGATVDLQKYAR-NRVARATL 359 >UniRef50_Q2SDW3 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDW3_HAHCH Length = 330 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 54/351 (15%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M++EA + G+RLR ARE LG S AERL + V+ IE+ + F Sbjct: 1 MSSEAASNPAANDRPGSRLRQARENLGWSIPETAERLHVIPRYVKAIEDGEHGQLPGLVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAA-----KVAPMQSFSLGKR---------- 105 L+GY+R+YARLV++ E+ ++ LE++ L A + AP S+ + Sbjct: 61 LKGYVRAYARLVNLSEDRVIEDLEQELSLGDAGFTEERAAPTPSYEEKPKSGGGLWLILL 120 Query: 106 -RKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSS--------AELSS 156 G + F V G +G Q+ + E + S AE S Sbjct: 121 ALAVAAGLIYYFLSGRDIVSTGSTGT-TMQEPEIPSEVVVVPGGSSDAIEPPAPVAEKDS 179 Query: 157 NSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT-QTPAVTAPAPAV-DPQQNAVVSPS 214 ++ + + + L+ ST + +P + T T +T A P P DP Sbjct: 180 SAVESEPMLLDGSTLEEEGQEPSPEDLLQPEDTGTAETSASEQPPPVTEDP--------- 230 Query: 215 QANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKK 274 + PAP++A+ P QA + A+ F DCW ++ D + + Sbjct: 231 -----VSVEPAPSSASE------QPAPQAAIGK-----VAVRATFVGDCWFDLRDKSNNR 274 Query: 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF-IRTNQV 324 + G+ R+ ++ G+ P + IGA AV+++ GKP+D ++ +R N+V Sbjct: 275 VV-GLYRQGDVVDFQGEYPLRFIIGAVDAVKLEVNGKPLDFGQYRVRNNRV 324 >UniRef50_C6XEI7 Putative uncharacterized protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEI7_METSD Length = 336 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 144/334 (43%), Gaps = 32/334 (9%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 + A + GA LR AREQ GLS + RL + + +E D T RG+IR+YA Sbjct: 20 SHASSIGAILRAAREQKGLSVIDIHARLRISERQIHALETDDFSLLPEPTIARGFIRNYA 79 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 + + I E LL Q P K + S ++ + + W + + + V++G +G Sbjct: 80 KFLEIDAEPLLAAYRAQMPSEEQKNISIPSANIPITQSRTTDW-KKYIYASVLVLLG-AG 137 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 W D SS+E+S QG+S+P + P A ++ AT Sbjct: 138 VWLLYDENLIPGIPDLHLGSSSSEVSP--AQGESLP----------QAALPAAERESAAT 185 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP------------ 237 Q PA A A+ P+Q + + + + A PA TP AP Sbjct: 186 --QAPA-QGEALALPPEQTSDQAGAAPAAEPQAAPAAAVPATPSAIAPAVQPLPATPAAT 242 Query: 238 --LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + A TT + + + FT D W+ + D GK++F+ +R + G+ P K Sbjct: 243 SAPASTNADSTTSSVALHKVRLVFTEDSWVSIVDRHGKEIFNKTKRAGSEDAVEGEPPLK 302 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + IG A Q+ Y KPVD + + R N V R+TL Sbjct: 303 VTIGNAAGSQLIYDDKPVDTAPYNRLN-VVRITL 335 >UniRef50_A0YCF8 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCF8_9GAMM Length = 282 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 57/315 (18%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G LR RE++G S + +AE+L L V +E D F RGY+++YA L+ Sbjct: 8 TPGQLLRVERERMGFSVRQMAEKLHLLPYQVEALEADDYLILNGDIFCRGYLKTYAGLLG 67 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG-----WLMTFTWLVLFVVIGLS 128 + + L+ P R PM + S + ++ G W + + +V+ V+ Sbjct: 68 MDAKLLVDAYMSIRPERPENDYPMTA-STSQIQRPHKGRSIQYWCLAASLVVIVVL---- 122 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 W++ R S G V D + + A+ Sbjct: 123 --WFYGSRV--------------------SVDGGEVVGVAEFIVDGSGENAVAATGKRRK 160 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 T +++AP AV +Q+ ++ A D + A T+P+G Sbjct: 161 DKTTADSLSAPETAVGNRQSNIIGLLPA--DISLDERDIAVTSPEGL------------- 205 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 L F+ DCW++VTD LF+ +++ + L L+G AP+ + +G A V+++Y Sbjct: 206 ------LSFRFSGDCWVKVTDGQNVVLFAELKQAEERLQLSGVAPFNVLLGFAANVEMEY 259 Query: 309 QGKPVDLSRFIRTNQ 323 G+PV IR NQ Sbjct: 260 NGEPVS----IRVNQ 270 >UniRef50_A1SU38 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU38_PSYIN Length = 375 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 12/146 (8%) Query: 177 TSTPPASVDTTATNTQTPAVTAPA--------PAVDPQQNAVVSPSQANVDTAATPAPTA 228 T+ A VDTT + + + A AVD N V S N T + Sbjct: 219 TTVSEAVVDTTVSEAVVGTIVSKAVVDTTISEAAVDKNINETVIESTVN----QTSSANK 274 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 T + + L ++ + P A +L ++F+ADCW E+ DATG++L G+ ++D L++ Sbjct: 275 INTENISVKLENNEQLESPPTAISESLYLSFSADCWTEIVDATGERLAFGLYKQDDILSI 334 Query: 289 TGQAPYKLKIGAPAAVQIQYQGKPVD 314 G AP+++K+GAP+AV ++YQGK ++ Sbjct: 335 DGIAPFEIKLGAPSAVVVKYQGKRIE 360 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA----PADLASTFLRGYIRSYARL 71 G L NAR + LS + VA L LK S VR++E+D + A +LRGY+ +YA+L Sbjct: 13 GLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKYAPIYLRGYLANYAKL 72 Query: 72 VHI 74 V + Sbjct: 73 VAL 75 >UniRef50_C5V4P9 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4P9_9PROT Length = 299 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 82/319 (25%), Positives = 132/319 (41%), Gaps = 58/319 (18%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LR ARE +G+S V ++ L + +E D + FLRG++RSYA+L+ Sbjct: 37 SVGCILRTARESMGMSIDDVVVKIKLAPRQIIALEADDFQVLPETAFLRGFVRSYAKLLQ 96 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + + LL L + + + K ++++ L++ LV V+I + AW Sbjct: 97 LDAQPLLDALPGAVVVNTVQAKVEEPLPTEKTSRRQNINLLSAALLVT-VLIAVFAAW-- 153 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 Q+ QQ P A++D A++ Sbjct: 154 QNSTPQQ---------------------------------------PVATIDLAASDV-- 172 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP- 252 A P D + V S +D AA+ +P A P+ + T A Sbjct: 173 ----ASLPMPDQVEMLVASEVSEVIDVAAS-SPVVA-------PVSMVMSASTVAAAKTV 220 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 +AL + F + W E+ D +GK L + L + G APY + IG +AV + Y KP Sbjct: 221 SALRLVFDKESWAEIKDQSGKVLARQVNAPGSELRVEGVAPYTMVIGHASAVHLFYGEKP 280 Query: 313 VDLSRFIRT-NQVARLTLN 330 VDLS ++ + VAR+TL Sbjct: 281 VDLSSYVNAGSDVARVTLE 299 >UniRef50_Q3YJ01 Putative uncharacterized protein (Fragment) n=1 Tax=Haemophilus parasuis RepID=Q3YJ01_HAEPR Length = 201 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 22/193 (11%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA-DLASTFLRGYIRSYARL 71 L+ G +L+NARE L L+ + VA + LK S + IE D + F+RGY+R+Y R Sbjct: 9 LSLGQQLKNAREALNLTIEDVARKTNLKKSHLEAIENDIFILPSVPPAFVRGYVRNYVRF 68 Query: 72 VHIPEEELLPGL---EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + +PE L+ + E P K AP+ K K + W+ TW+VL +G++ Sbjct: 69 LRLPET-LVNSVNYGEVTIPKEVRKAAPIAV----KNHKSQMRWVKGLTWIVLLSAVGMT 123 Query: 129 GAWWWQDR---KAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 AWWWQ+ +A +E++ +++A++ E+ Q P+ T PA P +V Sbjct: 124 LAWWWQEHQKDQANREQLIVNTTEATAKV---VEEPQVTPVEPQPT--PAEV---PQAVT 175 Query: 186 TTATNTQ--TPAV 196 A N + TPAV Sbjct: 176 LPAKNAEPATPAV 188 >UniRef50_B5JY14 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY14_9GAMM Length = 327 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 90/330 (27%), Positives = 145/330 (43%), Gaps = 45/330 (13%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LRNAREQ +S ++++L L ++ +E + A A TF+RGY+R+ + Sbjct: 24 SVGDTLRNAREQQQISAVDLSDKLKLSTQLIQALESEDFDALPAPTFVRGYLRAIGSELG 83 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW- 132 + + L+ + P + S S R++ LM ++ + + VV+ + W Sbjct: 84 LDTDALVEAYSNRVP---EDELALSSTSTAARQRSSKDPLMVWSTVAIVVVLTVLVVVWS 140 Query: 133 -----WQDR---KAQQEEITTMADQSSAELSSNSEQGQ---SVPLNTSTTTDPATTSTPP 181 QD+ +A QE +Q E S+++QG + L S Sbjct: 141 LGFFPGQDKPEPQANQE-----VEQQQPESESDADQGLPDIQIQLEES------------ 183 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 DT AT A AP+ VD + + S + DT + A A++ A L T+ Sbjct: 184 ---DTAATGNS--AAVAPSEPVDSESESEPSVTADADDTESEEATQEASS---APTLSTN 235 Query: 242 QAGVT---TPVADPNALVMNFTADCWLEVTDATGK-KLFSGMQRKDGNLNLTGQAPYKLK 297 Q PV D + LV+ T W EV DA +F + ++ L LTG+AP+ L Sbjct: 236 QVATIHPEAPVGD-DTLVLTMTGSSWAEVKDANEYAHVFGTIGPRNSPLRLTGKAPFDLF 294 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARL 327 +G V I Y + D S +IR+N VA+ Sbjct: 295 LGDARQVAITYNDRSFDHSSYIRSNNVAQF 324 >UniRef50_C6MCA6 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCA6_9PROT Length = 408 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/317 (23%), Positives = 131/317 (41%), Gaps = 27/317 (8%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LR AR + +S + V+ +L L + + IE + TFLRG+IR+YA LV Sbjct: 117 SVGHLLRRARVRKNMSIEDVSRQLRLSIQQIEAIENEDFEKLPGKTFLRGFIRNYANLVQ 176 Query: 74 IPEEELLPGL-EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 + +LL L E + + P ++ L + + + V+ ++ L + Sbjct: 177 LNPMQLLQLLPESTRIISTYERTPFRNKQLSFSSSRENSGNNSLVIAVILAIMVLGTYFI 236 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 +++ ++ + ++ SA S + + L ST D T P + TNT Sbjct: 237 FENNGWNKD--SNISSVGSAAQSESGTTSMEIRLPMSTAAD--NTVNLPIMLSVAPTNT- 291 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 + P AV ++ N T PA + L +++ +D Sbjct: 292 ---LNDPGKAV----------AELNAKTELIPAEENIIAQ--SNELQNEKS------SDS 330 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 L F AD W++V DA G LF + + + G+ P + IG + V + Y K Sbjct: 331 GNLYFKFIADSWVKVVDAKGVALFEQLMKGGSEQIVVGKRPLSIVIGNASGVNLTYNDKE 390 Query: 313 VDLSRFIRTNQVARLTL 329 +++S + + + AR L Sbjct: 391 INISSYKKQDGTARFIL 407 >UniRef50_Q608X3 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q608X3_METCA Length = 294 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 115/287 (40%), Gaps = 52/287 (18%) Query: 33 VAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQA----- 87 VA L L V TV +E D + F+RGY+R YARL+ +PE+E++ + A Sbjct: 35 VARELHLSVGTVGALERDDYASLPPPAFVRGYLRGYARLLGLPEQEIVDAYNRVAGGGSD 94 Query: 88 PLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMA 147 P A V G+ W V++G++G W +Q ++ Sbjct: 95 PEPGAVVR-------GQSEASPTSWFGPLG----LVLLGMAGIWGYQHWRSS-------- 135 Query: 148 DQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQ 207 Q S E S E + VP+ +PA T + A P PAP +P Sbjct: 136 -QISGEAPSPVELSEPVPV------EPAVNGTAMPGREEVA-----PPTGGPAPVSNP-- 181 Query: 208 NAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEV 267 A D +PA + + Q V T L ++F+ + W V Sbjct: 182 -------MAAADALGSPAASPYPSTQPQPSPQPLQPEVDT-------LTLSFSGESWASV 227 Query: 268 TDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 TDA GKKL + + G+AP+K+ +G PA +++ G+ D Sbjct: 228 TDAEGKKLLFENVTEGQVKTVQGKAPFKITLGRPADTHLEFNGQAYD 274 >UniRef50_A9D324 Putative uncharacterized protein n=1 Tax=Shewanella benthica KT99 RepID=A9D324_9GAMM Length = 225 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 L ++ +ADCW++VTDA G L + +++ LN+ G+AP+KL +GAP AV I+ G+ V Sbjct: 148 LALSLSADCWIKVTDAAGNILINDLKKAGSQLNVAGEAPFKLTLGAPQAVSIELNGEAVS 207 Query: 315 LSRFIRTNQVARLTL 329 L R + +VARLTL Sbjct: 208 L-RDYPSGRVARLTL 221 >UniRef50_C6NZ97 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ97_9PROT Length = 344 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 86/341 (25%), Positives = 133/341 (39%), Gaps = 64/341 (18%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 L G LR REQLG+S +AER+ V +E + FLRG++RSYAR++ Sbjct: 22 LDVGLTLRQTREQLGMSVHDIAERIKFAPRQVEALEANDFEHLPEPAFLRGFVRSYARVL 81 Query: 73 HIPEEELLPGLE----KQAPLRAAKV-APMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 + + L+ L KQ ++ V P + +R + WLV + + L Sbjct: 82 QLDDVALVASLPSAPGKQVTIKTQAVNVPFPTLQSLRR--------INVMWLVGALGVAL 133 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT--TDPATTSTPP---- 181 W+ + + + S +SVPL + T + PA T P Sbjct: 134 VLGWF------------VLMHKVDTTVKSAKVVVESVPLPATETAVSAPADTGAQPVAAE 181 Query: 182 -----------ASVDT--------TATNTQTPAVTAPAPAVDPQQNAVVSPSQANV---D 219 ASV+T +AT T+ PA +P++ P A + + Sbjct: 182 PAGIIEREKQHASVETAEPEKRHESATATEADKTAKPAKVAEPEKK----PEPAKIKQHE 237 Query: 220 TAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGM 279 A P AA+ P A + + + L FT W EV D+ G L S Sbjct: 238 VKALPQIDAASAPAVAV-----KTEIPLEILKRRPLHFVFTESAWAEVIDSHGAVLLSRN 292 Query: 280 QRKDGNLNLTG--QAPYKLKIGAPAAVQIQYQGKPVDLSRF 318 + + G PY + I P V++ Y+G+ VDLS + Sbjct: 293 NPRGTEKWIGGPRHEPYDISISHPEHVKLYYRGQEVDLSAY 333 >UniRef50_B0KPI6 Transcriptional regulator, XRE family n=22 Tax=Pseudomonadaceae RepID=B0KPI6_PSEPG Length = 344 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + + FTADCW +V+D GK LFS ++RK NL LTG+ P+ +++G Q+ Y G+ VD Sbjct: 269 VAIQFTADCWTQVSDGNGKVLFSAIKRKGDNLELTGKPPFAVRLGFARGAQVSYNGQAVD 328 Query: 315 LSRFIRTNQVARLTLN 330 ++ F + + ARL L Sbjct: 329 VAPFT-SGETARLKLG 343 >UniRef50_C5S9Y0 Transcriptional regulator, XRE family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9Y0_CHRVI Length = 360 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 93/354 (26%), Positives = 138/354 (38%), Gaps = 56/354 (15%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G RLR RE L + VA +L L+ V IE D+ A F+ GY+++YARL+ Sbjct: 21 TPGRRLRALRESRKLDVERVAAQLHLQRHVVEAIEGDQYERLPAPVFVVGYLKNYARLLG 80 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 ++ P+R +V + S+ + G G W W Sbjct: 81 ADPAPIVTAYRAMVPVR--EVGLSHALSVPDDSSQSSG----------------GGRWVW 122 Query: 134 QDRKAQQEEITTMA-----DQSSAELSSN----SEQGQ------SVPLNTSTTTDPATTS 178 + MA QS + L S+ S +G+ + P S T+ AT + Sbjct: 123 AVAVLLVGVVAGMATLWLRGQSDSTLQSDALALSPKGEESASTVAAPAKPSDTSGVATAA 182 Query: 179 T---------------PPASVDTTATNTQTPA----VTAPAPAVDPQQNAVVSPSQANVD 219 PP S+ +Q+PA PA V + A+ Sbjct: 183 NATSVSAAGPESTIAAPPESIPLRGAQSQSPAGATPAEPAEPAAPATPAPVETLVAASTL 242 Query: 220 TAATPAPTAATTPDGAAPLPTDQAGVTT-PVADPNA--LVMNFTADCWLEVTDATGKKLF 276 T+A A + A+ VT P +P + +V+ FT W++V A G + Sbjct: 243 TSAQSTTNEALADEEASDAEAQAESVTEEPAPEPTSTEVVLEFTGTSWIDVRGAGGGVVL 302 Query: 277 SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G R L G+ PYK IG +A Q+ G+P DL R R N VAR TL+ Sbjct: 303 NGEMRSGDRRVLDGEPPYKFVIGNASATQLTIGGRPFDLQRRARGN-VARFTLD 355 >UniRef50_Q1LLJ0 Transcriptional regulator, XRE family n=2 Tax=Cupriavidus RepID=Q1LLJ0_RALME Length = 351 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 98/344 (28%), Positives = 150/344 (43%), Gaps = 33/344 (9%) Query: 5 ATHDQNEALT--TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 AT EA+ GA+L++ARE LS + V+ RL + S + IE + TF + Sbjct: 21 ATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAASKLVAIESGNVSSLPDVTFAK 80 Query: 63 GYIRSYARLVHIPEEELLPGLEKQA---PLRA----AKVAPMQSFSLGKR---RKKRDGW 112 G +R+YAR + + + LL QA P+ + A Q+F KR + G Sbjct: 81 GVMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGALNQAFDDRKRFGSKGTGGGA 140 Query: 113 LMTFTWLV-LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 + WLV + +IG+ G + + KA E + A + + + E+ Q N T Sbjct: 141 GGRWVWLVCVLALIGVGGYFGFDHAKAWVEA-RSKAAAEAPKPAVAEERAQEQSNNDGTV 199 Query: 172 TDP----ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPT 227 + T + PA +T + + PAPA +V+ +A + A TP Sbjct: 200 SAALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGLPMVTGGEAPAEAAKTP--- 256 Query: 228 AATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN 287 AAT P D AG A+ + F+AD W EV D TGK + G + ++ Sbjct: 257 AATPPATVPAAQGDSAG---------AVQIRFSADSWYEVRDRTGKVILGGTAKAGDTVS 307 Query: 288 LTG-QAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTL 329 G PYK+ +G V+ + + G V+ R N VARLTL Sbjct: 308 GGGAGGPYKIILGNVKGVESLTHNGAAVNFQASNR-NNVARLTL 350 >UniRef50_A1K3Y8 Transcriptional regulator n=2 Tax=Rhodocyclaceae RepID=A1K3Y8_AZOSB Length = 302 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 137/326 (42%), Gaps = 54/326 (16%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G +LR ARE G S+ VA+ L L + V +E+ A F+RG++R+YAR + + Sbjct: 18 GQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGPAFVRGFMRNYARHLGLD 77 Query: 76 EEELLP---GLEKQAPLRAAKV---APMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 LL G E AP+ A V A +RR R G T ++LF V+ Sbjct: 78 PAPLLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLG--ATLAVILLFAVL---- 131 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSV-PLNTSTTTDPATTSTPPASVDTTA 188 A W+ D ++ NS+ G++V P +P T P Sbjct: 132 AGWYFDWF-----------RTDPPPGLNSDVGETVLPPAGDVAVEPVPTEPAP------- 173 Query: 189 TNTQTPAVTAPAPAVDPQQN-----AVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 PA APAP V+ Q A A +A PA + DG A T Q Sbjct: 174 ----VPAGGAPAP-VEQQPGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQPATPQ- 227 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 L+ F + W+EV D +G ++SG+ ++ G+ P+ L +G Sbjct: 228 -----------LLFRFGGESWVEVRDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKD 276 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTL 329 V++++ G+ +DL R VARLT+ Sbjct: 277 VRLEFNGREIDLQPHTRV-AVARLTV 301 >UniRef50_C0N2P2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2P2_9GAMM Length = 309 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 76/319 (23%), Positives = 135/319 (42%), Gaps = 27/319 (8%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G+RL+ ARE S VA +L L V +E + T+ RGY SY + + Sbjct: 17 TIGSRLQQAREAKKYSVAEVAAQLRLNKDIVTYMENQQWDKLHGRTYARGYFASYVKFLG 76 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 +P +E+L + + F G + R F W +L ++ + W Sbjct: 77 LPFDEMLAVFNDE---YQTSEPSLNLFQHGHDQLDRQ-----FPWFMLALIATVMVVIWL 128 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 ++ QQ ++ A S AE S N E+ + +++ DP+ P Sbjct: 129 AFQQWQQTQVVQQA--SMAE-SDNVEEADNF---STSIVDPSDAIESP----------NQ 172 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 P +++ +Q + + + + + T+A + TDQ + + Sbjct: 173 PMISSAEQT--AEQLGISANNLDEITATEVASSTSAALERNSQMTVTDQQANEPVSTEES 230 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 L ++F+ +CW+EVT+A + L S + R D +L L P + +G A + + + V Sbjct: 231 TLQLSFSGECWVEVTNADSQVLVSKVMRADQSLLLKSDQPLSILLGRAKAASVTFNNQTV 290 Query: 314 DLSRFIRTNQVARLTLNAE 332 DLS ++ + +ARLTL E Sbjct: 291 DLSPHMQGD-LARLTLGVE 308 >UniRef50_Q47BR5 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BR5_DECAR Length = 311 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 92/325 (28%), Positives = 140/325 (43%), Gaps = 41/325 (12%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G +LR ARE L +A L L V +E TF+RG++R+YARLV Sbjct: 21 MPVGEQLRLAREARDLEVADIARTLKLGPRQVEALECGDWHGLPGQTFIRGFVRNYARLV 80 Query: 73 HIPEEELL----PGLEKQA---PLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 + L+ LEK A ++ A+ A M + G R+ R LV ++ Sbjct: 81 QLDPAPLMLQLNQVLEKPADNLAMQEARPASMPNSGSGVSRRDRA------VVLVGAGLV 134 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 L+G ++ A+LS+ E QS+ L++ + T++ PAS Sbjct: 135 ALAGLVYFL---------------MPADLSALRESTQSL-LDSLARKEVPTSAPAPASEG 178 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 T+A P A Q V+ P + A +PAP++AT P A P+ Q V Sbjct: 179 TSAVPASEPVFPPGA-----TQQQVMYPQ--VLAPAESPAPSSAT-PQKAESSPS-QPAV 229 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 T AD + F + W+EV D K +FS ++GQ P L +G V+ Sbjct: 230 TA--ADQPQMRFIFDKESWIEVRDRDNKIIFSQRLGAGAEQVVSGQGPLSLTVGYAPGVR 287 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLN 330 + + G+ VDL + + VARL L Sbjct: 288 LFWHGQAVDLVPHTKGD-VARLVLE 311 >UniRef50_C8PVJ8 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVJ8_9GAMM Length = 302 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/334 (24%), Positives = 138/334 (41%), Gaps = 51/334 (15%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N+ HD + L G R + ARE+ GLS VA + + S +R +E + A TF Sbjct: 12 NSTPVHDTTQLL--GQRFKQAREKKGLSIDDVAAKTFILKSHLRALEANDFDALPQPTFA 69 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPL----RAAKV--APMQSFSLGKRRKKRDGWLMT 115 RG+ +Y R + + + + + Q P + A V APMQ R + + Sbjct: 70 RGFATTYGRFLGLDKNLVAQSFDAQYPATLKQKYATVINAPMQPMGTLNREARPSVRINP 129 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 F + +V+GL+ + + KA + + DQ+ A ++ + P Sbjct: 130 FVIGGILLVLGLAIFIFNKVSKAHNDSV----DQAPA---------------SAVASMPT 170 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 AS++ + T VTA P + ++ + D A + TAAT GA Sbjct: 171 QDQVSGASLNNAGSAIVTNTVTASGL---PATGSAITGVAVSADNA---SGTAATGQAGA 224 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 +A + V D + + DATG + G Q + G+ LTGQAP++ Sbjct: 225 ------KASIDIFVKDT----------TKITIVDATGNTILDGDQAR-GSYQLTGQAPFQ 267 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + I + V + +P+ LS + + N A TL Sbjct: 268 VNIDKASNVSLDLNKQPIKLSNYAQ-NDKANFTL 300 >UniRef50_Q0AE41 Putative uncharacterized protein n=2 Tax=Nitrosomonas RepID=Q0AE41_NITEC Length = 358 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 79/324 (24%), Positives = 125/324 (38%), Gaps = 47/324 (14%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G RLR+ R + G++ VA RL L + IE A+ FLRGY+R+YA L+ + Sbjct: 71 GQRLRDERIRRGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYVRNYANLLQLD 130 Query: 76 EE----ELLPGLEKQAPLRAAKVAPMQSFS-----LGKRRKKRDGWLMTFTWLVLFVVIG 126 + E +P + +K P Q F R R GWL L + V++ Sbjct: 131 DTTLLVEAVPQSRPADSVFTSK-NPSQRFKAIEPVYQSDRGGRSGWL-----LYVAVILA 184 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 A+ + + ++ M ++ + S S N D A +P ASV + Sbjct: 185 AFAAYGFYHEEIPEKMAPYMLNEGDQVIQSGSSSE-----NDQVAIDLALPLSPTASVSS 239 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 AP PA + + + P A PD Sbjct: 240 P---------MAP-PASASVNLPPAAAVLPALPAPSAPVADTAKAPDNGK---------- 279 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 +L F+ D W+++ D+ G+ + + + + G+ P L IG A V + Sbjct: 280 ------KSLHFVFSKDSWVKIKDSNGQIILEKINSRGTEQTIEGEPPLYLVIGNAAGVSL 333 Query: 307 QYQGKPVDLSRFIRTN-QVARLTL 329 Y G VDL+ + R N VAR +L Sbjct: 334 TYNGHKVDLAPYTRGNDDVARFSL 357 >UniRef50_C7RN39 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN39_9PROT Length = 292 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 124/311 (39%), Gaps = 61/311 (19%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 G++ A+ L L V +E + + +T +RG++R+YARL+ + +EL+ L+ Sbjct: 34 GMTVADAAQSLKLGPRQVEALEAEDWLSLPGNTMIRGFVRNYARLLSLDPDELMRELDAA 93 Query: 87 APLRAAKVAPMQSFSLGK--------RRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 R ++ S G RR +R +L L+L V+ GL A+++ Sbjct: 94 HLQRTVEL----DVSAGTTATLPPTVRRVERRDYLAISAGLILLVLAGL--AYYYVPADF 147 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 Q ++ T + S S V D V A Sbjct: 148 WQSQMATW-------IGSRSAPPAPVVPPVRAPAD----------------------VVA 178 Query: 199 PAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMN 258 P A + +P+ T + AP +P GA+P A L + Sbjct: 179 PKGAAGESVTVLTAPNA----TVLSEAP-GVRSPAGASP------------ATAGGLKLG 221 Query: 259 FTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318 F W EV D G+ +FSG+ ++ GQ P+ L +G V ++YQGK VDL+ Sbjct: 222 FAQPAWAEVRDGRGQIVFSGVSPAGSRRDVAGQPPFSLVLGNATQVSVEYQGKVVDLAPH 281 Query: 319 IRTNQVARLTL 329 I VARLT+ Sbjct: 282 I-NGDVARLTV 291 >UniRef50_C3X7I5 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X7I5_OXAFO Length = 329 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 140/339 (41%), Gaps = 48/339 (14%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N AT + EA GA L R G+S++ +A RL + V VR +E D A Sbjct: 27 NVAATTETTEAQKPGAILAARRVAAGISEEQIASRLKMSVRQVRSLEADDYEALHGMATA 86 Query: 62 RGYIRSYARLVHIPEEELLPGL-EKQAPLRAAKV---APMQSFSLGKR--RKKR--DGWL 113 RG++R+YAR++ I E L+ EK+ +A V P++ F + RKKR G + Sbjct: 87 RGFVRAYARILQIDPEPLVASFAEKKKASASASVQQGKPVEPFVKNREPFRKKRGNSGKI 146 Query: 114 MTFTWLVLFVVIGLSGA--WWWQDR-KAQQEEITTMADQSSAELSSNSEQGQSVPLNTST 170 +V+ V++ S + + D+ K + E T A + + +E ++VP Sbjct: 147 AILLIIVVGVLVVASNMNFFSFMDKFKKESAEKATPAVAPAPPVVPATETKETVP----P 202 Query: 171 TTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT 230 D AT PA D A NT A AP P A AP AAT Sbjct: 203 AADQATPENKPA--DQAAANTAGQTNQANAPVQTP---------------ATQSAPVAAT 245 Query: 231 TPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 P + LV+NF WL++ G + + + L Sbjct: 246 ---------------QAPAEKGSLLVINFREKSWLQIQKKDGAVIAEYIGKPGEKRQLEV 290 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 P + +G V ++++G PVDL TN VA++TL Sbjct: 291 TEPVTVIVGFAPGVNMEFKGAPVDLVSNT-TNSVAKVTL 328 >UniRef50_B8GTN5 Transcriptional regulator n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTN5_THISH Length = 325 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 44/78 (56%) Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 + LV+ F D W+E++DA G+ L G+ R+ L G PY++ +G V+I++ G Sbjct: 246 SVLVLRFAEDSWVEISDARGESLLVGLMREGTERRLEGVPPYRVFLGNAPGVRIEHDGSS 305 Query: 313 VDLSRFIRTNQVARLTLN 330 D +R RT+ AR TL Sbjct: 306 YDAARHARTDNTARFTLE 323 >UniRef50_C4GFD8 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GFD8_9NEIS Length = 280 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 123/322 (38%), Gaps = 59/322 (18%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 N+A G LR REQ LS V+ERL L + +E + F+RG++RSY Sbjct: 14 NKATELGILLRAKREQKQLSIGEVSERLKLPARQIEALENGDYNSLPEPVFVRGFLRSYG 73 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 R + + E L LE P + A SL + T+ + ++ V I G Sbjct: 74 RFLDLDESTLNDALENVVPSEKVRKAIQHDGSLNFANETPKRPFPTWIFGIIGVAIIGFG 133 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 + WQ + S E ++ ++ +S PL A+ Sbjct: 134 VYKWQTK-------------SQTEHANAKQEAESKPL--------------------IAS 160 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 T PA+ P N VV P A+ DT T T A+ P G A Sbjct: 161 ETAKPALDNP--------NVVVKPMTAS-DT-QTQTATPASAPAGVA------------- 197 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 LV+N L VT+A G+ L + + AP+++++G + + Sbjct: 198 ---GELVINARYRTMLTVTNAKGEVLINEIVPARSEHRFQNGAPFEVRLGYASGSTATFG 254 Query: 310 GKPVDLSRFIRTNQVARLTLNA 331 G+P+D++ + + A T A Sbjct: 255 GEPIDMNAARKNGKTATFTAGA 276 >UniRef50_C0EJV6 Putative uncharacterized protein n=4 Tax=Neisseria RepID=C0EJV6_NEIFL Length = 294 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 117/319 (36%), Gaps = 53/319 (16%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N + +D A T G LR R + Q VA RL L + +E+ + F+ Sbjct: 4 NDKINYDTQAAKTLGDELRKHRTDAKIDIQDVASRLKLSTEQIDALEKGEYSGFPGLVFV 63 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAP-LRAAKVAPMQSFSLG-----KRRKKRDGWLMT 115 GY+RSYAR + I E+ + L P L A +S + G ++ W++ Sbjct: 64 SGYLRSYARFLKIDEQTIAKHLLSITPQLEDHVYAVTRSANTGLSYTDTEKQGFPKWILG 123 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 L L V G ++WQ + S+ E Q+ N+ D Sbjct: 124 IAALALAV----GGVYFWQSK-------------------SSFENEQANIQNSKDVAD-- 158 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 T TP D A + T D ++ P AN D AA+ A A A Sbjct: 159 TMKTPALKTDNVAVSEMTE---------DGKKEITNKPEVAN-DQAASEASAVAQEEKPA 208 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + D+ L + L +TD GK +FS + L G APY Sbjct: 209 VKVEKDE------------LWIKVQYRSNLIITDKDGKVVFSRIVPAGSEQRLRGGAPYN 256 Query: 296 LKIGAPAAVQIQYQGKPVD 314 + IG A + Y G P++ Sbjct: 257 VWIGIAAGSEANYGGTPIE 275 >UniRef50_C4KCN7 Transcriptional regulator n=1 Tax=Thauera sp. MZ1T RepID=C4KCN7_THASP Length = 322 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 79/309 (25%), Positives = 124/309 (40%), Gaps = 21/309 (6%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 G S A + L + +E D A F+RG+ R+YAR + + LL G+E Sbjct: 28 GESVHEAAFAIKLSPRQIEALENDDFAALPGMAFVRGFARNYARYLGLDATPLLDGIEHL 87 Query: 87 APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTM 146 A ++P+++ + G G +F V+ ++ + W + E + + Sbjct: 88 AGAGQPDLSPIRN-ADGDLPAGGGGRRGSFPAGVVVALLLVLLGVGWYFDWFRTEPLPGL 146 Query: 147 ADQSS---AELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAV 203 Q+ A + + +E G + P + PA + + AV A P V Sbjct: 147 ELQTEPAPAFMPAPTEGGGAAPATSEPVATPAPLEASAPAAPHASPVAIPAAVGAGVP-V 205 Query: 204 DPQQNAVVSPSQANVDTAATP---APTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFT 260 P + A+ +P +P A TP V A N L F Sbjct: 206 TPLAAPASATPPASASAIVSPVVQSPAQAATP------------VAEEGAGGNRLSFRFG 253 Query: 261 ADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIR 320 D W+EV DA+G L SG R + + G P++L +G A V ++ GK VDL+ R Sbjct: 254 GDSWIEVRDASGTILHSGTNRAGSSRVVQGTPPFRLVVGNSANVVLEQDGKAVDLAAHTR 313 Query: 321 TNQVARLTL 329 VARLTL Sbjct: 314 -GSVARLTL 321 >UniRef50_A9KFU7 Integral membrane protein n=6 Tax=Coxiella burnetii RepID=A9KFU7_COXBN Length = 263 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 11/180 (6%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 A T G LR AR+ L Q VA+ + L + V+D+E+D A ++RGY+R YAR Sbjct: 72 AKTPGILLREARQAKNLQQSDVAKEIRLSIQWVKDLEQDDYSHVPALIYVRGYLRGYARY 131 Query: 72 VHIPEEELLP-----GLEKQAPLRAAKVA-PMQSFS---LGKRRKKRDGWLMTFTWLVLF 122 V I +E++ GLE++ A+V P++ + + + ++ +G ++ + ++L Sbjct: 132 VGISPDEVMAAFDEMGLEEEFERVKAEVERPVKHHAVPVVLRSKRMINGKMVRWVTVILL 191 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 V + +S WWQ +K ++ ++ L SV NT+ T + T P A Sbjct: 192 VALIVSVGVWWQGKKHILGQLQSVISSPQENLPLKQTSVNSV--NTNKTINTNLTEQPTA 249 >UniRef50_B5WST2 Transcriptional regulator, XRE family n=4 Tax=Burkholderia RepID=B5WST2_9BURK Length = 381 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 136/360 (37%), Gaps = 65/360 (18%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH- 73 GARL RE G + + V+ RL + V + +E +TF G +RSYA+++ Sbjct: 41 VGARLTQLRESKGWAIEDVSARLKVSVVKLSALEAGDISHLPDTTFALGVVRSYAKMLGA 100 Query: 74 --------IPEEELLPGLEKQAPLRAAKVAPMQ--SFSLGKRRKKRDGWL-------MTF 116 + E+ +P P + K P S SLG K WL + Sbjct: 101 DPAPFTAALRREKGVPAPNLSMPASSGKDLPRGKVSLSLGDSGHKSRSWLWGVAAIIVAV 160 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 L ++ G + W KA T+ +S ++ QG TT +P+ Sbjct: 161 IALSMWRTNGGDSSAWLARLKASANSSTSSDTAASGAVA----QGP-------TTPEPSG 209 Query: 177 TSTP------------PASVDTTATNTQTPAVTAPAPAVDPQQNAVV------------- 211 S P + +AT T P T AP P N Sbjct: 210 ASAPEVAATADNAANTDNAASASATPTPAPLATGTAPGSAPAANTAATPAATPAAAPKAG 269 Query: 212 SPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDAT 271 S ++A DTA+ AP A P + V + + T D W V D Sbjct: 270 SQARAQADTASASAPVVVANASAPAVTPEPREAV---------VALRVTQDSWFSVRDKN 320 Query: 272 GKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRF-IRTNQVARLTL 329 GK++FSG+ +TG AP+K+ +G A ++ + G+PVD S++ VAR L Sbjct: 321 GKEVFSGLVHAGDPKEVTGVAPFKVTVGNKAGLEAVTLDGQPVDPSKYSAAKGNVARFAL 380 >UniRef50_C8NBB0 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBB0_9GAMM Length = 311 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/329 (22%), Positives = 133/329 (40%), Gaps = 41/329 (12%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 AL GA L AR + LS A + L + +E+++ A F RGY+ YAR Sbjct: 10 ALDIGAVLSAARMKRDLSIATAAMQSNLSQEIIERLEQNRFAEIGAPVFTRGYLGLYARF 69 Query: 72 VHIPEEELLPGLEK----QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 + + E + K AP A ++S + RR+ G +WL+L V+ + Sbjct: 70 LGLNEAAVSQAFNKIKSEPAPELRLTAANIESQARPYRRRSYLG-----SWLLLIPVVAI 124 Query: 128 SGAWWWQDRKAQQEEITTM-----ADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 G +Q +T + A Q+S E ++ +E G + N T +P Sbjct: 125 GGILLYQLFDNNSWLMTQINGAFNAPQASGE-TTPAEGGSANSGNEIVLEVGGTPLSPEG 183 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + + + P +T P P ++ + S+ +T A+ P A+T G Sbjct: 184 TPLSPESAQNIPGLTPP-----PASDSSATNSEQGAETPASDTPPASTANRG-------- 230 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ-APYKLKIGAP 301 + ++F+ + W+E+ D+ KK+ S + + + L APY L +G P Sbjct: 231 ------------IQLSFSVESWIEIKDSGNKKVLSKLVKAGEKIELPADGAPYNLNLGRP 278 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V + G+ L + + N R ++ Sbjct: 279 DGVVMLINGQEQPLENYRQKNSGRRFNVD 307 >UniRef50_C6WV26 Putative uncharacterized protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV26_METML Length = 357 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 86/343 (25%), Positives = 135/343 (39%), Gaps = 32/343 (9%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + GA L+ AR+ LSQQ V++ L V V +E D + RG+IR+YARL+ Sbjct: 19 SLGAVLQAARDAKKLSQQDVSDSLRYSVKQVDALERDAFDLLPDAMITRGFIRNYARLLE 78 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQ-SFSLGKRRKKRDGWLMTF--TWLVLFVVIGLSGA 130 I LL + +P+++ + + S + K WL + LVLF ++ A Sbjct: 79 IDAAPLLDIYRQLSPVQSPSLLAVNPSMQPVQLTKDNTPWLTYILGSILVLFFLL----A 134 Query: 131 WW-WQDRKAQQEEI--------TTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 W+ + + Q +I + A+ S +E A P Sbjct: 135 WFVYIEYLPHQAKIADEAAPQVAAPVAEQPADTQSATEVTLPEAALPEAALPAAERQFPE 194 Query: 182 ASVDTTATNTQTPAVTAPAPA------VDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 +V T AV PA V P A S ++V +PAP A P Sbjct: 195 DAVQGQDTGLANGAVANAQPATPVIAPVQPATAATPSAQVSSVQVPVSPAPVKAEAPAKV 254 Query: 236 AP--LPTDQAGVTTPV-------ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 P +A V A + M T W+ V+D G+ L+ Sbjct: 255 ESQIKPESKANPELKVKPELQTSAGLKKVGMTATEKSWVRVSDKAGQILYEATLNAGDTQ 314 Query: 287 NLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +L+ Q P+ + IG A + G+ +DL+ + R N VAR++L Sbjct: 315 SLSFQTPFNVVIGNAKATAVNVSGQAMDLAGYTRNN-VARISL 356 >UniRef50_C6N7L3 DNA-binding protein, putative n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7L3_9GAMM Length = 192 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M+T T D N A+ GA+L + REQ G S + +A +L L+ + IE+++ + Sbjct: 1 MSTTTTLDDNTIVHAINPGAQLASIREQKGYSVEFIANKLHLRTRVIELIEKNEFQSLPG 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQ-----APLRAAKVAPMQSFSLGKRRKKRDGW 112 + F++GY+R+YA+++ + E L ++Q P RA + KR + + Sbjct: 61 TVFIKGYLRAYAKILDVSPEPYLAVFDEQYVTEKKPERAL-------WQQSKRESNKAEY 113 Query: 113 LMT-FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNS 158 ++ FT L V+ G WW +++ +QQ+ + + + ++ NS Sbjct: 114 VIRWFTILFALGVVVAVGIWWQKNQDSQQQLFSEKSAPTDLSMNQNS 160 >UniRef50_Q0A987 Transcriptional regulator, XRE family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A987_ALHEH Length = 325 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 LV++ + WLEV D G++L G + + L G+ P+ L IG AV++++QG V Sbjct: 250 GLVLHISGTTWLEVRDEDGERLMVGNYQGEETHQLQGEGPFALVIGNADAVRVEFQGDAV 309 Query: 314 DLSRFIRTNQVARLTL 329 DL+ R N VARLT+ Sbjct: 310 DLAPHTRGN-VARLTI 324 >UniRef50_A5EVN3 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVN3_DICNV Length = 326 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 35/319 (10%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G LR ARE+ S A++ L + ++ +E + A F RGY+ SYAR + Sbjct: 14 TIGDALRAAREEKQWSITEAADQTNLNPTIIQLLEANDFKNIGAFVFTRGYLNSYARALG 73 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + +E++ + P + + + R KR+ WL + ++ ++ A Sbjct: 74 LNADEIVQLFNRLYPDTSQPRISSANAASQTRSFKRNN---IAAWLTILPILIVAAALAV 130 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT----TAT 189 Q IT Q A + N++ T PAT + T TA Sbjct: 131 QIMNPNSWLIT----QFKATFAPNAK------------TAPATGENLVVQIGTEPPETAA 174 Query: 190 NTQTPAVTAP------APAVDPQQN-AVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 NT P P PA P++N A+++P+ T +PA ++A P+ L + Sbjct: 175 NTALPPPELPELTSLETPAPQPEENTALINPTTPETTTTESPAESSA--PEQNNALAPEN 232 Query: 243 AGVTTPVADPNA---LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 A P A +A + + T + W+EV D+ K L+S + ++ L+ Y + +G Sbjct: 233 ASTAQPTATADASKTIRIEITGENWVEVRDSNRKILYSKTFKSGESIELSDGQTYTVSLG 292 Query: 300 APAAVQIQYQGKPVDLSRF 318 P + + G+P D ++ Sbjct: 293 RPQSANLMIAGQPADWQKY 311 >UniRef50_Q2Y6F4 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6F4_NITMU Length = 448 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 5/130 (3%) Query: 205 PQQNAVVSPSQANVDTAATPAPTAATT-PDGAA--PLPTDQAGVTTPVADPNALVMNFTA 261 P ++AV S V A P+ AAT+ P +A P P A P + + F Sbjct: 320 PSESAVTS-KPPQVAVAPKPSEGAATSKPSESAVTPKPPQVAATPKPPPAKAGIRLTFAG 378 Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIR- 320 + W++V D GK L S + L G+ PY L IG P V++ Y KPVDLS F + Sbjct: 379 ESWVQVKDGNGKLLLSRVNPPGSEQVLRGKPPYSLMIGNPGQVKLVYNSKPVDLSIFAKL 438 Query: 321 TNQVARLTLN 330 +A L L Sbjct: 439 PGGMAHLVLQ 448 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 24/188 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR AR + GL + VA +L V +EED+ FLRG++R+YA+L+ + Sbjct: 22 VGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYDKLAGGPFLRGFVRNYAKLLQL 81 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQS----FSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 E LL LE+ P V S F G+ KR+ + ++ + L A Sbjct: 82 DEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKRN---VVLGGGIVLAITLLGYA 138 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + D+ ++A+Q + S + GQ T + P + PPA V Sbjct: 139 IYSGDK-------ASVANQPDMAMESEKDTGQ------PTLSFPFPSQAPPAEV----PE 181 Query: 191 TQTPAVTA 198 +Q PA +A Sbjct: 182 SQAPAPSA 189 >UniRef50_D1RE75 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RE75_LEGLO Length = 194 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT T D+N GA L + REQ G + + VA +L L+ + IE ++ Sbjct: 1 MNTITTLDENILENDRNPGAHLASIREQKGYTIEYVANKLHLRARIIELIENNEFHLLPE 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK--KRDGWLMT 115 F++GY+R+YA+L+ E L KQ + P ++ +R+ K + + Sbjct: 61 PVFVKGYLRAYAKLLGTSPEPYLAIFNKQY---LVERKPERALWQQSKRESHKAEHIIRW 117 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQ 140 FT L VI G WW ++R QQ Sbjct: 118 FTLLFALGVIVAVGIWWQKNRDNQQ 142 >UniRef50_B1XXL4 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXL4_LEPCP Length = 299 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 ++V+ +AD W+E D G L S M + L G P +LKIG ++ ++G+P Sbjct: 223 GSVVLRTSADSWIEARDGAGALLMSRMLPAGEVVGLDGSLPIRLKIGNADGTRLHFRGQP 282 Query: 313 VDLSRFIRTNQVARLTLN 330 +DL+ R N VARL L Sbjct: 283 IDLNPHTRDN-VARLELK 299 >UniRef50_A5WGQ2 Uncharacterized protein-like protein n=3 Tax=Psychrobacter RepID=A5WGQ2_PSYWF Length = 281 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 4/124 (3%) Query: 200 APAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNF 259 A AV+ NA+V + +A TA + G + L + V + D N L + Sbjct: 155 ATAVETDDNALVDDLSDSEQSAGAAINTAVVS--GGSALDNTGSAVASNTTDAN-LDLTV 211 Query: 260 TADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFI 319 +A+ L V DATG L SG Q G+ L G+AP+K++I + V + G+P++L+ F Sbjct: 212 SANTQLNVVDATGNTLLSGNQSA-GSYKLAGKAPFKIQIDQVSNVALNLNGQPIELNDFA 270 Query: 320 RTNQ 323 + N+ Sbjct: 271 QDNK 274 Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 27/214 (12%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 T +QN + G RL+ AR LS VA L + + IE + + + F RG++ Sbjct: 15 TSNQNVG-SFGNRLKQARINKNLSIDDVAAELFILNRHLEAIEAEDFRSLPQAAFARGFV 73 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAK---------VAPMQSFSLGKRRKKRDGWLMTF 116 +YA+ + + ++++ + P K + PM + RR R L+ Sbjct: 74 INYAKFLGLDPDQIVDSFNRNYPDELKKKSVDDIESPLKPMGTLQREGRRSIRINPLLVL 133 Query: 117 --TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS----- 169 L++ V + QD A + + + D S+SEQ +NT+ Sbjct: 134 GVIGLIVLAVFLIRTVSNAQDATAVETDDNALVDD-----LSDSEQSAGAAINTAVVSGG 188 Query: 170 ----TTTDPATTSTPPASVD-TTATNTQTPAVTA 198 T ++T A++D T + NTQ V A Sbjct: 189 SALDNTGSAVASNTTDANLDLTVSANTQLNVVDA 222 >UniRef50_A4JEP1 Transcriptional regulator, XRE family n=6 Tax=Burkholderia RepID=A4JEP1_BURVG Length = 337 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRF-- 318 DCW V D GK+LFS + R + G P+K+ IG A + + + GKPVD +++ Sbjct: 267 DCWFSVRDKNGKELFSALVRAGETKQVAGDGPFKVTIGNKAGLDAVAFDGKPVDPAKYSA 326 Query: 319 IRTNQVARLTL 329 R N VAR TL Sbjct: 327 ARGN-VARFTL 336 >UniRef50_Q21KT4 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KT4_SACD2 Length = 331 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 40/63 (63%) Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 + LV+ FT DCW+E+ +A+GK +F+ +Q L L QAP+++ +G AV ++ + Sbjct: 254 DELVLTFTDDCWVEIKNASGKIIFAAVQTPADTLTLADQAPFEIMLGNARAVAVKMNDRE 313 Query: 313 VDL 315 +++ Sbjct: 314 IEV 316 >UniRef50_C7I047 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I047_THIIN Length = 308 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 133/329 (40%), Gaps = 50/329 (15%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI- 74 GA LR AR G + + +A +L + + + +E A TF R +RS + + I Sbjct: 16 GAALREARMGAGRNVEELAAQLKVAPAKIAALEAGDWSALPDDTFGRALLRSCCKALKID 75 Query: 75 --PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKR------DGWLMTF--TWLVLFVV 124 P +LLPG AP+ + V + L R +R G ++ WL + +V Sbjct: 76 AKPLLDLLPG----APVLHSPVPDEEGAELAARVPERPLPRAAGGARKSYGLLWLAVLIV 131 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 + ++W + E + SA S QG S PA+ Sbjct: 132 ALAAVVYFWPALRGLTEGL-----MPSAAKPQESAQGT-------------VESVLPAAS 173 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 T+ PA PA P NA SP + + PA TA + P AP+ + Sbjct: 174 HPTSHAASHPASH---PASHPA-NAGSSP----LPLQSRPA-TAGSAPVPVAPVASAATS 224 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL---TGQAPYKLKIGAP 301 + N L + +A W++VT + GK +FS + + ++ G P + +G Sbjct: 225 AASG----NVLQLAASAPSWVQVTASNGKVIFSQLMQPGAPQSIQVPAGSTPLAIVVGNA 280 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + Y GKPVDL+ R N VAR TL Sbjct: 281 PHTAVSYAGKPVDLTPDTRAN-VARFTLK 308 >UniRef50_B4SSW5 Transcriptional regulator, XRE family n=20 Tax=Xanthomonadaceae RepID=B4SSW5_STRM5 Length = 289 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 41/69 (59%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 A G RLR ARE GL+ + V RL + + VR +EE++ A F+RG +RSYARL Sbjct: 13 AAGCGTRLRQAREAAGLTLEDVGSRLRMPIQVVRSLEEEQWQKLGAPVFVRGQLRSYARL 72 Query: 72 VHIPEEELL 80 + + +LL Sbjct: 73 LDVDVGQLL 81 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 N L M F D W+++ G + + + + + T ++ +G +AVQ+Q G Sbjct: 203 NTLDMQFNGDSWVDIGGPDGTSVEKALIKSGESRSFTPGQVARVTLGNASAVQVQQNGAI 262 Query: 313 VDLSRFIRTNQVARLTLNAEQS 334 VDL+ + R N VAR +++E S Sbjct: 263 VDLTPYQRAN-VARFQVSSEGS 283 >UniRef50_A7C763 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C763_9GAMM Length = 139 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 9/112 (8%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 L+ G L AREQ +S + +A+RL L V + +E D + F+RGY+R+YA+L+ Sbjct: 30 LSPGMILHQAREQQKMSVKHIADRLYLDVHVIEALEADDYETLPPTIFVRGYLRNYAKLL 89 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD-----GWL-MTFTW 118 +P + ++ +K L+ + P+ L + K+ W+ + F+W Sbjct: 90 EVPIKSIMVSFDK---LQQPREVPVLHHHLNLKNKQVAEIYCLHWVPLLFSW 138 >UniRef50_Q0VND9 Putative uncharacterized protein n=2 Tax=Alcanivorax RepID=Q0VND9_ALCBS Length = 301 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV-QIQYQGKPV 313 L ++FT++CW++VTDA G+ L G Q +L L G+AP+ L +G AV ++ GK V Sbjct: 226 LSLSFTSNCWIKVTDANGRTLRQGEQSGGASLMLDGKAPFNLTLGNAGAVDELLVNGKAV 285 Query: 314 DL 315 L Sbjct: 286 TL 287 >UniRef50_C8QXV7 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXV7_9DELT Length = 325 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 137/347 (39%), Gaps = 55/347 (15%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 A E L G +LR AR G+S + A + ST+R +EE+ A ASTF RG+ Sbjct: 11 AEEQMEEGLALGEKLRRARTAKGISLEEAAGATRIHTSTLRALEENNRAALPASTFTRGF 70 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAP---MQSFSLGKRRKK--RDGWLMTFTWL 119 +R YA + + +E L K++ L A + G+R + R F W+ Sbjct: 71 VRIYANHLGLDQEAALRQHIKESGLPEAATTEKVNIHEILAGERMAEPLRALSGSRFFWV 130 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 + +V L+ W + +A ++ L S +Q Q P T + Sbjct: 131 MALLVAVLAVYWGYNSY------FRPIAQPTAFPLESVFDQAQ-----------PEATPS 173 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT---------PAPTAA- 229 PA+ T +T PA P+Q AV + T PAP A Sbjct: 174 SPATQATASTPEPLPA--------PPEQPAVATQPPPAAPAPLTAARPPADRQPAPAGAE 225 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNA---LVMNFTADCW--LEVTDATGKKLF--SGMQRK 282 +TP AP QA V + A+ A L F D W L++ ++LF G R Sbjct: 226 STPQPEAPA-LSQAPVPSHPANAEASHVLEARFVEDTWVRLQIDQEPARQLFFQPGESRT 284 Query: 283 DGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + +L+IG V++ Y G+P L R+ QV L+ Sbjct: 285 WKAVEQ-----LELRIGNAGGVELSYNGEP--LPPLGRSGQVTDLSF 324 >UniRef50_C5CXG5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXG5_VARPS Length = 322 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 38/76 (50%) Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 LV +CW+ VT+A GK+L + + L+G P + +G +AV +Q GKP D Sbjct: 246 LVFVAREECWITVTEAGGKQLLRRSLQAGETVALSGTLPLSVVVGRASAVDVQVHGKPYD 305 Query: 315 LSRFIRTNQVARLTLN 330 L R VAR + Sbjct: 306 LKPVTRGGGVARFEVK 321 >UniRef50_Q5ZV95 DNA-binding protein, putative n=4 Tax=Legionella pneumophila RepID=Q5ZV95_LEGPH Length = 189 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 8/144 (5%) Query: 1 MNTEATHDQ---NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT A D+ NE G L R+Q G S + VA +L L+ + IE Sbjct: 1 MNTIAAMDETRNNEFTNPGYELAALRQQKGYSIEYVASKLHLRARIIELIEAGDFDLLPQ 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPL--RAAKVAPMQSFSLGKRRKKRDGWLMT 115 F++GY+R+Y++L+ + E L Q + + A QS K K + ++ Sbjct: 61 PVFVKGYLRAYSKLLGVSPEPFLTLFNAQYCFEKKPERAALWQS---KKESHKAEHFIKW 117 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQ 139 FT L V+ G WW +++ +Q Sbjct: 118 FTILFAIGVLVAVGIWWQKNKDSQ 141 >UniRef50_Q9PG41 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PG41_XYLFA Length = 211 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 14/160 (8%) Query: 7 HDQN-----EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 HD N A G RLR+AR +GL+ + VA L + + VR +EE+ A F+ Sbjct: 12 HDSNPDPFEHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEENWQRLGAPVFV 71 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RG +R YAR ++I +L P LE+ + ++ P + S ++ R L + T + Sbjct: 72 RGQLRGYARFLNI---DLDPLLEQAF---STEIEPAELVSYAHMQRGRR-LLESVTRKAM 124 Query: 122 FVVIG--LSGAWWWQDRKAQQEEITTMADQSSAELSSNSE 159 +VVI L+ W+ R + + + A S SE Sbjct: 125 YVVITGVLAVPVWYAMRSSFEPRVPRTASLEVVPEQSKSE 164 >UniRef50_C5TVA8 XRE family transcriptional regulator n=3 Tax=Desulfovibrio vulgaris RepID=C5TVA8_DESVU Length = 313 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 37/327 (11%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR RE G S VA RL + +R IE+ + + RG+I++YA ++ I Sbjct: 7 GLMLREEREARGFSLDLVATRLKVSARILRAIEQGDVDDLPHAVYARGFIKAYASMLGIT 66 Query: 76 EEELLPGLEKQAPLRAAK--------VAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 + ++ P + V P+ R +R G L+T V GL Sbjct: 67 PGIVAEVVDSVYPCEIQEDLVENPGVVEPVSG------RGRRAGVLLTLG----LVACGL 116 Query: 128 SGA-WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 A +W+ +K+ +E++ + +A + Q Q VP ++T + S PP +VD Sbjct: 117 MFAGYWYYKQKSAREQMPAVT--GTAPFVEPAPQ-QVVPAPPTSTEE----SVPP-TVDG 168 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANV---DTAATPAPTAATTPDGAAPLPTDQA 243 A V P+Q S + ++ +P P + P D A Sbjct: 169 AVPAVPAAGAADGAKPVAPEQPVTASNASSSAMADKLLGSPTPEQKAK-EVLVPQQGDDA 227 Query: 244 GVTTPVADPNALVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 G P A + +++ A+CW+ T D + FS RK LT LK+G Sbjct: 228 GALPP-AGKHRIIVTAVAECWVHSTADNADVRQFS--LRKGETFALTFSRSLSLKLGNAG 284 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTL 329 V +++ GK D+ QV LT Sbjct: 285 GVNVRFDGK--DMGAPGEPGQVKTLTF 309 >UniRef50_C6BV70 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BV70_DESAD Length = 292 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 126/327 (38%), Gaps = 50/327 (15%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G+RL++ R++ GL+ + + E + + IE + +G+I++YA+ + + Sbjct: 7 GSRLKDERKRQGLTMEQIMEITKVSRVNITAIESGNQKEFPHEVYAKGFIKTYAKALGLD 66 Query: 76 EEE--------LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 EE + G + A V P S KK + L+ VV GL Sbjct: 67 AEEIGDEFSRIMGSGTTESADDVVETVQPDYS----ADTKKSPVGTIILILLLAGVVGGL 122 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 ++ D ++ S+ +E + + PAT V+ Sbjct: 123 --VYYLHD---------------NSFFSAKNEAQTEIVAEEAVQEKPATEP----QVEAP 161 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 A + + V PAPA Q A +P + ++ A P AA ++ V Sbjct: 162 AVDEKKAEVVEPAPAEVEQSAATEAPVETKIEEQAVEQPVAA-----------EENIVAE 210 Query: 248 PVADPNALVMNFTADCWLE-VTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 PV + A+ CWLE V D + K+ +Q + L+L + KLK+G V+I Sbjct: 211 PVGNTVAITAKPGEACWLEAVVDGSAKEYV--LQEGE-TLSLPFEDSLKLKLGNGGGVEI 267 Query: 307 QYQGKPVDLSRFIRTNQVARLTLNAEQ 333 GKP QV +L +A Q Sbjct: 268 ASNGKPYSFDA--PKGQVKKLEFSAVQ 292 >UniRef50_Q6MGU1 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGU1_BDEBA Length = 374 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 TG L+ ARE+ GLS + L + ++ IEE A TFLRG+++SYA +H+ Sbjct: 4 TGELLKKAREEKGLSLHEIGLSLKISSKVLKAIEEGDETQLPAKTFLRGFVQSYANFLHL 63 Query: 75 PEEELL 80 +++L Sbjct: 64 NSDQVL 69 >UniRef50_C6IW30 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IW30_9BACL Length = 347 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 103/278 (37%), Gaps = 38/278 (13%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G +LR AR GLS V E ++ + IE S ++R +I++YA V + Sbjct: 5 GQQLREARLARGLSLDDVQEMTKIRKRYLEAIEMGDYKVLPGSFYVRAFIKTYAETVGLD 64 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG-----WLMT-----FTWLVLFVVI 125 +ELL + P A + P + KRR ++ WL T F L+L V+ Sbjct: 65 ADELLAEHRQNVPSTAPE--PTMEPVIQKRRSRQHNERNSKWLSTTLMWSFAVLILIVIY 122 Query: 126 GLSGAWWWQDRKAQQEEI-----TTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 W + +A + T + + N+ G +V N + T Sbjct: 123 LYFSVWGNNNDQADGNKEPDPTPVTQGTSQNGNQTGNATGGDAVGGNNG-VENGTNNGTE 181 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P T TNT T SP T T T PDGA T Sbjct: 182 PGINQGTDTNTGNAGNTGDE-----------SP------TNDTGNQTVTIVPDGAEG-ST 223 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEV--TDATGKKLF 276 + + P P +V+ + W+EV ++ G+KLF Sbjct: 224 TKFKIQNPGTGPVQVVITASGKSWVEVRKGNSKGEKLF 261 >UniRef50_Q2LVM8 Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVM8_SYNAS Length = 300 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 128/339 (37%), Gaps = 56/339 (16%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + D + T G+ L+ ARE GLS + V E+ + VS + IE D+ + R + Sbjct: 3 SEQDNEDLKTLGSGLKTARESKGLSLKDVNEKTRISVSILDAIENDRFHLLPPGVYTRNF 62 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 IR+YA + + +ELL K+ A V + +R W + V ++ Sbjct: 63 IRTYADFLGVDSQELLDHFTKEREQTAPPVLQKDDADISAVNHRR-YWKVFAIGAVALIL 121 Query: 125 IG-----LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 IG L+ W+ A I++ + +++G + D A S Sbjct: 122 IGVLVWSLNSCWY-----AGNSAISSF-------IGEKNDEGPIPQVKLPNRDDGAVNSD 169 Query: 180 P----PASVDTTATNTQTPAVTAPAPAVDPQQNAV--VSPSQANVDTAATPAPTAATTPD 233 PA+ T + P + P V+ QQ+ V V P +A+ PD Sbjct: 170 KGLFIPAASSRTLPDALRPEIARP---VNLQQSTVQDVYPR------------ISASIPD 214 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEV---TDATGKKLFSGMQRKDGNLNLTG 290 + LV+ WL++ A + + + +R +N T Sbjct: 215 SEQKAEENSGRYQ--------LVIEAKERTWLQIRADDGAASQVILNPGER----INRTA 262 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 + + L IG A V + +QG+ L + QVA L L Sbjct: 263 REHFILDIGNAAGVSVSFQGRK--LENLGKRGQVAHLRL 299 >UniRef50_C7LQ79 Transcriptional regulator, XRE family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQ79_DESBD Length = 314 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 27/311 (8%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G LR REQ GL+ +AV E+ + S + +EE + + + RG++RSYA L+ Sbjct: 4 IEIGTALREGREQKGLTVEAVEEKTKIAPSVIIALEEGNSARFPHAVYARGFVRSYAMLL 63 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 + +EL ++ P+ P + G ++ +V + I + GA Sbjct: 64 GLDAQELCAHFSREYPVPKDTDQPDSHAPQIHVKMHDSGNVVVTVRIVAILGILILGALG 123 Query: 133 W----QDRKAQQEEITTMADQSS-----AELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 W R E + +Q++ AE+ + S+P + + A T + Sbjct: 124 WYVFDHYRSRASEAPAPVGEQTAPPAPPAEVLPSG----SLPAPLTQMQEVAATPAEQPA 179 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + TA+N A+ A A V P Q D A P P A P AA T Sbjct: 180 ANMTASNASEEALNATA-GVSSFAATEAVPGQ---DPVAAPEPVVAAEP--AAQTET--- 230 Query: 244 GVTTPVADPNALVMNFTAD--CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 VT A M A WL+ ++ RK +T +K G Sbjct: 231 -VTASAASAGERTMRIVAHSASWLQAR--PDDRILDYFLRKGETTTITFSESLSIKFGNA 287 Query: 302 AAVQIQYQGKP 312 V+++ G+P Sbjct: 288 GGVKLELDGQP 298 >UniRef50_A5FX96 Uncharacterized protein-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FX96_ACICJ Length = 436 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 6/142 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + GA LR RE+LG +A RL ++ + IE A A T+ G+IRSYA + Sbjct: 27 SVGAELRAVRERLGWKLPDIAARLKIRRVFLEAIEAGNLAALPAPTYAAGFIRSYAEAMG 86 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + EE+L + R P Q L + D + L + VIG++G + W Sbjct: 87 LDPEEILRRFRAEGMTR-----PRQP-DLAFPQPVPDRAVPPGAVLFVVAVIGIAGYFLW 140 Query: 134 QDRKAQQEEITTMADQSSAELS 155 + ++ M A+L+ Sbjct: 141 YRHSEHELKMARMVPAVPAKLA 162 >UniRef50_A8TN86 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN86_9PROT Length = 442 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 39/245 (15%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 ++ + G LR ARE GL VA L ++ + + +EE + A T+ GY+R+YA Sbjct: 3 SQPIPVGDELRRAREAAGLEISDVAAHLRIRSNFLAALEEGRPDALPGVTYAIGYVRTYA 62 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK------KRDGWL--MTFTWLVL 121 + GL+ + +R K ++ L R + +G + M + L Sbjct: 63 GFL---------GLDPETSVRRFK---EEAAGLNSRTELVFPSPAPEGRVPGMAVMLVAL 110 Query: 122 FVVIGLSGAWWW-QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + G G W+W +R ++ + + A+L + S+P + S T A S Sbjct: 111 LLAGGAYGGWYWVSERDGGLHDLVPLVPERLAQLIEG--EAPSLPTSASKPTSGAIGSAT 168 Query: 181 PAS-----VDTTATNTQTPAV-----------TAPAPAVDPQQNAVVSPSQANVDTAATP 224 P S D T PA +AP P+ PQ + + S TP Sbjct: 169 PRSTAGTYADANPTGVALPATGSTDTKLSASPSAPQPSGVPQASTLASAPVITKPAEPTP 228 Query: 225 APTAA 229 AP+AA Sbjct: 229 APSAA 233 >UniRef50_Q3A2Z7 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2Z7_PELCD Length = 311 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G +L+ RE +GLS QAVAER ++ + +R E+D A A+ + G++R YA L+ Sbjct: 17 SLGKQLQERREAMGLSLQAVAERTRIRSAYLRSFEDDDYEALPAAAYAVGFLRQYATLLG 76 Query: 74 IPEEELLPGLEKQA-----PLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + E+ L A PL L KKR G+ + WL++ + L Sbjct: 77 LDAEQALKEFRGAAQSVAQPLSQLPTPENSGTELEPAGKKRPGFPI---WLLIALGAILV 133 Query: 129 GAW 131 W Sbjct: 134 AGW 136 >UniRef50_Q13X27 Transcriptional regulator, XRE family n=26 Tax=Burkholderia RepID=Q13X27_BURXL Length = 370 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPV 313 + + T D W V GK++FSG+ +TG AP+++ +G A ++ + G+PV Sbjct: 293 VALRVTQDSWFSVRGQDGKEVFSGLVHAGDTKEVTGVAPFRITVGNKAGLESLTLDGQPV 352 Query: 314 DLSRFIRT-NQVARLTL 329 D S++ VAR L Sbjct: 353 DPSKYAAAKGNVARFAL 369 >UniRef50_B4AQD4 Helix-turn-helix domain protein n=18 Tax=Francisella RepID=B4AQD4_FRANO Length = 226 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 33/229 (14%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEE---DKAPADLASTFLRGYIRSYARLVHIP 75 L++ R+ L ++ +A+ + L V T++ IEE DK + +S+ L+ IR Y + IP Sbjct: 8 LKSVRDSRELKRETIADAINLSVETIQLIEEADNDKLLLN-SSSVLKNQIRRYCEYLEIP 66 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 E++++ L K + +K R G L F ++ ++ ++ Sbjct: 67 EKKIVSILNK--------------IDILYYKKSRYGKLKFFDYINRLAILVIAVILIVLV 112 Query: 136 RKAQQEEITTMA-DQSSAELS--------SNSEQGQS-VPLNTSTTTDPATTSTPPASVD 185 K +E + T+ + S A + +NSEQ QS V NT+ T ++ + +D Sbjct: 113 TKHIRENVDTVTPENSKANIIYTPINYDINNSEQYQSTVSSNTNNTKTTDDINSTASHID 172 Query: 186 TTATNTQTPAVTAPAPAVD-----PQQNAVVSPSQANVDTAATPAPTAA 229 TT + T A APA+D P+ P+ AN++ TAA Sbjct: 173 TTKASQLTAATATNAPAIDTSAVAPKTLVAHPPTTANINNVVIDDQTAA 221 >UniRef50_A7HTY1 Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HTY1_PARL1 Length = 374 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 22/277 (7%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 EA + GA LR AR + G +++A+ L ++ + +EE + A + G++RSYA Sbjct: 32 EAESVGADLRAARLRRGDDIRSIAQALRIRRDQIEALEEGRHDELPARAYAVGFVRSYAE 91 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + ++ + + RAA A + + R+ G T + L V G+ G Sbjct: 92 YLGLDSRHIVQRYKDELDGRAAAAAELHFPDAAEARRLPKG---TALIVALVVASGIYGG 148 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA-SVDTTAT 189 W K+ E +TT ++ ++ E+ +S T D A+ +TP A +V Sbjct: 149 WLLT--KSTDEMMTTRTAATAPAVAPIVEEVKS----PGTRGDSASAATPRADAVPVVRV 202 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATP------APTAATTPDGAAPLPTDQA 243 P TA PQ +P+ A VD P AA A LP Sbjct: 203 PGLAPVATAEQNMSTPQSLYDPAPAPATVDAEGLPLEDSGEVEMAALEESAAVELPPLPE 262 Query: 244 GVTTPVA----DPNALVMNFTADCWLEVTDATGKKLF 276 G TP D +V WL + D TG+ L Sbjct: 263 G--TPYGAENVDGRVVVRARRDGAWLRIEDGTGQVLI 297 >UniRef50_C6NWC2 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWC2_9GAMM Length = 357 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 D+ EA LR REQ G + Q VAERL ++ + V +E+ + A + F RGY+++ Sbjct: 4 DRQEATDDFDVLRRVREQRGWTPQQVAERLHIRAAQVEALEQARFEALPGAAFARGYLKN 63 Query: 68 YAR 70 YAR Sbjct: 64 YAR 66 >UniRef50_C9S0F6 Transcriptional regulator, XRE family n=7 Tax=Geobacillus RepID=C9S0F6_GEOSY Length = 297 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 65/304 (21%), Positives = 112/304 (36%), Gaps = 37/304 (12%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G RLR ARE+ +S + E ++ + IEE + ++R +IR YA V + Sbjct: 5 GKRLREAREEKKMSLDELQEMTKIQKRYLIGIEEGNYAIMPGNFYVRAFIRQYAEAVGLD 64 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 +EL ++ P P Q+ S K R++ + GA W Sbjct: 65 PDELFEQYKQDIPQSYQDDIP-QTLSRVKTRQQ----------------LSAEGAKW--- 104 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 + + A + + V L +P T ++P + ++ Sbjct: 105 -------LDWLPKVIVAAVVIGAAVLVWVLLQHGAANEPPTKTSPKTAEVEKPKHSPLEQ 157 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG--VTTPVADPN 253 PA + + A Q N PAPT GAA T++ G T VA Sbjct: 158 AKQKQPAKETDEKATNENGQQN----EQPAPTGEEEQPGAAMNVTEKRGNTATIEVASSG 213 Query: 254 ALVMNFTAD--CWLEVTDATGKKLFSG--MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 A + ++ W+EV + G + G + +L+ ++ +KIG V ++ Sbjct: 214 AFSIELSSKGTSWVEVYNTKGHTFYRGNLTSGQTKTFDLSAESEVWVKIGRTLDVDMKVN 273 Query: 310 GKPV 313 G+P Sbjct: 274 GQPF 277 >UniRef50_A1WXZ1 Transcriptional regulator, XRE family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXZ1_HALHL Length = 196 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 38/67 (56%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G +LR ARE G + +AV L L V +EED TF+RGY+R+YARLV Sbjct: 31 SPGQQLRRAREAQGRTVRAVGASLNLPADRVTALEEDDDERLPPPTFVRGYLRAYARLVG 90 Query: 74 IPEEELL 80 + E ++ Sbjct: 91 LDPEAVV 97 >UniRef50_Q21W27 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21W27_RHOFD Length = 312 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 49/326 (15%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 ++ GA LR ARE GL A+A L + VS + +E D+ + F+R S R + Sbjct: 22 MSGGAMLRMAREAQGLHIDALAVGLKVPVSKLEALEADRFDLLPDTVFVRALAASICRTL 81 Query: 73 HI---PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 I P E LP APL + + + R DG +GLS Sbjct: 82 KIDAAPVLEQLP--RTAAPLLKTDESGINT----PFRPSGDG-------------LGLS- 121 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQ--SVPLNTSTTTDPATTSTPPASVDTT 187 +W R + + + +Q + S P N ST + A + PAS DT Sbjct: 122 SWHQLSRPFVLAVLALLLGIAVLVFFPFGQQTEVASAPENASTVS--AQPLSAPASPDT- 178 Query: 188 ATNTQTPAVTAPAPAVDPQQNA--VVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 ++ + TAP+ A + + V +N A+ AA++P P+ +G Sbjct: 179 -EDSVSVEATAPSSATNFALSGSEVAVAQNSNTAAASDALQGAASSP----PVIVPGSGA 233 Query: 246 TTPVADPNALVMNFTADCWLEVTDATG----KKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 TT L+ W+EV D+ +K S ++ + ++G P + +G Sbjct: 234 TT-----GMLIFKARGSSWIEVVDSNRVVQVRKTLSDLEV----VGVSGALPLSVVVGRA 284 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARL 327 A ++Q +GKP DL+ I N VAR Sbjct: 285 DATEVQVRGKPFDLTG-IAKNNVARF 309 >UniRef50_B9Z686 Transcriptional regulator, XRE family n=2 Tax=Chromobacterium group RepID=B9Z686_9NEIS Length = 295 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 GLS VA+RL L + + IE D+ A + F+RG++R+YAR + + L+ LE++ Sbjct: 30 GLSLGEVADRLKLSLKQLEAIEADRFEALPGAAFVRGFVRNYARFLGLDAVPLMARLEER 89 Query: 87 APLRAAKVAPM 97 P +VA + Sbjct: 90 FPSSVKEVANL 100 >UniRef50_Q31I06 Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I06_THICR Length = 138 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 2 NTEATHDQNEALTTGAR-LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 + E T D+ A T +R LR AREQ LS VAE+L + S ++ E D+ F Sbjct: 7 HQEFTSDEKPAFTDLSRALRTAREQKKLSIGDVAEQLKIASSHIQYFEGDRLDLTQLDPF 66 Query: 61 LRGYIRSYARLVHI---PEEELLP 81 RGY+R+Y+ L+++ P E + P Sbjct: 67 QRGYLRNYSELLNVDIKPYESVFP 90 >UniRef50_B7RT19 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RT19_9GAMM Length = 158 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M ++ + +T GA LR AR +Q+ V +RL L V +E D + + F Sbjct: 1 MTSDVLSQVDAFVTPGALLRKARLNADFTQREVEDRLNLMPGYVELLERDDYQSLRSPAF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQ 86 RGY+R+YA+L+ + E +L ++Q Sbjct: 61 ARGYVRAYAQLMKLEEAAVLAAFDEQ 86 >UniRef50_A3VTC9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTC9_9PROT Length = 469 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADL-ASTFLRGYIRSYARLVHI 74 GA LR AR+ +GL+++ VA + +K + IE A DL A T+ G++R+YAR+ + Sbjct: 43 GAMLRAARDAMGLTREDVARQTKIKSERLEAIET-MAIDDLPAKTYTLGFVRAYARITGL 101 Query: 75 PEEELL 80 PE+ L+ Sbjct: 102 PEDSLV 107 >UniRef50_Q1NPX4 Helix-turn-helix motif n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NPX4_9DELT Length = 333 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 131/347 (37%), Gaps = 72/347 (20%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 L+ G RLR AR G+S AE + + +T+ +EE+ A + RG+IR YA + Sbjct: 28 LSLGERLRRARSAKGVSLAQAAEAIRIHATTLAALEENNREGLPAQVYTRGFIRIYASYL 87 Query: 73 HI-PEEELLPGLEKQAPLRAA--------KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 + P+E L +E+Q AA ++ +S + RR + + LVL Sbjct: 88 GLDPDEALRLHIEEQGLPAAATTEKINIQQIMAAESMAEAPRRITGNHVFILLLLLVLAF 147 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 V G W + + E TMA E+G PL TT A Sbjct: 148 V----GYWAYTSQSRIGETDDTMA-----------EKGIFDPLADEMTTPEA-------- 184 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP---------DG 234 A T+ P + PQ + + A+ + P PT + P DG Sbjct: 185 ----AAPTELPEL--------PQALLAPASAPADSASNGEPEPTVGSVPEPPATGESNDG 232 Query: 235 A-APLPTDQAGVTTPVADPNA-------LVMNFTADCWLEVT--DATGKKLF--SGMQRK 282 A P+ T AG D A L FT D WL V D ++LF +G R+ Sbjct: 233 AEEPVATPPAGSEETAPDAEAATEALHLLEAYFTEDTWLRVKIDDEPARQLFFEAGASRQ 292 Query: 283 DGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +++IG V + + G P L + QV L L Sbjct: 293 -----WRADERIEMRIGNAGGVDLVFDGTP--LPALGPSGQVVNLDL 332 >UniRef50_B7A9Q8 PEGA domain protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9Q8_THEAQ Length = 287 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 38/72 (52%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G RLR ARE GLS + AERL LK + +E + A RGY+R YA L+ + Sbjct: 5 GERLRRAREAKGLSLKEAAERLALKAGVLEALEACRFEALPEPPLARGYLRRYALLLGLD 64 Query: 76 EEELLPGLEKQA 87 E LL +QA Sbjct: 65 PEPLLALYPRQA 76 >UniRef50_B3R1K3 Putative transcriptional regulator yfgA; cro/C1-type DNA-binding domain n=2 Tax=Cupriavidus RepID=B3R1K3_CUPTR Length = 328 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 5/129 (3%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 A GA L RE +S + V+ RL + S +R IE A TF +G +R+YAR+ Sbjct: 30 AREIGAALAREREAQRMSVEDVSARLKVAASKLRAIEAANLQALPDVTFAKGVMRAYARM 89 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLG-----KRRKKRDGWLMTFTWLVLFVVIG 126 +H+ + LL + + + A++A + + + R + G + WL L V Sbjct: 90 LHVDIDPLLARFQPRPVAQVAEIARQREGGINAAFDDRNRFRSGGNGGRWIWLALVAVGV 149 Query: 127 LSGAWWWQD 135 +G W+ D Sbjct: 150 AAGIWFGLD 158 >UniRef50_D0XYY9 Transcriptional regulator, XRE family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XYY9_9CAUL Length = 362 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 Q+E GA L+ ARE GLS Q VAE ++ V +EE + A + F GY+R+Y Sbjct: 35 QHEPADIGAALKAAREARGLSLQQVAEATRIRQGYVEALEEMRLEALPSRPFTIGYVRAY 94 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 A L+ + + + + AP A++ + + + R R ++ LV+ ++ Sbjct: 95 AALLGMDGDTAVARFKTDAPDEGAEL--REPVGVRRERDPRLALILAGGVLVVGAIL 149 >UniRef50_C1DD42 Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD42_LARHH Length = 302 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 + W+ +TDA KL G +++G+ PY++ IG Q+ + G+PVDL+ + Sbjct: 235 NAWVSITDANDDKLVYGEVTAGSERSVSGKPPYRIVIGNAQHAQLFFNGQPVDLASKTK- 293 Query: 322 NQVARLTL 329 A+LTL Sbjct: 294 GSTAKLTL 301 >UniRef50_C9KPY7 Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY7_9FIRM Length = 311 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 11/94 (11%) Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 AP P GV + FTADCWLEV A GK ++ G +K + G Sbjct: 224 APAPKTYDGVE--------VTATFTADCWLEVK-ADGKTVYEGTLKKGDSQTWKGTDKVT 274 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +++G AV GK DL +T QVA T Sbjct: 275 VRVGDAGAVSFSVNGK--DLGTAGKTGQVANKTF 306 >UniRef50_A6SZX1 Uncharacterized conserved protein n=2 Tax=Oxalobacteraceae RepID=A6SZX1_JANMA Length = 343 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 AT ++ GA+L R++ G + + VA +L L ++ +EED A +RG+ Sbjct: 21 ATEKPEPVISAGAQLATLRQERGWTVEQVANQLNLASRQIQALEEDNYAALPGMVIVRGF 80 Query: 65 IRSYARLVHIPEEELLPGLE 84 IRSY++++ + +L G++ Sbjct: 81 IRSYSKVLRVDPAPILAGIK 100 >UniRef50_Q1GSR3 Transcriptional regulator, XRE family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GSR3_SPHAL Length = 285 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 39/72 (54%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 TG RLR ARE GLS VA R + + IE+ T++ G+ R+YAR V++ Sbjct: 18 TGDRLRLAREAAGLSLADVATRTRITQRHLAAIEKSDFSELPGRTYVTGFARAYARAVNL 77 Query: 75 PEEELLPGLEKQ 86 PE E+ + ++ Sbjct: 78 PEAEIGAAIRRE 89 >UniRef50_B9ZLM4 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLM4_9GAMM Length = 404 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 85/352 (24%), Positives = 132/352 (37%), Gaps = 58/352 (16%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE GL +A R+ L T+ D+E ++ +A ++RGY+R+ AR + + + Sbjct: 70 LRRAREAAGLDTATLAHRIHLGRGTLEDLEANRFDH-MAPAYVRGYLRACARELGVNADP 128 Query: 79 LLPGLEKQA----PLRAAKVAPMQSFSLGKRRKKRDGW-----------LMTFTWLVL-- 121 L E LRA VA + S +RR W L + W Sbjct: 129 WLRAFEGHGLTEPELRA--VATASARSKRRRRSSAPYWLAFLLVLALLGLGVYAWTERGG 186 Query: 122 ----FVVIGLSGAWWWQDRKAQQEEITTMA--DQSSA-------------ELSSNSEQGQ 162 F +G W DR A E A D+ SA + G+ Sbjct: 187 GTPSFPSLG----WLEDDRSAPSEGAVDRAPHDELSAPPALVEEAEPEPEAPVAAETDGE 242 Query: 163 SVPLNTSTTTDPAT-TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTA 221 + ++PA T T P + TA + P TA V+ + VS A Sbjct: 243 ASETEAERDSEPAMDTLTEPMPTEDTAADDTAPEDTASEDTVESSGSGPVSEMALLTGGA 302 Query: 222 -ATPAPTAATTPDGAAPLPTD--QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSG 278 A P P DGA P + + GV V D T W+E+ +A + + +G Sbjct: 303 RAVPDPEE----DGAEPNGGEAGRDGVYRLVLD-------VTETSWVEIRNADDEVVLTG 351 Query: 279 MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + L P ++ +G V++ G+ D +R+++ AR L Sbjct: 352 VLSSGDREELELTLPGRVVLGNARGVELTLDGESFDFETHVRSDRTARFDLE 403 >UniRef50_A0LDN4 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDN4_MAGSM Length = 566 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA L+ ARE GL+ + V ++ ++ +E+ A TF G++R Y R + + Sbjct: 26 GAELKQAREARGLTIEQVHRATRIREGHLQALEQGTAELLPGQTFAVGFMRIYIRFLGLD 85 Query: 76 EEELLPGLE-----KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 E L+ ++ L AP S R + GWL+ + +VL + L G Sbjct: 86 EARLIDRFSAAMSYRRVSLDTEFFAPPTETS----RTRPGGWLIVISVVVLAI---LFGG 138 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQ 162 + W +R Q + A SS S++ Q Sbjct: 139 YEWINRPPQDPPVAVPAPVSSRLSEQESDEAQ 170 >UniRef50_UPI0001788661 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788661 Length = 340 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G +LR AR Q G+S V E ++ + IE S ++R +I++YA V I Sbjct: 5 GQQLREARLQKGMSLDDVQEMTKIRKRYLEAIEAGDYKVLPGSFYVRAFIKTYAEAVGID 64 Query: 76 EEELLPGLEKQAPLRAAKVAPMQ-------SFSLGKRRKKRDGWLMTFTWLVLFVVI 125 +ELL G ++ P ++ A M+ S +R K L+ +T+ +L VV+ Sbjct: 65 PDELLEGHKQDVP-KSEPEATMEPVIQKRASRPTAERNMKWLPTLLMWTFPILIVVV 120 >UniRef50_C8X3H6 XRE family transcriptional regulator n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3H6_DESRD Length = 342 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 76/332 (22%), Positives = 127/332 (38%), Gaps = 45/332 (13%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA LR RE+ L+ V ER + S ++ IE+ + + RG+I++YA L+ + Sbjct: 7 GALLRQERERQNLALSDVVERTKISRSCIQAIEKGDSEGLPHPVYARGFIKNYATLLGLD 66 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFS------LGKRRKKRDGWL-MTFTWLVLFVVIGLS 128 +L ++Q L V ++S + K R L + L F+++G Sbjct: 67 GAKLAESFDRQYGLEEEGVV-LESGDAAAEEVISKPEASRHSALAVGLISLSFFILLG-- 123 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 G W D + Q L + +G + +++ P S P D+++ Sbjct: 124 GGWLIYDIYFSSPTVPISEPQPP--LGQDESEGLEMESESASAPKP---SVPGDGGDSSS 178 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSP-----SQANVDTAATPA------------PTAATT 231 + T + P A NA + P S N T ATPA A T Sbjct: 179 SETGAAMDSEPVRAPGNATNASLQPVNSTTSPTNGQTNATPAVATNASSASSSQAQATPT 238 Query: 232 PDGAAPLPT-----DQAGVTT--PVADPNALVMNFTAD--CWLEV-TDATGKKLFSGMQR 281 P+ P T +Q+G T P A+ V+ A CW D + + ++ R Sbjct: 239 PEVEEPEATSVDTAEQSGQNTAAPSAEVEDKVLQIAASEACWFRAEVDGSTRDVY---LR 295 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 + L +L++G V + Y G+ V Sbjct: 296 PGETIALHFDESLELRLGNAGGVSLMYNGESV 327 >UniRef50_B3DYX2 Predicted transcriptional regulator contains Xre-like HTH domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DYX2_METI4 Length = 369 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 45/84 (53%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M +Q T G RL+ ARE GLS Q V++ + + +E+D+ AST Sbjct: 1 MRRRKIMEQGMKQTIGQRLQAAREAQGLSLQTVSKITKILPEQLAALEQDQYEKIPASTQ 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLE 84 +RG++R YAR + + E+ LL L+ Sbjct: 61 VRGFVRIYARTLGMDEKPLLDELD 84 >UniRef50_Q2W6V6 Uncharacterized protein n=3 Tax=Magnetospirillum RepID=Q2W6V6_MAGSA Length = 434 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 75/358 (20%), Positives = 129/358 (36%), Gaps = 66/358 (18%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA LR ARE +G + A+ L ++ + +E+ + T+ G++RSYA + + Sbjct: 59 GATLRAAREGMGKTLPDCAKLLRIRQLYLEALEDGRHRDLPGGTYAAGFLRSYAEYLGLD 118 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 EE++ ++ K +F + G + F L+L V G W+ Sbjct: 119 SEEMVRRFREEG-AGGFKNRTELTFPSPVSEGRIPGGAVIFLGLILAAVA--YGGWYLLS 175 Query: 136 RKAQQ--EEITTMADQ------SSAELSSNSEQGQSVPLNTSTTTDPAT----------- 176 + E + + D+ A L+ ++ G T D Sbjct: 176 SSETKVTEMVPPLPDRLAGVLNRQASLTGEAKTGDVAKPGDDKTKDEVVPPVEAEEDKPS 235 Query: 177 ----------------TSTPPASVDTTATNTQTPAVTAPAP---AVDPQQNAVVSPSQAN 217 T PA +D A + P V AP P V+P + P A Sbjct: 236 AANPAPAATEPAKVEAPKTEPAKID--APKVEPPKVEAPKPEPAKVEPPKVEAPKPEPAK 293 Query: 218 VD----TAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA-----------------LV 256 V+ A P P P AP + A V P A+ A +V Sbjct: 294 VEPPKVEAPKPEPAKVEAPKVEAPK-AEPAKVEPPKAETPATAVADGKVYGTEYADSRVV 352 Query: 257 MNFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 + T DCW++V + G L S + R+ + + ++ L +G ++++ G+ V Sbjct: 353 LKATGDDCWIQVREVDGSLLMSRLLRRGDSFRVPNRSGLSLMVGNAGSLEVNVDGRKV 410 >UniRef50_A0AIJ7 Complete genome n=3 Tax=Listeria RepID=A0AIJ7_LISW6 Length = 321 Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust. Identities = 66/315 (20%), Positives = 117/315 (37%), Gaps = 55/315 (17%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G +L+ AR + GLS + + ++ + IEE + R +I+ YA V + Sbjct: 5 GDKLKQARREKGLSLDDLQQITKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEAVGLD 64 Query: 76 EEELLPGLEKQAP-------------LRAAKVAPMQSFSLGKRRKKRDGWLMTF--TWLV 120 L E + P +K PM + S+G + R+ + + Sbjct: 65 SATLFDEFESEVPDTPQQEVVNNEPTRVQSKRNPMPAQSVGNQTNSRNRFFDILPKILIA 124 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVP-LNTSTTTDPATTST 179 LF+V L W++ + D S+ ++ +++ S P + +T TS Sbjct: 125 LFIVFILFIIWFF---------LLNKQDNSTEKVKTDT----SNPTVKVEDSTKDKDTSK 171 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 S DTT +T + D +++ + DT+ T T A Sbjct: 172 DTTSKDTTKKDTTS----------DDKKSTEEANKDKKEDTSKELEITKGETSGNATTY- 220 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPY-KLKI 298 T D AL ++ T D W+ V+DA+G + N+ L+ Q P ++ + Sbjct: 221 ------TVKNTDKMALSLSATGDSWIGVSDASGATI--------QNVTLSAQNPSAEIDL 266 Query: 299 GAPAAVQIQYQGKPV 313 G V + PV Sbjct: 267 GTNKTVSVVIGNSPV 281 >UniRef50_B6WRD8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRD8_9DELT Length = 334 Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust. Identities = 73/332 (21%), Positives = 112/332 (33%), Gaps = 63/332 (18%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA L RE+ GLS VA L + ++ +E A + +G++R+YA + + Sbjct: 7 GAALCAERERRGLSLDDVAAHLKISSRLIQALESGDLSALPHPAYTKGFLRAYASYMALD 66 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKR----------RKKRDGWLMTFTWLVLFVVI 125 E + P A + M G R R+ GWL F L+L V+ Sbjct: 67 PEAVAEVAHALQPAAATECTVMGG-DEGLRSNPAILRHGARQGIAGWLRVFILLIL--VV 123 Query: 126 GLSGAWWWQDRKAQQEEITTMADQS---------------------------SAELSSNS 158 L+G W ++ +E T +QS A Sbjct: 124 ALAGGGWMLWQRGVFKEFTGGKEQSLPTAEPAAVAPAPEPMAPAPSATTPAAPAASVPAG 183 Query: 159 EQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV 218 Q P T PA P P P + P ++ A + Sbjct: 184 GQAAPAPQGNGGTAAPAGGVAP------------VPGSVQPERSAAPAYTGMMDTRPAEL 231 Query: 219 DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSG 278 T AAT D AA P+ AG+ + +V+ +CW+ T + FS Sbjct: 232 TWGQT--ANAATVQDTAAQDPSLPAGM-------HRVVVTGIGECWMRATVDGEVRQFS- 281 Query: 279 MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 K + L ++K+G VQ+ Y G Sbjct: 282 -VHKGDIITLEFAKALEVKLGNAGGVQVSYDG 312 >UniRef50_C0X144 Transcription regulation protein n=22 Tax=Enterococcus faecalis RepID=C0X144_ENTFA Length = 288 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 10/138 (7%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 ++ G L+ AR Q +S + + ++ + IE++ + + ++R +IR YA Sbjct: 3 SVNIGETLKEARLQKNISIDELQQMTKIQKRYLEIIEQNDFESLPGTFYVRAFIRQYASA 62 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK-----KRDGWLMTFTWLVLFVVIG 126 V + +L+ + + P + P+ G R++ K+ WL+ + F +IG Sbjct: 63 VGLDGNQLVDIYDGKEPAIVEEPKPVYEELEGSRKQLHDEEKQSSWLLRNLPAIAFSLIG 122 Query: 127 LSGA-----WWWQDRKAQ 139 L+ A WQD+KA+ Sbjct: 123 LAIAVVVLYIMWQDQKAE 140 >UniRef50_D2L1A7 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1A7_9DELT Length = 454 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 37/64 (57%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR RE+ GL+ + V++++ + S + IEE + +G+I++YARL+ + Sbjct: 7 GTILREERERQGLTIEDVSDKIKITRSCLTAIEEGNQSVLPHPVYAKGFIKNYARLLGVD 66 Query: 76 EEEL 79 +EE Sbjct: 67 QEEF 70 >UniRef50_C1XSS0 Uncharacterized conserved protein n=2 Tax=Meiothermus RepID=C1XSS0_9DEIN Length = 307 Score = 40.8 bits (94), Expect = 0.074, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 TG RL+ ARE G S +A +L L+ + + +EE + + RGY+R YA+++ + Sbjct: 4 TGRRLKEAREAQGRSLAEMARQLSLRKAILEALEECRYEELPEAALSRGYLRRYAQILGL 63 Query: 75 PEEELL 80 E LL Sbjct: 64 DPEPLL 69 >UniRef50_B0THU0 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THU0_HELMI Length = 300 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 67/327 (20%), Positives = 123/327 (37%), Gaps = 52/327 (15%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LR AREQ LS + V ++++ + +EE + G++RSYA+ + Sbjct: 3 SLGLVLRQAREQKQLSLRQVEAETNIRLAYLTALEEGNYDLLPGRVYGVGFMRSYAKYLG 62 Query: 74 IPEEELLPGL-------EKQAPLRAAKVAPMQSFSLGKRRKK-----RDGWLMTFTWLVL 121 + L+ + E+++PL + + R+K R G ++ + L Sbjct: 63 LDPAPLIEAMKHDWKTEEEESPL------------VTEEREKAYSAPRTGGIVKYAGYGL 110 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 V ++G + R ++++ ++S G P T ++ Sbjct: 111 -AVAAIAGLVFVSARLPDKDQLEPNRPDGRVAINSTKPSG---PAAADGTGALGSSGVLG 166 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 AS A+N + AP + P + AV P+ PA AP P+ Sbjct: 167 ASPGAQASNGAGADPVSLAPGLSPVEPAVAQPAANGEKAPGVPA---------VAPAPSG 217 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A V D CW+ V+ G+ + GM + TG+ + +G Sbjct: 218 VAVTLRVVQD----------RCWMSVSQ-DGQPAYEGMVNVGDAMTFTGKDKVNVVLGNA 266 Query: 302 AAVQIQYQGKPV----DLSRFIRTNQV 324 AV++ GK + D+ + I+ V Sbjct: 267 GAVEVILNGKSLGTLGDVGQVIKEEFV 293 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7LKC2 Cytoskeleton protein rodZ n=62 Tax=Enterobacteri... 373 e-102 UniRef50_A7MGV6 Cytoskeleton protein rodZ n=51 Tax=Enterobacteri... 330 4e-89 UniRef50_C8Q4J6 Transcriptional regulator, XRE family n=8 Tax=En... 329 1e-88 UniRef50_B1JS04 Cytoskeleton protein rodZ n=32 Tax=Enterobacteri... 323 6e-87 UniRef50_C4UGF5 Uncharacterized HTH-type transcriptional regulat... 304 4e-81 UniRef50_D2TXC4 DNA-binding protein n=1 Tax=Arsenophonus nasonia... 294 4e-78 UniRef50_C6CAL7 Transcriptional regulator, XRE family n=1 Tax=Di... 292 8e-78 UniRef50_D1P3Q8 Putative membrane protein n=3 Tax=Providencia Re... 287 3e-76 UniRef50_B2Q0X0 Putative uncharacterized protein n=1 Tax=Provide... 285 2e-75 UniRef50_C2LI02 Helix-turn-helix DNA-binding domain protein n=3 ... 277 5e-73 UniRef50_Q1ZRE7 Hypothetical DNA-binding protein n=4 Tax=Photoba... 258 2e-67 UniRef50_Q6LU50 Hypothetical DNA-binding protein n=1 Tax=Photoba... 255 2e-66 UniRef50_B8K783 Integral membrane protein n=4 Tax=Vibrio RepID=B... 253 4e-66 UniRef50_Q5E773 Integral membrane protein n=3 Tax=Aliivibrio Rep... 253 6e-66 UniRef50_A0KJ43 Putative uncharacterized protein n=2 Tax=Aeromon... 252 1e-65 UniRef50_D0I7P6 Putative uncharacterized protein n=1 Tax=Grimont... 252 2e-65 UniRef50_C9NQN4 Putative uncharacterized protein n=1 Tax=Vibrio ... 251 3e-65 UniRef50_A6AQ33 Integral membrane protein n=14 Tax=Vibrionales R... 250 6e-65 UniRef50_C4LC36 Transcriptional regulator, XRE family n=1 Tax=To... 248 3e-64 UniRef50_C9P6C4 Putative uncharacterized protein n=2 Tax=Vibrio ... 246 7e-64 UniRef50_B0TLI3 Putative uncharacterized protein n=2 Tax=Shewane... 242 1e-62 UniRef50_B8CKR0 DNA-binding protein, putative n=1 Tax=Shewanella... 237 4e-61 UniRef50_Q3ICZ4 Putative transcriptional regulator, HTH domain n... 224 3e-57 UniRef50_A1S864 Putative uncharacterized protein n=1 Tax=Shewane... 223 7e-57 UniRef50_A4C7F7 Putative transcriptional regulator, HTH domain n... 223 9e-57 UniRef50_Q085U7 Putative uncharacterized protein n=1 Tax=Shewane... 221 4e-56 UniRef50_B4RV90 Putative uncharacterized protein n=2 Tax=Alterom... 220 5e-56 UniRef50_A6FA10 Putative uncharacterized protein n=1 Tax=Moritel... 219 9e-56 UniRef50_Q12PT5 Putative uncharacterized protein n=1 Tax=Shewane... 218 2e-55 UniRef50_B1KKJ1 Putative uncharacterized protein n=1 Tax=Shewane... 218 3e-55 UniRef50_A3QCG1 Putative uncharacterized protein n=1 Tax=Shewane... 217 3e-55 UniRef50_Q0HKW0 Putative uncharacterized protein n=11 Tax=Shewan... 214 3e-54 UniRef50_A6ADB9 Integral membrane protein (Fragment) n=34 Tax=Vi... 213 8e-54 UniRef50_UPI0000E0F4D9 hypothetical protein GHTCC_02974 n=1 Tax=... 213 1e-53 UniRef50_C9R6E7 Putative uncharacterized protein n=2 Tax=Pasteur... 212 1e-53 UniRef50_B9CX69 Putative uncharacterized protein n=2 Tax=Actinob... 211 2e-53 UniRef50_Q5QYA8 Predicted transcriptional regulator, contains N-... 210 8e-53 UniRef50_C6AJL0 Putative uncharacterized protein n=1 Tax=Aggrega... 210 8e-53 UniRef50_Q47WB9 Putative uncharacterized protein n=1 Tax=Colwell... 209 9e-53 UniRef50_A3N1H9 Putative uncharacterized protein n=4 Tax=Pasteur... 208 2e-52 UniRef50_A8FT69 Putative uncharacterized protein n=1 Tax=Shewane... 208 3e-52 UniRef50_Q7VME3 Putative uncharacterized protein n=1 Tax=Haemoph... 207 5e-52 UniRef50_Q1QTK9 Transcriptional regulator, XRE family n=1 Tax=Ch... 206 9e-52 UniRef50_C6XEI7 Putative uncharacterized protein n=1 Tax=Methylo... 205 2e-51 UniRef50_C7R5S7 Putative uncharacterized protein n=1 Tax=Kangiel... 204 5e-51 UniRef50_A6VQX7 Helix-turn-helix domain protein n=4 Tax=Pasteure... 203 8e-51 UniRef50_Q15R55 Transcriptional regulator, XRE family n=1 Tax=Ps... 203 1e-50 UniRef50_C6MCA6 Putative uncharacterized protein n=1 Tax=Nitroso... 201 2e-50 UniRef50_A0YCF8 Putative uncharacterized protein n=1 Tax=marine ... 201 2e-50 UniRef50_A3WP02 Predicted transcriptional regulator, contains N-... 201 3e-50 UniRef50_Q2BGS7 Putative uncharacterized protein n=1 Tax=Neptuni... 201 4e-50 UniRef50_Q57065 Uncharacterized protein HI0367 n=17 Tax=Pasteure... 197 5e-49 UniRef50_UPI0001698B56 hypothetical protein Epers_35392 n=1 Tax=... 195 2e-48 UniRef50_A1TZP9 Putative uncharacterized protein n=1 Tax=Marinob... 195 3e-48 UniRef50_B8F8B5 Putative uncharacterized protein n=1 Tax=Haemoph... 194 4e-48 UniRef50_A3Y633 Putative uncharacterized protein n=1 Tax=Marinom... 191 3e-47 UniRef50_A4BSV3 Putative uncharacterized protein n=1 Tax=Nitroco... 191 4e-47 UniRef50_Q1H0U8 Putative uncharacterized protein n=1 Tax=Methylo... 189 1e-46 UniRef50_A6VV05 Putative uncharacterized protein n=1 Tax=Marinom... 188 2e-46 UniRef50_A4XY33 Helix-turn-helix domain protein n=1 Tax=Pseudomo... 188 3e-46 UniRef50_C5S9Y0 Transcriptional regulator, XRE family n=1 Tax=Al... 185 3e-45 UniRef50_A5EVN3 Putative uncharacterized protein n=1 Tax=Dichelo... 184 5e-45 UniRef50_C0N2P2 Putative uncharacterized protein n=1 Tax=Methylo... 183 1e-44 UniRef50_B3PDM0 Putative DNA-binding protein n=1 Tax=Cellvibrio ... 181 2e-44 UniRef50_A7JX56 Putative uncharacterized protein n=2 Tax=Mannhei... 181 2e-44 UniRef50_D0KWA6 Putative uncharacterized protein n=1 Tax=Halothi... 181 2e-44 UniRef50_Q2SDW3 Uncharacterized protein conserved in bacteria n=... 181 3e-44 UniRef50_C6WV26 Putative uncharacterized protein n=1 Tax=Methylo... 181 3e-44 UniRef50_A1K3Y8 Transcriptional regulator n=2 Tax=Rhodocyclaceae... 180 9e-44 UniRef50_A6EWG5 Putative uncharacterized protein n=1 Tax=Marinob... 179 1e-43 UniRef50_A3JJP6 Putative uncharacterized protein n=1 Tax=Marinob... 179 1e-43 UniRef50_Q3SL71 Putative uncharacterized protein n=1 Tax=Thiobac... 177 5e-43 UniRef50_Q47BR5 Putative uncharacterized protein n=1 Tax=Dechlor... 176 7e-43 UniRef50_B8GTN5 Transcriptional regulator n=1 Tax=Thioalkalivibr... 176 8e-43 UniRef50_B0KPI6 Transcriptional regulator, XRE family n=22 Tax=P... 176 9e-43 UniRef50_C6NZ97 Putative uncharacterized protein n=1 Tax=Siderox... 176 1e-42 UniRef50_C4KCN7 Transcriptional regulator n=1 Tax=Thauera sp. MZ... 176 1e-42 UniRef50_C8NBB0 Putative uncharacterized protein n=1 Tax=Cardiob... 175 2e-42 UniRef50_C4GFD8 Putative uncharacterized protein n=1 Tax=Kingell... 174 5e-42 UniRef50_Q0AE41 Putative uncharacterized protein n=2 Tax=Nitroso... 173 8e-42 UniRef50_B2U9U8 Transcriptional regulator, XRE family n=6 Tax=Ra... 173 9e-42 UniRef50_C8PVJ8 Putative uncharacterized protein n=1 Tax=Enhydro... 173 1e-41 UniRef50_B5JY14 Putative uncharacterized protein n=1 Tax=gamma p... 172 1e-41 UniRef50_C7LQ79 Transcriptional regulator, XRE family n=1 Tax=De... 171 3e-41 UniRef50_Q1LLJ0 Transcriptional regulator, XRE family n=2 Tax=Cu... 171 4e-41 UniRef50_Q0A987 Transcriptional regulator, XRE family n=1 Tax=Al... 170 6e-41 UniRef50_C5BLW0 Transcriptional regulator, Cro/CI family n=1 Tax... 166 1e-39 UniRef50_Q2LVM8 Hypothetical membrane protein n=1 Tax=Syntrophus... 166 1e-39 UniRef50_Q608X3 Putative uncharacterized protein n=1 Tax=Methylo... 164 3e-39 UniRef50_B5EJF2 Transcriptional regulator, XRE family n=2 Tax=Ac... 164 4e-39 UniRef50_C5TVA8 XRE family transcriptional regulator n=3 Tax=Des... 163 6e-39 UniRef50_C5V4P9 Putative uncharacterized protein n=1 Tax=Gallion... 163 7e-39 UniRef50_Q1ZDU0 Putative uncharacterized protein n=1 Tax=Psychro... 163 1e-38 UniRef50_C0EJV6 Putative uncharacterized protein n=4 Tax=Neisser... 160 6e-38 UniRef50_Q0VND9 Putative uncharacterized protein n=2 Tax=Alcaniv... 160 7e-38 UniRef50_C6IW30 Helix-turn-helix domain-containing protein n=1 T... 157 5e-37 UniRef50_B5WST2 Transcriptional regulator, XRE family n=4 Tax=Bu... 157 6e-37 UniRef50_C7RN39 Putative uncharacterized protein n=1 Tax=Candida... 155 2e-36 UniRef50_Q13X27 Transcriptional regulator, XRE family n=26 Tax=B... 155 2e-36 UniRef50_A4JEP1 Transcriptional regulator, XRE family n=6 Tax=Bu... 154 3e-36 UniRef50_C7I047 Putative uncharacterized protein n=1 Tax=Thiomon... 149 9e-35 UniRef50_C8QXV7 Putative uncharacterized protein n=1 Tax=Desulfu... 149 2e-34 UniRef50_Q21W27 Putative uncharacterized protein n=1 Tax=Rhodofe... 146 7e-34 UniRef50_C9S0F6 Transcriptional regulator, XRE family n=7 Tax=Ge... 146 9e-34 UniRef50_C6BV70 Transcriptional regulator, XRE family n=1 Tax=De... 145 2e-33 UniRef50_C3X7I5 Predicted protein n=2 Tax=Oxalobacter formigenes... 143 7e-33 UniRef50_D1RE75 Putative uncharacterized protein n=1 Tax=Legione... 143 1e-32 UniRef50_B9Z686 Transcriptional regulator, XRE family n=2 Tax=Ch... 141 2e-32 UniRef50_A7HTY1 Putative uncharacterized protein n=1 Tax=Parviba... 141 3e-32 UniRef50_Q5ZV95 DNA-binding protein, putative n=4 Tax=Legionella... 140 9e-32 UniRef50_B4SSW5 Transcriptional regulator, XRE family n=20 Tax=X... 139 2e-31 UniRef50_C6N7L3 DNA-binding protein, putative n=1 Tax=Legionella... 138 2e-31 UniRef50_C5CXG5 Putative uncharacterized protein n=1 Tax=Variovo... 136 2e-30 UniRef50_B1XXL4 Putative uncharacterized protein n=1 Tax=Leptoth... 135 2e-30 UniRef50_Q3YJ01 Putative uncharacterized protein (Fragment) n=1 ... 135 2e-30 UniRef50_Q21KT4 Putative uncharacterized protein n=1 Tax=Sacchar... 134 5e-30 UniRef50_A9KFU7 Integral membrane protein n=6 Tax=Coxiella burne... 134 5e-30 UniRef50_C6NWC2 Putative uncharacterized protein n=1 Tax=Acidith... 133 1e-29 UniRef50_A1SU38 Putative uncharacterized protein n=1 Tax=Psychro... 126 1e-27 UniRef50_UPI0001A447F2 hypothetical protein PcarcW_15601 n=1 Tax... 121 3e-26 UniRef50_Q8D1Y4 YfgA protein n=1 Tax=Wigglesworthia glossinidia ... 118 3e-25 UniRef50_Q3A2Z7 Putative uncharacterized protein n=1 Tax=Pelobac... 117 7e-25 UniRef50_A5WGQ2 Uncharacterized protein-like protein n=3 Tax=Psy... 116 1e-24 UniRef50_A8TN86 Putative uncharacterized protein n=1 Tax=alpha p... 112 2e-23 UniRef50_A7C763 Putative uncharacterized protein n=1 Tax=Beggiat... 110 6e-23 UniRef50_Q2Y6F4 Putative uncharacterized protein n=1 Tax=Nitroso... 110 6e-23 UniRef50_A9D324 Putative uncharacterized protein n=1 Tax=Shewane... 110 7e-23 UniRef50_Q6MGU1 Putative uncharacterized protein n=1 Tax=Bdellov... 110 8e-23 UniRef50_A5FX96 Uncharacterized protein-like protein n=1 Tax=Aci... 110 9e-23 UniRef50_Q9PG41 Putative uncharacterized protein n=1 Tax=Xylella... 108 3e-22 UniRef50_B7RT19 Putative uncharacterized protein n=1 Tax=marine ... 99 2e-19 Sequences not found previously or not previously below threshold: UniRef50_C1DD42 Transcriptional regulator n=1 Tax=Laribacter hon... 163 8e-39 UniRef50_A6GNU8 Putative uncharacterized protein n=1 Tax=Limnoba... 162 1e-38 UniRef50_B3R1K3 Putative transcriptional regulator yfgA; cro/C1-... 159 1e-37 UniRef50_A6SZX1 Uncharacterized conserved protein n=2 Tax=Oxalob... 156 9e-37 UniRef50_UPI0001788661 transcriptional regulator, XRE family n=1... 146 8e-34 UniRef50_B6WRD8 Putative uncharacterized protein n=1 Tax=Desulfo... 145 2e-33 UniRef50_C0DW30 Putative uncharacterized protein n=1 Tax=Eikenel... 142 1e-32 UniRef50_B9TIK3 Putative uncharacterized protein n=1 Tax=Ricinus... 142 2e-32 UniRef50_B9ZLM4 Transcriptional regulator, XRE family n=1 Tax=Th... 142 2e-32 UniRef50_C8X3H6 XRE family transcriptional regulator n=1 Tax=Des... 140 8e-32 UniRef50_D1U5G8 Transcriptional regulator, XRE family n=1 Tax=De... 138 3e-31 UniRef50_B8IZ93 Putative uncharacterized protein n=1 Tax=Desulfo... 138 3e-31 UniRef50_D2L1A7 Transcriptional regulator, XRE family n=1 Tax=De... 138 4e-31 UniRef50_B0THU0 Putative uncharacterized protein n=1 Tax=Helioba... 136 8e-31 UniRef50_C0GM52 Putative uncharacterized protein n=1 Tax=Desulfo... 136 1e-30 UniRef50_UPI0001C42506 hypothetical protein BpOF4_19605 n=1 Tax=... 135 3e-30 UniRef50_Q1MRL8 Uncharacterized protein conserved in bacteria n=... 135 3e-30 UniRef50_A2SHB6 Putative uncharacterized protein n=1 Tax=Methyli... 134 4e-30 UniRef50_A6CQ51 Putative uncharacterized protein n=1 Tax=Bacillu... 133 8e-30 UniRef50_C1PG13 Transcriptional regulator, XRE family n=1 Tax=Ba... 132 2e-29 UniRef50_B8DPF8 Transcriptional regulator, XRE family n=1 Tax=De... 131 4e-29 UniRef50_C9KPY7 Putative transcriptional regulator n=1 Tax=Mitsu... 131 5e-29 UniRef50_C7JGR8 Putative uncharacterized protein n=8 Tax=Acetoba... 128 4e-28 UniRef50_B8DFT2 Conserved DNA-binding domain protein n=16 Tax=Li... 127 5e-28 UniRef50_A8VT56 Uncharacterized protein-like protein n=1 Tax=Bac... 127 5e-28 UniRef50_Q12AB7 Putative uncharacterized protein n=1 Tax=Polarom... 127 6e-28 UniRef50_B9MFX5 Putative uncharacterized protein n=2 Tax=Comamon... 127 6e-28 UniRef50_Q2W6V6 Uncharacterized protein n=3 Tax=Magnetospirillum... 126 1e-27 UniRef50_C4XS50 Xre family DNA-binding protein n=1 Tax=Desulfovi... 126 1e-27 UniRef50_A1TM26 Putative uncharacterized protein n=3 Tax=Acidovo... 126 2e-27 UniRef50_C0ZF19 Putative DNA-binding protein n=1 Tax=Brevibacill... 125 2e-27 UniRef50_A0AIJ7 Complete genome n=3 Tax=Listeria RepID=A0AIJ7_LISW6 125 2e-27 UniRef50_Q0BUK1 DNA-binding protein n=1 Tax=Granulibacter bethes... 125 3e-27 UniRef50_C1XSS0 Uncharacterized conserved protein n=2 Tax=Meioth... 124 3e-27 UniRef50_Q5FUT7 Putative uncharacterized protein n=1 Tax=Glucono... 123 7e-27 UniRef50_Q1NPX4 Helix-turn-helix motif n=2 Tax=delta proteobacte... 123 8e-27 UniRef50_A1HSD8 Transcriptional regulator, XRE family n=1 Tax=Th... 123 9e-27 UniRef50_Q81A13 Transcriptional regulator n=70 Tax=Bacillus cere... 123 1e-26 UniRef50_Q30ZR3 Transcriptional regulator, XRE family n=1 Tax=De... 122 1e-26 UniRef50_D1B786 Putative uncharacterized protein n=1 Tax=Therman... 121 3e-26 UniRef50_A9HJ46 Putative uncharacterized protein n=1 Tax=Glucona... 120 6e-26 UniRef50_C3AP52 Transcriptional regulator n=5 Tax=Bacillus RepID... 120 8e-26 UniRef50_C6KUI1 XRE family transcriptional regulator n=1 Tax=unc... 120 9e-26 UniRef50_B7GJN6 Uncharacterized HTH XRE-family DNA-binding prote... 120 9e-26 UniRef50_B7R9Q0 Putative uncharacterized protein n=2 Tax=Thermoa... 119 2e-25 UniRef50_A7NIS6 Transcriptional regulator, XRE family n=5 Tax=Ch... 119 2e-25 UniRef50_A0LV12 Putative uncharacterized protein n=1 Tax=Acidoth... 118 2e-25 UniRef50_Q2B1K4 Putative uncharacterized protein n=1 Tax=Bacillu... 118 3e-25 UniRef50_B1VXY3 Putative uncharacterized protein n=13 Tax=Strept... 118 3e-25 UniRef50_C7QRV5 Putative uncharacterized protein n=2 Tax=Cyanoth... 117 7e-25 UniRef50_A0LP00 Putative uncharacterized protein n=1 Tax=Syntrop... 117 8e-25 UniRef50_A5D2R2 Uncharacterized protein conserved in bacteria n=... 116 1e-24 UniRef50_C0GKG3 Putative uncharacterized protein n=1 Tax=Dethiob... 116 1e-24 UniRef50_Q82K94 Putative membrane protein n=8 Tax=Streptomyces R... 116 1e-24 UniRef50_Q8YY03 Alr1052 protein n=2 Tax=Nostocaceae RepID=Q8YY03... 116 1e-24 UniRef50_B3DYX2 Predicted transcriptional regulator contains Xre... 116 1e-24 UniRef50_D1CBL2 Putative uncharacterized protein n=1 Tax=Thermob... 115 2e-24 UniRef50_B7A9Q8 PEGA domain protein n=1 Tax=Thermus aquaticus Y5... 115 3e-24 UniRef50_B9THJ2 Putative uncharacterized protein (Fragment) n=1 ... 114 3e-24 UniRef50_A1WE17 Putative uncharacterized protein n=1 Tax=Vermine... 114 4e-24 UniRef50_A5G5P0 Helix-turn-helix domain protein n=2 Tax=Geobacte... 114 5e-24 UniRef50_B9YKG8 Putative uncharacterized protein n=1 Tax='Nostoc... 114 5e-24 UniRef50_C1D1C0 Putative uncharacterized protein n=1 Tax=Deinoco... 114 5e-24 UniRef50_C6D2C8 Transcriptional regulator, XRE family n=1 Tax=Pa... 114 6e-24 UniRef50_B1WY62 Putative uncharacterized protein n=2 Tax=Cyanoth... 113 9e-24 UniRef50_A1VNF3 Putative uncharacterized protein n=1 Tax=Polarom... 113 9e-24 UniRef50_D0XYY9 Transcriptional regulator, XRE family n=1 Tax=Ca... 113 1e-23 UniRef50_B0SW88 Putative uncharacterized protein n=2 Tax=Cauloba... 112 1e-23 UniRef50_Q39S75 Transcriptional regulator, putative n=2 Tax=Geob... 112 1e-23 UniRef50_C9LVZ7 Transcriptional regulator, XRE family n=1 Tax=Se... 112 1e-23 UniRef50_D2LSB0 Transcriptional regulator, XRE family n=1 Tax=Ba... 112 1e-23 UniRef50_A5VIW4 Uncharacterized protein n=11 Tax=Lactobacillus R... 112 2e-23 UniRef50_Q01SZ1 Transcriptional regulator, XRE family n=1 Tax=Ca... 111 4e-23 UniRef50_B6IUT5 Putative uncharacterized protein n=1 Tax=Rhodosp... 111 5e-23 UniRef50_A9AVS8 Transcriptional regulator, XRE family n=1 Tax=He... 110 6e-23 UniRef50_C9YB08 Putative uncharacterized protein n=1 Tax=Curviba... 110 6e-23 UniRef50_Q04R20 Transcriptional regulator n=7 Tax=Leptospira Rep... 110 8e-23 UniRef50_A6FNN0 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt... 110 9e-23 UniRef50_UPI0001692BFA hypothetical protein Plarl_10797 n=1 Tax=... 109 2e-22 UniRef50_C0X144 Transcription regulation protein n=22 Tax=Entero... 108 2e-22 UniRef50_A1B324 Putative uncharacterized protein n=3 Tax=Rhodoba... 108 2e-22 UniRef50_B8G090 Transcriptional regulator, XRE family n=2 Tax=De... 108 3e-22 UniRef50_C8WWM2 Transcriptional regulator, XRE family n=2 Tax=Al... 108 4e-22 UniRef50_A8U7Q8 Putative uncharacterized protein n=1 Tax=Carnoba... 107 4e-22 UniRef50_A9BMV4 Putative uncharacterized protein n=3 Tax=Comamon... 107 4e-22 UniRef50_C6E0H1 Transcriptional regulator, XRE family n=2 Tax=Ge... 107 5e-22 UniRef50_B1HR33 Putative uncharacterized protein n=2 Tax=Bacilla... 107 6e-22 UniRef50_A0LDN4 Putative uncharacterized protein n=1 Tax=Magneto... 107 6e-22 UniRef50_B0K6K4 Uncharacterized protein-like protein n=8 Tax=The... 107 7e-22 UniRef50_C6PDY6 Putative uncharacterized protein n=1 Tax=Thermoa... 106 1e-21 UniRef50_O31771 Uncharacterized membrane protein ymfM n=9 Tax=Ba... 106 2e-21 UniRef50_Q2JPT1 Putative uncharacterized protein n=2 Tax=Synecho... 105 2e-21 UniRef50_Q8EQS0 Hypothetical conserved protein n=1 Tax=Oceanobac... 105 3e-21 UniRef50_C5RCH6 Transcription regulation protein n=1 Tax=Weissel... 104 6e-21 UniRef50_Q1IKD9 Putative uncharacterized protein n=1 Tax=Candida... 103 8e-21 UniRef50_C1TRT9 Putative uncharacterized protein n=1 Tax=Dethios... 103 9e-21 UniRef50_C1SGR3 Putative uncharacterized protein n=1 Tax=Denitro... 102 1e-20 UniRef50_B8CWG9 Helix-turn-helix n=1 Tax=Halothermothrix orenii ... 102 1e-20 UniRef50_D0XIR9 Putative uncharacterized protein n=1 Tax=Brevund... 102 1e-20 UniRef50_B9XHC4 XRE family transcriptional regulator n=1 Tax=bac... 102 1e-20 UniRef50_Q67P24 Putative uncharacterized protein n=1 Tax=Symbiob... 102 2e-20 UniRef50_B5VZE7 Putative uncharacterized protein n=3 Tax=Arthros... 102 2e-20 UniRef50_Q1AW44 Putative uncharacterized protein n=1 Tax=Rubroba... 102 2e-20 UniRef50_A1BIX7 Helix-turn-helix domain protein n=1 Tax=Chlorobi... 101 3e-20 UniRef50_Q38YE1 Putative uncharacterized protein n=1 Tax=Lactoba... 100 9e-20 UniRef50_B3QS81 Putative uncharacterized protein n=1 Tax=Chloroh... 100 1e-19 UniRef50_C2ETS7 Possible transcription regulation protein n=2 Ta... 100 1e-19 UniRef50_Q9KAA2 BH2388 protein n=1 Tax=Bacillus halodurans RepID... 100 1e-19 UniRef50_B1I309 Transcriptional regulator, XRE family n=1 Tax=Ca... 100 1e-19 UniRef50_Q5WFW7 Putative uncharacterized protein n=1 Tax=Bacillu... 100 1e-19 UniRef50_C2E0V4 Possible transcription regulation protein n=8 Ta... 100 2e-19 UniRef50_Q1NC81 Putative uncharacterized protein n=1 Tax=Sphingo... 99 2e-19 UniRef50_B2A3B9 Putative uncharacterized protein n=1 Tax=Natrana... 99 2e-19 UniRef50_Q0F2U3 Transcriptional regulator, XRE family protein n=... 99 2e-19 UniRef50_Q5UF01 Uncharacterized protein n=1 Tax=uncultured alpha... 99 2e-19 UniRef50_Q2RJK2 Transcriptional regulator, XRE family n=1 Tax=Mo... 99 2e-19 UniRef50_D1C2J1 Helix-turn-helix domain-containing protein n=2 T... 99 3e-19 UniRef50_C7THU0 Xre-like DNA-binding protein n=8 Tax=Lactobacill... 98 3e-19 UniRef50_Q7ND38 Glr4398 protein n=1 Tax=Gloeobacter violaceus Re... 98 3e-19 >UniRef50_B7LKC2 Cytoskeleton protein rodZ n=62 Tax=Enterobacteriaceae RepID=RODZ_ESCF3 Length = 338 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 301/339 (88%), Positives = 306/339 (90%), Gaps = 3/339 (0%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEATHDQNEALTTG RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF Sbjct: 1 MNTEATHDQNEALTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV Sbjct: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 LFVVIGLSGAWWWQD KAQQEEITTMADQSSAEL++N QS+PL STTT P T P Sbjct: 121 LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNANGTNSQSIPLENSTTTVPEATPAP 180 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVD--TAATPAPTAATTPDGAAPL 238 A VDTTA N QTPA + PAP +PQQNAVV PSQANVD T A AP TTPD A PL Sbjct: 181 AAPVDTTA-NEQTPAASTPAPVTEPQQNAVVPPSQANVDTATTAPAAPATTTTPDTATPL 239 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 PTDQAGVTTP ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI Sbjct: 240 PTDQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 299 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ Sbjct: 300 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 338 >UniRef50_A7MGV6 Cytoskeleton protein rodZ n=51 Tax=Enterobacteriaceae RepID=RODZ_ENTS8 Length = 338 Score = 330 bits (846), Expect = 4e-89, Method: Composition-based stats. Identities = 238/339 (70%), Positives = 260/339 (76%), Gaps = 3/339 (0%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEATH++N TTG RLR AREQLGLSQQ VAERLCLKVSTVRDIEEDKAPADLASTF Sbjct: 1 MNTEATHEENAPHTTGERLRLAREQLGLSQQVVAERLCLKVSTVRDIEEDKAPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVH+PEEELLP L KQAP+R A+VAPMQ+++LGK RKKRDGWLM+FTWLV Sbjct: 61 LRGYIRSYARLVHVPEEELLPMLAKQAPVRTAQVAPMQTYALGKSRKKRDGWLMSFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPATTST 179 LFVV+GL+GAWWWQ+ KAQQEEI+TMADQSSAELS N+ QSVPLNT T D + Sbjct: 121 LFVVVGLTGAWWWQNHKAQQEEISTMADQSSAELSQNAANSPQSVPLNTDNTADASQDQA 180 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQN-AVVSPSQANVDTAATPAPTAATTPDGAAPL 238 P + D + +TQ A P P P N A P A T T A Sbjct: 181 TPPA-DLPSGDTQNTASNNPQPTPVPSSNTASQQPVVVPPSQANTDTAAQQNTTQPAQSQ 239 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 T P AD NALVMNFTADCWLEVTDATGKKLFSG+QRKD NLNL+GQAPY+LKI Sbjct: 240 LPVGQASTAPAADANALVMNFTADCWLEVTDATGKKLFSGLQRKDTNLNLSGQAPYRLKI 299 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 GAP+AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS Q Sbjct: 300 GAPSAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSVTQ 338 >UniRef50_C8Q4J6 Transcriptional regulator, XRE family n=8 Tax=Enterobacteriaceae RepID=C8Q4J6_9ENTR Length = 346 Score = 329 bits (842), Expect = 1e-88, Method: Composition-based stats. Identities = 216/347 (62%), Positives = 255/347 (73%), Gaps = 16/347 (4%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEAT +++ +TG RLR AREQ+GL+QQ VAERLCLK+STVRDIEEDK+PADLASTF Sbjct: 1 MNTEATQEKSAVHSTGERLRLAREQMGLTQQNVAERLCLKLSTVRDIEEDKSPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVH+PE++LLP + KQAP+RAAK+ PMQSFSLGKRRKKRDGWLM FTWLV Sbjct: 61 LRGYIRSYARLVHVPEDDLLPMMAKQAPVRAAKIEPMQSFSLGKRRKKRDGWLMIFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +FVVIGL+GAWWWQ+ KA Q+E+ +MADQ+ + S NS Q + N+S + A ++ Sbjct: 121 IFVVIGLTGAWWWQNHKASQDELVSMADQNGSNSSDNS-QSIPLGDNSSDASADADSNGA 179 Query: 181 PASVDTTATNTQTPAVTAPAPA---------------VDPQQNAVVSPSQANVDTAATPA 225 VD A TP PA NAVVSPSQA VDT PA Sbjct: 180 GTPVDNGAGAVATPDSATNTPAQASNAPAATSAPATATQGNDNAVVSPSQAPVDTTPPPA 239 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 + A A LPT AGV+ +DPNALVMNF+ADCWLEVTDA+GKKLFSG+QR G Sbjct: 240 TSPAPANSVAGQLPTGGAGVSQASSDPNALVMNFSADCWLEVTDASGKKLFSGLQRSGGK 299 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 L+L GQ PY+LKIGAPAAVQ+QYQ +PVDLSRFIR NQVARLT+ A+ Sbjct: 300 LSLAGQPPYRLKIGAPAAVQVQYQNQPVDLSRFIRNNQVARLTVGAQ 346 >UniRef50_B1JS04 Cytoskeleton protein rodZ n=32 Tax=Enterobacteriaceae RepID=RODZ_YERPY Length = 368 Score = 323 bits (827), Expect = 6e-87, Method: Composition-based stats. Identities = 201/368 (54%), Positives = 237/368 (64%), Gaps = 36/368 (9%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEA+ DQ T G RLR ARE LGL+QQ VAERLCLKVST+RDIEED A A+LASTF Sbjct: 1 MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGYIRSYA+LVH+PE+ELLP LEKQAP+RAAKVAPMQSFSLGK+ KKRDGWLM+FTWL+ Sbjct: 61 HRGYIRSYAKLVHLPEDELLPILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLI 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + VV+GL+GAWWWQ+ +AQQ EI M DQSSA+LS N Q + + S P P Sbjct: 121 VLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQPVPLTDDNSDAIAPTDAPAP 180 Query: 181 PA-SVDTTATNTQTPAVTA------------------------PAPAVDPQQNAVVSPSQ 215 A TN T AVT P + P+ N+ Sbjct: 181 VANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTTLVPKTNSTEPVDT 240 Query: 216 ANVDTA--ATPAPTAATTPDGA---------APLPTDQAGVTTPVADPNALVMNFTADCW 264 AN +T A +AA +P PLPT AGV+ + ALVMNFTADCW Sbjct: 241 ANTNTTMHQEGAASAAVSPSQVPQLGMPTDQPPLPTADAGVSGSASSVGALVMNFTADCW 300 Query: 265 LEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 L+V DATGK LFSG+Q+ LNL G+APYKL IGAP A+ I YQG PVDLS+FI+ N+V Sbjct: 301 LQVVDATGKTLFSGIQKGGAVLNLAGKAPYKLTIGAPGALTISYQGNPVDLSKFIKANRV 360 Query: 325 ARLTLNAE 332 ARLT+ E Sbjct: 361 ARLTVGVE 368 >UniRef50_C4UGF5 Uncharacterized HTH-type transcriptional regulator yfgA n=2 Tax=Enterobacteriaceae RepID=C4UGF5_YERRU Length = 302 Score = 304 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 191/317 (60%), Positives = 230/317 (72%), Gaps = 18/317 (5%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 RLR ARE LGL+QQ +AERLCLKVST+RDIEED A A+LASTFLRGYIRSYA+LV +PE+ Sbjct: 2 RLRQAREALGLTQQNIAERLCLKVSTIRDIEEDNAQANLASTFLRGYIRSYAKLVRLPED 61 Query: 78 ELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 ELLP L KQAP+RAAKVAPMQSFSLGK+RKKRDGWLM+FTWL++FVV+GL+GAWWWQ+ + Sbjct: 62 ELLPMLAKQAPIRAAKVAPMQSFSLGKKRKKRDGWLMSFTWLIVFVVLGLTGAWWWQNHQ 121 Query: 138 AQQEEITTMADQSSAEL--SSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 AQQ EI MADQSSA+L S NS QG ++ N + T P T S A T A Sbjct: 122 AQQAEIANMADQSSAQLSQSENSSQGAALTDNMTNTEVPLTDSH------VAAAPVVTEA 175 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 A P + VVSPSQA++ +TPA APLPT A V+ L Sbjct: 176 TPTSTSAPTPTPSEVVSPSQASLPEVSTPA----------APLPTADAVVSGTATPAGGL 225 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 MNF+ DCWL+V DATG+ LFSG+Q+K L+L G+APYKL IGAP AV IQYQG PVDL Sbjct: 226 AMNFSEDCWLQVIDATGESLFSGIQKKGATLSLAGKAPYKLTIGAPGAVTIQYQGNPVDL 285 Query: 316 SRFIRTNQVARLTLNAE 332 S+F+++++VARLT+ AE Sbjct: 286 SKFVKSSRVARLTVGAE 302 >UniRef50_D2TXC4 DNA-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TXC4_9ENTR Length = 342 Score = 294 bits (751), Expect = 4e-78, Method: Composition-based stats. Identities = 142/342 (41%), Positives = 195/342 (57%), Gaps = 12/342 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN++ ++ E +T G RL ARE LGLS++ VAERLCLKV TVR+IEED + TF Sbjct: 1 MNSKPKTEKTE-ITVGQRLLQARETLGLSREIVAERLCLKVCTVREIEEDSNSHSVDPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYA+LV IPE+E+L L+K P +AA V+PMQS+SLGK RKKR+GWLM FTWL+ Sbjct: 60 LRGYIRSYAKLVKIPEKEILELLDKHTPAKAAVVSPMQSYSLGKTRKKREGWLMKFTWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSS------AELSSNSEQGQSVPLNTSTTTDP 174 + + I + G WWWQ K Q++EI TMA+Q+ +S G + + + Sbjct: 120 IIICIAMVGIWWWQGYKVQKQEIATMAEQNRSNAIQIPSDPPSSTAGTANAIEQNNVNTS 179 Query: 175 ATTSTPPASVDTTATNTQTPAVTAP--APAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 +T ++ P A N +PA +P + + V + S + P P + T Sbjct: 180 STETSIPPVTSAIANNVISPAPQSPLTSETLKNSDKNVNTESVNPTEVKTVPLPGSMTNN 239 Query: 233 DGAAPLPTDQAGVTTPVA---DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT 289 ++ T A + +VMNF CWLEV DA GK LFSGM+ L L Sbjct: 240 SHPERSRAEETPADTDAASLESDDGIVMNFKGQCWLEVRDAKGKILFSGMKNAGQKLELN 299 Query: 290 GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 G+ PY+ IG PA V + ++G VDL+RFI+ N+ A+ L Sbjct: 300 GEPPYEFNIGIPANVNLLFKGNSVDLNRFIKANRPAKFKLPG 341 >UniRef50_C6CAL7 Transcriptional regulator, XRE family n=1 Tax=Dickeya dadantii Ech703 RepID=C6CAL7_DICDC Length = 323 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 177/337 (52%), Positives = 222/337 (65%), Gaps = 18/337 (5%) Query: 1 MNTEATHDQNE--ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 MNTEAT D +T G RLR AREQLGL+QQ VAERLCLK++TVR+IE++ PA LA Sbjct: 1 MNTEATQDNTASTTVTPGERLRQAREQLGLTQQVVAERLCLKLTTVREIEDNNTPAGLAP 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQA-PLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TFLRGYIRSYA+LVHIPEEELLP LEK P R + VA M +LGK RKKRDGWLM FT Sbjct: 61 TFLRGYIRSYAKLVHIPEEELLPMLEKHVVPSRTSTVAAMPGTALGKTRKKRDGWLMMFT 120 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 WL+L V+GL+ AWWWQ+ +AQQ EI +M + ++A S Q +T T+DP Sbjct: 121 WLILLGVLGLTVAWWWQNHQAQQREINSMVEHANAPQSGKMVQ------DTDGTSDPEPV 174 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT-PDGAA 236 T + TA+ +V A V P+ + A AP+ A+ P + Sbjct: 175 DTEDNNAGDTASRIPETSVAAAGMPVQ--------PAAGDTSARAVVAPSQASVQPLLSP 226 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 T A PN+++M F+ADCWLEV DATGKKLFSG+QR G LNL GQ PY+L Sbjct: 227 AAVAPATATATDAAAPNSVIMRFSADCWLEVVDATGKKLFSGVQRSGGVLNLVGQPPYRL 286 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 KIGAP AVQ+++QGKPVDLSRF++++QVAR+TL+ +Q Sbjct: 287 KIGAPGAVQVEFQGKPVDLSRFVKSHQVARITLSEQQ 323 >UniRef50_D1P3Q8 Putative membrane protein n=3 Tax=Providencia RepID=D1P3Q8_9ENTR Length = 324 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 140/332 (42%), Positives = 189/332 (56%), Gaps = 12/332 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E +Q ++T G L ARE+ GL+Q+ VAERLCLKVSTV++IE+D PA + TF Sbjct: 1 MTIENNTEQT-SITVGQVLSQARERKGLTQEMVAERLCLKVSTVKEIEQDIHPAGVEPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIR YAR+V +PE E+ L+ AP + + V+PMQS+SLGK+RKKR+GWLM TWL+ Sbjct: 60 LRGYIRLYARMVGLPESEISVFLKTDAPAQVSNVSPMQSYSLGKKRKKREGWLMKITWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + ++I + G WWWQD AQ+++ TMA ++ LS Q V P T Sbjct: 120 VIILIAMVGIWWWQDHNAQKKDFITMATENDLILSQQDNSSQPVAPTNPAMIAPLATENG 179 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 QT +VT P + Q ++ + P P A T Sbjct: 180 A---------VQTSSVTGELPVLSDNQETPIAGNADAQAVRTIPLPNAPQTASSVDRAQA 230 Query: 241 DQAGVTT--PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 + + +T P A+ LV+NF+ CWLE+ DA K LFSGM+ L L G PY+L I Sbjct: 231 NASTESTDMPAANTTGLVLNFSGQCWLEIRDANNKVLFSGMKNGGDKLELDGSQPYRLNI 290 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 GAPA V +Q+QGK VDLSRFI+ + A+ TL Sbjct: 291 GAPANVAVQFQGKDVDLSRFIKAKRSAKFTLP 322 >UniRef50_B2Q0X0 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0X0_PROST Length = 314 Score = 285 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 18/330 (5%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + +Q +T G L ARE++GL+Q++VAERLCLKVSTVR+I+ED PA + TF Sbjct: 1 MTIDNNTEQTP-ITVGKLLSQARERMGLTQESVAERLCLKVSTVREIDEDVKPAGVEPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGY+R YAR+V++PE EL L+ P+ A+ V+ MQS+SLGK+RKKR+GWLM TWL+ Sbjct: 60 LRGYMRLYARMVNVPESELNALLKNDEPIAASTVSSMQSYSLGKKRKKREGWLMKLTWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + V+I + G WWWQD + QQ E TMA+Q+ +S +E G V L+ +T P TS Sbjct: 120 VIVLIAMVGIWWWQDHQKQQNEFVTMANQNDLLISQQNESGNPVELSNGSTETPTNTS-- 177 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 T T A A P ++ V P P + T + Sbjct: 178 -----ETGEGTLVDLNAAQATENQPIESLPVK---------TVPLPNSPNTTVSVDRTQS 223 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + V TPV +AL M+F CWLEV DA K L+SG++ L+L G+ PY+L IGA Sbjct: 224 TEEPVATPVV-QDALTMSFKGSCWLEVRDANNKVLYSGIKNSGDTLDLQGKLPYRLNIGA 282 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 PA V I++ G VDLSRFI+ N+ A+L + Sbjct: 283 PANVDIKFNGNVVDLSRFIKANRSAKLKIP 312 >UniRef50_C2LI02 Helix-turn-helix DNA-binding domain protein n=3 Tax=Proteus RepID=C2LI02_PROMI Length = 320 Score = 277 bits (707), Expect = 5e-73, Method: Composition-based stats. Identities = 125/331 (37%), Positives = 191/331 (57%), Gaps = 12/331 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTE ++ + LT G LR ARE+ GL+QQ VA+RLCLK++TV +IE D + +A TF Sbjct: 1 MNTENKTEEVK-LTAGQLLRQAREKAGLTQQTVADRLCLKLTTVCEIEADTISSGIAPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGY+RSYA+LV +PE +L +++QAP++ KV Q++SLGKR KKR+GWLM TW++ Sbjct: 60 LRGYMRSYAKLVGVPESAILGLIDQQAPIKQVKVTTTQNYSLGKRHKKREGWLMKLTWVI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + +I L G WWWQ +A Q+E+ +MA Q + GQ+ P + T + ++ Sbjct: 120 VIAMIALVGLWWWQGHQADQQELVSMASQ---------DIGQNSPQENTNTIESPLSTLD 170 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 S + N Q PA + V+ + + P P + T + + Sbjct: 171 NNSPSSEGENVQVPASPLVDNQANKVAEPSVTDATPEAEVKTVPLPVSPLTTSTTSRADS 230 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + T N LV+ F +CWLE+ +A K LF+G+++ L G+ PYKLKIGA Sbjct: 231 AEGNSTPAPIVENQLVLMFDGECWLEIRNAQNKVLFNGIKKAGDRLEFNGEQPYKLKIGA 290 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 P+ ++Q+ G+ VDLSRF ++A++T+ + Sbjct: 291 PSVTRLQFNGEAVDLSRFT--GKIAKITVPS 319 >UniRef50_Q1ZRE7 Hypothetical DNA-binding protein n=4 Tax=Photobacterium RepID=Q1ZRE7_PHOAS Length = 338 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 10/333 (3%) Query: 1 MNTEATHDQNEALT---TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNTE +Q G LR AREQLG SQ+ +A RL L++S + +IE ++ Sbjct: 1 MNTENNEEQKITEGTQLPGDVLRQAREQLGYSQKDIANRLRLRLSVIDNIENNRFDQAQL 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +TF RGY+RSYA+ V + EE +L L+K K MQSFS +R+ D +M T Sbjct: 61 ATFTRGYVRSYAKYVGLEEEAVLVLLDKCGH-TKPKAQEMQSFSRRTKREAHDSRIMGLT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W++ V +G++ WWWQ+ +Q + T EQG + T+ D A+ Sbjct: 120 WILAAVFVGVTAVWWWQNIHLEQAPVATTTTADQTVAHEKQEQGSDDTIVTTLNGDDASI 179 Query: 178 STPPASVDTTATNTQTPAVTAPA------PAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 S + T + P T A ++ + S T + T A Sbjct: 180 SATQPTTVDTDVDHSAPISTEQNTAASTTSADAATDSSPTTASTTATGTTTEASTTPAEN 239 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 + A+ T A L + F+ADCW++V DATGK+L SG+++ L+L G+ Sbjct: 240 AETASTSVTTATATPVVDATAPQLQLKFSADCWIDVRDATGKRLESGIKKAGQVLDLEGK 299 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 AP+++++GAP+AV+I +G+P DLSR+ + V Sbjct: 300 APFRVRLGAPSAVKINIKGQPFDLSRYPASKPV 332 >UniRef50_Q6LU50 Hypothetical DNA-binding protein n=1 Tax=Photobacterium profundum RepID=Q6LU50_PHOPR Length = 311 Score = 255 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 7/315 (2%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 LR ARE+LG SQ+ +A RL LK+S + +IE++ +TF RGY+ SYA+ V + E+ Sbjct: 1 MLRQAREKLGYSQKDIASRLRLKLSVINNIEDNIFEESQVATFTRGYVCSYAKYVGLNEK 60 Query: 78 ELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 E+L L+ + K MQSFS +R+ D +M TW V ++IGL+ AWWWQ Sbjct: 61 EILAKLDLLGHAQ-PKEQTMQSFSRRTKREAHDSRIMGITWGVAAIIIGLTAAWWWQ--- 116 Query: 138 AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVT 197 ++Q E T S+ELS ++ + + T + S A+ + T P Sbjct: 117 SEQLESGTDLSTVSSELSQPLDESIANSDLSDPTITGISASDINAAAEGTVVTASEPETV 176 Query: 198 APAPAVDPQQNAVVSPSQANVDTAATPA--PTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 A +AV + + A + + A+ + ++ A T A + L Sbjct: 177 LSATNDSDLISAVDDEVSISNPSTVINAGSDNDSFVAEQASDVISESAESTEDGAIVSDL 236 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 ++F DCW++V DA GK+L +G+++ LNL G AP+K+ +GAP V++ Y+G+PVDL Sbjct: 237 KLSFAGDCWIDVRDANGKRLDTGIKKTGDVLNLNGAAPFKVVLGAPGVVEMTYKGEPVDL 296 Query: 316 SRFIRTNQVARLTLN 330 S + +VAR L Sbjct: 297 SVY-PAGKVARFKLP 310 >UniRef50_B8K783 Integral membrane protein n=4 Tax=Vibrio RepID=B8K783_VIBPA Length = 314 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 108/327 (33%), Positives = 166/327 (50%), Gaps = 20/327 (6%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 A A+ G L+ REQLGLSQ+ +A+RL L+VS + IE ++ DL +TF +G Sbjct: 8 TAPEQTQSAVEAGTLLKQKREQLGLSQKQIADRLRLRVSIIESIESNQFTTDLVATFTKG 67 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+RSYA+ V + E E+L + + + PMQSFS +R+K D +M TW +L V Sbjct: 68 YLRSYAKAVGLDESEVLAAYAQHNKVETEE-QPMQSFSRQTKREKHDSRIMIITWGILLV 126 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 ++G+S WWWQ++++ ++T E++ + + N T PA+ P Sbjct: 127 IVGISSVWWWQNQQSSIVDLT--------EVTEQELELEQQLENAQMTELPASI-IPEVD 177 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 +T + P + P V P+ VDTA A TP + Sbjct: 178 HETELNVAEEPNLQEPVAEV---------PASETVDTAQETAQQEQVTPAEEIAEVAEPV 228 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 + P N LVM F DCW++V D +GK + +G+++ L L+G+ PYKL +GAP Sbjct: 229 EESVPQVAANLLVMTFEGDCWIQVKDKSGKTVSTGVKKAGETLELSGELPYKLVLGAPEN 288 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLN 330 V + +PVDLS + + +VAR TL Sbjct: 289 VSMTLASEPVDLSGYT-SGKVARFTLP 314 >UniRef50_Q5E773 Integral membrane protein n=3 Tax=Aliivibrio RepID=Q5E773_VIBF1 Length = 304 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 103/332 (31%), Positives = 168/332 (50%), Gaps = 29/332 (8%) Query: 1 MNTEATHDQNEA-LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M TE + E + G L+ AR++L L+ + ++ RL L+V + IE D+ +T Sbjct: 1 MTTEHIEETVETFIAPGLLLKEARKELNLTLEDISSRLRLRVEVLEQIEADQFDMGKLAT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F RGY RSYA++V++PE+++L L++ + + MQSFS +R K D +M TW+ Sbjct: 61 FTRGYYRSYAKVVNVPEQKVLDALDQLGKAQIEQ-HDMQSFSRKTKRDKHDNRIMKLTWV 119 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 + +++G+S WWWQ++ + + AEL + E +S+ TD T Sbjct: 120 IFALILGMSVLWWWQEQ-------AQLESANDAELIAEVETAKSMEQVEENKTDAPQTEE 172 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 ++D ++ + + S+A V+ Sbjct: 173 TAPTLDEAEMLQLDTNISELETDSKTLEKETIKESEAPVEIKK----------------- 215 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 + V +VM F++DCWL+V DA+ +L+SG+++ + L LTG+APYKL IG Sbjct: 216 --EEPVAEKAVVTEDVVMTFSSDCWLQVQDASNNRLYSGVKKSNQTLKLTGKAPYKLVIG 273 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 AP+AV + Y+GKPVDLS + +VARLTL Sbjct: 274 APSAVTLTYKGKPVDLSVY-PAGKVARLTLPQ 304 >UniRef50_A0KJ43 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KJ43_AERHH Length = 312 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 119/335 (35%), Positives = 166/335 (49%), Gaps = 26/335 (7%) Query: 1 MNTEATHD---QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M TE HD ++A+ G LRNAREQLG +++ VA R+ L+++ + IE D + Sbjct: 1 MTTEQPHDFQDDSQAVGPGQLLRNAREQLGWTREQVASRIHLRLTLIAAIESDTYDKHTS 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TF+RGY+R+YA+LV IPEE +L +K L MQSFS R++ D L T Sbjct: 61 HTFIRGYLRTYAKLVGIPEETILAAYDKLG-LTPPDNIDMQSFSRRSRQQANDSRLKVVT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 WLV+ V+I LS AWWWQ + S +++ T + Sbjct: 120 WLVILVLIALSVAWWWQ------------------STARRSAGDEALAATEMGATSNTPS 161 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 +T P +VD A A + DP +A + + +A T A A Sbjct: 162 ATVPPAVDVADPVVAPATSAAAATSADPVVSAAATTLPVDASSAVA---TTAVATSAATA 218 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 + A L M+FTADCWL+V DA GK LFSG+++ + L L G P K Sbjct: 219 TQPAADTAASEPAKVPQLKMSFTADCWLDVKDAKGKTLFSGLKKANDELVLEGPEPLKFI 278 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 IGAP AV I+YQGK +D+SR+ + ARL+L E Sbjct: 279 IGAPMAVNIEYQGKSIDMSRY-NNGRTARLSLPQE 312 >UniRef50_D0I7P6 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7P6_VIBHO Length = 307 Score = 252 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 8/312 (2%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE +GLS Q VA+RL L+VS ++D+EE+ + +TF RGYIRSY++LV + +E Sbjct: 3 LREAREAIGLSDQDVADRLRLRVSVIQDLEENCCDDEKVTTFTRGYIRSYSKLVGLNADE 62 Query: 79 LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 LL + + MQSFS RR + D +M TW++L +VIGL+ WWWQ++ Sbjct: 63 LLSTFNPVTDVEDST-QKMQSFSRKTRRDQHDSRVMGLTWVILAIVIGLTAFWWWQNQ-- 119 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 Q + + ++ + S +SS +E + T A T + A +T PA Sbjct: 120 QNDLLLSLPESSGLSMSSTTEAAPA----TEAAPAVAKTDDDTRQSASVAKSTDAPASAP 175 Query: 199 PAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMN 258 +P V + + D A + TPV + + ++ Sbjct: 176 DVMTREPTDTLVENTAPDVTDAEPVAAEQVDVIEPPQPEAAVVEDVAVTPVTASSNMTLS 235 Query: 259 FTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318 F+ DCW+++ DA+GK+L +G++ + L+G AP+ L +GAP AV + Y G+ VDLS + Sbjct: 236 FSGDCWVDIRDASGKRLLTGIKSSGETVELSGDAPFSLVLGAPTAVNLVYNGEQVDLSGY 295 Query: 319 IRTNQVARLTLN 330 + +VARL+L Sbjct: 296 -PSGRVARLSLP 306 >UniRef50_C9NQN4 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NQN4_9VIBR Length = 330 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 10/335 (2%) Query: 1 MNTEATH--DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 M+ E + + G L+ RE+LGL+QQ VA+RL L+ S + +IE ++ ++ + Sbjct: 1 MSVEQQTPVQEENKVEAGTILKQKREELGLTQQQVADRLRLRRSIIENIELNQFESEQVA 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 TF RGY+RSYAR+V I E +L L+ + + MQSFS ++K D +MT TW Sbjct: 61 TFTRGYLRSYARVVGIKESVVLCALDDCGEAQHEE-HEMQSFSQKTNKEKHDSRIMTLTW 119 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 + +++G+S WWWQ+++ E+TT +Q E+ E ++ L+ + Sbjct: 120 GIFAIIVGISSVWWWQNQENSAVELTTATEQ---EMKIEQELAENDELDFAAVEPSLINE 176 Query: 179 TPPAS--VDTTATNTQTPAVTAPA-PAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 +P V+ TP TA A P + Q VV + P Sbjct: 177 SPEGQQVVEQPLEEVTTPVETATAEPEIVEQPTEVVQAITEPAEPEVVTEPVTEPVVAAE 236 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 P + ++ N L M+F+ DCW++V DATGK L +G+++ +L ++G+ PY Sbjct: 237 PNQPEKETENSSEPVVANLLEMSFSDDCWIQVKDATGKTLATGIKKAGQDLQVSGERPYN 296 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +GAP V + +PVDLS + + +VAR TL Sbjct: 297 VILGAPENVSMTLSSEPVDLSGYT-SGKVARFTLP 330 >UniRef50_A6AQ33 Integral membrane protein n=14 Tax=Vibrionales RepID=A6AQ33_VIBHA Length = 318 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 101/328 (30%), Positives = 162/328 (49%), Gaps = 16/328 (4%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 E T++ ++ G L+N RE LG++Q+ VA+RL L+VS + DIE ++ +TF RG Sbjct: 5 ENTNEVPLSMEAGTLLKNKRESLGMTQKHVADRLRLRVSVIEDIENNRFEEQQVTTFTRG 64 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLR-AAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 Y+RSYA+LV + E+ +L LE+ + + + MQSFS + +K + +M TW + Sbjct: 65 YLRSYAKLVGLDEKIVLAALEQTSEVHVKPQETEMQSFSRKTKHEKHNSRIMLLTWAIAI 124 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 V+ G+SGAWWWQ+++ + S A+LS+ + + + V + A Sbjct: 125 VITGISGAWWWQNQQ----------ENSLAQLSAETAETEQVADDADIDQMSADELIAST 174 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + + V+ + + A V A P A A P Sbjct: 175 PAEIAPASAALTVVSEADTTMSAAGDVTEPVVAAEVTEEAAQEPVAVIEDAQEAEEP--- 231 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 L M F ADCW++V DA GK L SG ++ ++ L G+AP+K+ +GAP Sbjct: 232 -AAPVVPEGMTLLTMKFKADCWIQVKDANGKTLVSGTRKPGQDVELAGKAPFKVILGAPE 290 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V + + +PVDLS + + +VAR TL Sbjct: 291 GVTMTFASEPVDLSGYT-SGKVARFTLP 317 >UniRef50_C4LC36 Transcriptional regulator, XRE family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LC36_TOLAT Length = 343 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 161/345 (46%), Gaps = 20/345 (5%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M TE H+ + LT G L+ AREQ GLSQQ VA RL L++S +RDIEED+ ASTF Sbjct: 1 MTTEQRHETAQ-LTPGTILKTAREQRGLSQQDVAHRLNLRISLIRDIEEDRFDQKTASTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+++YAR V EE ++ + L K + M SFS +R+ + + +W++ Sbjct: 60 TRGYLKTYARFVGANEEAVVAAYDGLG-LDDKKYSEMYSFSGRTQREASEHRVRLISWVL 118 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +IGL G WWW + +E + T +++ +L + ++ +N ++ T + Sbjct: 119 CIGLIGLGGTWWWL--QPTEEPVPTSINEA-GQLVVKAVNEAALAVNPVSSATSVATESL 175 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA----------- 229 P NT + AV A A + +P+ A + Sbjct: 176 PVPTIPDVMNTSSSAVPASADVAEENDTEGQAPTVLTDTAVDAEAQEQSAVVPAPMVAAV 235 Query: 230 ----TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 A V AL + F CWL VTDATGK + G + Sbjct: 236 AATSAAASTAVSTAASTEETAVAVDPSVALQLQFKETCWLRVTDATGKSILEGTKNAGDK 295 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++L+G+ P+ L IGAP AV I + G+ VD+S +IR VAR L Sbjct: 296 ISLSGKEPFSLTIGAPRAVSIYFHGQEVDMSSYIRQGVVARYKLP 340 >UniRef50_C9P6C4 Putative uncharacterized protein n=2 Tax=Vibrio RepID=C9P6C4_VIBME Length = 303 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 106/333 (31%), Positives = 170/333 (51%), Gaps = 33/333 (9%) Query: 1 MNTEAT---HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT+ + G L+ RE LGLSQ+ VA+RL L+V+ +R+IE+++ +DL Sbjct: 1 MNTQQETIVEETPNVQQPGTLLKQKRETLGLSQKQVADRLRLRVAIIRNIEDNQFDSDLV 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +TF RGY+RSYA+ V + E++ E + + MQSFS +R + D +M T Sbjct: 61 ATFTRGYLRSYAKAVGLSVAEVVESYEVHY-VTGPQEQRMQSFSRKNKRAQHDSRIMLIT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W+++ V+IG+S WWWQ+ + +T+ +++SS + Q S + DP Sbjct: 120 WVIVLVIIGMSSLWWWQNNQHNN--LTSSSERSSLITEQTNPQ--------SASADPILD 169 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 P +V + AV P ++ V P A P+ T ATT + Sbjct: 170 QLP--TVSDLTVGNEVSAVEQAEEEESPVNDSRVEPI-----LEAEPSITPATTENTPVN 222 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 + N L M F+ADCW++V DATGK L +G+++ ++N+ G+ P + Sbjct: 223 AD-----------ESNLLSMTFSADCWIQVKDATGKTLSTGVKKAGQSINVRGETPISVI 271 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +GAP V + + +PVDLS + + +VAR TL Sbjct: 272 LGAPEGVSVTFASEPVDLSGYT-SGRVARFTLP 303 >UniRef50_B0TLI3 Putative uncharacterized protein n=2 Tax=Shewanella RepID=B0TLI3_SHEHH Length = 327 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 103/339 (30%), Positives = 165/339 (48%), Gaps = 25/339 (7%) Query: 1 MNTEATHDQN---------EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK 51 M E + N LT G L+ ARE GLS +A+A +L L+ + +++IE D Sbjct: 1 MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADN 60 Query: 52 APADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG 111 A A+T++RGY+++YAR V + L+KQ L + + MQSFS + RDG Sbjct: 61 LQAVGAATYVRGYVKNYARAVQADPFTVQECLDKQ--LESEEKPSMQSFSRKTTHQARDG 118 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 LM T++++FV++GL WW+Q ++M + E S + + Sbjct: 119 RLMALTYIIVFVLLGLMVLWWFQK--------SSMDSAVDYSQPTAEEVAASAEVGLANP 170 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 D + V+ A++++ PA + AV Q+A + S T +PA T AT Sbjct: 171 IDALLVDNSDSGVEQMASSSEEPAES----AVSTAQDAPTAASNEQSQTTQSPAATQATE 226 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 P P A V + L ++ T DCW++VTD G L S +++ +NL G Sbjct: 227 PAQIEPNAQASAESEDKVL-GSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGA 285 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P+ + +GAP V IQ GK + L ++ + +VA++TL Sbjct: 286 EPFSVTLGAPQVVNIQLNGKSISLDQY-PSGKVAKMTLP 323 >UniRef50_B8CKR0 DNA-binding protein, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKR0_SHEPW Length = 336 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 8/330 (2%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 ++TE+ D+ LT G L+ ARE G S + +A +L L+ + +R+IE D A+T+ Sbjct: 11 IDTESLVDE-PTLTLGVLLKKARENKGASVEDIAAQLHLRPAIIREIEADNLLEIGAATY 69 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +RGY+++YAR V E+ L+KQ L + MQSFS + RDG LM T+++ Sbjct: 70 VRGYVKNYARAVQADPFEVQTCLDKQ--LLNDEQPSMQSFSRKTTHQARDGRLMALTYII 127 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +FV++ L WW+Q + + S+ +N+ + + P Sbjct: 128 VFVLLALMVLWWFQKSSMETTVDYSQPTVEEVAASAEEAMYDESLINSEAALAAQSNNIP 187 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 +D T V + S+ + A + + A + Sbjct: 188 ---LDERIVETIGDDVADNNSTEQYIASNQDVTSEEQPELQVAEASSQVSAAQLLASM-V 243 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 D T A +AL++ + DCW++VTDA G L G+++ ++N+TG P+ + +GA Sbjct: 244 DSQDNDTSDAVTSALMLTLSGDCWIKVTDANGNTLIDGLKKSGRDINVTGAEPFAVILGA 303 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P V IQ G V L ++ + +VAR +L Sbjct: 304 PQVVNIQLNGTQVSLDQY-PSGKVARFSLP 332 >UniRef50_Q3ICZ4 Putative transcriptional regulator, HTH domain n=2 Tax=Alteromonadales RepID=Q3ICZ4_PSEHT Length = 287 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 46/333 (13%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN E T Q+E + G L+ RE +S +A L L V V+ +E D+ +TF Sbjct: 1 MNEEITQPQSEQPSLGQILKTHRENADISLATMATHLKLTVLQVQRMENDEYQLLGPTTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++GYI++Y R + I +L L AP K MQSFS ++ D LM ++++ Sbjct: 61 VKGYIKNYCRELKIDHTPILAMLP--APTTPEKPVDMQSFSRRTEKEANDSRLMIASYII 118 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L +VIG S WWWQ+ +E+ + + ++S +S EQ Sbjct: 119 LAIVIGSSALWWWQNSMPIEEQTSNINVENSI-MSEQQEQA------------------- 158 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A + A+ Q + A Q +A+ PS + T AP A Sbjct: 159 -AQSNIGASQQQVQEINNVALPQSEQLSAL--PSGNSTINTTTTAPNEAN---------- 205 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + + +VM F + W+E+ DA G+K+ G+++ + LTG AP+ + +G Sbjct: 206 ----------NSSTIVMLFNDESWVEIYDAEGEKIAFGVKKAGYEMTLTGIAPFSVVLGK 255 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 AV I G+ VDLS F + N++A+ L + Sbjct: 256 HDAVNITLNGETVDLSAFPK-NRLAKFKLPLAE 287 >UniRef50_A1S864 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S864_SHEAM Length = 340 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 166/348 (47%), Gaps = 29/348 (8%) Query: 1 MNTEAT-----HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 MN E T + + G L+ ARE G+S VA L L+ S V+D+E D Sbjct: 1 MNEELTPSSEEQEAPATESLGQILKAAREAKGMSVADVATALHLRPSVVKDLEADDFSNI 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 ++T++RGYI+++AR+V ++++ L Q P + MQSFS R+ RD + Sbjct: 61 SSATYIRGYIKNFARIVEADKQKVEACLASQVPGVSQPA--MQSFSRKTVRQARDKRYLM 118 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQ----------GQSVP 165 T+LV+ +++ L WW Q K + ++ E+++ + G Sbjct: 119 LTYLVILILVALLVFWWLQTSKFFNTAAVDFSKPTAEEVAAAGQTSIQDDLMQRLGNETH 178 Query: 166 LNTSTTTDPATTSTPPASVDTTATNTQTPAVT---APAPAVDPQQNAVVSPSQANVDTAA 222 T+ P T + SV++ VT A P+ N+ V + +++ Sbjct: 179 TQAGTSPQPDTEAAYEQSVNSDDMPVAAQEVTVGSAEEPSAQQDNNSAVDTTASDMREID 238 Query: 223 TPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRK 282 T A A TP+ A +P +ALVM+F+ADCW++V DATGK L S +++ Sbjct: 239 TRASNAEATPEVTASIPATP--------GQSALVMSFSADCWVQVKDATGKVLVSDLRKA 290 Query: 283 DGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +NL+G+AP+ +GAP AV++ G+ L F + +VAR +L Sbjct: 291 GQTINLSGKAPFSFILGAPQAVKLSINGEAASLDEFPK-GRVARFSLP 337 >UniRef50_A4C7F7 Putative transcriptional regulator, HTH domain n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C7F7_9GAMM Length = 315 Score = 223 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 81/333 (24%), Positives = 152/333 (45%), Gaps = 23/333 (6%) Query: 3 TEATHDQNEALTT--GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 E T + E G+ L RE +S A+RL L + + ++E ++ +TF Sbjct: 4 QEVTDNTVETPLPLVGSFLTAGREAAKISVDEFAKRLNLSAAQLTNLESNQFALLGPATF 63 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++GYI+SY + + + E +L + Q ++ MQSFS ++ D LM F++ V Sbjct: 64 VKGYIKSYCKFLSLDESYVLSLYDAQT--EGPTISKMQSFSRRTEKEAHDNRLMLFSYAV 121 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L +VIGLS WWWQ+R TT A +S E+ + +Q SV S P Sbjct: 122 LSLVIGLSVLWWWQNRD------TTPAPIASPEIQNVEQQSVSVVAQDSLQKQPVQNQDA 175 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 +++ + T + + +P V+ A Sbjct: 176 QLGLNSEQITNELSEQTQ-------VEQSEQTPESTQVEQELNEATQVIEPVVAVIKKND 228 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 QA + N +VM F D W+E+ D++ ++ G+++ + + G+AP+ + +G Sbjct: 229 KQANNSL-----NKVVMYFNNDSWVEIFDSSAARVAFGVKKAGYTMTVEGKAPFAVVVGK 283 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 P V++++ G+ +D+S+F ++++A+ +L + Sbjct: 284 PHLVEVEFDGEQIDMSKF-PSHRLAKFSLPLTE 315 >UniRef50_Q085U7 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085U7_SHEFN Length = 325 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 86/321 (26%), Positives = 136/321 (42%), Gaps = 16/321 (4%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 + +T GA L+ ARE GLS + VA +L L+ + D+E D ++T++RGYI++YA Sbjct: 18 KDVVTAGAILKAAREAKGLSLETVATQLHLRPKIINDLENDIFVNIASTTYVRGYIKNYA 77 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 R+V+ ++ L Q P A MQSFS + R+ L T+L++ V+I + Sbjct: 78 RVVNADINQIQQCLSHQLPEIVAPA--MQSFSRKTTHQARNSRLNLVTYLIVAVLIAMLV 135 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 WW Q + SN + Q + + S + Sbjct: 136 LWWVQKSSLLTNIDLSQPTVEEIAAESNMPEPQQIIRSGSVQSSGNGLDNEGN------- 188 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 V+A A A Q D A A++ + + + T+ Sbjct: 189 ------VSATDVANQAAIEAEDKLIQTAQDAATASQSLPASSVVESTNIVSSSTADTSLA 242 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 + L + T DCW+ VTDA GK + G++ + + G P+K+ +GAP I Sbjct: 243 GAESVLTIELTGDCWVNVTDANGKVMVDGVKNAAQRIEVRGIKPFKVILGAPQVASISLD 302 Query: 310 GKPVDLSRFIRTNQVARLTLN 330 G V L+ F +VARLTL Sbjct: 303 GNNVSLAEFA-NGRVARLTLP 322 >UniRef50_B4RV90 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RV90_ALTMD Length = 350 Score = 220 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 15/343 (4%) Query: 2 NTEATHDQNE-ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 N E T Q E + GA L+ RE LGLSQQ +A++L LK + D+E D + TF Sbjct: 8 NQEVTSQQQENTPSPGAMLKARRETLGLSQQDIADKLFLKSFQINDLESDVIDERSSVTF 67 Query: 61 LRGYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 +GY+R+YA+ + + E++ E+ +QSFS ++ D M T++ Sbjct: 68 TKGYVRNYAKQLGMNSHEVIEAFERFHNQTSVPSSEKLQSFSKRVAKQTHDDRWMMVTYI 127 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQ-----SSAELSSNSEQGQSVPLNTSTTTDP 174 +L ++I WW+Q + + + ++ +SS S ++D Sbjct: 128 ILLLIIAGVVVWWYQQPNDESVAELPLTEAVKRETANTPISSTERGTSSSQAEKRISSDN 187 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 + DT + + + PQ + N + P T + + Sbjct: 188 TASQASTLGNDTLTSRSAEVGESQSGEDTGPQDDDFAQDGSLNDGAISAPDTTVDDSNNL 247 Query: 235 AAPLPTDQAG-------VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN 287 A + D T A P ++ F DCW+ + DA+G+ + G+++K + Sbjct: 248 TALVSGDNEVQQSSLKINTQSSAAPISMTFTFDDDCWVNIKDASGEAIAYGVKQKGRVME 307 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + G P ++ +GAP V+I G+ VD+S + + + AR L Sbjct: 308 IQGVPPVEVTLGAPDNVRISVNGESVDISSY-QNGKTARFALP 349 >UniRef50_A6FA10 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FA10_9GAMM Length = 327 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 93/326 (28%), Positives = 154/326 (47%), Gaps = 25/326 (7%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + +T G L++AR G+S Q V + LK+S + +IE+ A ++STF+RGYIR YAR Sbjct: 22 DVVTAGQMLQDARIASGISVQEVCNHIHLKLSVINNIEQSVADKQISSTFMRGYIRCYAR 81 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + I E+E++ + Q + + +QSFS + + D LM ++ ++ ++ + Sbjct: 82 YLKISEDEVITAYDGQN-VACEQQTELQSFSCRTKLEAHDNRLMLVSYGIIGFMLAVFLI 140 Query: 131 WWWQDRKAQQ----EEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 W D E I T +S ++ EQ V P ST S + Sbjct: 141 WGLGDDVDVDVVVPEPIITQTIESVGAVTVIEEQAPLV-----VAESPEFDSTEFESTEL 195 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 +T QTPA+ AP ++ V P++ A P T+ Sbjct: 196 DSTVAQTPALDVIAPP-----SSEVVPAEVLAHVTALPTITSPV---------VTNTPDN 241 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 P +LV+ F DCW++V D GK L +G+++ +++L G AP +K+GAP V + Sbjct: 242 KPAIVAQSLVLTFAGDCWIQVKDKNGKTLSTGVRKAGQSISLQGLAPLSIKLGAPEYVTM 301 Query: 307 QYQGKPVDLSRFIRTNQVARLTLNAE 332 Y G+ VDLS F + ++A+ + E Sbjct: 302 SYAGESVDLSTF-KQGKLAKFKVPFE 326 >UniRef50_Q12PT5 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12PT5_SHEDO Length = 364 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 104/356 (29%), Positives = 166/356 (46%), Gaps = 30/356 (8%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 TE ++ T GA LR ARE GLS Q VA +L L+ S + DIE DK A ++T++ Sbjct: 10 TTEQVDPSSDITTVGAVLRKARESKGLSIQEVALQLHLRPSVIVDIENDKFDAMSSATYV 69 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RGY+++YAR V E + L +Q P A MQSFS ++ RD L+ FT++++ Sbjct: 70 RGYVKNYARFVAADIELIKTCLTQQLPQEAP--PSMQSFSRKTTKQARDKRLLIFTYIIV 127 Query: 122 FVVIGLSGAWWWQD---------RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT 172 ++ L WW Q + EE+ + + E S++ +P T+ Sbjct: 128 STLLALLVLWWVQKSTLLSDVDVSQPSMEEVAATEQEHALEAFEISQRALPLPDLPLVTS 187 Query: 173 DPATTSTPPASV--------DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT- 223 D + + V DT T VT P + Q V P AT Sbjct: 188 DADSVTESGTEVNKGAESDLDTNTTALSGGTVTTENPLIQGQSLESVMPEAGIASLPATG 247 Query: 224 --------PAPTAATTPDGAAPLPTD-QAGVTTPVADPNALVMNFTADCWLEVTDATGKK 274 + + + A PL +D + +A+ + L + T D W++V D+TGK Sbjct: 248 NTALVENSVSNSVSNNEAQAKPLISDVEQSSVASLAEGDRLSVELTGDSWMKVVDSTGKV 307 Query: 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 L G++ + ++G+AP+ L +GAP V + + G+ VDLS+++ +VAR T+ Sbjct: 308 LIDGVKTPGRTIAVSGKAPFSLILGAPKFVSLSFNGEQVDLSQYL-DGRVARFTIP 362 >UniRef50_B1KKJ1 Putative uncharacterized protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKJ1_SHEWM Length = 340 Score = 218 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 13/333 (3%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 ++ T D +E +T G+ L+ ARE+ G S +A +L L+ V DIE D ++ ++ Sbjct: 14 DSNETPDISEQMTLGSLLKAAREEQGASIGDIAGQLHLRPCIVEDIEADNFGDIASAIYV 73 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 +GY+++YAR+V + + L+ Q P A MQSFS R+ RDG LM T+L+ Sbjct: 74 KGYVKNYARIVQADAQAIQACLDIQLP--KASAPEMQSFSRKTTRQARDGRLMFVTYLIA 131 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA---TTS 178 F+++ L Q+ + D S + +E Q P +T DP + Sbjct: 132 FILLALL-----VLWWVQKSDTQASVDFSKPTMEEMAESIQE-PFSTKALPDPTLERDSG 185 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP-DGAAP 237 + ++++ T + V +SP NV+++ +T + Sbjct: 186 IESSGIESSDTGLSINNSAINSGVVHSNDIDDLSPETVNVESSDLATTVVSTEQLPVSVQ 245 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 Q + + L ++ ADCW+ V DA GK L + +++ L + G+ P+KL Sbjct: 246 SEIVQDLPSVDSLGASRLSLSLVADCWINVKDADGKVLINDLKKAGSLLEVKGREPFKLT 305 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +GAP AV I+ + + L+ + +VAR +L Sbjct: 306 LGAPQAVTIKLNEESISLADYA-NGRVARFSLP 337 >UniRef50_A3QCG1 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QCG1_SHELP Length = 336 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 98/334 (29%), Positives = 164/334 (49%), Gaps = 19/334 (5%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 +A + T G L+ ARE ++ +VAE+L L+ S V+D+E D ++T+++G Sbjct: 12 DAEKPKEAGETLGQWLKAARESRQMTLASVAEQLNLRPSIVQDLEADNYDNIASATYVKG 71 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+++YAR++ + ++ L + P+ +A MQSFS R+ RDG LM T+L++FV Sbjct: 72 YVKNYARILGLEMAKVDAYLAESFPVVSAPT--MQSFSRKTTRQARDGRLMLVTYLIIFV 129 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 + A + +LS S + + +++P P A Sbjct: 130 ----------LLALLVLWWVQKSAMVADLDLSKPSVEETAELSTLPASSEPMLAQDPQAG 179 Query: 184 VDTTAT-NTQTPAVTAPAPAVDPQQNAVVSPS-QANVDTAATPAPTAATTPDGAAPLP-- 239 P T AV Q A S S Q + A AP A +TP+ L Sbjct: 180 TGIEMPREQAAPDQTVSDQAVPDQTMAEESTSAQLTGEQAEDLAPEAGSTPETGVALEVT 239 Query: 240 --TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 QA AD L ++ + DCW++VTDA GK L +G++ +N+ GQAP+K+ Sbjct: 240 NQNSQADEALKSADDAVLALSLSGDCWIKVTDADGKVLVNGLKLAGKEMNVFGQAPFKVI 299 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 +GAP ++ ++ G+ VDL+++ + +VARLT+ + Sbjct: 300 LGAPQSLTMRLNGEQVDLAKY-PSGRVARLTVGS 332 >UniRef50_Q0HKW0 Putative uncharacterized protein n=11 Tax=Shewanella RepID=Q0HKW0_SHESM Length = 380 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 43/365 (11%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 + +T G LR AREQ+GLS A +L L+ V ++E D +ST++RGY+++ Sbjct: 19 ESTPDVTLGTVLRTAREQMGLSIADTAVKLHLRPGIVENLEADDFSNISSSTYVRGYVKN 78 Query: 68 YARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 YAR++ + + L +Q PL MQSFS + RD L ++ ++ V++GL Sbjct: 79 YARMLGVDNALIEACLTRQVPLVTQPA--MQSFSRKTTYQARDTKLKWLSFFIVIVLLGL 136 Query: 128 SGAWWWQD---------RKAQQEEIT----TMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 WW Q K EE+ T+ + SE+ + +N S TD Sbjct: 137 FVLWWMQRTTLVTHVDISKPTAEELAAANQTLPGDVLLTETDASERLSEIAVNGSMATDG 196 Query: 175 ATTSTPPASVDTTATN-------------------------TQTPAVTAPAPAVDPQQNA 209 T +++D + T + TAP A + Sbjct: 197 PVKDTDASTIDPNMNDSAAMEAEQTSAANSAMNASESSTALTNNASNTAPNTASTSGASN 256 Query: 210 VVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP-NALVMNFTADCWLEVT 268 +V+ A + A AP T T PVA +++ + T DCW+ + Sbjct: 257 IVAVPNATQNGATNTAPVQNQTASNTPATNTASTAQAMPVAAGQSSITIELTGDCWINIV 316 Query: 269 DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARL 327 DA GK + G++ N+ +G P+K+ +GAP V GK + L+ F + +VARL Sbjct: 317 DAKGKAIVDGVRGAGANIQASGVPPFKVILGAPTVVSTFTVDGKAISLAEFPK-GRVARL 375 Query: 328 TLNAE 332 T+ Sbjct: 376 TIPQV 380 >UniRef50_A6ADB9 Integral membrane protein (Fragment) n=34 Tax=Vibrio RepID=A6ADB9_VIBCH Length = 325 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 23/315 (7%) Query: 3 TEATHDQNEA----LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 TE T N+ + G L+ RE LGL+Q+ +A+RL L++S ++ IEE++ + Sbjct: 11 TETTEQLNQPAIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVA 70 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 TF RGY+RSYA+ V I E E+L + + M+SFS +R+ D +M TW Sbjct: 71 TFTRGYLRSYAKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITW 130 Query: 119 LVLFVVIGLSGAWWWQDRKAQQ--EEITTMADQSSAELSSNSEQ-------GQSVPLNTS 169 ++L V++G+S WWWQ+ + + TT+A + +++ S+++ PLN Sbjct: 131 VILAVIVGMSTLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDTSLANEDFATVPPLNEL 190 Query: 170 TTTDPATTSTPPA-------SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDT-- 220 PA+ P + + + T V P V+ A V+P+Q T Sbjct: 191 QDAAPASEEAPMSQESLSGEASELTPPAPNEADVVTDKPVVEETATAPVAPAQPQGQTPV 250 Query: 221 -AATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGM 279 + P A T AAP Q ++ + LVMNF+ADCW++V DATGK L +G+ Sbjct: 251 QSQAPVAAAPVTQPEAAPSAPSQPVSSSTESASALLVMNFSADCWIQVKDATGKTLSTGV 310 Query: 280 QRKDGNLNLTGQAPY 294 ++ +++L+GQ PY Sbjct: 311 KKAGQSVSLSGQRPY 325 >UniRef50_UPI0000E0F4D9 hypothetical protein GHTCC_02974 n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F4D9 Length = 376 Score = 213 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 50/378 (13%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 TE++ + + G L AR LS VA+RLCLKV+ + +E+D+ ++ TF++ Sbjct: 2 TESSQMETPLDSPGLLLAEARRAKQLSTDDVAKRLCLKVNIIEALEKDELLPSISLTFIK 61 Query: 63 GYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 GY RSYA+L+ + E ++ A MQSFS ++ D M T+ ++ Sbjct: 62 GYTRSYAKLLGLDEVHIITLFNDFHASETLIAPKKMQSFSRKVAKENNDSRWMLVTYSLI 121 Query: 122 FVVIGLSGAWWWQDRKAQ-----QEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 VV+ L WW Q + ++ ++S +EQ Q+ S + T Sbjct: 122 AVVLILIVIWWSQQNSENFFASPSSVPALNSSEADLPVASTTEQLQNTSTIPSNLNEKQT 181 Query: 177 TSTPPASVDTTATN-----------------------TQTPAVTAPAPAVDPQQNAVVSP 213 T++ SVD+ ++N T+T ++ P+ A+ +QN + Sbjct: 182 TNSLD-SVDSISSNGDLAGNLPEESILTESLLTETLPTETSSLEEPSVAMLTEQNNSLES 240 Query: 214 S------------------QANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 + Q N+ A + L D + V + L Sbjct: 241 NDLNQVEQETIPDFVPDKVQGNIAQVLDLLENDAPDVESELRLFDDDMSASNDV-EIVEL 299 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 + F+ DCW+++TDATG + G++++ + ++GQ P+ + +GAPA+V++ Y G+PVD+ Sbjct: 300 MFTFSNDCWIKITDATGNDIAYGVKKQGRVMPVSGQPPFSVILGAPASVKVNYAGEPVDI 359 Query: 316 SRFIRTNQVARLTLNAEQ 333 S F+ +++ R L ++ Sbjct: 360 S-FLPSDRTGRFVLPLQE 376 >UniRef50_C9R6E7 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=C9R6E7_AGGAD Length = 351 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 22/349 (6%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAP-ADLASTF 60 +E + T G + R ARE L L+ + V++ + L+ + VR IE ++ + +TF Sbjct: 6 TSETQSRNEQQTTLGDKFRLAREALNLTPEQVSKEISLRPALVRLIENNQFTNETIPATF 65 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +RGY+RSYA+ + IP+ E + + + ++ + + W+ + LV Sbjct: 66 MRGYVRSYAKFLRIPDSEWMNVIHFGNEQKNDLGKNARATRSVNQYSSHNNWIGYLSALV 125 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQ----------SVPLNTST 170 + +V+G++G WWW+ + E + + + +E VP T+ Sbjct: 126 ILIVVGMTGMWWWESHQQSNAERDVLVNSYTPSAPVTTEVNTAPAKPAGNEIPVPQPTAK 185 Query: 171 TTDPATTSTPPAS--VDTTATNTQTPAVTAPAPAVDPQQNA------VVSPSQANVDTAA 222 + T + P + T T+TP V + NA V+ P + + Sbjct: 186 IENTLTDTAPKGTGIEIETKPLTETPVAANTTAPVAQESNAPIASANVLQPKMNKIGSNE 245 Query: 223 TPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRK 282 + A P + + V + L + +CW+ V D K L ++ Sbjct: 246 QLTSVQPESQASAEPQSAVENSSVSAVTTKDNLYIEVIGNCWISVKDKNRKVLAQKEYKQ 305 Query: 283 DGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 L+ + PY L IGAP V+I Y+G+ L +VA+ L Sbjct: 306 GDVLSFNEEEPYSLIIGAPGNVRITYKGQAFPL---TVDGRVAKFKLPQ 351 >UniRef50_B9CX69 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=B9CX69_9PAST Length = 334 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 148/343 (43%), Gaps = 19/343 (5%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLAST 59 M L+ G +L++ARE L LS + VA++ LK S + +E D ++A T Sbjct: 1 MTESINTTSQPTLSLGQQLKSAREALNLSIEDVAQKTNLKKSHLESLENDIFILQNVAPT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F+RGY+R+Y R + +PEE + + K ++ S +K ++ W+ T Sbjct: 61 FVRGYVRNYVRFLRLPEELVSSV--NYGEVTIPKEIVHKTSSEKVVQKSQNQWVKYLTIF 118 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 VL IG++ WWWQD +A+Q+ + + ++ + + PATT+T Sbjct: 119 VLLGAIGMTLLWWWQDYQAEQQNRDQFVNNAIPVEATPTPANTNQATQVEPIIQPATTNT 178 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 +T A + PA P Q++ +P+ + A PAP A Sbjct: 179 ETVVANTAAPANEQPA----QPVAQVAQSSETAPTPTTQELATQPAPVATEVAPQIESAN 234 Query: 240 TDQAGVTTPV-------ADPNALVMNFTA-DCWLEVTDATGKK-LFSGMQRKDGNLNLTG 290 Q T PV + L + T + W+ V + KK L + L G Sbjct: 235 VLQQTQTNPVETEQPAAVSNDELRIEITGKESWITVKNTKSKKSLAEKLYTNGEVLAFNG 294 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 Y+L IGAPA V++ Y+G+ V L +VAR+ L Q Sbjct: 295 NEQYRLTIGAPANVKLYYKGQLVPLKI---DGRVARIKLPLAQ 334 >UniRef50_Q5QYA8 Predicted transcriptional regulator, contains N-terminal xre-type HTH domain n=1 Tax=Idiomarina loihiensis RepID=Q5QYA8_IDILO Length = 365 Score = 210 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 22/348 (6%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 +Q + G LR ARE GL Q+ VA++L L+ + +E D +TF++GY Sbjct: 20 QETEQKPSKGPGEILREAREAKGLEQREVADQLRLRKQIIELLEADDYSTFSTATFIKGY 79 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +RSYA+L+ + + EL + + + + + MQSFS K+ ++ D LM V+ ++ Sbjct: 80 LRSYAKLLDLDDTELFEAYKARG-YKEVESSQMQSFSRRKKHEESDNRLM-LITYVVIII 137 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP--- 181 + WWWQ+ E T +SS N++ + + P P Sbjct: 138 VVALVIWWWQEPDLGFSEGETGTQESSEVSPVNTDDEADNVGDIEISNQPTEPQIAPNED 197 Query: 182 -----ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ-ANVDTAATPAPTAATTPDGA 235 + V+ TN +V P N SQ AN D+AA P Sbjct: 198 EAILESEVEADDTNVAVESVQEPVSESGENDNENNDESQAANTDSAANDVNDTQELPTET 257 Query: 236 APLPTDQAGVT----------TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 A +QA + P A +LV+ F +CW+++ DA+G+ G++ Sbjct: 258 AEQTDNQAETSVESEAVEPSPQPEAVSASLVLEFNEECWVKIDDASGETQAVGVKAAGYR 317 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 + + G+AP+ + + P AV + + G ++ +F RT +VAR T+ +E+ Sbjct: 318 MPVPGEAPFSVTLCKPEAVNVSFNGNAFNMDQF-RTGRVARFTVPSEE 364 >UniRef50_C6AJL0 Putative uncharacterized protein n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AJL0_AGGAN Length = 341 Score = 210 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 145/344 (42%), Gaps = 16/344 (4%) Query: 1 MNTEATHDQNEA----LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PAD 55 MNT+ T + + + G + R ARE L L+ + V++ + L+ + +R IE ++ Sbjct: 1 MNTQTTSQEPQTNTRETSLGDKFRQAREALNLTVEQVSKEISLRPAVLRSIENNQFISDT 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 + STF+RGY+RSYA+ + IP+ + + + + ++ + + W+ Sbjct: 61 IPSTFMRGYVRSYAKFLKIPDSDWVNTINFGHVQKNDLGKNARATRAVNQYSSHNNWVGY 120 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMAD---QSSAELSSNSEQGQSVPLNTSTTT 172 + +V+ +V+G++G WWW+ + E + + S AE +++ V + T Sbjct: 121 LSVIVVLIVVGMTGMWWWESHQQSNVERDILVNTYTNSVAETTTSKPITNEVVVPQPTKI 180 Query: 173 DPATTSTPPASVDT-----TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPT 227 + T T P + Q + P+ + N + S Sbjct: 181 ENTLTDTAPKGTNIEIETKPLVEPQIAGSSTPSESTQSSGNVLQSEMNKISGNEQLSMTQ 240 Query: 228 AATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN 287 AT G + + V+T A + L + +CW+ V D K L ++ L+ Sbjct: 241 TATQASGEQQSAVENSNVSTADASKDNLHIEVIGNCWISVKDKNRKVLAQKEYKQGDVLS 300 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + PY L IGAP V+I Y+G+ L +VA+ L Sbjct: 301 FNEEEPYSLIIGAPGNVRITYKGEAFPL---TVDGRVAKFKLPQ 341 >UniRef50_Q47WB9 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WB9_COLP3 Length = 330 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 78/330 (23%), Positives = 153/330 (46%), Gaps = 23/330 (6%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 +D E L+ GA L AR+ L LSQ+ ++ +L LKV+ V++IE+D + TF RG Sbjct: 24 TELNDYIEVLSPGAMLSEARKALSLSQEFISSKLNLKVALVQNIEDDIFDPSMPVTFNRG 83 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+ +YA+LV + +E+L + + + M SFS ++ +M ++L++ V Sbjct: 84 YLANYAKLVGVEVKEVLASYDALDAATIQR-SEMLSFSKETSKQAEHSRVMWLSYLIVAV 142 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 ++GL+ WW Q+ + Q ++ + M ++ + + + + +S + A + A Sbjct: 143 LVGLTVLWWLQESRQQADDSSNMIPNTAPAENVSGDVVTTNIEPSSLAIETAPVNDN-AQ 201 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + + T+ ++ N + + + V+ + PA Sbjct: 202 LSEKKDEIELALDTSTKALINDANNDLKASANIVVNDVSQPA------------------ 243 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 VA + V F DCW+ + DATG+++ G+++ + + G+AP + +G P Sbjct: 244 --EPEVAAISTAVFTFKGDCWVNIYDATGERIAWGVKKSGYVMTVQGKAPLSITVGKPEL 301 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 I + +PVD+S F +A+ L + Sbjct: 302 ASIVFNDQPVDMSAF-NVGNIAKFNLPIVE 330 >UniRef50_A3N1H9 Putative uncharacterized protein n=4 Tax=Pasteurellaceae RepID=A3N1H9_ACTP2 Length = 322 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 90/339 (26%), Positives = 145/339 (42%), Gaps = 26/339 (7%) Query: 3 TEATH--DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLAST 59 TE+TH +N+ + G +L+ ARE L LS + VA++ LK S + +E D ++A T Sbjct: 2 TESTHPMQENQDIPLGQKLKQAREALHLSIEDVAKKTNLKKSHIESLENDIFILQNVAPT 61 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F+RGY+R+Y R + +PE + +++ S +K + W+ T L Sbjct: 62 FVRGYVRNYLRFLRLPEALVSTV---NYGEVIIPKDAIKTPSPKVVQKSQTKWVKYLTIL 118 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP---AT 176 VL +G++ WWWQD + +QE + S E ++ T + P A Sbjct: 119 VLLGAVGMTLLWWWQDYQKEQESREHIVSSSVVEPTATQATAPITAPVVETPSAPVAVAP 178 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 P + T+ T+ A+ A PQ + + V+ PA A AA Sbjct: 179 VMETPKAETTSPMPTENNALNTAAATEQPQVSVTPEATTEAVNVLQQPAIEPAAEQSQAA 238 Query: 237 PLPTDQAGVTTPVADPNALVMNFTA-DCWLEVTDATGKK-LFSGMQRKDGNLNLTGQAPY 294 + + L + T + W+ V + KK L + L G Y Sbjct: 239 AV------------GNDELRIEITGKESWITVKGSKSKKSLAEKLYSNGEVLTFNGDEQY 286 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 +L IGAPA V++ Y+G+ V L +VAR+ L Q Sbjct: 287 RLTIGAPANVKLYYKGQEVPLKI---DGRVARIRLPLAQ 322 >UniRef50_A8FT69 Putative uncharacterized protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FT69_SHESH Length = 310 Score = 208 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 83/329 (25%), Positives = 133/329 (40%), Gaps = 36/329 (10%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 T + + G+ L+ ARE+ G S +A +L L+ V DIE D ++T+++GY Sbjct: 18 ETDTSEQEDSLGSLLKAAREKQGASVADIAGQLHLRPCIVEDIEADNFGEIASATYVKGY 77 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +++YAR+V ++ + L++Q P A MQSFS R+ RDG LM T+ Sbjct: 78 VKNYARIVQADKKAIQACLDRQLP--KASAPEMQSFSRKTTRQARDGRLMFVTY------ 129 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 + S+ + L+ T + A + V Sbjct: 130 ----------------LIAFILLALLVLWWVQKSDTLSDIDLSKPTVEEMADSQLTQVEV 173 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 +T DP A + + A + + Sbjct: 174 ASTLVEE-----------GDPLTGLQTDTHTATATKTPSDRESEKGEQADAVEMESVPTS 222 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 V V ++L + DCW+ V DA G L + ++ LN++G P+K+ +GAP AV Sbjct: 223 VEKAVTRLSSLSFDLNGDCWINVKDAKGDTLINDLKTAGSQLNVSGVEPFKITLGAPQAV 282 Query: 305 QIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 I+ G+ V LS F +VARLTL Q Sbjct: 283 SIKLNGEKVSLSDF-PNGRVARLTLPMAQ 310 >UniRef50_Q7VME3 Putative uncharacterized protein n=1 Tax=Haemophilus ducreyi RepID=Q7VME3_HAEDU Length = 323 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 24/332 (7%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRG 63 + + G +L+ ARE L L+ + VA++ LK S + +E D ++A TF+RG Sbjct: 12 PKQENQAKHSLGHKLKQAREALNLTIEDVAKKTNLKKSHIEALENDIFILQNVAPTFVRG 71 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+R+Y R + +P +E + + +V+ M S + K + W+ + T L+L Sbjct: 72 YVRNYLRFLRLP-KEWGDNVNYGEVILPKEVSNMASATT-TEHKSQTKWVKSITVLILLA 129 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 I ++ WWWQD + +Q+ S + +N Q + L T+ ++ Sbjct: 130 AISMTLLWWWQDYQQEQK--------SREQFVNNVTQEEPSALPTALVEPEPPSTLEANI 181 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + + ++ +T ++P A+ P A A P LP Q Sbjct: 182 AEQSQSSVKTELHSSPPNTTFDTIEALDEPVNILQQINPEVAAADAIKPS----LPDTQE 237 Query: 244 GVTTPVADPNALVMNFTA-DCWLEVTDATGKK-LFSGMQRKDGNLNLTGQAPYKLKIGAP 301 T+ + L + T + W+ V KK L + L G Y+L IGAP Sbjct: 238 VATS----NDELRIEITGKESWIAVKVPNSKKSLVEKLYANGEVLTFNGNEQYRLTIGAP 293 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 A V+I Y+G+PV L +VAR+ L Q Sbjct: 294 ANVKIYYKGEPVLLKI---DGRVARIKLPLVQ 322 >UniRef50_Q1QTK9 Transcriptional regulator, XRE family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTK9_CHRSD Length = 351 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 22/351 (6%) Query: 1 MNTEATHDQNEALT-----TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 M+ A T G +LR RE+ GLS + VAE+L L+ + V+ +EED+ Sbjct: 1 MSDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQV 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 +T+ RGY+R+YA+L+ + ++ + + ++ + + W+ Sbjct: 61 PIATYRRGYLRAYAKLLGVDDKRVAQAYDALHGRDDLDRTVTPAY-RSQPPSRLGAWVFK 119 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQ----EEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 L++ + + WWQ R+ + + +++ +++ + E G + S T Sbjct: 120 LVTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQDGDVTQEDGGDASVTESAT 179 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQN----------AVVSPSQANVDTA 221 D + + AS D + P + VD A A D A Sbjct: 180 GDAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGA 239 Query: 222 ATPAPTAATTPDGAAPLPTDQAG--VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGM 279 + A ATT + P TD A ADPN L + F W E+ DA ++L +G+ Sbjct: 240 SPEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGL 299 Query: 280 QRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Q + G P++L +G V+I Y+ VDLS +N VAR TL Sbjct: 300 QDAGTQAQVEGTPPFRLTVGNATGVEISYRDDNVDLSEHTGSNNVARFTLG 350 >UniRef50_C6XEI7 Putative uncharacterized protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEI7_METSD Length = 336 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 88/322 (27%), Positives = 134/322 (41%), Gaps = 4/322 (1%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 + A + GA LR AREQ GLS + RL + + +E D T RG+IR+Y Sbjct: 19 SSHASSIGAILRAAREQKGLSVIDIHARLRISERQIHALETDDFSLLPEPTIARGFIRNY 78 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 A+ + I E LL Q P K + S ++ + + W + + V++G + Sbjct: 79 AKFLEIDAEPLLAAYRAQMPSEEQKNISIPSANIPITQSRTTDWKKYI-YASVLVLLG-A 136 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 G W D SS+E+S + + + A T P Sbjct: 137 GVWLLYDENLIPGIPDLHLGSSSSEVSPAQGESLPQAALPAAERESAATQAPAQGEALAL 196 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 QT APA +PQ + A P AT +AP T+ T+ Sbjct: 197 PPEQTSDQAGAAPAAEPQAAPAAAVPATPSAIAPAVQPLPATPAATSAPASTNADSTTSS 256 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 VA + + + FT D W+ + D GK++F+ +R + G+ P K+ IG A Q+ Y Sbjct: 257 VA-LHKVRLVFTEDSWVSIVDRHGKEIFNKTKRAGSEDAVEGEPPLKVTIGNAAGSQLIY 315 Query: 309 QGKPVDLSRFIRTNQVARLTLN 330 KPVD + + R N V R+TL Sbjct: 316 DDKPVDTAPYNRLN-VVRITLE 336 >UniRef50_C7R5S7 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5S7_KANKD Length = 303 Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 35/331 (10%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 T+ T +++ + G+ L+ AREQ G+S + V ++L L TV IE D ADL +TF R Sbjct: 4 TDQTLEKDVQFSPGSLLKQAREQAGVSIEDVMQKLKLTRQTVVSIEADDYSADLPATFYR 63 Query: 63 GYIRSYARLVHIPEEELLPGLE---KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 GY+R+YA L+ + +++L+ + K+ L + + L K + ++ T L Sbjct: 64 GYLRNYAELLKMDDDDLVENFDNYCKRNNLFTQNEQSLATIELEKPITSSNWFIKAITTL 123 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 V+ ++ + ++K QE +A S SEQ ++ L S D T Sbjct: 124 VVLALLFAI-YYLLVEKKIWQE--------FTASTESASEQETTLTLGQSEEGDLLT--- 171 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 P V +TN + +T P Q A + + ++ PTA Sbjct: 172 -PEPVIADSTNNLSANITDP----QDQATAALDDKELLSESMVVEEPTA----------- 215 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 T +V+ F+ DCW+ +TDA GK L G+++ +++L+G P +L +G Sbjct: 216 ---EAATIVSNTGGEVVLVFSDDCWVRITDANGKVLALGIKQGGTSMSLSGPTPIELTLG 272 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P+AVQ+ YQ +PVDLS + + ARL L Sbjct: 273 KPSAVQLSYQNEPVDLSSY-PDTRAARLILG 302 >UniRef50_A6VQX7 Helix-turn-helix domain protein n=4 Tax=Pasteurellaceae RepID=A6VQX7_ACTSZ Length = 312 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 140/334 (41%), Gaps = 26/334 (7%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLAST 59 M+TE + G + R ARE LGLS + A++L L+V ++ IE ++ + +T Sbjct: 1 MDTE----EKNVAALGEQFRQARENLGLSLEEAAKKLNLRVQVLQFIENNEFAQKSIPAT 56 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEK--QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 F++GY+RSYA+LV +PE + P A ++ + W+ FT Sbjct: 57 FMQGYVRSYAKLVKLPESIWRGAVPSFGDMPKNDLSRAARIDKAINPHSSHNNRWIGYFT 116 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 ++L V G++ WWW++ + +E T+ Q+ + + S Q + + Sbjct: 117 AIILLFVAGMTALWWWENYQQSNKERETLV-QNYTPVETTSVQSKDL------------- 162 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 P V ++T + + + N ++ + TA + A Sbjct: 163 -LPAVQVPVNPSDTAAETLMQSERPTASTIESGTVSTDTNSTQSSVESLTAQNNVESAVE 221 Query: 238 LPTDQAGVTTPVADPNALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 D PVA L + TA W+ V DA K L R+ LN APY + Sbjct: 222 NSDDSQPAAAPVAADGDLQIEITAATSWISVKDAKRKVLAQKEYRQGETLNFKDGAPYAV 281 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 IGAP+ V+I Y+G+ L +VA+ L Sbjct: 282 IIGAPSNVKITYKGENYPLKV---DGRVAKFKLQ 312 >UniRef50_Q15R55 Transcriptional regulator, XRE family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R55_PSEA6 Length = 345 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 25/349 (7%) Query: 1 MNTEATH-DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M+ E H ++++ G L+ AR + GL+ + +A + LK S + +E D+ ++ T Sbjct: 1 MSEEVQHMEESQVFGPGPVLKAARLEKGLTVEQIAGLIHLKPSLIIALENDEYDPSISMT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F++GY++ YAR V + E ++L GL+ + A +QSFS + D LM T+L Sbjct: 61 FIKGYLKLYARQVDVSEAQVLDGLDNLDTHKKEP-AKLQSFSRRVAHQANDDKLMLVTYL 119 Query: 120 VLFVVIGLSGAWWWQDRKAQQEE-ITTMADQSSAELSSNSEQGQSVPLNTST-------- 170 +L +V+ L WW+Q + + T QS A+ + SE+ + + Sbjct: 120 ILAIVVALVVVWWFQQGDNETASTLDTPTVQSEAQNNVKSEKPVDIQSDVENDTAVIATG 179 Query: 171 --------TTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAA 222 +TD A +T + +N P V+ N++++P A+ Sbjct: 180 DVNESGLRSTDMAQETTEFPRDEVNQSNEIQPEVSG----SLEDSNSILTPDNASPQDGV 235 Query: 223 TPAPTAATTPDGAAPLPTDQAGVTTP-VADPNALVMNFTADCWLEVTDATGKKLFSGMQR 281 PA T + A P A T + +V F DCW+ V DATG+ + G++ Sbjct: 236 APAVTVNSESASAQLNPQVSASAQTEQTGELVDVVFTFNDDCWVSVIDATGETIAVGVKV 295 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++++G AP+++ +GAP+ VQI+Y + +D+S F+ N A+ TL Sbjct: 296 AGRVMSISGVAPFEVILGAPSVVQIRYADEDLDMS-FLAPNSTAKFTLP 343 >UniRef50_C6MCA6 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCA6_9PROT Length = 408 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 126/320 (39%), Gaps = 27/320 (8%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 + G LR AR + +S + V+ +L L + + IE + TFLRG+IR+YA L Sbjct: 115 VQSVGHLLRRARVRKNMSIEDVSRQLRLSIQQIEAIENEDFEKLPGKTFLRGFIRNYANL 174 Query: 72 VHIPEEELLPGL-EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 V + +LL L E + + P ++ L + + + V+ ++ L Sbjct: 175 VQLNPMQLLQLLPESTRIISTYERTPFRNKQLSFSSSRENSGNNSLVIAVILAIMVLGTY 234 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + +++ ++ + ++ SA S + + L ST D T P + TN Sbjct: 235 FIFENNGWNKD--SNISSVGSAAQSESGTTSMEIRLPMSTAAD--NTVNLPIMLSVAPTN 290 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 T + P AV ++ N T PA + Sbjct: 291 T----LNDPGKAV----------AELNAKTELIPAEENIIAQSNELQNE--------KSS 328 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 D L F AD W++V DA G LF + + + G+ P + IG + V + Y Sbjct: 329 DSGNLYFKFIADSWVKVVDAKGVALFEQLMKGGSEQIVVGKRPLSIVIGNASGVNLTYND 388 Query: 311 KPVDLSRFIRTNQVARLTLN 330 K +++S + + + AR L Sbjct: 389 KEINISSYKKQDGTARFILE 408 >UniRef50_A0YCF8 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCF8_9GAMM Length = 282 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 50/331 (15%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ E T G LR RE++G S + +AE+L L V +E D F Sbjct: 1 MSEETNE------TPGQLLRVERERMGFSVRQMAEKLHLLPYQVEALEADDYLILNGDIF 54 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+++YA L+ + + L+ P R PM + S + ++ G + + W + Sbjct: 55 CRGYLKTYAGLLGMDAKLLVDAYMSIRPERPENDYPM-TASTSQIQRPHKGRSIQY-WCL 112 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 ++ + W++ R S G V D + + Sbjct: 113 AASLVVIVVLWFYGSRV--------------------SVDGGEVVGVAEFIVDGSGENAV 152 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A+ T +++AP AV +Q+ ++ A D + A T+P+G Sbjct: 153 AATGKRRKDKTTADSLSAPETAVGNRQSNIIGLLPA--DISLDERDIAVTSPEG------ 204 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 L F+ DCW++VTD LF+ +++ + L L+G AP+ + +G Sbjct: 205 -------------LLSFRFSGDCWVKVTDGQNVVLFAELKQAEERLQLSGVAPFNVLLGF 251 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 A V+++Y G+PV + R + N A T+ Sbjct: 252 AANVEMEYNGEPVSI-RVNQKNNSANFTVGQ 281 >UniRef50_A3WP02 Predicted transcriptional regulator, contains N-terminal xre-type HTH domain n=1 Tax=Idiomarina baltica OS145 RepID=A3WP02_9GAMM Length = 387 Score = 201 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 96/367 (26%), Positives = 159/367 (43%), Gaps = 42/367 (11%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + + G L+ ARE ++ + A+RL L++ + IE D +TF++ Sbjct: 23 SSQEQSRRPIAGPGHILKEAREAKSMTPREAADRLRLRLQVIELIEADDYDTFSTTTFVK 82 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 GY+R+YA+L+ + + ++ K +R + PMQSFS + ++ D LM TWLV+ Sbjct: 83 GYLRAYAKLLGVDQSKIDEAY-KSLNIREPESTPMQSFSRRVKHQESDNRLMMITWLVVV 141 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNT-------------- 168 VV WWWQD +++ +Q+ E + +++Q S T Sbjct: 142 VV-IALVIWWWQDSDLSFSKLSNDVEQAVTEQTDSAQQEDSTDTPTLRQSNQAQEATSSE 200 Query: 169 ------------------------STTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVD 204 P T P A + T++N Q + A + Sbjct: 201 QPLLESEVSAADASTSLSINDPAQQDEMSPDTIEQPVAEMPETSSNQQVTSEAMSEVAQE 260 Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 N A +TA+ P PT + + D A + A LVM F+ +CW Sbjct: 261 SDANEPRETRTAEQNTASEPEPTVSASSD-ANSVSGGDEDEADNTALAADLVMEFSEECW 319 Query: 265 LEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 ++V DA G+ G + + + + G+AP+ I PAAV I Y G +DLS + R ++V Sbjct: 320 VKVEDADGEVQAIGTKAQGYRMPVPGKAPFSATICKPAAVTITYAGNALDLSNY-RQDRV 378 Query: 325 ARLTLNA 331 ARLT+ + Sbjct: 379 ARLTIPS 385 >UniRef50_Q2BGS7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGS7_9GAMM Length = 341 Score = 201 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 14/344 (4%) Query: 1 MNTEATHDQNEALTT--GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 M+TE Q E L GARL ARE L LS + V+ L L +R +E + Sbjct: 1 MSTEEQECQPELLAEEWGARLTTARESLSLSIEQVSADLNLPQDYIRKLEIGSLEGLPSL 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 F RGYIR+YA+L+H+ + +L+ E+ + S + ++ K D + +W Sbjct: 61 VFARGYIRAYAKLLHLDDNQLVSEFEQLHGESSGGAIKPVS-RVREQVKVNDPVMKLSSW 119 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 + + +IG++ WWWQ + ++ ++ + + + D Sbjct: 120 IFVLAIIGVTV-WWWQTQYGGSFSFSSSSETEQMTEQPLVAEDNADTADVVELEDGTAKL 178 Query: 179 TPPASVDTTATNT--QTPAVTAPAPAVDPQQNAVVSPSQANVDTAA------TPAPTAAT 230 P D+ A + PA T + +++ +QA ++ PA AA+ Sbjct: 179 VLPVLEDSPAGEEAQEEPASTEAETSEVAEESEPQYLTQAEINKLQQAIDDNAPATHAAS 238 Query: 231 TPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 P A + + + A + +F A+CW+ + DA GK LF+ ++ K +L ++G Sbjct: 239 EPAVQAAPAIEASVAQSSEALTAKISADFVAECWVSIKDADGKTLFNNLRGKGQSLEVSG 298 Query: 291 QAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 +AP + +GA AV + + G +DL + R N V R++L + Sbjct: 299 KAPVSILLGAADAVGRFTFNGTELDLDKHSRKN-VVRISLPISE 341 >UniRef50_Q57065 Uncharacterized protein HI0367 n=17 Tax=Pasteurellaceae RepID=Y367_HAEIN Length = 303 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 27/324 (8%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRGYIRS 67 + L+ G R RE L LS + VA+ + L+ S + +E ++ + F++GY+RS Sbjct: 5 TEQVLSPGEIFRQTREALNLSLEDVAKEITLRPSILEQLENNEFIQKSTPAIFVKGYVRS 64 Query: 68 YARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 YA+ + +P+ + + + +S + + W+ T +V +VIG+ Sbjct: 65 YAKFLRLPDSVWENIVFAETE-KNDLGKNARSTRAVNQYSSHNRWIGRLTAIVFMIVIGM 123 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 +G WWWQ + +E + A +N V S T P T + P S Sbjct: 124 TGLWWWQSYQQNTQERDDLVQSYVASTENNQPATALVTTEESNKTVPETAA--PVSQPVE 181 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 TN P + P+ N + + + +A P + T Sbjct: 182 ITNNLLPEIAQENSVSQPK----------NDEKSVSEIQSAVENPSISP---------TL 222 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 P+A + ++ T W+ V D L ++ L G + L +GAP+ V+I Sbjct: 223 PIAKGDLVIEILTNSSWISVKDNARHVLAQKEYKQGEILTFNGNE-FSLIVGAPSNVRIT 281 Query: 308 YQGKPVDLSRFIRTNQVARLTLNA 331 Y+G+ L +VA+ L+ Sbjct: 282 YKGENYPLKV---DGRVAKFKLSQ 302 >UniRef50_UPI0001698B56 hypothetical protein Epers_35392 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B56 Length = 356 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 134/334 (40%), Gaps = 20/334 (5%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G+RLR RE LG+ Q +A +L L + + +E D + F++GY+++YAR++ + Sbjct: 21 PGSRLRKEREALGIDQMKLAAQLHLSETMIEALEWDDYEVLPSPVFVQGYLKNYARILGV 80 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 PE E++ APL A + + K + G + TW+++ ++ L WW Sbjct: 81 PEHEVIDAYRALAPLPEEARALNGNRKVLKEMRSNHGGVRIVTWVIVIALLLLLAIWWQG 140 Query: 135 DRKA-------QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 +++ Q +M ++ A + T PAT PP D Sbjct: 141 EQELHDMSTADQATLQESMLEEGEAAPDNPGLSLPPPLEVTPKKIAPATEIEPPTPQDEA 200 Query: 188 ATNTQTP----------AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 A P V A P + A ++ V+ APT + + Sbjct: 201 AVVEPPPLTQTLTEETTQVDAREPVGAAAEIAAEQSAEVVVEALQEAAPTTSDAVEAEES 260 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQAPYKL 296 + D A A P+ +V+ F CW E+ DA+G+ G + L APY++ Sbjct: 261 VEVDAAPAEPGSAFPS-VVIEFNDSCWAEIRDASGRTRLIGNMKVGDRRVLGNWPAPYRV 319 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 G AV + G DL R N VAR + Sbjct: 320 LFGNAGAVNMSINGDTFDLEPHTRRN-VARFRFD 352 >UniRef50_A1TZP9 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZP9_MARAV Length = 340 Score = 195 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 21/345 (6%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E + G +LR ARE+LGLS +A++ L+ S ++ IEE F Sbjct: 1 MTGEEQSQPASEASVGQQLRRAREKLGLSVSDIADQQHLRPSVIQSIEEGDYSKVDTELF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 L+GY+R+YAR V + + L+ L+ + PLR + QS L +K+ + Sbjct: 61 LKGYVRTYARQVQLNADALIAALDSELEPLRQQREQEHQSNPLVDIERKKKRKRQIAKLV 120 Query: 120 VLFVVIGLSGAWWW------------QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLN 167 VL +G+ G + + E + + ++ ++ S E+ SV Sbjct: 121 VLLAFLGVVGFLAYSYLVKPVSEPVQSNADGISESLEAQSGEAVSDASPKLEEAPSVSEE 180 Query: 168 TSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA-P 226 +P + SV T++ AVT +P + + + + + P Sbjct: 181 AEQPAEPEQMDSDTGSVGN--VETESGAVTDTEALSEPTASGSLGQEELLSEQPSVEQPP 238 Query: 227 TAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 A +PD A ++ V + L M F+ DCW++VTD G +L S ++R+ L Sbjct: 239 VVAQSPDPAL----TESEVMEDPVETVRLAMTFSDDCWIQVTDGAGNRLASALRREGDAL 294 Query: 287 NLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 ++GQ P ++ +GA +AV+ +++QG+P+ L F N + TL Sbjct: 295 EVSGQPPLRVVVGAMSAVESLEFQGEPMGLGNFRVVNNRSEFTLE 339 >UniRef50_B8F8B5 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F8B5_HAEPS Length = 360 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 90/364 (24%), Positives = 146/364 (40%), Gaps = 41/364 (11%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRGY 64 T + L+ G +L+NARE L L+ + VA + LK S + IE D + F+RGY Sbjct: 2 TMTETMTLSLGQQLKNAREALNLTIEDVARKTNLKKSHLEAIENDIFILPSVPPAFVRGY 61 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +R+Y R + +PE + + K + K K + W+ TW+VL Sbjct: 62 VRNYVRFLRLPETLVNSV--NYGEVTIPKEVRKAAPIAVKNHKSQMRWVKGLTWIVLLSA 119 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT------------- 171 +G++ AWWWQ+ + Q + ++ + E+ Q P+ T Sbjct: 120 VGMTLAWWWQEHQKDQANREQLIVNTTEATAKVVEEPQVTPVEPQPTPAEVPQAVTLPAK 179 Query: 172 -TDPATTSTPPASVDTTATNTQT-------------PAVTAPAPAVDPQQNAVVSPSQAN 217 +PAT +T S A VT P + + V+SP+ + Sbjct: 180 NAEPATPATVAESRTPVAVEQAELVQSVQTEPVLTQTEVTPPVQTGSSRISMVISPNSGS 239 Query: 218 VDTAATPAPTAATTPDGAAPL-------PTDQAGVTTPVADPNALVMNFTA-DCWLEVTD 269 V A T + A + ++QA T A L + T + W+ V Sbjct: 240 VAAQVPTEVAALTETEQAVNVLQAMQTEASNQAEEPTQTAVEEELRIEITGAESWITVRT 299 Query: 270 ATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 A K+L + + L+ Y+L +GAPA V+I Y+G+ V L +VAR L Sbjct: 300 AQNKRLAERLYKAGEVLSFNDNEQYRLTVGAPANVKIYYKGQVVPLKV---DGRVARFKL 356 Query: 330 NAEQ 333 + Sbjct: 357 PLAE 360 >UniRef50_A3Y633 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y633_9GAMM Length = 343 Score = 191 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 92/345 (26%), Positives = 159/345 (46%), Gaps = 25/345 (7%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 + ++ + G L+ R +L L ++ VA +L + + VR +E ++ ++TF RG Sbjct: 6 QENNENKIIVNIGKELQRKRNELNLDERQVATQLKIPIEQVRALESNQFDYFRSATFARG 65 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+++Y RL+ + E+ +L + A V P+ GK+ + D ++ + ++ + Sbjct: 66 YLKNYVRLIELDEDRILGAFD-DALDDEPGVQPINKN--GKQAQMADPIVILVSVVIGAM 122 Query: 124 VIGLSGAWWWQDRKAQQEEITT-MADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP- 181 +I L A+WW + I+T A Q + E+ + + L + T T +TP Sbjct: 123 LIFL--AFWWPTMMQKSPIISTRPAIQPNNEVVQEAPRVAEPELIATETPVDTTETTPSV 180 Query: 182 ---------ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV------DTAATPAP 226 S D T+ TP T P A ++A V + D P Sbjct: 181 STPDESQNLTSTDVEKTDEATPVETTPVVAQVEDEDADVVTGLSAETIAILKDAGVNPDN 240 Query: 227 TAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 + + + + A P+ D + LV+NF++DCW EV D G+ L+SG++ D +L Sbjct: 241 ISLPANEPSLAEKAEIAANQPPLYDDD-LVINFSSDCWTEVRDGNGRILYSGVKTADSSL 299 Query: 287 NLTGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLN 330 LT Q PYK+ +G V + Y+G+ D S F R N +AR LN Sbjct: 300 TLTAQGPYKVVLGFAGGVSSLIYKGEEFDFSSFTRKN-LARFELN 343 >UniRef50_A4BSV3 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSV3_9GAMM Length = 363 Score = 191 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 82/355 (23%), Positives = 144/355 (40%), Gaps = 33/355 (9%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 E E G LR ARE+ LS ++A+ L L+ + +E D T++RG Sbjct: 12 EIESLSKERHGPGLSLRQARERCRLSVASIADTLHLEPRVIEALEADDYSQLPPVTYVRG 71 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+ +YARLV++P +L E+ ++ + + G RR R ++ + F+ Sbjct: 72 YLSAYARLVNLPVANVLQAFERVGGEERSQPLTLHAGRAGNRRMARFSIGSSWLLTLAFI 131 Query: 124 VIGLSGAWWWQDRKAQQEEITT---------------------MADQSSAELSSNSEQGQ 162 + +SG +W ++ E + A S L++ + Sbjct: 132 AVLISGWMFWTQGQSTSEVASPDENNAVDAGPDTMLDPKSEPDAAAAGSEILAAPTGADT 191 Query: 163 SVPL----NTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV 218 ++P S TT PA S D + +T T+ ++ ++ ++ Sbjct: 192 ALPAHRAETASLTTQPAAPPGERLSRDPHMSGAETAGETSAVSPTPQREAPLIPSAKIGT 251 Query: 219 DTAAT--PAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF 276 + A PA AATT A Q L + + W+ V A G++L Sbjct: 252 ASIADHKPAALAATTVGVAPESIAAQRAGALET-----LKFDASGKSWVTVEAAGGQRLV 306 Query: 277 SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 G+ + + +TG+ P+++ IG V +++ G VDL + N VAR TL+A Sbjct: 307 YGLLERGESRRVTGRPPFRITIGDATQVMLRHNGTRVDLGPYTHAN-VARFTLSA 360 >UniRef50_Q1H0U8 Putative uncharacterized protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0U8_METFK Length = 300 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 36/316 (11%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L ARE LGL + VA RL L + V+ +E D A + RG+IR+YARLV+I Sbjct: 21 IGPTLVAARESLGLGAEDVANRLRLSLRQVQALENDDFAALPEAVITRGFIRNYARLVNI 80 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 LL + P++ ++ + S ++ + W + W + +V+ ++G + Sbjct: 81 DAAPLLRVYSQYVPVQDSQAISIPSANIVISGEAGAPW-RPYMWFGILLVVLMAGWVLYV 139 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 D + T +++ A +S E P A +P Sbjct: 140 DFYQAHDPDTGLSEAIVAPISDKDELISGKP---------------------EAEALASP 178 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 PAP +P PA AT P Q + P A+ Sbjct: 179 DPMPPAPTDEPA-------------AVEQPAAVPATPSAVEITPPIAQPALALPAAEDAR 225 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + T W+ V+DA GK++ S + +TG+ P+++ +G +++Y PVD Sbjct: 226 IKFTVTEATWVSVSDANGKQIMSKTLEPNSEEVVTGKPPFRIVVGNIHGTKLEYNNNPVD 285 Query: 315 LSRFIRTNQVARLTLN 330 L+ + + N VARLTL Sbjct: 286 LAPYAKVN-VARLTLE 300 >UniRef50_A6VV05 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VV05_MARMS Length = 341 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 139/340 (40%), Gaps = 15/340 (4%) Query: 1 MNTEATHDQN------EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA 54 M TE D + + + G RL+ R +L ++ VA L + + VR +E + Sbjct: 7 MTTEFQTDASVSKTNMDTINIGNRLKAKRLELEFDERHVATELKISIDQVRALEANNFKY 66 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM 114 + TF RG+++SY RL+ I E+L + + + P+ + + Sbjct: 67 FRSITFARGFLKSYCRLLGIEPSEMLRAFDSEREDAEPTIKPVDKVNKQTNFGDPIVIFI 126 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQ-SSAELSSNSEQGQSVPLNTSTTTD 173 + + + V + +WW + + + ++ S + + + ++ +S + D Sbjct: 127 SVVIVAVLVFL----VFWWPSQSSVSVASNEIKNEVSETATAPDLDATEAFSGESSGSVD 182 Query: 174 PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP- 232 + S + DT + P N V + A Sbjct: 183 TSNVSNSNSGADTDVASVDNTESVPSVQVEKPASNGGVVTGLSAETMAILEEAGVKPEDV 242 Query: 233 -DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 A +P + A + + + + F ADCW EV DA+GK LFSG++ L+LTG+ Sbjct: 243 IRATAEVPAELAAAPKLPSYTDEVEIAFDADCWTEVRDASGKILFSGVKSAGSQLSLTGK 302 Query: 292 APYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLN 330 APY++ +G V ++Y+G+ D S F + +AR L Sbjct: 303 APYRIVLGYAKGVSSLKYKGEVFDFSSFTHKD-LARFELK 341 >UniRef50_A4XY33 Helix-turn-helix domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XY33_PSEMY Length = 329 Score = 188 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 90/333 (27%), Positives = 146/333 (43%), Gaps = 13/333 (3%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 ++EA + G LR ARE G S VA +L L + IE +TF Sbjct: 5 HSEAVTQPMPS-NPGESLRQAREIKGWSVAEVAMQLNLTPQRLAQIEAGAFDKLPGTTFA 63 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RGYIR+YA+L+ + + L+ + Q A + + S + + ++ +L Sbjct: 64 RGYIRAYAKLLELDQNRLVLEFD-QFTGTDATGSNVHSLGRIEEPVRYSQSILRLVSFLL 122 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 + + +G WWQ+ Q +T++AD + G + + +P + Sbjct: 123 LLALIGAGFLWWQE---QGRSVTSLADLGLEHVEVEGADGTT---QVHSLAEPEDQAVVA 176 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD----GAAP 237 A + +A+ P AP + + A T A A AT PD AP Sbjct: 177 AQGNESASPLLLPIEPGEAPEAVTETQQPAAEGTAAAPTPAPSAAPEATQPDTAAAPQAP 236 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 + A AL + FTADCW +VTDA GK L S ++R + LTG+AP +L+ Sbjct: 237 AAPEPAAPVEVAPGQGALSVQFTADCWTQVTDADGKVLLSALKRSGERIELTGKAPMELR 296 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G Q+++ G+ VD++ ++ T + ARL L Sbjct: 297 LGFARGAQVRFNGENVDVAPYM-TGETARLKLG 328 >UniRef50_C5S9Y0 Transcriptional regulator, XRE family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9Y0_CHRVI Length = 360 Score = 185 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 135/352 (38%), Gaps = 23/352 (6%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 +NT + D N T G RLR RE L + VA +L L+ V IE D+ A Sbjct: 5 INTTLSDDPNMLEPNDTPGRRLRALRESRKLDVERVAAQLHLQRHVVEAIEGDQYERLPA 64 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 F+ GY+++YARL+ ++ P+R ++ S + G + Sbjct: 65 PVFVVGYLKNYARLLGADPAPIVTAYRAMVPVREVGLSHALSVPDDSSQSSGGGRWVWAV 124 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA-- 175 ++L V+ W + + + +A E S+++ + P +TS A Sbjct: 125 AVLLVGVVAGMATLWLRGQSDSTLQSDALALSPKGEESASTVAAPAKPSDTSGVATAANA 184 Query: 176 ----------TTSTPPASVDTTATNTQTPA-------VTAPAPAVDPQQNAVVSPSQANV 218 T + PP S+ +Q+PA APA +V+ S Sbjct: 185 TSVSAAGPESTIAAPPESIPLRGAQSQSPAGATPAEPAEPAAPATPAPVETLVAASTLTS 244 Query: 219 DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSG 278 + T A A P +V+ FT W++V A G + +G Sbjct: 245 AQSTTNEALADEEASDAEAQAESVTEEPAPEPTSTEVVLEFTGTSWIDVRGAGGGVVLNG 304 Query: 279 MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 R L G+ PYK IG +A Q+ G+P DL R R VAR TL+ Sbjct: 305 EMRSGDRRVLDGEPPYKFVIGNASATQLTIGGRPFDLQRRAR-GNVARFTLD 355 >UniRef50_A5EVN3 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVN3_DICNV Length = 326 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 131/336 (38%), Gaps = 13/336 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + + T G LR ARE+ S A++ L + ++ +E + A F Sbjct: 1 MTDINDNKTSIDDTIGDALRAAREEKQWSITEAADQTNLNPTIIQLLEANDFKNIGAFVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+ SYAR + + +E++ + P + + + R KR+ T L Sbjct: 61 TRGYLNSYARALGLNADEIVQLFNRLYPDTSQPRISSANAASQTRSFKRNNIAAWLTILP 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + +V + + Q A + N ++ P T P Sbjct: 121 ILIVAAALAV-------QIMNPNSWLITQFKATFAPN---AKTAPATGENLVVQIGTEPP 170 Query: 181 PASVDTTATNTQTPAVTA-PAPAVDPQQN-AVVSPSQANVDTAATPAPTAATTPDGAAPL 238 + +T + P +T+ PA P++N A+++P+ T +PA ++A + A Sbjct: 171 ETAANTALPPPELPELTSLETPAPQPEENTALINPTTPETTTTESPAESSAPEQNNALAP 230 Query: 239 PTDQAGVTTPVADPN-ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 T AD + + + T + W+EV D+ K L+S + ++ L+ Y + Sbjct: 231 ENASTAQPTATADASKTIRIEITGENWVEVRDSNRKILYSKTFKSGESIELSDGQTYTVS 290 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 +G P + + G+P D ++ R + Q Sbjct: 291 LGRPQSANLMIAGQPADWQKYRVEGNQRRFRIGTAQ 326 >UniRef50_C0N2P2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2P2_9GAMM Length = 309 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 131/335 (39%), Gaps = 30/335 (8%) Query: 1 MNTEATHDQNEALT---TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M+ + D A T G+RL+ ARE S VA +L L V +E + Sbjct: 1 MSDGHSDDATVATTSPTIGSRLQQAREAKKYSVAEVAAQLRLNKDIVTYMENQQWDKLHG 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 T+ RGY SY + + +P +E+L + SL + D F Sbjct: 61 RTYARGYFASYVKFLGLPFDEMLAVFNDEYQTSEP--------SLNLFQHGHDQLDRQFP 112 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W +L ++ + W QQ + T + Q+S S N E+ + + +D + Sbjct: 113 WFMLALIATVMVVIWLA---FQQWQQTQVVQQASMAESDNVEEADNFSTSIVDPSDAIES 169 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 P T +Q + + + + + T+A + Sbjct: 170 PNQPMISSAEQT---------------AEQLGISANNLDEITATEVASSTSAALERNSQM 214 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 TDQ + + L ++F+ +CW+EVT+A + L S + R D +L L P + Sbjct: 215 TVTDQQANEPVSTEESTLQLSFSGECWVEVTNADSQVLVSKVMRADQSLLLKSDQPLSIL 274 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +G A + + + VDLS ++ +ARLTL E Sbjct: 275 LGRAKAASVTFNNQTVDLSPHMQ-GDLARLTLGVE 308 >UniRef50_B3PDM0 Putative DNA-binding protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDM0_CELJU Length = 314 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 28/337 (8%) Query: 1 MNTEATHD-----QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 M E + + L+ G L ARE+ GL+QQ A+ L + + VR +E D Sbjct: 1 MTAENQSEANVSKSSHELSPGTILAAARERAGLTQQQAADELYMTLGKVRALEADDYQRL 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 + TF+RGY+R+YA L+ I ++++ ++QA Q + W Sbjct: 61 HSDTFIRGYLRAYANLLKIDVDQVIQAYDRQAQRLGLVE---QYVPRSVDNSNKKIWQFV 117 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 L VV+ L W++ +RKA + + D + S+ + + S Sbjct: 118 GLILAALVVLWLISVWFFDNRKAPEYPLPAALDIAEDIAVSSGQVSSLAQIPLSV----- 172 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 PA+VD +T++ + V P A A+ S +V + + + AA + Sbjct: 173 ----QPAAVDVASTSSLSGMV--PVSAGVASSAALSVASATSVSESVSVSSVAALSRRTV 226 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 P Q + + L M F+ +CWLEV+D+ G L + ++R L + G+AP+ Sbjct: 227 VQDPNAQ--------NLDELYMEFSDECWLEVSDSRGDVLATELERPGNRLLVKGRAPFD 278 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +K+G AV + G+ V + TN V + + A+ Sbjct: 279 VKLGNAKAVTMTLNGQSVTIIPSPHTN-VLTMKVGAQ 314 >UniRef50_A7JX56 Putative uncharacterized protein n=2 Tax=Mannheimia haemolytica RepID=A7JX56_PASHA Length = 332 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 87/329 (26%), Positives = 138/329 (41%), Gaps = 17/329 (5%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRGYIRSYAR 70 AL+ G +L+ ARE L LS VA++ LK S + +E D ++A TF+RGY+R+Y + Sbjct: 13 ALSLGQQLKAAREALNLSITDVAQKTNLKKSHIESLENDIFILQNVAPTFVRGYVRNYVK 72 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + +PE L+ + +V + S + + L T LVL +G++ Sbjct: 73 FLRLPES-LISSVNYGEVTIPKEVTKVSSVKPSSNSQGKT--LKYLTVLVLLAALGMTLL 129 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 WWWQ + +QE + +N+ TS + + Sbjct: 130 WWWQGYQKEQENREQFVSSAPVAEVANTATNNDASAQTSVPVQQPIQVSEQPAQVAETVV 189 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA-----PLPTDQAGV 245 PA+T V+P Q A +Q +V ATT A ++QA Sbjct: 190 AAEPALTEK---VEPTQAASSPVTQEDVKVVEEVKQADATTAQVEAVNVLQQSQSEQAPT 246 Query: 246 TTPVA-DPNALVMNFTAD-CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 PVA + L + T W+ V A K+L + L+ Y+L IGAPA Sbjct: 247 EQPVAVTNDELRIEITGSQSWITVRGAKNKRLAEKLYNNGETLSFNENEQYRLTIGAPAN 306 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 V++ Y+G+ V L +VAR+ L + Sbjct: 307 VKVYYKGQEVPLKI---DGRVARIHLPLQ 332 >UniRef50_D0KWA6 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA6_HALNC Length = 380 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 140/350 (40%), Gaps = 21/350 (6%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 D + + GA ++ AR GLS +A+ L L + V +E ++ ++R Sbjct: 30 ETTALDVSNRKSLGALIQEARTAKGLSAADLAQSLNLDLKIVERLEANQFEGGPEPIYVR 89 Query: 63 GYIRSYARLVHIPEEELLPGLEKQ-----APLRAAKVAPMQ-------SFSLGKRRKKRD 110 Y++ +A +V + L + Q AP + AP++ S ++ + Sbjct: 90 AYLKHWAGIVGADPQVWLQAYQLQHGGNVAPNKIGVTAPIEVMTAHKTSHTVHSTNQNNV 149 Query: 111 GW--LMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNT 168 G L LV+ V+I A + + + + + + G +V L Sbjct: 150 GRTILRWLLALVVLVIILAVIAIALPSVWQKGLSLLSGKQEQTPLTLNGETSGSTVSLPV 209 Query: 169 STTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 T + P +V T TN P P V P N S + T TPA T Sbjct: 210 QPLPALNTPAEPSKAVTQTTTNEAPPPPPLATPLVAPAANDSASTPPSVTSTTNTPAQTE 269 Query: 229 ATTPDGAAPLPTDQAGVTTP------VADPNALVMNF-TADCWLEVTDATGKKLFSGMQR 281 TTPD AA A T A LV+ +ADCW+EV DA GK+L + + Sbjct: 270 PTTPDTAASTTPTPADATPAEQTAPAAAPNANLVIKVDSADCWVEVRDAAGKRLVYDVIK 329 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 K + G P+ + +G P+AV + ++G+PV L T V R T+ Sbjct: 330 KGEERTVPGAGPFTITLGNPSAVTVLWKGEPVKLGAPNSTTGVIRTTVGG 379 >UniRef50_Q2SDW3 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDW3_HAHCH Length = 330 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 136/334 (40%), Gaps = 9/334 (2%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M++EA + G+RLR ARE LG S AERL + V+ IE+ + F Sbjct: 1 MSSEAASNPAANDRPGSRLRQARENLGWSIPETAERLHVIPRYVKAIEDGEHGQLPGLVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 L+GY+R+YARLV++ E+ ++ LE++ L A ++ +K + L+ Sbjct: 61 LKGYVRAYARLVNLSEDRVIEDLEQELSLGDAGFTEERAAPTPSYEEKPKSGGGLWLILL 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 V ++ + ++ ++T + ++ + + VP +S +P Sbjct: 121 ALAVAAGLIYYFL----SGRDIVSTGSTGTTMQEPEIPSEVVVVPGGSSDAIEPPAPVAE 176 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 S + T +P ++ P + T D + P Sbjct: 177 KDSSAVESEPMLLDGSTLEEEGQEPSPEDLLQPEDTGTAETSASEQPPPVTEDPVSVEPA 236 Query: 241 DQAGVTTPVA----DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 + P A+ F DCW ++ D + ++ G+ R+ ++ G+ P + Sbjct: 237 PSSASEQPAPQAAIGKVAVRATFVGDCWFDLRDKSNNRVV-GLYRQGDVVDFQGEYPLRF 295 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 IGA AV+++ GKP+D ++ N +TL Sbjct: 296 IIGAVDAVKLEVNGKPLDFGQYRVRNNRVEMTLE 329 >UniRef50_C6WV26 Putative uncharacterized protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV26_METML Length = 357 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 130/340 (38%), Gaps = 24/340 (7%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + GA L+ AR+ LSQQ V++ L V V +E D + RG+IR+YARL+ Sbjct: 19 SLGAVLQAARDAKKLSQQDVSDSLRYSVKQVDALERDAFDLLPDAMITRGFIRNYARLLE 78 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQ-SFSLGKRRKKRDGWLMTF--TWLVLFVVIGLSGA 130 I LL + +P+++ + + S + K WL + LVLF ++ Sbjct: 79 IDAAPLLDIYRQLSPVQSPSLLAVNPSMQPVQLTKDNTPWLTYILGSILVLFFLLAWFVY 138 Query: 131 WWWQDRKA-----QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + +A ++ + A+ S +E A P +V Sbjct: 139 IEYLPHQAKIADEAAPQVAAPVAEQPADTQSATEVTLPEAALPEAALPAAERQFPEDAVQ 198 Query: 186 TTATNTQTPAVTAPAPA------VDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 T AV PA V P A S ++V +PAP A P Sbjct: 199 GQDTGLANGAVANAQPATPVIAPVQPATAATPSAQVSSVQVPVSPAPVKAEAPAKVESQI 258 Query: 240 TDQAGVTTPVADPNALV---------MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 ++ + L M T W+ V+D G+ L+ +L+ Sbjct: 259 KPESKANPELKVKPELQTSAGLKKVGMTATEKSWVRVSDKAGQILYEATLNAGDTQSLSF 318 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Q P+ + IG A + G+ +DL+ + R N VAR++L Sbjct: 319 QTPFNVVIGNAKATAVNVSGQAMDLAGYTR-NNVARISLE 357 >UniRef50_A1K3Y8 Transcriptional regulator n=2 Tax=Rhodocyclaceae RepID=A1K3Y8_AZOSB Length = 302 Score = 180 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 119/319 (37%), Gaps = 30/319 (9%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G +LR ARE G S+ VA+ L L + V +E+ A F+RG++R+YAR Sbjct: 14 VPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGPAFVRGFMRNYARH 73 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + LL L+ ++A + + + + + + +++ A Sbjct: 74 LGLDPAPLLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGATLAVILLFAVLAG 133 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 W+ D + NS+ G++V D A P A Sbjct: 134 WYFDWFR-----------TDPPPGLNSDVGETV---LPPAGDVAVEPVPTEPAPVPAGGA 179 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 P P P A+ + DG A T Q Sbjct: 180 PAPVEQQPGTGSAPAPAPAPPAPAPASAAPAS---APLSAADGGAQPATPQ--------- 227 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 L+ F + W+EV D +G ++SG+ ++ G+ P+ L +G V++++ G+ Sbjct: 228 ---LLFRFGGESWVEVRDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVRLEFNGR 284 Query: 312 PVDLSRFIRTNQVARLTLN 330 +DL R VARLT+ Sbjct: 285 EIDLQPHTRV-AVARLTVQ 302 >UniRef50_A6EWG5 Putative uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EWG5_9ALTE Length = 349 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 29/352 (8%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + +A + TG L+ AREQ GLS AVA+ L+ + ++ IE+ K + FL Sbjct: 3 SDDAQQPSSLNEPTGQLLKRAREQKGLSVSAVADAQHLRPAVIQAIEDGKYEQIDSELFL 62 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +GY+R+YAR V + + ++ L+++ PLR KV ++ L ++R L+ Sbjct: 63 KGYVRTYARQVDLDPDAVIATLDEELEPLRQQKVQAEEANPLIDIERRRRRKRRVAKLLL 122 Query: 121 LFVVIGLSGAWWWQDRKA-------QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD 173 L + I + + E + +SA+ E + ++ Sbjct: 123 LMLAIAVIAFLALRFTGELDGITGDTAEPTVSSEPNASAQPEPTEEMASVDGTVDTELSE 182 Query: 174 PATTSTPPASVDTTA--------------TNTQTPAVTAPAPAVDPQQNAVVSPSQANVD 219 P T + VD + P +PAP V+ P+ VD Sbjct: 183 PGTEAALSEPVDEASIVEDNNELAGLPEQPQVNEPDSGSPAPVVEEDSAPAAQPAAEEVD 242 Query: 220 TAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGM 279 + P T+ P ++ T L M F+ +CW++VTD+ G +L + Sbjct: 243 VSRVPVVTSEPEPA------FQESAQPTAAVGSARLEMTFSDECWVQVTDSAGNRLVGSL 296 Query: 280 QRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 QR +N++G+ P + +GA A++ I++ G+P+DLS + N A TL+ Sbjct: 297 QRDGDRINVSGRLPIDVVVGAVDAIESIRFDGQPIDLSGYRVVNNRAEFTLD 348 >UniRef50_A3JJP6 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJP6_9ALTE Length = 343 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 86/349 (24%), Positives = 134/349 (38%), Gaps = 29/349 (8%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E G +L+ ARE GLS VAE L+ ++ IE K F Sbjct: 1 MANEENQAAPGNRPVGPQLKKAREAKGLSVVEVAEAQHLRPVIIQAIENGKYELIDTELF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQ----APLRAAKVAPMQSFSLGKRRKKRDGWLMTF 116 L+GYIR+YAR V + L+ L ++ +A A + +RR K+ T Sbjct: 61 LKGYIRAYARQVGLDGNALIADLNRELEPMREEQAQAKAANPLIDIERRRCKKRRVAKTA 120 Query: 117 TWLVLFVVIG---------------LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQG 161 WLV V+G L GA + AQQ + + + + + +S Sbjct: 121 FWLVALAVLGFLIFAFIYSPSQLANLPGAGAFTGDTAQQNALESGLNGAVSSTDDDSTTQ 180 Query: 162 QSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTA 221 + T S PA+ + + P + SPSQ + Sbjct: 181 STPDNFLPNETSDGDVSASPANAEGALEPLIAAGTGTFSDGEAPADGSGSSPSQTVGNLT 240 Query: 222 ATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQR 281 A +T AP D + L + F DCW+++ DA G+ L SG++R Sbjct: 241 AIVDNDLSTLDAEEAPQVAD---------NRGRLEIEFIDDCWVQIRDAYGRSLASGLKR 291 Query: 282 KDGNLNLTGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTL 329 + ++L + +L IGA A+ ++++G PVDL A L Sbjct: 292 QSDRIDLRSETDIRLVIGAANAIGAMRFEGAPVDLGSKGIVGNRAEFVL 340 >UniRef50_Q3SL71 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL71_THIDA Length = 291 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 130/321 (40%), Gaps = 37/321 (11%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 LT G LR ARE G++ + RL L V +E D A F RG++R+YARL Sbjct: 6 QLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVRNYARL 65 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + E LL +E AP A+V+ + +R W++ +VL V+ G + Sbjct: 66 LGLAPETLLASMEG-APAAPAEVS--YAKPPLQRPWFASSWVILLALVVLVVLAVPVGLY 122 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 W + + E GQ + TT A S+ P Sbjct: 123 LWLNSDVE-------------------EGGQRQVAVSQPTTAGAAPSSAP---------- 153 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP--LPTDQAGVTTPV 249 PA APA P +P + N T T A P + P D T Sbjct: 154 --PATRGEAPAETPGAPNAPAPVEGNGATDGTTADGTVAVPPQSPPDEAAEDAGSTTEAS 211 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 AL + F A+ W E+ DATG+ + + ++ + G+ P+KL IG A ++ Y Sbjct: 212 TGGAALHLEFGAEAWAEIKDATGRAVLRQLNPAGSSVEVKGEPPFKLVIGNAAETRLTYN 271 Query: 310 GKPVDLSRFIRTNQVARLTLN 330 G+PVDL VAR TL Sbjct: 272 GRPVDLKPHTGMT-VARFTLE 291 >UniRef50_Q47BR5 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BR5_DECAR Length = 311 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 115/320 (35%), Gaps = 31/320 (9%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G +LR ARE L +A L L V +E TF+RG++R+YARLV Sbjct: 21 MPVGEQLRLAREARDLEVADIARTLKLGPRQVEALECGDWHGLPGQTFIRGFVRNYARLV 80 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG--WLMTFTWLVLFVVIGLSGA 130 + L+ L Q + A MQ G LV ++ L+G Sbjct: 81 QLDPAPLMLQLN-QVLEKPADNLAMQEARPASMPNSGSGVSRRDRAVVLVGAGLVALAGL 139 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 ++ A+LS+ E QS+ + + P + P Sbjct: 140 VYFLM---------------PADLSALRESTQSLLDSLARKEVPTSAPAP---------- 174 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 T+ PA +P + Q PA + A + + + A Sbjct: 175 --ASEGTSAVPASEPVFPPGATQQQVMYPQVLAPAESPAPSSATPQKAESSPSQPAVTAA 232 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 D + F + W+EV D K +FS ++GQ P L +G V++ + G Sbjct: 233 DQPQMRFIFDKESWIEVRDRDNKIIFSQRLGAGAEQVVSGQGPLSLTVGYAPGVRLFWHG 292 Query: 311 KPVDLSRFIRTNQVARLTLN 330 + VDL + VARL L Sbjct: 293 QAVDLVPHTK-GDVARLVLE 311 >UniRef50_B8GTN5 Transcriptional regulator n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTN5_THISH Length = 325 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 82/327 (25%), Positives = 129/327 (39%), Gaps = 16/327 (4%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 GA LR ARE GLS +A RL L V + D+E D+ + ++RGY+ Sbjct: 11 QEPVRRVPGPGAELRRAREAAGLSTGELASRLHLGVGLIEDLEGDRYDSLPQPAYVRGYL 70 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV- 124 R+ AR ++I L+ + Q P G R + +L +V Sbjct: 71 RAAARALNIDAAPLIEAYDAQGLSEPKLDVPPAVARSGVAPANRGHRRAPYLLGLLILVA 130 Query: 125 -IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 GL W++ + D + + L T +P + P A+ Sbjct: 131 LAGLIAYGWFEGQ-----------DVLTGARDEEPTTRAPLALQTPAPPEPVLRAEPDAA 179 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + A P + A + P+ + V A + A P A A Sbjct: 180 IPDAAIPETRPPLAGDAEPLLPETHMPVEEPPA---ASLPVPTPAPPPPAPRAQPAPAPA 236 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 T P A+ + LV+ F D W+E++DA G+ L G+ R+ L G PY++ +G Sbjct: 237 PATPPAANGSVLVLRFAEDSWVEISDARGESLLVGLMREGTERRLEGVPPYRVFLGNAPG 296 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLN 330 V+I++ G D +R RT+ AR TL Sbjct: 297 VRIEHDGSSYDAARHARTDNTARFTLE 323 >UniRef50_B0KPI6 Transcriptional regulator, XRE family n=22 Tax=Pseudomonadaceae RepID=B0KPI6_PSEPG Length = 344 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 88/332 (26%), Positives = 140/332 (42%), Gaps = 16/332 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G LR ARE+ SQ VA +L L VS++ +E TF RGYIR+YA+L+ Sbjct: 15 NPGELLRLAREKRDWSQAEVARKLNLTVSSLNHVETGAFDKLPGHTFARGYIRAYAKLME 74 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + + L+ ++ AK + + S + + ++ L+L V + G WW Sbjct: 75 LDQAALVEAFDRYTG-THAKGSEVHSLGRIEEPVRLSHNILRGVSLLLLVAVVGGGFVWW 133 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTST---TTDPATTSTPPASVDTTATN 190 QD+ + + + E+ S Q PL+ + + P +++ AT Sbjct: 134 QDQGSLRGKDLAKIALEHVEVESADGTTQIHPLDEPEDQAVSVGQQAESAPLALEQGATE 193 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD--------- 241 A + P AV +P+ A A P P Sbjct: 194 QPAAAAEQAPTSAAPAAAAVPAPAAGQQAPAQPAPAAAPAPVAPVTPAPAAVAPAAPAST 253 Query: 242 --QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 A A + + FTADCW +V+D GK LFS ++RK NL LTG+ P+ +++G Sbjct: 254 VVAAEPAAIPAGSAKVAIQFTADCWTQVSDGNGKVLFSAIKRKGDNLELTGKPPFAVRLG 313 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 Q+ Y G+ VD++ F + + ARL L Sbjct: 314 FARGAQVSYNGQAVDVAPFT-SGETARLKLGQ 344 >UniRef50_C6NZ97 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ97_9PROT Length = 344 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 129/343 (37%), Gaps = 27/343 (7%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 E L G LR REQLG+S +AER+ V +E + FLRG Sbjct: 13 ENISPLQSKLDVGLTLRQTREQLGMSVHDIAERIKFAPRQVEALEANDFEHLPEPAFLRG 72 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 ++RSYAR++ + + L+ L + + + R +M WLV + Sbjct: 73 FVRSYARVLQLDDVALVASLPSAPGKQVTIKTQAVNVPFPTLQSLRRINVM---WLVGAL 129 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTST---TTDPA----- 175 + L W+ K + S L +E S P +T +PA Sbjct: 130 GVALVLGWFVLMHKVDTTVKSAKVVVESVPL-PATETAVSAPADTGAQPVAAEPAGIIER 188 Query: 176 ------TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA 229 + P +AT T+ PA +P++ + + + + A P AA Sbjct: 189 EKQHASVETAEPEKRHESATATEADKTAKPAKVAEPEKKPEPAKIKQH-EVKALPQIDAA 247 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT 289 + P A + + + L FT W EV D+ G L S + + Sbjct: 248 SAPAVAV-----KTEIPLEILKRRPLHFVFTESAWAEVIDSHGAVLLSRNNPRGTEKWIG 302 Query: 290 G--QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 G PY + I P V++ Y+G+ VDLS + + VA L + Sbjct: 303 GPRHEPYDISISHPEHVKLYYRGQEVDLSAYAGMD-VAHLKVE 344 >UniRef50_C4KCN7 Transcriptional regulator n=1 Tax=Thauera sp. MZ1T RepID=C4KCN7_THASP Length = 322 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 76/307 (24%), Positives = 122/307 (39%), Gaps = 15/307 (4%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 G S A + L + +E D A F+RG+ R+YAR + + LL G+E Sbjct: 28 GESVHEAAFAIKLSPRQIEALENDDFAALPGMAFVRGFARNYARYLGLDATPLLDGIEHL 87 Query: 87 APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTM 146 A ++P+++ G G +F V+ ++ + W + E + + Sbjct: 88 AGAGQPDLSPIRNAD-GDLPAGGGGRRGSFPAGVVVALLLVLLGVGWYFDWFRTEPLPGL 146 Query: 147 ---ADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAV 203 + + A + + +E G + P + PA + + AV A P Sbjct: 147 ELQTEPAPAFMPAPTEGGGAAPATSEPVATPAPLEASAPAAPHASPVAIPAAVGAGVP-- 204 Query: 204 DPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADC 263 V+P A + +A +P +P V A N L F D Sbjct: 205 -------VTPLAAPASATPPASASAIVSPVVQSPAQAA-TPVAEEGAGGNRLSFRFGGDS 256 Query: 264 WLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ 323 W+EV DA+G L SG R + + G P++L +G A V ++ GK VDL+ R Sbjct: 257 WIEVRDASGTILHSGTNRAGSSRVVQGTPPFRLVVGNSANVVLEQDGKAVDLAAHTR-GS 315 Query: 324 VARLTLN 330 VARLTL Sbjct: 316 VARLTLP 322 >UniRef50_C8NBB0 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBB0_9GAMM Length = 311 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 73/336 (21%), Positives = 131/336 (38%), Gaps = 39/336 (11%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + AL GA L AR + LS A + L + +E+++ A F RGY Sbjct: 3 EKTNTTGALDIGAVLSAARMKRDLSIATAAMQSNLSQEIIERLEQNRFAEIGAPVFTRGY 62 Query: 65 IRSYARLVHIPEEELLPGLEK----QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 + YAR + + E + K AP A ++S + RR+ G +WL+ Sbjct: 63 LGLYARFLGLNEAAVSQAFNKIKSEPAPELRLTAANIESQARPYRRRSYLG-----SWLL 117 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSS----NSEQGQSVPLNTSTTTDPAT 176 L V+ + G +Q +T + +A +S +E G + N T Sbjct: 118 LIPVVAIGGILLYQLFDNNSWLMTQINGAFNAPQASGETTPAEGGSANSGNEIVLEVGGT 177 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 +P + + + P +T P P ++ + S+ +T A+ P A+T G Sbjct: 178 PLSPEGTPLSPESAQNIPGLTPP-----PASDSSATNSEQGAETPASDTPPASTANRG-- 230 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG-QAPYK 295 + ++F+ + W+E+ D+ KK+ S + + + L APY Sbjct: 231 ------------------IQLSFSVESWIEIKDSGNKKVLSKLVKAGEKIELPADGAPYN 272 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 L +G P V + G+ L + + N R ++ Sbjct: 273 LNLGRPDGVVMLINGQEQPLENYRQKNSGRRFNVDV 308 >UniRef50_C4GFD8 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GFD8_9NEIS Length = 280 Score = 174 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 116/323 (35%), Gaps = 59/323 (18%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 N+A G LR REQ LS V+ERL L + +E + F+RG++RSY Sbjct: 13 TNKATELGILLRAKREQKQLSIGEVSERLKLPARQIEALENGDYNSLPEPVFVRGFLRSY 72 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 R + + E L LE P + A SL + T+ + ++ V I Sbjct: 73 GRFLDLDESTLNDALENVVPSEKVRKAIQHDGSLNFANETPKRPFPTWIFGIIGVAIIGF 132 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 G + WQ + S E ++ ++ +S PL S T PA Sbjct: 133 GVYKWQTK-------------SQTEHANAKQEAESKPLIASETAKPAL------------ 167 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 N VV P A+ T P +A P Sbjct: 168 ----------------DNPNVVVKPMTASDTQTQTATPASA------------------P 193 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 LV+N L VT+A G+ L + + AP+++++G + + Sbjct: 194 AGVAGELVINARYRTMLTVTNAKGEVLINEIVPARSEHRFQNGAPFEVRLGYASGSTATF 253 Query: 309 QGKPVDLSRFIRTNQVARLTLNA 331 G+P+D++ + + A T A Sbjct: 254 GGEPIDMNAARKNGKTATFTAGA 276 >UniRef50_Q0AE41 Putative uncharacterized protein n=2 Tax=Nitrosomonas RepID=Q0AE41_NITEC Length = 358 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 119/319 (37%), Gaps = 35/319 (10%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR-LVHI 74 G RLR+ R + G++ VA RL L + IE A+ FLRGY+R+YA L Sbjct: 71 GQRLRDERIRRGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFLRGYVRNYANLLQLD 130 Query: 75 PEEELLPGLEKQAPLRA--AKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 L+ + + P + P Q F + + D + L + V++ A+ Sbjct: 131 DTTLLVEAVPQSRPADSVFTSKNPSQRFKAIEPVYQSDRGGRSGWLLYVAVILAAFAAYG 190 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 + + ++ M ++ + Q S N D A +P ASV + Sbjct: 191 FYHEEIPEKMAPYMLNEGDQVI-----QSGSSSENDQVAIDLALPLSPTASVSSPMAP-- 243 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 PA + + + P A PD Sbjct: 244 --------PASASVNLPPAAAVLPALPAPSAPVADTAKAPDN----------------GK 279 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 +L F+ D W+++ D+ G+ + + + + G+ P L IG A V + Y G Sbjct: 280 KSLHFVFSKDSWVKIKDSNGQIILEKINSRGTEQTIEGEPPLYLVIGNAAGVSLTYNGHK 339 Query: 313 VDLSRFIRTN-QVARLTLN 330 VDL+ + R N VAR +L Sbjct: 340 VDLAPYTRGNDDVARFSLE 358 >UniRef50_B2U9U8 Transcriptional regulator, XRE family n=6 Tax=Ralstonia RepID=B2U9U8_RALPJ Length = 360 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 138/324 (42%), Gaps = 12/324 (3%) Query: 17 ARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPE 76 RLR RE+ L+ +A RL + + +E A TF +G +R+YAR + + Sbjct: 39 ERLRAGRERQRLTVDDLATRLKVAPGKLLAVESADVSALPDMTFTKGLMRAYARALQVDV 98 Query: 77 EELLPGLEKQAPLRAAKVAPM----QSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 ++ + L +AP+ + P +SFS KR G + L VI +GA Sbjct: 99 DDQVARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGNGRWLIGALVAVIVAAGALA 158 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPATTSTPPASVDTTATNT 191 DR Q T A Q++ + + Q+ P + T+ A + TP AS+ T T Sbjct: 159 GMDRLKQWFATQTAATQNTESTAKETPAAEQTAPAQVAPATEQAPSETPAASMPTPLTPV 218 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG---AAPLPTDQAGVTTP 248 TPA A P P N A A P AP+ P Sbjct: 219 -TPAAPASGVVTAPLAPPPTLPRSDNGAVPAPAVAAAGGKPAVINVEAPVAALPTEAAKP 277 Query: 249 V-ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-I 306 + ++ + F+ W E+ D TGK L SG+ ++ +LTG P+K+ G AV+ + Sbjct: 278 AESGGGSVSVRFSGSSWYEIKDKTGKTLASGISKEGDARDLTGTPPFKVVFGNAGAVESL 337 Query: 307 QYQGKPVDLSRFIRTNQVARLTLN 330 G VDL ++ R N+VAR TL Sbjct: 338 AVGGATVDLQKYAR-NRVARATLP 360 >UniRef50_C8PVJ8 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVJ8_9GAMM Length = 302 Score = 173 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 51/335 (15%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N+ HD + L G R + ARE+ GLS VA + + S +R +E + A TF Sbjct: 12 NSTPVHDTTQLL--GQRFKQAREKKGLSIDDVAAKTFILKSHLRALEANDFDALPQPTFA 69 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKV------APMQSFSLGKRRKKRDGWLMT 115 RG+ +Y R + + + + + Q P + APMQ R + + Sbjct: 70 RGFATTYGRFLGLDKNLVAQSFDAQYPATLKQKYATVINAPMQPMGTLNREARPSVRINP 129 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 F + +V+GL+ + + KA + + + A + P Sbjct: 130 FVIGGILLVLGLAIFIFNKVSKAHNDSVDQAPASAVASM-------------------PT 170 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 AS++ + T VTA + PA +A T Sbjct: 171 QDQVSGASLNNAGSAIVTNTVTA----------------------SGLPATGSAITGVAV 208 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + T ++ + + + DATG + G Q + LTGQAP++ Sbjct: 209 SADNASGTAATGQAGAKASIDIFVKDTTKITIVDATGNTILDGDQARGS-YQLTGQAPFQ 267 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + I + V + +P+ LS + + ++ A TL Sbjct: 268 VNIDKASNVSLDLNKQPIKLSNYAQNDK-ANFTLK 301 >UniRef50_B5JY14 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY14_9GAMM Length = 327 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 81/341 (23%), Positives = 136/341 (39%), Gaps = 27/341 (7%) Query: 1 MNTEATHDQNEAL--------TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA 52 MN E+ + E + G LRNAREQ +S ++++L L ++ +E + Sbjct: 3 MNQESETESVEMEPEQQVRYDSVGDTLRNAREQQQISAVDLSDKLKLSTQLIQALESEDF 62 Query: 53 PADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW 112 A A TF+RGY+R+ + + + L+ + P + S S R++ Sbjct: 63 DALPAPTFVRGYLRAIGSELGLDTDALVEAYSNRVP---EDELALSSTSTAARQRSSKDP 119 Query: 113 LMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT 172 LM ++ + + VV+ + W Q++ A+Q + SE Sbjct: 120 LMVWSTVAIVVVLTVLVVVWSLGFFPGQDKPEPQANQEVEQQQPESESD----------- 168 Query: 173 DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 A P + ++T +A +P + S D T + A Sbjct: 169 --ADQGLPDIQIQLEESDTAATGNSAAVAPSEPVDSESESEPSVTADADDTESEEATQEA 226 Query: 233 DGAAPLPTDQAGVTTPVA--DPNALVMNFTADCWLEVTDATG-KKLFSGMQRKDGNLNLT 289 A L T+Q P A + LV+ T W EV DA +F + ++ L LT Sbjct: 227 SSAPTLSTNQVATIHPEAPVGDDTLVLTMTGSSWAEVKDANEYAHVFGTIGPRNSPLRLT 286 Query: 290 GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 G+AP+ L +G V I Y + D S +IR+N VA+ + Sbjct: 287 GKAPFDLFLGDARQVAITYNDRSFDHSSYIRSNNVAQFRVK 327 >UniRef50_C7LQ79 Transcriptional regulator, XRE family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQ79_DESBD Length = 314 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 115/312 (36%), Gaps = 15/312 (4%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + + G LR REQ GL+ +AV E+ + S + +EE + + + RG++RSYA Sbjct: 2 DLIEIGTALREGREQKGLTVEAVEEKTKIAPSVIIALEEGNSARFPHAVYARGFVRSYAM 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 L+ + +EL ++ P+ P + G ++ +V + I + GA Sbjct: 62 LLGLDAQELCAHFSREYPVPKDTDQPDSHAPQIHVKMHDSGNVVVTVRIVAILGILILGA 121 Query: 131 WWWQ---DRKAQQEEITTMADQSSAELSSNSEQGQ--SVPLNTSTTTDPATTSTPPASVD 185 W +++ E + +A + +E S+P + + A T + + Sbjct: 122 LGWYVFDHYRSRASEAPAPVGEQTAPPAPPAEVLPSGSLPAPLTQMQEVAATPAEQPAAN 181 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 TA+N A+ A A V D A P P A P T A Sbjct: 182 MTASNASEEALNATAGVSSFAATEAV----PGQDPVAAPEPVVAAEPAAQTETVTASAAS 237 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 A + + + WL+ ++ RK +T +K G V+ Sbjct: 238 ----AGERTMRIVAHSASWLQAR--PDDRILDYFLRKGETTTITFSESLSIKFGNAGGVK 291 Query: 306 IQYQGKPVDLSR 317 ++ G+P Sbjct: 292 LELDGQPYPFEG 303 >UniRef50_Q1LLJ0 Transcriptional regulator, XRE family n=2 Tax=Cupriavidus RepID=Q1LLJ0_RALME Length = 351 Score = 171 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 147/344 (42%), Gaps = 31/344 (9%) Query: 5 ATHDQNEALT--TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 AT EA+ GA+L++ARE LS + V+ RL + S + IE + TF + Sbjct: 21 ATDSDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAASKLVAIESGNVSSLPDVTFAK 80 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRA-------AKVAPMQSFSLGKR---RKKRDGW 112 G +R+YAR + + + LL QA + A Q+F KR + G Sbjct: 81 GVMRAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGALNQAFDDRKRFGSKGTGGGA 140 Query: 113 LMTFTWLV-LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSN---SEQGQSVPLNT 168 + WLV + +IG+ G + + KA E + A ++ + EQ + + Sbjct: 141 GGRWVWLVCVLALIGVGGYFGFDHAKAWVEARSKAAAEAPKPAVAEERAQEQSNNDGTVS 200 Query: 169 STTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 + T + PA +T + + PAPA +V+ +A + A TP A Sbjct: 201 AALPPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGLPMVTGGEAPAEAAKTP---A 257 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 AT P D AG A+ + F+AD W EV D TGK + G + ++ Sbjct: 258 ATPPATVPAAQGDSAG---------AVQIRFSADSWYEVRDRTGKVILGGTAKAGDTVSG 308 Query: 289 TG-QAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 G PYK+ +G V+ + + G V+ R N VARLTL Sbjct: 309 GGAGGPYKIILGNVKGVESLTHNGAAVNFQASNR-NNVARLTLQ 351 >UniRef50_Q0A987 Transcriptional regulator, XRE family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A987_ALHEH Length = 325 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 84/328 (25%), Positives = 127/328 (38%), Gaps = 36/328 (10%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G L ARE GLS++A A+ L L + T+ +E D TF++GY+R+YA+L+ Sbjct: 23 TPGQLLARAREARGLSRKAAADALNLPLRTLEALEGDDYDNLPPLTFVKGYLRAYAQLLE 82 Query: 74 IPEEEL---LPGLEKQAPLRAAKVAPMQ--------SFSLGKRRKKRDGWLMTFTWLVLF 122 I + L L L+ + P A+ P Q S G + +R + V+ Sbjct: 83 IDSDRLREALARLDLERPASGAQQQPGQGSTSVTGGDTSRGGLQGRRLRGWLLGVSSVVV 142 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + AW W D + ++ + D T P Sbjct: 143 AAVIAVLAWLWLVENGVS------GDSEAPPVAEEGTAPSEEAPAEAVVADELAERTLPE 196 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 +VD P T +V V P A P P Sbjct: 197 AVDEVVPEASVPDDTGADVSVPETLEPPVVPE------------------VEAEPEPAVA 238 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 P +P LV++ + WLEV D G++L G + + L G+ P+ L IG Sbjct: 239 EPEPEPAPEPAGLVLHISGTTWLEVRDEDGERLMVGNYQGEETHQLQGEGPFALVIGNAD 298 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 AV++++QG VDL+ R VARLT+ Sbjct: 299 AVRVEFQGDAVDLAPHTR-GNVARLTIP 325 >UniRef50_C5BLW0 Transcriptional regulator, Cro/CI family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLW0_TERTT Length = 313 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 90/342 (26%), Positives = 141/342 (41%), Gaps = 45/342 (13%) Query: 3 TEATHDQNEALT---TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 E T D +L GA LR R + GL +AE+ + ++D+E+D A T Sbjct: 4 EERTTDYRASLAEGKPGAALRIVRLEAGLPLSKIAEQTLIPEWKLQDLEDDTYDRIGAKT 63 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFS----------LGKRRKKR 109 FL GY+R YA L+ + E + L +Q + VAP QSF+ ++ Sbjct: 64 FLNGYVRKYASLLKLDASEFVGALPEQM---RSNVAPAQSFTETAANATAPKPRAKKSGT 120 Query: 110 DGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS 169 L +V + ++ +D E T+ S+ N E+G P++++ Sbjct: 121 KRRLPVIPVVVFLIAAWAIAVYFIEDVGPGDNEAGTVEAASNIGELPNDEKGAP-PIDSA 179 Query: 170 TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA 229 T D SV P AP V Q+ A+ + SQ D+ Sbjct: 180 DTEDRGDFDG-DTSVQEIPVLLDLPEADL-APVVATQEPALEAESQVTPDS--------- 228 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT 289 T + L F DCWL+VTDATGK +F+ +Q K NL L Sbjct: 229 ----------------TDATPSQDRLNFTFNDDCWLQVTDATGKVVFAQLQTKGDNLQLF 272 Query: 290 GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 G++P+ + +G AV I+ G PVD++ + R T+++ Sbjct: 273 GESPFSVMLGNARAVAIELNGAPVDINPVSNR-KTLRFTVSS 313 >UniRef50_Q2LVM8 Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVM8_SYNAS Length = 300 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 115/330 (34%), Gaps = 30/330 (9%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M +E D + T G+ L+ ARE GLS + V E+ + VS + IE D+ + Sbjct: 1 MGSE--QDNEDLKTLGSGLKTARESKGLSLKDVNEKTRISVSILDAIENDRFHLLPPGVY 58 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 R +IR+YA + + +ELL K+ A V + +R W + V Sbjct: 59 TRNFIRTYADFLGVDSQELLDHFTKEREQTAPPVLQKDDADISAVNHRRY-WKVFAIGAV 117 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 ++IG+ W + S+ + +++G + D A S Sbjct: 118 ALILIGVLV--WSLNSCWYAGN-----SAISSFIGEKNDEGPIPQVKLPNRDDGAVNSDK 170 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + ++ T A+ Q + V + + + A G Sbjct: 171 GLFIPAASSRTLPDALRPEIARPVNLQQSTVQDVYPRISASIPDSEQKAEENSG------ 224 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 LV+ WL++ G + +N T + + L IG Sbjct: 225 -----------RYQLVIEAKERTWLQIRADDGAAS-QVILNPGERINRTAREHFILDIGN 272 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A V + +QG+ L + QVA L L Sbjct: 273 AAGVSVSFQGRK--LENLGKRGQVAHLRLP 300 >UniRef50_Q608X3 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q608X3_METCA Length = 294 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 113/301 (37%), Gaps = 43/301 (14%) Query: 30 QQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPL 89 VA L L V TV +E D + F+RGY+R YARL+ +PE+E++ + A Sbjct: 32 IDKVARELHLSVGTVGALERDDYASLPPPAFVRGYLRGYARLLGLPEQEIVDAYNRVAG- 90 Query: 90 RAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQ 149 + G+ W V++G++G W +Q ++ Q Sbjct: 91 -GGSDPEPGAVVRGQSEASPTSWFGPLG----LVLLGMAGIWGYQHWRSSQ--------- 136 Query: 150 SSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNA 209 + E V L+ +PA T + A T PA Sbjct: 137 ------ISGEAPSPVELSEPVPVEPAVNGTAMPGREEVAPPTGGPA-------------- 176 Query: 210 VVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTD 269 VS A D +PA + + Q V + L ++F+ + W VTD Sbjct: 177 PVSNPMAAADALGSPAASPYPSTQPQPSPQPLQPEV-------DTLTLSFSGESWASVTD 229 Query: 270 ATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 A GKKL + + G+AP+K+ +G PA +++ G+ D + AR + Sbjct: 230 AEGKKLLFENVTEGQVKTVQGKAPFKITLGRPADTHLEFNGQAYDHG-YKTNRTSARFIV 288 Query: 330 N 330 Sbjct: 289 P 289 >UniRef50_B5EJF2 Transcriptional regulator, XRE family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJF2_ACIF5 Length = 326 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 119/316 (37%), Gaps = 55/316 (17%) Query: 17 ARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPE 76 LR ARE G S + VAERL + + V+ +E+ A + F RG++++YARL+ + Sbjct: 11 QDLRAAREAHGWSLRQVAERLHITEAQVKGLEDGDYTALPGAAFARGFLKNYARLLGLDP 70 Query: 77 EELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDR 136 E LL + + + ++ F+ L++ VI AWW Sbjct: 71 EPLLKTYDASNEGSGLHPSETVLPASEGPLLDYSRRVLIFSVLIVISVIA--VAWWVWSH 128 Query: 137 KAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAV 196 + Q T A+ + S + ++ + S PPA+ Sbjct: 129 QQLQGLPVTAVSPMVAKHPAASAKVVTIAPSVSAAASVPAIGNPPAA------------- 175 Query: 197 TAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALV 256 + A PA +A VA L Sbjct: 176 -------------------PGLPVAPVPATRSAA------------------VATGPGLT 198 Query: 257 MNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQAPYKLKIGAPAAVQIQYQGKPVDL 315 F+ADCW++V D+TGK L + + + L + +G PY + +G +A+ I Y K V L Sbjct: 199 FQFSADCWVQVKDSTGKTLLAVLGHRGDVLRVDSGTPPYNVLVGKASAITISYDDKSVPL 258 Query: 316 SRFIRTNQVARLTLNA 331 VARL + A Sbjct: 259 PA--NALGVARLQIGA 272 >UniRef50_C5TVA8 XRE family transcriptional regulator n=3 Tax=Desulfovibrio vulgaris RepID=C5TVA8_DESVU Length = 313 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 118/320 (36%), Gaps = 13/320 (4%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR RE G S VA RL + +R IE+ + + RG+I++YA ++ I Sbjct: 6 LGLMLREEREARGFSLDLVATRLKVSARILRAIEQGDVDDLPHAVYARGFIKAYASMLGI 65 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 + ++ P + +++ + + R L L + +W+ Sbjct: 66 TPGIVAEVVDSVYPCEIQEDL-VENPGVVEPVSGRGRRAGVLLTLGLVACGLMFAGYWYY 124 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 +K+ +E++ + + + + + P +T + P PA A + P Sbjct: 125 KQKSAREQMPAVTGTAPFVEPAPQQVVPAPPTSTEESVPPTVDGAVPAVPAAGAADGAKP 184 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 P + S S +P P + P D AG P A + Sbjct: 185 VAPE-----QPVTASNASSSAMADKLLGSPTPEQKAK-EVLVPQQGDDAG-ALPPAGKHR 237 Query: 255 LVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 +++ A+CW+ T D + FS RK LT LK+G V +++ GK Sbjct: 238 IIVTAVAECWVHSTADNADVRQFS--LRKGETFALTFSRSLSLKLGNAGGVNVRFDGK-- 293 Query: 314 DLSRFIRTNQVARLTLNAEQ 333 D+ QV LT + Sbjct: 294 DMGAPGEPGQVKTLTFPPSE 313 >UniRef50_C5V4P9 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4P9_9PROT Length = 299 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 79/330 (23%), Positives = 129/330 (39%), Gaps = 56/330 (16%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + EA + + + G LR ARE +G+S V ++ L + +E D + FL Sbjct: 25 SQEAAVVEQASPSVGCILRTARESMGMSIDDVVVKIKLAPRQIIALEADDFQVLPETAFL 84 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RG++RSYA+L+ + + LL L + + + K ++++ L++ LV Sbjct: 85 RGFVRSYAKLLQLDAQPLLDALPGAVVVNTVQAKVEEPLPTEKTSRRQNINLLSAALLVT 144 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 V+I + AW +T P Sbjct: 145 -VLIAVFAAW-----------------------------------------QNSTPQQPV 162 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 A++D A++ P D + V S +D AA ++P A Sbjct: 163 ATIDLAASDVA------SLPMPDQVEMLVASEVSEVIDVAA-------SSPVVAPVSMVM 209 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A +AL + F + W E+ D +GK L + L + G APY + IG Sbjct: 210 SASTVAAAKTVSALRLVFDKESWAEIKDQSGKVLARQVNAPGSELRVEGVAPYTMVIGHA 269 Query: 302 AAVQIQYQGKPVDLSRFIRTN-QVARLTLN 330 +AV + Y KPVDLS ++ VAR+TL Sbjct: 270 SAVHLFYGEKPVDLSSYVNAGSDVARVTLE 299 >UniRef50_C1DD42 Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD42_LARHH Length = 302 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 77/337 (22%), Positives = 125/337 (37%), Gaps = 42/337 (12%) Query: 1 MNTEAT-HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M++E + + G L N R + G+S Q VA+++ L + IE D T Sbjct: 1 MSSEVNPQPSSPLQSAGVVLSNERIKRGISIQEVADQIKLSRKQIEAIEADAYDRLPGPT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLR-----AAKVAPMQSFSLGKRRKKRDGWLM 114 F RG++R+YAR + + LL +++ P VAP++ +R Sbjct: 61 FARGFVRNYARFLGLDPVPLLAWMDQNLPSTAVAAHPEPVAPVEPQPEMPQRPAPGSSKR 120 Query: 115 TFTWLV-LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD 173 L+ V++ GA W A ++ A Sbjct: 121 GSGRLIGGLVLLAAIGAAGWALFGAIRQPSMPQA-------------------------- 154 Query: 174 PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 A V + AT PA A + AV P+ A A P Sbjct: 155 --------ALVPSEATAEAEPAPPTEEAADPQVEAAVTEPAAPAPAEPAAAPAEPAPAPA 206 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAP 293 + P D A TT + + + + W+ +TDA KL G +++G+ P Sbjct: 207 ASTPASVDTARPTTTDSAAAGIRVQARQNAWVSITDANDDKLVYGEVTAGSERSVSGKPP 266 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Y++ IG Q+ + G+PVDL+ + A+LTL Sbjct: 267 YRIVIGNAQHAQLFFNGQPVDLASKTK-GSTAKLTLE 302 >UniRef50_Q1ZDU0 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZDU0_9GAMM Length = 305 Score = 163 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 53/337 (15%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADL----ASTFLR 62 + L G L+NAR Q S Q V E+L + + + +IE + +LR Sbjct: 7 SSDKQNLPLGQALQNARMQREFSVQDVVEKLNIHKNIIENIEFSVEKILEEKKCSPIYLR 66 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAK--VAPMQSFSLGKRRKKRDGWLMTFTWLV 120 GY+ ++ARLV + + + + LR K +A F+ + + G + F+ LV Sbjct: 67 GYLVNFARLVGLDDLDTFEEFTSLSALRKEKKVLAKPSLFTPALNKSQHTGAI--FSTLV 124 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + ++ L +W Q + +I Sbjct: 125 IMLLGALIVNYWQQIYDFSKFDI---------------------------------NINN 151 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDT-AATPAPTAATTPDGAAPLP 239 +D A A+T P VD ++ V PSQA+ + AP T + + Sbjct: 152 SVELDEQAREIHNMAITIP---VDNIEDESVVPSQADEKSLVKESAPIQKTEQSLKSEVS 208 Query: 240 TDQAGVTTP---VADPNALV---MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAP 293 A TP V + LV + ++ADCW E+ DA K++ G+ ++ L L G+ P Sbjct: 209 VKVANKETPKDIVENKPLLVSMSLTYSADCWTEIKDAKNKRVAFGLYKRGRVLTLQGEPP 268 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++LK+G P+ V+IQYQ + L + + A L Sbjct: 269 FQLKLGDPSVVEIQYQNEI--LKNNFESGKSAVFVLP 303 >UniRef50_A6GNU8 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GNU8_9BURK Length = 367 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 122/334 (36%), Gaps = 28/334 (8%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G LR ARE+ G S ++ + + + IE TF + +I+SY + + Sbjct: 45 NPGEILRVAREKAGYSLSDISAQTKINERQLEAIESGDVGRLPPETFAKAFIKSYCKALK 104 Query: 74 IPEEELLPGL-----------------EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF 116 + ++ + P P S L R + Sbjct: 105 MDPAPVIMSFGFSEASAQVKAARSGQADSGRPEPLEPKMPNSSKRLSTLNFDRKTGKKSL 164 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 ++ ++ + + ++ + QE A+ AE+ +E V + Sbjct: 165 SYGIVLAAVVVMAVFYIPVFMSGQE-----AEVVDAEVIEPNEA--PVSTAPGAESAVPA 217 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 + P S+D A T A V P+ + S + A +A + TP A Sbjct: 218 DGSLPLSLDPPAAAGDTSVFPALQQPVTPEGESAPSAAIAPSSSAVVGST---ATPPLAE 274 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 A + L NF W+ V DA K L S + NL + GQAP+KL Sbjct: 275 TTAPAAAAASAASGGEGLLRFNFQEQSWVTVRDANDKVLISQLNDGGSNLEVKGQAPFKL 334 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G AV + GKPVDL+ IR +VAR+T+ Sbjct: 335 IVGNAKAVSVSSNGKPVDLTSSIR-GEVARITVQ 367 >UniRef50_C0EJV6 Putative uncharacterized protein n=4 Tax=Neisseria RepID=C0EJV6_NEIFL Length = 294 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 72/328 (21%), Positives = 118/328 (35%), Gaps = 53/328 (16%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N + +D A T G LR R + Q VA RL L + +E+ + F+ Sbjct: 4 NDKINYDTQAAKTLGDELRKHRTDAKIDIQDVASRLKLSTEQIDALEKGEYSGFPGLVFV 63 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKV-APMQSFSLG-----KRRKKRDGWLMT 115 GY+RSYAR + I E+ + L P V A +S + G ++ W++ Sbjct: 64 SGYLRSYARFLKIDEQTIAKHLLSITPQLEDHVYAVTRSANTGLSYTDTEKQGFPKWIL- 122 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 + + + + G ++WQ + + + E + + Sbjct: 123 ---GIAALALAVGGVYFWQSKSSFENEQANIQNSKDVA---------------------D 158 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 T TP D A + T D ++ P AN D AA+ A A A Sbjct: 159 TMKTPALKTDNVAVSEMTE---------DGKKEITNKPEVAN-DQAASEASAVAQEEKPA 208 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + D+ L + L +TD GK +FS + L G APY Sbjct: 209 VKVEKDE------------LWIKVQYRSNLIITDKDGKVVFSRIVPAGSEQRLRGGAPYN 256 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQ 323 + IG A + Y G P++ ++ + Sbjct: 257 VWIGIAAGSEANYGGTPIEPLKYRVAGE 284 >UniRef50_Q0VND9 Putative uncharacterized protein n=2 Tax=Alcanivorax RepID=Q0VND9_ALCBS Length = 301 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 25/317 (7%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G R R ARE G++Q A+RL L ++ ++ ++ D +TF++GY+R+YARL+ + Sbjct: 9 PGERCRRAREAQGMTQTEAAQRLHLSLTYLQSLDADDYERLPEATFVKGYLRNYARLLGL 68 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 P EE+ +Q A P+ S+ WL + VV+ +W Sbjct: 69 PAEEIAGTF-QQMVNEDALDKPLLLPSIAPPPAA---WLKPLLIALALVVLVSLLWAFW- 123 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + E+ + D+ E+S SE N A A V A+ T Sbjct: 124 ---PSKGELPALPDKVQ-EMSQQSEAEADASNNDMGVQRQAQFDDEMAGVTQGASLNGTD 179 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A P + + ++ D D + Sbjct: 180 ATDEGRPQAAAESISDITTEDVGNDDGQL--------------QNNDDVSSMLAANGLDR 225 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV-QIQYQGKPV 313 L ++FT++CW++VTDA G+ L G Q +L L G+AP+ L +G AV ++ GK V Sbjct: 226 LSLSFTSNCWIKVTDANGRTLRQGEQSGGASLMLDGKAPFNLTLGNAGAVDELLVNGKAV 285 Query: 314 DLSRFIRTNQVARLTLN 330 L +V R+++ Sbjct: 286 TLPTDSP-GKVVRISVP 301 >UniRef50_B3R1K3 Putative transcriptional regulator yfgA; cro/C1-type DNA-binding domain n=2 Tax=Cupriavidus RepID=B3R1K3_CUPTR Length = 328 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 124/330 (37%), Gaps = 32/330 (9%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + A GA L RE +S + V+ RL + S +R IE A TF +G +R Sbjct: 25 EREAAAREIGAALAREREAQRMSVEDVSARLKVAASKLRAIEAANLQALPDVTFAKGVMR 84 Query: 67 SYARLVHIPEEELLPGLE-----KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 +YAR++H+ + LL + + A + + + + + R + G + WL L Sbjct: 85 AYARMLHVDIDPLLARFQPRPVAQVAEIARQREGGINAAFDDRNRFRSGGNGGRWIWLAL 144 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 V +G W+ D + + A ++ A + ++ + Sbjct: 145 VAVGVAAGIWFGLDHIRAWLDARSSAAETVAAEAPAADNAGT-----------------E 187 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 A + T A A +PAP+ + + + A PT Sbjct: 188 AGIVTAALPPVMAASDSPAPSAETIPASAAAAPATPA--------ATTAAAASAPAAPTA 239 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A L + F AD W E+ D +GK + G + + G PY++ IG Sbjct: 240 SAAAAPTAPAEGELQIRFAADTWFEIRDNSGKVVMGGTAKAGQTMAGGGTGPYRVVIGNV 299 Query: 302 AAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 V+ G PVDL R N VARLTL Sbjct: 300 KGVESFTRGGTPVDLKAANR-NNVARLTLP 328 >UniRef50_C6IW30 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IW30_9BACL Length = 347 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 105/306 (34%), Gaps = 13/306 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR AR GLS V E ++ + IE S ++R +I++YA V Sbjct: 3 DLGQQLREARLARGLSLDDVQEMTKIRKRYLEAIEMGDYKVLPGSFYVRAFIKTYAETVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL--FVVIGLSGAW 131 + +ELL + P A + + R+ + + ++ F V+ L + Sbjct: 63 LDADELLAEHRQNVPSTAPEPTMEPVIQKRRSRQHNERNSKWLSTTLMWSFAVLILIVIY 122 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + + AD + + QG S N + V+ N Sbjct: 123 LYFSVWGNNND---QADGNKEPDPTPVTQGTSQNGNQTGNATGGDAVGGNNGVENGTNNG 179 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 P + S N T T PDGA T + + P Sbjct: 180 TEPGINQGTDTNTGNAGNTGDESPTN----DTGNQTVTIVPDGAEG-STTKFKIQNPGTG 234 Query: 252 PNALVMNFTADCWLEVT--DATGKKLFSGMQRKDGNLNLT-GQAPYKLKIGAPAAVQIQY 308 P +V+ + W+EV ++ G+KLF ++ L G +K G + I Sbjct: 235 PVQVVITASGKSWVEVRKGNSKGEKLFYDNTKEGDVLTYDIGPEGLFVKSGNSSQTVITV 294 Query: 309 QGKPVD 314 G+ ++ Sbjct: 295 AGQTIE 300 >UniRef50_B5WST2 Transcriptional regulator, XRE family n=4 Tax=Burkholderia RepID=B5WST2_9BURK Length = 381 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 78/342 (22%), Positives = 127/342 (37%), Gaps = 25/342 (7%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 GARL RE G + + V+ RL + V + +E +TF G +RSYA+++ Sbjct: 40 AVGARLTQLRESKGWAIEDVSARLKVSVVKLSALEAGDISHLPDTTFALGVVRSYAKMLG 99 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQS-----------FSLGKRRKKRDGWL-------MT 115 L ++ + A ++ S SLG K WL + Sbjct: 100 ADPAPFTAALRREKGVPAPNLSMPASSGKDLPRGKVSLSLGDSGHKSRSWLWGVAAIIVA 159 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 L ++ G + W KA T+ +S ++ + + A Sbjct: 160 VIALSMWRTNGGDSSAWLARLKASANSSTSSDTAASGAVAQGPTTPEPSGASAPEVAATA 219 Query: 176 TTSTPPASVDTT-ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 + + + AT T P T AP P N +P+ + A Sbjct: 220 DNAANTDNAASASATPTPAPLATGTAPGSAPAANTAATPAATPAAAPKAGSQARAQADTA 279 Query: 235 AAPLPTDQAGVTTPVADPN----ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 +A P A + P P + + T D W V D GK++FSG+ +TG Sbjct: 280 SASAPVVVANASAPAVTPEPREAVVALRVTQDSWFSVRDKNGKEVFSGLVHAGDPKEVTG 339 Query: 291 QAPYKLKIGAPAAVQ-IQYQGKPVDLSRF-IRTNQVARLTLN 330 AP+K+ +G A ++ + G+PVD S++ VAR L Sbjct: 340 VAPFKVTVGNKAGLEAVTLDGQPVDPSKYSAAKGNVARFALP 381 >UniRef50_A6SZX1 Uncharacterized conserved protein n=2 Tax=Oxalobacteraceae RepID=A6SZX1_JANMA Length = 343 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 76/330 (23%), Positives = 124/330 (37%), Gaps = 11/330 (3%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 AT ++ GA+L R++ G + + VA +L L ++ +EED A +RG+ Sbjct: 21 ATEKPEPVISAGAQLATLRQERGWTVEQVANQLNLASRQIQALEEDNYAALPGMVIVRGF 80 Query: 65 IRSYARLVHIPEEELLPGLEKQ----APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 IRSY++++ + +L G++ A L + SFS K L + L Sbjct: 81 IRSYSKVLRVDPAPILAGIKDDTVAPAILPPERSPLSASFSETKLLSSNQRGLRSKAVLG 140 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +++ L + + E + E + P T P Sbjct: 141 GGILVVLGLLAYAGQHMGWLSHGPAGSPAKVEEKLAPIELSDAAPQAVVETAPPLEV--- 197 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 ++ T T T A V A P+ + AT AP A A P Sbjct: 198 ---LEVTETKTPEVKPAETAKPVAETVAAAAKPTVPAPASVATAAPAVAPLTPVAKPAAV 254 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 PV NAL +N D W+E+ A + S + + + + P + IG Sbjct: 255 AAPKPVVPVDSKNALAINVREDSWVEIKGADNSVILSRLLKAGSSEAVAVTGPVSVVIGN 314 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A V + +G PVD+ ++ VARL L Sbjct: 315 AAGVDVTLRGAPVDVVT-GNSSNVARLNLK 343 >UniRef50_C7RN39 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN39_9PROT Length = 292 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 118/308 (38%), Gaps = 53/308 (17%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 G++ A+ L L V +E + + +T +RG++R+YARL+ + +EL+ L+ Sbjct: 34 GMTVADAAQSLKLGPRQVEALEAEDWLSLPGNTMIRGFVRNYARLLSLDPDELMRELDAA 93 Query: 87 APLRAAK----VAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEE 142 R + + RR +R +L L+L V+ GL A+++ Q + Sbjct: 94 HLQRTVELDVSAGTTATLPPTVRRVERRDYLAISAGLILLVLAGL--AYYYVPADFWQSQ 151 Query: 143 ITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPA 202 + T SA + ++ + A +TAP Sbjct: 152 MATWIGSRSAPPAPVVPPVRAPADVVAPKG---------------AAGESVTVLTAPNAT 196 Query: 203 VDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTAD 262 V + V SP+ A+ A L + F Sbjct: 197 VLSEAPGVRSPAGAS-------------------------------PATAGGLKLGFAQP 225 Query: 263 CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTN 322 W EV D G+ +FSG+ ++ GQ P+ L +G V ++YQGK VDL+ I Sbjct: 226 AWAEVRDGRGQIVFSGVSPAGSRRDVAGQPPFSLVLGNATQVSVEYQGKVVDLAPHI-NG 284 Query: 323 QVARLTLN 330 VARLT+ Sbjct: 285 DVARLTVE 292 >UniRef50_Q13X27 Transcriptional regulator, XRE family n=26 Tax=Burkholderia RepID=Q13X27_BURXL Length = 370 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 81/333 (24%), Positives = 126/333 (37%), Gaps = 18/333 (5%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 GARL RE G + + V+ RL + +R +E +TF G +RSYA+++ Sbjct: 40 AVGARLTQLRESKGWTIEDVSARLKVSAIKLRALESGDISHLPDTTFALGVVRSYAKMLG 99 Query: 74 IPEEELLPGLEKQ---------APLRAAKVAPMQ--SFSLGKRRKKRDGWLMTFTWLVLF 122 L ++ P + K P S SLG +K WL + + Sbjct: 100 ADPTPFTAALRREKGVAAPDLSMPASSGKDLPRGRVSLSLGGSGQKSRSWL--WGVAAVI 157 Query: 123 VVIGLSGAWW--WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 V + G W D A + A+ ++ + S S T STP Sbjct: 158 VAVIALGMWHTNGGDSSAWLARLKASANGAAGGATGASGAVAQGQAAGSEVTAGEAASTP 217 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A V + TP A P V+ + A + AA A + Sbjct: 218 DAQVAAENPASATPMPAPLATGTTPSSAPAVTATAAAPKAGSQAQAAAAPGASAPAAVVA 277 Query: 241 DQAGVTTPVADPNALV-MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 + T A A+V + T D W V GK++FSG+ +TG AP+++ +G Sbjct: 278 GASAATVAPAAGEAIVALRVTQDSWFSVRGQDGKEVFSGLVHAGDTKEVTGVAPFRITVG 337 Query: 300 APAAVQ-IQYQGKPVDLSRFIRT-NQVARLTLN 330 A ++ + G+PVD S++ VAR L Sbjct: 338 NKAGLESLTLDGQPVDPSKYAAAKGNVARFALP 370 >UniRef50_A4JEP1 Transcriptional regulator, XRE family n=6 Tax=Burkholderia RepID=A4JEP1_BURVG Length = 337 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 118/323 (36%), Gaps = 18/323 (5%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G+RL RE G + V+ RL + +R +E TF G +RSYA+++ Sbjct: 27 AVGSRLAQLREAKGWTVDDVSARLKVAPQKLRALEAGDISHLPGVTFALGVVRSYAKMLG 86 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA--- 130 + E L ++ + ++ S R + + + +G S Sbjct: 87 VDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGR------------VSIPLGSSSGHHP 134 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W W I + + + +S + + + S A+ + A + Sbjct: 135 WLWGTAIVVVAVIAVLMWHTGGDSASWLARFKGAAAEHAPAASAVAASAASAAEEPAAGS 194 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 T A A A + + AA + AA + + VA Sbjct: 195 ASTAAGNEVVAASAVVAQASAPVAASVAAPAAAAPASQPAVVPAAASAASAAEPASVAVA 254 Query: 251 DPNALV-MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQY 308 ++V + DCW V D GK+LFS + R + G P+K+ IG A + + + Sbjct: 255 AGQSVVELKVRQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPFKVTIGNKAGLDAVAF 314 Query: 309 QGKPVDLSRF-IRTNQVARLTLN 330 GKPVD +++ VAR TL Sbjct: 315 DGKPVDPAKYSAARGNVARFTLP 337 >UniRef50_C7I047 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I047_THIIN Length = 308 Score = 149 bits (377), Expect = 9e-35, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 120/340 (35%), Gaps = 45/340 (13%) Query: 3 TEATHDQNEALT-TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 TE T + + GA LR AR G + + +A +L + + + +E A TF Sbjct: 2 TEPTPELIASRAKAGAALREARMGAGRNVEELAAQLKVAPAKIAALEAGDWSALPDDTFG 61 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKR--------DGWL 113 R +RS + + I + LL L AP+ + V + L R +R Sbjct: 62 RALLRSCCKALKIDAKPLLDLLPG-APVLHSPVPDEEGAELAARVPERPLPRAAGGARKS 120 Query: 114 MTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD 173 WL + +V + ++W P T Sbjct: 121 YGLLWLAVLIVALAAVVYFW-------------------------------PALRGLTEG 149 Query: 174 PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 ++ P + PA + P + + AN ++ P + T Sbjct: 150 LMPSAAKPQESAQGTVESVLPAASHPTSHAASHPASHPASHPANAGSSPLPLQSRPATAG 209 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT---G 290 A A T A N L + +A W++VT + GK +FS + + ++ G Sbjct: 210 SAPVPVAPVASAATSAASGNVLQLAASAPSWVQVTASNGKVIFSQLMQPGAPQSIQVPAG 269 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P + +G + Y GKPVDL+ R N VAR TL Sbjct: 270 STPLAIVVGNAPHTAVSYAGKPVDLTPDTRAN-VARFTLK 308 >UniRef50_C8QXV7 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXV7_9DELT Length = 325 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 123/343 (35%), Gaps = 31/343 (9%) Query: 1 MNTEAT------HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA 54 M++E T E L G +LR AR G+S + A + ST+R +EE+ A Sbjct: 1 MSSEQTGQHTAEEQMEEGLALGEKLRRARTAKGISLEEAAGATRIHTSTLRALEENNRAA 60 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAP---MQSFSLGKRRKKRDG 111 ASTF RG++R YA + + +E L K++ L A + G+R + Sbjct: 61 LPASTFTRGFVRIYANHLGLDQEAALRQHIKESGLPEAATTEKVNIHEILAGERMAEPLR 120 Query: 112 WL--MTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS 169 L F W++ +V L+ W + + T +S + + E S P + Sbjct: 121 ALSGSRFFWVMALLVAVLAVYWGYNSYFRPIAQPTAFPLESVFDQAQP-EATPSSPATQA 179 Query: 170 TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA 229 T + P PP A + A +TP P A Sbjct: 180 TASTPEPLPAPPEQPAVATQPPPAAPAPLTAARPPADRQ------PAPAGAESTPQPEAP 233 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWL--EVTDATGKKLFSGMQRKDGNLN 287 P A + + L F D W+ ++ ++LF + Sbjct: 234 ALSQAPVPSHPANAEAS------HVLEARFVEDTWVRLQIDQEPARQLFFQ---PGESRT 284 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +L+IG V++ Y G+P L R+ QV L+ Sbjct: 285 WKAVEQLELRIGNAGGVELSYNGEP--LPPLGRSGQVTDLSFP 325 >UniRef50_Q21W27 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21W27_RHOFD Length = 312 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 116/319 (36%), Gaps = 29/319 (9%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 ++ GA LR ARE GL A+A L + VS + +E D+ + F+R S R + Sbjct: 22 MSGGAMLRMAREAQGLHIDALAVGLKVPVSKLEALEADRFDLLPDTVFVRALAASICRTL 81 Query: 73 HIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 I +L L + APL + + + R DG +GLS W Sbjct: 82 KIDAAPVLEQLPRTAAPLLKTDESGINT----PFRPSGDG-------------LGLSS-W 123 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 R + + + +Q + + +T A + PAS DT + + Sbjct: 124 HQLSRPFVLAVLALLLGIAVLVFFPFGQQTEVASAPENASTVSAQPLSAPASPDTEDSVS 183 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + A + V +N A+ AA++P P A Sbjct: 184 VEATAPSSATNFALSGSEVAVAQNSNTAAASDALQGAASSPPVIVP---------GSGAT 234 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 L+ W+EV D+ + ++G P + +G A ++Q +GK Sbjct: 235 TGMLIFKARGSSWIEVVDSNRVVQVRKTLSDLEVVGVSGALPLSVVVGRADATEVQVRGK 294 Query: 312 PVDLSRFIRTNQVARLTLN 330 P DL+ I N VAR + Sbjct: 295 PFDLTG-IAKNNVARFEVK 312 >UniRef50_UPI0001788661 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788661 Length = 340 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 100/303 (33%), Gaps = 9/303 (2%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +LR AR Q G+S V E ++ + IE S ++R +I++YA V I Sbjct: 4 LGQQLREARLQKGMSLDDVQEMTKIRKRYLEAIEAGDYKVLPGSFYVRAFIKTYAEAVGI 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 +ELL G ++ P + R + + L+++ L + Sbjct: 64 DPDELLEGHKQDVPKSEPEATMEPVIQKRASRPTAERNMKWLPTLLMWTFPILIVVVIYL 123 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 E ++ + ++ Q P NT DP T + T T Sbjct: 124 VAINSNEPKDEPPVSNNDQTQTDQAQNPQTPDNT----DPVTPGDGAQGGENTPDGTVNE 179 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 ++D P AAT V+ Sbjct: 180 GTDGEGTDTPDGTEGTDGTDGTDIDEPGDSTPGAATVTQDRTEGKNTVFKVSGSSVKVEI 239 Query: 255 LVMNFTADCWLEVT---DATGKKLFSGMQRKDGNLNLTGQAP-YKLKIGAPAAVQIQYQG 310 + ++ W+EV +A+G+KL M +L+ + +K AA I G Sbjct: 240 VAIS-DGKSWVEVYRGNNASGEKLAFQMLENGASLSFDMDSQGLYVKSANSAATTITVGG 298 Query: 311 KPV 313 +PV Sbjct: 299 QPV 301 >UniRef50_C9S0F6 Transcriptional regulator, XRE family n=7 Tax=Geobacillus RepID=C9S0F6_GEOSY Length = 297 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 110/305 (36%), Gaps = 37/305 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RLR ARE+ +S + E ++ + IEE + ++R +IR YA V + Sbjct: 4 LGKRLREAREEKKMSLDELQEMTKIQKRYLIGIEEGNYAIMPGNFYVRAFIRQYAEAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 +EL ++ P P Q+ S K R++ + GA W Sbjct: 64 DPDELFEQYKQDIPQSYQDDIP-QTLSRVKTRQQ----------------LSAEGAKW-- 104 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + + A + + V L +P T ++P + ++ Sbjct: 105 --------LDWLPKVIVAAVVIGAAVLVWVLLQHGAANEPPTKTSPKTAEVEKPKHSPLE 156 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT--PVADP 252 PA + + A Q N PAPT GAA T++ G T VA Sbjct: 157 QAKQKQPAKETDEKATNENGQQN----EQPAPTGEEEQPGAAMNVTEKRGNTATIEVASS 212 Query: 253 NALVMNFT--ADCWLEVTDATGKKLFSGMQRKDG--NLNLTGQAPYKLKIGAPAAVQIQY 308 A + + W+EV + G + G +L+ ++ +KIG V ++ Sbjct: 213 GAFSIELSSKGTSWVEVYNTKGHTFYRGNLTSGQTKTFDLSAESEVWVKIGRTLDVDMKV 272 Query: 309 QGKPV 313 G+P Sbjct: 273 NGQPF 277 >UniRef50_B6WRD8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRD8_9DELT Length = 334 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 110/332 (33%), Gaps = 23/332 (6%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 GA L RE+ GLS VA L + ++ +E A + +G++R+YA + + Sbjct: 6 LGAALCAERERRGLSLDDVAAHLKISSRLIQALESGDLSALPHPAYTKGFLRAYASYMAL 65 Query: 75 PEEELLPGLEKQAPLRAAKVAPM------QSFSLGKRRKKR---DGWLMTFTWLVLFVVI 125 E + P A + M +S R R GWL F L+L V + Sbjct: 66 DPEAVAEVAHALQPAAATECTVMGGDEGLRSNPAILRHGARQGIAGWLRVFILLILVVAL 125 Query: 126 GLSGAWWWQD-------RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 G WQ +Q T + + + + PA Sbjct: 126 AGGGWMLWQRGVFKEFTGGKEQSLPTAEPAAVAPAPEPMAPAPSATTPAAPAASVPAGGQ 185 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 PA T V +V P+++A PA AA + Sbjct: 186 AAPAPQGNGGTAAPAGGVAPVPGSVQPERSAA---PAYTGMMDTRPAELTWGQTANAATV 242 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 A + A + +V+ +CW+ T + FS K + L ++K+ Sbjct: 243 QDTAAQDPSLPAGMHRVVVTGIGECWMRATVDGEVRQFS--VHKGDIITLEFAKALEVKL 300 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 G VQ+ Y G +L + QV L Sbjct: 301 GNAGGVQVSYDGT--ELPAPGQAGQVKTLVFP 330 >UniRef50_C6BV70 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BV70_DESAD Length = 292 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 123/324 (37%), Gaps = 34/324 (10%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + G+RL++ R++ GL+ + + E + + IE + +G+I++YA+ Sbjct: 2 DLKELGSRLKDERKRQGLTMEQIMEITKVSRVNITAIESGNQKEFPHEVYAKGFIKTYAK 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + EE+ + + A ++ T +++ ++ G+ G Sbjct: 62 ALGLDAEEIGDEFSRIMGSGTTESADDVVETVQPDYSADTKKSPVGTIILILLLAGVVGG 121 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + ++ S+ +E + + PAT V+ A + Sbjct: 122 LVYYLHD-------------NSFFSAKNEAQTEIVAEEAVQEKPATEP----QVEAPAVD 164 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + V PAPA Q A +P + ++ A P AA ++ V PV Sbjct: 165 EKKAEVVEPAPAEVEQSAATEAPVETKIEEQAVEQPVAA-----------EENIVAEPVG 213 Query: 251 DPNALVMNFTADCWLE-VTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 + A+ CWLE V D + K + ++ L+L + KLK+G V+I Sbjct: 214 NTVAITAKPGEACWLEAVVDGSAK---EYVLQEGETLSLPFEDSLKLKLGNGGGVEIASN 270 Query: 310 GKPVDLSRFIRTNQVARLTLNAEQ 333 GKP QV +L +A Q Sbjct: 271 GKPYSFDA--PKGQVKKLEFSAVQ 292 >UniRef50_C3X7I5 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X7I5_OXAFO Length = 329 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 113/335 (33%), Gaps = 38/335 (11%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N AT + EA GA L R G+S++ +A RL + V VR +E D A Sbjct: 27 NVAATTETTEAQKPGAILAARRVAAGISEEQIASRLKMSVRQVRSLEADDYEALHGMATA 86 Query: 62 RGYIRSYARLVHIPEEELLPGL----EKQAPLRAAKVAPMQSF--SLGKRRKKRDGWLMT 115 RG++R+YAR++ I E L+ + A + P++ F + RKKR Sbjct: 87 RGFVRAYARILQIDPEPLVASFAEKKKASASASVQQGKPVEPFVKNREPFRKKRGNSGKI 146 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 + + S + + + PA Sbjct: 147 A-------------------ILLIIVVGVLVVASNMNFFSFMDKFKKESAEKATPAVAPA 187 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 P T A PA N +QAN +A Sbjct: 188 PPVVPATETKETVPPAADQATPENKPADQAAANTAGQTNQANAPVQTPATQSAPV----- 242 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 A P + LV+NF WL++ G + + + L P Sbjct: 243 -------AATQAPAEKGSLLVINFREKSWLQIQKKDGAVIAEYIGKPGEKRQLEVTEPVT 295 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +G V ++++G PVDL TN VA++TL Sbjct: 296 VIVGFAPGVNMEFKGAPVDLVSNT-TNSVAKVTLK 329 >UniRef50_D1RE75 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RE75_LEGLO Length = 194 Score = 143 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 4/189 (2%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT T D+N GA L + REQ G + + VA +L L+ + IE ++ Sbjct: 1 MNTITTLDENILENDRNPGAHLASIREQKGYTIEYVANKLHLRARIIELIENNEFHLLPE 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 F++GY+R+YA+L+ E L KQ + + S + K + + FT Sbjct: 61 PVFVKGYLRAYAKLLGTSPEPYLAIFNKQYLVERKPERALWQQSKRESHKA-EHIIRWFT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L VI G WW ++R QQ T L+ + +++ + + + + Sbjct: 120 LLFALGVIVAVGIWWQKNRDNQQLFSTNSPAPVDLSLNHQTPVNKNLEIKLTDISKMQSL 179 Query: 178 STPPASVDT 186 P + Sbjct: 180 LNPKPEMSP 188 >UniRef50_C0DW30 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DW30_EIKCO Length = 296 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 109/337 (32%), Gaps = 42/337 (12%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + A G LR REQ LS V+E L L V +E F Sbjct: 1 MTEISPPQLAAAEELGKLLRQNREQQQLSLGDVSEHLKLPARQVEALENADFSKLPEPVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +RG++RSY R +++ E +L +Q + +P+ + + + Sbjct: 61 VRGFLRSYGRYLNLDE-AVLNSYLEQIVAPSQFQSPLAKEDGNVKMTYHNAPIKK----- 114 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 W + A + Q + + Q T+ P P Sbjct: 115 ------PFPRWIFGVAAAAAIVGVVVLWQMKSNTEHQKQNAQ--------TSIPENQILP 160 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P + ++N Q + + S Q + A+TPA + G Sbjct: 161 P---NLDSSNVQVLPLQEASAPAASLPAVSGSQPQPVENPASTPAAAGIQSAQG------ 211 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 LV+ +L VTD G+ L S + +G PY+++IG Sbjct: 212 -------------ELVLKLRFRSFLTVTDKDGQMLVSKIVPAGSEHRFSGNGPYRVRIGF 258 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 Y G+ ++++ + + A T AQ Sbjct: 259 AKNSLASYSGRGINVAEHMVDQKTAAFTAGGSDDAAQ 295 >UniRef50_B9TIK3 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TIK3_RICCO Length = 355 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 71/335 (21%), Positives = 121/335 (36%), Gaps = 20/335 (5%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 GA L R++ G S + VA + L ++ IE D A RG++RSYA++V + Sbjct: 22 PGAMLAAQRQKKGWSVEQVASLVKLAPRQIQAIEADNYAALPGLAVARGFVRSYAKVVGL 81 Query: 75 PEEELLPGLEKQAPL-RAAKVAPMQSFSLGKRR----------KKRDGWLMTFTWLVLFV 123 L + +++ + + + P S S + L +V+ Sbjct: 82 DANALTAAMPQESDVAQRDHIVPQHSLSTPFSEGPLPAMMMSTRGNSSPLPIIAGVVVVA 141 Query: 124 VIGLSGAWWWQDRKAQQEEITTM-----ADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 ++ A W D A ++ + ++ EL +N++ G S + S Sbjct: 142 LLAGGAAVRWSDLGANVPQLAWLKSHKSESAAAPELPANADAGSSETPVNARVETITPAS 201 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 A A PA A A + + A A+ + A + AP Sbjct: 202 DEAAKSAAAAVEAAPAQAATPAAAETASAPAHAADAPAASVPASAASAANAASASAPAPA 261 Query: 239 PTDQAGVTTP---VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 V + V + L + F D W+E+ A + S + + Sbjct: 262 QASGTTVPSGLNIVNSKDMLRLTFREDSWVEIRRADKSTIISRLLKAGTTEAFDVSDATS 321 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 L IG A V +G+P+DL +N VAR+ LN Sbjct: 322 LTIGNAAGVDATLRGQPLDLKTPGGSN-VARINLN 355 >UniRef50_B9ZLM4 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLM4_9GAMM Length = 404 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 108/335 (32%), Gaps = 24/335 (7%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE GL +A R+ L T+ D+E ++ A ++RGY+R+ AR + + + Sbjct: 70 LRRAREAAGLDTATLAHRIHLGRGTLEDLEANRFDHM-APAYVRGYLRACARELGVNADP 128 Query: 79 LLPGLEKQAPLRAA-------------KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 L E + + L L + W Sbjct: 129 WLRAFEGHGLTEPELRAVATASARSKRRRRSSAPYWLAFLLVLALLGLGVYAWTERGGGT 188 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + W + + ELS+ + T + Sbjct: 189 PSFPSLGWLEDDRSAPSEGAVDRAPHDELSAPPALVEEAEPEPEAPVAAETDGEASETEA 248 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT----PAPTAATTPDGAAPLPTD 241 + +T P P D + A+ DT + P A GA +P Sbjct: 249 ERDSEPAMDTLTEPMPTEDTAADDTAPEDTASEDTVESSGSGPVSEMALLTGGARAVPDP 308 Query: 242 QAGVTTPVADPN------ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + P LV++ T W+E+ +A + + +G+ L P + Sbjct: 309 EEDGAEPNGGEAGRDGVYRLVLDVTETSWVEIRNADDEVVLTGVLSSGDREELELTLPGR 368 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +G V++ G+ D +R+++ AR L Sbjct: 369 VVLGNARGVELTLDGESFDFETHVRSDRTARFDLE 403 >UniRef50_B9Z686 Transcriptional regulator, XRE family n=2 Tax=Chromobacterium group RepID=B9Z686_9NEIS Length = 295 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 84/338 (24%), Positives = 136/338 (40%), Gaps = 55/338 (16%) Query: 4 EATHDQNEAL-----TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 E+ +QN L + GA L+ ARE GLS VA+RL L + + IE D+ A + Sbjct: 2 ESQTEQNSTLPPDRDSVGAALKAAREAAGLSLGEVADRLKLSLKQLEAIEADRFEALPGA 61 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVA----PMQSFSLGKRRKKRDGWLM 114 F+RG++R+YAR + + L+ LE++ P +VA +++ S+ ++ G L Sbjct: 62 AFVRGFVRNYARFLGLDAVPLMARLEERFPSSVKEVANLSKEVEAASVVSEPEETSGLLG 121 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 L++ VV+ +GA+W+ ++P Sbjct: 122 KRAILLVLVVVLAAGAFWF----------------------------------ARPGSEP 147 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV--DTAATPAPTAATTP 232 A P +T + A P + V + A V A AA Sbjct: 148 AKDEAKQD---------LAPMLTEQSTASAPVEAEPVKGASAAVTAPEPAPVPAPAAKPA 198 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 A P P A + + D W+ V D +GKKL + + GQ+ Sbjct: 199 PAVAAAPASAPVSAPPTAGGGTVKLIAKQDAWVSVIDGSGKKLVFETLKAGAAKEVVGQS 258 Query: 293 PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P+KL +G V++ + G+PV ++ IR ARL L Sbjct: 259 PFKLTVGNATQVEVSFNGQPVVMTGKIR-GTTARLELK 295 >UniRef50_A7HTY1 Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HTY1_PARL1 Length = 374 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 18/316 (5%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 EA + GA LR AR + G +++A+ L ++ + +EE + A + G++RSYA Sbjct: 32 EAESVGADLRAARLRRGDDIRSIAQALRIRRDQIEALEEGRHDELPARAYAVGFVRSYAE 91 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + ++ + + RAA A + + R+ G T L++ +V+ Sbjct: 92 YLGLDSRHIVQRYKDELDGRAAAAAELHFPDAAEARRLPKG-----TALIVALVVASGIY 146 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA-SVDTTAT 189 W K+ E +TT ++ ++ E+ +S T D A+ +TP A +V Sbjct: 147 GGWLLTKSTDEMMTTRTAATAPAVAPIVEEVKS----PGTRGDSASAATPRADAVPVVRV 202 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPT------AATTPDGAAPLPTDQA 243 P TA PQ +P+ A VD P AA A LP Sbjct: 203 PGLAPVATAEQNMSTPQSLYDPAPAPATVDAEGLPLEDSGEVEMAALEESAAVELPPLPE 262 Query: 244 GVT--TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 G D +V WL + D TG+ L + + + L Sbjct: 263 GTPYGAENVDGRVVVRARRDGAWLRIEDGTGQVLIEQTFKAGDSYRAPSRPGVILVARDA 322 Query: 302 AAVQIQYQGKPVDLSR 317 +A +I G+ + L+ Sbjct: 323 SAFEIMVDGQSLGLAG 338 >UniRef50_C8X3H6 XRE family transcriptional regulator n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3H6_DESRD Length = 342 Score = 140 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 110/343 (32%), Gaps = 33/343 (9%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 GA LR RE+ L+ V ER + S ++ IE+ + + RG+I++YA L+ + Sbjct: 6 IGALLRQERERQNLALSDVVERTKISRSCIQAIEKGDSEGLPHPVYARGFIKNYATLLGL 65 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQ---------SFSLGKRRKKRDGWLMTFTWLVLFVVI 125 +L ++Q L V S R L++ ++ +L Sbjct: 66 DGAKLAESFDRQYGLEEEGVVLESGDAAAEEVISKPEASRHSALAVGLISLSFFILLGGG 125 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVP--------LNTSTTTDPATT 177 L ++ E Q +E + S P ++S++ A Sbjct: 126 WLIYDIYFSSPTVPISEPQPPLGQDESEGLEMESESASAPKPSVPGDGGDSSSSETGAAM 185 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ--------ANVDTAATPAPTAA 229 + P ATN V + + Q NA + + T Sbjct: 186 DSEPVRAPGNATNASLQPVNSTTSPTNGQTNATPAVATNASSASSSQAQATPTPEVEEPE 245 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWL--EVTDATGKKLFSGMQRKDGNLN 287 T A + + L + + CW EV +T R + Sbjct: 246 ATSVDTAEQSGQNTAAPSAEVEDKVLQIAASEACWFRAEVDGSTRDVYL----RPGETIA 301 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 L +L++G V + Y G+ V + + +V L Sbjct: 302 LHFDESLELRLGNAGGVSLMYNGESV--AVDASSGEVKTLRFP 342 >UniRef50_Q5ZV95 DNA-binding protein, putative n=4 Tax=Legionella pneumophila RepID=Q5ZV95_LEGPH Length = 189 Score = 140 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 8/190 (4%) Query: 1 MNTEATHDQ---NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT A D+ NE G L R+Q G S + VA +L L+ + IE Sbjct: 1 MNTIAAMDETRNNEFTNPGYELAALRQQKGYSIEYVASKLHLRARIIELIEAGDFDLLPQ 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQA--PLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 F++GY+R+Y++L+ + E L Q + + A QS K K + ++ Sbjct: 61 PVFVKGYLRAYSKLLGVSPEPFLTLFNAQYCFEKKPERAALWQS---KKESHKAEHFIKW 117 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 FT L V+ G WW +++ +Q + + ++SE + + P Sbjct: 118 FTILFAIGVLVAVGIWWQKNKDSQSIDTPKENSSGLSISETSSEIKLTDLSKMESLLTPN 177 Query: 176 TTSTPPASVD 185 T P + Sbjct: 178 NTQMTPLEKN 187 >UniRef50_B4SSW5 Transcriptional regulator, XRE family n=20 Tax=Xanthomonadaceae RepID=B4SSW5_STRM5 Length = 289 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 118/335 (35%), Gaps = 52/335 (15%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 ++ + A G RLR ARE GL+ + V RL + + VR +EE++ A F Sbjct: 2 IDDQTVSALETAAGCGTRLRQAREAAGLTLEDVGSRLRMPIQVVRSLEEEQWQKLGAPVF 61 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +RG +RSYARL+ + +LL + P+ + +R + G L Sbjct: 62 VRGQLRSYARLLDVDVGQLLEQ-AQVGPVVPPTLVSHTHTPRARRIAENLGRR----VLY 116 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + + L+ W+ R SA + N+ ++P T A Sbjct: 117 VGITAVLAVPVWFATRGHFD---------GSAPPAPNTASLDALPAAVPVTPSAAGI--- 164 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + + AP + Sbjct: 165 ----------------------------------EPSAPVEVAAAPASKPAATPYVASLA 190 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 A N L M F D W+++ G + + + + + T ++ +G Sbjct: 191 PVPRSAPAAAAANTLDMQFNGDSWVDIGGPDGTSVEKALIKSGESRSFTPGQVARVTLGN 250 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSP 335 +AVQ+Q G VDL+ + R N VAR +++E S Sbjct: 251 ASAVQVQQNGAIVDLTPYQRAN-VARFQVSSEGSV 284 >UniRef50_C6N7L3 DNA-binding protein, putative n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7L3_9GAMM Length = 192 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 4/186 (2%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M+T T D N A+ GA+L + REQ G S + +A +L L+ + IE+++ + Sbjct: 1 MSTTTTLDDNTIVHAINPGAQLASIREQKGYSVEFIANKLHLRTRVIELIEKNEFQSLPG 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 + F++GY+R+YA+++ + E L ++Q + S + K + + FT Sbjct: 61 TVFIKGYLRAYAKILDVSPEPYLAVFDEQYVTEKKPERALWQQSKRESNKA-EYVIRWFT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L V+ G WW +++ +QQ+ + + + ++ NS V L + Sbjct: 120 ILFALGVVVAVGIWWQKNQDSQQQLFSEKSAPTDLSMNQNSITTTEVKLTDISKMQSLLN 179 Query: 178 STPPAS 183 P S Sbjct: 180 PKPEMS 185 >UniRef50_D1U5G8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5G8_9DELT Length = 364 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 104/356 (29%), Gaps = 43/356 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR RE+ GL+ AV E + +++ +E + +G+++SYAR + + Sbjct: 6 LGQALREERERKGLTVTAVMEATKISRTSIEALEAGNRSNLPHPVYAKGFVKSYARFLGL 65 Query: 75 PEEELLPGLEKQ------------APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 +EL +++ + +R ++ + L Sbjct: 66 DADELSMVADREYKDESCGPREHGYDVAPHAEKAFHVNDCANAENRRSRLVLVVALIFLV 125 Query: 123 VVIGLSGAWWWQDRKAQQEE-----------ITTMADQSSAELSSNSEQGQSVPLNTSTT 171 V+GL + D K+ + ++ ++ Q+ P T+ Sbjct: 126 AVVGLLVFSFSSDDKSASLDQGETVRSGMGGTQAGPPAVDPDMVTDKAGSQAAPGETTAD 185 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 + + D T + P Q +V A P A T Sbjct: 186 SPGVQEQSSGTDQDGTGQSGAGQGEAGALPTAGEPPQPGKPVDQGSVGQGAADPPAAKTG 245 Query: 232 PDGAAPLPTDQAGVTTPVADPNA-------------------LVMNFTADCWLEVTDATG 272 G P A + + CW+ + Sbjct: 246 AVGTKPATDGSARTVAKANGQDETFAVTDSEAGKQKFDHVLIIRATTAKGCWIGLWQGDE 305 Query: 273 KKLFSG-MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARL 327 + + R+ L L P +++IG A V + Y KP L Q R Sbjct: 306 TAMARDFVLRQGEPLRLMFNNPRRIRIGNVAGVSVTYNDKPYPLDNARGNIQTLRF 361 >UniRef50_B8IZ93 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZ93_DESDA Length = 314 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 121/317 (38%), Gaps = 13/317 (4%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 GA LR REQ GLS + A L + +R +E + + +G+IRSY+ V + Sbjct: 6 LGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYSAYVGL 65 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 EE+ L ++ A Q + L F ++ +++GL WQ Sbjct: 66 SAEEVGAAL--ATLEANSEEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYVAWQ 123 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + T A + PL+T+ A + PA A Sbjct: 124 QGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARPGPEAARTDSPAGQSGGADLPAAA 183 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A Q++ VV+ SQA A + P AA + VA P+ Sbjct: 184 TAAQAAAPAGAQRSEVVTGSQAAPAAATA------SAPASAAAPAAAANPESIAVAGPHK 237 Query: 255 LVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 +++ T +CW+ + D T + FS RK LT +LK+G V+I+Y G+ Sbjct: 238 VIITATEECWVHSSADNTDTRQFS--LRKGDTFALTFNKSLELKLGNAGGVRIRYNGE-- 293 Query: 314 DLSRFIRTNQVARLTLN 330 +L + QV LT Sbjct: 294 ELPPVGGSGQVRTLTFP 310 >UniRef50_D2L1A7 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1A7_9DELT Length = 454 Score = 138 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 114/341 (33%), Gaps = 18/341 (5%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + G LR RE+ GL+ + V++++ + S + IEE + +G+I++YAR Sbjct: 2 DLRELGTILREERERQGLTIEDVSDKIKITRSCLTAIEEGNQSVLPHPVYAKGFIKNYAR 61 Query: 71 LVHIPEEELLPGLEKQAPLRAA--------KVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 L+ + +EE L + K P + + + LV F Sbjct: 62 LLGVDQEEFNRRLSQVYQPEEPVVGNVSLIKDIPEDDCGCAVKPASKVPLVPALLCLVAF 121 Query: 123 VVIGLSGAWWWQD------RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 + + G + + + + A ++ L+S SE + VP+ Sbjct: 122 LAVAGLGWYLFAHVLAKSGDETESAAPQATAKPAAPPLASESEPARPVPVVPRPAEQAPP 181 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 TP + +T A +P + A + PA A A Sbjct: 182 PQTPAPAAETPAPVAPPAPKAEATTLPEPSAEDRATQDIA-TSGPSAPAAPAIPVAPEPA 240 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 T P+ + + CWL+ A G + M K + Sbjct: 241 APAPSAKAFTVGEHGPHTVTIVANDRCWLQA-GADGGTMHETMLEKGDTFTGRFADYLLV 299 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 ++G V+I++ K V L A+++P + Sbjct: 300 RLGNAPGVEIRFDNKLYPFQA--GKGSVKTLKFVAKKTPDE 338 Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 9/122 (7%) Query: 212 SPSQANVDTAATPAPTAATTPDGAAPLPTDQA----GVTTPVADPNALVMNFTADCWLEV 267 +P +A PAP+ A P A G P A + + W+ V Sbjct: 335 TPDEAAQAVPGAPAPSQAPAVPTTPVAPAATAPALGGEAVPGAGAKEVEIYGQDGSWVIV 394 Query: 268 TDATG--KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVA 325 G K+++ +K L + ++K+G P++V +Y GK + + Sbjct: 395 NPDKGPSKEIY---VKKGQRLTVPFSEKIEIKLGNPSSVIFRYDGKETPVVTEKGAVKTI 451 Query: 326 RL 327 R Sbjct: 452 RF 453 >UniRef50_B0THU0 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THU0_HELMI Length = 300 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 107/314 (34%), Gaps = 28/314 (8%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LR AREQ LS + V ++++ + +EE + G++RSYA+ + Sbjct: 3 SLGLVLRQAREQKQLSLRQVEAETNIRLAYLTALEEGNYDLLPGRVYGVGFMRSYAKYLG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + L+ ++ + + R G ++ + V ++G + Sbjct: 63 LDPAPLIEAMKHDWKTEEEESPLVTEEREKAYSAPRTGGIVKYA-GYGLAVAAIAGLVFV 121 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 R ++++ ++S G + T P + A+N Sbjct: 122 SARLPDKDQLEPNRPDGRVAINSTKPSGPAAADGTGALGSSGVLGASPGA---QASNGAG 178 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + AP + P + AV P+ PA P Sbjct: 179 ADPVSLAPGLSPVEPAVAQPAANGEKAPGVPAVA--------------------PAPSGV 218 Query: 254 ALVMNFTAD-CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 A+ + D CW+ V+ G+ + GM + TG+ + +G AV++ GK Sbjct: 219 AVTLRVVQDRCWMSVS-QDGQPAYEGMVNVGDAMTFTGKDKVNVVLGNAGAVEVILNGK- 276 Query: 313 VDLSRFIRTNQVAR 326 L QV + Sbjct: 277 -SLGTLGDVGQVIK 289 >UniRef50_C0GM52 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GM52_9DELT Length = 297 Score = 136 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 107/322 (33%), Gaps = 31/322 (9%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 E G +L R + GLS + V + + ++ ++ +E+ + +G++++YAR Sbjct: 2 EMQELGRKLYEERTRRGLSLEQVQDETKISLNFLKALEDGDVEQLPHPVYAKGFMQNYAR 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + + + K + + ++ K +K+ + T V+ + + + Sbjct: 62 FLGLDWQSMGEEFSKIYHAEEETESLEELPTVLKEQKEARLFSYTVKASVIILALVIIVG 121 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + W + QEE AE + Q PL D A T P Sbjct: 122 FGWFLYSSFQEEPAQEEQAELAEEIPEYDHVQEEPLEDDILEDRAVTPEEP--------- 172 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + P P V +++ T D A + Sbjct: 173 -EIPGDAVPQEDVLLRED-------------VDELQPRVTQLDLEAFAVEPDEPEEEEIP 218 Query: 251 DPNALVMNFTADCWL--EVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 D + + +CWL E D + R ++ + L++G V I Sbjct: 219 DTVLVHIEAHEECWLMYETDDESRDHFL----RPGDSIEVEYTGSMSLRLGNAGGVSISL 274 Query: 309 QGKPVDLSRFIRTNQVARLTLN 330 G+P DL + +V L N Sbjct: 275 NGEPYDLDA--ASGEVKTLEFN 294 >UniRef50_C5CXG5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXG5_VARPS Length = 322 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 111/322 (34%), Gaps = 30/322 (9%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G LR ARE GL + VA L + + +E D + F R S R + Sbjct: 25 TAGDMLREAREAHGLHIEMVAAALKVPPQKLIALEADDIASLPDPVFARALASSVCRALR 84 Query: 74 IPEEELLPGLE--KQAPLRAAKVAPMQSFSLGKRRK---KRDGWLMTFTWLVLFVVIGLS 128 I +L L ++A L A + G R + G V+ +++ + Sbjct: 85 IDPAPVLAKLPGAQRAALALADRTLKSNIVSGTPRWNGGRSSGLPSRALLTVVGLLLVGA 144 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 +W QS + S + + T PA ++ Sbjct: 145 AVLFW-------------LPQSVFDQVGASVSRWTSRGDGDTAPVAEAPVAAPAPGGSSV 191 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 P P P+ A +A A A+ + AAP + Q Sbjct: 192 VVESAPVSPVAPPTSAAPAALGTPPAAAPPAGSAPAAAAASPSAVAAAPAGSQQ------ 245 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 LV +CW+ VT+A GK+L + + L+G P + +G +AV +Q Sbjct: 246 ------LVFVAREECWITVTEAGGKQLLRRSLQAGETVALSGTLPLSVVVGRASAVDVQV 299 Query: 309 QGKPVDLSRFIRTNQVARLTLN 330 GKP DL R VAR + Sbjct: 300 HGKPYDLKPVTRGGGVARFEVK 321 >UniRef50_B1XXL4 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXL4_LEPCP Length = 299 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 111/318 (34%), Gaps = 37/318 (11%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + GA LR ARE GL A L + V ++ +E D+ F+RG + AR + Sbjct: 19 TSAGALLRAAREARGLELDQFALLLKVPVPKLQALEADRLDQLPGLAFVRGLATAIARQL 78 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 I + +L A +A + + L ++ ++ +W Sbjct: 79 EIDPQPILAA--LPAAAQAPQALENVTRGLATPYREPGSRMLPGSW-------------- 122 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 E A L + P + +P + A+ Sbjct: 123 --------PEWLRPGVIVPALLLLLALLFWLAPPMRALMREPVAAAASAVQATVAASQAV 174 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 T V + + T +A+ + P ++ + A Sbjct: 175 TNEV------------RSADGADNGGAVSTTLESSASAVVETVHSAPPEEPASSQNAAAA 222 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 ++V+ +AD W+E D G L S M + L G P +LKIG ++ ++G+P Sbjct: 223 GSVVLRTSADSWIEARDGAGALLMSRMLPAGEVVGLDGSLPIRLKIGNADGTRLHFRGQP 282 Query: 313 VDLSRFIRTNQVARLTLN 330 +DL+ R N VARL L Sbjct: 283 IDLNPHTRDN-VARLELK 299 >UniRef50_Q3YJ01 Putative uncharacterized protein (Fragment) n=1 Tax=Haemophilus parasuis RepID=Q3YJ01_HAEPR Length = 201 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 4/196 (2%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRGY 64 T + L+ G +L+NARE L L+ + VA + LK S + IE D + F+RGY Sbjct: 2 TMTETMTLSLGQQLKNAREALNLTIEDVARKTNLKKSHLEAIENDIFILPSVPPAFVRGY 61 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +R+Y R + +PE + + K + K K + W+ TW+VL Sbjct: 62 VRNYVRFLRLPETLVNSV--NYGEVTIPKEVRKAAPIAVKNHKSQMRWVKGLTWIVLLSA 119 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT-TDPATTSTPPAS 183 +G++ AWWWQ+ + Q + ++ + E+ Q P+ T + T PA Sbjct: 120 VGMTLAWWWQEHQKDQANREQLIVNTTEATAKVVEEPQVTPVEPQPTPAEVPQAVTLPAK 179 Query: 184 VDTTATNTQTPAVTAP 199 AT P Sbjct: 180 NAEPATPAVESNHQEP 195 >UniRef50_UPI0001C42506 hypothetical protein BpOF4_19605 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42506 Length = 300 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 39/311 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR ARE+ GLS + + ++ + IEE + + R ++++YA V + Sbjct: 4 LGQHLREAREEKGLSLEDLQRSTKIQKRYLLAIEEGRFDTLPGLFYARAFVKTYAEAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFS-------LGKRRKKRDGWLMTFTWLVLFVVIGL 127 E L + P + + S S ++ + + + F+V+ Sbjct: 64 DPEPLFDQYRNELPNPQKESIDLPSRSERSKSPVRQPKKSSKAPAFLPAVIALAFLVVIA 123 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 G W ++ + A ++ + E+ + T + A D Sbjct: 124 LGIWL---------VTQSIGGERDAAIAPDPEENVDADFSEGATE---PEADEEAEGDQE 171 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 A N + ++ S N+ + + Sbjct: 172 AANEDAVEEEPAVEEEEEEEETSSETSTLNLLNS------------------SGNTSYFE 213 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN--LTGQAPYKLKIGAPAAVQ 305 AD +V+ F+ +++V + G FSG L G+ + GA V Sbjct: 214 LEADRFDVVIQFSDSSYVDVKNGLGNMFFSGQPASGEELEYDFQGEEEVEFNFGASQNVT 273 Query: 306 IQYQGKPVDLS 316 + + VD Sbjct: 274 LIVNDEEVDFP 284 >UniRef50_Q1MRL8 Uncharacterized protein conserved in bacteria n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRL8_LAWIP Length = 339 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 127/341 (37%), Gaps = 25/341 (7%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N++ H + G+ L R + G + ++ L + + T++ IEE + + Sbjct: 7 NSQEVH--SALKEIGSLLYQERVKKGYRLEDISIYLKISIHTLQAIEEGTIDSLPHLVYT 64 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 +G+IRSYA+ + IPE EL + K+ W T+L + Sbjct: 65 KGFIRSYAQFLDIPEYELTSIFYRIEHTEKTNDEGEDYPFKKKKFFSPYVWGSILTFLCI 124 Query: 122 FVVIGLSGAWWWQDRK---AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 L+G+W + + + I M D E+ N ++ ++ + + P S Sbjct: 125 -----LAGSWLFYSSDITFSSFDVIAQMTDSGKKEVLPNQKKEENQS--EGSLSLPQQQS 177 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATP----APTAATTPDG 234 +++ T+ P + + ++ +A + + T Sbjct: 178 QENIKSNSSVVVTKIPENFQDHIVIKKELELSSKEDSSSQLSAQLDEKSFSQSTDMTNKS 237 Query: 235 AAPLPTDQAGVTT----PVADPNALVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLT 289 +D++ V N +V+ DCW+ T D T + F ++ + L+ Sbjct: 238 DKSDVSDKSVVEPVHMNKPGKKNIVVLKGLEDCWVHSTADKTETRQFY--VQQGQLVALS 295 Query: 290 GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 LK+G ++++Y G+ L R+ QV +TL Sbjct: 296 FSKSLVLKLGNAGGIELKYNGEK--LPPVGRSGQVKTITLP 334 >UniRef50_A2SHB6 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SHB6_METPP Length = 304 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 112/330 (33%), Gaps = 26/330 (7%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ A T G LR ARE G+ +A L + + IE D +TF Sbjct: 1 MSEGTVDAGPPATTAGKLLRAARESQGMHLAVLAASLKVSPQKLEAIENDHPEQLPDATF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 R +S R + I E +L L P A+ + + G + D + + Sbjct: 61 ARALAQSMCRALKIDAEPVLSLL----PTAASAGRGLDHVARGLNQPFHDRGVPS----- 111 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + Q+ + + L++ + V + S Sbjct: 112 -------------DGDEWQRFLSPPLIAAAVLVLAAVAVYLLPVGWVGRLLPTDPSASAV 158 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P + +T + + A + A+ S A AP +A + Sbjct: 159 PEIAASNPIDTGVAVSSTTSIAPESASPALAGASAVGSSEAEAAAPGSAVIDTVFSAPVG 218 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 A + M A+ W+EV DA G+ L S L G P ++ +G Sbjct: 219 TAASASAAGGLL---TMRAVAESWVEVRDAKGQVLLSRTLAAGEAAGLDGPLPLRVTVGN 275 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A QI ++G+PV LS R N VARL L Sbjct: 276 AEATQIVFRGQPVALSESTRDN-VARLELK 304 >UniRef50_Q21KT4 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KT4_SACD2 Length = 331 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 121/338 (35%), Gaps = 27/338 (7%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + GA+L+ R + L+ + + + VS V+ +EE++ TF Sbjct: 10 MSESQELTASPNDGVGAKLKAIRLEKKLNIEDFTKLSAITVSKVQALEEEQYRKVGTETF 69 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAK---VAPMQSFSLGKRRKKRDGWLMTFT 117 + GYIR YA + + + L+ + Q A V Q + K + L Sbjct: 70 VIGYIRKYATWLGVDADALVNEYKSQIGESALPNVLVTTEQPLPDTAPKPKSEKVLKPVP 129 Query: 118 WLV------LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 V L + AWW I T+ S + ++ + T Sbjct: 130 AHVDVPQGQLINKLKAIPAWWILALLVGLWLIGTLVFVPSVDREQEEQELPAQVEAKRET 189 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 P P + ++ ++ AA Sbjct: 190 PAPEVIEEPAQVETEQQVDIVEQSI-----------------EDTSIIEAAEVQTQQVQA 232 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 P+ + + A A + LV+ FT DCW+E+ +A+GK +F+ +Q L L Q Sbjct: 233 PEAVERVNSAPANAVGQPAALDELVLTFTDDCWVEIKNASGKIIFAAVQTPADTLTLADQ 292 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 AP+++ +G AV ++ + +++ + R T+ Sbjct: 293 APFEIMLGNARAVAVKMNDREIEVQP-RPGRKTLRFTV 329 >UniRef50_A9KFU7 Integral membrane protein n=6 Tax=Coxiella burnetii RepID=A9KFU7_COXBN Length = 263 Score = 134 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 11/191 (5%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + A T G LR AR+ L Q VA+ + L + V+D+E+D A + Sbjct: 61 MEINLPRSDSAAKTPGILLREARQAKNLQQSDVAKEIRLSIQWVKDLEQDDYSHVPALIY 120 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAP------LRAAKVAPMQSFSLG---KRRKKRDG 111 +RGY+R YAR V I +E++ ++ ++A P++ ++ + ++ +G Sbjct: 121 VRGYLRGYARYVGISPDEVMAAFDEMGLEEEFERVKAEVERPVKHHAVPVVLRSKRMING 180 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 ++ + ++L V + +S WWQ +K ++ ++ L SV NT+ T Sbjct: 181 KMVRWVTVILLVALIVSVGVWWQGKKHILGQLQSVISSPQENLPLKQTSVNSV--NTNKT 238 Query: 172 TDPATTSTPPA 182 + T P A Sbjct: 239 INTNLTEQPTA 249 >UniRef50_A6CQ51 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQ51_9BACI Length = 304 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 35/306 (11%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 GARL+ ARE G S + ++ + IEE ++R +I+ YA V + Sbjct: 7 LGARLKEAREAKGYSLDDLQNMTKIQKRYLMGIEEGNYDMMPGKFYVRAFIKQYAEAVGL 66 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQS-FSLGKRRKKRDGWLMTFT--WLVLFVVIGLSGAW 131 E + P+ P S K + +M LV VIG Sbjct: 67 NPEMIFEEYSNDIPVTNTGDLPELSRVQSRKPVSQSSSKVMNVIPRILVALFVIGAIFVV 126 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 W+ + D + + +S + + + A D+ + T Sbjct: 127 WYLLPNQIGNDNAGTDD----TQEESVDYSESDEVQQPDDESGDSEESTDADSDSEGSET 182 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + P +P Q V A + + D Sbjct: 183 GQSEEESEEPVEEPSQEITV------------------------ANVSGKETTYELKNTD 218 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL---TGQAPYKLKIGAPAAVQIQY 308 L ++ T D W+ V ++ ++LF+ M ++ + + +G +A I+ Sbjct: 219 DFNLEISATGDTWIGVYNSKDEQLFNQMMKEGDTQTFELSQDGEAF-IVVGNASATNIKV 277 Query: 309 QGKPVD 314 + ++ Sbjct: 278 NEEQIN 283 >UniRef50_C6NWC2 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWC2_9GAMM Length = 357 Score = 133 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 125/324 (38%), Gaps = 52/324 (16%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 D+ EA LR REQ G + Q VAERL ++ + V +E+ + A + F RGY+++ Sbjct: 4 DRQEATDDFDVLRRVREQRGWTPQQVAERLHIRAAQVEALEQARFEALPGAAFARGYLKN 63 Query: 68 YARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 YARL+ + E LL ++++ K + W M LVL I Sbjct: 64 YARLLDLDPEPLLDLFDRRSNGAGLKPTD-HVLPDSEDPLLDYRWPMLLVSLVLAAAIAG 122 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 W W + P T + + +++ PA+ + Sbjct: 123 IAWWLWGG-------------------------EAAAPATTESMSAAGPSTSAPAASSIS 157 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 + + PAPA +V + + + + + A TAAT Sbjct: 158 SAAASAVRLAVPAPAATASVASVAAATGSAIVAPSQSAATAAT----------------- 200 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT-GQAPYKLKIGAPAAVQI 306 L FT CW++V DA G+ L + + + + G PY++ +G V+I Sbjct: 201 ------GLHFVFTGRCWVQVQDARGQTLLAELAEAGQTIVVDKGLPPYRILVGKAQNVRI 254 Query: 307 QYQGKPVDLSRFIRTNQVARLTLN 330 Y GK + L + VARL + Sbjct: 255 SYDGKSIPLP--VNALGVARLQVG 276 >UniRef50_C1PG13 Transcriptional regulator, XRE family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PG13_BACCO Length = 326 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 101/308 (32%), Gaps = 47/308 (15%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RL+ AR++ G+S + E ++ +++IEE + ++R +I+ YA V + Sbjct: 29 LGNRLKEARKEKGISLDDLQEMTKIQKRYLKNIEEGNYDSMPGKFYVRAFIKQYAEAVGL 88 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG------WLMTFTWLVLFVVIGLS 128 E L + P + P Q + K+ ++ +V ++ L Sbjct: 89 DPETLFEEYQSDIPRTEQEEFPEQLSRVQTSSKRAAPDTVKMMNVLPRILVVAAIIAILF 148 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 W+ + A + +S ++S E +S Sbjct: 149 LLWFVVYKFAGHNTKEKLNSGASGDVSVQKENVKS------------------------- 183 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 A V +N S + T+ PA T + + T Sbjct: 184 -----------AEKVSSGKNTGSSSEKKAAKTSKKPASKTKKTAQKLETVSSSGYTTTYK 232 Query: 249 VADPNALVMNFT---ADCWLEVTDATGKKLFSGMQRKDGNL--NLTGQAPYKLKIGAPAA 303 +A N + W++V ++ G F + + +L+ Q + +G Sbjct: 233 LAGTNQFKLELKANGGRSWVQVKNSDGSTNFQQLLNDGDSRTADLSKQKQVTITVGNTVN 292 Query: 304 VQIQYQGK 311 ++ GK Sbjct: 293 TEVYINGK 300 >UniRef50_B8DPF8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DPF8_DESVM Length = 345 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 118/342 (34%), Gaps = 28/342 (8%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR ARE GL VA R+ + +R IE+ + S + RG+I+SYA ++ + Sbjct: 6 LGIALREAREAKGLDIDDVAIRIKVSARVLRAIEDGEQDQLPHSVYARGFIKSYATVLGV 65 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 + ++ +++ P + ++ + R G + LVL ++ G W+ Sbjct: 66 DNDLVMRVVDETYPFEVPEDLLPETVVAQPHARGRTGLSLVALALVLLTLLAALGGVWYY 125 Query: 135 DRKAQQE-EITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 ++A +E ++ +A + + + + + S + N + Sbjct: 126 RQQASREADLPKVAQPAQPPQADPQPAPAQDAVPAPDAAPASNATNATVSAVAPSVNETS 185 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP--------------------- 232 PA + A S + AA AT Sbjct: 186 PAAGSATQPARTSPAAAASSAAQVPAPAAQAPAQGATPAAAPATPAAPAAAVTGPQGGVY 245 Query: 233 -DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLTG 290 AA + + +V+ ADCW+ + D + + FS K LT Sbjct: 246 DSEAAATSGADTDGSMLAGGTHRIVVIALADCWVHSSADDSDVRQFS--LHKGQTFALTF 303 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 LK+G V+I+Y G+ QV L + Sbjct: 304 SKRLTLKLGNAGGVRIRYNGQEQP--APGDMGQVRTLVFPPQ 343 >UniRef50_C9KPY7 Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY7_9FIRM Length = 311 Score = 131 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 113/325 (34%), Gaps = 30/325 (9%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR ARE+ GL+ + + + ++ + IE+ + + +G+IRSYA + + Sbjct: 2 LGDTLREAREKQGLTYKDIEKGTSIRALYIEYIEKGEYDELPGDVYTKGFIRSYANFLKL 61 Query: 75 PEEELLPGLEKQ-----APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 L+ + AP K + ++ + + KK + Sbjct: 62 DANALVQAFTAERHKGAAPAAQQKPSAPKAAPVKPQAKKPAAKPVEKV------------ 109 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 + A+ E+ + +S + ++ ++ A+ Sbjct: 110 -----ENVAKAEKAEKVEKTASEQPAAPKQEAAPRKAPVQPKATAVKPQPKQQPKKAPAS 164 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ-----AG 244 P TA + N + A V A A + D +A P Q Sbjct: 165 KPAAPRFTAQDFNEPKRSNGKLIAIVAIVLVVLAGAVYALSGSDDSAKKPATQQTQQVEA 224 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 D + FTADCWLEV A GK ++ G +K + G +++G AV Sbjct: 225 PAPKTYDGVEVTATFTADCWLEVK-ADGKTVYEGTLKKGDSQTWKGTDKVTVRVGDAGAV 283 Query: 305 QIQYQGKPVDLSRFIRTNQVARLTL 329 GK DL +T QVA T Sbjct: 284 SFSVNGK--DLGTAGKTGQVANKTF 306 >UniRef50_C7JGR8 Putative uncharacterized protein n=8 Tax=Acetobacter pasteurianus RepID=C7JGR8_ACEP3 Length = 424 Score = 128 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 110/322 (34%), Gaps = 10/322 (3%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR REQLG S + VA L ++ + + +E KA A + G++R+YA+ + Sbjct: 27 VGGALRKRREQLGWSLEDVAAYLRIRDAYLDALETGKADVLPAEVYTLGFLRAYAQALGF 86 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 ++ + R A P F ++ + + VI S W+ Sbjct: 87 DPTPMVERYRLET--RNAIRQPELVFPDPPPDRRIPP---AVSISLGLAVILASYVGWYY 141 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + +S + S + + A + P S + + Sbjct: 142 FTGHTPPAPERVPPVASLLPGEQTHNAPSPQVASILPDKSAVPAPLPPSAQPKPPSAEQA 201 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A + P+ + Q D A T A N Sbjct: 202 LNAQGAASALPESSIAPDTPQPGGDAGTAVAQTP--QQPNAQMPSEAAPAAPAAAVADNQ 259 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ-APYKLKIGAPAAVQIQYQGKPV 313 +V+ A W++V DA GK ++ + + D N+ + PY L +G + ++ G+ V Sbjct: 260 IVLKALAASWVQVKDANGKVVYDHILQPDEEWNVPVEGGPYSLTVGNAGGMVLRM-GELV 318 Query: 314 DLSRFIRTNQVARLTLNAEQSP 335 + R V R + QS Sbjct: 319 T-APLGRNGAVRRKMVLTPQSV 339 >UniRef50_B8DFT2 Conserved DNA-binding domain protein n=16 Tax=Listeria RepID=B8DFT2_LISMH Length = 309 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 113/340 (33%), Gaps = 55/340 (16%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +L+ AR + GLS + + ++ + IEE + R +I+ YA V + Sbjct: 4 LGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVA-------------PMQSFSLGKRRKKRDGW--LMTFTWL 119 L E + P + PM + S+G + R+ + ++ + Sbjct: 64 DSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQSVGNQGNARNRFFDILPKILI 123 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 LF+V L W++ K NS + N T +T + Sbjct: 124 ALFIVFILFIVWFFLLNKQ-----------------DNSTEKVKTDTNNPTVKVEDSTKS 166 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 S DT +T T + +T TA Sbjct: 167 KDTSKDTEKKDTTTEE-------------------DKSTETKDKTEDTAKEVEVTKGETS 207 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFS---GMQRKDGNLNLTGQAPYKL 296 + T D L ++ T D W+ V+DA G + + Q ++L + Sbjct: 208 GNATTYTVKNTDKMTLSLSATGDSWIGVSDANGSTIQNVTLSTQNPSTEIDLGDNKTVSI 267 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 IG ++ GK ++L+ + QV + L A + + Sbjct: 268 VIGNSPVTTVKINGKQLELAPDLVK-QVLTINLEASDTSS 306 >UniRef50_A8VT56 Uncharacterized protein-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VT56_9BACI Length = 302 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 113/329 (34%), Gaps = 37/329 (11%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RL+NAR + G+S + ++ ++ + IE + R +++SY V + Sbjct: 4 LGVRLQNARIEKGISLDELQQKTKIQKRYLEAIENGDFSKMPGDFYARAFVKSYCEAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSF-----SLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 +++ + P + + S +++ L+ + +VL +IG+ Sbjct: 64 SVDQVFEEHAGELPKAKKESGDLPPRIDRPKSRPVKQRSAFSRLLP-SLIVLLFLIGIVS 122 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 W+ + + + + + SV + D T + Sbjct: 123 TLWFTNLGDSSD--------NDSSTREEQQSQPSVDITDDLNEDNDEEDTGETEEPDNSI 174 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 + A + Q+ ++ PS V+ Q + Sbjct: 175 SNGNNTEETDASEEESQEEEIIDPSLEFVELN-----------------DAGQYVYSLSD 217 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN--LTGQAPYKLKIGAPAAVQIQ 307 AD L M F+ W+++ D +G + + ++ TG++ +++G +I Sbjct: 218 ADSFDLEMIFSGGSWIQINDDSG-TVHTDTHGDGDEISFDFTGESEILIRLGFIHTAEIL 276 Query: 308 YQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 P++ + N V + + E S + Sbjct: 277 VNDIPLE---YQSDNDVQNILILHEDSVS 302 >UniRef50_Q12AB7 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q12AB7_POLSJ Length = 350 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 111/322 (34%), Gaps = 8/322 (2%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G LR+ARE GL A+A L + V + +E+D+ + F+R S R + Sbjct: 32 TAGDLLRDAREAAGLHIAALAASLKVPVKKLEALEQDRFDLLPDAVFVRALASSVCRTLK 91 Query: 74 IPEEELLPGLEKQAPLRAAKV-----APMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 I ++L + + R A+ AP S + G R VL +++G Sbjct: 92 IDPTQVLERMPQSPAPRLAQRSASINAPFSSPADGPRASPWKHASRPAVLAVLALLLGAL 151 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 + +E +T + + +E+ QS+P + P Sbjct: 152 VLIFL--PGVAEEPVTVKREAEDGLAVAATEKPQSLPATMVMAGASLASGAAPEVSAAIN 209 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 + + A A Q + + AP A +P A Sbjct: 210 VASASAAEGLAPAAPPGDVAGAPVTPQVAMQSTLPVAPVATAVATLTSPGAALAASAPVT 269 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 + + W+EVTDA G + +G P +G A Q+Q Sbjct: 270 AVPGGIVTFRAKQESWVEVTDAKGAVVLRRTLAPGEVAGASGALPLAAVVGRADATQVQV 329 Query: 309 QGKPVDLSRFIRTNQVARLTLN 330 +G+ DL+ R N VAR + Sbjct: 330 RGRAFDLTAVARDN-VARFEVK 350 >UniRef50_B9MFX5 Putative uncharacterized protein n=2 Tax=Comamonadaceae RepID=B9MFX5_DIAST Length = 322 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 106/336 (31%), Gaps = 37/336 (11%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + + +T G LR RE G+ +A L + + + +E D+ A + F+R Sbjct: 16 QDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHALEADQYDAFPDAVFMR 75 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVA--------PMQSFSLGKRRKKRDGWLM 114 R + +L L + P++ P F G ++ +M Sbjct: 76 ALASGVCRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHRFIKGGTLERPRSRMM 135 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 T +A + V + T P Sbjct: 136 GVT------------------------VAALLAAAVAIAFLPKGNDSLPVASSPEAVTPP 171 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 TA + V + ++ S A +A A A + G Sbjct: 172 QRALEATQLDPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGG 231 Query: 235 AAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPY 294 D G LV+ + W++V +A G + + +++ G P+ Sbjct: 232 TNEAGVDAKGTEA----SGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPW 287 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + IG A ++ +G+P+DL+ R N VAR + Sbjct: 288 SVVIGKADATEVVVRGQPMDLNAIAREN-VARFEVK 322 >UniRef50_Q2W6V6 Uncharacterized protein n=3 Tax=Magnetospirillum RepID=Q2W6V6_MAGSA Length = 434 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 66/370 (17%), Positives = 122/370 (32%), Gaps = 66/370 (17%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA LR ARE +G + A+ L ++ + +E+ + T+ G++RSYA + + Sbjct: 59 GATLRAAREGMGKTLPDCAKLLRIRQLYLEALEDGRHRDLPGGTYAAGFLRSYAEYLGLD 118 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 EE++ ++ + S +G + + L +++ W Sbjct: 119 SEEMVRRFREEGAGGFKNRTELTFPSPV-----SEGRIPGGAVIFLGLILAAVAYGGWYL 173 Query: 136 RKAQQEEITTMA-------------------------------DQSSAELSSNSEQGQSV 164 + + ++T M D++ E+ E + Sbjct: 174 LSSSETKVTEMVPPLPDRLAGVLNRQASLTGEAKTGDVAKPGDDKTKDEVVPPVEAEEDK 233 Query: 165 PLN-------------TSTTTDPATTSTPPASVD------TTATNTQTPAVTAPAPA--- 202 P + T+PA P + P V AP P Sbjct: 234 PSAANPAPAATEPAKVEAPKTEPAKIDAPKVEPPKVEAPKPEPAKVEPPKVEAPKPEPAK 293 Query: 203 VDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT------TPVADPNALV 256 V+P + P A V+ AP A T V T AD ++ Sbjct: 294 VEPPKVEAPKPEPAKVEAPKVEAPKAEPAKVEPPKAETPATAVADGKVYGTEYADSRVVL 353 Query: 257 MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 DCW++V + G L S + R+ + + ++ L +G ++++ G+ V Sbjct: 354 KATGDDCWIQVREVDGSLLMSRLLRRGDSFRVPNRSGLSLMVGNAGSLEVNVDGRKVP-- 411 Query: 317 RFIRTNQVAR 326 QV R Sbjct: 412 ALGAPGQVRR 421 >UniRef50_C4XS50 Xre family DNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS50_DESMR Length = 493 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 102/349 (29%), Gaps = 28/349 (8%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + G LR RE+ GLS V+++ + S + IEE + +G+I++YAR Sbjct: 21 DLREIGTMLREERERQGLSLDTVSDKTKISRSCLAAIEEGNDSLLPHPVYAKGFIKNYAR 80 Query: 71 LVHIPEEELLPGLEKQAPLRAAKV---------APMQSFSLGKRRKKRDGWLMTFTWLVL 121 L+ + E L + P + + Sbjct: 81 LLGVDHAEFASRLSTVYQVEEPTAFRDISLVTDLPDDDCGCSVSSSAPRPPVTLWLAGAG 140 Query: 122 FVVIGLSGAWWWQDRKAQQEEITT--MADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 V++ L+ W+ + + +A ++ + P T P Sbjct: 141 AVLVVLALGWYLFSHVFSGSGASGDEVKPSETATVAPSKPLAAPAPEPTPPVAAPTPVQP 200 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 P APA + PQ + + D A + A Sbjct: 201 APTVPPVVTPTVPPAVTPAPAETLKPQSETAKTGAPTADDKATQDIAVSGPAGSAPAVPA 260 Query: 240 TDQAGV--------------TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 +A T P+ + + CWL+ A G + M K Sbjct: 261 APEATPAAPAAPVAPTAKNFTVGETGPHVVTIAANERCWLQA-GADGGAMHETMLEKGDT 319 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS 334 +++G AV+I + K L V L A+++ Sbjct: 320 FTGRFADNMLVRLGNAGAVEIHFDNKLYPLQA--GKGSVKTLKFVAKKT 366 Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 5/132 (3%) Query: 198 APAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVM 257 A N PS AA A AA+ P + + + + + Sbjct: 363 AKKTDQPTSANGQGQPSAVPQTAAAPTAQPAASLPVASPAVAPTPGPAAENASGAKEVEI 422 Query: 258 NFTADCWLEVTDATG--KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 W+ V+ G K+++ +K + + ++K+G P++V +Y G+ + Sbjct: 423 YGQDGSWVIVSPDKGPSKEIY---VKKGQRITVPFGEKIEIKLGNPSSVVFRYNGQETPV 479 Query: 316 SRFIRTNQVARL 327 + + R Sbjct: 480 TTEKGAIKTIRF 491 >UniRef50_A1SU38 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU38_PSYIN Length = 375 Score = 126 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 93/381 (24%), Positives = 156/381 (40%), Gaps = 58/381 (15%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD----L 56 MN + G L NAR + LS + VA L LK S VR++E+D + Sbjct: 1 MNNDTPQ---IVTPLGLALHNARLKASLSVEQVANLLNLKESVVRELEDDISALIESGKY 57 Query: 57 ASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF 116 A +LRGY+ +YA+LV + ++ + +A + + S+ KKR + + Sbjct: 58 APIYLRGYLANYAKLVALKSLNEFVEYQQFSKHQARDTSLRATASMAPAGKKR--LIPRW 115 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSN----------------SEQ 160 L L +V L+ + Q E T S+E N +E Sbjct: 116 LLLALLLVAILAIVFAKQPDLFFAGEAATKVSAESSENIENKPFNPVAINNEGSPALTET 175 Query: 161 GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSP------- 213 ++ + + T+ A VDTT + A AVV Sbjct: 176 TVGAAVDETISEAVVDTTIGEAVVDTTVSEAAVDETIGEAVVDTTVSEAVVDTTVSEAVV 235 Query: 214 ----SQANVDTAATPAPTA--------------------ATTPDGAAPLPTDQAGVTTPV 249 S+A VDT + A T + + L ++ + P Sbjct: 236 GTIVSKAVVDTTISEAAVDKNINETVIESTVNQTSSANKINTENISVKLENNEQLESPPT 295 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 A +L ++F+ADCW E+ DATG++L G+ ++D L++ G AP+++K+GAP+AV ++YQ Sbjct: 296 AISESLYLSFSADCWTEIVDATGERLAFGLYKQDDILSIDGIAPFEIKLGAPSAVVVKYQ 355 Query: 310 GKPVDLSRFIRTNQVARLTLN 330 GK ++ Q + ++ Sbjct: 356 GKRIE--PDFTAGQTLQFSIP 374 >UniRef50_A1TM26 Putative uncharacterized protein n=3 Tax=Acidovorax RepID=A1TM26_ACIAC Length = 318 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 115/319 (36%), Gaps = 35/319 (10%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 LR AREQ G+ A+A L + V + +E + F+R + S R + I Sbjct: 29 MLRQAREQAGMHVAALAVSLKVPVHKLEALEVGDLGVFPDAVFVRALVSSICRTLKIDAA 88 Query: 78 ELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKK-----RDGWLMTFTWLVLFVVIGLSGAW 131 +L L + QAP ++ SF G + + F L V Sbjct: 89 PVLALLPQNQAPRLSSHEGINASFKPGSAKLASSSAAPGSRKVAFAVAFLLVAAVALVFV 148 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + Q + + D+ S + G T ++P Sbjct: 149 PREWFDRLQGAPSAVTDEPSGVQEAARAGGAPPAPVAGTVSEP----------------- 191 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 V +Q +V + A+ A A++ P A + + + A Sbjct: 192 -----------VLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAA 240 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 +ALV+ D W++V ATG + + R + + G P+ + +G A ++ +G+ Sbjct: 241 QSALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQ 300 Query: 312 PVDLSRFIRTNQVARLTLN 330 P+DL+ R N VAR + Sbjct: 301 PMDLAPVAREN-VARFEVK 318 >UniRef50_C0ZF19 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF19_BREBN Length = 299 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 111/331 (33%), Gaps = 43/331 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L+ ARE+ G++ + ++ + IE + R +I+SYA V + Sbjct: 4 LGQVLQRAREEKGITLDDIQRITKIQRRYLEAIERGHFHVLPGHFYARAFIKSYAEAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKR---DGWLMTFTWLVLFVVIGLSGAW 131 +L + P + + G +T T LVLF+ + + + Sbjct: 64 DPNHILNHFQSDLPAQPPTEQVERLRRRRVASANNPLQAGRWVTKTLLVLFIALIIGVIY 123 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + + +N+ + P+ T A TP Sbjct: 124 F--------------------AVVNNNGGQFTQPVPGGTVNPGAEIVTPGNG-------- 155 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV---TTP 248 A + QQ S + N T P T TP + Q + + Sbjct: 156 -----GGAATSPIAQQPKPPSITTPNPQTGTNPPETVTETPQATITFESQQGSMYNYSLQ 210 Query: 249 VADPNALVMNFTAD-CWLEVTDATGKKLFS-GMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 + + + + W +++ GKK G +KD + +++G P +++ Sbjct: 211 GGEKITVYLKVKEETSWFGISEGKGKKYVEQGTLKKDQEKTIELGKSAYIRLGKPTVLEL 270 Query: 307 QYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 + G VD S+ + + +T+ +++ Q Sbjct: 271 KVNGVLVDTSKM--KSMPSNITMKVKEAVTQ 299 >UniRef50_A0AIJ7 Complete genome n=3 Tax=Listeria RepID=A0AIJ7_LISW6 Length = 321 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 109/321 (33%), Gaps = 47/321 (14%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +L+ AR + GLS + + ++ + IEE + R +I+ YA V + Sbjct: 4 LGDKLKQARREKGLSLDDLQQITKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVA-------------PMQSFSLGKRRKKRDGW--LMTFTWL 119 L E + P + PM + S+G + R+ + ++ + Sbjct: 64 DSATLFDEFESEVPDTPQQEVVNNEPTRVQSKRNPMPAQSVGNQTNSRNRFFDILPKILI 123 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 LF+V L W++ K Q S + T++P Sbjct: 124 ALFIVFILFIIWFFLLNK----------------------QDNSTEKVKTDTSNPTVKVE 161 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 T+ +T + T D +++ + DT+ T T Sbjct: 162 DSTKDKDTSKDTTSKDTTKKDTTSDDKKSTEEANKDKKEDTSKELEITKGET-------S 214 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD---GNLNLTGQAPYKL 296 + T D AL ++ T D W+ V+DA+G + + ++L + Sbjct: 215 GNATTYTVKNTDKMALSLSATGDSWIGVSDASGATIQNVTLSAQNPSAEIDLGTNKTVSV 274 Query: 297 KIGAPAAVQIQYQGKPVDLSR 317 IG ++ K ++L+ Sbjct: 275 VIGNSPVTTVKINDKQLELAP 295 >UniRef50_Q0BUK1 DNA-binding protein n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BUK1_GRABC Length = 426 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 71/367 (19%), Positives = 122/367 (33%), Gaps = 65/367 (17%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 A T G LR RE LG + + +A L ++ + + IEE + +T+ G++R+YA Sbjct: 14 NAQTIGGELRAVREHLGWALEDIAASLRIRTAYLLAIEEGRIGDLPGTTYAMGFVRTYAA 73 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + +E + + +A + L + + ++L VI ++G Sbjct: 74 SLGLDPDETVQRFKTEAGAGHHQQE------LHFPAPVPERGVPAGAVVLLGAVIAVAGY 127 Query: 131 WWWQDRKAQQEEITTM-----------------ADQSSAELSSNSEQGQ----------- 162 W A + +S ++S + Q Q Sbjct: 128 IGWYKLSANHPVPDAVQEVPEHLAPLARKEEAKTPVASPPVASATSQAQPSAPLSASSAS 187 Query: 163 ------------SVPLNTSTTTDPATTSTPPA-------SVDTTATNTQTPAVTAPAPAV 203 +P N + PA A + A QT A AP + Sbjct: 188 PAPVPGAETHAAQIPSNGPASNGPAGAQAETAGASPPSRPAEHQAPGHQTSERAADAPIM 247 Query: 204 DPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADC 263 P S + TP+P ++ PDG P+ + + +V+ +AD Sbjct: 248 SPSAMPPASSQPSLAAGQTTPSPGQSSGPDGVKPV------ASGADKTLHGIVLKASADA 301 Query: 264 WLEVTDATGKKLFSGMQRKDGNLNLT----GQAPYKLKIGAPAAVQIQYQGKPVDLSRFI 319 W++V G L + + + + GQ P L G QI G DL Sbjct: 302 WMQVKSQNGTILLNKVMHAGESWAVPEAQAGQGPLLLTTGNAGGTQIVMDGH--DLPPLG 359 Query: 320 RTNQVAR 326 V R Sbjct: 360 NNGAVRR 366 >UniRef50_C1XSS0 Uncharacterized conserved protein n=2 Tax=Meiothermus RepID=C1XSS0_9DEIN Length = 307 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 13/297 (4%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 TG RL+ ARE G S +A +L L+ + + +EE + + RGY+R YA+++ + Sbjct: 4 TGRRLKEAREAQGRSLAEMARQLSLRKAILEALEECRYEELPEAALSRGYLRRYAQILGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E LL + R+A + + L + W +L +++ +G W+ Sbjct: 64 DPEPLLAEFPAKTGSRSANLTGEAAPPRR--------GLPIWFWTLLLLILIGAGVAAWR 115 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 Q + T + + V Sbjct: 116 LFTIQNKPTTVEVAPPPPPAPPQRVTLRVTTQPPGARVYLDGFLLGQSPVQAPGIEVGER 175 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 + AP P Q + ++ A A P + P PT TTP + + Sbjct: 176 VLRIEAPGFKPYQTTLRLTENKDLSVAL---EVAPPPPAASNPSPTPANPQTTPPTNTPS 232 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 +V+ W+ VT A G+KL+ G+ + L + P ++ G PAAV++ G+ Sbjct: 233 VVLRLEGRSWVRVTTANGQKLYEGIPAQGTVLTYS--QPVVVRAGNPAAVRVTVNGQ 287 >UniRef50_Q5FUT7 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FUT7_GLUOX Length = 423 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 116/335 (34%), Gaps = 23/335 (6%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 ++ + G LR RE+LG + VAE L ++ + +E D + G++R Sbjct: 11 SQPSDQPSVGTVLRARREELGWRLEDVAEWLRIRPKLLAALEADDLSKLPGVAYAVGFLR 70 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 +YA + + + L+ R + A + L + + D L + +V+ Sbjct: 71 TYAHAMQLDADALVERFR-----RDTRGAVTRKPELVFPQPESDRGLPVGVLVGAGLVVV 125 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 ++ W + + + + P S A T P A V Sbjct: 126 VAAYVGWYRFTEHDNPAQRQVPAVAELMPGAATPAMTSPQVASVMPGRAPTPEPHAPVTA 185 Query: 187 TAT------------NTQTPAVTAPAPAVDPQQNAVVSPSQA--NVDTAATPAPTAATTP 232 ++ N P V+A AP+V + V+PS A D + P P P Sbjct: 186 SSVPATPAPAVAPTQNAPAPDVSA-APSVAQSTPSTVAPSVAPLASDDDSEPLPAGEAAP 244 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQ 291 A A P A+V+ A W +V D G L S + + + Sbjct: 245 SQQAGAIGQPATDLPPAVPEGAVVLRALAPVWTQVRDRDGHVLMSRVMQPGESWQGDPAG 304 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR 326 AP+++ G + + G + + QV R Sbjct: 305 APFRMSFGNAGGIVLTTAGATS--APLGKEGQVRR 337 >UniRef50_Q1NPX4 Helix-turn-helix motif n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NPX4_9DELT Length = 333 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 110/325 (33%), Gaps = 26/325 (8%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 L+ G RLR AR G+S AE + + +T+ +EE+ A + RG+IR YA + Sbjct: 28 LSLGERLRRARSAKGVSLAQAAEAIRIHATTLAALEENNREGLPAQVYTRGFIRIYASYL 87 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV-----VIGL 127 + +E L ++ L AA + + T +F+ V+ Sbjct: 88 GLDPDEALRLHIEEQGLPAAATTEKINIQQIMAAESMAEAPRRITGNHVFILLLLLVLAF 147 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 G W + + E TMA++ + + P + T P A Sbjct: 148 VGYWAYTSQSRIGETDDTMAEKG---IFDPLADEMTTPEAAAPTELPELPQALLAPASAP 204 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 A + +V S A A PA + T PD A Sbjct: 205 ADSASNGEPEPTVGSVPEPPATGESNDGAEEPVATPPAGSEETAPDAEAATEA------- 257 Query: 248 PVADPNALVMNFTADCWLEVT--DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 + L FT D WL V D ++LF + +++IG V Sbjct: 258 ----LHLLEAYFTEDTWLRVKIDDEPARQLFFE---AGASRQWRADERIEMRIGNAGGVD 310 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLN 330 + + G P L + QV L L Sbjct: 311 LVFDGTP--LPALGPSGQVVNLDLP 333 >UniRef50_A1HSD8 Transcriptional regulator, XRE family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSD8_9FIRM Length = 248 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 94/311 (30%), Gaps = 78/311 (25%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 T G LR RE+ GL+ + V ++ + IEE A +L+G+IR+YA + Sbjct: 3 TVGEILRREREKRGLTVKDVENATSIRALYINSIEEGNYSAIPGEVYLKGFIRNYANFLG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + +E++ + + ++ + V+ V+I + W+ Sbjct: 63 LNGQEMVNLYRQ-----SQTPQTIEPAVTKTEASSSAFPVKWLVAGVMGVIIAGAVWWFT 117 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + + S + P T Sbjct: 118 AGHQPK-----------------------------SPAPEVKPAPVAPVQPPTVPAQPPQ 148 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 P T PAPA P A P Sbjct: 149 PTQTLPAPAGQPSAKA-----------------------------------------KPV 167 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 + +T CW VT A GK+++ G + + +K+G V++ + G+P Sbjct: 168 IITAKYTDACWTLVT-ADGKEIYEGTPNAGDSFTWEAERNIVIKLGNAGGVELSHNGQP- 225 Query: 314 DLSRFIRTNQV 324 L + +V Sbjct: 226 -LGKLGAKGEV 235 >UniRef50_Q81A13 Transcriptional regulator n=70 Tax=Bacillus cereus group RepID=Q81A13_BACCR Length = 303 Score = 123 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 108/334 (32%), Gaps = 45/334 (13%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +L+ ARE GLS + E ++ + IEE + + R +I+ YA V + Sbjct: 4 LGQKLKEAREAKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGK--RRKKRDGWLM---TFTWLVLFVVIGLSG 129 EELL + P + P S +K W + LV +VI + Sbjct: 64 NGEELLVEHQSTIPQSEKREVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGV 123 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 W+ + ++ + S ++ ++ + PL+T A Sbjct: 124 VIWFVFQALTGKDDEKVPSAQSEKIE--VQKAKDSPLDTKKDEVKAEEPKKEEPKKEEPK 181 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 + PA T + T T + Sbjct: 182 KEEQPA--------------------------------QPTGQQEVKVVGTTGKVSTLEI 209 Query: 250 ADPNALVMNFTAD--CWLEVTDATGKKLFSGMQRKD--GNLNLTGQAPYKLKIGAPAAVQ 305 + L + + +++V D G + + ++ +++ +L IG V+ Sbjct: 210 HNNKTLELELSGKGASYVDVKDDAGNVILNATVQEGQIEKRDVSTLKEVRLNIGNATNVE 269 Query: 306 IQYQGKPV--DLSRFIRTNQVARLTLNAEQSPAQ 337 ++ G+ V L +Q + + PAQ Sbjct: 270 VKLNGQVVAYPLDPEKELHQRLVIKNQGIEQPAQ 303 >UniRef50_Q30ZR3 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZR3_DESDG Length = 328 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 103/328 (31%), Gaps = 17/328 (5%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR ARE G+S + +R + + IEE + + + +G++++YARL+ Sbjct: 6 LGQALRQAREARGMSLKDAEKRTKIAARIISSIEEGRNDSFPHPVYAKGFVKTYARLLEF 65 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD----------GWLMTFTWLVLFVV 124 E + +E++ + + L + ++R L +L + Sbjct: 66 DAELVRSVVEQEFVDDSDDDPVLPPPKLVVKPRRRTAPLVAGLLVVVLLAAGGYLAYRYL 125 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 + A Q Q +++ + +S+ S + + A Sbjct: 126 VAPVVAEKQQRSDTVQSNGSSVPAAAVPAVSTPSAAEGNATSVQGNAAESAEPVNETGKA 185 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 + A + A +Q V A AP P A Sbjct: 186 SSGAASRAVAPAPAEMAVAADTAGTGAQTAQQPVPQKAPVAPPVPAVPVPQAEQAPVAGQ 245 Query: 245 VTTPVADPNALVMNFTADCWLEVT--DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 A L + DCW+E D ++LF R + +K+G Sbjct: 246 KKAAAAGEQQLRVEARLDCWIEARMDDVRDQELF---LRAGQAVVFRFDKSLSVKLGNGG 302 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V ++ G+ V + V L Sbjct: 303 GVDVKLNGRAVPVEA--APGDVVTLQFP 328 >UniRef50_D1B786 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B786_THEAS Length = 293 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 98/310 (31%), Gaps = 39/310 (12%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LR RE GLS + V ++ + + IE + + RG++R+Y + Sbjct: 3 SLGGALRAMREGQGLSLEDVERDTKIRRAFLEAIESGEVQRIPGMAYARGFVRNYCEYLK 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 P+ L P ++ +V + R+ WL + VL + + + Sbjct: 63 APD--LWPRFDELLRGDQDEVLGSYAPPRTAFRRSSRWWL----YAVLVGAVAFASYLLF 116 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 Q Q+ M + + + + +G + D +P + + Sbjct: 117 Q---QWQDFKARMMESVITKPAEPTLEGPQDQAQVPASEDLVVEVSPDQPGQGAVSGAVS 173 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + ++D +P + AP Sbjct: 174 GEPVSGEASMDLSWMDGGAPKEPKEAEERRGAP--------------------------- 206 Query: 254 ALVMNFTADCWLEVTD-ATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 + + CW++VTD A +F G + ++ ++++G + + + Sbjct: 207 GVTVRAIGVCWVKVTDLANNAVVFQGTLKDGQEMSFESPKGLRVRLGNAGSASL--KTSS 264 Query: 313 VDLSRFIRTN 322 +LS Sbjct: 265 AELSPAGPKG 274 >UniRef50_UPI0001A447F2 hypothetical protein PcarcW_15601 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A447F2 Length = 187 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 104/183 (56%), Gaps = 2/183 (1%) Query: 152 AELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVV 211 A +GQSVPL + T T S +T + P+ + Sbjct: 5 ASSIQAQTEGQSVPLMDNGTAQEMATPGSAPSPASTPVDLSATGTETPSTPSSVSTPSAA 64 Query: 212 SPSQANVDTAATPAPTAATT--PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTD 269 SQ+ + A TA GA PV+ +ALVM FTADCWLEVTD Sbjct: 65 PSSQSPLHANAAQPQTAGNVLLGAGAVAPAAGTVAEANPVSAAHALVMTFTADCWLEVTD 124 Query: 270 ATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 A+GKKLFSGMQR G LNL GQ+PYKLKIGAPAAVQIQ+QGKPVDLSRF+R++QVARLTL Sbjct: 125 ASGKKLFSGMQRNGGTLNLDGQSPYKLKIGAPAAVQIQFQGKPVDLSRFVRSSQVARLTL 184 Query: 330 NAE 332 AE Sbjct: 185 TAE 187 >UniRef50_A9HJ46 Putative uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJ46_GLUDA Length = 404 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 107/332 (32%), Gaps = 25/332 (7%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR REQLG + VA L +++S + +E+ + + + G++R+YA+ + + Sbjct: 22 VGPTLRARREQLGWALPDVATWLRIRLSYLEAMEDGRVKDLPGNVYTVGFLRTYAQALGL 81 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW-- 132 E L+ + +A P SF +M V V+I W+ Sbjct: 82 DAESLVARFKAEA-RDNIDYKPELSFPAPVPGSAVPAGVMALLGGV--VIIAAYVGWYRM 138 Query: 133 --WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 Q QQ A + S Q SV + P S S T Sbjct: 139 TGVQSVPPQQVPSVYSAIPGMTRQAPTSPQVASVLPSGRPIGPPQPLSNAERSAITDGDV 198 Query: 191 TQTPAV-----------TAPAPAVD----PQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 + T P AV Q V AA P P + Sbjct: 199 PAPAPLAAPTPAVPPQGTTPQGAVTQGTVTQGTLAQGNGTPGVGDAAVPPPAGPSQSAMQ 258 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQAPY 294 P A +++ +A W++V A G ++ + + + ++ + Sbjct: 259 PVPQPAPVAAAPPTAPAGQMMLTASAQTWVQVRVAGGPVIYDHILQPGESWSVPPDRTNL 318 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR 326 L +G + + G V R V R Sbjct: 319 LLTVGNAGGLVLSADG--VTTQPLGRNGAVVR 348 >UniRef50_C3AP52 Transcriptional regulator n=5 Tax=Bacillus RepID=C3AP52_BACMY Length = 308 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 99/309 (32%), Gaps = 37/309 (11%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G +L+ ARE GLS + E ++ + IEE + + R +I+ YA Sbjct: 4 VTELGQKLKEAREAKGLSIDQLHEVTKIQKRYLVTIEEGDYSILPGAFYARAFIKQYADA 63 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT-----WLVLFVVIG 126 V + EEL+ + P + P S + + + L+ +VI Sbjct: 64 VGLNGEELIVEYQSVVPQSESHDVPQISKGQKTQETMQKAASLPIADHMSKILIALLVIA 123 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + A W+ + ++ + S ++ ++ ++ PL+ A Sbjct: 124 VGVAVWFVFQWLIGKDEGQVKQTKSEQIE--VQKAKNSPLDEKKEEVKAEEPKKEEPKKE 181 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 + PA P A + + Sbjct: 182 EPKKEEPPAQQPP----------------------------AGQEEVKLVGTSGKVSTLE 213 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN--LNLTGQAPYKLKIGAPAAV 304 L + ++++ + G +F+G ++ +LT L IG+ V Sbjct: 214 IHNNKALELEITAKGASYVDIKNEGGNVVFNGTLQEGQTEKHDLTTAKEVLLNIGSAPNV 273 Query: 305 QIQYQGKPV 313 +I+ G+ V Sbjct: 274 EIKLNGQVV 282 >UniRef50_C6KUI1 XRE family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6KUI1_9BACT Length = 316 Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 73/336 (21%), Positives = 123/336 (36%), Gaps = 28/336 (8%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+T+ A++ G +LR ARE G + VA RL ++ + V +E D A T+ Sbjct: 1 MSTDEFASD-PAVSAGQQLRRAREGRGWTLVQVAGRLHIRPALVEALECDDYAPFGAVTY 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RG +R+YA L+ + +L G+ + K+A WL+ Sbjct: 60 ARGQLRNYAALLGLDASSVLQGVTPPRLDQPGKLARN-----APELHPGRPWLVRLGGAA 114 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + +V+ + GA W + + ++ A S A ++S S A + Sbjct: 115 VVLVLAVLGALWADAHRERAPQVAQPALSSGAAVASGS----------------APLAQD 158 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A T + T A A + + A G+ Sbjct: 159 AAQPRTVPAHEPTAQAEALPAEAPAAGVATGEQPELSGAGQGEQQTAPAAEQAGSVTAAV 218 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 D A L++ A W EV+D++G++L + + G P +L +G Sbjct: 219 DDEAALDGQA---ELLLRTRAVSWAEVSDSSGRRLIYDLLSPGREHTVRGLPPLRLLLGN 275 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 V++ Y G PV L V R+ L + S A Sbjct: 276 APVVEVIYNGAPVALPA---GEHVVRMRLGSAPSTA 308 >UniRef50_B7GJN6 Uncharacterized HTH XRE-family DNA-binding protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJN6_ANOFW Length = 286 Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 105/321 (32%), Gaps = 62/321 (19%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RL+ AREQ +S + E ++ + IE+ ++R +IR YA V + Sbjct: 7 LGKRLKEAREQRNMSLDDLQEITKIQKRYLIAIEQGNYVIMPGKFYVRAFIRQYAEAVGL 66 Query: 75 PEEELLPGLEKQAPLRAAKVAP-----MQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 +EL + P + P ++S L ++ +K L L V + + Sbjct: 67 DPDELFEQYANEIPNAQQEELPGELSRVKSRQLSEQGEKVLDILPKILIGTLAVGVAVVL 126 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 +++Q R ++ + ++ + S Q Sbjct: 127 WFFFQSRTVDEQPQEQVINEKTEFEQSEQVNEQ--------------------------- 159 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 Q + Q + P+AA + +T Sbjct: 160 -----------------QPEKQNEQQPEKEKEQQEQPSAA-----MVKVVDTNGRKSTLE 197 Query: 250 ADPNALVMNFT--ADCWLEVTDATGKKLFSGMQRKD--GNLNLTGQAPYKLKIGAPAAVQ 305 L+++ D W+EV + GK M + +LT + L IG + Sbjct: 198 VMAEQLIIDIATKGDAWIEVKNGKGKAFTRKMMYANQAETFDLTNETEVLLVIGQTLNTE 257 Query: 306 IQYQGK----PVDLSRFIRTN 322 ++ G+ PV+ S +R + Sbjct: 258 VKINGQTLQYPVNPSDHVRQD 278 >UniRef50_B7R9Q0 Putative uncharacterized protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R9Q0_9THEO Length = 267 Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 95/301 (31%), Gaps = 52/301 (17%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L++ R + G++ + + E ++ ++ IE+ A + +G+++SYA + + Sbjct: 4 LGEFLKSERLKKGMTLEEIQEITKIRTRYLKAIEDGDFSVMPAMVYAKGFVKSYAEALGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E++ E K ++ S K KK + +WL + L Sbjct: 64 DGNEIVKKYEYLF-----KEKEEENLSKAKSYKKTT---LDLSWLFSALKKALVSILIIG 115 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + A L E Q+VP T + P+T ++V Sbjct: 116 IIGYGFYYFFAQIKKGLAPLPPEQEVSQTVPEKNETPSAPSTQENVTSTV---------- 165 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 + T + + +P + Sbjct: 166 --------------------------------SPKTVIEKVSETSKKIEYKISPASQSYK 193 Query: 255 LVMNFTAD-CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 + +N + CW + G ++ G+ + + +G P AV+I G+ + Sbjct: 194 VEINMVGEKCWFSIK-VDGNVVYEGLMTAGMMKTFEVKNDITILMGYPPAVKISVDGEEL 252 Query: 314 D 314 Sbjct: 253 P 253 >UniRef50_A7NIS6 Transcriptional regulator, XRE family n=5 Tax=Chloroflexaceae RepID=A7NIS6_ROSCS Length = 279 Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 99/322 (30%), Gaps = 56/322 (17%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 +N G RLR ARE G+S A + + +E+ ++RG+IR+ Sbjct: 10 QENAMSQLGERLRAARESQGISLSQAAAETRILQRYLVALEDGDYQNLPGDVYVRGFIRN 69 Query: 68 YARLVHIPEEELLPGLEKQAPLRAA-KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 YA + + +EL+ + ++ P S + G + V FVV+ Sbjct: 70 YAAFLGLSADELIDLYRYERGRTDPIRIVPATSNPRVR------GCIAPSLVGVFFVVLA 123 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 L G T S+ + Q ++P AT P+ + T Sbjct: 124 LVGV--------------TYLVLSATNRIGENAQLATIPT--------ATIPPAPSPLPT 161 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 + PA A V+ PS + P G P Sbjct: 162 ALPEATPVPIIIPATATVAVAGGVIEPSPTSTQEPEAPIVLEVRIDPGDNPG-------- 213 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 WLE+ G+ +F + ++ T + ++ G A V + Sbjct: 214 ----------------SWLEIK-TDGESVFRRVLAPGRSVRFTARRSVSVRAGNAAVVTV 256 Query: 307 QYQGKPVDLSRFIRTNQVARLT 328 + L R +V Sbjct: 257 VINDQERRLG--TRPGEVVTFE 276 >UniRef50_A0LV12 Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LV12_ACIC1 Length = 273 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 106/323 (32%), Gaps = 64/323 (19%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 ++ G L ARE+ GLS + VA R L+ S +R +E D + R ++R+ A +V Sbjct: 1 MSIGQSLAEARERAGLSIEDVAARTRLRASVIRAMENDDFSLCGGHFYARAHLRTLAGVV 60 Query: 73 HIPEEELLPGLE-----KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 I LL + + AK+A +++ S R + + + +++ + Sbjct: 61 GIDPAPLLAEYDARYGRNEDDDVTAKLAEVETASKLIARTQELRRTSWGSLALAALLVVI 120 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 A Q + + + P ++ + Sbjct: 121 IVAVGAQLLTSHGR---------------------------TPSRASGPVGAPSSASGPS 153 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 + TP+++A + P +PS A + Sbjct: 154 PSAAATPSISAVPSSGSPSPPPTGAPSSAVAE---------------------------- 185 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 A +V TA CW+ + G L+ G+ T LK+G A + Sbjct: 186 --AGVKVVVRVTTAKCWVLARASDGTTLYQGIMNPGDVQTFTDPQQIYLKLGNAPATDLV 243 Query: 308 YQGKPVDLSRFIRTNQVARLTLN 330 G V++ TN VA T Sbjct: 244 VNG--VEIGAPPSTNDVAAFTFG 264 >UniRef50_Q8D1Y4 YfgA protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D1Y4_WIGBR Length = 158 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 87/143 (60%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN + + + T G L+ ARE LG SQ+ V+++LCLKVST++DIE + ++L TF Sbjct: 1 MNNDDKEKKINSNTVGKSLKTARENLGWSQEKVSKKLCLKVSTIQDIENNYINSNLDKTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 L GYIRSYARLV + ++ L +E K+ +F + KK+D WL+ TW++ Sbjct: 61 LYGYIRSYARLVKLTDKNFLVLIENNKKNNFNKIKSTSNFKKLIKYKKKDIWLIRITWIL 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEI 143 F++I L+G WWW++ ++I Sbjct: 121 FFIIIILTGMWWWKNYHTNNKDI 143 >UniRef50_Q2B1K4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B1K4_9BACI Length = 304 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 103/322 (31%), Gaps = 36/322 (11%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L+ AR + G+S + ++ + IEE ++R +I+ YA V I Sbjct: 7 LGNHLKEARIERGMSLDDLQTATKIQKRYLVGIEEGNYSMMPGKFYVRAFIKQYAEAVGI 66 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 EEL + P+ AA + S + RK G L+ ++IG+ Sbjct: 67 DPEELFEQYKNDIPVTAASDDIPEKLSRVQTRKNISGSSSRLADLLPKILIGVFVV---- 122 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 +A + +N+ + + P + T + + + Sbjct: 123 ---------GVIALLYYFIVMANNGKDEGEPADNGNTQGVEYGQSDDLAKEEPKEEDGQE 173 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A +P + P V + AD Sbjct: 174 EGGGAAEEEEPAEEEKPEPPAQEV---------------AVVESAGNDTVYEVKNADQFV 218 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDG----NLNLTGQAPYKLKIGAPAAVQIQYQG 310 L + T + W+ + + G F GM K ++L+ + L +G + ++ Sbjct: 219 LKVVSTGETWVSIKNGKGYSFFEGMLLKGSAESQTIDLSKEPEAVLVVGNTSQTELYIND 278 Query: 311 K----PVDLSRFIRTNQVARLT 328 + + S+ ++ + R T Sbjct: 279 QKLEYAIPSSQSVKQDITIRYT 300 >UniRef50_B1VXY3 Putative uncharacterized protein n=13 Tax=Streptomyces RepID=B1VXY3_STRGG Length = 266 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 95/323 (29%), Gaps = 70/323 (21%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 +++ + G L+ AR GL+ + V+ +++ V IE+D + RG+I Sbjct: 5 NSPEDDRPSIGRALQQARIAAGLTVEEVSSSTRVRIPIVHAIEQDDFSRCGGDVYARGHI 64 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 R+ AR V + E L+ + R A F + R + Sbjct: 65 RTLARAVGLDPEPLVEEYDADHGGRPAPTPAAPLFEAERIRSEPR--------------- 109 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 R + + G+ P NT+ + + A Sbjct: 110 ----------RPNWTAAMVAAIVAVIGFVGFTLFSGEDEPSNTAQIAEGSQPDKTAAKPT 159 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 T P + A A P+ V S Sbjct: 160 ATKPADPKPVPSESAIAAAPRDKVTVKLSAD----------------------------- 190 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 W+ D G++LF G+ + + + L +G A+ Sbjct: 191 --------------RGKSWISAKDHNGRQLFDGLLLQGESKTFQDKERIDLVLGDAGAID 236 Query: 306 IQYQGKPVDLSRFIRTNQVARLT 328 + GK V+ RF QV RL+ Sbjct: 237 LFVNGKQVE-DRFGP-GQVERLS 257 >UniRef50_C7QRV5 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=C7QRV5_CYAP0 Length = 368 Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 118/368 (32%), Gaps = 43/368 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + + GA LR R LS + VA +++ ++ +E + + Sbjct: 1 MTKYNSTQTQQLQEIGAYLRQKRLASSLSLEQVASSTFIRLPILKALEGGEVDQLPELIY 60 Query: 61 LRGYIRSYARLVHIP------------------------------EEELLPGLEKQAPLR 90 ++G++R Y +++ E L L A Sbjct: 61 VQGFLRRYGEALNLDGQALAKKISPNTEETALEIPAELVATGGSRLEPLGEDLSSPAIRT 120 Query: 91 AAKVAPMQSFSLGKRRKKRD---------GWLMTFTWLVLFVVIGLSGAWWWQDRKAQQE 141 + P S S + ++ G+ + + F ++G + + Sbjct: 121 NTESLPENSPSTKEVIPQKPKQPSISPNLGFSKLRVYGLYFALLGGAVLGLFYVFSRPHS 180 Query: 142 EITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAP 201 +T+ + SS L S Q P + ++ P TA P Sbjct: 181 PQSTVKNPSSEILKQASTVAQKSPPELPKAVEETQPKLDRIVSSDQPSSIIEPVPTAS-P 239 Query: 202 AVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTA 261 VD A P + + P+P + VT P A ++ Sbjct: 240 EVDATPQASPQPEPDIEQSTTQQPINNQESELVQTPVPEPSSPVTESQTGPVAAAVSLEE 299 Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 D W++V GK + G+ +K + T Q +++G AV + KP + + Sbjct: 300 DSWMQVK-IDGKTEYEGILKKGEQQSWTAQETLIIRVGNAGAVNLSVNNKPGE--KLGEL 356 Query: 322 NQVARLTL 329 +V ++TL Sbjct: 357 GEVKQVTL 364 >UniRef50_Q3A2Z7 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2Z7_PELCD Length = 311 Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 116/321 (36%), Gaps = 42/321 (13%) Query: 1 MNTEATHD---QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M+ +T D + + G +L+ RE +GLS QAVAER ++ + +R E+D A A Sbjct: 1 MHDTSTEDSPAEVPVASLGKQLQERREAMGLSLQAVAERTRIRSAYLRSFEDDDYEALPA 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVA--PMQSFSLGKRRKKRDGWLMT 115 + + G++R YA L+ + E+ L A A ++ P S + Sbjct: 61 AAYAVGFLRQYATLLGLDAEQALKEFRGAAQSVAQPLSQLPTPENSGTELEPAGKKRPGF 120 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 WL++ + L W + + +P++ + T Sbjct: 121 PIWLLIALGAILVAGWLFYVENRE----------------------TWIPVSKESATPAL 158 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 S P A + + ++ ++ A P + A A+V + A Sbjct: 159 PASEPAAGISASQSSMKSDAAPEPQSSPPSASEASAPVQDADVPVETSEA---------- 208 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 ++ A + A + W+E+ +A + L + + + T + Sbjct: 209 ----SEDALIFPLPAGGAVFRIASKGSGWVEI-EADRRPLQNYDMQPGTRVEWTVHDFAE 263 Query: 296 LKIGAPAAVQIQYQGKPVDLS 316 +++ P VQ G+ V L Sbjct: 264 IRVSIPGGVQAWLDGREVSLP 284 >UniRef50_A0LP00 Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LP00_SYNFM Length = 309 Score = 117 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 111/322 (34%), Gaps = 23/322 (7%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 L++ R + G++ +++ + +ST++ +E + ++ ++R+Y + I Sbjct: 8 LKSVRLERGITLDSISRNTGMSLSTLKALEAANWDKLDSLLLVKNFVRAYCSALGIDSAA 67 Query: 79 LLPGLEKQAPL---RAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 +L + +A +S KR +KR G + + G W Sbjct: 68 VLEKYAADIRACNRQNEYLARYAKWSKVKRSRKRLGPFGMLLLGIGLSGLASGGVWI--- 124 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 A++ + + + S E +P+ + P PA V PA Sbjct: 125 --AEKRARVSQTPPIAKTVYSQQEFPTDLPVRANPVAKPE-PKVEPAPVAPVVETAAAPA 181 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 V PA Q+ + + AA P G + A + Sbjct: 182 VKEPAETPVQQEVVEAGEVRTAQASGLPNEVLAAGEPAG-----------PSETARKHVF 230 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 + + W++V + G+ S M + ++ +G V++ + G+PVD Sbjct: 231 AVAASEKTWIQV-EMDGRITQSAMLHPGETREWKAEKGMRVVVGNLGGVRMSWNGRPVD- 288 Query: 316 SRFIRTNQVARLTLNAEQSPAQ 337 R+ QV R L Q + Sbjct: 289 -APGRSGQVLRFHLPDPQYVKE 309 >UniRef50_A5D2R2 Uncharacterized protein conserved in bacteria n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2R2_PELTS Length = 258 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 98/322 (30%), Gaps = 69/322 (21%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G +LR RE GL+ +AV E ++ + +EE+K + R ++++YAR + Sbjct: 1 MEIGKKLRETRENRGLTLEAVEEETKIRRKYLHAMEEEKFHILPGPVYARAFLKNYARFL 60 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG-WLMTFTWLVLFVVIGLSGAW 131 ++ EE++ +++ K KR + R+ + +L VI A Sbjct: 61 NLNVEEIMELYKQRFEAIPEKADEPSEKPAEKRTRDREPAKPRYWLYLAAAAVIVSIVAA 120 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + ++ T A + + T Sbjct: 121 LYYGTAGFDQKRTVDY----------------------------------AGEEAGKSET 146 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 P++ P P TA P G A Sbjct: 147 APPSLQTDEPLQTPGGQ----------------QQTAGQEPAGQAA-------------- 176 Query: 252 PNALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 LV+N W+ V D G F G + + + +G V++ Y G Sbjct: 177 GVDLVLNIKDSRSWIAV-DVDGVNAFEGELSAGQSKAFQAKERISVTLGNAGVVEVIYNG 235 Query: 311 KPVDLSRFIRTNQVARLTLNAE 332 + +L V A+ Sbjct: 236 R--NLGFLGGVGSVVSREFKAQ 255 >UniRef50_A5WGQ2 Uncharacterized protein-like protein n=3 Tax=Psychrobacter RepID=A5WGQ2_PSYWF Length = 281 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 84/213 (39%), Gaps = 9/213 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G RL+ AR LS VA L + + IE + + + F RG++ +YA+ + Sbjct: 22 SFGNRLKQARINKNLSIDDVAAELFILNRHLEAIEAEDFRSLPQAAFARGFVINYAKFLG 81 Query: 74 IPEEELLPGLEKQAPLRAAK------VAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 + ++++ + P K +P++ +R +R + L + +I L Sbjct: 82 LDPDQIVDSFNRNYPDELKKKSVDDIESPLKPMGTLQREGRRSIRINPLLVLGVIGLIVL 141 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 + AQ D + + S+SEQ +NT+ + + ++V + Sbjct: 142 AVFLIRTVSNAQDATAVETDDNALVDDLSDSEQSAGAAINTAVVSGGSALDNTGSAVASN 201 Query: 188 ATNTQTPAVTAPAP---AVDPQQNAVVSPSQAN 217 T+ + VD N ++S +Q+ Sbjct: 202 TTDANLDLTVSANTQLNVVDATGNTLLSGNQSA 234 Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%) Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 T + A AV+ NA+V + +A TA + G + L + V + D Sbjct: 148 TVSNAQDATAVETDDNALVDDLSDSEQSAGAAINTAVVS--GGSALDNTGSAVASNTTDA 205 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 N L + +A+ L V DATG L SG Q L G+AP+K++I + V + G+P Sbjct: 206 N-LDLTVSANTQLNVVDATGNTLLSGNQSAGS-YKLAGKAPFKIQIDQVSNVALNLNGQP 263 Query: 313 VDLSRFIRTNQVARLTL 329 ++L+ F + N+ A +L Sbjct: 264 IELNDFAQDNK-ANFSL 279 >UniRef50_C0GKG3 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKG3_9FIRM Length = 283 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 103/323 (31%), Gaps = 64/323 (19%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L+ ARE GL+ +A++ + ++ +EE +L+G +R YA V + Sbjct: 4 IGQELKQAREDRGLTLEALSSSTLIAKKYLKALEEGDFDQFPGEVYLKGALRKYATEVGL 63 Query: 75 PEEELLPGL----------EKQAPLRAAKVAPMQSF---SLGKRRKKRDGWLMTFTWLVL 121 E LL + + P K PM + R+ G L F ++ Sbjct: 64 DPEPLLTRYTGTEAQTDNQDNEQPKPVEKKKPMPEAVMKNYNTVRRINKGRLAMFVLVLA 123 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 + +G+ + D ++ PP Sbjct: 124 LLFVGVRAIL--------------------------------------ISADSPASTEPP 145 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 A D QTP PAP +P + + A Sbjct: 146 ALEDNELPGEQTPD-DQPAPDGEPAEEEEPEDVEEQEPEMRIEAED-----------IQG 193 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 T AD + ++F+A CW+ G + F ++ + + + GA Sbjct: 194 GERFTVYNADSLVVDLSFSARCWVRAH-TDGSQEFEHTFSAGDERSVRAENELRFRFGAA 252 Query: 302 AAVQIQYQGKPVDLSRFIRTNQV 324 +AV ++ G+ ++L + V Sbjct: 253 SAVTVEVNGETIELPQSGNAYNV 275 >UniRef50_Q82K94 Putative membrane protein n=8 Tax=Streptomyces RepID=Q82K94_STRAW Length = 298 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 97/318 (30%), Gaps = 66/318 (20%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + + G L+ AR GL+ V+ ++++ V IE+D + RG++R+ AR Sbjct: 38 DRPSIGRALQQARIAAGLTVDDVSNATRVRIAIVHAIEQDNFAPCGGDVYARGHLRTLAR 97 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 V I LL + R A F + R +R G Sbjct: 98 AVRIDPAPLLAQYDADHGGRPAPTPAAPLFEAERIRPERRGPN----------------- 140 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W +A S G T Sbjct: 141 --WTAAMVAAIVAVIGFVGFTAVKGSGGGDGT----------------------KTQVAE 176 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 TP+ + PA + P++ V P D+A AP T +A Sbjct: 177 GSTPSTSKPA-SPTPKKAKPVDPKPDVSDSAIAAAPRDKVTVQVSAA------------- 222 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 W+ D G+ LF G K + + +L +G AVQ+ G Sbjct: 223 ---------DGRSWISAKDHNGRLLFDGTLEKGDSKTFQDKEKIELVLGDAGAVQLFVNG 273 Query: 311 KPVDLSRFIRTNQVARLT 328 K + + QV RLT Sbjct: 274 KQI--QDEFQAGQVERLT 289 >UniRef50_Q8YY03 Alr1052 protein n=2 Tax=Nostocaceae RepID=Q8YY03_ANASP Length = 292 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 44/332 (13%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN + + L R++ G+ + VA + +++ ++ ++ K + Sbjct: 1 MNLLNEAQEQQLKEISKYLLQVRQEKGIRIEEVAAKTNIRLYFLQCLDAGKFAELPEPVY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++G+IR YA ++ + + L + + + +++ + F V Sbjct: 61 IQGFIRRYADILGLDGQALAKTFSVSG---ESAIQESHRHEEEQIKQRPKLRIPLFVPYV 117 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L + + G + + K + + +SE N S T TP Sbjct: 118 LLLAVAAVGLIYVLNPKLITQSLAN---------KQDSETTTPKQANPSPLTVAPQAQTP 168 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P V +N+ S + A+V ++T P+A Sbjct: 169 D----------------LPESIVSDSENSSTSSTTADVGDSSTTTPSATL---------- 202 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 G A+ + + WL+VT A GK F G K T + ++ G Sbjct: 203 ---GNENNANSAVAVTLELQGNSWLQVT-ADGKTEFVGELTKGDRRTWTAKKQLTVRSGN 258 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 AV + KP + V +T E Sbjct: 259 AGAVLVSVNEKPAE--PLGSNGIVKEVTYTPE 288 >UniRef50_B3DYX2 Predicted transcriptional regulator contains Xre-like HTH domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DYX2_METI4 Length = 369 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 124/360 (34%), Gaps = 40/360 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M +Q T G RL+ ARE GLS Q V++ + + +E+D+ AST Sbjct: 1 MRRRKIMEQGMKQTIGQRLQAAREAQGLSLQTVSKITKILPEQLAALEQDQYEKIPASTQ 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKR----------RKKRD 110 +RG++R YAR + + E+ LL L+ R + + + ++ Sbjct: 61 VRGFVRIYARTLGMDEKPLLDELDNIFGFREEDNHLLITLPVKYVDPTVEKEPFFTPQKI 120 Query: 111 GWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQ------------SSAELSSNS 158 + F VL IGL + + ++ + +Q + Sbjct: 121 AFFFAFLLFVLMCSIGLYRIYQVTSFRHGPGKMASHEEQIRKSPELKPSILEPLTKEQPT 180 Query: 159 E-------QGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQN--- 208 E Q +++P+ +T P P +++ + +P ++ +N Sbjct: 181 EGSQGNLFQVENIPVKRATPLHPIKPEEKPQEQSLSSSPSSSPPPSSANAEASNTENVKI 240 Query: 209 ----AVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 V N++ + +A + LV+ D W Sbjct: 241 MRALPVTPEPVPNLEDHPRTKDGEIESDADSADENNTDEPAVSFAEKNYKLVVQARKDSW 300 Query: 265 L---EVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 + + K++FSG+ + G ++++ + V+ GK + ++ + Sbjct: 301 IFIQVIEGGKAKQVFSGVLHGGEHKEFIG-PRFQIRASNVSQVEFILDGKSISVASAGES 359 >UniRef50_D1CBL2 Putative uncharacterized protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBL2_THET1 Length = 312 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 96/312 (30%), Gaps = 17/312 (5%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G LR+AR GL+ + V++ + ++ ++ +EE++ + + + ++R YA + Sbjct: 3 DIGEALRDARLSKGLTYEYVSQIIKIRPEFLKAMEENRFDLLPGAFYAKNFLRRYADFLG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + + L+ + ++ + G + L+ + + G Sbjct: 63 LDSDALVESFNELEAAHEQHISAAANTVSKGHISPSFGAIAVALVLIAAIAVLAYGVVVS 122 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 K E I T + + ++ + + + T + STP Sbjct: 123 PRNKHVAEVIPTPSIFPTIPPTTPTPTVSRIVNVPTPTLVSQSKSTPTV----------- 171 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 P+P N + N D + +T + VA Sbjct: 172 ----QPSPTPTSTPNNSQKTAGNNEDKRQSADNQRSTDKRKNQRSHKTRKESKKKVAGNV 227 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG-KP 312 + A + V A G +FSG + + + + + G Sbjct: 228 IAHIKTLAIGNVVVR-ADGDVVFSGTMKPGQEKDFGAYNQLYIYSNNAQNLLVSVNGCSA 286 Query: 313 VDLSRFIRTNQV 324 L ++ V Sbjct: 287 KTLDQYGCPGCV 298 >UniRef50_B7A9Q8 PEGA domain protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9Q8_THEAQ Length = 287 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 100/309 (32%), Gaps = 32/309 (10%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RLR ARE GLS + AERL LK + +E + A RGY+R YA L+ + Sbjct: 4 LGERLRRAREAKGLSLKEAAERLALKAGVLEALEACRFEALPEPPLARGYLRRYALLLGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E LL +QAP + P + GA+ Sbjct: 64 DPEPLLALYPRQAPPPPPRKGPRRRPFPLGLFLFLLLLFGL-----------GYGAYLLL 112 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + Q E++ ++P T ++P Sbjct: 113 RPRPVQ----------VVEVAPPPPSKPPERYPLRVVSEPPGARVYLDGFYLGQTPLESP 162 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 V + + P +A V A T PLP + Sbjct: 163 PVEGGKRVLR-LELPGYEPLEAEVLLKA-----PLTLTYRLKPLPQPPPASPPVPVEKGK 216 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 LV+ WL V K+L+ G+ L+ P +++ G P AV++ +G+ D Sbjct: 217 LVLKLEGRSWLRVRQGD-KRLYEGIPEVGAE--LSFDLPVEVRAGNPGAVRVILEGQ--D 271 Query: 315 LSRFIRTNQ 323 L + Sbjct: 272 LGPMGEPGK 280 >UniRef50_B9THJ2 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9THJ2_RICCO Length = 280 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 2/173 (1%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L+ ARE GLS V +L L + ++ IE+D + +RG+IR+YARL++I Sbjct: 108 CGNVLKAAREAQGLSIHEVCSQLRLGLKQIQAIEQDDFDKLPQPSIVRGFIRNYARLLNI 167 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGK--RRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 +L ++ P +A ++S + + ++F+V+ A++ Sbjct: 168 DVNPILEAYQRIVPNKAPLPLSVRSNASRSVIDQPAPGFRPQRLLTFLIFLVLAGIAAYF 227 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + + Q E++ + Q +P+ + PA+ + Sbjct: 228 YINHIKPQALKDAALALDVDEIAETTGQEIPIPVPEAAPAPTDIAPVAPAAQN 280 >UniRef50_A1WE17 Putative uncharacterized protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WE17_VEREI Length = 290 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 101/325 (31%), Gaps = 36/325 (11%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 T + T G LR ARE G+ A+A L + VS + +E D + F+R Sbjct: 2 TEAADGQATAGGLLRQAREASGMHIAALAGILKVPVSKLEALEADDHSVLTDTVFVRALA 61 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 S R + + +L L + P +A A + + Sbjct: 62 ASVCRTLKVDAAPVLALLPQNLPRLSANGAGINA-------------------------- 95 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + + S + + L P PA D Sbjct: 96 --------PVKSSAASATAFPGSASRSVILVVLALLLGALLLFFYPRHPPDAGVTPAPAD 147 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 AT A AP AV P A + +A ++A +A AG Sbjct: 148 APATTGSAADPAAQAPTAASDMAAVPEPPAAGMAGSAA-VHSSAAMAPASATAAQVAAGA 206 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 LV+ + W++V DATG ++++ P + +G + Sbjct: 207 GAGAGSAQLLVLRARSQSWVQVRDATGALALQRTLSAGESVSVAAPTPLSVVVGRADGTE 266 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLN 330 +G P DL R N VAR + Sbjct: 267 ALVRGNPFDLRAVARDN-VARFEVK 290 >UniRef50_A5G5P0 Helix-turn-helix domain protein n=2 Tax=Geobacter RepID=A5G5P0_GEOUR Length = 277 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 108/334 (32%), Gaps = 62/334 (18%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E GA L+ RE GL VA+ + + + IEE + + Sbjct: 1 MLPETNTAIRTGTPVGAYLQEIRESQGLQLDDVAKVTRISKNYLVAIEEGMFEKLPNAAY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLE-KQAPLRAAKVAPMQSFSLGK-RRKKRDGWLMTFTW 118 ++G++R YA ++ + E++ + +AP+ QS + + R+ W+ Sbjct: 61 VKGFLRLYAGVLGLSGNEIIAMYDSARAPVTPPSAERPQSKHVETIKTGGRNRWI----- 115 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 + ++ ++ L E+ P + + A Sbjct: 116 --------------------LPLLLLSLVLMAAFFLQEKDEKRGITPPPSYSKPQVAVLP 155 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 +P V ++A + A+ + A AV+P N +++ + Sbjct: 156 SPLQPVLSSAKISSEKAIESAASAVNPASNELIAGGE----------------------- 192 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 P L + F D L VT + + + + L + Sbjct: 193 ---------PRPKGVFLKLKFNQDSSLNVT-IDDSISQHYELKSGDLIEWKAEKSFTLDL 242 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 G V+ ++ G P L F A + L A+ Sbjct: 243 GNAGGVEAEFNGNP--LKPFGAAGVPAHVVLKAD 274 >UniRef50_B9YKG8 Putative uncharacterized protein n=1 Tax='Nostoc azollae' 0708 RepID=B9YKG8_ANAAZ Length = 256 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 109/332 (32%), Gaps = 76/332 (22%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M Q + A L+ RE+ +S + ++ + +++S ++ +EE + F Sbjct: 1 MTVLNDAQQEQLKEITANLQQVREEKNISLEEISVQTHIRLSFLQALEEWRFEDLPEPVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++G+IR YA + + + E AP++S +K ++ F + Sbjct: 61 IQGFIRRYADRLELDGTAIANNFE-------INFAPLES---NHSIRKPSIYIPLFVPYI 110 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 ++ G ++ Sbjct: 111 FLLIAAAVGLFYLLKIDF------------------------------------------ 128 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 D ++ Q P ++ P Q + SP ++ + + AP + TP + + Sbjct: 129 ---RDKSSAQKQNPMLSVP-------QKTLTSPLKSEILPSPNTAPVSTATPSQTSTSIS 178 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 D A + + D W++V A GK F G+ K N T + ++ G Sbjct: 179 DVA-----------VTLELKGDSWVQVK-ADGKTEFEGILTKGERKNWTAKKSLTVRSGN 226 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 V I + L + QV T N + Sbjct: 227 AGVVLISVNEEEPKL--LGKNGQVKDFTYNKQ 256 >UniRef50_C1D1C0 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1C0_DEIDV Length = 342 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 109/351 (31%), Gaps = 59/351 (16%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR ARE GLS Q +A R ++ +R +E+ TF R Y++ YAR + I Sbjct: 4 GDALRQAREAQGLSTQDLALRTKIRGDYLRALEDGNIALLPERTFARSYLQRYARELKID 63 Query: 76 EEELLPGLEKQAPLRA--AKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 LL ++ P P ++ + RR L+ ++ G+ Sbjct: 64 PAPLLADFDRSVPSTQDLGMTRPSRTAAPVSRRASPLVALLAGLLVLGGAGYGVYRYL-- 121 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT-- 191 Q+ + + VP T P T SV + + Sbjct: 122 -----------APGIQTGSPTEAAQAGSTPVPATDPTPAAPEPVRTVKLSVSSVPSGARV 170 Query: 192 --------QTPAVTAPAPAVDPQQNAVVSPSQANVDTA---------------------- 221 TP + P A + Q V + + + Sbjct: 171 YLDNRDLGLTPLRSFPVEAREDAQLRVEYTGRQPLKQSVSLTQGRNLRARLLPPGQGASE 230 Query: 222 ----ATPAPTAATTP----DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGK 273 A P P P G P + A + + FTA+ W VTDA+G+ Sbjct: 231 LTDLAVPTPKPVVKPGVPASGGGPAENSVTTPSPEAAPGTPVSVQFTAEAWTRVTDASGR 290 Query: 274 KLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 L+ G+ ++ G AV++ +G QV Sbjct: 291 VLYEGIPPAGTRKGFPAG--VTVRTGNAGAVRVSVKGSAF--KALGEAGQV 337 >UniRef50_C6D2C8 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2C8_PAESJ Length = 310 Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 94/309 (30%), Gaps = 59/309 (19%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 GA LR ARE+ GL+ V E ++ + IE + +LR ++++Y V Sbjct: 3 DLGALLRKAREERGLTLDDVQEITKIRKRYLEAIESGDHSVLPGTFYLRAFVKNYCDAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAK-----VAPMQSFSLGKRRKKRDGWL----MTFTWLVLFVV 124 + EE+L + + P V Q + R +R L M +++L+L Sbjct: 63 LDSEEVLRLYQHEIPASVTDQIVEAVPARQPKRVRTRSSERISKLGFNIMMWSFLILI-- 120 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 N + + ++ + TD A Sbjct: 121 -----------------------VVVVWVYFVNQKADKPNEIDNTNITDQA--------- 148 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 +PAP ++ S + T + TT ++ + Sbjct: 149 -------------SPAPPSQSPNSSNGSGTTTPTATPTPTPSQSPTTLTFSSKVGKVDHY 195 Query: 245 VTTPVADPNALVMNFT-ADCWLEVT--DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 P + + + + W EV ++GK + S P + +G Sbjct: 196 DVAPAGVVHKVEIKISGGPSWTEVRSGSSSGKAIISETAPDGSAFTYDLDQPLYINVGRA 255 Query: 302 AAVQIQYQG 310 I G Sbjct: 256 DLSSITVDG 264 >UniRef50_B1WY62 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WY62_CYAA5 Length = 369 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 115/351 (32%), Gaps = 40/351 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ ++ + L+ R + G S + +A +++ ++ +E + Sbjct: 1 MSKYSSIQAEQIRKIATYLKEQRVKQGFSIEQIASMTFIRLPMLKALESANIEQLPELIY 60 Query: 61 LRGYIRSYARLVHIP------------------------------------EEELLPGLE 84 ++G+IR Y + I L+ Sbjct: 61 VQGFIRRYGEALGIDGHSLSHQINASQVEKPTISPNLVSAPTQESSVGQEVPATLVNEDN 120 Query: 85 KQAPLRAAKVAPMQSFSLGKRRKKRDGWL--MTFTWLVLFVVIG-LSGAWWWQDRKAQQE 141 K++ +K + S WL + W+ L V+ G ++G ++ R E Sbjct: 121 KKSVAVKSKPRTLVHPSEETAEPSEVSWLRQLKLYWIYLLVLGGAIAGLFYLFSRPPATE 180 Query: 142 EITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAP 201 + D + S+ E + +S T P TS + +T T +T P Sbjct: 181 QTAQTQDTETVTRSTKPETTVPLTQPSSPITKPEVTSQQTQTEETAQTTENANTLTQPET 240 Query: 202 AVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTA 261 + ++ + + S A T + AT +P + T + Sbjct: 241 IISSEEPSPILESPQATLEATTSNTSEATGNSTISPETANNTISETATEKAITAALQLEG 300 Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 D WL+V G+ + G+ ++ N Q ++ G AV++ KP Sbjct: 301 DSWLQVR-VDGEVEYEGILKEGEQQNWDAQETLTIRAGNAGAVKLSVNNKP 350 >UniRef50_A1VNF3 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VNF3_POLNA Length = 309 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 103/320 (32%), Gaps = 34/320 (10%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + T GA LR AR+ GL +A L + + ++ +E+D+ F R S R Sbjct: 24 QQDTAGALLREARQSQGLDIATLAALLKVPLHKLQALEQDRLDLLPDPVFARALASSMCR 83 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 ++ + +L L + + Q+ + + R G + Sbjct: 84 ILKLDPAPVLHRLPAISAFKVTS----QNRGINAPFRARSGRH--------------AAP 125 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W + + + + S Q + + P V+ + Sbjct: 126 LWAHISRPAVLVGLALLLGALVLIFLPSIQQEI----ARHRQGGQDAANPTQLVEPASVT 181 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 T + S D A PT + GA + D A Sbjct: 182 TTVTTPVSAGNEASGMTPNPSLGSMVPADVAVPAIPTNTLSSAGAVDVNPDAA------- 234 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 + + ++VTDA G + R + +++G P + + +Q+Q +G Sbjct: 235 ----ITFSAKGASRIKVTDAKGVVVMDRAFRAGESASVSGAPPLTVVVSRANLMQVQVRG 290 Query: 311 KPVDLSRFIRTNQVARLTLN 330 + DL+ + N VAR + Sbjct: 291 QDFDLTSVTK-NNVARFEVK 309 >UniRef50_D0XYY9 Transcriptional regulator, XRE family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XYY9_9CAUL Length = 362 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 103/317 (32%), Gaps = 17/317 (5%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 Q+E GA L+ ARE GLS Q VAE ++ V +EE + A + F GY+R+Y Sbjct: 35 QHEPADIGAALKAAREARGLSLQQVAEATRIRQGYVEALEEMRLEALPSRPFTIGYVRAY 94 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 A L+ + + + + AP A++ R++RD L + VV G Sbjct: 95 AALLGMDGDTAVARFKTDAPDEGAELREPVGV-----RRERDPRLALILAGGVLVV-GAI 148 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 W +A + + + V + + ++ P TT Sbjct: 149 LLW--------NVAQRAIAKDQPPQQIAPAAASTQVQAHANNSSVALGAPLPAPVESTTP 200 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 +TP + A A + A A AP + Sbjct: 201 EPYKTPGLDDAAANGGSVDAAKAAAKARAEADARAGIVDPAHQVQVGAPFKPRGVMLGAA 260 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 + + +V+ L V G+ F+ + P ++ Y Sbjct: 261 QGEGSGVVLQARKPATLVVRGVDGQVYFARALTAGDAYRAPRTPGLIADVSDPMVFEVYY 320 Query: 309 QGKPVDLSRFIRTNQVA 325 G L + +N A Sbjct: 321 GGA---LVSHLPSNSTA 334 >UniRef50_B0SW88 Putative uncharacterized protein n=2 Tax=Caulobacter RepID=B0SW88_CAUSK Length = 357 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 108/302 (35%), Gaps = 9/302 (2%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 ++ + G+ LR ARE GL+ + VA+ ++ S + +E+ + + F GY++SYA Sbjct: 35 DDGVDIGSALRAAREFRGLNLRDVADATRIRQSYIEALEDLRLEELPSRPFTIGYVKSYA 94 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 L+ + + + + P + + + R +RD L L L V+I + Sbjct: 95 NLLGLDGDAAVARFKLDVPDDSEPLR-----APVGVRHERDPRLGLI--LALGVLIVAAI 147 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD-TTA 188 W ++A ++ + ++ S + + + PA V+ TT Sbjct: 148 VLWNVAQRAIAKDAPPTQVAQAQATAAVSAPAAVPVDPNAVPGSVSLGAPLPAPVESTTP 207 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 +TP + A + V+ AA + + A Sbjct: 208 EPYKTPGLDDAAANGGSADAVTAASKARAVEAAAAAPADPSLQVGLGSAFRAKGAVYGAA 267 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 AD + L++ L V DA G F+ ++ PAA + Y Sbjct: 268 PADASGLILQARKPASLTVHDAGGAIYFTRWMAAGEAFRAPRNGGLIAEVSDPAAFDV-Y 326 Query: 309 QG 310 G Sbjct: 327 NG 328 >UniRef50_Q39S75 Transcriptional regulator, putative n=2 Tax=Geobacter RepID=Q39S75_GEOMG Length = 280 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 102/335 (30%), Gaps = 56/335 (16%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 ++A + G LR RE G S++ A + + + +EE+ + +++ Sbjct: 2 SDALTPGKGGTSIGILLRETRESRGESREDAARVTRIGKNYLAALEEESFDKLPSPAYVK 61 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G++R Y + + + ++L+ E+Q A Sbjct: 62 GFLRVYGKHLGLSPDDLVARYEEQLVPAPATEQE-------------------------- 95 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + E + + N V L T PA Sbjct: 96 ----------------EDEGGAPPVARVAIPPIRNRWMIPLVLLALVLVTATIIPQREPA 139 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 V + AP P P + +P + A A A+ + P Sbjct: 140 PVRPVPEPVPARVLLAPPPVQSPLSSVAAAPLSKLQEAPAESAEAASPEAAAPSTKP--- 196 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 L + DCWL++T G + + G+ + L +G Sbjct: 197 --------GGMVLKLKVNQDCWLDIT-IDGAVSQQYDLKAGDLIEWKGERVFSLDLGNAG 247 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 V+ ++ GK L F + A +TL AE + Q Sbjct: 248 GVEAEFNGKV--LPSFGEAGKTAHVTLPAEYTAEQ 280 >UniRef50_C9LVZ7 Transcriptional regulator, XRE family n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVZ7_9FIRM Length = 261 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 101/320 (31%), Gaps = 62/320 (19%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR RE+ LS + + + ++ + IE+ + + +G++R+YA + + Sbjct: 2 IGDLLRRERERQNLSIKDIEKATSIRALYIDAIEKGEYKTLPGEVYAKGFVRNYANYLKL 61 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E++ ++ + S S + R+++ Sbjct: 62 NANEIVNAFNEEMHPQEELQDAAGSSSAEEARQEQS-----------------------A 98 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 +R ++ + S + +S ++ + + A + D + Sbjct: 99 ERNREEYRGPKITSLESYPMEKSSHGVRNALMVAAAVFVVAFAALIAFGGDEEPSA---- 154 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 P A + Q T A P P A D Sbjct: 155 ----------PAPRAKMQTQQGQKQTEAAPKPAA----------------------DSVE 182 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + ++FT CW EV GK F G K L L G+ + G A+ GK D Sbjct: 183 VKLSFTDRCWTEVV-VDGKTEFEGTAEKGKVLTLKGKDKVHITAGNAGALNYSLNGK--D 239 Query: 315 LSRFIRTNQVARLTLNAEQS 334 + + +V T E + Sbjct: 240 MGAIGQKGEVVEKTFTKENA 259 >UniRef50_D2LSB0 Transcriptional regulator, XRE family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSB0_BACS4 Length = 297 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 89/310 (28%), Gaps = 42/310 (13%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RL+ ARE+ G S + + ++ + IEE + R +++SYA V I Sbjct: 4 LGVRLKAAREEKGYSLEELQSITKIQKRYLSAIEEGDFSRLPGDFYARAFVKSYADAVGI 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQS----FSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 P E L + P + + + +KK T + + ++ ++G Sbjct: 64 PSEMLFEEHRDELPQPKREKTDLPARVNRSKPKMVKKKSKVMSFMPTLIAVLFILAIAGV 123 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 +W LN ++ TD T V Sbjct: 124 FW--------------------------------ILNQNSDTDEQQTGASREDVQANPEF 151 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 T + V + Sbjct: 152 DITDELEEGLEESGEDSEPEVEVEPEPEPEPEPEPEPEPEQVLELDRTEGTNSYFILSNT 211 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKD--GNLNLTGQAPYKLKIGAPAAVQIQY 308 + + + F+ D W+++ D+ + S + + + ++ +G ++I Sbjct: 212 EEFDVRLEFSGDSWIQINDSNNSAIISQTFGDGDIESFDFSDESNINFHLGRTITLEIYI 271 Query: 309 QGK----PVD 314 + P+D Sbjct: 272 NDELLEYPID 281 >UniRef50_A5VIW4 Uncharacterized protein n=11 Tax=Lactobacillus RepID=A5VIW4_LACRD Length = 345 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 103/342 (30%), Gaps = 65/342 (19%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + L G LR ARE+ G + + + ++ + IE++ + Sbjct: 1 MSENENDQKR--LEIGKILRKAREEKGYTLDDLQQMTKIQKRYLIAIEDENFDELPGDFY 58 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF---- 116 +R +I+ YA V + ELL + Q P + + R + + Sbjct: 59 VRAFIKQYANTVGLDGNELLQKYDDQLPQTKTEEYSDHLAQAVETRANQRKTVSGSVDKV 118 Query: 117 -----TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 T ++ V++ + A W + +T D SS +S S + + ++T Sbjct: 119 RNYMPTIIIACVIVLVLAAIWITAIARNHRDSSTRIDNSSVSVSGESRKKAATSAKKAST 178 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 +T+ + + SQ DT Sbjct: 179 KQSKSTAIKLQEAPNR-----------------NDTSVTYTASQLTKDTT---------- 211 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL--- 288 L + + W++V A L + + ++ Sbjct: 212 -----------------------LQIEPSDRSWMQVR-ANNNDLLNKTLNNNEKTSVKIS 247 Query: 289 TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +G A +++ + + + R +T+N Sbjct: 248 RDTTSLVITVGNARATKLKLGNQEIYFTNNGRYQNTRNVTIN 289 >UniRef50_A8TN86 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN86_9PROT Length = 442 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 100/260 (38%), Gaps = 27/260 (10%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 ++ + G LR ARE GL VA L ++ + + +EE + A T+ GY+R+YA Sbjct: 3 SQPIPVGDELRRAREAAGLEISDVAAHLRIRSNFLAALEEGRPDALPGVTYAIGYVRTYA 62 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWL--MTFTWLVLFVVIGL 127 + + E + +++A ++ L +G + M + L + G Sbjct: 63 GFLGLDPETSVRRFKEEAAGLNSRTE------LVFPSPAPEGRVPGMAVMLVALLLAGGA 116 Query: 128 SGAWWWQ-DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV-- 184 G W+W +R ++ + + A+L + S+P + S T A S P S Sbjct: 117 YGGWYWVSERDGGLHDLVPLVPERLAQLIEG--EAPSLPTSASKPTSGAIGSATPRSTAG 174 Query: 185 ---DTTATNTQTPAV-----------TAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT 230 D T PA +AP P+ PQ + + S TPAP+AA Sbjct: 175 TYADANPTGVALPATGSTDTKLSASPSAPQPSGVPQASTLASAPVITKPAEPTPAPSAAL 234 Query: 231 TPDGAAPLPTDQAGVTTPVA 250 PL VA Sbjct: 235 RDSAPTPLAVPTPTPAPVVA 254 Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 73/211 (34%), Gaps = 24/211 (11%) Query: 138 AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT---QTP 194 A IT A+ + A ++ + + + T P PPASV T T P Sbjct: 215 ASAPVITKPAEPTPAPSAALRDSAPTPLAVPTPTPAPVVAMEPPASVAATDATTQATSEP 274 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP------ 248 T A P A+ P+ A A T A T P A +P + P Sbjct: 275 VPTGAASDDTPDVTALPEPTSAARQVAGTTPLEAPTPPQARAFVPVEPDVPAAPRIAGLI 334 Query: 249 -------------VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + +++ T D W++V D+ G LF+ + R+ + +A K Sbjct: 335 GASEAAVPTDRTTAGPIDRIMIRATGDSWVQVRDSEGTALFTRVLREGDIYRVPSKAGLK 394 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR 326 L G A+ I G V R V R Sbjct: 395 LATGNAGALDILVDG--VSAPRLGGFGDVVR 423 >UniRef50_Q01SZ1 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SZ1_SOLUE Length = 317 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 96/324 (29%), Gaps = 32/324 (9%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR R + L + ++ L + + IE D+ F + ++R YARL+ + Sbjct: 4 VGETLRRERVKRNLDFEQISRELKISTRFLEAIENDQYEKLPGGVFAKSFVRQYARLLGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 EEEL L + P++ ++R + Q Sbjct: 64 DEEELATQL------QGVIAPPLEPLLSPEKRPASVAPI--------------------Q 97 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 K ++ + S + V L S A+ A P Sbjct: 98 VPKVEEWQTVGDRGFRWTGSLSAAAMVVVVMLVCSAVYAWLQRPKATAATQAAAPVHTAP 157 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 + A P P ++ A+T P A T PN Sbjct: 158 SPVAAQPVPPPPAPPAAQTTEPTQAAASTAVPVPAGEQKPVEAAAVAAKPAETKPLAPNP 217 Query: 255 -----LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 + + W+ A GK FSG ++ G L++G V I Sbjct: 218 DATVHVQIVADEPVWISAR-ADGKYTFSGTLNPGDTKSVEGVKDVVLRLGNAGGVSISLN 276 Query: 310 GKPVDLSRFIRTNQVARLTLNAEQ 333 GKPV + +LT Q Sbjct: 277 GKPVGSVGPKGQTRTVQLTSGGFQ 300 >UniRef50_B6IUT5 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IUT5_RHOCS Length = 413 Score = 111 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR R +LG ++E L ++++ + IE+ + ++ G++RSYA + + Sbjct: 37 VGELLRQRRLELGYDLPQLSEMLRIRLNYLEAIEQGRWADLPGQAYVTGFLRSYATAMEL 96 Query: 75 PEEELLPGLEKQAPLRAAKVA---PMQSFSLGKRRKKR------------DGWLMT---- 115 +L ++ P + GW M Sbjct: 97 EPGPVLRRYKEDTAGAPPPAELYFPEPANESRVPGGALILIALLAGLVVYGGWYMLSASD 156 Query: 116 --FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS-TTT 172 + +V + L+G + + + E Q + + S + Sbjct: 157 RSLSDMVPALPDRLAGLIYGDSAPEESPAPAAVLPPGQVEALVGQSQPTAPEVGASVDQS 216 Query: 173 DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 PA + + + + PA AP+ P Q +P++ + + P Sbjct: 217 APAQPPSAQSPSGQSPSVQPAPAGPQTAPSSVPGQTTAAAPAEPQGEAEESEVPQLPDLG 276 Query: 233 DGAAPLPTDQAGVTTPVA------------------------------DPNALVMNFTAD 262 A P + +V+ T D Sbjct: 277 SPAVPPSAAEEPEAPAEVAEAQQEPAASAAPSPPPAAPPPGRVFGQTDGTVRVVVRATED 336 Query: 263 CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTN 322 W++V D G S + R + + G + + G+ DL Sbjct: 337 SWIQVRDGKGTLWASRVLRPGDSFRAPDVPGLVMNTGNAGGLVVSLDGQ--DLPPLGGRA 394 Query: 323 QVAR 326 QV R Sbjct: 395 QVMR 398 >UniRef50_A9AVS8 Transcriptional regulator, XRE family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVS8_HERA2 Length = 319 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 91/298 (30%), Gaps = 58/298 (19%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G R R ARE G+S + + + +E + + RG+IR+YA+ +++ Sbjct: 62 LGLRFREAREARGISLAQASSETRIIQRYLAALENGEYHHLPGDVYARGFIRNYAQYLNL 121 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 P +EL+ + P++ ++ I L W Sbjct: 122 PADELIDLYR----IERGASTPIRIVPAAVPPRRNT--------------IFLPSLWTVI 163 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 I + + + NS T P +TP A Sbjct: 164 LVVLALVVIGYLTLNALGLTTINSTSVSGGATTTLAIATPTLLATPTAQ----------- 212 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 T P +V N + +P+ T P Sbjct: 213 -PTNPDGSVPSPINPLATPTVTITPTQDVPVQVV-------------------------- 245 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 L ++ WL+V G+ G+Q + Q ++K G A V++ + GKP Sbjct: 246 LRID-GGSSWLQVL-VDGQNTIEGIQNNGWTQTFSAQQTIQVKAGNAAVVEVIHNGKP 301 >UniRef50_A7C763 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C763_9GAMM Length = 139 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 3/102 (2%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 D L+ G L AREQ +S + +A+RL L V + +E D + F+RGY+R Sbjct: 24 DDDLADLSPGMILHQAREQQKMSVKHIADRLYLDVHVIEALEADDYETLPPTIFVRGYLR 83 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK 108 +YA+L+ +P + ++ +K L+ + P+ L + K+ Sbjct: 84 NYAKLLEVPIKSIMVSFDK---LQQPREVPVLHHHLNLKNKQ 122 >UniRef50_C9YB08 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YB08_9BURK Length = 295 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 104/322 (32%), Gaps = 44/322 (13%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 +T G LRNARE GL A+A + + V + +E D+A + F+R S R Sbjct: 16 APVTAGRLLRNAREAAGLHIAALAVSMKVPVKKLEALEADRADLLPDAVFVRALASSVCR 75 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + +L L + SF G Sbjct: 76 ALKVDSAPILELLPQTVK---------PSFEAG--------------------------- 99 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 K + +S ++ + ++ P + A+ Sbjct: 100 -----DKGINAPFKVPGEAASVGFVDVLKRPVVIVVSLLLLAVLGIAFAPEMHLPDFASK 154 Query: 191 TQ-TPAVTAPAPAVDPQQNAVVSPSQANV-DTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 TPA AP + V + + P P+ A A Sbjct: 155 ADVTPANIAPLKESAIEPVPVAEKLEEKLPPVEVVPGPSPAELVKQPVTEAALPASSAPV 214 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 +V+ W+EV D+TG L + DG + TG +P + +G V ++ Sbjct: 215 QKPTEMIVIRAKGTTWVEVVDSTGAVLVRRTLQADGITSATGVSPLAVVVGKADMVDVEV 274 Query: 309 QGKPVDLSRFIRTNQVARLTLN 330 +GKP ++S R N VAR + Sbjct: 275 RGKPFNMSTVSRDN-VARFEVK 295 >UniRef50_Q2Y6F4 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6F4_NITMU Length = 448 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 87/256 (33%), Gaps = 4/256 (1%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + + G LR AR + GL + VA +L V +EED+ FLR Sbjct: 10 EQHEEPKKTGEQVGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYDKLAGGPFLR 69 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G++R+YA+L+ + E LL LE+ P V S + + + Sbjct: 70 GFVRNYAKLLQLDEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKRNVVLGGGIV 129 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQ----GQSVPLNTSTTTDPATTS 178 + I L G + KA MA +S + + Q+ P + PA ++ Sbjct: 130 LAITLLGYAIYSGDKASVANQPDMAMESEKDTGQPTLSFPFPSQAPPAEVPESQAPAPSA 189 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 P TAP+ +Q+ V S + + A AP Sbjct: 190 LVPDMASQREPGIAALEETAPSADTGREQDTVASAPKDAAAGSGAEASAGEPLTLPLAPP 249 Query: 239 PTDQAGVTTPVADPNA 254 P Q T P Sbjct: 250 PAVQTAPTAPAVPGGE 265 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 67/196 (34%), Gaps = 4/196 (2%) Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 Q + + V + + P T+ ++V Sbjct: 253 QTAPTAPAVPGGEPANVPVAPKPPQVTVAPKPSEGPVTSKPSGSAVTPKPPQVAVAPKPL 312 Query: 199 PAPAVDPQQNAVVSPSQANVDTAATPAPTAATT---PDGAAPLPTDQAGVTTPVADPNAL 255 P + V+ V A P+ AAT+ P P A P + Sbjct: 313 EGPVTSQPSESAVTSKPPQVAVAPKPSEGAATSKPSESAVTPKPPQVAATPKPPPAKAGI 372 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 + F + W++V D GK L S + L G+ PY L IG P V++ Y KPVDL Sbjct: 373 RLTFAGESWVQVKDGNGKLLLSRVNPPGSEQVLRGKPPYSLMIGNPGQVKLVYNSKPVDL 432 Query: 316 SRFIR-TNQVARLTLN 330 S F + +A L L Sbjct: 433 SIFAKLPGGMAHLVLQ 448 >UniRef50_A9D324 Putative uncharacterized protein n=1 Tax=Shewanella benthica KT99 RepID=A9D324_9GAMM Length = 225 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 12/236 (5%) Query: 97 MQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSS 156 MQSFS R+ RDG L T+L+ F+++ L Q+ + + D S Sbjct: 1 MQSFSRKTTRQARDGRLTLVTYLIAFILLALLV-----LWWVQKSDTLSSIDFSQPTAEE 55 Query: 157 NSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQA 216 + +S + + ++ +T + + A ++ +++ S Sbjct: 56 IAASLNEPGSISSDYDAASNFDSGSSNANTGIESLTHDVASLAASGLESKESKSALVSAP 115 Query: 217 NVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF 276 N ++ ++ T A P+ Q+ + L ++ +ADCW++VTDA G L Sbjct: 116 NDESGSSMNETETKINTQALAKPSIQS------IGQSTLALSLSADCWIKVTDAAGNILI 169 Query: 277 SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 + +++ LN+ G+AP+KL +GAP AV I+ G+ V L + + +VARLTL + Sbjct: 170 NDLKKAGSQLNVAGEAPFKLTLGAPQAVSIELNGEAVSLRDY-PSGRVARLTLPSV 224 >UniRef50_Q6MGU1 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGU1_BDEBA Length = 374 Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 123/369 (33%), Gaps = 64/369 (17%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 TG L+ ARE+ GLS + L + ++ IEE A TFLRG+++SYA +H+ Sbjct: 4 TGELLKKAREEKGLSLHEIGLSLKISSKVLKAIEEGDETQLPAKTFLRGFVQSYANFLHL 63 Query: 75 PEEELLPGLEKQAPLRAA------------------------------------------ 92 +++L ++ Sbjct: 64 NSDQVLEVFYEEMGSTKPKPYIRQTEEPKAAGTTTESETKPAGAATEGTAEAAAPAPEAT 123 Query: 93 -----KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMA 147 K P S + G + K + T+ L L V++ + + +E + Sbjct: 124 VTPIRKTPPPTSSNHGMQSLKENKNTKTYIILGLGVILVGLILFTKKMIDKYSKEAEVPS 183 Query: 148 DQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQ 207 + + + + ++ T T+ +TP + T T V++ A Sbjct: 184 AEVAQTMEGATPVVVDTTIDGGTLTEVDPNATPGPLGNLTTAPTPAATVSSTATPAASPT 243 Query: 208 NAVVSPSQANVD-----------TAATPAPTAATTPDGAA-PLPTDQAGVTTPVADPNAL 255 +AV +P A +PAPTA +P A P PT P L Sbjct: 244 SAVSTPVTAATPAASPTATPKPTATPSPAPTATPSPTPVASPSPTPTPTPKPESGKPVEL 303 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV-- 313 ++ +E + GK + + ++ K+ AV + GK V Sbjct: 304 IVEALDSVEIEYSAPNGKPQKIRLS-AEQVHTFKSKSGLKINFSNGGAVNLILNGKEVGI 362 Query: 314 --DLSRFIR 320 DL + IR Sbjct: 363 PGDLGKPIR 371 >UniRef50_Q04R20 Transcriptional regulator n=7 Tax=Leptospira RepID=Q04R20_LEPBJ Length = 372 Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 111/337 (32%), Gaps = 43/337 (12%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR ARE+ LS + VA+ + V + +E + TF G++++Y + + Sbjct: 6 VGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYGSYLKL 65 Query: 75 PEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 +L+ + A + + + K FT + V+I L A+ Sbjct: 66 DTGQLINLYRGEKIEESQAPLEELTRPTASYYTKINMDKNKIFT--IASVLIILISAYLI 123 Query: 134 QDRKAQQEEITTMADQSSAELSSNSE---QGQSVPLNTSTTTDPATTSTPPASVDTTA-- 188 D ++S +L + +S+P N S + SV Sbjct: 124 IDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPENRSESFILTPDKGVSFSVSNQQCK 183 Query: 189 --------------------------------TNTQTPAVTAPAPAVDPQQNAVVSPSQA 216 + Q ++ P + + V +QA Sbjct: 184 LFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRIIAQA 243 Query: 217 NVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLE-VTDATGKKL 275 + +A T + T P + + F + E + D G+ Sbjct: 244 VTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFIID--GQMG 301 Query: 276 FSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 F G+ + + +L + +LK+G +AV++ GKP Sbjct: 302 FRGLVQANETKSLEAKDRLELKVGDGSAVEMIQNGKP 338 >UniRef50_A5FX96 Uncharacterized protein-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FX96_ACICJ Length = 436 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 89/243 (36%), Gaps = 8/243 (3%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + GA LR RE+LG +A RL ++ + IE A A T+ G+IRSYA + Sbjct: 27 SVGAELRAVRERLGWKLPDIAARLKIRRVFLEAIEAGNLAALPAPTYAAGFIRSYAEAMG 86 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + EE+L + R + L + D + L + VIG++G + W Sbjct: 87 LDPEEILRRFRAEGMTRPRQP------DLAFPQPVPDRAVPPGAVLFVVAVIGIAGYFLW 140 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS--TPPASVDTTATNT 191 + ++ M A+L+ + + S P + T Sbjct: 141 YRHSEHELKMARMVPAVPAKLAPLAVPKSPPAPKAAAAPAAPPASSGATPDQLAANGTAA 200 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + + P+ + + S A+ +A+ + A+ +A + A T Sbjct: 201 PAASASGPSTSGPSTSSQTASDQTASGQSASGETTSGASASGTSAAGQSAPAAATPDQTA 260 Query: 252 PNA 254 +A Sbjct: 261 SSA 263 Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 1/176 (0%) Query: 137 KAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAV 196 ++ E T+ A S + S + P T+++ + A S + + + Sbjct: 228 QSASGETTSGASASGTSAAGQSAPAAATPDQTASSAN-APASQAAGGAASGTASGGSGGS 286 Query: 197 TAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALV 256 T + +A S ++ ATP A+ A T +A N LV Sbjct: 287 TTAMSSSASASSATSSSGASSASGGATPGSAIPAPATSASGTGAGTATAATAIAGANPLV 346 Query: 257 MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 ++ +AD W++V G LFS + + + + + L G ++ G Sbjct: 347 ISASADSWVQVRGPHGTILFSRVLKAGQSWPVPNEPGLTLTTGNAGGTELVRNGAA 402 >UniRef50_A6FNN0 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=17 Tax=Rhodobacterales RepID=A6FNN0_9RHOB Length = 408 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 108/352 (30%), Gaps = 36/352 (10%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +R R LG S V L +K + V IE A F+ GY+RSYAR + + Sbjct: 27 LGDLMRGERATLGKSLLDVERELRIKAAYVAAIENADPDAFDTPGFIPGYVRSYARYLGM 86 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK-------------------------- 108 + K++ A ++ S+ K++ Sbjct: 87 DPDRAFDAFCKESKFSIAHGMSAEASSIRKQKSSFKTAAPNRKSDPLMSPGTPFAPASEG 146 Query: 109 -----RDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQS 163 G + + LV + G W + + + E + Sbjct: 147 ILARVEPGAIGSVMVLVALISAIGYGGWAVLNEVQRVQFAPVENTPDVLADLDPLEGAIT 206 Query: 164 VPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT 223 + + P D+ + A+ P + + P+Q Sbjct: 207 PAPDGDSDPVRTAGGFLPPESDSIDRLYRPEALDVPVMVARDAPISTLDPAQVGTLRPEL 266 Query: 224 PAPTAATTPDGAAPLPTDQAGVTTPVADP-NALVMNFTADCWLEVTDATGKKLFSGMQRK 282 P +++ A P+ G V DP + + W+ V G +F G+ Sbjct: 267 PQTDRSSSFAVAGNQPSAVPGTPQVVEDPLPGVRVVAVRPAWVRVRAGDGSVIFEGVMNA 326 Query: 283 DGNLNL-TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR-LTLNAE 332 ++ T + P +++G AV G+ + V L L+AE Sbjct: 327 GDTYDVPTTEEPPTIRVGESGAVYFTVNGQHY--GPAGASGSVTSGLALDAE 376 >UniRef50_UPI0001692BFA hypothetical protein Plarl_10797 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692BFA Length = 335 Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 109/330 (33%), Gaps = 58/330 (17%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LRNAR + LS + + E ++V + IEE S ++R +I+SYA + + Sbjct: 4 LGQFLRNARLEKKLSLEELQEMTKIRVRYLEAIEEGDYKVLPGSFYVRAFIKSYAEAMGL 63 Query: 75 PEEELLPGLEK------QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 E+L +K + + P G R + + +V FV + + Sbjct: 64 DPNEVLDMYQKVNPVPEEPEHAPEPLRPRSRSGGGPRSSDQTSKWASTVMVVCFVALIVG 123 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 +++ + +S +T T P + Sbjct: 124 IVYFFAYQ------------------------------GSSGSTGGNTPEASPNRLTEKQ 153 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 + + +P+ + A A +A++ T T G L Sbjct: 154 SESPSPSSSPEASATPQPTPTPTPTPEASLKQTETTKSLDTYTVSGTNKLE--------- 204 Query: 249 VADPNALVMNFTADCWLEVT---DATG---KKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 + + W ++ D G K + + + + + T + + +G Sbjct: 205 ------IELKAKDKVWYQIDQLLDTKGTKKKLIKTETLGQGLSASYTVEGGVFINVGKQN 258 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 ++++ G+ +DL +V + L ++ Sbjct: 259 SIEVTVNGQKIDLGNASNPKKV-KFLLESD 287 >UniRef50_C0X144 Transcription regulation protein n=22 Tax=Enterococcus faecalis RepID=C0X144_ENTFA Length = 288 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 100/264 (37%), Gaps = 13/264 (4%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 ++ G L+ AR Q +S + + ++ + IE++ + + ++R +IR YA Sbjct: 2 ASVNIGETLKEARLQKNISIDELQQMTKIQKRYLEIIEQNDFESLPGTFYVRAFIRQYAS 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD-----GWLMTFTWLVLFVVI 125 V + +L+ + + P + P+ G R++ D WL+ + F +I Sbjct: 62 AVGLDGNQLVDIYDGKEPAIVEEPKPVYEELEGSRKQLHDEEKQSSWLLRNLPAIAFSLI 121 Query: 126 GL--SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 GL + + + Q+ E +SA + E Q+ +T ++T P+++S P Sbjct: 122 GLAIAVVVLYIMWQDQKAEPIIQTPATSASVEKPKESSQAPESSTQSSTPPSSSSEPEKK 181 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQAN------VDTAATPAPTAATTPDGAAP 237 + VTA + N ++ + VD T T Sbjct: 182 TAVAVVSDANNQVTATVKDANSPINITFKGTEGSCWIGVMVDGNYTYQHTLQAGETQTTA 241 Query: 238 LPTDQAGVTTPVADPNALVMNFTA 261 LP + A T + N + + Sbjct: 242 LPANAANATLILGASNNVAIQVDG 265 >UniRef50_A1B324 Putative uncharacterized protein n=3 Tax=Rhodobacterales RepID=A1B324_PARDP Length = 406 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 111/354 (31%), Gaps = 35/354 (9%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 + + G +R R LG S V L ++ S V IE A +F+ GY+RSY Sbjct: 24 DDPDIRLGDLMRGERATLGKSLLDVQRELRIRASYVAAIENCDISAFDTPSFIAGYVRSY 83 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF------------ 116 AR + + + +++ + + +R+ D Sbjct: 84 ARYLGMDADWTFRRFCQESGFQPTHGMAPSAAGPKPQRRPSDPAEALANPHPIFLPRQES 143 Query: 117 -----------TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSS---AELSSNSEQGQ 162 + LV+ V+ G W + Q+ T DQ+ A L E + Sbjct: 144 VWNSIEPRAIGSLLVMVVLACGLGYGGWTVLQEVQKVNLTPGDQAPGVIAALDPVQEAAE 203 Query: 163 SVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAA 222 + ++ P A P A+DP NA P+ Sbjct: 204 PETVESAQVNLPRPEGLDRTYRPQALEVPVLMARDGPIAAIDPGLNA---PAMQPEGAEP 260 Query: 223 TPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRK 282 A +P +QA V T D + + W+ VT A G L Sbjct: 261 VARIAAVQDRVHGPQMPAEQAAVRTVAPDAPEVEILAARPAWVRVTSADGTVLLEKTMDA 320 Query: 283 DGNLNLTG-QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSP 335 L +AP L+ G A+ G+ + A++ N E SP Sbjct: 321 GERFALPKLEAPPVLRAGNSGAIYFAVNGRT-----YGPAAPGAKVVKNVELSP 369 >UniRef50_Q9PG41 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa RepID=Q9PG41_XYLFA Length = 211 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 12/195 (6%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 A G RLR+AR +GL+ + VA L + + VR +EE+ A F+RG +R YA Sbjct: 20 EHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEENWQRLGAPVFVRGQLRGYA 79 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI--GL 127 R ++I + LL + ++ P + S ++ R L + T ++VVI L Sbjct: 80 RFLNIDLDPLLEQ------AFSTEIEPAELVSYAHMQRGR-RLLESVTRKAMYVVITGVL 132 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQ---GQSVPLNTSTTTDPATTSTPPASV 184 + W+ R + + + A S SE +S +T P S P Sbjct: 133 AVPVWYAMRSSFEPRVPRTASLEVVPEQSKSEALGGTSPDSGGSSDSTAPFIASIAPVPR 192 Query: 185 DTTATNTQTPAVTAP 199 + + Q V A Sbjct: 193 NNAMPSEQGGGVNAE 207 >UniRef50_B8G090 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8G090_DESHD Length = 267 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 91/310 (29%), Gaps = 66/310 (21%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LRNAR G S E +++ + +EE+ T+ +G++R+YA+ + I Sbjct: 5 GQILRNARVDKGWSLTQAEEVTKIRIRYLEALEEEAYHILPGDTYTKGFLRTYAKHLGIN 64 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 EE+L + + P+ + ++R W+ Sbjct: 65 PEEVLEHYKALG---QQQEKPLSAEPAPPLPRRRPQWIKPV------------------- 102 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 + + S+ + TT P TP Sbjct: 103 ----------LVAVTGVVALVVVIGIASLSKHPGTTIAPEDIVTP--------------- 137 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 PQ+ V P PA T+ + P + Sbjct: 138 -----LPTTPQEEVVQQPENTPPPDDTPPAQTSPSNPQNVIAQENEGLVAQ--------- 183 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK-LKIGAPAAVQIQYQGKPVD 314 + F+ CW+ V + G+ F G + L + + + +G + + GK Sbjct: 184 -LVFSQPCWIRV-NVDGQFAFEGTFTQGATKELKAKDQIELVTVGNAGGLTVTLNGKT-- 239 Query: 315 LSRFIRTNQV 324 QV Sbjct: 240 WPSLGAQGQV 249 >UniRef50_C8WWM2 Transcriptional regulator, XRE family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWM2_ALIAD Length = 312 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 9/304 (2%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR RE LGL+ + + ER ++ + +E + + RG++RSYA ++ + Sbjct: 5 LGQILRARRESLGLTVEDIEERTKIRKRYIEALESGQWDVLPGRVYARGFVRSYAEVLGL 64 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 ELL +A+ + + + + + Sbjct: 65 DGSELLEKYVDGGDAGSAEPGVRAESPALTSENRAADRKPAARMVEPRSLNEMERT---R 121 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 R ++ E + S S GQ + + + T T Sbjct: 122 SRAHERHERSRRETYDRPVRSVGSWVGQGLLIVGALVVVGGLYVLLHHHHGQATHRTNTT 181 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 + Q + A P A T A Sbjct: 182 TSSPQKT----QATKPATHQTAPPKRTTQPIQKAQTVVVALPYANGMYTYKVLHAASLQV 237 Query: 255 LVMNFTADCWLEVTDATGKKLFSG-MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 +V + + W T A G+ + + + + + + Q +G V I G+PV Sbjct: 238 VVTVNSGELWFSAT-ADGQAVAPNVILNQGQSKSFSAQNNVTFHLGHVQGVSITVDGQPV 296 Query: 314 DLSR 317 L Sbjct: 297 QLPN 300 >UniRef50_A8U7Q8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U7Q8_9LACT Length = 285 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 97/313 (30%), Gaps = 56/313 (17%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +L+ AR+ G + + + ++ + IEE + R +I+ YA V + Sbjct: 4 IGEKLKEARKAKGYTLDDLQQMTKIQKRYLIAIEEGNYDVMPGKFYARAFIKQYADTVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF-------TWLVLFVVIGL 127 ++LL P + + + R K + T L+ + + + Sbjct: 64 NGDQLLEEYTDAVPHTHDEEYVEKVSTDQTRSGKNTENVFLTKVQEYLPTILIGLLAVAI 123 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 A ++ K + M + S E++ +S S + +++ A + + Sbjct: 124 VAAIYFAVIKTNNQGNEDMITKESDEITVSSADSISEEESVKESSESAVSEESEEAQGIE 183 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 ++ T + + +++ S Sbjct: 184 LLSSNGSTTTYSVTGIFEGSSLILTAS--------------------------------- 210 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAV 304 D W+ V + G + + + NL G + + IG A Sbjct: 211 ------------GGDSWVSV-EGDGTTIDAQLITDGSNLETEIPDGTSSLVVIIGNAPAT 257 Query: 305 QIQYQGKPVDLSR 317 ++ + GK V + Sbjct: 258 KVNFNGKDVPYAP 270 >UniRef50_A9BMV4 Putative uncharacterized protein n=3 Tax=Comamonadaceae RepID=A9BMV4_DELAS Length = 343 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 119/331 (35%), Gaps = 10/331 (3%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + ++T G LR ARE GLS +A L + + +E D A F+R + Sbjct: 16 ENAQTSMTAGTLLRQAREAAGLSLAGLAAALKVPAPKLEALEADDYAAFQDHVFMRALAQ 75 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVA-------PMQSFSLGKRRKKRDGWLMTFTWL 119 S R + + +L L + A +SF R+ + Sbjct: 76 SVCRTLRMDSASVLALLPRTQLKSLADDRGSINATFKERSFKATGTSLGRENGSRKVAII 135 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 VL ++ + ++ + EE A ++A + + V PA T+ Sbjct: 136 VLLLLAAAAAVYFLPKHEGDAEEPQAGASDAAALVQPAGTVSEPVAAQEPVA--PAATTP 193 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 + + A + + A P+ A+ T A PA + A Sbjct: 194 ADVPAAPASASASASASASASAPATSAPAAAAVPAPASTTTPAAPAAATVPAANAPADGA 253 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 + T LVM A W++V D++G+ + ++ G P + +G Sbjct: 254 AATSAATAAQTPGGVLVMKANAQSWVQVKDSSGRVVLQKTLAAGESIGAEGALPLSVIVG 313 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +++ +G+ +++++ R N VAR + Sbjct: 314 NASGTEVRVRGELLEVAKTTRDN-VARFEVK 343 >UniRef50_C6E0H1 Transcriptional regulator, XRE family n=2 Tax=Geobacter RepID=C6E0H1_GEOSM Length = 273 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 103/336 (30%), Gaps = 69/336 (20%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 +E + + G L++ RE GL + ++ + + + IEE + +++ Sbjct: 2 SEPEQNVGAEIPVGQYLKSVRESRGLKLEEASQVTKIGRNYLAAIEEGQFEKLPNVAYIK 61 Query: 63 GYIRSYARLVHIPEEELLPGLEKQ-APLRAAKVAPMQSFS----LGKRRKKRDGWLMTFT 117 G++R YA + + +E++ E++ AP + P Q + K + G Sbjct: 62 GFLRLYAGYLSLSGDEVVARYERELAPAAKPQAEPPQPHPGMENVEKAKLANHGR----- 116 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W + S E Q + P T Sbjct: 117 --------------WMIPALLLVLVVLAALFYSDGEQPPPPPQPAPPAPAPAPVMAPMT- 161 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 A V ++ +T P P Sbjct: 162 ----APVQMQVSSALLEPLTEPTP------------------------------------ 181 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 ++ + + L + F D WL +T + + G+ + L+ Sbjct: 182 -EGPRSAASAGKQEGVVLKLRFNRDSWLSIT-IDDSISQRYDLKAGDIIEWKGKRSFSLE 239 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 +G AV+ ++ G+P L+ + Q A + L A Q Sbjct: 240 LGDGGAVEGEFNGRP--LTALGQAGQPAHVDLKAGQ 273 >UniRef50_B1HR33 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HR33_LYSSC Length = 309 Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 29/304 (9%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RL+ AR G S + E ++ + IEE S ++R +I+ YA V + Sbjct: 7 LGTRLKEARLSKGYSLDDLQEITKIQKRYLVGIEEGNYSIMPGSFYVRAFIKQYADAVGL 66 Query: 75 PEEELLPGLEKQAPLRAAKVAP---MQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 EE+L + + P S S K K +M ++ + Sbjct: 67 NAEEILETYKNELPSTPNDQVSQSITNSPSRRKVTKGPSNKMMEAMPKIIVAL------- 119 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 ++S S + + +T+ + Sbjct: 120 --FIVVIIVAIWVLWQSKNSPGTSEGNTTSPEIEYDTNVK-------------PIDSAKD 164 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + A D + + + D T G + T D Sbjct: 165 KKEKEEKDALKNDQKDTDSKEETPTDEDQTDQTEEIKQTISAGTVEADGETTSYTLTGTD 224 Query: 252 PNALVMNFTADCWLEVTDATGKKLF--SGMQRKDGNLNLTGQAP--YKLKIGAPAAVQIQ 307 L + + ++ + + ++L + + + ++++G +I Sbjct: 225 TLKLKIEVSGPTFVGIRNQQQQELLTDTRVYNAGEVVEFDATTQNYVRIRLGNSTQAKIY 284 Query: 308 YQGK 311 + Sbjct: 285 INDE 288 >UniRef50_A0LDN4 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDN4_MAGSM Length = 566 Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 82/235 (34%), Gaps = 10/235 (4%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 GA L+ ARE GL+ + V ++ ++ +E+ A TF G++R Y R + + Sbjct: 25 LGAELKQAREARGLTIEQVHRATRIREGHLQALEQGTAELLPGQTFAVGFMRIYIRFLGL 84 Query: 75 PEEELLPGLEKQAPLRAAK-VAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 E L+ R + R + GWL+ + +VL + L G + W Sbjct: 85 DEARLIDRFSAAMSYRRVSLDTEFFAPPTETSRTRPGGWLIVISVVVLAI---LFGGYEW 141 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP------PASVDTT 187 +R Q + A SS S++ Q ++ + +D T Sbjct: 142 INRPPQDPPVAVPAPVSSRLSEQESDEAQLDRTEALDQSEVQPINGEGDISPGAPPLDGT 201 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + + +P++ A + + + + P P P + Sbjct: 202 ESTQERNDPDVQNGLGEPEELAGGTAEASKDEVKSIPPPILVGERSVMVTPPVTE 256 >UniRef50_B0K6K4 Uncharacterized protein-like protein n=8 Tax=Thermoanaerobacter RepID=B0K6K4_THEPX Length = 266 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 105/302 (34%), Gaps = 55/302 (18%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L++ R ++GL+ + + E +++ ++ IE+ A + +G+++SYA + + Sbjct: 4 LGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAP-MQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 EL+ E + + P ++ S K R+ + +T V+ V+I + + Sbjct: 64 DGNELVKKYEYLFQEKEEEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGF 123 Query: 134 QDRKAQQEE-ITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 Q ++ + + Q+ +E S+ SE ++P Sbjct: 124 YYFLIQVKKGLAPIPQQNQSEASTISEDKTNLP--------------------------- 156 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 Q + VS + + + ++ P Sbjct: 157 --------------QESNVSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVP---- 198 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 CW V G ++ G+ KD + + + +G P AV+I G+ Sbjct: 199 -------GEKCWFSVK-VDGNVVYEGLMTKDMSKIFDVKDSITILMGYPPAVKITVDGEE 250 Query: 313 VD 314 + Sbjct: 251 LP 252 >UniRef50_C6PDY6 Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PDY6_CLOTS Length = 271 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 101/307 (32%), Gaps = 60/307 (19%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L+NAR + G++ + E ++ ++ IE+ A + +G+++SYA V I Sbjct: 4 LGDILKNARLKKGMTLDDLQEITKIRTKYLKAIEDGDFGVMPALVYAKGFVKSYAEAVGI 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK------RDGWLMTFTWLVLFVVIGLS 128 ELL K Q KK L+ V+ V + Sbjct: 64 DPYELLNKYSYLFEDEKDKEEERQYVKPDIEEKKAFDIFESLRKLVKPFIGVIVVCLFAF 123 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 G ++ M +Q + L+ PL +T + TTS P + + T Sbjct: 124 GIYY-------------MVNQINRGLA---------PLPDTTQSSKDTTSKAPDNKNNTT 161 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 +N V +V++ +++ VD PA Sbjct: 162 SN------DVYNNNVKTTTFSVINSTKSEVDYKVVPA----------------------- 192 Query: 249 VADPNALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 D + ++ CW+ V G + + + ++ +G P +I Sbjct: 193 -GDSYKVDLSIPGQKCWVSVK-VDGASTYQYLMTSGMTKTFDVKNNIEILMGNPPDAKIT 250 Query: 308 YQGKPVD 314 G+ + Sbjct: 251 VDGQEIP 257 >UniRef50_O31771 Uncharacterized membrane protein ymfM n=9 Tax=Bacillus RepID=YMFM_BACSU Length = 288 Score = 106 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 94/290 (32%), Gaps = 35/290 (12%) Query: 28 LSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQA 87 +S + ++ + +EE ++R +I+ YA V + ++L +K Sbjct: 1 MSLDDLQAATKIQKRYLTALEEGNYDIIPGKFYVRAFIKQYAEAVGLDADQLFEEHKKDI 60 Query: 88 PLRAAKV--APMQSFSLGKRRKKRDGWLMTF--TWLVLFVVIGLSGAWWWQDRKAQQEEI 143 P + +L K K + T LV+ VI + + + + Sbjct: 61 PNTYHDDVSEKISGMNLQKEMPKPASKALELLPTILVILGVIVVIAIV-YAIIQFANHKN 119 Query: 144 TTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAV 203 + + +S + + SE +P +++ + +S T T +T Sbjct: 120 SDDHNAASEKAITQSESKYEIPKDSTLKENQNNSSEK-----ETDTKKETKENEDKKKEN 174 Query: 204 DPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADC 263 D ++ + AA AD L + + Sbjct: 175 DSEKLEI-----------------------KAAGTEGSLTTYEVSGADKIELELKASDSS 211 Query: 264 WLEVTDATGKKLFSGMQRKDGNL--NLTGQAPYKLKIGAPAAVQIQYQGK 311 W+ V D L G +KD ++T Q ++ G ++I+ GK Sbjct: 212 WIRVRDENSSSLKEGTLKKDETYKKDITDQKQVDIRTGYAPNLKIKINGK 261 >UniRef50_Q2JPT1 Putative uncharacterized protein n=2 Tax=Synechococcus RepID=Q2JPT1_SYNJB Length = 289 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 97/324 (29%), Gaps = 60/324 (18%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G+ LR RE GL+ VA ++ ++ +EE +++G+++ YA + Sbjct: 10 ALGSLLRQTREARGLTLTEVANDTFIRCQYLQALEEADLSRLPEPVYVQGFLKRYADYLG 69 Query: 74 IP-------EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 + LL AP A V +F+L + L++ V G Sbjct: 70 LDGETLSRRASPLLSAKTPHAPAPLAVVGQQPTFALRPLH-----LWAAYVVLIVLTVGG 124 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 LS E + LS+ S +G + + DP ++ P + Sbjct: 125 LSALL---------EGTGNPFGRWLVSLSTVSREGSGQQPPAANSPDPTLSAVQPTARQL 175 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 T Q + P V + +D P Sbjct: 176 FPTLDQWTRIQGVFPEVLDAHSGGAGRKPVRLDIRVVERP-------------------- 215 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 WL V A G+ +F + LN + L+ G V + Sbjct: 216 ----------------SWLRVI-ADGQTVFEATLQPGAELNWEAEQSIVLRTGNAGGVLV 258 Query: 307 QYQGKPVDLSRFIRTNQVARLTLN 330 + + +L R +V L Sbjct: 259 TFNDR--ELGVMGRFGEVKELMFE 280 >UniRef50_Q8EQS0 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQS0_OCEIH Length = 305 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 114/311 (36%), Gaps = 32/311 (10%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + GA+L+ AR G+S ++ E ++ + IEE + R +I+ YA V Sbjct: 1 MDVGAKLKEARLSSGISLDSLQETTKIQKRYLVAIEEGNLHILPGKFYARAFIKEYATAV 60 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKR------RKKRDGWLMTFTWLVLFVVIG 126 + ELL ++ P + +R + R ++ +VL V+ Sbjct: 61 GLDPNELLEEHREELPSTEEENVQYTRIQRTRRENNSNDKGSRISSVIPSIIVVLLVIGI 120 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + AW + + SS++ + +SE+ Q + T+ + +T ++ D Sbjct: 121 IIVAWLF------------IRANSSSDATDSSEEPQENNVIIEEGTNDSENNTDESAGDE 168 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 N + + + + ++++ S ++ +P + D+ V+ Sbjct: 169 EENNEENDGTSEGSEDNESEEDSSEDLSVEVIEEGTGSSPNSVI----GVSNYGDELTVS 224 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD---GNLNLTGQAPYKLKIGAPAA 303 V + + WL VT G+ L++ + + + T +G A Sbjct: 225 VDVTADDM-------ESWLGVTSGNGESLYNSIFNAEAAPQEWDATDYESISFNVGNTPA 277 Query: 304 VQIQYQGKPVD 314 V I G ++ Sbjct: 278 VVISINGTEIE 288 >UniRef50_C5RCH6 Transcription regulation protein n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCH6_WEIPA Length = 316 Score = 104 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 98/330 (29%), Gaps = 41/330 (12%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN E G L+ AR GLS + + ++ + IE + + + Sbjct: 1 MNEERNS------AIGQELQQARLDKGLSLDDIQQSTKIQKRYLAAIESGQFDQLPGAFY 54 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 R ++R YA V + + E + A + Sbjct: 55 ERAFVRQYATAVGLDAVAFMQKYENEDTETVAPDLSAARVDADNVTRAGMH--------- 105 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 Q + ++ +M + + + + +S S Sbjct: 106 -------------QTEETVADKTRSMMPKIIIGVVIVAIIAIIWVVVSSFAGSAKQESKN 152 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 ++V T + + ++ A ++ S A+ + A+ ++ A + Sbjct: 153 QSTVSVTTSQVASKKASSKKSATSTTASSESKSSSASSSSKASSKSSSEKKTAKADKVDL 212 Query: 241 DQAGVTTPVADPNALVM----------NFTADCWLEVTDATGKKLFSGMQRKDGNLNL-- 288 Q V+ N++ W++V+DA G L++G + Sbjct: 213 GQGTVSGTTVTYNSVKAPNKTMKMQLKAENGSSWMQVSDAAGTVLWNGTVADGKTQEVDI 272 Query: 289 -TGQAPYKLKIGAPAAVQIQYQGKPVDLSR 317 T + IG A ++ K VDL Sbjct: 273 PTTATGVSVSIGNALATKVSLNNKAVDLQS 302 >UniRef50_Q1IKD9 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKD9_ACIBL Length = 288 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 106/320 (33%), Gaps = 45/320 (14%) Query: 26 LGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEK 85 G+S +A + +++ +E++ F +G++RSYA+ + + E+E + Sbjct: 2 RGISLDEIAVATKIGTRSLKALEDENFSILPGGIFNKGFVRSYAKFLGLNEDEAVADYTA 61 Query: 86 QAPLRAAKVAPMQSFS-----------LGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 + V + S S + + G + LVL I G ++ Sbjct: 62 AVKEQPVSVKTIASQSAMAKANRLAAQQARESSHKAGIVRALILLVLSAGIAFGGYKVYR 121 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + ++ ++ Q + + + +S T+ P S P Sbjct: 122 AGYFKAFKMPSLHRQLKQQAQAPTPTTSVPSTTSSATSAPPPASQP-------------- 167 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 V P NA SP+ V + TT GA PL Sbjct: 168 ------TVVAPADNATSSPASTTVSKPESRIAEDTTTIRGAIPLEFT------------- 208 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + + T W+ +T G++ + ++ +G P +I GKPV Sbjct: 209 VSIKATGWSWMSIT-MDGRRPLQKTFAPHEQKEFKAKNRVRIVMGNPNGTEISLNGKPVA 267 Query: 315 LSRFIRTNQVARLTLNAEQS 334 +S + + + + QS Sbjct: 268 ISGDLTRPRTVVVNASGLQS 287 >UniRef50_C1TRT9 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT9_9BACT Length = 425 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 109/320 (34%), Gaps = 57/320 (17%) Query: 4 EATHDQNEAL-TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + D E+L + G RLR R + G + VA+ ++ S + IE + + + R Sbjct: 18 DLNSDNYESLASLGDRLREERNRQGFTLDYVADETKIRKSYLESIELGEMDVFNGNVYRR 77 Query: 63 GYIRSYARLVH-IP-----EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF 116 G+++ Y + + + L+ + + P + + G R+ R G Sbjct: 78 GFVKKYLGFLGRMDLWKSYDPILVENVSDKKPEPQPALGDFTPPARGFRKGSRKG----- 132 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 +L+L VI +G + W +R+ +E+ + ++ AE Sbjct: 133 VFLLLMAVIISAGWYVWSNREGLHDEVVRIQEEKVAEQEKR------------------- 173 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 A + +Q + + S + + A + D A Sbjct: 174 --------------------EGEAKLLAARQREIAAASADLASSDISEVALAGASVDSAV 213 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 P+ L + D W+ +T G+++F G + + + Sbjct: 214 SSSPASVESDIPI-----LTIKALKDSWIRIT-REGERVFGGTLKAGATSEVEATGLIHV 267 Query: 297 KIGAPAAVQIQYQGKPVDLS 316 G P + + + GK VD S Sbjct: 268 IYGRPETLSVNWNGKRVDPS 287 Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 3/115 (2%) Query: 221 AATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQ 280 + A P + L+ DCW++ T GK ++ G Sbjct: 308 TSDEAEALWKEPSRSVSAEKADTEEKPAPVPKKLLIRATKGDCWIKAT-RDGKTVYVGTL 366 Query: 281 RKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSP 335 +K + + K+ G P AV + GK D R +V R+ + S Sbjct: 367 KKGDQREMDLTSSIKVIFGNPTAVAVSLDGK--DAGRPGTPGRVGRIVYETDGSV 419 >UniRef50_C1SGR3 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGR3_9BACT Length = 311 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 111/318 (34%), Gaps = 23/318 (7%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G+ L+N RE LG V E+ + + +E + + + + ++++YA + + Sbjct: 4 LGSTLKNKRETLGYDLDKVTEQTRISADIIAVLERGEYKSMPSYNHAKNFVKNYAEYLKM 63 Query: 75 PEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 +E+ L+ + + + + K + +L ++I +G + Sbjct: 64 DLDEVQSLLDDECTKEDFNREVKYVAAPVTKETSAAPSGVKYIIPAILIIIILFTG---F 120 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + A ++ + + + ++ P++ + D+ + Sbjct: 121 KVFTAMEKGKDLKQTEINENIKKEVDETVDNPVSNDEVKEVIENLNQTEQQDSLSD---- 176 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 V ++N +P++ N D+ A + A V Sbjct: 177 -------QPVPDKENKPQTPAKENSDSGKVDKDENAAMAAFMPEKKEEPAAVAKTA---- 225 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 +NF CW+ ++ GK+ + K +T + + + IG A V I Y + + Sbjct: 226 --YVNFADVCWVHIS-IDGKEEMDFIAEKGNQREVTFRDYFLMDIGNAAVVSISYNNRTI 282 Query: 314 -DLSRFIRTNQVARLTLN 330 L + + + R ++ Sbjct: 283 AGLGAYKQPVKGLRFAVD 300 >UniRef50_B8CWG9 Helix-turn-helix n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWG9_HALOH Length = 258 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 73/177 (41%), Gaps = 9/177 (5%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 ++ G++L+ AR + GLS + ++++ ++V ++ +E D +++ +++ Y+ V Sbjct: 1 MSIGSKLKEARNKSGLSLEEISKKTKIRVRYLKALENDNYDIIPGEVYVKAFLKGYSNQV 60 Query: 73 HIPEEELLPGL----EKQAPLRAAKVAPMQ-----SFSLGKRRKKRDGWLMTFTWLVLFV 123 + + ++ E+QA + Q SF+L +K R+ +++ L+L Sbjct: 61 GLNGDAIVKEYLNMLEEQARKEREEALKEQEKNSSSFNLNIDKKVRNIIIVSLVGLLLIF 120 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 VI + + E TM + + + + N T + Sbjct: 121 VIIFNVFSNNSNHLPDTEAEQTMTQSADIDELEGIDNKPDINKNNEDTKQSSVEKQE 177 Score = 54.8 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 3/120 (2%) Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 P A + +Q+ + + W Sbjct: 135 PDTEAEQTMTQSADIDELEGIDNKPDINKNNEDTKQSSVEKQEKDVRLKEIELIARDRSW 194 Query: 265 LEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 + + G+ ++ G K + +G+ +LKIG A + ++ G V L + +V Sbjct: 195 INIK-IDGRSVYQGFIEKGETMKFSGEEEVELKIGNAAGITMKKDG--VLLGPWGGKGEV 251 >UniRef50_D0XIR9 Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XIR9_9CAUL Length = 377 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 106/308 (34%), Gaps = 25/308 (8%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 + +A T G+ LR ARE G S +A + +R +EED A + F G Sbjct: 25 DPVPSITDAATLGSGLRKARELSGRSMAELAADTRVHERYLRALEEDNVSALPSRVFAIG 84 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+R+YA + + E+ + +++ P + + + ++ + V+ + Sbjct: 85 YVRAYAGALGLDEQLAVERYKRETPDASVALQAPVGVAFEDVKRYSPRIIG----GVVLL 140 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 + + G +Q Q + + S GQ + + P +TP Sbjct: 141 AVAVIGWNVFQRVSLMQAPQPSDIAEVPESWSLGEVPGQDIVRVGAPMAAPPDQTTPALY 200 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + TP + A +DP + + A P AA P GA Sbjct: 201 I--------TPGLEAELTGIDPTD----TAAVAAAAARNAPPVQAAFNPRGA-------- 240 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 + A + +V+ L V A G+ LF+ + + PAA Sbjct: 241 -IYGASATASQVVLQAKKAGALVVRMADGRVLFARQLAAGEAWRAPADVSAIIDVSDPAA 299 Query: 304 VQIQYQGK 311 + G+ Sbjct: 300 FDVYLNGE 307 >UniRef50_B9XHC4 XRE family transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XHC4_9BACT Length = 168 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 + T LR RE L+ VAE ++ VR +EE A ++RG++R+YA Sbjct: 2 PDMSTVAEHLRQTRETKNLTINQVAEVTKIRTDHVRALEEGDYNVFSAPVYIRGFVRTYA 61 Query: 70 RLVHIPEEELLPGLEKQ----APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 + + +LL L+ + R QS + + + +VL +V+ Sbjct: 62 NFLKLDVPQLLAVLDGELGGTTKFREPPPLTDQSKGVMDFLTLQLSKVNWRVAIVLLLVL 121 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS 169 G++G + R + + + + G+++PL Sbjct: 122 GVAGFVYLGTRSSHKSSKSDPLSKLPPASYKPQPGGETLPLPAP 165 >UniRef50_Q67P24 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67P24_SYMTH Length = 313 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 102/344 (29%), Gaps = 93/344 (27%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G RL+ AR GL+ + V E ++ + +E + +++G++RSY + + Sbjct: 4 IGRRLKAARLAKGLTLEQVEEETRIRKKYLDALESGRTVLIPGEVYVKGFLRSYGNFLGL 63 Query: 75 PEEELLPGLEKQ-------------APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW--- 118 E L+ + P A P + + R + F Sbjct: 64 DGEGLVEEYKALKARPAAEDGAGNGGPAEAPAREPEAAIAASAPRASAEPRQPAFATPPR 123 Query: 119 ---------------------------LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSS 151 L+L + + +G W+W Sbjct: 124 RSSRSRPKRRRNGPGPGVYFLRRLMVALILILPLAAAGWWFWGR---------------- 167 Query: 152 AELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVV 211 Q P TA P +P+ Sbjct: 168 --------------------------QAAAPPPQEPGQVAQEPGTTAQQPEPEPEPEPEP 201 Query: 212 SPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFT-ADCWLEVTDA 270 P + P P P P T A L M+FT WLEV + Sbjct: 202 EPEPEQPPASGQPVP---AKPVITVGAPQGDEVDITITASEVQLEMDFTQGFPWLEVY-S 257 Query: 271 TGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 G+ L+ + G L+ TG+ ++++IG A Q+ G+PVD Sbjct: 258 GGETLYW--SKASGPLSFTGKD-FRIRIGFVAGFQLALNGEPVD 298 >UniRef50_B5VZE7 Putative uncharacterized protein n=3 Tax=Arthrospira RepID=B5VZE7_SPIMA Length = 308 Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 97/305 (31%), Gaps = 54/305 (17%) Query: 7 HDQNEALT-TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 HDQ + L+ G +LR+AR + S VA ++ ++ IEE + + +G I Sbjct: 26 HDQAQRLSDIGQQLRDARMKNSFSLGMVAAYTRIRTHLLQAIEEGEIDNLPEPIYTQGLI 85 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 R YA + + EEL P K L + + +T+T L++ V Sbjct: 86 RQYADALGLNGEELANFF---LPESGEKTLARSLKLLSLPQLRPTHLYLTYTLLIICAVN 142 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 LS + + A T T AS D Sbjct: 143 ALSYL-------------------------------------VPQSGELAVTQTESASGD 165 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 T T P T P SP Q+ + + ++ A + A Sbjct: 166 TVVTPQPNPVTTTP------------SPPQSQLVSQSSTTVVVAESSAPTPAPAPTPAPA 213 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 P+ + + + W+ + + GK F G+ T + + G V Sbjct: 214 PQPIIQDVEVGIVVKDESWVLI-EIDGKTEFQGILPGGTQKTWTAKTEVVVVAGNAGGVL 272 Query: 306 IQYQG 310 ++ Sbjct: 273 VKVNN 277 >UniRef50_Q1AW44 Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW44_RUBXD Length = 304 Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 83/307 (27%), Gaps = 35/307 (11%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + L G L+ AR GLS V + ++ + +E + + +++G+++ Sbjct: 13 EEDGGGLRIGEILQEARRDRGLSLHEVEQATKIRKRYLEGLEREDYSVLPDAVYVQGFLK 72 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 +YA + + E L L+++ + M G Sbjct: 73 TYANYLGLDGERLSQELKRRR--SPRRERRMNHAVPGSS--------------------- 109 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + + + + AE S + Sbjct: 110 -----------GFDKPLISPGGLAEAERSRFAPAVALTLAVVLLVAAVIGALYYVGQSSQ 158 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 A++ A + + + PAP + + Sbjct: 159 RASSPPEQQAAPAAGGGERPAEEAGGGQRDGGEAQRGPAPEQRRAEERQPAAGEEANAGE 218 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 LV A W+ + + G ++ G+ + L G AV++ Sbjct: 219 VSPETLEVLVSVEGAPSWMSIQ-SDGSVVYEGIAEPGFSQTFEASQEVTLTTGNAGAVRV 277 Query: 307 QYQGKPV 313 + G+ V Sbjct: 278 EVNGQSV 284 >UniRef50_A1BIX7 Helix-turn-helix domain protein n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BIX7_CHLPD Length = 298 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 105/331 (31%), Gaps = 60/331 (18%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ E+++ + L G L+ AR Q LS + V+ + S IE + Sbjct: 1 MHEESSYRSSLDLIAGD-LKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLP-KIY 58 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRR------KKRDGWLM 114 + ++SYAR + + ++ LL K+ + + +S R K+ Sbjct: 59 VFATLKSYARELGVGDDALLEQCRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFS 118 Query: 115 TFTWL----------VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSV 164 F+WL VL V + + A ++ + Sbjct: 119 FFSWLGGLVASRGIAVLMVALAILLALFFIRK---------------------------- 150 Query: 165 PLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATP 224 S+ P + T + AV + + + + Sbjct: 151 ------------PSSSPPPMIEPVVQTPVMLPQSSDSAVVDTLSGLSDIPSEPKEDVPSE 198 Query: 225 APTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVT-DATGKKLFSGMQRKD 283 P A + P A + + + A +V + W++V D + K G Sbjct: 199 TPVAPS-PAKALSTDSLSSAHASAPARQRLVVRIISDTSWVKVIADDSAKVYPGGRFPSG 257 Query: 284 GNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 L+ G+ + IG P V++ GK + Sbjct: 258 TVLHYEGKKKLWVSIGRPVNVELTLNGKKIP 288 >UniRef50_Q38YE1 Putative uncharacterized protein n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YE1_LACSS Length = 307 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 95/323 (29%), Gaps = 29/323 (8%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +LR AR + G + + + ++ + IEE A + ++R +I+ YA+ V + Sbjct: 4 IGQKLREARIEKGYTLDDLQQITKIQKRYLSSIEEGDFDALPGTFYVRAFIKQYAQTVGV 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E LL + + P + +S R + W Sbjct: 64 DSEALLAEYQDKLPNAKPEEYVEKSVENQTRLTRETTDSKWSKW---------------- 107 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + + + N + T ++ +V + T+ Sbjct: 108 ------RGLAPQIAVVAVVIVIVGIVYGITLSNRGKNRETLTETSSSVTVSGDQSTTKKA 161 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 + + S + A + Q T A Sbjct: 162 SSDDNQQKAQESKAKEASKASEQSKKEADKKAKETKLSASMTSMSGSQQAFTIKNLPNKA 221 Query: 255 LVMNFTAD---CWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAVQIQY 308 + F+A+ W+ + G ++ G + G + +K G A +++ Sbjct: 222 NTLTFSAENTTAWVGLI-VNGSTIWQGSVTPGTDQTTQLPAGVTQFSVKTGNGPATKMKI 280 Query: 309 QGKPVDLSRFIRTNQVARLTLNA 331 V+L+ T QV + A Sbjct: 281 NDTAVNLNPNNETVQVRTVNFTA 303 >UniRef50_B3QS81 Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS81_CHLT3 Length = 317 Score = 99.9 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 85/309 (27%), Gaps = 26/309 (8%) Query: 17 ARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPE 76 + L AR+ GLS + V +++ +K + +EE ++ ++ YA + I Sbjct: 15 SLLATARKDKGLSIEEVTQKVKVKPEYLLKLEEGNFGFLPPP-YVYAMLKEYASFLAIDP 73 Query: 77 EELLPGL--------EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + + E L + F+ + W G+ Sbjct: 74 KVIQQCRHDLNILTDEALNKLVVSNNEEKNDFASILENPEYRKW-------------GIV 120 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 GA + I+ + EL ++P T T T Sbjct: 121 GAAAFGALILLFIIISLFSGTPEPELIVKKVPETNLPAPPPVTPTQPNKPTEAKPAPQTK 180 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 + A P + P P + + Sbjct: 181 PKPPEKKEPVKEVPPKKPEVAKTEPPKPEPVKQPEPEPESVKVESPKPEIVQS----APT 236 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 LV T W++V G G+ + +++ IG V++ Sbjct: 237 GKTKTLLVKTLTDTSWVKVVSDGGSSTREGLVPPEQYRQYEASDEFEITIGRAETVEVFL 296 Query: 309 QGKPVDLSR 317 GKPV L R Sbjct: 297 DGKPVSLPR 305 >UniRef50_C2ETS7 Possible transcription regulation protein n=2 Tax=Lactobacillus RepID=C2ETS7_9LACO Length = 354 Score = 99.9 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 95/323 (29%), Gaps = 46/323 (14%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + +D + + G +LR+AR+ G + + + ++ + IE++K ++R + Sbjct: 2 SENDNEQQIQIGKKLRDARQAKGYTLDDLQQLTKIQKRYLIAIEDEKFDELPGDFYVRAF 61 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 I+ YA V + ELL +Q P + + R R + Sbjct: 62 IKQYADTVGLDGNELLKEFNEQLPKAKTEEYSDHISQAVETRANRRKTV----------- 110 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 + + M A + V D +T Sbjct: 111 -----------SQGVSKVRQYMPTIIIACVIVIVLAAIWVTAIVRGHQDASTK------- 152 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 +V + S + ++ P +AA A+ Sbjct: 153 -------------IDNSSVSVSGESRKKSSSSVKKSSTKPKKSAAIKLTEASRNNNSVTY 199 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK---LKIGAP 301 + L + + W VT G S + N+T + + +G Sbjct: 200 NAASLKKDAKLQIKTSGRAWNSVT-TDGTSALSRTMDANSTANVTIKRTTNTVVITVGNA 258 Query: 302 AAVQIQYQGKPVDLSRFIRTNQV 324 +A ++ K ++ + R N Sbjct: 259 SATTLKLGNKKINFTDNGRYNNT 281 >UniRef50_Q9KAA2 BH2388 protein n=1 Tax=Bacillus halodurans RepID=Q9KAA2_BACHD Length = 283 Score = 99.9 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 78/307 (25%), Gaps = 36/307 (11%) Query: 20 RNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEEL 79 R RE+ LS + ++ + IEE + + R +I++YA V + E+L Sbjct: 2 REIREEKQLSLDDLQRTTKIQKRYLLAIEEGRYDVLPGVFYARAFIKTYAEAVGLDPEQL 61 Query: 80 LPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQ 139 + P + + S +R L Sbjct: 62 FDEFSNELPNPQKDLPDRPARSERMKRTAPPVPKKKSKLFSLL-------------PMVA 108 Query: 140 QEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAP 199 + + +++ Q P V Sbjct: 109 AVAAILLLAIGIWYFAQGNDRAQEPPPEEHDVE---------------------AEVGED 147 Query: 200 APAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNF 259 + ++ + A A + +++ D + + F Sbjct: 148 PGVEEVEEEEEQPEDNGSDAAEDEQAEEADESELVHIESVGNRSYYELSGTDRFDVEITF 207 Query: 260 TADCWLEVTDATGKKLFSGMQRKDG--NLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSR 317 ++ + + G F+ + + +G+ + GA V + + + Sbjct: 208 DGTSYVAIENGLGNTFFAANAGEGDEQTYDFSGEEEIEFNFGASTFVNLTINDEAFEFPL 267 Query: 318 FIRTNQV 324 +V Sbjct: 268 DTPHQRV 274 >UniRef50_B1I309 Transcriptional regulator, XRE family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I309_DESAP Length = 241 Score = 99.5 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 1/137 (0%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 ++ G LR AR+ GLS E ++ + +EE++ + + ++R+YAR + Sbjct: 1 MSLGQSLREARKARGLSLDLAEEETKIRKKYLAALEEEQYHVLPGRVYAKAFLRTYARFL 60 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLG-KRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + ++ + Q PL A + A S+ + RKK + V+ +++ + + Sbjct: 61 GLDVDSVMAEFQAQNPLEAREAAAENGPSVPVEERKKSVIRSLLLLAGVIVLLVTFNSLY 120 Query: 132 WWQDRKAQQEEITTMAD 148 E + D Sbjct: 121 GAVRGGWSVSEEPSGPD 137 Score = 48.7 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 5/117 (4%) Query: 217 NVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF 276 +V + P P P + ++ CW+ V G++ F Sbjct: 128 SVSEEPSGPDIGVQNPLPVEPEPVPVEEPPAVAEGLDLVLQVVGGSCWMRVA-VDGEQAF 186 Query: 277 SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVA--RLTLNA 331 G L+ L++G AV +Q G+ DL + +V T+ Sbjct: 187 EGTVPAGQALSFEADEAISLRLGNAGAVLVQLNGE--DLGYLGQRGEVVSREFTVEG 241 >UniRef50_Q5WFW7 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFW7_BACSK Length = 296 Score = 99.5 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 30/304 (9%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G L+ RE+ ++ + ++ + IEE + R ++++YA + + Sbjct: 4 LGNYLKETREEKQITLDDLQRTTKIQKRYLAAIEEGNFDTLPGIFYARAFVKTYAEAIGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 +E+L + + P + + S S + R Sbjct: 64 DADEVLETYKNELPNPQTEAVDLPSRSERVKTSART-----------------------A 100 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + + ++A L + V + + D T T Sbjct: 101 PSRPGKGRGKSLASILVPILLIAAVVLVVVLIWNISGRDSGGEVQNEQEAGQTDTYDPPE 160 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 ++ + D P + + T V Sbjct: 161 NAGDEEGEGAADEDEAADEESGSEDEQTDKEPQLSLEETSG----NVSTYILTNVEAIET 216 Query: 255 LVMNFTADCWLEVTDATGKKLFS--GMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQGK 311 L + +++V D G+ + G + D +++G +L IG V+ ++ G Sbjct: 217 LKIEMGEGSYVQVRDRDGQAMDENGGDYKDDFEPDVSGLDALELNIGNGYGVERVEVNGL 276 Query: 312 PVDL 315 V+L Sbjct: 277 EVEL 280 >UniRef50_C2E0V4 Possible transcription regulation protein n=8 Tax=Lactobacillus jensenii RepID=C2E0V4_9LACO Length = 367 Score = 99.5 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + G +LR+ARE +GLS V + ++ + IE ++R +IR Sbjct: 11 EQEVIMANIGEKLRSAREAMGLSIADVEKTTKIQSRYLTAIENSDFDKLPGDFYVRAFIR 70 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD 110 YA++V + +ELL + P + S K+ Sbjct: 71 QYAQVVGLDGKELLAEYHQDVPETNSDEYVENSIDNKTEEVKKT 114 >UniRef50_Q1NC81 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NC81_9SPHN Length = 283 Score = 99.1 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 78/253 (30%), Gaps = 7/253 (2%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 + + T GA+LR ARE GLS Q VA R + + + +E D A + G+ R+ Sbjct: 15 EDTQPKTPGAKLRAAREAQGLSLQDVATRTRIALRQLEAVERDDYGALPGIPYAVGFARA 74 Query: 68 YARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 YAR V + E + + + ++F + L V+ ++IG Sbjct: 75 YARAVDVDEVAIAAEVREGVHGSDLGANRYEAFEPADPARVPSRTLAWTLAAVVLLLIGG 134 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 W Q E + + T A VD Sbjct: 135 YIIWRTQLFTPPTSEDIAADAPARPSAPPPGSAVAPIRQVPQTVVFTAVDDVWLRIVDEA 194 Query: 188 ATNTQT------PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 + + T PA A +P P +V P P A +P + Sbjct: 195 GERLKDGTMKKGESFTLPAGARNPTIL-TGRPQALSVTVGGKPVPPLGAADRTIADVPVN 253 Query: 242 QAGVTTPVADPNA 254 + A Sbjct: 254 AEALLARAAPAGQ 266 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 1/95 (1%) Query: 221 AATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQ 280 + A P + V P +V D WL + D G++L G Sbjct: 144 TPPTSEDIAADAPARPSAPPPGSAVAPIRQVPQTVVFTAVDDVWLRIVDEAGERLKDGTM 203 Query: 281 RKDGNLNLT-GQAPYKLKIGAPAAVQIQYQGKPVD 314 +K + L G + G P A+ + GKPV Sbjct: 204 KKGESFTLPAGARNPTILTGRPQALSVTVGGKPVP 238 >UniRef50_B2A3B9 Putative uncharacterized protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3B9_NATTJ Length = 307 Score = 99.1 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR ARE L+ + + ++ L+ ++ IE+ + +G IR+YA +V Sbjct: 20 DIGKKLRKAREAQNLTIEDLQKQTKLRTKYIKSIEKGDFSVFPGDVYAKGAIRNYAEVVG 79 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW----------LMTFTWLVLFV 123 + EL E + + K + + L+ F +VL + Sbjct: 80 LDFMELWEDYESVYQQESEQEDNSNEEQKDKEVSFLNSFSDKFIAILPVLVKFVAIVLVI 139 Query: 124 VIGLSGAWWWQDRKAQQE 141 I G +W D A E Sbjct: 140 GIIGYGVYWGYDYLAGIE 157 >UniRef50_Q0F2U3 Transcriptional regulator, XRE family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2U3_9PROT Length = 335 Score = 99.1 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 101/314 (32%), Gaps = 45/314 (14%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 Q G +L AR L A +L L+ + +E + + G++R Y Sbjct: 30 QTLLTDIGNKLTAARLALQEGLDEPARKLKLRRKHLEALESGNWDSMPDDVYAMGFLRQY 89 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + + + + + L+ A + R+ W + L + ++I + Sbjct: 90 SAYLRLDLTDEVERLKNSAYTLTRPLTFPDPPVAPSRQ-----WAWIASALFIILLIAFN 144 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 + Q + + TM+ ++AE P S+PPA Sbjct: 145 VLY-QQAPENHSPAVVTMSAPNTAE-------------------APVVESSPPAQ----- 179 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 T P PA P + APT ATT +P TP Sbjct: 180 --TTAPISPPAEPASKPDDKTPGETVGIVTEQTTQTAPTVATTRSTTQAIPKPARKTVTP 237 Query: 249 -VADPNALVMNFTADC-WLEVT------DATGKKLFSGMQRKDGNLNLTGQAP---YKLK 297 + W++++ D G+ + + ++ +++L + P + Sbjct: 238 QPPTTHTYRFEAVGSSVWIQISMPNPAGDGKGRLIKEALLQQGHHISL--KQPVDALWIT 295 Query: 298 IGAPAAVQIQYQGK 311 G +++I GK Sbjct: 296 CGNAPSLRILVDGK 309 >UniRef50_B7RT19 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RT19_9GAMM Length = 158 Score = 99.1 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 51/103 (49%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M ++ + +T GA LR AR +Q+ V +RL L V +E D + + F Sbjct: 1 MTSDVLSQVDAFVTPGALLRKARLNADFTQREVEDRLNLMPGYVELLERDDYQSLRSPAF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLG 103 RGY+R+YA+L+ + E +L ++Q + +++ SL Sbjct: 61 ARGYVRAYAQLMKLEEAAVLAAFDEQRETWEQQKQRVETQSLQ 103 >UniRef50_Q5UF01 Uncharacterized protein n=1 Tax=uncultured alpha proteobacterium EBAC2C11 RepID=Q5UF01_9PROT Length = 443 Score = 98.7 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 75/221 (33%), Gaps = 4/221 (1%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G+ L++AR G S + ++E+L + V + +E A ++ G++RSY R V + Sbjct: 39 IGSTLKDARLSQGFSLKDISEQLRISVDFLTKLESGSFSELPAPAYVVGFLRSYGRCVGL 98 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 + L+ +K + S ++ +++ + G W+W Sbjct: 99 APDPLVARYMAVTQGEGSKPSYKTPMSTRPPQRSAP----AVASMLVLFGLMAYGGWFWL 154 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 T D +AEL + ++ ++ S VDT + P Sbjct: 155 KTNDLPVLDVTENDTKTAELPLSPDRQGALINAASLDAPAKIDRVLDTLVDTAEVSANNP 214 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 + N +V+ +T A P Sbjct: 215 SKERTIKPFGSAFNTIVNQETDRSETELASNEKLALEPVEI 255 Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 57/180 (31%), Gaps = 7/180 (3%) Query: 134 QDRKAQQEEITTMADQSSAELSSNS---EQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 Q+ + E+ + + + S E + + T A +P S + Sbjct: 233 QETDRSETELASNEKLALEPVEIGSSMFETRLPEQVESDLTVVEAQILSPSESEPSNQIL 292 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 T A DP +++ ++A + T P P D +A Sbjct: 293 TDELVERRIPVARDPASLDLLNTNRAIANLILTDELVERRIPVARDPASLDLLNTNRAIA 352 Query: 251 D----PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 + + + A W+E+ G+++ + + + + + G L G + + Sbjct: 353 NLRDPAKEITIRAVAASWVEIVRDNGEEVLAKLMQAGDSYVVEGNTRLFLSTGNAGGLTV 412 >UniRef50_Q2RJK2 Transcriptional regulator, XRE family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJK2_MOOTA Length = 249 Score = 98.7 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 9/248 (3%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR+ R++ G+S + E +++ + +E + G++R+YAR + + Sbjct: 4 VGEILRSTRQEKGISLREAEEATKIRLKYLEALENGTYDEIPGRVYALGFLRNYARFLGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 EL +++ P + + + R GW L G+ W Sbjct: 64 DPAELTALFKEEYPPKEESYQVEEPPGITTPRLTTRGWGRWLLIL------GVILVLWGV 117 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA---TNT 191 +R + + ++ + + + P+ + T Sbjct: 118 NRLYNYYRPSPEQSPAPPPVTEPAPATPAPVTPVQPASPPSQVQGVEVKIRATGNCWVGA 177 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + + P V T + T P V T AD Sbjct: 178 VVDGKADFSGTLKPGDEKVFQGKDKVSVTLGSAGAVEVTLNGQVQPPLGKAGSVVTFEAD 237 Query: 252 PNALVMNF 259 A + Sbjct: 238 KGANQLRI 245 Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Query: 216 ANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWL-EVTDATGKK 274 + + + P P P AP+ Q + + T +CW+ V D GK Sbjct: 126 PSPEQSPAPPPVTEPAPATPAPVTPVQPASPPSQVQGVEVKIRATGNCWVGAVVD--GKA 183 Query: 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 FSG + G+ + +G+ AV++ G+ + V + Sbjct: 184 DFSGTLKPGDEKVFQGKDKVSVTLGSAGAVEVTLNGQVQP--PLGKAGSVVTFEAD 237 >UniRef50_D1C2J1 Helix-turn-helix domain-containing protein n=2 Tax=Thermomicrobia (class) RepID=D1C2J1_SPHTD Length = 274 Score = 98.7 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 91/295 (30%), Gaps = 42/295 (14%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR+AR G+S + + + +E ++ + RG +R+YA+ + + Sbjct: 5 GELLRHARSYKGVSLREAERATKINRHHLAALEREEFEELPPLIYARGIVRNYAQYLGLD 64 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 +L E+ R+ + + W F + V++ + Sbjct: 65 PVAVLALFEEVHGQRSGGFRVVPATKPLNI---PSHWAPNFAIIAFMVIMSAVIFAFLYS 121 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 E+ L+S + ++ P T ++ + Sbjct: 122 AYFAPEDAPPTGPAGIVGLASPTPSAEASP-----------------------TGSEGGS 158 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 +T P +P V P+ TPV+ + Sbjct: 159 ITIATPTTEPTSTPVPEPT--------------VPAAAETPTEEPTPTPEPTPVSTTHTF 204 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 + T+ W++VT G+ +FS + G+ Y + G +Q+ G Sbjct: 205 AVTATSSVWVQVT-VDGQVVFSDVLPGGETRVFEGEQMY-VTAGNAPFIQVAVDG 257 >UniRef50_C7THU0 Xre-like DNA-binding protein n=8 Tax=Lactobacillus RepID=C7THU0_LACRL Length = 311 Score = 98.3 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 104/318 (32%), Gaps = 27/318 (8%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +LR+AR + G + + + ++ + IEE A ++ +I+ YA V + Sbjct: 4 IGQKLRDARIEKGYTIDDLQQITKIQKRYLIAIEEGHFDALPGDFYVLAFIKQYADTVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKR--RKKRDGWLMTFTWLVLFVVIGLSGAWW 132 +ELL ++ P + QS R R + + + Sbjct: 64 DGDELLTQFQQDIPEPQPQEYAAQSVENKTRATRAEEASPVNRLRR-------------Y 110 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 I + L S S Q++P ++ + + S+ AS + +++ Sbjct: 111 LPQIAIAAFVIVAIIVIYVVMLFSQSGPKQTIPADSESVAVSSKRSSSKASKSSKTSSSS 170 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 + ++ + + + A + + + A T T A+ Sbjct: 171 KSSKSSASSSSKSSEKASKESKKKSDKLDISVAAANGATQAVTLKNLPTSGNKLTLGANG 230 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAVQIQYQ 309 A W+ V G + G +T + ++++ G A I+ Sbjct: 231 --------ATAWISVI-VNGSTTWQGSLTSGNTQEVTLPDNTSTFQVRSGNATATTIELN 281 Query: 310 GKPVDLSRFIRTNQVARL 327 GK VD+S + Sbjct: 282 GKKVDISNGTSVVRTITF 299 >UniRef50_Q7ND38 Glr4398 protein n=1 Tax=Gloeobacter violaceus RepID=Q7ND38_GLOVI Length = 262 Score = 98.3 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 88/266 (33%), Gaps = 9/266 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M TE+ + + G+ L R+Q G S V+ER + + IE + + Sbjct: 1 MTTESFQPDS-LKSVGSLLARGRQQRGWSVDDVSERTRIPRRYLLAIESGQTDHLPEPVY 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAA----KVAPMQSFSLGKRRKKRDGWLMTF 116 +R +IR Y+ LV + ELL L+ A A S SLGK + + + Sbjct: 60 VRAFIRKYSDLVELDGTELLRELQPAAAAAEAVTAGTPIERASASLGKPTLRPFHAWLLY 119 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 LV+ + G S + R + E ++ + A + Q P +T A Sbjct: 120 GALVILALGGFS----YLQRSQEPEVVSAVKPTKPAPTKPAQGKTQKPPAKPTTQGAGAF 175 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 PAS T A A + P A D A T G Sbjct: 176 GPPAPASKGLQMQLAMTQASWVRVIADGRKAFEGELPVGAKRDWQAEKQFTVRAGNAGGV 235 Query: 237 PLPTDQAGVTTPVADPNALVMNFTAD 262 + + + + F + Sbjct: 236 LITLNDRSLGQLGKSGEVVERVFRPE 261 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 4/121 (3%) Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA-GVTTPVADPNALVMNFTADC 263 Q+ VVS + PA P A G P + + + T Sbjct: 136 SQEPEVVSAVKPTKPAPTKPAQGKTQKPPAKPTTQGAGAFGPPAPASKGLQMQLAMTQAS 195 Query: 264 WLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ 323 W+ V A G+K F G + + + ++ G V I + L + ++ + Sbjct: 196 WVRVI-ADGRKAFEGELPVGAKRDWQAEKQFTVRAGNAGGVLITLNDR--SLGQLGKSGE 252 Query: 324 V 324 V Sbjct: 253 V 253 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7LKC2 Cytoskeleton protein rodZ n=62 Tax=Enterobacteri... 275 1e-72 UniRef50_A7MGV6 Cytoskeleton protein rodZ n=51 Tax=Enterobacteri... 261 4e-68 UniRef50_C8Q4J6 Transcriptional regulator, XRE family n=8 Tax=En... 251 3e-65 UniRef50_B1JS04 Cytoskeleton protein rodZ n=32 Tax=Enterobacteri... 247 3e-64 UniRef50_D1P3Q8 Putative membrane protein n=3 Tax=Providencia Re... 238 2e-61 UniRef50_D2TXC4 DNA-binding protein n=1 Tax=Arsenophonus nasonia... 236 6e-61 UniRef50_C4UGF5 Uncharacterized HTH-type transcriptional regulat... 232 1e-59 UniRef50_C2LI02 Helix-turn-helix DNA-binding domain protein n=3 ... 231 3e-59 UniRef50_C6CAL7 Transcriptional regulator, XRE family n=1 Tax=Di... 229 9e-59 UniRef50_B2Q0X0 Putative uncharacterized protein n=1 Tax=Provide... 229 1e-58 UniRef50_Q1ZRE7 Hypothetical DNA-binding protein n=4 Tax=Photoba... 227 3e-58 UniRef50_C4LC36 Transcriptional regulator, XRE family n=1 Tax=To... 221 3e-56 UniRef50_Q6LU50 Hypothetical DNA-binding protein n=1 Tax=Photoba... 219 9e-56 UniRef50_A0KJ43 Putative uncharacterized protein n=2 Tax=Aeromon... 215 2e-54 UniRef50_C9NQN4 Putative uncharacterized protein n=1 Tax=Vibrio ... 215 2e-54 UniRef50_A6AQ33 Integral membrane protein n=14 Tax=Vibrionales R... 214 4e-54 UniRef50_B8K783 Integral membrane protein n=4 Tax=Vibrio RepID=B... 213 7e-54 UniRef50_C9P6C4 Putative uncharacterized protein n=2 Tax=Vibrio ... 212 1e-53 UniRef50_Q5E773 Integral membrane protein n=3 Tax=Aliivibrio Rep... 212 2e-53 UniRef50_D0I7P6 Putative uncharacterized protein n=1 Tax=Grimont... 209 8e-53 UniRef50_B8CKR0 DNA-binding protein, putative n=1 Tax=Shewanella... 209 9e-53 UniRef50_B0TLI3 Putative uncharacterized protein n=2 Tax=Shewane... 204 4e-51 UniRef50_C6XEI7 Putative uncharacterized protein n=1 Tax=Methylo... 203 9e-51 UniRef50_A1S864 Putative uncharacterized protein n=1 Tax=Shewane... 200 6e-50 UniRef50_C6MCA6 Putative uncharacterized protein n=1 Tax=Nitroso... 198 3e-49 UniRef50_B1KKJ1 Putative uncharacterized protein n=1 Tax=Shewane... 197 3e-49 UniRef50_Q085U7 Putative uncharacterized protein n=1 Tax=Shewane... 195 1e-48 UniRef50_Q12PT5 Putative uncharacterized protein n=1 Tax=Shewane... 195 3e-48 UniRef50_Q1QTK9 Transcriptional regulator, XRE family n=1 Tax=Ch... 193 7e-48 UniRef50_B4RV90 Putative uncharacterized protein n=2 Tax=Alterom... 193 9e-48 UniRef50_C9R6E7 Putative uncharacterized protein n=2 Tax=Pasteur... 193 1e-47 UniRef50_A3QCG1 Putative uncharacterized protein n=1 Tax=Shewane... 192 2e-47 UniRef50_C6AJL0 Putative uncharacterized protein n=1 Tax=Aggrega... 192 2e-47 UniRef50_Q3ICZ4 Putative transcriptional regulator, HTH domain n... 192 2e-47 UniRef50_B9CX69 Putative uncharacterized protein n=2 Tax=Actinob... 190 5e-47 UniRef50_A5EVN3 Putative uncharacterized protein n=1 Tax=Dichelo... 187 4e-46 UniRef50_A8FT69 Putative uncharacterized protein n=1 Tax=Shewane... 186 8e-46 UniRef50_Q0HKW0 Putative uncharacterized protein n=11 Tax=Shewan... 186 9e-46 UniRef50_Q5QYA8 Predicted transcriptional regulator, contains N-... 186 1e-45 UniRef50_A4C7F7 Putative transcriptional regulator, HTH domain n... 185 2e-45 UniRef50_A3N1H9 Putative uncharacterized protein n=4 Tax=Pasteur... 184 3e-45 UniRef50_C6IW30 Helix-turn-helix domain-containing protein n=1 T... 184 5e-45 UniRef50_C5TVA8 XRE family transcriptional regulator n=3 Tax=Des... 183 5e-45 UniRef50_A6FA10 Putative uncharacterized protein n=1 Tax=Moritel... 183 7e-45 UniRef50_Q2LVM8 Hypothetical membrane protein n=1 Tax=Syntrophus... 183 9e-45 UniRef50_A4XY33 Helix-turn-helix domain protein n=1 Tax=Pseudomo... 183 1e-44 UniRef50_Q2BGS7 Putative uncharacterized protein n=1 Tax=Neptuni... 182 2e-44 UniRef50_A6VV05 Putative uncharacterized protein n=1 Tax=Marinom... 182 2e-44 UniRef50_A4BSV3 Putative uncharacterized protein n=1 Tax=Nitroco... 181 3e-44 UniRef50_C5S9Y0 Transcriptional regulator, XRE family n=1 Tax=Al... 181 3e-44 UniRef50_UPI0001698B56 hypothetical protein Epers_35392 n=1 Tax=... 181 4e-44 UniRef50_A6VQX7 Helix-turn-helix domain protein n=4 Tax=Pasteure... 181 4e-44 UniRef50_B0KPI6 Transcriptional regulator, XRE family n=22 Tax=P... 180 4e-44 UniRef50_A1TZP9 Putative uncharacterized protein n=1 Tax=Marinob... 180 5e-44 UniRef50_A6ADB9 Integral membrane protein (Fragment) n=34 Tax=Vi... 179 1e-43 UniRef50_C7LQ79 Transcriptional regulator, XRE family n=1 Tax=De... 179 1e-43 UniRef50_Q7VME3 Putative uncharacterized protein n=1 Tax=Haemoph... 178 2e-43 UniRef50_UPI0000E0F4D9 hypothetical protein GHTCC_02974 n=1 Tax=... 178 2e-43 UniRef50_C7R5S7 Putative uncharacterized protein n=1 Tax=Kangiel... 178 2e-43 UniRef50_A3Y633 Putative uncharacterized protein n=1 Tax=Marinom... 178 3e-43 UniRef50_Q47WB9 Putative uncharacterized protein n=1 Tax=Colwell... 178 3e-43 UniRef50_A1K3Y8 Transcriptional regulator n=2 Tax=Rhodocyclaceae... 178 3e-43 UniRef50_Q2SDW3 Uncharacterized protein conserved in bacteria n=... 177 4e-43 UniRef50_C0N2P2 Putative uncharacterized protein n=1 Tax=Methylo... 177 7e-43 UniRef50_A3JJP6 Putative uncharacterized protein n=1 Tax=Marinob... 177 7e-43 UniRef50_B6WRD8 Putative uncharacterized protein n=1 Tax=Desulfo... 176 1e-42 UniRef50_A0YCF8 Putative uncharacterized protein n=1 Tax=marine ... 175 1e-42 UniRef50_C1PG13 Transcriptional regulator, XRE family n=1 Tax=Ba... 175 3e-42 UniRef50_UPI0001788661 transcriptional regulator, XRE family n=1... 175 3e-42 UniRef50_D2L1A7 Transcriptional regulator, XRE family n=1 Tax=De... 174 3e-42 UniRef50_Q47BR5 Putative uncharacterized protein n=1 Tax=Dechlor... 174 3e-42 UniRef50_B8F8B5 Putative uncharacterized protein n=1 Tax=Haemoph... 173 6e-42 UniRef50_Q57065 Uncharacterized protein HI0367 n=17 Tax=Pasteure... 173 6e-42 UniRef50_C9KPY7 Putative transcriptional regulator n=1 Tax=Mitsu... 173 1e-41 UniRef50_Q1H0U8 Putative uncharacterized protein n=1 Tax=Methylo... 172 1e-41 UniRef50_B3PDM0 Putative DNA-binding protein n=1 Tax=Cellvibrio ... 172 1e-41 UniRef50_D0KWA6 Putative uncharacterized protein n=1 Tax=Halothi... 172 2e-41 UniRef50_C9S0F6 Transcriptional regulator, XRE family n=7 Tax=Ge... 172 2e-41 UniRef50_A4JEP1 Transcriptional regulator, XRE family n=6 Tax=Bu... 172 2e-41 UniRef50_A6EWG5 Putative uncharacterized protein n=1 Tax=Marinob... 172 2e-41 UniRef50_Q0AE41 Putative uncharacterized protein n=2 Tax=Nitroso... 172 2e-41 UniRef50_C0GM52 Putative uncharacterized protein n=1 Tax=Desulfo... 171 4e-41 UniRef50_C6WV26 Putative uncharacterized protein n=1 Tax=Methylo... 170 6e-41 UniRef50_A3WP02 Predicted transcriptional regulator, contains N-... 170 6e-41 UniRef50_B8GTN5 Transcriptional regulator n=1 Tax=Thioalkalivibr... 170 6e-41 UniRef50_C4KCN7 Transcriptional regulator n=1 Tax=Thauera sp. MZ... 170 6e-41 UniRef50_UPI0001C42506 hypothetical protein BpOF4_19605 n=1 Tax=... 170 7e-41 UniRef50_Q3SL71 Putative uncharacterized protein n=1 Tax=Thiobac... 170 8e-41 UniRef50_Q1LLJ0 Transcriptional regulator, XRE family n=2 Tax=Cu... 170 9e-41 UniRef50_A6GNU8 Putative uncharacterized protein n=1 Tax=Limnoba... 168 2e-40 UniRef50_B0THU0 Putative uncharacterized protein n=1 Tax=Helioba... 168 2e-40 UniRef50_B5EJF2 Transcriptional regulator, XRE family n=2 Tax=Ac... 168 2e-40 UniRef50_Q15R55 Transcriptional regulator, XRE family n=1 Tax=Ps... 168 2e-40 UniRef50_B2U9U8 Transcriptional regulator, XRE family n=6 Tax=Ra... 168 2e-40 UniRef50_Q0A987 Transcriptional regulator, XRE family n=1 Tax=Al... 168 3e-40 UniRef50_C8QXV7 Putative uncharacterized protein n=1 Tax=Desulfu... 168 3e-40 UniRef50_D1CBL2 Putative uncharacterized protein n=1 Tax=Thermob... 168 3e-40 UniRef50_C6NZ97 Putative uncharacterized protein n=1 Tax=Siderox... 168 3e-40 UniRef50_Q13X27 Transcriptional regulator, XRE family n=26 Tax=B... 167 5e-40 UniRef50_Q0VND9 Putative uncharacterized protein n=2 Tax=Alcaniv... 167 6e-40 UniRef50_A6CQ51 Putative uncharacterized protein n=1 Tax=Bacillu... 167 6e-40 UniRef50_C1DD42 Transcriptional regulator n=1 Tax=Laribacter hon... 166 1e-39 UniRef50_B8IZ93 Putative uncharacterized protein n=1 Tax=Desulfo... 166 1e-39 UniRef50_B5WST2 Transcriptional regulator, XRE family n=4 Tax=Bu... 166 1e-39 UniRef50_B8DFT2 Conserved DNA-binding domain protein n=16 Tax=Li... 166 1e-39 UniRef50_B5JY14 Putative uncharacterized protein n=1 Tax=gamma p... 165 2e-39 UniRef50_C3AP52 Transcriptional regulator n=5 Tax=Bacillus RepID... 165 2e-39 UniRef50_C4XS50 Xre family DNA-binding protein n=1 Tax=Desulfovi... 165 2e-39 UniRef50_C0ZF19 Putative DNA-binding protein n=1 Tax=Brevibacill... 165 2e-39 UniRef50_A7JX56 Putative uncharacterized protein n=2 Tax=Mannhei... 165 3e-39 UniRef50_C8NBB0 Putative uncharacterized protein n=1 Tax=Cardiob... 165 3e-39 UniRef50_C7QRV5 Putative uncharacterized protein n=2 Tax=Cyanoth... 164 4e-39 UniRef50_C4GFD8 Putative uncharacterized protein n=1 Tax=Kingell... 164 5e-39 UniRef50_C8X3H6 XRE family transcriptional regulator n=1 Tax=Des... 164 5e-39 UniRef50_Q1MRL8 Uncharacterized protein conserved in bacteria n=... 163 5e-39 UniRef50_C8PVJ8 Putative uncharacterized protein n=1 Tax=Enhydro... 163 6e-39 UniRef50_A6SZX1 Uncharacterized conserved protein n=2 Tax=Oxalob... 163 1e-38 UniRef50_Q81A13 Transcriptional regulator n=70 Tax=Bacillus cere... 162 1e-38 UniRef50_A0AIJ7 Complete genome n=3 Tax=Listeria RepID=A0AIJ7_LISW6 162 2e-38 UniRef50_B3R1K3 Putative transcriptional regulator yfgA; cro/C1-... 161 3e-38 UniRef50_B9YKG8 Putative uncharacterized protein n=1 Tax='Nostoc... 160 5e-38 UniRef50_A8VT56 Uncharacterized protein-like protein n=1 Tax=Bac... 160 6e-38 UniRef50_D1U5G8 Transcriptional regulator, XRE family n=1 Tax=De... 160 8e-38 UniRef50_B8DPF8 Transcriptional regulator, XRE family n=1 Tax=De... 160 8e-38 UniRef50_Q8YY03 Alr1052 protein n=2 Tax=Nostocaceae RepID=Q8YY03... 160 9e-38 UniRef50_A7HTY1 Putative uncharacterized protein n=1 Tax=Parviba... 159 1e-37 UniRef50_C7JGR8 Putative uncharacterized protein n=8 Tax=Acetoba... 159 1e-37 UniRef50_Q2JPT1 Putative uncharacterized protein n=2 Tax=Synecho... 159 1e-37 UniRef50_C6BV70 Transcriptional regulator, XRE family n=1 Tax=De... 158 2e-37 UniRef50_Q2B1K4 Putative uncharacterized protein n=1 Tax=Bacillu... 158 2e-37 UniRef50_A5VIW4 Uncharacterized protein n=11 Tax=Lactobacillus R... 158 2e-37 UniRef50_B7R9Q0 Putative uncharacterized protein n=2 Tax=Thermoa... 157 4e-37 UniRef50_C1XSS0 Uncharacterized conserved protein n=2 Tax=Meioth... 157 6e-37 UniRef50_C7I047 Putative uncharacterized protein n=1 Tax=Thiomon... 156 9e-37 UniRef50_C0DW30 Putative uncharacterized protein n=1 Tax=Eikenel... 156 1e-36 UniRef50_B9TIK3 Putative uncharacterized protein n=1 Tax=Ricinus... 156 1e-36 UniRef50_C5BLW0 Transcriptional regulator, Cro/CI family n=1 Tax... 156 1e-36 UniRef50_Q0BUK1 DNA-binding protein n=1 Tax=Granulibacter bethes... 155 2e-36 UniRef50_Q2W6V6 Uncharacterized protein n=3 Tax=Magnetospirillum... 155 2e-36 UniRef50_Q30ZR3 Transcriptional regulator, XRE family n=1 Tax=De... 155 3e-36 UniRef50_C8WWM2 Transcriptional regulator, XRE family n=2 Tax=Al... 155 3e-36 UniRef50_Q39S75 Transcriptional regulator, putative n=2 Tax=Geob... 154 4e-36 UniRef50_B0SW88 Putative uncharacterized protein n=2 Tax=Cauloba... 154 4e-36 UniRef50_C0GKG3 Putative uncharacterized protein n=1 Tax=Dethiob... 154 4e-36 UniRef50_D1B786 Putative uncharacterized protein n=1 Tax=Therman... 153 6e-36 UniRef50_D2LSB0 Transcriptional regulator, XRE family n=1 Tax=Ba... 153 6e-36 UniRef50_A0LP00 Putative uncharacterized protein n=1 Tax=Syntrop... 152 2e-35 UniRef50_B1WY62 Putative uncharacterized protein n=2 Tax=Cyanoth... 152 2e-35 UniRef50_C9LVZ7 Transcriptional regulator, XRE family n=1 Tax=Se... 151 3e-35 UniRef50_C5CXG5 Putative uncharacterized protein n=1 Tax=Variovo... 151 3e-35 UniRef50_Q01SZ1 Transcriptional regulator, XRE family n=1 Tax=Ca... 151 3e-35 UniRef50_A9HJ46 Putative uncharacterized protein n=1 Tax=Glucona... 151 3e-35 UniRef50_C1D1C0 Putative uncharacterized protein n=1 Tax=Deinoco... 151 3e-35 UniRef50_Q5FUT7 Putative uncharacterized protein n=1 Tax=Glucono... 151 4e-35 UniRef50_C0EJV6 Putative uncharacterized protein n=4 Tax=Neisser... 151 4e-35 UniRef50_A2SHB6 Putative uncharacterized protein n=1 Tax=Methyli... 150 5e-35 UniRef50_C6PDY6 Putative uncharacterized protein n=1 Tax=Thermoa... 150 7e-35 UniRef50_C2ETS7 Possible transcription regulation protein n=2 Ta... 150 8e-35 UniRef50_D0XYY9 Transcriptional regulator, XRE family n=1 Tax=Ca... 150 8e-35 UniRef50_C7THU0 Xre-like DNA-binding protein n=8 Tax=Lactobacill... 150 9e-35 UniRef50_Q38YE1 Putative uncharacterized protein n=1 Tax=Lactoba... 149 1e-34 UniRef50_B9ZLM4 Transcriptional regulator, XRE family n=1 Tax=Th... 149 1e-34 UniRef50_A7NIS6 Transcriptional regulator, XRE family n=5 Tax=Ch... 149 1e-34 UniRef50_UPI0001692BFA hypothetical protein Plarl_10797 n=1 Tax=... 149 2e-34 UniRef50_O31771 Uncharacterized membrane protein ymfM n=9 Tax=Ba... 148 2e-34 UniRef50_A6FNN0 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt... 148 2e-34 UniRef50_Q1AW44 Putative uncharacterized protein n=1 Tax=Rubroba... 148 2e-34 UniRef50_Q21KT4 Putative uncharacterized protein n=1 Tax=Sacchar... 148 3e-34 UniRef50_Q21W27 Putative uncharacterized protein n=1 Tax=Rhodofe... 148 3e-34 UniRef50_A0LV12 Putative uncharacterized protein n=1 Tax=Acidoth... 148 3e-34 UniRef50_Q3A2Z7 Putative uncharacterized protein n=1 Tax=Pelobac... 147 4e-34 UniRef50_B9Z686 Transcriptional regulator, XRE family n=2 Tax=Ch... 147 5e-34 UniRef50_A1B324 Putative uncharacterized protein n=3 Tax=Rhodoba... 147 5e-34 UniRef50_B7GJN6 Uncharacterized HTH XRE-family DNA-binding prote... 147 5e-34 UniRef50_B6IUT5 Putative uncharacterized protein n=1 Tax=Rhodosp... 147 7e-34 UniRef50_Q1NPX4 Helix-turn-helix motif n=2 Tax=delta proteobacte... 147 7e-34 UniRef50_Q608X3 Putative uncharacterized protein n=1 Tax=Methylo... 147 7e-34 UniRef50_A8U7Q8 Putative uncharacterized protein n=1 Tax=Carnoba... 147 7e-34 UniRef50_A5G5P0 Helix-turn-helix domain protein n=2 Tax=Geobacte... 147 8e-34 UniRef50_B7A9Q8 PEGA domain protein n=1 Tax=Thermus aquaticus Y5... 147 8e-34 UniRef50_C3X7I5 Predicted protein n=2 Tax=Oxalobacter formigenes... 146 1e-33 UniRef50_B0K6K4 Uncharacterized protein-like protein n=8 Tax=The... 145 2e-33 UniRef50_Q1WT11 Transcriptional regulator n=3 Tax=Lactobacillus ... 145 2e-33 UniRef50_B1XXL4 Putative uncharacterized protein n=1 Tax=Leptoth... 145 2e-33 UniRef50_Q12AB7 Putative uncharacterized protein n=1 Tax=Polarom... 145 2e-33 UniRef50_B5VZE7 Putative uncharacterized protein n=3 Tax=Arthros... 145 3e-33 UniRef50_C6D2C8 Transcriptional regulator, XRE family n=1 Tax=Pa... 145 3e-33 UniRef50_Q04BK0 XRE-like DNA-binding protein n=2 Tax=Lactobacill... 144 4e-33 UniRef50_C2D472 Transcription regulation protein n=3 Tax=Lactoba... 144 4e-33 UniRef50_C7RN39 Putative uncharacterized protein n=1 Tax=Candida... 144 5e-33 UniRef50_B1HR33 Putative uncharacterized protein n=2 Tax=Bacilla... 144 5e-33 UniRef50_Q04R20 Transcriptional regulator n=7 Tax=Leptospira Rep... 144 5e-33 UniRef50_C6E0H1 Transcriptional regulator, XRE family n=2 Tax=Ge... 143 6e-33 UniRef50_B4SSW5 Transcriptional regulator, XRE family n=20 Tax=X... 143 6e-33 UniRef50_C5RCH6 Transcription regulation protein n=1 Tax=Weissel... 143 6e-33 UniRef50_Q1ZDU0 Putative uncharacterized protein n=1 Tax=Psychro... 143 6e-33 UniRef50_B3DYX2 Predicted transcriptional regulator contains Xre... 143 7e-33 UniRef50_Q9KAA2 BH2388 protein n=1 Tax=Bacillus halodurans RepID... 143 7e-33 UniRef50_Q5WFW7 Putative uncharacterized protein n=1 Tax=Bacillu... 143 9e-33 UniRef50_A8YN50 Genome sequencing data, contig C328 n=2 Tax=Micr... 142 2e-32 UniRef50_A0YN87 Putative uncharacterized protein n=1 Tax=Lyngbya... 142 2e-32 UniRef50_B8G090 Transcriptional regulator, XRE family n=2 Tax=De... 142 3e-32 UniRef50_B9MFX5 Putative uncharacterized protein n=2 Tax=Comamon... 141 4e-32 UniRef50_D0XIR9 Putative uncharacterized protein n=1 Tax=Brevund... 140 7e-32 UniRef50_A9AVS8 Transcriptional regulator, XRE family n=1 Tax=He... 140 9e-32 UniRef50_A1TM26 Putative uncharacterized protein n=3 Tax=Acidovo... 139 1e-31 UniRef50_Q28R11 Putative uncharacterized protein n=1 Tax=Jannasc... 138 2e-31 UniRef50_Q04E76 Xre-like DNA-binding protein n=2 Tax=Oenococcus ... 138 3e-31 UniRef50_A1BIX7 Helix-turn-helix domain protein n=1 Tax=Chlorobi... 138 4e-31 UniRef50_Q1IKD9 Putative uncharacterized protein n=1 Tax=Candida... 137 5e-31 UniRef50_A3EWJ9 Putative uncharacterized protein n=2 Tax=Leptosp... 137 5e-31 UniRef50_C2HEM1 Possible transcription regulation protein n=16 T... 137 6e-31 UniRef50_Q03R26 Xre-like DNA-binding protein n=4 Tax=Lactobacill... 137 7e-31 UniRef50_Q8EQS0 Hypothetical conserved protein n=1 Tax=Oceanobac... 136 1e-30 UniRef50_C0X144 Transcription regulation protein n=22 Tax=Entero... 135 2e-30 UniRef50_B5YKY2 Putative uncharacterized protein n=1 Tax=Thermod... 135 3e-30 UniRef50_B3ENQ0 Transcriptional regulator, XRE family n=1 Tax=Ch... 134 3e-30 UniRef50_B8HSZ0 Transcriptional regulator, XRE family n=1 Tax=Cy... 134 4e-30 UniRef50_D1C2J1 Helix-turn-helix domain-containing protein n=2 T... 134 5e-30 UniRef50_B4S568 Transcriptional regulator, XRE family n=1 Tax=Pr... 133 7e-30 UniRef50_A1AL47 Transcriptional regulator, putative n=1 Tax=Pelo... 133 8e-30 UniRef50_Q67P24 Putative uncharacterized protein n=1 Tax=Symbiob... 133 1e-29 UniRef50_Q73JG7 Putative uncharacterized protein n=2 Tax=Trepone... 132 1e-29 UniRef50_B4RGC8 Putative transcriptional regulator n=1 Tax=Pheny... 132 1e-29 UniRef50_B7KLL6 Putative uncharacterized protein n=1 Tax=Cyanoth... 132 2e-29 UniRef50_D1Y2L8 Transcriptional regulator, XRE family n=1 Tax=Py... 132 2e-29 UniRef50_A1VNF3 Putative uncharacterized protein n=1 Tax=Polarom... 132 2e-29 UniRef50_C6NWC2 Putative uncharacterized protein n=1 Tax=Acidith... 131 3e-29 UniRef50_Q03YM6 Xre-like DNA-binding protein n=3 Tax=Leuconostoc... 131 4e-29 UniRef50_C1TRT9 Putative uncharacterized protein n=1 Tax=Dethios... 130 5e-29 UniRef50_Q165I9 Putative uncharacterized protein n=18 Tax=Rhodob... 130 6e-29 UniRef50_B4W757 Putative uncharacterized protein n=1 Tax=Brevund... 130 8e-29 UniRef50_D1RE75 Putative uncharacterized protein n=1 Tax=Legione... 129 1e-28 UniRef50_B9YCY9 Putative uncharacterized protein n=1 Tax=Holdema... 129 1e-28 UniRef50_Q5ZV95 DNA-binding protein, putative n=4 Tax=Legionella... 129 1e-28 UniRef50_C4FT96 Putative uncharacterized protein n=1 Tax=Catonel... 129 1e-28 UniRef50_C5V4P9 Putative uncharacterized protein n=1 Tax=Gallion... 128 2e-28 UniRef50_Q7ND38 Glr4398 protein n=1 Tax=Gloeobacter violaceus Re... 128 2e-28 UniRef50_C6KUI1 XRE family transcriptional regulator n=1 Tax=unc... 128 2e-28 UniRef50_Q6MGU1 Putative uncharacterized protein n=1 Tax=Bdellov... 128 2e-28 UniRef50_Q72JG0 Putative uncharacterized protein n=2 Tax=Thermus... 128 2e-28 UniRef50_A1WE17 Putative uncharacterized protein n=1 Tax=Vermine... 128 3e-28 UniRef50_C1SGR3 Putative uncharacterized protein n=1 Tax=Denitro... 128 3e-28 UniRef50_B3QS81 Putative uncharacterized protein n=1 Tax=Chloroh... 128 4e-28 UniRef50_C9RLU8 Putative uncharacterized protein n=1 Tax=Fibroba... 127 4e-28 UniRef50_C2E0V4 Possible transcription regulation protein n=8 Ta... 126 1e-27 UniRef50_C5SFB6 Transcriptional regulator, XRE family n=1 Tax=As... 125 2e-27 UniRef50_Q0F2U3 Transcriptional regulator, XRE family protein n=... 125 2e-27 UniRef50_A9BMV4 Putative uncharacterized protein n=3 Tax=Comamon... 125 2e-27 UniRef50_C9YB08 Putative uncharacterized protein n=1 Tax=Curviba... 125 3e-27 Sequences not found previously or not previously below threshold: >UniRef50_B7LKC2 Cytoskeleton protein rodZ n=62 Tax=Enterobacteriaceae RepID=RODZ_ESCF3 Length = 338 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 301/339 (88%), Positives = 306/339 (90%), Gaps = 3/339 (0%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEATHDQNEALTTG RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF Sbjct: 1 MNTEATHDQNEALTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV Sbjct: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 LFVVIGLSGAWWWQD KAQQEEITTMADQSSAEL++N QS+PL STTT P T P Sbjct: 121 LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNANGTNSQSIPLENSTTTVPEATPAP 180 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVD--TAATPAPTAATTPDGAAPL 238 A VDTTA N QTPA + PAP +PQQNAVV PSQANVD T A AP TTPD A PL Sbjct: 181 AAPVDTTA-NEQTPAASTPAPVTEPQQNAVVPPSQANVDTATTAPAAPATTTTPDTATPL 239 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 PTDQAGVTTP ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI Sbjct: 240 PTDQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 299 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ Sbjct: 300 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 338 >UniRef50_A7MGV6 Cytoskeleton protein rodZ n=51 Tax=Enterobacteriaceae RepID=RODZ_ENTS8 Length = 338 Score = 261 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 232/338 (68%), Positives = 254/338 (75%), Gaps = 1/338 (0%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEATH++N TTG RLR AREQLGLSQQ VAERLCLKVSTVRDIEEDKAPADLASTF Sbjct: 1 MNTEATHEENAPHTTGERLRLAREQLGLSQQVVAERLCLKVSTVRDIEEDKAPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVH+PEEELLP L KQAP+R A+VAPMQ+++LGK RKKRDGWLM+FTWLV Sbjct: 61 LRGYIRSYARLVHVPEEELLPMLAKQAPVRTAQVAPMQTYALGKSRKKRDGWLMSFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPATTST 179 LFVV+GL+GAWWWQ+ KAQQEEI+TMADQSSAELS N+ QSVPLNT T D + Sbjct: 121 LFVVVGLTGAWWWQNHKAQQEEISTMADQSSAELSQNAANSPQSVPLNTDNTADASQDQA 180 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 P + + T + V A P A T T A Sbjct: 181 TPPADLPSGDTQNTASNNPQPTPVPSSNTASQQPVVVPPSQANTDTAAQQNTTQPAQSQL 240 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 T P AD NALVMNFTADCWLEVTDATGKKLFSG+QRKD NLNL+GQAPY+LKIG Sbjct: 241 PVGQASTAPAADANALVMNFTADCWLEVTDATGKKLFSGLQRKDTNLNLSGQAPYRLKIG 300 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 AP+AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS Q Sbjct: 301 APSAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSVTQ 338 >UniRef50_C8Q4J6 Transcriptional regulator, XRE family n=8 Tax=Enterobacteriaceae RepID=C8Q4J6_9ENTR Length = 346 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 214/346 (61%), Positives = 254/346 (73%), Gaps = 14/346 (4%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEAT +++ +TG RLR AREQ+GL+QQ VAERLCLK+STVRDIEEDK+PADLASTF Sbjct: 1 MNTEATQEKSAVHSTGERLRLAREQMGLTQQNVAERLCLKLSTVRDIEEDKSPADLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYARLVH+PE++LLP + KQAP+RAAK+ PMQSFSLGKRRKKRDGWLM FTWLV Sbjct: 61 LRGYIRSYARLVHVPEDDLLPMMAKQAPVRAAKIEPMQSFSLGKRRKKRDGWLMIFTWLV 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQ------SVPLNTSTTTDP 174 +FVVIGL+GAWWWQ+ KA Q+E+ +MADQ+ + S NS+ + + Sbjct: 121 IFVVIGLTGAWWWQNHKASQDELVSMADQNGSNSSDNSQSIPLGDNSSDASADADSNGAG 180 Query: 175 ATTSTPPASVDTTATNTQTPAVTA--------PAPAVDPQQNAVVSPSQANVDTAATPAP 226 +V T + T TPA + PA A NAVVSPSQA VDT PA Sbjct: 181 TPVDNGAGAVATPDSATNTPAQASNAPAATSAPATATQGNDNAVVSPSQAPVDTTPPPAT 240 Query: 227 TAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 + A A LPT AGV+ +DPNALVMNF+ADCWLEVTDA+GKKLFSG+QR G L Sbjct: 241 SPAPANSVAGQLPTGGAGVSQASSDPNALVMNFSADCWLEVTDASGKKLFSGLQRSGGKL 300 Query: 287 NLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +L GQ PY+LKIGAPAAVQ+QYQ +PVDLSRFIR NQVARLT+ A+ Sbjct: 301 SLAGQPPYRLKIGAPAAVQVQYQNQPVDLSRFIRNNQVARLTVGAQ 346 >UniRef50_B1JS04 Cytoskeleton protein rodZ n=32 Tax=Enterobacteriaceae RepID=RODZ_YERPY Length = 368 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 191/368 (51%), Positives = 225/368 (61%), Gaps = 36/368 (9%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTEA+ DQ T G RLR ARE LGL+QQ VAERLCLKVST+RDIEED A A+LASTF Sbjct: 1 MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGYIRSYA+LVH+PE+ELLP LEKQAP+RAAKVAPMQSFSLGK+ KKRDGWLM+FTWL+ Sbjct: 61 HRGYIRSYAKLVHLPEDELLPILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLI 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + VV+GL+GAWWWQ+ +AQQ EI M DQSSA+LS N Q + + S P P Sbjct: 121 VLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQPVPLTDDNSDAIAPTDAPAP 180 Query: 181 PASVDTTA------------------------------------TNTQTPAVTAPAPAVD 204 A+ T P + P Sbjct: 181 VANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTTLVPKTNSTEPVDT 240 Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 N + A + P PLPT AGV+ + ALVMNFTADCW Sbjct: 241 ANTNTTMHQEGAASAAVSPSQVPQLGMPTDQPPLPTADAGVSGSASSVGALVMNFTADCW 300 Query: 265 LEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 L+V DATGK LFSG+Q+ LNL G+APYKL IGAP A+ I YQG PVDLS+FI+ N+V Sbjct: 301 LQVVDATGKTLFSGIQKGGAVLNLAGKAPYKLTIGAPGALTISYQGNPVDLSKFIKANRV 360 Query: 325 ARLTLNAE 332 ARLT+ E Sbjct: 361 ARLTVGVE 368 >UniRef50_D1P3Q8 Putative membrane protein n=3 Tax=Providencia RepID=D1P3Q8_9ENTR Length = 324 Score = 238 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 135/330 (40%), Positives = 184/330 (55%), Gaps = 8/330 (2%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E +Q ++T G L ARE+ GL+Q+ VAERLCLKVSTV++IE+D PA + TF Sbjct: 1 MTIENNTEQT-SITVGQVLSQARERKGLTQEMVAERLCLKVSTVKEIEQDIHPAGVEPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIR YAR+V +PE E+ L+ AP + + V+PMQS+SLGK+RKKR+GWLM TWL+ Sbjct: 60 LRGYIRLYARMVGLPESEISVFLKTDAPAQVSNVSPMQSYSLGKKRKKREGWLMKITWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + ++I + G WWWQD AQ+++ TMA ++ LS Q V P Sbjct: 120 VIILIAMVGIWWWQDHNAQKKDFITMATENDLILSQQDNSSQPVAPTNPAMIAP------ 173 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + + A T + P + + + + V T P + A Sbjct: 174 -LATENGAVQTSSVTGELPVLSDNQETPIAGNADAQAVRTIPLPNAPQTASSVDRAQANA 232 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 P A+ LV+NF+ CWLE+ DA K LFSGM+ L L G PY+L IGA Sbjct: 233 STESTDMPAANTTGLVLNFSGQCWLEIRDANNKVLFSGMKNGGDKLELDGSQPYRLNIGA 292 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 PA V +Q+QGK VDLSRFI+ + A+ TL Sbjct: 293 PANVAVQFQGKDVDLSRFIKAKRSAKFTLP 322 >UniRef50_D2TXC4 DNA-binding protein n=1 Tax=Arsenophonus nasoniae RepID=D2TXC4_9ENTR Length = 342 Score = 236 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 137/342 (40%), Positives = 184/342 (53%), Gaps = 12/342 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN++ ++ E +T G RL ARE LGLS++ VAERLCLKV TVR+IEED + TF Sbjct: 1 MNSKPKTEKTE-ITVGQRLLQARETLGLSREIVAERLCLKVCTVREIEEDSNSHSVDPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGYIRSYA+LV IPE+E+L L+K P +AA V+PMQS+SLGK RKKR+GWLM FTWL+ Sbjct: 60 LRGYIRSYAKLVKIPEKEILELLDKHTPAKAAVVSPMQSYSLGKTRKKREGWLMKFTWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + + I + G WWWQ K Q++EI TMA+Q+ + S T+ + +T Sbjct: 120 IIICIAMVGIWWWQGYKVQKQEIATMAEQNRSNAIQIPSDPPSSTAGTANAIEQNNVNTS 179 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + P + + S NV+T + T P + Sbjct: 180 STETSIPPVTSAIANNVISPAPQSPLTSETLKNSDKNVNTESVNPTEVKTVPLPGSMTNN 239 Query: 241 DQAGVTTPVADPNA-----------LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT 289 + P +VMNF CWLEV DA GK LFSGM+ L L Sbjct: 240 SHPERSRAEETPADTDAASLESDDGIVMNFKGQCWLEVRDAKGKILFSGMKNAGQKLELN 299 Query: 290 GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 G+ PY+ IG PA V + ++G VDL+RFI+ N+ A+ L Sbjct: 300 GEPPYEFNIGIPANVNLLFKGNSVDLNRFIKANRPAKFKLPG 341 >UniRef50_C4UGF5 Uncharacterized HTH-type transcriptional regulator yfgA n=2 Tax=Enterobacteriaceae RepID=C4UGF5_YERRU Length = 302 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 172/315 (54%), Positives = 217/315 (68%), Gaps = 14/315 (4%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 RLR ARE LGL+QQ +AERLCLKVST+RDIEED A A+LASTFLRGYIRSYA+LV +PE+ Sbjct: 2 RLRQAREALGLTQQNIAERLCLKVSTIRDIEEDNAQANLASTFLRGYIRSYAKLVRLPED 61 Query: 78 ELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 ELLP L KQAP+RAAKVAPMQSFSLGK+RKKRDGWLM+FTWL++FVV+GL+GAWWWQ+ + Sbjct: 62 ELLPMLAKQAPIRAAKVAPMQSFSLGKKRKKRDGWLMSFTWLIVFVVLGLTGAWWWQNHQ 121 Query: 138 AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVT 197 AQQ EI MADQSSA+LS + + + + ++ T V Sbjct: 122 AQQAEIANMADQSSAQLSQ--------------SENSSQGAALTDNMTNTEVPLTDSHVA 167 Query: 198 APAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVM 257 A + + +P+ + + + AAPLPT A V+ L M Sbjct: 168 AAPVVTEATPTSTSAPTPTPSEVVSPSQASLPEVSTPAAPLPTADAVVSGTATPAGGLAM 227 Query: 258 NFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSR 317 NF+ DCWL+V DATG+ LFSG+Q+K L+L G+APYKL IGAP AV IQYQG PVDLS+ Sbjct: 228 NFSEDCWLQVIDATGESLFSGIQKKGATLSLAGKAPYKLTIGAPGAVTIQYQGNPVDLSK 287 Query: 318 FIRTNQVARLTLNAE 332 F+++++VARLT+ AE Sbjct: 288 FVKSSRVARLTVGAE 302 >UniRef50_C2LI02 Helix-turn-helix DNA-binding domain protein n=3 Tax=Proteus RepID=C2LI02_PROMI Length = 320 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 123/332 (37%), Positives = 190/332 (57%), Gaps = 12/332 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MNTE ++ + T G LR ARE+ GL+QQ VA+RLCLK++TV +IE D + +A TF Sbjct: 1 MNTENKTEEVKL-TAGQLLRQAREKAGLTQQTVADRLCLKLTTVCEIEADTISSGIAPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGY+RSYA+LV +PE +L +++QAP++ KV Q++SLGKR KKR+GWLM TW++ Sbjct: 60 LRGYMRSYAKLVGVPESAILGLIDQQAPIKQVKVTTTQNYSLGKRHKKREGWLMKLTWVI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + +I L G WWWQ +A Q+E+ +MA + + GQ+ P + T + ++ Sbjct: 120 VIAMIALVGLWWWQGHQADQQELVSMA---------SQDIGQNSPQENTNTIESPLSTLD 170 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 S + N Q PA + V+ + + P P + T + + Sbjct: 171 NNSPSSEGENVQVPASPLVDNQANKVAEPSVTDATPEAEVKTVPLPVSPLTTSTTSRADS 230 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + T N LV+ F +CWLE+ +A K LF+G+++ L G+ PYKLKIGA Sbjct: 231 AEGNSTPAPIVENQLVLMFDGECWLEIRNAQNKVLFNGIKKAGDRLEFNGEQPYKLKIGA 290 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 P+ ++Q+ G+ VDLSRF ++A++T+ + Sbjct: 291 PSVTRLQFNGEAVDLSRFT--GKIAKITVPSA 320 >UniRef50_C6CAL7 Transcriptional regulator, XRE family n=1 Tax=Dickeya dadantii Ech703 RepID=C6CAL7_DICDC Length = 323 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 172/336 (51%), Positives = 214/336 (63%), Gaps = 16/336 (4%) Query: 1 MNTEATHDQNEA--LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 MNTEAT D + +T G RLR AREQLGL+QQ VAERLCLK++TVR+IE++ PA LA Sbjct: 1 MNTEATQDNTASTTVTPGERLRQAREQLGLTQQVVAERLCLKLTTVREIEDNNTPAGLAP 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQA-PLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TFLRGYIRSYA+LVHIPEEELLP LEK P R + VA M +LGK RKKRDGWLM FT Sbjct: 61 TFLRGYIRSYAKLVHIPEEELLPMLEKHVVPSRTSTVAAMPGTALGKTRKKRDGWLMMFT 120 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 WL+L V+GL+ AWWWQ+ +AQQ EI +M + ++A S Sbjct: 121 WLILLGVLGLTVAWWWQNHQAQQREINSMVEHANAPQSGK-------------MVQDTDG 167 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 ++ P VDT N A P +V V + A A+ P + Sbjct: 168 TSDPEPVDTEDNNAGDTASRIPETSVAAAGMPVQPAAGDTSARAVVAPSQASVQPLLSPA 227 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 T A PN+++M F+ADCWLEV DATGKKLFSG+QR G LNL GQ PY+LK Sbjct: 228 AVAPATATATDAAAPNSVIMRFSADCWLEVVDATGKKLFSGVQRSGGVLNLVGQPPYRLK 287 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 IGAP AVQ+++QGKPVDLSRF++++QVAR+TL+ +Q Sbjct: 288 IGAPGAVQVEFQGKPVDLSRFVKSHQVARITLSEQQ 323 >UniRef50_B2Q0X0 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0X0_PROST Length = 314 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 137/330 (41%), Positives = 190/330 (57%), Gaps = 18/330 (5%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + +Q +T G L ARE++GL+Q++VAERLCLKVSTVR+I+ED PA + TF Sbjct: 1 MTIDNNTEQTP-ITVGKLLSQARERMGLTQESVAERLCLKVSTVREIDEDVKPAGVEPTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 LRGY+R YAR+V++PE EL L+ P+ A+ V+ MQS+SLGK+RKKR+GWLM TWL+ Sbjct: 60 LRGYMRLYARMVNVPESELNALLKNDEPIAASTVSSMQSYSLGKKRKKREGWLMKLTWLI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + V+I + G WWWQD + QQ E TMA+Q+ +S +E G V L+ +T P TS Sbjct: 120 VIVLIAMVGIWWWQDHQKQQNEFVTMANQNDLLISQQNESGNPVELSNGSTETPTNTSET 179 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A + ++ P P + T + Sbjct: 180 GEGTLVDL----------------NAAQATENQPIESLPVKTVPLPNSPNTTVSVDRTQS 223 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + V TPV +AL M+F CWLEV DA K L+SG++ L+L G+ PY+L IGA Sbjct: 224 TEEPVATPVV-QDALTMSFKGSCWLEVRDANNKVLYSGIKNSGDTLDLQGKLPYRLNIGA 282 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 PA V I++ G VDLSRFI+ N+ A+L + Sbjct: 283 PANVDIKFNGNVVDLSRFIKANRSAKLKIP 312 >UniRef50_Q1ZRE7 Hypothetical DNA-binding protein n=4 Tax=Photobacterium RepID=Q1ZRE7_PHOAS Length = 338 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 163/340 (47%), Gaps = 11/340 (3%) Query: 1 MNTEATHDQNEALT---TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNTE +Q G LR AREQLG SQ+ +A RL L++S + +IE ++ Sbjct: 1 MNTENNEEQKITEGTQLPGDVLRQAREQLGYSQKDIANRLRLRLSVIDNIENNRFDQAQL 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +TF RGY+RSYA+ V + EE +L L+K K MQSFS +R+ D +M T Sbjct: 61 ATFTRGYVRSYAKYVGLEEEAVLVLLDKC-GHTKPKAQEMQSFSRRTKREAHDSRIMGLT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W++ V +G++ WWWQ+ +Q + T EQG + T+ D A+ Sbjct: 120 WILAAVFVGVTAVWWWQNIHLEQAPVATTTTADQTVAHEKQEQGSDDTIVTTLNGDDASI 179 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 S + T + P T A + S + T + A Sbjct: 180 SATQPTTVDTDVDHSAPISTEQNTAASTTSADAATDSSPTTASTTATGTTTEASTTPAEN 239 Query: 238 LP------TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 T A L + F+ADCW++V DATGK+L SG+++ L+L G+ Sbjct: 240 AETASTSVTTATATPVVDATAPQLQLKFSADCWIDVRDATGKRLESGIKKAGQVLDLEGK 299 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 AP+++++GAP+AV+I +G+P DLSR+ ++ L L Sbjct: 300 APFRVRLGAPSAVKINIKGQPFDLSRY-PASKPVTLKLPQ 338 >UniRef50_C4LC36 Transcriptional regulator, XRE family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LC36_TOLAT Length = 343 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 105/342 (30%), Positives = 154/342 (45%), Gaps = 14/342 (4%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M TE H+ + T G L+ AREQ GLSQQ VA RL L++S +RDIEED+ ASTF Sbjct: 1 MTTEQRHETAQL-TPGTILKTAREQRGLSQQDVAHRLNLRISLIRDIEEDRFDQKTASTF 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+++YAR V EE ++ + L K + M SFS +R+ + + +W++ Sbjct: 60 TRGYLKTYARFVGANEEAVVAAYDG-LGLDDKKYSEMYSFSGRTQREASEHRVRLISWVL 118 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +IGL G WWW + + + N P++++T+ + P Sbjct: 119 CIGLIGLGGTWWWLQPTEEPVPTSINEAGQLVVKAVNEAALAVNPVSSATSVATESLPVP 178 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAP------------TA 228 +++ PA A D + A + VD A Sbjct: 179 TIPDVMNTSSSAVPASADVAEENDTEGQAPTVLTDTAVDAEAQEQSAVVPAPMVAAVAAT 238 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 + A V AL + F CWL VTDATGK + G + ++L Sbjct: 239 SAAASTAVSTAASTEETAVAVDPSVALQLQFKETCWLRVTDATGKSILEGTKNAGDKISL 298 Query: 289 TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G+ P+ L IGAP AV I + G+ VD+S +IR VAR L Sbjct: 299 SGKEPFSLTIGAPRAVSIYFHGQEVDMSSYIRQGVVARYKLP 340 >UniRef50_Q6LU50 Hypothetical DNA-binding protein n=1 Tax=Photobacterium profundum RepID=Q6LU50_PHOPR Length = 311 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 7/315 (2%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 LR ARE+LG SQ+ +A RL LK+S + +IE++ +TF RGY+ SYA+ V + E+ Sbjct: 1 MLRQAREKLGYSQKDIASRLRLKLSVINNIEDNIFEESQVATFTRGYVCSYAKYVGLNEK 60 Query: 78 ELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 E+L L+ K MQSFS +R+ D +M TW V ++IGL+ AWWWQ Sbjct: 61 EILAKLD-LLGHAQPKEQTMQSFSRRTKREAHDSRIMGITWGVAAIIIGLTAAWWWQS-- 117 Query: 138 AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVT 197 +Q E T S+ELS ++ + + T + S A+ + T P Sbjct: 118 -EQLESGTDLSTVSSELSQPLDESIANSDLSDPTITGISASDINAAAEGTVVTASEPETV 176 Query: 198 APAPAVDPQQNAVVSPSQANVDTAATPA--PTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 A +AV + + A + + A+ + ++ A T A + L Sbjct: 177 LSATNDSDLISAVDDEVSISNPSTVINAGSDNDSFVAEQASDVISESAESTEDGAIVSDL 236 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 ++F DCW++V DA GK+L +G+++ LNL G AP+K+ +GAP V++ Y+G+PVDL Sbjct: 237 KLSFAGDCWIDVRDANGKRLDTGIKKTGDVLNLNGAAPFKVVLGAPGVVEMTYKGEPVDL 296 Query: 316 SRFIRTNQVARLTLN 330 S + +VAR L Sbjct: 297 SVY-PAGKVARFKLP 310 >UniRef50_A0KJ43 Putative uncharacterized protein n=2 Tax=Aeromonas RepID=A0KJ43_AERHH Length = 312 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 118/335 (35%), Positives = 165/335 (49%), Gaps = 26/335 (7%) Query: 1 MNTEAT---HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M TE D ++A+ G LRNAREQLG +++ VA R+ L+++ + IE D + Sbjct: 1 MTTEQPHDFQDDSQAVGPGQLLRNAREQLGWTREQVASRIHLRLTLIAAIESDTYDKHTS 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TF+RGY+R+YA+LV IPEE +L +K L MQSFS R++ D L T Sbjct: 61 HTFIRGYLRTYAKLVGIPEETILAAYDK-LGLTPPDNIDMQSFSRRSRQQANDSRLKVVT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 WLV+ V+I LS AWWWQ + S +++ T + Sbjct: 120 WLVILVLIALSVAWWWQS------------------TARRSAGDEALAATEMGATSNTPS 161 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 +T P +VD A A + DP +A + + +A T A A Sbjct: 162 ATVPPAVDVADPVVAPATSAAAATSADPVVSAAATTLPVDASSAVA---TTAVATSAATA 218 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 + A L M+FTADCWL+V DA GK LFSG+++ + L L G P K Sbjct: 219 TQPAADTAASEPAKVPQLKMSFTADCWLDVKDAKGKTLFSGLKKANDELVLEGPEPLKFI 278 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 IGAP AV I+YQGK +D+SR+ + ARL+L E Sbjct: 279 IGAPMAVNIEYQGKSIDMSRY-NNGRTARLSLPQE 312 >UniRef50_C9NQN4 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NQN4_9VIBR Length = 330 Score = 215 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 96/332 (28%), Positives = 157/332 (47%), Gaps = 4/332 (1%) Query: 1 MNTEATH--DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 M+ E + + G L+ RE+LGL+QQ VA+RL L+ S + +IE ++ ++ + Sbjct: 1 MSVEQQTPVQEENKVEAGTILKQKREELGLTQQQVADRLRLRRSIIENIELNQFESEQVA 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 TF RGY+RSYAR+V I E +L L+ + MQSFS ++K D +MT TW Sbjct: 61 TFTRGYLRSYARVVGIKESVVLCALD-DCGEAQHEEHEMQSFSQKTNKEKHDSRIMTLTW 119 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 + +++G+S WWWQ+++ E+TT +Q +E + + + Sbjct: 120 GIFAIIVGISSVWWWQNQENSAVELTTATEQEMKIEQELAENDELDFAAVEPSLINESPE 179 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 T P + Q VV + P Sbjct: 180 GQQVVEQPLEEVTTPVETATAEPEIVEQPTEVVQAITEPAEPEVVTEPVTEPVVAAEPNQ 239 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 P + ++ N L M+F+ DCW++V DATGK L +G+++ +L ++G+ PY + + Sbjct: 240 PEKETENSSEPVVANLLEMSFSDDCWIQVKDATGKTLATGIKKAGQDLQVSGERPYNVIL 299 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 GAP V + +PVDLS + + +VAR TL Sbjct: 300 GAPENVSMTLSSEPVDLSGYT-SGKVARFTLP 330 >UniRef50_A6AQ33 Integral membrane protein n=14 Tax=Vibrionales RepID=A6AQ33_VIBHA Length = 318 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 17/332 (5%) Query: 1 MNT-EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M E T++ ++ G L+N RE LG++Q+ VA+RL L+VS + DIE ++ +T Sbjct: 1 MTEHENTNEVPLSMEAGTLLKNKRESLGMTQKHVADRLRLRVSVIEDIENNRFEEQQVTT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLR-AAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 F RGY+RSYA+LV + E+ +L LE+ + + + MQSFS + +K + +M TW Sbjct: 61 FTRGYLRSYAKLVGLDEKIVLAALEQTSEVHVKPQETEMQSFSRKTKHEKHNSRIMLLTW 120 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 + V+ G+SGAWWWQ+++ S A+LS+ + + + V + A Sbjct: 121 AIAIVITGISGAWWWQNQQEN----------SLAQLSAETAETEQVADDADIDQMSADEL 170 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 + + V+ + + A V A P A A Sbjct: 171 IASTPAEIAPASAALTVVSEADTTMSAAGDVTEPVVAAEVTEEAAQEPVAVIEDAQEAEE 230 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 P L M F ADCW++V DA GK L SG ++ ++ L G+AP+K+ + Sbjct: 231 P----AAPVVPEGMTLLTMKFKADCWIQVKDANGKTLVSGTRKPGQDVELAGKAPFKVIL 286 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 GAP V + + +PVDLS + + +VAR TL Sbjct: 287 GAPEGVTMTFASEPVDLSGYT-SGKVARFTLP 317 >UniRef50_B8K783 Integral membrane protein n=4 Tax=Vibrio RepID=B8K783_VIBPA Length = 314 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 106/327 (32%), Positives = 163/327 (49%), Gaps = 20/327 (6%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 A A+ G L+ REQLGLSQ+ +A+RL L+VS + IE ++ DL +TF +G Sbjct: 8 TAPEQTQSAVEAGTLLKQKREQLGLSQKQIADRLRLRVSIIESIESNQFTTDLVATFTKG 67 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+RSYA+ V + E E+L + + + PMQSFS +R+K D +M TW +L V Sbjct: 68 YLRSYAKAVGLDESEVLAAYAQHNKVETEE-QPMQSFSRQTKREKHDSRIMIITWGILLV 126 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 ++G+S WWWQ++++ ++T + E L + T+ + P Sbjct: 127 IVGISSVWWWQNQQSSIVDLT---------EVTEQELELEQQLENAQMTELPASIIPEVD 177 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 +T + P + P V P+ VDTA A TP + Sbjct: 178 HETELNVAEEPNLQEPVAEV---------PASETVDTAQETAQQEQVTPAEEIAEVAEPV 228 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 + P N LVM F DCW++V D +GK + +G+++ L L+G+ PYKL +GAP Sbjct: 229 EESVPQVAANLLVMTFEGDCWIQVKDKSGKTVSTGVKKAGETLELSGELPYKLVLGAPEN 288 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLN 330 V + +PVDLS + + +VAR TL Sbjct: 289 VSMTLASEPVDLSGYT-SGKVARFTLP 314 >UniRef50_C9P6C4 Putative uncharacterized protein n=2 Tax=Vibrio RepID=C9P6C4_VIBME Length = 303 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 157/333 (47%), Gaps = 33/333 (9%) Query: 1 MNTEAT---HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT+ + G L+ RE LGLSQ+ VA+RL L+V+ +R+IE+++ +DL Sbjct: 1 MNTQQETIVEETPNVQQPGTLLKQKRETLGLSQKQVADRLRLRVAIIRNIEDNQFDSDLV 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +TF RGY+RSYA+ V + E++ E + + MQSFS +R + D +M T Sbjct: 61 ATFTRGYLRSYAKAVGLSVAEVVESYEVHY-VTGPQEQRMQSFSRKNKRAQHDSRIMLIT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W+++ V+IG+S WWWQ+ + ++ E ++ L+ T T Sbjct: 120 WVIVLVIIGMSSLWWWQNNQHNNLTSSSERSSLITEQTNPQSASADPILDQLPTVSDLTV 179 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 ++V+ + P ++ + + Sbjct: 180 GNEVSAVEQAEEEESPVNDSRVEPILEAEPSIT--------------------------- 212 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 P + N L M F+ADCW++V DATGK L +G+++ ++N+ G+ P + Sbjct: 213 -PATTENTPVNADESNLLSMTFSADCWIQVKDATGKTLSTGVKKAGQSINVRGETPISVI 271 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +GAP V + + +PVDLS + + +VAR TL Sbjct: 272 LGAPEGVSVTFASEPVDLSGYT-SGRVARFTLP 303 >UniRef50_Q5E773 Integral membrane protein n=3 Tax=Aliivibrio RepID=Q5E773_VIBF1 Length = 304 Score = 212 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 105/332 (31%), Positives = 166/332 (50%), Gaps = 29/332 (8%) Query: 1 MNTEATHDQNEA-LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M TE + E + G L+ AR++L L+ + ++ RL L+V + IE D+ +T Sbjct: 1 MTTEHIEETVETFIAPGLLLKEARKELNLTLEDISSRLRLRVEVLEQIEADQFDMGKLAT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F RGY RSYA++V++PE+++L L+ Q + MQSFS +R K D +M TW+ Sbjct: 61 FTRGYYRSYAKVVNVPEQKVLDALD-QLGKAQIEQHDMQSFSRKTKRDKHDNRIMKLTWV 119 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 + +++G+S WWWQ E + + AEL + E +S+ TD T Sbjct: 120 IFALILGMSVLWWWQ-------EQAQLESANDAELIAEVETAKSMEQVEENKTDAPQTEE 172 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 ++D ++ + + S+A V+ Sbjct: 173 TAPTLDEAEMLQLDTNISELETDSKTLEKETIKESEAPVEIK------------------ 214 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 + V +VM F++DCWL+V DA+ +L+SG+++ + L LTG+APYKL IG Sbjct: 215 -KEEPVAEKAVVTEDVVMTFSSDCWLQVQDASNNRLYSGVKKSNQTLKLTGKAPYKLVIG 273 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 AP+AV + Y+GKPVDLS + +VARLTL Sbjct: 274 APSAVTLTYKGKPVDLSVY-PAGKVARLTLPQ 304 >UniRef50_D0I7P6 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7P6_VIBHO Length = 307 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 8/312 (2%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE +GLS Q VA+RL L+VS ++D+EE+ + +TF RGYIRSY++LV + +E Sbjct: 3 LREAREAIGLSDQDVADRLRLRVSVIQDLEENCCDDEKVTTFTRGYIRSYSKLVGLNADE 62 Query: 79 LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 LL + + MQSFS RR + D +M TW++L +VIGL+ WWWQ+ Sbjct: 63 LLSTFNPVTDVEDSTQK-MQSFSRKTRRDQHDSRVMGLTWVILAIVIGLTAFWWWQN--Q 119 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 Q + + ++ + S +SS +E + + T + +T P V Sbjct: 120 QNDLLLSLPESSGLSMSSTTEAAPATEAAPAVAKTDDDTRQSASVAKSTDAPASAPDVMT 179 Query: 199 PAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMN 258 P +N + D A + TPV + + ++ Sbjct: 180 REPTDTLVEN----TAPDVTDAEPVAAEQVDVIEPPQPEAAVVEDVAVTPVTASSNMTLS 235 Query: 259 FTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318 F+ DCW+++ DA+GK+L +G++ + L+G AP+ L +GAP AV + Y G+ VDLS + Sbjct: 236 FSGDCWVDIRDASGKRLLTGIKSSGETVELSGDAPFSLVLGAPTAVNLVYNGEQVDLSGY 295 Query: 319 IRTNQVARLTLN 330 + +VARL+L Sbjct: 296 -PSGRVARLSLP 306 >UniRef50_B8CKR0 DNA-binding protein, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKR0_SHEPW Length = 336 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 7/324 (2%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 LT G L+ ARE G S + +A +L L+ + +R+IE D A+T++RGY+++Y Sbjct: 18 DEPTLTLGVLLKKARENKGASVEDIAAQLHLRPAIIREIEADNLLEIGAATYVRGYVKNY 77 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 AR V E+ L+KQ + MQSFS + RDG LM T++++FV++ L Sbjct: 78 ARAVQADPFEVQTCLDKQLLND--EQPSMQSFSRKTTHQARDGRLMALTYIIVFVLLALM 135 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 WW+Q + + S+ +N+ + + P Sbjct: 136 VLWWFQKSSMETTVDYSQPTVEEVAASAEEAMYDESLINSEAALAAQSNNIPLDERIVET 195 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 + + Q+ A+ +AA + Sbjct: 196 IGDDVADNNSTEQYIASNQDVTSEEQPELQVAEASSQVSAAQLLASMVDSQDNDTS---- 251 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 A +AL++ + DCW++VTDA G L G+++ ++N+TG P+ + +GAP V IQ Sbjct: 252 DAVTSALMLTLSGDCWIKVTDANGNTLIDGLKKSGRDINVTGAEPFAVILGAPQVVNIQL 311 Query: 309 QGKPVDLSRFIRTNQVARLTLNAE 332 G V L ++ + +VAR +L Sbjct: 312 NGTQVSLDQY-PSGKVARFSLPLA 334 >UniRef50_B0TLI3 Putative uncharacterized protein n=2 Tax=Shewanella RepID=B0TLI3_SHEHH Length = 327 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 99/341 (29%), Positives = 160/341 (46%), Gaps = 25/341 (7%) Query: 1 MNTEATHD---------QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK 51 M E + LT G L+ ARE GLS +A+A +L L+ + +++IE D Sbjct: 1 MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADN 60 Query: 52 APADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG 111 A A+T++RGY+++YAR V + L+KQ + + MQSFS + RDG Sbjct: 61 LQAVGAATYVRGYVKNYARAVQADPFTVQECLDKQL--ESEEKPSMQSFSRKTTHQARDG 118 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 LM T++++FV++GL WW+Q ++M + E S + + Sbjct: 119 RLMALTYIIVFVLLGLMVLWWFQK--------SSMDSAVDYSQPTAEEVAASAEVGLANP 170 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 D + V+ A++++ PA +A + A D A SQ AAT A A Sbjct: 171 IDALLVDNSDSGVEQMASSSEEPAESAVSTAQDAPTAASNEQSQTTQSPAATQATEPAQI 230 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 A + V + L ++ T DCW++VTD G L S +++ +NL G Sbjct: 231 EPNAQASAESEDKVL-----GSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGA 285 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 P+ + +GAP V IQ GK + L ++ + +VA++TL Sbjct: 286 EPFSVTLGAPQVVNIQLNGKSISLDQY-PSGKVAKMTLPHA 325 >UniRef50_C6XEI7 Putative uncharacterized protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEI7_METSD Length = 336 Score = 203 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 89/328 (27%), Positives = 133/328 (40%), Gaps = 4/328 (1%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 A+ + A + GA LR AREQ GLS + RL + + +E D T R Sbjct: 13 EAASTVSSHASSIGAILRAAREQKGLSVIDIHARLRISERQIHALETDDFSLLPEPTIAR 72 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G+IR+YA+ + I E LL Q P K + S ++ + + W VL Sbjct: 73 GFIRNYAKFLEIDAEPLLAAYRAQMPSEEQKNISIPSANIPITQSRTTDWKKYIYASVLV 132 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 ++ G W D SS+E+S + + + A T P Sbjct: 133 LLGA--GVWLLYDENLIPGIPDLHLGSSSSEVSPAQGESLPQAALPAAERESAATQAPAQ 190 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 QT APA +PQ + A P AT +AP T+ Sbjct: 191 GEALALPPEQTSDQAGAAPAAEPQAAPAAAVPATPSAIAPAVQPLPATPAATSAPASTNA 250 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 T+ VA + + + FT D W+ + D GK++F+ +R + G+ P K+ IG A Sbjct: 251 DSTTSSVA-LHKVRLVFTEDSWVSIVDRHGKEIFNKTKRAGSEDAVEGEPPLKVTIGNAA 309 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Q+ Y KPVD + + R N V R+TL Sbjct: 310 GSQLIYDDKPVDTAPYNRLN-VVRITLE 336 >UniRef50_A1S864 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S864_SHEAM Length = 340 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 13/340 (3%) Query: 1 MNTE-----ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 MN E + + G L+ ARE G+S VA L L+ S V+D+E D Sbjct: 1 MNEELTPSSEEQEAPATESLGQILKAAREAKGMSVADVATALHLRPSVVKDLEADDFSNI 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 ++T++RGYI+++AR+V ++++ L Q P + MQSFS R+ RD + Sbjct: 61 SSATYIRGYIKNFARIVEADKQKVEACLASQVPGVSQ--PAMQSFSRKTVRQARDKRYLM 118 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSN-----SEQGQSVPLNTST 170 T+LV+ +++ L WW Q K + ++ E+++ + N + Sbjct: 119 LTYLVILILVALLVFWWLQTSKFFNTAAVDFSKPTAEEVAAAGQTSIQDDLMQRLGNETH 178 Query: 171 TTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT 230 T + + + N+ V A V + + Sbjct: 179 TQAGTSPQPDTEAAYEQSVNSDDMPVAAQEVTVGSAEEPSAQQDNNSAVDTTASDMREID 238 Query: 231 TPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 T A + +ALVM+F+ADCW++V DATGK L S +++ +NL+G Sbjct: 239 TRASNAEATPEVTASIPATPGQSALVMSFSADCWVQVKDATGKVLVSDLRKAGQTINLSG 298 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +AP+ +GAP AV++ G+ L F +VAR +L Sbjct: 299 KAPFSFILGAPQAVKLSINGEAASLDEF-PKGRVARFSLP 337 >UniRef50_C6MCA6 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCA6_9PROT Length = 408 Score = 198 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 121/320 (37%), Gaps = 27/320 (8%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 + G LR AR + +S + V+ +L L + + IE + TFLRG+IR+YA L Sbjct: 115 VQSVGHLLRRARVRKNMSIEDVSRQLRLSIQQIEAIENEDFEKLPGKTFLRGFIRNYANL 174 Query: 72 VHIPEEELLPGLEKQAPLRAA-KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 V + +LL L + + + + P ++ L + + + V+ ++ L Sbjct: 175 VQLNPMQLLQLLPESTRIISTYERTPFRNKQLSFSSSRENSGNNSLVIAVILAIMVLGTY 234 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + +++ ++ + ++ S + +P++T+ Sbjct: 235 FIFENNGWNKDSNISSVGSAAQSESGTTSMEIRLPMSTAADNT----------------- 277 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 V P N + P +A + A A A + Sbjct: 278 -----VNLPIMLSVAPTNTLNDPGKAVAELNAKTELIPAEENIIAQSNELQNEKSS---- 328 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 D L F AD W++V DA G LF + + + G+ P + IG + V + Y Sbjct: 329 DSGNLYFKFIADSWVKVVDAKGVALFEQLMKGGSEQIVVGKRPLSIVIGNASGVNLTYND 388 Query: 311 KPVDLSRFIRTNQVARLTLN 330 K +++S + + + AR L Sbjct: 389 KEINISSYKKQDGTARFILE 408 >UniRef50_B1KKJ1 Putative uncharacterized protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKJ1_SHEWM Length = 340 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 5/332 (1%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 ++ T D +E +T G+ L+ ARE+ G S +A +L L+ V DIE D ++ ++ Sbjct: 14 DSNETPDISEQMTLGSLLKAAREEQGASIGDIAGQLHLRPCIVEDIEADNFGDIASAIYV 73 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 +GY+++YAR+V + + L+ Q P A MQSFS R+ RDG LM T+L+ Sbjct: 74 KGYVKNYARIVQADAQAIQACLDIQLP--KASAPEMQSFSRKTTRQARDGRLMFVTYLIA 131 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 F+++ L WW Q Q + S + + D S+ Sbjct: 132 FILLALLVLWWVQKSDTQASVDFSKPTMEEMAESIQEPFSTKALPDPTLERDSGIESSGI 191 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 S DT + + + + D + + + + D A T T + + D Sbjct: 192 ESSDTGLSINNSAINSGVVHSNDIDDLSPETVNVESSDLATTVVSTEQLPVSVQSEIVQD 251 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 V + A + L ++ ADCW+ V DA GK L + +++ L + G+ P+KL +GAP Sbjct: 252 LPSVDSLGA--SRLSLSLVADCWINVKDADGKVLINDLKKAGSLLEVKGREPFKLTLGAP 309 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 AV I+ + + L+ + +VAR +L + Sbjct: 310 QAVTIKLNEESISLADYA-NGRVARFSLPFAE 340 >UniRef50_Q085U7 Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085U7_SHEFN Length = 325 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 89/338 (26%), Positives = 140/338 (41%), Gaps = 24/338 (7%) Query: 1 MNTEATHDQ--------NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA 52 M E +Q + +T GA L+ ARE GLS + VA +L L+ + D+E D Sbjct: 1 MTKEFEVEQDAEKAPLLKDVVTAGAILKAAREAKGLSLETVATQLHLRPKIINDLENDIF 60 Query: 53 PADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW 112 ++T++RGYI++YAR+V+ ++ L Q P A MQSFS + R+ Sbjct: 61 VNIASTTYVRGYIKNYARVVNADINQIQQCLSHQLPEIVA--PAMQSFSRKTTHQARNSR 118 Query: 113 LMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT 172 L T+L++ V+I + WW Q + SN + Q + + S + Sbjct: 119 LNLVTYLIVAVLIAMLVLWWVQKSSLLTNIDLSQPTVEEIAAESNMPEPQQIIRSGSVQS 178 Query: 173 DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 V+A A A Q D A A++ Sbjct: 179 SGNGLDNE-------------GNVSATDVANQAAIEAEDKLIQTAQDAATASQSLPASSV 225 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 + + + T+ + L + T DCW+ VTDA GK + G++ + + G Sbjct: 226 VESTNIVSSSTADTSLAGAESVLTIELTGDCWVNVTDANGKVMVDGVKNAAQRIEVRGIK 285 Query: 293 PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P+K+ +GAP I G V L+ F +VARLTL Sbjct: 286 PFKVILGAPQVASISLDGNNVSLAEFA-NGRVARLTLP 322 >UniRef50_Q12PT5 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12PT5_SHEDO Length = 364 Score = 195 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 30/356 (8%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 TE ++ T GA LR ARE GLS Q VA +L L+ S + DIE DK A ++T++ Sbjct: 10 TTEQVDPSSDITTVGAVLRKARESKGLSIQEVALQLHLRPSVIVDIENDKFDAMSSATYV 69 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RGY+++YAR V E + L +Q P A MQSFS ++ RD L+ FT++++ Sbjct: 70 RGYVKNYARFVAADIELIKTCLTQQLPQEAP--PSMQSFSRKTTKQARDKRLLIFTYIIV 127 Query: 122 FVVIGLSGAWWWQ---------DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT 172 ++ L WW Q + EE+ + + E S++ +P T+ Sbjct: 128 STLLALLVLWWVQKSTLLSDVDVSQPSMEEVAATEQEHALEAFEISQRALPLPDLPLVTS 187 Query: 173 DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT- 231 D + + V+ A + TA + +N ++ + T Sbjct: 188 DADSVTESGTEVNKGAESDLDTNTTALSGGTVTTENPLIQGQSLESVMPEAGIASLPATG 247 Query: 232 -----------------PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKK 274 + + +A+ + L + T D W++V D+TGK Sbjct: 248 NTALVENSVSNSVSNNEAQAKPLISDVEQSSVASLAEGDRLSVELTGDSWMKVVDSTGKV 307 Query: 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 L G++ + ++G+AP+ L +GAP V + + G+ VDLS+++ +VAR T+ Sbjct: 308 LIDGVKTPGRTIAVSGKAPFSLILGAPKFVSLSFNGEQVDLSQYL-DGRVARFTIP 362 >UniRef50_Q1QTK9 Transcriptional regulator, XRE family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTK9_CHRSD Length = 351 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 22/351 (6%) Query: 1 MNTEATHDQNEALT-----TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 M+ A T G +LR RE+ GLS + VAE+L L+ + V+ +EED+ Sbjct: 1 MSDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQV 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 +T+ RGY+R+YA+L+ + ++ + + ++ + + W+ Sbjct: 61 PIATYRRGYLRAYAKLLGVDDKRVAQAYDALHGRDDLDRTVTPAY-RSQPPSRLGAWVFK 119 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQE----EITTMADQSSAELSSNSEQGQSVPLNTSTT 171 L++ + + WWQ R+ + + +++ +++ + E G + S T Sbjct: 120 LVTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQDGDVTQEDGGDASVTESAT 179 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQN----------AVVSPSQANVDTA 221 D + + AS D + P + VD A A D A Sbjct: 180 GDAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGA 239 Query: 222 ATPAPTAATTPDGAAPLPTDQAG--VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGM 279 + A ATT + P TD A ADPN L + F W E+ DA ++L +G+ Sbjct: 240 SPEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGL 299 Query: 280 QRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Q + G P++L +G V+I Y+ VDLS +N VAR TL Sbjct: 300 QDAGTQAQVEGTPPFRLTVGNATGVEISYRDDNVDLSEHTGSNNVARFTLG 350 >UniRef50_B4RV90 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RV90_ALTMD Length = 350 Score = 193 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 15/343 (4%) Query: 2 NTEATHDQNE-ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 N E T Q E + GA L+ RE LGLSQQ +A++L LK + D+E D + TF Sbjct: 8 NQEVTSQQQENTPSPGAMLKARRETLGLSQQDIADKLFLKSFQINDLESDVIDERSSVTF 67 Query: 61 LRGYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 +GY+R+YA+ + + E++ E+ +QSFS ++ D M T++ Sbjct: 68 TKGYVRNYAKQLGMNSHEVIEAFERFHNQTSVPSSEKLQSFSKRVAKQTHDDRWMMVTYI 127 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQ-----SSAELSSNSEQGQSVPLNTSTTTDP 174 +L ++I WW+Q + + + ++ +SS S ++D Sbjct: 128 ILLLIIAGVVVWWYQQPNDESVAELPLTEAVKRETANTPISSTERGTSSSQAEKRISSDN 187 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 + DT + + + PQ + N + P T + + Sbjct: 188 TASQASTLGNDTLTSRSAEVGESQSGEDTGPQDDDFAQDGSLNDGAISAPDTTVDDSNNL 247 Query: 235 AAPLPTDQAG-------VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN 287 A + D T A P ++ F DCW+ + DA+G+ + G+++K + Sbjct: 248 TALVSGDNEVQQSSLKINTQSSAAPISMTFTFDDDCWVNIKDASGEAIAYGVKQKGRVME 307 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + G P ++ +GAP V+I G+ VD+S + + + AR L Sbjct: 308 IQGVPPVEVTLGAPDNVRISVNGESVDISSY-QNGKTARFALP 349 >UniRef50_C9R6E7 Putative uncharacterized protein n=2 Tax=Pasteurellaceae RepID=C9R6E7_AGGAD Length = 351 Score = 193 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 71/350 (20%), Positives = 130/350 (37%), Gaps = 24/350 (6%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA--PADLAST 59 +E + T G + R ARE L L+ + V++ + L+ + VR IE ++ A T Sbjct: 6 TSETQSRNEQQTTLGDKFRLAREALNLTPEQVSKEISLRPALVRLIENNQFTNETIPA-T 64 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F+RGY+RSYA+ + IP+ E + + + ++ + + W+ + L Sbjct: 65 FMRGYVRSYAKFLRIPDSEWMNVIHFGNEQKNDLGKNARATRSVNQYSSHNNWIGYLSAL 124 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 V+ +V+G++G WWW+ + E + + + +E + + Sbjct: 125 VILIVVGMTGMWWWESHQQSNAERDVLVNSYTPSAPVTTEVNTAPAKPAGNEIPVPQPTA 184 Query: 180 ------------------PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTA 221 + T T A A V+ P + + Sbjct: 185 KIENTLTDTAPKGTGIEIETKPLTETPVAANTTAPVAQESNAPIASANVLQPKMNKIGSN 244 Query: 222 ATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQR 281 + A P + + V + L + +CW+ V D K L + Sbjct: 245 EQLTSVQPESQASAEPQSAVENSSVSAVTTKDNLYIEVIGNCWISVKDKNRKVLAQKEYK 304 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + L+ + PY L IGAP V+I Y+G+ L +VA+ L Sbjct: 305 QGDVLSFNEEEPYSLIIGAPGNVRITYKGQAFPL---TVDGRVAKFKLPQ 351 >UniRef50_A3QCG1 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QCG1_SHELP Length = 336 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 7/330 (2%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 +A + T G L+ ARE ++ +VAE+L L+ S V+D+E D ++T+++ Sbjct: 11 DDAEKPKEAGETLGQWLKAARESRQMTLASVAEQLNLRPSIVQDLEADNYDNIASATYVK 70 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 GY+++YAR++ + ++ L + P+ +A MQSFS R+ RDG LM T+L++F Sbjct: 71 GYVKNYARILGLEMAKVDAYLAESFPVVSAPT--MQSFSRKTTRQARDGRLMLVTYLIIF 128 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 V++ L WW Q + + + + DP + Sbjct: 129 VLLALLVLWWVQKSAM----VADLDLSKPSVEETAELSTLPASSEPMLAQDPQAGTGIEM 184 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + A + P + + + + D A T T Q Sbjct: 185 PREQAAPDQTVSDQAVPDQTMAEESTSAQLTGEQAEDLAPEAGSTPETGVALEVTNQNSQ 244 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 A AD L ++ + DCW++VTDA GK L +G++ +N+ GQAP+K+ +GAP Sbjct: 245 ADEALKSADDAVLALSLSGDCWIKVTDADGKVLVNGLKLAGKEMNVFGQAPFKVILGAPQ 304 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 ++ ++ G+ VDL+++ + +VARLT+ + Sbjct: 305 SLTMRLNGEQVDLAKY-PSGRVARLTVGSA 333 >UniRef50_C6AJL0 Putative uncharacterized protein n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AJL0_AGGAN Length = 341 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 142/345 (41%), Gaps = 18/345 (5%) Query: 1 MNTEATHDQNEA----LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA--PA 54 MNT+ T + + + G + R ARE L L+ + V++ + L+ + +R IE ++ Sbjct: 1 MNTQTTSQEPQTNTRETSLGDKFRQAREALNLTVEQVSKEISLRPAVLRSIENNQFISDT 60 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM 114 + TF+RGY+RSYA+ + IP+ + + + + ++ + + W+ Sbjct: 61 IPS-TFMRGYVRSYAKFLKIPDSDWVNTINFGHVQKNDLGKNARATRAVNQYSSHNNWVG 119 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQ---SVPLNTSTT 171 + +V+ +V+G++G WWW+ + E + + + ++ + V + T Sbjct: 120 YLSVIVVLIVVGMTGMWWWESHQQSNVERDILVNTYTNSVAETTTSKPITNEVVVPQPTK 179 Query: 172 TDPATTSTPPASVDT-----TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAP 226 + T T P + Q + P+ + N + S Sbjct: 180 IENTLTDTAPKGTNIEIETKPLVEPQIAGSSTPSESTQSSGNVLQSEMNKISGNEQLSMT 239 Query: 227 TAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 AT G + + V+T A + L + +CW+ V D K L ++ L Sbjct: 240 QTATQASGEQQSAVENSNVSTADASKDNLHIEVIGNCWISVKDKNRKVLAQKEYKQGDVL 299 Query: 287 NLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + + PY L IGAP V+I Y+G+ L +VA+ L Sbjct: 300 SFNEEEPYSLIIGAPGNVRITYKGEAFPL---TVDGRVAKFKLPQ 341 >UniRef50_Q3ICZ4 Putative transcriptional regulator, HTH domain n=2 Tax=Alteromonadales RepID=Q3ICZ4_PSEHT Length = 287 Score = 192 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 137/333 (41%), Gaps = 46/333 (13%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN E T Q+E + G L+ RE +S +A L L V V+ +E D+ +TF Sbjct: 1 MNEEITQPQSEQPSLGQILKTHRENADISLATMATHLKLTVLQVQRMENDEYQLLGPTTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++GYI++Y R + I +L L AP K MQSFS ++ D LM ++++ Sbjct: 61 VKGYIKNYCRELKIDHTPILAMLP--APTTPEKPVDMQSFSRRTEKEANDSRLMIASYII 118 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L +VIG S WWWQ+ +E+ + + ++S + QS + Sbjct: 119 LAIVIGSSALWWWQNSMPIEEQTSNINVENSIMSEQQEQAAQSNIGASQQQVQEINNVAL 178 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P S +A + + Sbjct: 179 PQSEQLSALPSGNSTIN------------------------------------------- 195 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + + +VM F + W+E+ DA G+K+ G+++ + LTG AP+ + +G Sbjct: 196 TTTTAPNEANNSSTIVMLFNDESWVEIYDAEGEKIAFGVKKAGYEMTLTGIAPFSVVLGK 255 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 AV I G+ VDLS F N++A+ L + Sbjct: 256 HDAVNITLNGETVDLSAF-PKNRLAKFKLPLAE 287 >UniRef50_B9CX69 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=B9CX69_9PAST Length = 334 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 84/339 (24%), Positives = 139/339 (41%), Gaps = 11/339 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLAST 59 M L+ G +L++ARE L LS + VA++ LK S + +E D ++A T Sbjct: 1 MTESINTTSQPTLSLGQQLKSAREALNLSIEDVAQKTNLKKSHLESLENDIFILQNVAPT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F+RGY+R+Y R + +PEE + + K ++ S +K ++ W+ T Sbjct: 61 FVRGYVRNYVRFLRLPEELVSSV--NYGEVTIPKEIVHKTSSEKVVQKSQNQWVKYLTIF 118 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 VL IG++ WWWQD +A+Q+ + + ++ + + PATT+T Sbjct: 119 VLLGAIGMTLLWWWQDYQAEQQNRDQFVNNAIPVEATPTPANTNQATQVEPIIQPATTNT 178 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSP---SQANVDTAATPAPTAATTPDGAA 236 +T A + PA A + + + A AP + Sbjct: 179 ETVVANTAAPANEQPAQPVAQVAQSSETAPTPTTQELATQPAPVATEVAPQIESANVLQQ 238 Query: 237 PLPTDQAGVTTPVADPNALVMNFTA-DCWLEVTDATGKK-LFSGMQRKDGNLNLTGQAPY 294 + L + T + W+ V + KK L + L G Y Sbjct: 239 TQTNPVETEQPAAVSNDELRIEITGKESWITVKNTKSKKSLAEKLYTNGEVLAFNGNEQY 298 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 +L IGAPA V++ Y+G+ V L +VAR+ L Q Sbjct: 299 RLTIGAPANVKLYYKGQLVPLK---IDGRVARIKLPLAQ 334 >UniRef50_A5EVN3 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVN3_DICNV Length = 326 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 117/333 (35%), Gaps = 7/333 (2%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + + T G LR ARE+ S A++ L + ++ +E + A F Sbjct: 1 MTDINDNKTSIDDTIGDALRAAREEKQWSITEAADQTNLNPTIIQLLEANDFKNIGAFVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+ SYAR + + +E++ + P + + + R KR+ T L Sbjct: 61 TRGYLNSYARALGLNADEIVQLFNRLYPDTSQPRISSANAASQTRSFKRNNIAAWLTILP 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + +V + + Q A + N++ + N T Sbjct: 121 ILIVAAALAV-------QIMNPNSWLITQFKATFAPNAKTAPATGENLVVQIGTEPPETA 173 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + + ++ PAP + + + T + +A + AP Sbjct: 174 ANTALPPPELPELTSLETPAPQPEENTALINPTTPETTTTESPAESSAPEQNNALAPENA 233 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 A T + + T + W+EV D+ K L+S + ++ L+ Y + +G Sbjct: 234 STAQPTATADASKTIRIEITGENWVEVRDSNRKILYSKTFKSGESIELSDGQTYTVSLGR 293 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 P + + G+P D ++ R + Q Sbjct: 294 PQSANLMIAGQPADWQKYRVEGNQRRFRIGTAQ 326 >UniRef50_A8FT69 Putative uncharacterized protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FT69_SHESH Length = 310 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 82/329 (24%), Positives = 132/329 (40%), Gaps = 36/329 (10%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 T + + G+ L+ ARE+ G S +A +L L+ V DIE D ++T+++GY Sbjct: 18 ETDTSEQEDSLGSLLKAAREKQGASVADIAGQLHLRPCIVEDIEADNFGEIASATYVKGY 77 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +++YAR+V ++ + L++Q P A MQSFS R+ RDG LM T+ Sbjct: 78 VKNYARIVQADKKAIQACLDRQLP--KASAPEMQSFSRKTTRQARDGRLMFVTY------ 129 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 + S+ + L+ T + A + V Sbjct: 130 ----------------LIAFILLALLVLWWVQKSDTLSDIDLSKPTVEEMADSQLTQVEV 173 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 +T P A + + A + + Sbjct: 174 ASTLVEEGDPLTGLQT-----------DTHTATATKTPSDRESEKGEQADAVEMESVPTS 222 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 V V ++L + DCW+ V DA G L + ++ LN++G P+K+ +GAP AV Sbjct: 223 VEKAVTRLSSLSFDLNGDCWINVKDAKGDTLINDLKTAGSQLNVSGVEPFKITLGAPQAV 282 Query: 305 QIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 I+ G+ V LS F +VARLTL Q Sbjct: 283 SIKLNGEKVSLSDF-PNGRVARLTLPMAQ 310 >UniRef50_Q0HKW0 Putative uncharacterized protein n=11 Tax=Shewanella RepID=Q0HKW0_SHESM Length = 380 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 149/367 (40%), Gaps = 43/367 (11%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + + +T G LR AREQ+GLS A +L L+ V ++E D +ST++RGY Sbjct: 16 SEAESTPDVTLGTVLRTAREQMGLSIADTAVKLHLRPGIVENLEADDFSNISSSTYVRGY 75 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +++YAR++ + + L +Q PL MQSFS + RD L ++ ++ V+ Sbjct: 76 VKNYARMLGVDNALIEACLTRQVPLVTQ--PAMQSFSRKTTYQARDTKLKWLSFFIVIVL 133 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSN-------------SEQGQSVPLNTSTT 171 +GL WW Q + ++ SE+ + +N S Sbjct: 134 LGLFVLWWMQRTTLVTHVDISKPTAEELAAANQTLPGDVLLTETDASERLSEIAVNGSMA 193 Query: 172 TDPATTSTPPASVDTTATNTQTPAV-------------------------TAPAPAVDPQ 206 TD T +++D ++ TAP A Sbjct: 194 TDGPVKDTDASTIDPNMNDSAAMEAEQTSAANSAMNASESSTALTNNASNTAPNTASTSG 253 Query: 207 QNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP-VADPNALVMNFTADCWL 265 + +V+ A + A AP T T P A +++ + T DCW+ Sbjct: 254 ASNIVAVPNATQNGATNTAPVQNQTASNTPATNTASTAQAMPVAAGQSSITIELTGDCWI 313 Query: 266 EVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQV 324 + DA GK + G++ N+ +G P+K+ +GAP V GK + L+ F +V Sbjct: 314 NIVDAKGKAIVDGVRGAGANIQASGVPPFKVILGAPTVVSTFTVDGKAISLAEF-PKGRV 372 Query: 325 ARLTLNA 331 ARLT+ Sbjct: 373 ARLTIPQ 379 >UniRef50_Q5QYA8 Predicted transcriptional regulator, contains N-terminal xre-type HTH domain n=1 Tax=Idiomarina loihiensis RepID=Q5QYA8_IDILO Length = 365 Score = 186 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 22/349 (6%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 +Q + G LR ARE GL Q+ VA++L L+ + +E D +TF++GY Sbjct: 20 QETEQKPSKGPGEILREAREAKGLEQREVADQLRLRKQIIELLEADDYSTFSTATFIKGY 79 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +RSYA+L+ + + EL + + + + + MQSFS K+ ++ D LM V+ ++ Sbjct: 80 LRSYAKLLDLDDTELFEAYKAR-GYKEVESSQMQSFSRRKKHEESDNRLM-LITYVVIII 137 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP--- 181 + WWWQ+ E T +SS N++ + + P P Sbjct: 138 VVALVIWWWQEPDLGFSEGETGTQESSEVSPVNTDDEADNVGDIEISNQPTEPQIAPNED 197 Query: 182 -----ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 + V+ TN +V P N SQA +A Sbjct: 198 EAILESEVEADDTNVAVESVQEPVSESGENDNENNDESQAANTDSAANDVNDTQELPTET 257 Query: 237 PLPTDQAGVTT-----------PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 TD T+ P A +LV+ F +CW+++ DA+G+ G++ Sbjct: 258 AEQTDNQAETSVESEAVEPSPQPEAVSASLVLEFNEECWVKIDDASGETQAVGVKAAGYR 317 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS 334 + + G+AP+ + + P AV + + G ++ +F RT +VAR T+ +E+ Sbjct: 318 MPVPGEAPFSVTLCKPEAVNVSFNGNAFNMDQF-RTGRVARFTVPSEEQ 365 >UniRef50_A4C7F7 Putative transcriptional regulator, HTH domain n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C7F7_9GAMM Length = 315 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 24/336 (7%) Query: 1 MNTEATHD---QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M + D + G+ L RE +S A+RL L + + ++E ++ Sbjct: 1 MIEQEVTDNTVETPLPLVGSFLTAGREAAKISVDEFAKRLNLSAAQLTNLESNQFALLGP 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +TF++GYI+SY + + + E +L + Q ++ MQSFS ++ D LM F+ Sbjct: 61 ATFVKGYIKSYCKFLSLDESYVLSLYDAQ--TEGPTISKMQSFSRRTEKEAHDNRLMLFS 118 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 + VL +VIGLS WWWQ+R I + Q+ + S SV S P Sbjct: 119 YAVLSLVIGLSVLWWWQNRDTTPAPIASPEIQNVEQQSV------SVVAQDSLQKQPVQN 172 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 +++ +T + + +P V+ A Sbjct: 173 QDAQLGLNSE-------QITNELSEQTQVEQSEQTPESTQVEQELNEATQVIEPVVAVIK 225 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 QA + N +VM F D W+E+ D++ ++ G+++ + + G+AP+ + Sbjct: 226 KNDKQANNSL-----NKVVMYFNNDSWVEIFDSSAARVAFGVKKAGYTMTVEGKAPFAVV 280 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 +G P V++++ G+ +D+S+F ++++A+ +L + Sbjct: 281 VGKPHLVEVEFDGEQIDMSKF-PSHRLAKFSLPLTE 315 >UniRef50_A3N1H9 Putative uncharacterized protein n=4 Tax=Pasteurellaceae RepID=A3N1H9_ACTP2 Length = 322 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 136/337 (40%), Gaps = 19/337 (5%) Query: 1 MNT-EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLAS 58 M +N+ + G +L+ ARE L LS + VA++ LK S + +E D ++A Sbjct: 1 MTESTHPMQENQDIPLGQKLKQAREALHLSIEDVAKKTNLKKSHIESLENDIFILQNVAP 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 TF+RGY+R+Y R + +PE + +++ S +K + W+ T Sbjct: 61 TFVRGYVRNYLRFLRLPEALVSTV---NYGEVIIPKDAIKTPSPKVVQKSQTKWVKYLTI 117 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 LVL +G++ WWWQD + +QE + S + + + P+ P+ Sbjct: 118 LVLLGAVGMTLLWWWQDYQKEQESREHIVSSS---VVEPTATQATAPITAPVVETPSAPV 174 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 ++T T +P T + + ++ + A T A + Sbjct: 175 AVAPVMETPKAETTSPMPT------ENNALNTAAATEQPQVSVTPEATTEAVNVLQQPAI 228 Query: 239 PTDQAGVTTPVADPNALVMNFTA-DCWLEVTDATGKK-LFSGMQRKDGNLNLTGQAPYKL 296 + L + T + W+ V + KK L + L G Y+L Sbjct: 229 EPAAEQSQAAAVGNDELRIEITGKESWITVKGSKSKKSLAEKLYSNGEVLTFNGDEQYRL 288 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 IGAPA V++ Y+G+ V L +VAR+ L Q Sbjct: 289 TIGAPANVKLYYKGQEVPLK---IDGRVARIRLPLAQ 322 >UniRef50_C6IW30 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IW30_9BACL Length = 347 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 13/306 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR AR GLS V E ++ + IE S ++R +I++YA V Sbjct: 3 DLGQQLREARLARGLSLDDVQEMTKIRKRYLEAIEMGDYKVLPGSFYVRAFIKTYAETVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL--FVVIGLSGAW 131 + +ELL + P A + + R+ + + ++ F V+ L + Sbjct: 63 LDADELLAEHRQNVPSTAPEPTMEPVIQKRRSRQHNERNSKWLSTTLMWSFAVLILIVIY 122 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + + + + + + A Sbjct: 123 LYFSVWGNNNDQADGNKEP--------DPTPVTQGTSQNGNQTGNATGGDAVGGNNGVEN 174 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 T T P N + + + T A T + + P Sbjct: 175 GTNNGTEPGINQGTDTNTGNAGNTGDESPTNDTGNQTVTIVPDGAEGSTTKFKIQNPGTG 234 Query: 252 PNALVMNFTADCWLEVT--DATGKKLFSGMQRKDGNLNLT-GQAPYKLKIGAPAAVQIQY 308 P +V+ + W+EV ++ G+KLF ++ L G +K G + I Sbjct: 235 PVQVVITASGKSWVEVRKGNSKGEKLFYDNTKEGDVLTYDIGPEGLFVKSGNSSQTVITV 294 Query: 309 QGKPVD 314 G+ ++ Sbjct: 295 AGQTIE 300 >UniRef50_C5TVA8 XRE family transcriptional regulator n=3 Tax=Desulfovibrio vulgaris RepID=C5TVA8_DESVU Length = 313 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 109/322 (33%), Gaps = 11/322 (3%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G LR RE G S VA RL + +R IE+ + + RG+I++YA + Sbjct: 3 LQELGLMLREEREARGFSLDLVATRLKVSARILRAIEQGDVDDLPHAVYARGFIKAYASM 62 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + I + ++ P + ++ + + R L L + + Sbjct: 63 LGITPGIVAEVVDSVYPCEIQEDLV-ENPGVVEPVSGRGRRAGVLLTLGLVACGLMFAGY 121 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 W+ +K+ +E++ + + + + + P +T S PP Sbjct: 122 WYYKQKSAREQMPAVTGTAPFVEPAPQQVVPAPPTSTE-------ESVPPTVDGAVPAVP 174 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 A P Q + S + + +PT P A Sbjct: 175 AAGAADGAKPVAPEQPVTASNASSSAMADKLLGSPTPEQKAKEVLVPQQGDDAGALPPAG 234 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 + +++ A+CW+ T A + RK LT LK+G V +++ GK Sbjct: 235 KHRIIVTAVAECWVHST-ADNADVRQFSLRKGETFALTFSRSLSLKLGNAGGVNVRFDGK 293 Query: 312 PVDLSRFIRTNQVARLTLNAEQ 333 D+ QV LT + Sbjct: 294 --DMGAPGEPGQVKTLTFPPSE 313 >UniRef50_A6FA10 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FA10_9GAMM Length = 327 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 85/322 (26%), Positives = 142/322 (44%), Gaps = 17/322 (5%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + +T G L++AR G+S Q V + LK+S + +IE+ A ++STF+RGYIR YAR Sbjct: 22 DVVTAGQMLQDARIASGISVQEVCNHIHLKLSVINNIEQSVADKQISSTFMRGYIRCYAR 81 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + I E+E++ + Q + + +QSFS + + D LM ++ ++ ++ + Sbjct: 82 YLKISEDEVITAYDGQN-VACEQQTELQSFSCRTKLEAHDNRLMLVSYGIIGFMLAVFLI 140 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W D + + S + P ST S + +T Sbjct: 141 WGLGDDVDVDVVVPEPII-TQTIESVGAVTVIEEQAPLVVAESPEFDSTEFESTELDSTV 199 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 QTPA+ AP A V + T P Sbjct: 200 AQTPALDVIAPPSSEVVPAEVLAHVTALPTIT--------------SPVVTNTPDNKPAI 245 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 +LV+ F DCW++V D GK L +G+++ +++L G AP +K+GAP V + Y G Sbjct: 246 VAQSLVLTFAGDCWIQVKDKNGKTLSTGVRKAGQSISLQGLAPLSIKLGAPEYVTMSYAG 305 Query: 311 KPVDLSRFIRTNQVARLTLNAE 332 + VDLS F + ++A+ + E Sbjct: 306 ESVDLSTF-KQGKLAKFKVPFE 326 >UniRef50_Q2LVM8 Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVM8_SYNAS Length = 300 Score = 183 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 112/326 (34%), Gaps = 28/326 (8%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + D + T G+ L+ ARE GLS + V E+ + VS + IE D+ + R + Sbjct: 3 SEQDNEDLKTLGSGLKTARESKGLSLKDVNEKTRISVSILDAIENDRFHLLPPGVYTRNF 62 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 IR+YA + + +ELL K+ A V + +R W + V ++ Sbjct: 63 IRTYADFLGVDSQELLDHFTKEREQTAPPVLQKDDADISAVNHRRY-WKVFAIGAVALIL 121 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 IG+ A I++ + +++G + D A S + Sbjct: 122 IGVLVWSLNSCWYAGNSAISS-------FIGEKNDEGPIPQVKLPNRDDGAVNSDKGLFI 174 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 ++ T A+ Q + V + + + A Sbjct: 175 PAASSRTLPDALRPEIARPVNLQQSTVQDVYPRISASIPDSEQKAEENS----------- 223 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 LV+ WL++ G + +N T + + L IG A V Sbjct: 224 ------GRYQLVIEAKERTWLQIRADDGAAS-QVILNPGERINRTAREHFILDIGNAAGV 276 Query: 305 QIQYQGKPVDLSRFIRTNQVARLTLN 330 + +QG+ L + QVA L L Sbjct: 277 SVSFQGRK--LENLGKRGQVAHLRLP 300 >UniRef50_A4XY33 Helix-turn-helix domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XY33_PSEMY Length = 329 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 80/329 (24%), Positives = 134/329 (40%), Gaps = 5/329 (1%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 ++EA + G LR ARE G S VA +L L + IE +TF Sbjct: 5 HSEAVTQPMPS-NPGESLRQAREIKGWSVAEVAMQLNLTPQRLAQIEAGAFDKLPGTTFA 63 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RGYIR+YA+L+ + + L+ ++ A + + + L ++L+L Sbjct: 64 RGYIRAYAKLLELDQNRLVLEFDQFTGTDATGSNVHSLGRIEEPVRYSQSILRLVSFLLL 123 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 +IG WW + ++ + E + + Q S+ A + Sbjct: 124 LALIGAGFLWWQEQGRSVTSLADLGLEHVEVEGADGTTQVHSLAEPEDQAVVAAQGNESA 183 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 + + + P + + +AA A T AP + Sbjct: 184 SPLLLPIEPGEAP---EAVTETQQPAAEGTAAAPTPAPSAAPEATQPDTAAAPQAPAAPE 240 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A AL + FTADCW +VTDA GK L S ++R + LTG+AP +L++G Sbjct: 241 PAAPVEVAPGQGALSVQFTADCWTQVTDADGKVLLSALKRSGERIELTGKAPMELRLGFA 300 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Q+++ G+ VD++ ++ T + ARL L Sbjct: 301 RGAQVRFNGENVDVAPYM-TGETARLKLG 328 >UniRef50_Q2BGS7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGS7_9GAMM Length = 341 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 85/343 (24%), Positives = 142/343 (41%), Gaps = 12/343 (3%) Query: 1 MNTEATHDQNEAL--TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 M+TE Q E L GARL ARE L LS + V+ L L +R +E + Sbjct: 1 MSTEEQECQPELLAEEWGARLTTARESLSLSIEQVSADLNLPQDYIRKLEIGSLEGLPSL 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 F RGYIR+YA+L+H+ + +L+ E+ + S + ++ K D + +W Sbjct: 61 VFARGYIRAYAKLLHLDDNQLVSEFEQLHGESSGGAIKPVS-RVREQVKVNDPVMKLSSW 119 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 + + +IG++ WW ++ + E +E A Sbjct: 120 IFVLAIIGVTVWWWQTQYGGSFSFSSSSETEQMTEQPLVAEDNADTADVVELEDGTAKLV 179 Query: 179 TP-----PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPT--AATT 231 P PA + T A T+ Q + AP AA+ Sbjct: 180 LPVLEDSPAGEEAQEEPASTEAETSEVAEESEPQYLTQAEINKLQQAIDDNAPATHAASE 239 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 P A + + + A + +F A+CW+ + DA GK LF+ ++ K +L ++G+ Sbjct: 240 PAVQAAPAIEASVAQSSEALTAKISADFVAECWVSIKDADGKTLFNNLRGKGQSLEVSGK 299 Query: 292 APYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 AP + +GA AV + + G +DL + R N V R++L + Sbjct: 300 APVSILLGAADAVGRFTFNGTELDLDKHSRKN-VVRISLPISE 341 >UniRef50_A6VV05 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VV05_MARMS Length = 341 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 13/339 (3%) Query: 1 MNTEATHDQN------EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA 54 M TE D + + + G RL+ R +L ++ VA L + + VR +E + Sbjct: 7 MTTEFQTDASVSKTNMDTINIGNRLKAKRLELEFDERHVATELKISIDQVRALEANNFKY 66 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM 114 + TF RG+++SY RL+ I E+L + + + P+ + + Sbjct: 67 FRSITFARGFLKSYCRLLGIEPSEMLRAFDSEREDAEPTIKPVDKVNKQTNFGDPIVIFI 126 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 + + + V + WW + S + + + ++ +S + D Sbjct: 127 SVVIVAVLVFL---VFWWPSQSSVSVASNEIKNEVSETATAPDLDATEAFSGESSGSVDT 183 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP-- 232 + S + DT + P N V + A Sbjct: 184 SNVSNSNSGADTDVASVDNTESVPSVQVEKPASNGGVVTGLSAETMAILEEAGVKPEDVI 243 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 A +P + A + + + + F ADCW EV DA+GK LFSG++ L+LTG+A Sbjct: 244 RATAEVPAELAAAPKLPSYTDEVEIAFDADCWTEVRDASGKILFSGVKSAGSQLSLTGKA 303 Query: 293 PYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLN 330 PY++ +G V ++Y+G+ D S F + +AR L Sbjct: 304 PYRIVLGYAKGVSSLKYKGEVFDFSSFTHKD-LARFELK 341 >UniRef50_A4BSV3 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSV3_9GAMM Length = 363 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 132/350 (37%), Gaps = 23/350 (6%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 E E G LR ARE+ LS ++A+ L L+ + +E D T++RG Sbjct: 12 EIESLSKERHGPGLSLRQARERCRLSVASIADTLHLEPRVIEALEADDYSQLPPVTYVRG 71 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+ +YARLV++P +L E+ ++ + + G RR R ++ + F+ Sbjct: 72 YLSAYARLVNLPVANVLQAFERVGGEERSQPLTLHAGRAGNRRMARFSIGSSWLLTLAFI 131 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSS-----AELSSNSEQGQSVPLNTSTTTDPATTS 178 + +SG +W ++ E + + + L SE + + + Sbjct: 132 AVLISGWMFWTQGQSTSEVASPDENNAVDAGPDTMLDPKSEPDAAAAGSEILAAPTGADT 191 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD----- 233 PA TA+ T PA + + + TP A P Sbjct: 192 ALPAHRAETASLTTQPAAPPGERLSRDPHMSGAETAGETSAVSPTPQREAPLIPSAKIGT 251 Query: 234 ------------GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQR 281 ++ L + + W+ V A G++L G+ Sbjct: 252 ASIADHKPAALAATTVGVAPESIAAQRAGALETLKFDASGKSWVTVEAAGGQRLVYGLLE 311 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + + +TG+ P+++ IG V +++ G VDL + N VAR TL+A Sbjct: 312 RGESRRVTGRPPFRITIGDATQVMLRHNGTRVDLGPYTHAN-VARFTLSA 360 >UniRef50_C5S9Y0 Transcriptional regulator, XRE family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9Y0_CHRVI Length = 360 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 ++ + T G RLR RE L + VA +L L+ V IE D+ A F+ Sbjct: 10 SDDPNMLEPNDTPGRRLRALRESRKLDVERVAAQLHLQRHVVEAIEGDQYERLPAPVFVV 69 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 GY+++YARL+ ++ P+R ++ S + G + ++L Sbjct: 70 GYLKNYARLLGADPAPIVTAYRAMVPVREVGLSHALSVPDDSSQSSGGGRWVWAVAVLLV 129 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 V+ W + + + +A E S+++ + P +TS A ++ A Sbjct: 130 GVVAGMATLWLRGQSDSTLQSDALALSPKGEESASTVAAPAKPSDTSGVATAANATSVSA 189 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQ-------------------NAVVSPSQANVDTAAT 223 + + ++ +V+ S + T Sbjct: 190 AGPESTIAAPPESIPLRGAQSQSPAGATPAEPAEPAAPATPAPVETLVAASTLTSAQSTT 249 Query: 224 PAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD 283 A A P +V+ FT W++V A G + +G R Sbjct: 250 NEALADEEASDAEAQAESVTEEPAPEPTSTEVVLEFTGTSWIDVRGAGGGVVLNGEMRSG 309 Query: 284 GNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 L G+ PYK IG +A Q+ G+P DL R R VAR TL+ Sbjct: 310 DRRVLDGEPPYKFVIGNASATQLTIGGRPFDLQRRAR-GNVARFTLD 355 >UniRef50_UPI0001698B56 hypothetical protein Epers_35392 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B56 Length = 356 Score = 181 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 79/356 (22%), Positives = 130/356 (36%), Gaps = 24/356 (6%) Query: 1 MNTEATHDQNEA------LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA 54 M+ +T D + G+RLR RE LG+ Q +A +L L + + +E D Sbjct: 1 MSVLSTKDAEQMGAGQPIEGPGSRLRKEREALGIDQMKLAAQLHLSETMIEALEWDDYEV 60 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM 114 + F++GY+++YAR++ +PE E++ APL A + + K + G + Sbjct: 61 LPSPVFVQGYLKNYARILGVPEHEVIDAYRALAPLPEEARALNGNRKVLKEMRSNHGGVR 120 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 TW+++ ++ L WW +++ A + L + L+ + Sbjct: 121 IVTWVIVIALLLLLAIWWQGEQELHDMSTADQATLQESMLEEGEAAPDNPGLSLPPPLEV 180 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAP----------------AVDPQQNAVVSPSQANV 218 PA+ T AV P P V S V Sbjct: 181 TPKKIAPATEIEPPTPQDEAAVVEPPPLTQTLTEETTQVDAREPVGAAAEIAAEQSAEVV 240 Query: 219 DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSG 278 A A + A A P + ++V+ F CW E+ DA+G+ G Sbjct: 241 VEALQEAAPTTSDAVEAEESVEVDAAPAEPGSAFPSVVIEFNDSCWAEIRDASGRTRLIG 300 Query: 279 MQRKDGNLNL-TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 + L APY++ G AV + G DL R N VAR + Sbjct: 301 NMKVGDRRVLGNWPAPYRVLFGNAGAVNMSINGDTFDLEPHTRRN-VARFRFDPAD 355 >UniRef50_A6VQX7 Helix-turn-helix domain protein n=4 Tax=Pasteurellaceae RepID=A6VQX7_ACTSZ Length = 312 Score = 181 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 80/328 (24%), Positives = 134/328 (40%), Gaps = 22/328 (6%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRGYI 65 ++ G + R ARE LGLS + A++L L+V ++ IE ++ + +TF++GY+ Sbjct: 3 TEEKNVAALGEQFRQARENLGLSLEEAAKKLNLRVQVLQFIENNEFAQKSIPATFMQGYV 62 Query: 66 RSYARLVHIPEEELLPGLEK--QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 RSYA+LV +PE + P A ++ + W+ FT ++L Sbjct: 63 RSYAKLVKLPESIWRGAVPSFGDMPKNDLSRAARIDKAINPHSSHNNRWIGYFTAIILLF 122 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 V G++ WWW++ + +E T+ + TT+ + P Sbjct: 123 VAGMTALWWWENYQQSNKERETLVQNYT---------------PVETTSVQSKDLLPAVQ 167 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 V ++T + + + N ++ + TA + A D Sbjct: 168 VPVNPSDTAAETLMQSERPTASTIESGTVSTDTNSTQSSVESLTAQNNVESAVENSDDSQ 227 Query: 244 GVTTPVADPNALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 PVA L + TA W+ V DA K L R+ LN APY + IGAP+ Sbjct: 228 PAAAPVAADGDLQIEITAATSWISVKDAKRKVLAQKEYRQGETLNFKDGAPYAVIIGAPS 287 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V+I Y+G+ L +VA+ L Sbjct: 288 NVKITYKGENYPLK---VDGRVAKFKLQ 312 >UniRef50_B0KPI6 Transcriptional regulator, XRE family n=22 Tax=Pseudomonadaceae RepID=B0KPI6_PSEPG Length = 344 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 91/346 (26%), Positives = 141/346 (40%), Gaps = 17/346 (4%) Query: 1 MNTEATH-DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 MN G LR ARE+ SQ VA +L L VS++ +E T Sbjct: 1 MNAAHPEVAVAPGQNPGELLRLAREKRDWSQAEVARKLNLTVSSLNHVETGAFDKLPGHT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F RGYIR+YA+L+ + + L+ ++ AK + + S + + ++ L Sbjct: 61 FARGYIRAYAKLMELDQAALVEAFDR-YTGTHAKGSEVHSLGRIEEPVRLSHNILRGVSL 119 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS---TTTDPAT 176 +L V + G WWQD+ + + + E+ S Q PL+ + Sbjct: 120 LLLVAVVGGGFVWWQDQGSLRGKDLAKIALEHVEVESADGTTQIHPLDEPEDQAVSVGQQ 179 Query: 177 TSTPPASVDTTAT-----------NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA 225 + P +++ AT + PA A QQ A A Sbjct: 180 AESAPLALEQGATEQPAAAAEQAPTSAAPAAAAVPAPAAGQQAPAQPAPAAAPAPVAPVT 239 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 P A A A A + + FTADCW +V+D GK LFS ++RK N Sbjct: 240 PAPAAVAPAAPASTVVAAEPAAIPAGSAKVAIQFTADCWTQVSDGNGKVLFSAIKRKGDN 299 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 L LTG+ P+ +++G Q+ Y G+ VD++ F + + ARL L Sbjct: 300 LELTGKPPFAVRLGFARGAQVSYNGQAVDVAPFT-SGETARLKLGQ 344 >UniRef50_A1TZP9 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TZP9_MARAV Length = 340 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 9/339 (2%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E + G +LR ARE+LGLS +A++ L+ S ++ IEE F Sbjct: 1 MTGEEQSQPASEASVGQQLRRAREKLGLSVSDIADQQHLRPSVIQSIEEGDYSKVDTELF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQA-PLRAAKVAPMQSFSLG--KRRKKRDGWLMTFT 117 L+GY+R+YAR V + + L+ L+ + PLR + QS L +R+KKR + Sbjct: 61 LKGYVRTYARQVQLNADALIAALDSELEPLRQQREQEHQSNPLVDIERKKKRKRQIAKLV 120 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L+ F+ + A+ + + + + S + + + E + Sbjct: 121 VLLAFLGVVGFLAYSYLVKPVSEPVQSNADGISESLEAQSGEAVSDASPKLEEAPSVSEE 180 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQA-----NVDTAATPAPTAATTP 232 + PA + ++T + A+ P+ + + P+ Sbjct: 181 AEQPAEPEQMDSDTGSVGNVETESGAVTDTEALSEPTASGSLGQEELLSEQPSVEQPPVV 240 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 + ++ V + L M F+ DCW++VTD G +L S ++R+ L ++GQ Sbjct: 241 AQSPDPALTESEVMEDPVETVRLAMTFSDDCWIQVTDGAGNRLASALRREGDALEVSGQP 300 Query: 293 PYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 P ++ +GA +AV+ +++QG+P+ L F N + TL Sbjct: 301 PLRVVVGAMSAVESLEFQGEPMGLGNFRVVNNRSEFTLE 339 >UniRef50_A6ADB9 Integral membrane protein (Fragment) n=34 Tax=Vibrio RepID=A6ADB9_VIBCH Length = 325 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 93/312 (29%), Positives = 147/312 (47%), Gaps = 19/312 (6%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + E + G L+ RE LGL+Q+ +A+RL L++S ++ IEE++ +TF Sbjct: 14 TEQLNQPAIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFT 73 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RGY+RSYA+ V I E E+L + + M+SFS +R+ D +M TW++L Sbjct: 74 RGYLRSYAKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITWVIL 133 Query: 122 FVVIGLSGAWWWQDRKAQQEEIT---------TMADQSSAELSSNSEQGQSVPLNTSTTT 172 V++G+S WWWQ+ + + S+ +N + PLN Sbjct: 134 AVIVGMSTLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDTSLANEDFATVPPLNELQDA 193 Query: 173 DPATTSTP-------PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA 225 PA+ P + + T V P V+ A V+P+Q T Sbjct: 194 APASEEAPMSQESLSGEASELTPPAPNEADVVTDKPVVEETATAPVAPAQPQGQTPVQSQ 253 Query: 226 PTAATTP---DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRK 282 A P AAP Q ++ + LVMNF+ADCW++V DATGK L +G+++ Sbjct: 254 APVAAAPVTQPEAAPSAPSQPVSSSTESASALLVMNFSADCWIQVKDATGKTLSTGVKKA 313 Query: 283 DGNLNLTGQAPY 294 +++L+GQ PY Sbjct: 314 GQSVSLSGQRPY 325 >UniRef50_C7LQ79 Transcriptional regulator, XRE family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQ79_DESBD Length = 314 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 103/320 (32%), Gaps = 7/320 (2%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + + G LR REQ GL+ +AV E+ + S + +EE + + + RG++RSYA Sbjct: 2 DLIEIGTALREGREQKGLTVEAVEEKTKIAPSVIIALEEGNSARFPHAVYARGFVRSYAM 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 L+ + +EL ++ P+ P + G ++ +V + I + GA Sbjct: 62 LLGLDAQELCAHFSREYPVPKDTDQPDSHAPQIHVKMHDSGNVVVTVRIVAILGILILGA 121 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W + + + + + + +P + + A N Sbjct: 122 LGWYVFDHYRSRASEAPAPVGEQTAPPAPPAEVLPSGSLPAPLTQMQEVAATPAEQPAAN 181 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + A ++ + T+ + A Sbjct: 182 MTASNASEEALNATAGVSSFAATEAVPGQDPV---AAPEPVVAAEPAAQTETVTASAASA 238 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 + + + WL+ ++ RK +T +K G V+++ G Sbjct: 239 GERTMRIVAHSASWLQARPDD--RILDYFLRKGETTTITFSESLSIKFGNAGGVKLELDG 296 Query: 311 KPVDLSRFIRTNQVARLTLN 330 +P +V L + Sbjct: 297 QPYPFE--GTLGEVKTLVVE 314 >UniRef50_Q7VME3 Putative uncharacterized protein n=1 Tax=Haemophilus ducreyi RepID=Q7VME3_HAEDU Length = 323 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 26/339 (7%) Query: 1 MNTE--ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLA 57 M + + G +L+ ARE L L+ + VA++ LK S + +E D ++A Sbjct: 6 MTESINPKQENQAKHSLGHKLKQAREALNLTIEDVAKKTNLKKSHIEALENDIFILQNVA 65 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 TF+RGY+R+Y R + + +E + + +V+ M S + K + W+ + T Sbjct: 66 PTFVRGYVRNYLRFLRL-PKEWGDNVNYGEVILPKEVSNMASATT-TEHKSQTKWVKSIT 123 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L+L I ++ WWWQD + +Q+ S + +N Q + L T+ + Sbjct: 124 VLILLAAISMTLLWWWQDYQQEQK--------SREQFVNNVTQEEPSALPTALVEPEPPS 175 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 + + + ++ +T ++P A+ P A A P Sbjct: 176 TLEANIAEQSQSSVKTELHSSPPNTTFDTIEALDEPVNILQQINPEVAAADAIKPSLPDT 235 Query: 238 LPTDQAGVTTPVADPNALVMNFTA-DCWLEVTDATGKK-LFSGMQRKDGNLNLTGQAPYK 295 + L + T + W+ V KK L + L G Y+ Sbjct: 236 QEV--------ATSNDELRIEITGKESWIAVKVPNSKKSLVEKLYANGEVLTFNGNEQYR 287 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS 334 L IGAPA V+I Y+G+PV L +VAR+ L Q Sbjct: 288 LTIGAPANVKIYYKGEPVLLK---IDGRVARIKLPLVQQ 323 >UniRef50_UPI0000E0F4D9 hypothetical protein GHTCC_02974 n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F4D9 Length = 376 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 46/376 (12%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 TE++ + + G L AR LS VA+RLCLKV+ + +E+D+ ++ TF++ Sbjct: 2 TESSQMETPLDSPGLLLAEARRAKQLSTDDVAKRLCLKVNIIEALEKDELLPSISLTFIK 61 Query: 63 GYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 GY RSYA+L+ + E ++ A MQSFS ++ D M T+ ++ Sbjct: 62 GYTRSYAKLLGLDEVHIITLFNDFHASETLIAPKKMQSFSRKVAKENNDSRWMLVTYSLI 121 Query: 122 FVVIGLSGAWW-WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 VV+ L WW Q+ + +++ +S+E NTST Sbjct: 122 AVVLILIVIWWSQQNSENFFASPSSVPALNSSEADLPVASTTEQLQNTSTIPSNLNEKQT 181 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 S+D+ + + + P ++++ + ++ A T + Sbjct: 182 TNSLDSVDSISSNGDLAGNLPEESILTESLLTETLPTETSSLEEPSVAMLTEQNNSLESN 241 Query: 241 DQAGVTTPVADP-------------------------------------------NALVM 257 D V L+ Sbjct: 242 DLNQVEQETIPDFVPDKVQGNIAQVLDLLENDAPDVESELRLFDDDMSASNDVEIVELMF 301 Query: 258 NFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSR 317 F+ DCW+++TDATG + G++++ + ++GQ P+ + +GAPA+V++ Y G+PVD+S Sbjct: 302 TFSNDCWIKITDATGNDIAYGVKKQGRVMPVSGQPPFSVILGAPASVKVNYAGEPVDIS- 360 Query: 318 FIRTNQVARLTLNAEQ 333 F+ +++ R L ++ Sbjct: 361 FLPSDRTGRFVLPLQE 376 >UniRef50_C7R5S7 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5S7_KANKD Length = 303 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 81/334 (24%), Positives = 142/334 (42%), Gaps = 36/334 (10%) Query: 1 MN-TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M+ T+ T +++ + G+ L+ AREQ G+S + V ++L L TV IE D ADL +T Sbjct: 1 MSETDQTLEKDVQFSPGSLLKQAREQAGVSIEDVMQKLKLTRQTVVSIEADDYSADLPAT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLE---KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF 116 F RGY+R+YA L+ + +++L+ + K+ L + + L K + ++ Sbjct: 61 FYRGYLRNYAELLKMDDDDLVENFDNYCKRNNLFTQNEQSLATIELEKPITSSNWFIKAI 120 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 T LV+ ++ + + Q+ +T Sbjct: 121 TTLVVLALLFAIYYLLVEKKIWQEF-------------------------------TAST 149 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 S T ++ + P P + N + + D A + Sbjct: 150 ESASEQETTLTLGQSEEGDLLTPEPVIADSTNNLSANITDPQDQATAALDDKELLSESMV 209 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 T +V+ F+ DCW+ +TDA GK L G+++ +++L+G P +L Sbjct: 210 VEEPTAEAATIVSNTGGEVVLVFSDDCWVRITDANGKVLALGIKQGGTSMSLSGPTPIEL 269 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G P+AVQ+ YQ +PVDLS + + ARL L Sbjct: 270 TLGKPSAVQLSYQNEPVDLSSY-PDTRAARLILG 302 >UniRef50_A3Y633 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y633_9GAMM Length = 343 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 21/343 (6%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 + ++ + G L+ R +L L ++ VA +L + + VR +E ++ ++TF RG Sbjct: 6 QENNENKIIVNIGKELQRKRNELNLDERQVATQLKIPIEQVRALESNQFDYFRSATFARG 65 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+++Y RL+ + E+ +L + +Q + ++ + ++ +V+ Sbjct: 66 YLKNYVRLIELDEDRILGAFDDAL----DDEPGVQPINKNGKQAQMADPIVILVSVVIGA 121 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 ++ WW + T A Q + E+ + + L + T T +TP S Sbjct: 122 MLIFLAFWWPTMMQKSPIISTRPAIQPNNEVVQEAPRVAEPELIATETPVDTTETTPSVS 181 Query: 184 ---------------VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 D TP V + + + A + A Sbjct: 182 TPDESQNLTSTDVEKTDEATPVETTPVVAQVEDEDADVVTGLSAETIAILKDAGVNPDNI 241 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 + + + + P + LV+NF++DCW EV D G+ L+SG++ D +L L Sbjct: 242 SLPANEPSLAEKAEIAANQPPLYDDDLVINFSSDCWTEVRDGNGRILYSGVKTADSSLTL 301 Query: 289 TGQAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTLN 330 T Q PYK+ +G V + Y+G+ D S F R N +AR LN Sbjct: 302 TAQGPYKVVLGFAGGVSSLIYKGEEFDFSSFTRKN-LARFELN 343 >UniRef50_Q47WB9 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WB9_COLP3 Length = 330 Score = 178 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 23/330 (6%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 +D E L+ GA L AR+ L LSQ+ ++ +L LKV+ V++IE+D + TF RG Sbjct: 24 TELNDYIEVLSPGAMLSEARKALSLSQEFISSKLNLKVALVQNIEDDIFDPSMPVTFNRG 83 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+ +YA+LV + +E+L + + + M SFS ++ +M ++L++ V Sbjct: 84 YLANYAKLVGVEVKEVLASYDALDAATIQR-SEMLSFSKETSKQAEHSRVMWLSYLIVAV 142 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 ++GL+ WW Q+ + Q ++ + M ++ + + + + +S + A Sbjct: 143 LVGLTVLWWLQESRQQADDSSNMIPNTAPAENVSGDVVTTNIEPSSLAIETAP------- 195 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + D + A+ + ++A ++ A +A P + Sbjct: 196 ---------VNDNAQLSEKKDEIELALDTSTKALINDANNDLKASANIVVNDVSQPAEPE 246 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 A V F DCW+ + DATG+++ G+++ + + G+AP + +G P Sbjct: 247 VAAISTA-----VFTFKGDCWVNIYDATGERIAWGVKKSGYVMTVQGKAPLSITVGKPEL 301 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 I + +PVD+S F +A+ L + Sbjct: 302 ASIVFNDQPVDMSAF-NVGNIAKFNLPIVE 330 >UniRef50_A1K3Y8 Transcriptional regulator n=2 Tax=Rhodocyclaceae RepID=A1K3Y8_AZOSB Length = 302 Score = 178 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 117/325 (36%), Gaps = 30/325 (9%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 G +LR ARE G S+ VA+ L L + V +E+ A F+RG++ Sbjct: 8 NPAPEGVPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGPAFVRGFM 67 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 R+YAR + + LL L+ ++A + + + + + + +++ Sbjct: 68 RNYARHLGLDPAPLLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGATLAVILL 127 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + W + + + + + P+ T PA + P Sbjct: 128 -FAVLAGWYFDWFRTDPPPGLNSDVGETVLPPAGDVAVEPVPTEPAPVPAGGAPAPVEQQ 186 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 + PA PAPA A S A+ Sbjct: 187 PGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQP----------------------- 223 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 L+ F + W+EV D +G ++SG+ ++ G+ P+ L +G V+ Sbjct: 224 -----ATPQLLFRFGGESWVEVRDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVR 278 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLN 330 +++ G+ +DL R VARLT+ Sbjct: 279 LEFNGREIDLQPHTRV-AVARLTVQ 302 >UniRef50_Q2SDW3 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SDW3_HAHCH Length = 330 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 9/334 (2%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M++EA + G+RLR ARE LG S AERL + V+ IE+ + F Sbjct: 1 MSSEAASNPAANDRPGSRLRQARENLGWSIPETAERLHVIPRYVKAIEDGEHGQLPGLVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 L+GY+R+YARLV++ E+ ++ LE++ L A ++ +K + L+ Sbjct: 61 LKGYVRAYARLVNLSEDRVIEDLEQELSLGDAGFTEERAAPTPSYEEKPKSGGGLWLILL 120 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 V ++ R ++T + ++ + + VP +S +P Sbjct: 121 ALAVAAGLIYYFLSGRDI----VSTGSTGTTMQEPEIPSEVVVVPGGSSDAIEPPAPVAE 176 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 S + T +P ++ P + T D + P Sbjct: 177 KDSSAVESEPMLLDGSTLEEEGQEPSPEDLLQPEDTGTAETSASEQPPPVTEDPVSVEPA 236 Query: 241 DQAGVTTPVA----DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 + P A+ F DCW ++ D + ++ G+ R+ ++ G+ P + Sbjct: 237 PSSASEQPAPQAAIGKVAVRATFVGDCWFDLRDKSNNRVV-GLYRQGDVVDFQGEYPLRF 295 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 IGA AV+++ GKP+D ++ N +TL Sbjct: 296 IIGAVDAVKLEVNGKPLDFGQYRVRNNRVEMTLE 329 >UniRef50_C0N2P2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2P2_9GAMM Length = 309 Score = 177 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 132/335 (39%), Gaps = 30/335 (8%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M+ + D + T G+RL+ ARE S VA +L L V +E + Sbjct: 1 MSDGHSDDATVATTSPTIGSRLQQAREAKKYSVAEVAAQLRLNKDIVTYMENQQWDKLHG 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 T+ RGY SY + + +P +E+L + SL + D F Sbjct: 61 RTYARGYFASYVKFLGLPFDEMLAVFNDEYQTSEP--------SLNLFQHGHDQLDRQFP 112 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 W +L ++ + W ++ QQ ++ A + ++ ++ + ++ S + Sbjct: 113 WFMLALIATVMVVIWLAFQQWQQTQVVQQASMAESDNVEEADNFSTSIVDPSDAIESPNQ 172 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 ++ T +Q + + + + + T+A + Sbjct: 173 PMISSAEQTA------------------EQLGISANNLDEITATEVASSTSAALERNSQM 214 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 TDQ + + L ++F+ +CW+EVT+A + L S + R D +L L P + Sbjct: 215 TVTDQQANEPVSTEESTLQLSFSGECWVEVTNADSQVLVSKVMRADQSLLLKSDQPLSIL 274 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +G A + + + VDLS ++ +ARLTL E Sbjct: 275 LGRAKAASVTFNNQTVDLSPHMQ-GDLARLTLGVE 308 >UniRef50_A3JJP6 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJP6_9ALTE Length = 343 Score = 177 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 124/340 (36%), Gaps = 11/340 (3%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E G +L+ ARE GLS VAE L+ ++ IE K F Sbjct: 1 MANEENQAAPGNRPVGPQLKKAREAKGLSVVEVAEAQHLRPVIIQAIENGKYELIDTELF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSL----GKRRKKRDGWLMTF 116 L+GYIR+YAR V + L+ L ++ + A ++ + +RR K+ T Sbjct: 61 LKGYIRAYARQVGLDGNALIADLNRELEPMREEQAQAKAANPLIDIERRRCKKRRVAKTA 120 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 WLV V+G + A + E G + ++++ Sbjct: 121 FWLVALAVLGFLIFAFIYSPSQLANLPGAGAFTGDTAQQNALESGLNGAVSSTDDDSTTQ 180 Query: 177 T------STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT 230 + + D +A+ P A + ++ + T Sbjct: 181 STPDNFLPNETSDGDVSASPANAEGALEPLIAAGTGTFSDGEAPADGSGSSPSQTVGNLT 240 Query: 231 TPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 D + L + F DCW+++ DA G+ L SG++R+ ++L Sbjct: 241 AIVDNDLSTLDAEEAPQVADNRGRLEIEFIDDCWVQIRDAYGRSLASGLKRQSDRIDLRS 300 Query: 291 QAPYKLKIGAPAAV-QIQYQGKPVDLSRFIRTNQVARLTL 329 + +L IGA A+ ++++G PVDL A L Sbjct: 301 ETDIRLVIGAANAIGAMRFEGAPVDLGSKGIVGNRAEFVL 340 >UniRef50_B6WRD8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRD8_9DELT Length = 334 Score = 176 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 114/333 (34%), Gaps = 17/333 (5%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 GA L RE+ GLS VA L + ++ +E A + +G++R+YA + Sbjct: 4 EELGAALCAERERRGLSLDDVAAHLKISSRLIQALESGDLSALPHPAYTKGFLRAYASYM 63 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPM---------QSFSLGKRRKKRDGWLMTFTWLVLFV 123 + E + P A + M + R+ GWL F L+L V Sbjct: 64 ALDPEAVAEVAHALQPAAATECTVMGGDEGLRSNPAILRHGARQGIAGWLRVFILLILVV 123 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 + G WQ ++ +AE ++ + + + S TT A ++ PA Sbjct: 124 ALAGGGWMLWQRGVFKEFTGGKEQSLPTAEPAAVAPAPEPMAPAPSATTPAAPAASVPAG 183 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT----TPDGAAPLP 239 APA V P +V A A AA + Sbjct: 184 GQAAPAPQGNGGTAAPAGGVAPVPGSVQPERSAAPAYTGMMDTRPAELTWGQTANAATVQ 243 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 A + A + +V+ +CW+ T + FS K + L ++K+G Sbjct: 244 DTAAQDPSLPAGMHRVVVTGIGECWMRATVDGEVRQFS--VHKGDIITLEFAKALEVKLG 301 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 VQ+ Y G +L + QV L Sbjct: 302 NAGGVQVSYDGT--ELPAPGQAGQVKTLVFPPA 332 >UniRef50_A0YCF8 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCF8_9GAMM Length = 282 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 128/331 (38%), Gaps = 50/331 (15%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ E T G LR RE++G S + +AE+L L V +E D F Sbjct: 1 MSEETNE------TPGQLLRVERERMGFSVRQMAEKLHLLPYQVEALEADDYLILNGDIF 54 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+++YA L+ + + L+ P R PM + + +R + + W + Sbjct: 55 CRGYLKTYAGLLGMDAKLLVDAYMSIRPERPENDYPMTASTSQIQRPHKGRSIQY--WCL 112 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 ++ + W++ R S G V D + + Sbjct: 113 AASLVVIVVLWFYGSR--------------------VSVDGGEVVGVAEFIVDGSGENAV 152 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A+ T +++AP AV +Q+ ++ A++ + Sbjct: 153 AATGKRRKDKTTADSLSAPETAVGNRQSNIIGLLPADISLDERDIAVTSPE--------- 203 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 L F+ DCW++VTD LF+ +++ + L L+G AP+ + +G Sbjct: 204 ------------GLLSFRFSGDCWVKVTDGQNVVLFAELKQAEERLQLSGVAPFNVLLGF 251 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 A V+++Y G+PV + R + N A T+ Sbjct: 252 AANVEMEYNGEPVSI-RVNQKNNSANFTVGQ 281 >UniRef50_C1PG13 Transcriptional regulator, XRE family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PG13_BACCO Length = 326 Score = 175 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 108/332 (32%), Gaps = 51/332 (15%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G RL+ AR++ G+S + E ++ +++IEE + ++R +I+ YA Sbjct: 26 MTELGNRLKEARKEKGISLDDLQEMTKIQKRYLKNIEEGNYDSMPGKFYVRAFIKQYAEA 85 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG------WLMTFTWLVLFVVI 125 V + E L + P + P Q + K+ ++ +V ++ Sbjct: 86 VGLDPETLFEEYQSDIPRTEQEEFPEQLSRVQTSSKRAAPDTVKMMNVLPRILVVAAIIA 145 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 L W+ + A + +S ++S E +S Sbjct: 146 ILFLLWFVVYKFAGHNTKEKLNSGASGDVSVQKENVKS---------------------- 183 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 A V +N S + T+ PA T + + Sbjct: 184 --------------AEKVSSGKNTGSSSEKKAAKTSKKPASKTKKTAQKLETVSSSGYTT 229 Query: 246 TTPVADPNALVMNFT---ADCWLEVTDATGKKLFSGMQRKDGNLN--LTGQAPYKLKIGA 300 T +A N + W++V ++ G F + + L+ Q + +G Sbjct: 230 TYKLAGTNQFKLELKANGGRSWVQVKNSDGSTNFQQLLNDGDSRTADLSKQKQVTITVGN 289 Query: 301 PAAVQIQYQGKP----VDLSRFIRTNQVARLT 328 ++ GK + S+ +R + + + Sbjct: 290 TVNTEVYINGKKLKYNIPASKEVRQDMIVQFN 321 >UniRef50_UPI0001788661 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788661 Length = 340 Score = 175 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 105/327 (32%), Gaps = 14/327 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR AR Q G+S V E ++ + IE S ++R +I++YA V Sbjct: 3 ELGQQLREARLQKGMSLDDVQEMTKIRKRYLEAIEAGDYKVLPGSFYVRAFIKTYAEAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 I +ELL G ++ P + R + + L+++ L + Sbjct: 63 IDPDELLEGHKQDVPKSEPEATMEPVIQKRASRPTAERNMKWLPTLLMWTFPILIVVVIY 122 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 E ++ + ++ Q P NT DP T + T T Sbjct: 123 LVAINSNEPKDEPPVSNNDQTQTDQAQNPQTPDNT----DPVTPGDGAQGGENTPDGTVN 178 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 ++D P AAT V+ Sbjct: 179 EGTDGEGTDTPDGTEGTDGTDGTDIDEPGDSTPGAATVTQDRTEGKNTVFKVSGSSVKVE 238 Query: 254 ALVMNFTADCWLEVT---DATGKKLFSGMQRKDGNLNLT-GQAPYKLKIGAPAAVQIQYQ 309 + ++ W+EV +A+G+KL M +L+ +K AA I Sbjct: 239 IVAIS-DGKSWVEVYRGNNASGEKLAFQMLENGASLSFDMDSQGLYVKSANSAATTITVG 297 Query: 310 GKPVDLSRFIRTNQVARLTLNAEQSPA 336 G+PV + +R+ L A Sbjct: 298 GQPVTDGK-----STSRIVLEPADGSA 319 >UniRef50_D2L1A7 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1A7_9DELT Length = 454 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 114/341 (33%), Gaps = 18/341 (5%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + G LR RE+ GL+ + V++++ + S + IEE + +G+I++YAR Sbjct: 2 DLRELGTILREERERQGLTIEDVSDKIKITRSCLTAIEEGNQSVLPHPVYAKGFIKNYAR 61 Query: 71 LVHIPEEELLPGLEKQAPLRAA--------KVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 L+ + +EE L + K P + + + LV F Sbjct: 62 LLGVDQEEFNRRLSQVYQPEEPVVGNVSLIKDIPEDDCGCAVKPASKVPLVPALLCLVAF 121 Query: 123 VVIGLSGAWWWQDRKA------QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 + + G + + A + A ++ L+S SE + VP+ Sbjct: 122 LAVAGLGWYLFAHVLAKSGDETESAAPQATAKPAAPPLASESEPARPVPVVPRPAEQAPP 181 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 TP + +T A +P + A +A AP A Sbjct: 182 PQTPAPAAETPAPVAPPAPKAEATTLPEPSAEDRATQDIATSGPSAPAAPAIPV-APEPA 240 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 T P+ + + CWL+ A G + M K + Sbjct: 241 APAPSAKAFTVGEHGPHTVTIVANDRCWLQA-GADGGTMHETMLEKGDTFTGRFADYLLV 299 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 ++G V+I++ K V L A+++P + Sbjct: 300 RLGNAPGVEIRFDNKLYPFQA--GKGSVKTLKFVAKKTPDE 338 Score = 55.3 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 7/148 (4%) Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 D Q + ++ + A + AP TTP A G Sbjct: 312 DNKLYPFQAGKGSVKTLKFVAKKTPDEAAQAVPGAPAPSQAPAVPTTPVAPAATAPALGG 371 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATG--KKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 P A + + W+ V G K+++ +K L + ++K+G P+ Sbjct: 372 EAVPGAGAKEVEIYGQDGSWVIVNPDKGPSKEIY---VKKGQRLTVPFSEKIEIKLGNPS 428 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +V +Y GK + V + Sbjct: 429 SVIFRYDGKETPV--VTEKGAVKTIRFP 454 >UniRef50_Q47BR5 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BR5_DECAR Length = 311 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 108/339 (31%), Gaps = 37/339 (10%) Query: 1 MNTEATHDQNEALT--------TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA 52 M+ + + G +LR ARE L +A L L V +E Sbjct: 1 MSEQVISEDAGTEESVIVSEMPVGEQLRLAREARDLEVADIARTLKLGPRQVEALECGDW 60 Query: 53 PADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD-G 111 TF+RG++R+YARLV + L+ L + A +A ++ Sbjct: 61 HGLPGQTFIRGFVRNYARLVQLDPAPLMLQLNQVLEKPADNLAMQEARPASMPNSGSGVS 120 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 LV ++ L+G ++ + + P + T+ Sbjct: 121 RRDRAVVLVGAGLVALAGLVYFLMPADLSALRESTQSLLDSLARKEVPTSAPAPASEGTS 180 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 PA+ P + Q PA + A + Sbjct: 181 AVPASEPVFP---------------------------PGATQQQVMYPQVLAPAESPAPS 213 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 + + AD + F + W+EV D K +FS ++GQ Sbjct: 214 SATPQKAESSPSQPAVTAADQPQMRFIFDKESWIEVRDRDNKIIFSQRLGAGAEQVVSGQ 273 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P L +G V++ + G+ VDL + VARL L Sbjct: 274 GPLSLTVGYAPGVRLFWHGQAVDLVPHTK-GDVARLVLE 311 >UniRef50_B8F8B5 Putative uncharacterized protein n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F8B5_HAEPS Length = 360 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 84/365 (23%), Positives = 135/365 (36%), Gaps = 43/365 (11%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA--STFLRG 63 T + L+ G +L+NARE L L+ + VA + LK S + IE D + F+RG Sbjct: 2 TMTETMTLSLGQQLKNAREALNLTIEDVARKTNLKKSHLEAIENDIF-ILPSVPPAFVRG 60 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV 123 Y+R+Y R + +PE + + K + K K + W+ TW+VL Sbjct: 61 YVRNYVRFLRLPETLVNSV--NYGEVTIPKEVRKAAPIAVKNHKSQMRWVKGLTWIVLLS 118 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT-DPATTSTPPA 182 +G++ AWWWQ+ + Q + ++ + E+ Q P+ T + T PA Sbjct: 119 AVGMTLAWWWQEHQKDQANREQLIVNTTEATAKVVEEPQVTPVEPQPTPAEVPQAVTLPA 178 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP---------- 232 AT P + V T TP ++ Sbjct: 179 KNAEPATPATVAESRTPVAVEQAELVQSVQTEPVLTQTEVTPPVQTGSSRISMVISPNSG 238 Query: 233 -----------------------DGAAPLPTDQAGVTTPVADPNALVMNFTA-DCWLEVT 268 ++QA T A L + T + W+ V Sbjct: 239 SVAAQVPTEVAALTETEQAVNVLQAMQTEASNQAEEPTQTAVEEELRIEITGAESWITVR 298 Query: 269 DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLT 328 A K+L + + L+ Y+L +GAPA V+I Y+G+ V L +VAR Sbjct: 299 TAQNKRLAERLYKAGEVLSFNDNEQYRLTVGAPANVKIYYKGQVVPLK---VDGRVARFK 355 Query: 329 LNAEQ 333 L + Sbjct: 356 LPLAE 360 >UniRef50_Q57065 Uncharacterized protein HI0367 n=17 Tax=Pasteurellaceae RepID=Y367_HAEIN Length = 303 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 125/328 (38%), Gaps = 27/328 (8%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLASTFLRGY 64 + L+ G R RE L LS + VA+ + L+ S + +E ++ + F++GY Sbjct: 2 NPTTEQVLSPGEIFRQTREALNLSLEDVAKEITLRPSILEQLENNEFIQKSTPAIFVKGY 61 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +RSYA+ + + + + + + +S + + W+ T +V +V Sbjct: 62 VRSYAKFLRL-PDSVWENIVFAETEKNDLGKNARSTRAVNQYSSHNRWIGRLTAIVFMIV 120 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 IG++G WWWQ + +E + A +N V S T P + P S Sbjct: 121 IGMTGLWWWQSYQQNTQERDDLVQSYVASTENNQPATALVTTEESNKTVP--ETAAPVSQ 178 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 TN P + ++ + P + + + + Sbjct: 179 PVEITNNLLPEIAQE-------------------NSVSQPKNDEKSVSEIQSAVENPSIS 219 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 T P+A + ++ T W+ V D L ++ L G + L +GAP+ V Sbjct: 220 PTLPIAKGDLVIEILTNSSWISVKDNARHVLAQKEYKQGEILTFNGNE-FSLIVGAPSNV 278 Query: 305 QIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +I Y+G+ L +VA+ L+ Sbjct: 279 RITYKGENYPLK---VDGRVAKFKLSQP 303 >UniRef50_C9KPY7 Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY7_9FIRM Length = 311 Score = 173 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 102/315 (32%), Gaps = 10/315 (3%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR ARE+ GL+ + + + ++ + IE+ + + +G+IRSYA + + Sbjct: 2 LGDTLREAREKQGLTYKDIEKGTSIRALYIEYIEKGEYDELPGDVYTKGFIRSYANFLKL 61 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 L+ + AA A + + K + Sbjct: 62 DANALVQAFTAERHKGAAPAAQQKPSAPKAAPVKPQAKKP-------AAKPVEKVENVAK 114 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 KA++ E T ++ + + + P T+ P + A Sbjct: 115 AEKAEKVEKTASEQPAAPKQEAAPRKAPVQPKATAVKPQPKQQPKKAPASKPAAPRFTAQ 174 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 P + V + + + A D Sbjct: 175 DFNEPKRSNGKLIAIVAIVLVVLAGAVYALSGSDDSAKKPATQQTQQVEAPAPKTYDGVE 234 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + FTADCWLEV A GK ++ G +K + G +++G AV GK D Sbjct: 235 VTATFTADCWLEVK-ADGKTVYEGTLKKGDSQTWKGTDKVTVRVGDAGAVSFSVNGK--D 291 Query: 315 LSRFIRTNQVARLTL 329 L +T QVA T Sbjct: 292 LGTAGKTGQVANKTF 306 >UniRef50_Q1H0U8 Putative uncharacterized protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0U8_METFK Length = 300 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 76/336 (22%), Positives = 131/336 (38%), Gaps = 42/336 (12%) Query: 1 MNTEATHDQN------EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA 54 M+ + + +Q G L ARE LGL + VA RL L + V+ +E D A Sbjct: 1 MSEQDSPEQELQAAPASIDRIGPTLVAARESLGLGAEDVANRLRLSLRQVQALENDDFAA 60 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM 114 + RG+IR+YARLV+I LL + P++ ++ + S ++ + W Sbjct: 61 LPEAVITRGFIRNYARLVNIDAAPLLRVYSQYVPVQDSQAISIPSANIVISGEAGAPW-R 119 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 + W + +V+ ++G + D + T +++ A +S E P + + Sbjct: 120 PYMWFGILLVVLMAGWVLYVDFYQAHDPDTGLSEAIVAPISDKDELISGKPEAEALASPD 179 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 P PA AT Sbjct: 180 PMPPAP----------------------------------TDEPAAVEQPAAVPATPSAV 205 Query: 235 AAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPY 294 P Q + P A+ + T W+ V+DA GK++ S + +TG+ P+ Sbjct: 206 EITPPIAQPALALPAAEDARIKFTVTEATWVSVSDANGKQIMSKTLEPNSEEVVTGKPPF 265 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++ +G +++Y PVDL+ + + N VARLTL Sbjct: 266 RIVVGNIHGTKLEYNNNPVDLAPYAKVN-VARLTLE 300 >UniRef50_B3PDM0 Putative DNA-binding protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDM0_CELJU Length = 314 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 28/337 (8%) Query: 1 MNTEATHD-----QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPAD 55 M E + + L+ G L ARE+ GL+QQ A+ L + + VR +E D Sbjct: 1 MTAENQSEANVSKSSHELSPGTILAAARERAGLTQQQAADELYMTLGKVRALEADDYQRL 60 Query: 56 LASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMT 115 + TF+RGY+R+YA L+ I ++++ ++QA Q + W Sbjct: 61 HSDTFIRGYLRAYANLLKIDVDQVIQAYDRQAQRL---GLVEQYVPRSVDNSNKKIWQFV 117 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 L VV+ L W++ +RKA + + D + S+ + + S Sbjct: 118 GLILAALVVLWLISVWFFDNRKAPEYPLPAALDIAEDIAVSSGQVSSLAQIPLSVQ---- 173 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 PA+VD +T++ + V A +V S + + + + + Sbjct: 174 -----PAAVDVASTSSLSGMVPVSAGVASSAALSVASATSVSESVSVSSVAALSRRTVVQ 228 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 P + + L M F+ +CWLEV+D+ G L + ++R L + G+AP+ Sbjct: 229 DPNAQNL----------DELYMEFSDECWLEVSDSRGDVLATELERPGNRLLVKGRAPFD 278 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +K+G AV + G+ V + TN V + + A+ Sbjct: 279 VKLGNAKAVTMTLNGQSVTIIPSPHTN-VLTMKVGAQ 314 >UniRef50_D0KWA6 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWA6_HALNC Length = 380 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 83/351 (23%), Positives = 132/351 (37%), Gaps = 21/351 (5%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 D + + GA ++ AR GLS +A+ L L + V +E ++ ++R Sbjct: 30 ETTALDVSNRKSLGALIQEARTAKGLSAADLAQSLNLDLKIVERLEANQFEGGPEPIYVR 89 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG----------- 111 Y++ +A +V + L + Q A + + + Sbjct: 90 AYLKHWAGIVGADPQVWLQAYQLQHGGNVAPNKIGVTAPIEVMTAHKTSHTVHSTNQNNV 149 Query: 112 ---WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNT 168 L LV+ V+I A + + + + + + G +V L Sbjct: 150 GRTILRWLLALVVLVIILAVIAIALPSVWQKGLSLLSGKQEQTPLTLNGETSGSTVSLPV 209 Query: 169 STTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 T + P +V T TN P P V P N S + T TPA T Sbjct: 210 QPLPALNTPAEPSKAVTQTTTNEAPPPPPLATPLVAPAANDSASTPPSVTSTTNTPAQTE 269 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNA------LVMNF-TADCWLEVTDATGKKLFSGMQR 281 TTPD AA A T A LV+ +ADCW+EV DA GK+L + + Sbjct: 270 PTTPDTAASTTPTPADATPAEQTAPAAAPNANLVIKVDSADCWVEVRDAAGKRLVYDVIK 329 Query: 282 KDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 K + G P+ + +G P+AV + ++G+PV L T V R T+ Sbjct: 330 KGEERTVPGAGPFTITLGNPSAVTVLWKGEPVKLGAPNSTTGVIRTTVGGS 380 >UniRef50_C9S0F6 Transcriptional regulator, XRE family n=7 Tax=Geobacillus RepID=C9S0F6_GEOSY Length = 297 Score = 172 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 97/323 (30%), Gaps = 31/323 (9%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G RLR ARE+ +S + E ++ + IEE + ++R +IR YA Sbjct: 1 MTELGKRLREAREEKKMSLDELQEMTKIQKRYLIGIEEGNYAIMPGNFYVRAFIRQYAEA 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 V + +EL ++ P P + R++ WL Sbjct: 61 VGLDPDELFEQYKQDIPQSYQDDIPQTLSRVKTRQQLSAEGAKWLDWL------------ 108 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 A + + V L +P T ++P + ++ Sbjct: 109 ---------------PKVIVAAVVIGAAVLVWVLLQHGAANEPPTKTSPKTAEVEKPKHS 153 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 PA + + A Q N A T + A + + Sbjct: 154 PLEQAKQKQPAKETDEKATNENGQQNEQPAPTGEEEQPGAAMNVTEKRGNTATIEVASSG 213 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL--TGQAPYKLKIGAPAAVQIQYQ 309 ++ ++ W+EV + G + G + ++ +KIG V ++ Sbjct: 214 AFSIELSSKGTSWVEVYNTKGHTFYRGNLTSGQTKTFDLSAESEVWVKIGRTLDVDMKVN 273 Query: 310 GKPV--DLSRFIRTNQVARLTLN 330 G+P + Q L Sbjct: 274 GQPFAYPFAPKEEVYQKLHFVLK 296 >UniRef50_A4JEP1 Transcriptional regulator, XRE family n=6 Tax=Burkholderia RepID=A4JEP1_BURVG Length = 337 Score = 172 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 116/324 (35%), Gaps = 12/324 (3%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 G+RL RE G + V+ RL + +R +E TF G +RSYA Sbjct: 23 ETLAAVGSRLAQLREAKGWTVDDVSARLKVAPQKLRALEAGDISHLPGVTFALGVVRSYA 82 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 +++ + E L ++ + ++ S R + L + + Sbjct: 83 KMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGSSS---------GHH 133 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 W W I + + + +S + + + S A+ + A Sbjct: 134 PWLWGTAIVVVAVIAVLMWHTGGDSASWLARFKGAAAEHAPAASAVAASAASAAEEPAAG 193 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 + T A A A + + AA + AA + + V Sbjct: 194 SASTAAGNEVVAASAVVAQASAPVAASVAAPAAAAPASQPAVVPAAASAASAAEPASVAV 253 Query: 250 ADPNALV-MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQ 307 A ++V + DCW V D GK+LFS + R + G P+K+ IG A + + Sbjct: 254 AAGQSVVELKVRQDCWFSVRDKNGKELFSALVRAGETKQVAGDGPFKVTIGNKAGLDAVA 313 Query: 308 YQGKPVDLSRFIRT-NQVARLTLN 330 + GKPVD +++ VAR TL Sbjct: 314 FDGKPVDPAKYSAARGNVARFTLP 337 >UniRef50_A6EWG5 Putative uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EWG5_9ALTE Length = 349 Score = 172 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 145/348 (41%), Gaps = 18/348 (5%) Query: 1 MNTEATHDQNEALTT-GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M+++ + G L+ AREQ GLS AVA+ L+ + ++ IE+ K + Sbjct: 1 MDSDDAQQPSSLNEPTGQLLKRAREQKGLSVSAVADAQHLRPAVIQAIEDGKYEQIDSEL 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQA-PLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 FL+GY+R+YAR V + + ++ L+++ PLR KV ++ L ++R Sbjct: 61 FLKGYVRTYARQVDLDPDAVIATLDEELEPLRQQKVQAEEANPLIDIERRRRRKRRVAKL 120 Query: 119 LVLFVVIGLSGAWWWQ-------DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 L+L + I + + E + +SA+ E + Sbjct: 121 LLLMLAIAVIAFLALRFTGELDGITGDTAEPTVSSEPNASAQPEPTEEMASVDGTVDTEL 180 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAP----- 226 ++P T + VD + + + SP+ + +A A Sbjct: 181 SEPGTEAALSEPVDEASIVEDNNELAGLPEQPQVNEPDSGSPAPVVEEDSAPAAQPAAEE 240 Query: 227 ---TAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD 283 + ++ T L M F+ +CW++VTD+ G +L +QR Sbjct: 241 VDVSRVPVVTSEPEPAFQESAQPTAAVGSARLEMTFSDECWVQVTDSAGNRLVGSLQRDG 300 Query: 284 GNLNLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 +N++G+ P + +GA A++ I++ G+P+DLS + N A TL+ Sbjct: 301 DRINVSGRLPIDVVVGAVDAIESIRFDGQPIDLSGYRVVNNRAEFTLD 348 >UniRef50_Q0AE41 Putative uncharacterized protein n=2 Tax=Nitrosomonas RepID=Q0AE41_NITEC Length = 358 Score = 172 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 68/333 (20%), Positives = 117/333 (35%), Gaps = 35/333 (10%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 G RLR+ R + G++ VA RL L + IE A+ FL Sbjct: 57 TDTEKTGGAATPNFGQRLRDERIRRGMNIGEVAHRLRLSEQQIEAIEAQDFSRLPAAVFL 116 Query: 62 RGYIRSYAR-LVHIPEEELLPGLEKQAPLRA--AKVAPMQSFSLGKRRKKRDGWLMTFTW 118 RGY+R+YA L L+ + + P + P Q F + + D + Sbjct: 117 RGYVRNYANLLQLDDTTLLVEAVPQSRPADSVFTSKNPSQRFKAIEPVYQSDRGGRSGWL 176 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 L + V++ A+ + + ++ M ++ + Sbjct: 177 LYVAVILAAFAAYGFYHEEIPEKMAPYMLNEGDQVI------------------------ 212 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 + ++++ V +V SP + P AA P AP Sbjct: 213 -------QSGSSSENDQVAIDLALPLSPTASVSSPMAPPASASVNLPPAAAVLPALPAPS 265 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 P +L F+ D W+++ D+ G+ + + + + G+ P L I Sbjct: 266 APVADTAKAPDNGKKSLHFVFSKDSWVKIKDSNGQIILEKINSRGTEQTIEGEPPLYLVI 325 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTN-QVARLTLN 330 G A V + Y G VDL+ + R N VAR +L Sbjct: 326 GNAAGVSLTYNGHKVDLAPYTRGNDDVARFSLE 358 >UniRef50_C0GM52 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GM52_9DELT Length = 297 Score = 171 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 100/320 (31%), Gaps = 27/320 (8%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 E G +L R + GLS + V + + ++ ++ +E+ + +G++++YAR Sbjct: 2 EMQELGRKLYEERTRRGLSLEQVQDETKISLNFLKALEDGDVEQLPHPVYAKGFMQNYAR 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + + + K + + ++ K +K+ + T V+ + + + Sbjct: 62 FLGLDWQSMGEEFSKIYHAEEETESLEELPTVLKEQKEARLFSYTVKASVIILALVIIVG 121 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + W + QEE AE + Q PL D A T P Sbjct: 122 FGWFLYSSFQEEPAQEEQAELAEEIPEYDHVQEEPLEDDILEDRAVTPEEP--------- 172 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 V + T D A + Sbjct: 173 --------------EIPGDAVPQEDVLLREDVDELQPRVTQLDLEAFAVEPDEPEEEEIP 218 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 D + + +CWL + R ++ + L++G V I G Sbjct: 219 DTVLVHIEAHEECWLMYETDDESR--DHFLRPGDSIEVEYTGSMSLRLGNAGGVSISLNG 276 Query: 311 KPVDLSRFIRTNQVARLTLN 330 +P DL + +V L N Sbjct: 277 EPYDLDA--ASGEVKTLEFN 294 >UniRef50_C6WV26 Putative uncharacterized protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV26_METML Length = 357 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 120/342 (35%), Gaps = 24/342 (7%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 + + GA L+ AR+ LSQQ V++ L V V +E D + RG+IR+YARL Sbjct: 17 SASLGAVLQAARDAKKLSQQDVSDSLRYSVKQVDALERDAFDLLPDAMITRGFIRNYARL 76 Query: 72 VHIPEEELLPGLEKQAPLRAAK-VAPMQSFSLGKRRKKRDGWLMTFT--WLVLFVVIGLS 128 + I LL + +P+++ +A S + K WL LVLF ++ Sbjct: 77 LEIDAAPLLDIYRQLSPVQSPSLLAVNPSMQPVQLTKDNTPWLTYILGSILVLFFLLAWF 136 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSV--------------------PLNT 168 + +A+ + + Q + P + Sbjct: 137 VYIEYLPHQAKIADEAAPQVAAPVAEQPADTQSATEVTLPEAALPEAALPAAERQFPEDA 196 Query: 169 STTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 D + A+ A + V S A V A + Sbjct: 197 VQGQDTGLANGAVANAQPATPVIAPVQPATAATPSAQVSSVQVPVSPAPVKAEAPAKVES 256 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 P+ A A + M T W+ V+D G+ L+ +L Sbjct: 257 QIKPESKANPELKVKPELQTSAGLKKVGMTATEKSWVRVSDKAGQILYEATLNAGDTQSL 316 Query: 289 TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + Q P+ + IG A + G+ +DL+ + R N VAR++L Sbjct: 317 SFQTPFNVVIGNAKATAVNVSGQAMDLAGYTR-NNVARISLE 357 >UniRef50_A3WP02 Predicted transcriptional regulator, contains N-terminal xre-type HTH domain n=1 Tax=Idiomarina baltica OS145 RepID=A3WP02_9GAMM Length = 387 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 41/369 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+++ + G L+ ARE ++ + A+RL L++ + IE D +TF Sbjct: 22 MSSQEQS-RRPIAGPGHILKEAREAKSMTPREAADRLRLRLQVIELIEADDYDTFSTTTF 80 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++GY+R+YA+L+ + + ++ + +R + PMQSFS + ++ D LM TWLV Sbjct: 81 VKGYLRAYAKLLGVDQSKIDEAYKSLN-IREPESTPMQSFSRRVKHQESDNRLMMITWLV 139 Query: 121 LFVVIGLSGAWW-------------------------------------WQDRKAQQEEI 143 + VVI L WW ++ + Sbjct: 140 VVVVIALVIWWWQDSDLSFSKLSNDVEQAVTEQTDSAQQEDSTDTPTLRQSNQAQEATSS 199 Query: 144 TTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAV 203 +S + S P T P A + T++N Q + A Sbjct: 200 EQPLLESEVSAADASTSLSINDPAQQDEMSPDTIEQPVAEMPETSSNQQVTSEAMSEVAQ 259 Query: 204 DPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADC 263 + N A +TA+ P PT + + D A + A LVM F+ +C Sbjct: 260 ESDANEPRETRTAEQNTASEPEPTVSASSD-ANSVSGGDEDEADNTALAADLVMEFSEEC 318 Query: 264 WLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ 323 W++V DA G+ G + + + + G+AP+ I PAAV I Y G +DLS + R ++ Sbjct: 319 WVKVEDADGEVQAIGTKAQGYRMPVPGKAPFSATICKPAAVTITYAGNALDLSNY-RQDR 377 Query: 324 VARLTLNAE 332 VARLT+ + Sbjct: 378 VARLTIPSS 386 >UniRef50_B8GTN5 Transcriptional regulator n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTN5_THISH Length = 325 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 81/327 (24%), Positives = 127/327 (38%), Gaps = 16/327 (4%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 GA LR ARE GLS +A RL L V + D+E D+ + ++RGY+ Sbjct: 11 QEPVRRVPGPGAELRRAREAAGLSTGELASRLHLGVGLIEDLEGDRYDSLPQPAYVRGYL 70 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF--TWLVLFV 123 R+ AR ++I L+ + Q P G R + L+L Sbjct: 71 RAAARALNIDAAPLIEAYDAQGLSEPKLDVPPAVARSGVAPANRGHRRAPYLLGLLILVA 130 Query: 124 VIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPAS 183 + GL W++ + + L T +P + P A+ Sbjct: 131 LAGLIAYGWFEGQDVLTGARD-----------EEPTTRAPLALQTPAPPEPVLRAEPDAA 179 Query: 184 VDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA 243 + A P + A + P+ + V A + A P A A Sbjct: 180 IPDAAIPETRPPLAGDAEPLLPETHMPVEEPPA---ASLPVPTPAPPPPAPRAQPAPAPA 236 Query: 244 GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAA 303 T P A+ + LV+ F D W+E++DA G+ L G+ R+ L G PY++ +G Sbjct: 237 PATPPAANGSVLVLRFAEDSWVEISDARGESLLVGLMREGTERRLEGVPPYRVFLGNAPG 296 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLN 330 V+I++ G D +R RT+ AR TL Sbjct: 297 VRIEHDGSSYDAARHARTDNTARFTLE 323 >UniRef50_C4KCN7 Transcriptional regulator n=1 Tax=Thauera sp. MZ1T RepID=C4KCN7_THASP Length = 322 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 72/306 (23%), Positives = 116/306 (37%), Gaps = 13/306 (4%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 G S A + L + +E D A F+RG+ R+YAR + + LL G+E Sbjct: 28 GESVHEAAFAIKLSPRQIEALENDDFAALPGMAFVRGFARNYARYLGLDATPLLDGIEHL 87 Query: 87 APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEI--T 144 A ++P+++ +V+ +++ L G W+ D + Sbjct: 88 AGAGQPDLSPIRNADGDLPAGGGGRRGSFPAGVVVALLLVLLGVGWYFDWFRTEPLPGLE 147 Query: 145 TMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVD 204 + + A + + +E G + P + PA + + AV A P Sbjct: 148 LQTEPAPAFMPAPTEGGGAAPATSEPVATPAPLEASAPAAPHASPVAIPAAVGAGVPVTP 207 Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 A +P + + + A V A N L F D W Sbjct: 208 LAAPASATPPASASAIVSPVVQSPAQAA----------TPVAEEGAGGNRLSFRFGGDSW 257 Query: 265 LEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 +EV DA+G L SG R + + G P++L +G A V ++ GK VDL+ R V Sbjct: 258 IEVRDASGTILHSGTNRAGSSRVVQGTPPFRLVVGNSANVVLEQDGKAVDLAAHTR-GSV 316 Query: 325 ARLTLN 330 ARLTL Sbjct: 317 ARLTLP 322 >UniRef50_UPI0001C42506 hypothetical protein BpOF4_19605 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42506 Length = 300 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 93/312 (29%), Gaps = 39/312 (12%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G LR ARE+ GLS + + ++ + IEE + + R ++++YA V Sbjct: 3 ELGQHLREAREEKGLSLEDLQRSTKIQKRYLLAIEEGRFDTLPGLFYARAFVKTYAEAVG 62 Query: 74 IPEEELLPGLEKQAPLR-------AAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 + E L + P ++ +S ++ + + + F+V+ Sbjct: 63 LDPEPLFDQYRNELPNPQKESIDLPSRSERSKSPVRQPKKSSKAPAFLPAVIALAFLVVI 122 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 G W QS+ P A Sbjct: 123 ALGIWL---------------------------VTQSIGGERDAAIAPDPEENVDADFSE 155 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 AT P A N + V+ T++ T + Sbjct: 156 GATE---PEADEEAEGDQEAANEDAVEEEPAVEEEEEEEETSSETSTLNLLNSSGNTSYF 212 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN--LTGQAPYKLKIGAPAAV 304 AD +V+ F+ +++V + G FSG L G+ + GA V Sbjct: 213 ELEADRFDVVIQFSDSSYVDVKNGLGNMFFSGQPASGEELEYDFQGEEEVEFNFGASQNV 272 Query: 305 QIQYQGKPVDLS 316 + + VD Sbjct: 273 TLIVNDEEVDFP 284 >UniRef50_Q3SL71 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL71_THIDA Length = 291 Score = 170 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 114/319 (35%), Gaps = 33/319 (10%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 LT G LR ARE G++ + RL L V +E D A F RG++R+YARL Sbjct: 6 QLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVRNYARL 65 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + E LL +E AA + +R W++ +VL V+ G + Sbjct: 66 LGLAPETLLASME---GAPAAPAEVSYAKPPLQRPWFASSWVILLALVVLVVLAVPVGLY 122 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 W + ++ +A + + P + P AT+ Sbjct: 123 LWLNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGEAPAETPGAPNAPAPVEGNGATDG 182 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 T T P D T Sbjct: 183 TTADGTVAVPP-----------------------------QSPPDEAAEDAGSTTEASTG 213 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 AL + F A+ W E+ DATG+ + + ++ + G+ P+KL IG A ++ Y G+ Sbjct: 214 GAALHLEFGAEAWAEIKDATGRAVLRQLNPAGSSVEVKGEPPFKLVIGNAAETRLTYNGR 273 Query: 312 PVDLSRFIRTNQVARLTLN 330 PVDL VAR TL Sbjct: 274 PVDLKPHTGM-TVARFTLE 291 >UniRef50_Q1LLJ0 Transcriptional regulator, XRE family n=2 Tax=Cupriavidus RepID=Q1LLJ0_RALME Length = 351 Score = 170 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 123/337 (36%), Gaps = 21/337 (6%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 + + A GA+L++ARE LS + V+ RL + S + IE + TF +G + Sbjct: 24 SDREAVAREIGAKLKDAREAQRLSLEDVSARLKVAASKLVAIESGNVSSLPDVTFAKGVM 83 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWL----------MT 115 R+YAR + + + LL QA + + Sbjct: 84 RAYARTLQVNIDGLLGRYHAQAQATPVTGITQRHEGALNQAFDDRKRFGSKGTGGGAGGR 143 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 + WLV + + G ++ D E + A + + + E+ Q N T + Sbjct: 144 WVWLVCVLALIGVGGYFGFDHAKAWVEARSKAAAEAPKPAVAEERAQEQSNNDGTVSAAL 203 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 + A + A P + P + A A T A TP Sbjct: 204 PPVMTGNDSPAPSETASASAAQSVAVTPAPATMSAGLPMVTGGEAPAEAAKTPAATPPAT 263 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG-QAPY 294 P + A+ + F+AD W EV D TGK + G + ++ G PY Sbjct: 264 VPAAQGDSA--------GAVQIRFSADSWYEVRDRTGKVILGGTAKAGDTVSGGGAGGPY 315 Query: 295 KLKIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 K+ +G V+ + + G V+ R N VARLTL Sbjct: 316 KIILGNVKGVESLTHNGAAVNFQASNR-NNVARLTLQ 351 >UniRef50_A6GNU8 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GNU8_9BURK Length = 367 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 109/328 (33%), Gaps = 8/328 (2%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 G LR ARE+ G S ++ + + + IE TF + +I+SY Sbjct: 41 ESGQNPGEILRVAREKAGYSLSDISAQTKINERQLEAIESGDVGRLPPETFAKAFIKSYC 100 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKR----RKKRDGWLMTFTWLVLFVVI 125 + + + ++ K A G+ K + T Sbjct: 101 KALKMDPAPVIMSFGFSEASAQVKAARSGQADSGRPEPLEPKMPNSSKRLSTLNFDRKTG 160 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 S ++ + + S + + + P +T P S PA Sbjct: 161 KKSLSYGIVLAAVVVMAVFYIPVFMSGQEAEVVDAEVIEPNEAPVSTAPGAESAVPADGS 220 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPT---AATTPDGAAPLPTDQ 242 + A + QQ A A + + TP A Sbjct: 221 LPLSLDPPAAAGDTSVFPALQQPVTPEGESAPSAAIAPSSSAVVGSTATPPLAETTAPAA 280 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 A + L NF W+ V DA K L S + NL + GQAP+KL +G Sbjct: 281 AAASAASGGEGLLRFNFQEQSWVTVRDANDKVLISQLNDGGSNLEVKGQAPFKLIVGNAK 340 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 AV + GKPVDL+ IR +VAR+T+ Sbjct: 341 AVSVSSNGKPVDLTSSIR-GEVARITVQ 367 >UniRef50_B0THU0 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THU0_HELMI Length = 300 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 97/325 (29%), Gaps = 27/325 (8%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 + G LR AREQ LS + V ++++ + +EE + G++RSYA+ Sbjct: 1 MESLGLVLRQAREQKQLSLRQVEAETNIRLAYLTALEEGNYDLLPGRVYGVGFMRSYAKY 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + L+ ++ + + R G ++ + L V + Sbjct: 61 LGLDPAPLIEAMKHDWKTEEEESPLVTEEREKAYSAPRTGGIVKYAGYGLAVAAIAGLVF 120 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 +S+ + N ++ P T Sbjct: 121 ----------------------VSARLPDKDQLEPNRPDGRVAINSTKPSGPAAADGTGA 158 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + A N + + + P A P A P Sbjct: 159 LGSSGVLGASPGAQASNGAGADPVSLAPGLSPVEPAVAQPAANGEKAPGVPAVAPAPSGV 218 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 L + CW+ V+ G+ + GM + TG+ + +G AV++ GK Sbjct: 219 AVTLRV-VQDRCWMSVSQ-DGQPAYEGMVNVGDAMTFTGKDKVNVVLGNAGAVEVILNGK 276 Query: 312 PVDLSRFIRTNQVARLTL-NAEQSP 335 L QV + Q+P Sbjct: 277 S--LGTLGDVGQVIKEEFVPLTQNP 299 >UniRef50_B5EJF2 Transcriptional regulator, XRE family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJF2_ACIF5 Length = 326 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 118/337 (35%), Gaps = 63/337 (18%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M TE LR ARE G S + VAERL + + V+ +E+ A + F Sbjct: 3 MTTENE--------ISQDLRAAREAHGWSLRQVAERLHITEAQVKGLEDGDYTALPGAAF 54 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RG++++YARL+ + E LL + + + ++ F+ L+ Sbjct: 55 ARGFLKNYARLLGLDPEPLLKTYDASNEGSGLHPSETVLPASEGPLLDYSRRVLIFSVLI 114 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + VI AWW + Q T A+ + S + ++ + S P Sbjct: 115 VISVIA--VAWWVWSHQQLQGLPVTAVSPMVAKHPAASAKVVTIAPSVSAAASVPAIGNP 172 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 PA+ A Sbjct: 173 PAAPGLPVAPVPATRSAA------------------------------------------ 190 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQAPYKLKIG 299 VA L F+ADCW++V D+TGK L + + + L + +G PY + +G Sbjct: 191 --------VATGPGLTFQFSADCWVQVKDSTGKTLLAVLGHRGDVLRVDSGTPPYNVLVG 242 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 +A+ I Y K V L VARL + A A Sbjct: 243 KASAITISYDDKSVPLPA--NALGVARLQIGATPIVA 277 >UniRef50_Q15R55 Transcriptional regulator, XRE family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R55_PSEA6 Length = 345 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 83/345 (24%), Positives = 152/345 (44%), Gaps = 17/345 (4%) Query: 1 MNTEATH-DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M+ E H ++++ G L+ AR + GL+ + +A + LK S + +E D+ ++ T Sbjct: 1 MSEEVQHMEESQVFGPGPVLKAARLEKGLTVEQIAGLIHLKPSLIIALENDEYDPSISMT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 F++GY++ YAR V + E ++L GL+ + A +QSFS + D LM T+L Sbjct: 61 FIKGYLKLYARQVDVSEAQVLDGLDN-LDTHKKEPAKLQSFSRRVAHQANDDKLMLVTYL 119 Query: 120 VLFVVIGLSGAWWWQDRKAQQE-----EITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 +L +V+ L WW+Q + Q++ + + V +T+ Sbjct: 120 ILAIVVALVVVWWFQQGDNETASTLDTPTVQSEAQNNVKSEKPVDIQSDVENDTAVIATG 179 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 + S D T+ P + + ++ T +P P Sbjct: 180 DVNESGLRSTDMAQETTEFPRDEVNQSNEIQPEVSGSLEDSNSILTPDNASPQDGVAPAV 239 Query: 235 AAPLPTDQA---------GVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 + A T + +V F DCW+ V DATG+ + G++ Sbjct: 240 TVNSESASAQLNPQVSASAQTEQTGELVDVVFTFNDDCWVSVIDATGETIAVGVKVAGRV 299 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++++G AP+++ +GAP+ VQI+Y + +D+S F+ N A+ TL Sbjct: 300 MSISGVAPFEVILGAPSVVQIRYADEDLDMS-FLAPNSTAKFTLP 343 >UniRef50_B2U9U8 Transcriptional regulator, XRE family n=6 Tax=Ralstonia RepID=B2U9U8_RALPJ Length = 360 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 131/335 (39%), Gaps = 10/335 (2%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + + RLR RE+ L+ +A RL + + +E A TF +G Sbjct: 27 SPERDDALREIAERLRAGRERQRLTVDDLATRLKVAPGKLLAVESADVSALPDMTFTKGL 86 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPM----QSFSLGKRRKKRDGWLMTFTWLV 120 +R+YAR + + ++ + L +AP+ + P +SFS KR G + Sbjct: 87 MRAYARALQVDVDDQVARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGNGRWLIGA 146 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQG-QSVPLNTSTTTDPATTST 179 L VI +GA DR Q T A Q++ + + Q+ P + T+ A + T Sbjct: 147 LVAVIVAAGALAGMDRLKQWFATQTAATQNTESTAKETPAAEQTAPAQVAPATEQAPSET 206 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAV---VSPSQANVDTAATPAPTAATTPDGAA 236 P AS+ T T A + A A A Sbjct: 207 PAASMPTPLTPVTPAAPASGVVTAPLAPPPTLPRSDNGAVPAPAVAAAGGKPAVINVEAP 266 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 + ++ + F+ W E+ D TGK L SG+ ++ +LTG P+K+ Sbjct: 267 VAALPTEAAKPAESGGGSVSVRFSGSSWYEIKDKTGKTLASGISKEGDARDLTGTPPFKV 326 Query: 297 KIGAPAAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 G AV+ + G VDL ++ R N+VAR TL Sbjct: 327 VFGNAGAVESLAVGGATVDLQKYAR-NRVARATLP 360 >UniRef50_Q0A987 Transcriptional regulator, XRE family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A987_ALHEH Length = 325 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 80/342 (23%), Positives = 124/342 (36%), Gaps = 29/342 (8%) Query: 1 MNTEATHDQNEA---------LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDK 51 M+++ + T G L ARE GLS++A A+ L L + T+ +E D Sbjct: 1 MSSDHDSPLSPDHERDPGRGGETPGQLLARAREARGLSRKAAADALNLPLRTLEALEGDD 60 Query: 52 APADLASTFLRGYIRSYARLVHIPEEEL---LPGLEKQAPLRAAKVAPMQSFSLGKRRKK 108 TF++GY+R+YA+L+ I + L L L+ + P A+ P Q + Sbjct: 61 YDNLPPLTFVKGYLRAYAQLLEIDSDRLREALARLDLERPASGAQQQPGQGSTSVTGGDT 120 Query: 109 RDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNT 168 G L G W + + + P Sbjct: 121 SRGGLQ-----------GRRLRGWLLGVSSVVVAAVIAVLAWLWLVENGVSGDSEAPPVA 169 Query: 169 STTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 T P+ + A V T P + A V + Sbjct: 170 EEGTAPSEEAPAEAVVADELAER-----TLPEAVDEVVPEASVPDDTGADVSVPETLEPP 224 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 A P P P +P LV++ + WLEV D G++L G + + L Sbjct: 225 VVPEVEAEPEPAVAEPEPEPAPEPAGLVLHISGTTWLEVRDEDGERLMVGNYQGEETHQL 284 Query: 289 TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 G+ P+ L IG AV++++QG VDL+ R VARLT+ Sbjct: 285 QGEGPFALVIGNADAVRVEFQGDAVDLAPHTR-GNVARLTIP 325 >UniRef50_C8QXV7 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXV7_9DELT Length = 325 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 117/343 (34%), Gaps = 31/343 (9%) Query: 1 MNTEAT------HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPA 54 M++E T E L G +LR AR G+S + A + ST+R +EE+ A Sbjct: 1 MSSEQTGQHTAEEQMEEGLALGEKLRRARTAKGISLEEAAGATRIHTSTLRALEENNRAA 60 Query: 55 DLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQS-----FSLGKRRKKR 109 ASTF RG++R YA + + +E L K++ L A + R Sbjct: 61 LPASTFTRGFVRIYANHLGLDQEAALRQHIKESGLPEAATTEKVNIHEILAGERMAEPLR 120 Query: 110 DGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTS 169 F W++ +V L+ W + + T +S + + S + Sbjct: 121 ALSGSRFFWVMALLVAVLAVYWGYNSYFRPIAQPTAFPLESVFDQAQPEATPSSPATQAT 180 Query: 170 TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA 229 +T + P T PA A +Q A A + Sbjct: 181 ASTPEPLPAPPEQPAVATQPPPAAPAPLTAARPPADRQPAPAGAESTPQPEAPALSQAPV 240 Query: 230 TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWL--EVTDATGKKLFSGMQRKDGNLN 287 + A + L F D W+ ++ ++LF + + Sbjct: 241 PSHPANAEA-------------SHVLEARFVEDTWVRLQIDQEPARQLF---FQPGESRT 284 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +L+IG V++ Y G+P L R+ QV L+ Sbjct: 285 WKAVEQLELRIGNAGGVELSYNGEP--LPPLGRSGQVTDLSFP 325 >UniRef50_D1CBL2 Putative uncharacterized protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBL2_THET1 Length = 312 Score = 168 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 96/314 (30%), Gaps = 17/314 (5%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G LR+AR GL+ + V++ + ++ ++ +EE++ + + + ++R YA Sbjct: 1 MQDIGEALRDARLSKGLTYEYVSQIIKIRPEFLKAMEENRFDLLPGAFYAKNFLRRYADF 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + + L+ + ++ + G + L+ + + G Sbjct: 61 LGLDSDALVESFNELEAAHEQHISAAANTVSKGHISPSFGAIAVALVLIAAIAVLAYGVV 120 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 K E I T + + ++ + + + T + STP T T+T Sbjct: 121 VSPRNKHVAEVIPTPSIFPTIPPTTPTPTVSRIVNVPTPTLVSQSKSTPTVQPSPTPTST 180 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + D +Q+A S + + A + + Sbjct: 181 PNNSQKTAGNNEDKRQSADNQRSTDKRKNQRSHKTRKESKKKVAGNVIAHIKTLAIGNV- 239 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG- 310 V A G +FSG + + + + + G Sbjct: 240 ---------------VVRADGDVVFSGTMKPGQEKDFGAYNQLYIYSNNAQNLLVSVNGC 284 Query: 311 KPVDLSRFIRTNQV 324 L ++ V Sbjct: 285 SAKTLDQYGCPGCV 298 >UniRef50_C6NZ97 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ97_9PROT Length = 344 Score = 168 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 110/337 (32%), Gaps = 13/337 (3%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 E L G LR REQLG+S +AER+ V +E + FLR Sbjct: 12 KENISPLQSKLDVGLTLRQTREQLGMSVHDIAERIKFAPRQVEALEANDFEHLPEPAFLR 71 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G++RSYAR++ + + L+ L + + + R +M WLV Sbjct: 72 GFVRSYARVLQLDDVALVASLPSAPGKQVTIKTQAVNVPFPTLQSLRRINVM---WLVGA 128 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + + L W+ K + S L + + + Sbjct: 129 LGVALVLGWFVLMHKVDTTVKSAKVVVESVPLPATETAVSAPADTGAQPVAAEPAGIIER 188 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA-------PTAATTPDGA 235 + T P + A + PA + Sbjct: 189 EKQHASVETAEPEKRHESATATEADKTAKPAKVAEPEKKPEPAKIKQHEVKALPQIDAAS 248 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ--AP 293 AP + + + L FT W EV D+ G L S + + G P Sbjct: 249 APAVAVKTEIPLEILKRRPLHFVFTESAWAEVIDSHGAVLLSRNNPRGTEKWIGGPRHEP 308 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Y + I P V++ Y+G+ VDLS + + VA L + Sbjct: 309 YDISISHPEHVKLYYRGQEVDLSAYAGMD-VAHLKVE 344 >UniRef50_Q13X27 Transcriptional regulator, XRE family n=26 Tax=Burkholderia RepID=Q13X27_BURXL Length = 370 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 125/335 (37%), Gaps = 14/335 (4%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 + GARL RE G + + V+ RL + +R +E +TF G +RSYA Sbjct: 36 DSLAAVGARLTQLRESKGWTIEDVSARLKVSAIKLRALESGDISHLPDTTFALGVVRSYA 95 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK-------RDGWLMTFTWLVLF 122 +++ L ++ + A ++ S R + ++ W V Sbjct: 96 KMLGADPTPFTAALRREKGVAAPDLSMPASSGKDLPRGRVSLSLGGSGQKSRSWLWGVAA 155 Query: 123 VVIGLSGAWWW----QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 V++ + W D A + A+ ++ + S S T S Sbjct: 156 VIVAVIALGMWHTNGGDSSAWLARLKASANGAAGGATGASGAVAQGQAAGSEVTAGEAAS 215 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 TP A V + TP A P V+ + A + AA A + Sbjct: 216 TPDAQVAAENPASATPMPAPLATGTTPSSAPAVTATAAAPKAGSQAQAAAAPGASAPAAV 275 Query: 239 PTDQAGVTTPVADPNALV-MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 + T A A+V + T D W V GK++FSG+ +TG AP+++ Sbjct: 276 VAGASAATVAPAAGEAIVALRVTQDSWFSVRGQDGKEVFSGLVHAGDTKEVTGVAPFRIT 335 Query: 298 IGAPAAVQ-IQYQGKPVDLSRFIRT-NQVARLTLN 330 +G A ++ + G+PVD S++ VAR L Sbjct: 336 VGNKAGLESLTLDGQPVDPSKYAAAKGNVARFALP 370 >UniRef50_Q0VND9 Putative uncharacterized protein n=2 Tax=Alcanivorax RepID=Q0VND9_ALCBS Length = 301 Score = 167 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 113/317 (35%), Gaps = 25/317 (7%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G R R ARE G++Q A+RL L ++ ++ ++ D +TF++GY+R+YARL+ + Sbjct: 9 PGERCRRAREAQGMTQTEAAQRLHLSLTYLQSLDADDYERLPEATFVKGYLRNYARLLGL 68 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 P EE+ ++ A L+L + AW Sbjct: 69 PAEEIAGTFQQMVNEDALDKP-----------------------LLLPSIAPPPAAWLKP 105 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 A + + S ++ ++ Sbjct: 106 LLIALALVVLVSLLWAFWPSKGELPALPDKVQEMSQQSEAEADASNNDMGVQRQAQFDDE 165 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A +A + + T D D + Sbjct: 166 MAGVTQGASLNGTDATDEGRPQAAAESISDITTEDVGNDDGQLQNNDDVSSMLAANGLDR 225 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV-QIQYQGKPV 313 L ++FT++CW++VTDA G+ L G Q +L L G+AP+ L +G AV ++ GK V Sbjct: 226 LSLSFTSNCWIKVTDANGRTLRQGEQSGGASLMLDGKAPFNLTLGNAGAVDELLVNGKAV 285 Query: 314 DLSRFIRTNQVARLTLN 330 L +V R+++ Sbjct: 286 TLPTDSP-GKVVRISVP 301 >UniRef50_A6CQ51 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQ51_9BACI Length = 304 Score = 167 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 96/308 (31%), Gaps = 33/308 (10%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 GARL+ ARE G S + ++ + IEE ++R +I+ YA Sbjct: 4 LTELGARLKEAREAKGYSLDDLQNMTKIQKRYLMGIEEGNYDMMPGKFYVRAFIKQYAEA 63 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQS-FSLGKRRKKRDGWLMTFT--WLVLFVVIGLS 128 V + E + P+ P S K + +M LV VIG Sbjct: 64 VGLNPEMIFEEYSNDIPVTNTGDLPELSRVQSRKPVSQSSSKVMNVIPRILVALFVIGAI 123 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 W+ + + + + +S + + + A D+ Sbjct: 124 FVVWYLLPNQIGNDNA----GTDDTQEESVDYSESDEVQQPDDESGDSEESTDADSDSEG 179 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 + T + P +P Q V A + + Sbjct: 180 SETGQSEEESEEPVEEPSQEITV------------------------ANVSGKETTYELK 215 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT--GQAPYKLKIGAPAAVQI 306 D L ++ T D W+ V ++ ++LF+ M ++ + +G +A I Sbjct: 216 NTDDFNLEISATGDTWIGVYNSKDEQLFNQMMKEGDTQTFELSQDGEAFIVVGNASATNI 275 Query: 307 QYQGKPVD 314 + + ++ Sbjct: 276 KVNEEQIN 283 >UniRef50_C1DD42 Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD42_LARHH Length = 302 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 74/337 (21%), Positives = 123/337 (36%), Gaps = 42/337 (12%) Query: 1 MNTEAT-HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M++E + + G L N R + G+S Q VA+++ L + IE D T Sbjct: 1 MSSEVNPQPSSPLQSAGVVLSNERIKRGISIQEVADQIKLSRKQIEAIEADAYDRLPGPT 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT-- 117 F RG++R+YAR + + LL +++ P A P + + + + Sbjct: 61 FARGFVRNYARFLGLDPVPLLAWMDQNLPSTAVAAHPEPVAPVEPQPEMPQRPAPGSSKR 120 Query: 118 ----WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD 173 + V++ GA W A ++ A Sbjct: 121 GSGRLIGGLVLLAAIGAAGWALFGAIRQPSMPQA-------------------------- 154 Query: 174 PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 A V + AT PA A + AV P+ A A P Sbjct: 155 --------ALVPSEATAEAEPAPPTEEAADPQVEAAVTEPAAPAPAEPAAAPAEPAPAPA 206 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAP 293 + P D A TT + + + + W+ +TDA KL G +++G+ P Sbjct: 207 ASTPASVDTARPTTTDSAAAGIRVQARQNAWVSITDANDDKLVYGEVTAGSERSVSGKPP 266 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 Y++ IG Q+ + G+PVDL+ + A+LTL Sbjct: 267 YRIVIGNAQHAQLFFNGQPVDLASKTK-GSTAKLTLE 302 >UniRef50_B8IZ93 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZ93_DESDA Length = 314 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 11/321 (3%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 GA LR REQ GLS + A L + +R +E + + +G+IRSY+ Sbjct: 3 LEELGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYSAY 62 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 V + EE+ L ++ A Q + L F ++ +++GL Sbjct: 63 VGLSAEEVGAALATL--EANSEEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYV 120 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 WQ + T A + PL+T+ A + PA A Sbjct: 121 AWQQGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARPGPEAARTDSPAGQSGGADLP 180 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 A Q++ VV+ SQA A AP +A P AA + VA Sbjct: 181 AAATAAQAAAPAGAQRSEVVTGSQAAPAAATASAPASAAAPAAAANPE------SIAVAG 234 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 P+ +++ T +CW+ + A RK LT +LK+G V+I+Y G+ Sbjct: 235 PHKVIITATEECWVH-SSADNTDTRQFSLRKGDTFALTFNKSLELKLGNAGGVRIRYNGE 293 Query: 312 PVDLSRFIRTNQVARLTLNAE 332 +L + QV LT Sbjct: 294 --ELPPVGGSGQVRTLTFPPA 312 >UniRef50_B5WST2 Transcriptional regulator, XRE family n=4 Tax=Burkholderia RepID=B5WST2_9BURK Length = 381 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 127/346 (36%), Gaps = 25/346 (7%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 + GARL RE G + + V+ RL + V + +E +TF G +RSYA Sbjct: 36 DSLAAVGARLTQLRESKGWAIEDVSARLKVSVVKLSALEAGDISHLPDTTFALGVVRSYA 95 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK-------RDGWLMTFTWLVLF 122 +++ L ++ + A ++ S R K ++ W V Sbjct: 96 KMLGADPAPFTAALRREKGVPAPNLSMPASSGKDLPRGKVSLSLGDSGHKSRSWLWGVAA 155 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 +++ + W+ S+ +S+ TT +P+ S P Sbjct: 156 IIVAVIALSMWRTNGGDSSAWLARLKASANSSTSSDTAASGAVAQGPTTPEPSGASAPEV 215 Query: 183 SV------------DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT 230 + +AT T P T AP P N +P+ + A Sbjct: 216 AATADNAANTDNAASASATPTPAPLATGTAPGSAPAANTAATPAATPAAAPKAGSQARAQ 275 Query: 231 TPDGAAPLPTDQAGVTTPVADPN----ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 +A P A + P P + + T D W V D GK++FSG+ Sbjct: 276 ADTASASAPVVVANASAPAVTPEPREAVVALRVTQDSWFSVRDKNGKEVFSGLVHAGDPK 335 Query: 287 NLTGQAPYKLKIGAPAAVQ-IQYQGKPVDLSRF-IRTNQVARLTLN 330 +TG AP+K+ +G A ++ + G+PVD S++ VAR L Sbjct: 336 EVTGVAPFKVTVGNKAGLEAVTLDGQPVDPSKYSAAKGNVARFALP 381 >UniRef50_B8DFT2 Conserved DNA-binding domain protein n=16 Tax=Listeria RepID=B8DFT2_LISMH Length = 309 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 105/343 (30%), Gaps = 55/343 (16%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G +L+ AR + GLS + + ++ + IEE + R +I+ YA Sbjct: 1 MTELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEA 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW---------------LMTF 116 V + L E + P + + + ++ ++ Sbjct: 61 VGLDSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQSVGNQGNARNRFFDILPK 120 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 + LF+V L W++ K + ST Sbjct: 121 ILIALFIVFILFIVWFFLLNKQ----------------------------DNSTEKVKTD 152 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 T+ P V+ + + T T + + +T TA Sbjct: 153 TNNPTVKVEDSTKSKDTSKDTEKK--------DTTTEEDKSTETKDKTEDTAKEVEVTKG 204 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQ---RKDGNLNLTGQAP 293 + T D L ++ T D W+ V+DA G + + ++L Sbjct: 205 ETSGNATTYTVKNTDKMTLSLSATGDSWIGVSDANGSTIQNVTLSTQNPSTEIDLGDNKT 264 Query: 294 YKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 + IG ++ GK ++L+ + QV + L A + + Sbjct: 265 VSIVIGNSPVTTVKINGKQLELAPDLVK-QVLTINLEASDTSS 306 >UniRef50_B5JY14 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JY14_9GAMM Length = 327 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 127/339 (37%), Gaps = 23/339 (6%) Query: 1 MNTEATHDQNEAL--------TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA 52 MN E+ + E + G LRNAREQ +S ++++L L ++ +E + Sbjct: 3 MNQESETESVEMEPEQQVRYDSVGDTLRNAREQQQISAVDLSDKLKLSTQLIQALESEDF 62 Query: 53 PADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW 112 A A TF+RGY+R+ + + + L+ + P + S S R++ Sbjct: 63 DALPAPTFVRGYLRAIGSELGLDTDALVEAYSNRVP---EDELALSSTSTAARQRSSKDP 119 Query: 113 LMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT 172 LM ++ + + VV+ + W Q++ A+Q + SE + Sbjct: 120 LMVWSTVAIVVVLTVLVVVWSLGFFPGQDKPEPQANQEVEQQQPESE-----------SD 168 Query: 173 DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 ++ + T + ++ A+ D + T + Sbjct: 169 ADQGLPDIQIQLEESDTAATGNSAAVAPSEPVDSESESEPSVTADADDTESEEATQEASS 228 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATG-KKLFSGMQRKDGNLNLTGQ 291 + LV+ T W EV DA +F + ++ L LTG+ Sbjct: 229 APTLSTNQVATIHPEAPVGDDTLVLTMTGSSWAEVKDANEYAHVFGTIGPRNSPLRLTGK 288 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 AP+ L +G V I Y + D S +IR+N VA+ + Sbjct: 289 APFDLFLGDARQVAITYNDRSFDHSSYIRSNNVAQFRVK 327 >UniRef50_C3AP52 Transcriptional regulator n=5 Tax=Bacillus RepID=C3AP52_BACMY Length = 308 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 99/335 (29%), Gaps = 39/335 (11%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G +L+ ARE GLS + E ++ + IEE + + R +I+ YA Sbjct: 4 VTELGQKLKEAREAKGLSIDQLHEVTKIQKRYLVTIEEGDYSILPGAFYARAFIKQYADA 63 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT-----WLVLFVVIG 126 V + EEL+ + P + P S + + + L+ +VI Sbjct: 64 VGLNGEELIVEYQSVVPQSESHDVPQISKGQKTQETMQKAASLPIADHMSKILIALLVIA 123 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + A W+ + ++ + T ++ Sbjct: 124 VGVAVWFVFQWLIGKD------------------------------EGQVKQTKSEQIEV 153 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 + + + + P A + + Sbjct: 154 QKAKNSPLDEKKEEVKAEEPKKEEPKKEEPKKEEPPAQQPPAGQEEVKLVGTSGKVSTLE 213 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN--LNLTGQAPYKLKIGAPAAV 304 L + ++++ + G +F+G ++ +LT L IG+ V Sbjct: 214 IHNNKALELEITAKGASYVDIKNEGGNVVFNGTLQEGQTEKHDLTTAKEVLLNIGSAPNV 273 Query: 305 QIQYQGKPV--DLSRFIRTNQVARLTLNAEQSPAQ 337 +I+ G+ V L +Q + PAQ Sbjct: 274 EIKLNGQVVAFPLDPEKEYHQRLVIKNLGVGQPAQ 308 >UniRef50_C4XS50 Xre family DNA-binding protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS50_DESMR Length = 493 Score = 165 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 103/351 (29%), Gaps = 26/351 (7%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + G LR RE+ GLS V+++ + S + IEE + +G+I++YAR Sbjct: 21 DLREIGTMLREERERQGLSLDTVSDKTKISRSCLAAIEEGNDSLLPHPVYAKGFIKNYAR 80 Query: 71 LVHIPEEELLPGLEKQAPLRAA---------KVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 L+ + E L + P + + Sbjct: 81 LLGVDHAEFASRLSTVYQVEEPTAFRDISLVTDLPDDDCGCSVSSSAPRPPVTLWLAGAG 140 Query: 122 FVVIGLSGAWWWQDRKAQQEEIT-TMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 V++ L+ W+ + S + S+ + + T P Sbjct: 141 AVLVVLALGWYLFSHVFSGSGASGDEVKPSETATVAPSKPLAAPAPEPTPPVAAPTPVQP 200 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAA----------- 229 +V T T PAVT Q+ D AT + Sbjct: 201 APTVPPVVTPTVPPAVTPAPAETLKPQSETAKTGAPTADDKATQDIAVSGPAGSAPAVPA 260 Query: 230 ----TTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 T AAP+ T P+ + + CWL+ A G + M K Sbjct: 261 APEATPAAPAAPVAPTAKNFTVGETGPHVVTIAANERCWLQA-GADGGAMHETMLEKGDT 319 Query: 286 LNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 +++G AV+I + K L + + + P Sbjct: 320 FTGRFADNMLVRLGNAGAVEIHFDNKLYPLQAGKGSVKTLKFVAKKTDQPT 370 Score = 65.0 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 5/147 (3%) Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + + +T A N PS AA A AA+ P + + Sbjct: 348 PLQAGKGSVKTLKFVAKKTDQPTSANGQGQPSAVPQTAAAPTAQPAASLPVASPAVAPTP 407 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATG--KKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + + + W+ V+ G K+++ +K + + ++K+G Sbjct: 408 GPAAENASGAKEVEIYGQDGSWVIVSPDKGPSKEIY---VKKGQRITVPFGEKIEIKLGN 464 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARL 327 P++V +Y G+ ++ + R Sbjct: 465 PSSVVFRYNGQETPVTTEKGAIKTIRF 491 >UniRef50_C0ZF19 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF19_BREBN Length = 299 Score = 165 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 103/329 (31%), Gaps = 37/329 (11%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G L+ ARE+ G++ + ++ + IE + R +I+SYA V Sbjct: 3 ELGQVLQRAREEKGITLDDIQRITKIQRRYLEAIERGHFHVLPGHFYARAFIKSYAEAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRD---GWLMTFTWLVLFVVIGLSGA 130 + +L + P + + G +T T LVLF+ + + Sbjct: 63 LDPNHILNHFQSDLPAQPPTEQVERLRRRRVASANNPLQAGRWVTKTLLVLFIALIIGVI 122 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 ++ + +N+ + P+ T A TP + Sbjct: 123 YF--------------------AVVNNNGGQFTQPVPGGTVNPGAEIVTPGNGGGAATSP 162 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 P+ ++ +P+ + Sbjct: 163 IAQ----------QPKPPSITTPNPQTGTNPPETVTETPQATITFESQQGSMYNYSLQGG 212 Query: 251 DPNALVMNFTAD-CWLEVTDATGKKLFS-GMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 + + + + W +++ GKK G +KD + +++G P ++++ Sbjct: 213 EKITVYLKVKEETSWFGISEGKGKKYVEQGTLKKDQEKTIELGKSAYIRLGKPTVLELKV 272 Query: 309 QGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 G VD S+ + +T+ +++ Q Sbjct: 273 NGVLVDTSKMKSM--PSNITMKVKEAVTQ 299 >UniRef50_A7JX56 Putative uncharacterized protein n=2 Tax=Mannheimia haemolytica RepID=A7JX56_PASHA Length = 332 Score = 165 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 122/338 (36%), Gaps = 12/338 (3%) Query: 1 MNTE-ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKA-PADLAS 58 M + AL+ G +L+ ARE L LS VA++ LK S + +E D ++A Sbjct: 1 MTESVNSTQAGTALSLGQQLKAAREALNLSITDVAQKTNLKKSHIESLENDIFILQNVAP 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 TF+RGY+R+Y + + +PE + + S+ + L T Sbjct: 61 TFVRGYVRNYVKFLRLPESLISSV---NYGEVTIPKEVTKVSSVKPSSNSQGKTLKYLTV 117 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 LVL +G++ WWWQ + +QE + +N+ TS Sbjct: 118 LVLLAALGMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATNNDASAQTSVPVQQPIQV 177 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG---A 235 + + PA+T + V V+ T A Sbjct: 178 SEQPAQVAETVVAAEPALTEKVEPTQAASSPVTQEDVKVVEEVKQADATTAQVEAVNVLQ 237 Query: 236 APLPTDQAGVTTPVADPNALVMNFTAD-CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPY 294 + L + T W+ V A K+L + L+ Y Sbjct: 238 QSQSEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNKRLAEKLYNNGETLSFNENEQY 297 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 +L IGAPA V++ Y+G+ V L +VAR+ L + Sbjct: 298 RLTIGAPANVKVYYKGQEVPLK---IDGRVARIHLPLQ 332 >UniRef50_C8NBB0 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBB0_9GAMM Length = 311 Score = 165 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 116/333 (34%), Gaps = 25/333 (7%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + AL GA L AR + LS A + L + +E+++ A F Sbjct: 1 MSEKTNT--TGALDIGAVLSAARMKRDLSIATAAMQSNLSQEIIERLEQNRFAEIGAPVF 58 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+ YAR + + E + K A + + ++ + + +WL+ Sbjct: 59 TRGYLGLYARFLGLNEAAVSQAFNK-IKSEPAPELRLTAANIESQARPYRRRSYLGSWLL 117 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L V+ + G +Q +T + P + Sbjct: 118 LIPVVAIGGILLYQLFDNNSWLMTQI---------------------NGAFNAPQASGET 156 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + +A + + + P+ + S N+ P + ++ + T Sbjct: 157 TPAEGGSANSGNEIVLEVGGTPLSPEGTPLSPESAQNIPGLTPPPASDSSATNSEQGAET 216 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ-APYKLKIG 299 + + ++F+ + W+E+ D+ KK+ S + + + L APY L +G Sbjct: 217 PASDTPPASTANRGIQLSFSVESWIEIKDSGNKKVLSKLVKAGEKIELPADGAPYNLNLG 276 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 P V + G+ L + + N R ++ Sbjct: 277 RPDGVVMLINGQEQPLENYRQKNSGRRFNVDVP 309 >UniRef50_C7QRV5 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=C7QRV5_CYAP0 Length = 368 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 115/371 (30%), Gaps = 43/371 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + + GA LR R LS + VA +++ ++ +E + + Sbjct: 1 MTKYNSTQTQQLQEIGAYLRQKRLASSLSLEQVASSTFIRLPILKALEGGEVDQLPELIY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGL------------------------------------- 83 ++G++R Y +++ + L + Sbjct: 61 VQGFLRRYGEALNLDGQALAKKISPNTEETALEIPAELVATGGSRLEPLGEDLSSPAIRT 120 Query: 84 --EKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQE 141 E + + G+ + + F ++G + + Sbjct: 121 NTESLPENSPSTKEVIPQKPKQPSISPNLGFSKLRVYGLYFALLGGAVLGLFYVFSRPHS 180 Query: 142 EITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAP 201 +T+ + SS L S Q P + ++ P TA +P Sbjct: 181 PQSTVKNPSSEILKQASTVAQKSPPELPKAVEETQPKLDRIVSSDQPSSIIEPVPTA-SP 239 Query: 202 AVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTA 261 VD A P + + P+P + VT P A ++ Sbjct: 240 EVDATPQASPQPEPDIEQSTTQQPINNQESELVQTPVPEPSSPVTESQTGPVAAAVSLEE 299 Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 D W++V GK + G+ +K + T Q +++G AV + KP + + Sbjct: 300 DSWMQVK-IDGKTEYEGILKKGEQQSWTAQETLIIRVGNAGAVNLSVNNKPGE--KLGEL 356 Query: 322 NQVARLTLNAE 332 +V ++TL + Sbjct: 357 GEVKQVTLTPD 367 >UniRef50_C4GFD8 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GFD8_9NEIS Length = 280 Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 66/330 (20%), Positives = 107/330 (32%), Gaps = 59/330 (17%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 N+A G LR REQ LS V+ERL L + +E + F+R Sbjct: 7 QTEAPTTNKATELGILLRAKREQKQLSIGEVSERLKLPARQIEALENGDYNSLPEPVFVR 66 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G++RSY R + + E L LE P + A SL + T+ + ++ Sbjct: 67 GFLRSYGRFLDLDESTLNDALENVVPSEKVRKAIQHDGSLNFANETPKRPFPTWIFGIIG 126 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 V I G + WQ + + A Sbjct: 127 VAIIGFGVYKWQTKSQTEH---------------------------------ANAKQEAE 153 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 S A+ T PA+ P V P + A Sbjct: 154 SKPLIASETAKPALDNPNVVVKPMTASDTQTQTA-------------------------- 187 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 + P LV+N L VT+A G+ L + + AP+++++G + Sbjct: 188 TPASAPAGVAGELVINARYRTMLTVTNAKGEVLINEIVPARSEHRFQNGAPFEVRLGYAS 247 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 + G+P+D++ + + A T A Sbjct: 248 GSTATFGGEPIDMNAARKNGKTATFTAGAS 277 >UniRef50_C8X3H6 XRE family transcriptional regulator n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3H6_DESRD Length = 342 Score = 164 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 107/344 (31%), Gaps = 29/344 (8%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 GA LR RE+ L+ V ER + S ++ IE+ + + RG+I++YA L Sbjct: 3 LQEIGALLRQERERQNLALSDVVERTKISRSCIQAIEKGDSEGLPHPVYARGFIKNYATL 62 Query: 72 VHIPEEELLPGLEKQAPLRAAKV---------APMQSFSLGKRRKKRDGWLMTFTWLVLF 122 + + +L ++Q L V + S R L++ ++ +L Sbjct: 63 LGLDGAKLAESFDRQYGLEEEGVVLESGDAAAEEVISKPEASRHSALAVGLISLSFFILL 122 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQ--------SSAELSSNSEQGQSVPLNTSTTTDP 174 L ++ E Q S S+ ++S++ Sbjct: 123 GGGWLIYDIYFSSPTVPISEPQPPLGQDESEGLEMESESASAPKPSVPGDGGDSSSSETG 182 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ--------ANVDTAATPAP 226 A + P ATN V + + Q NA + + T Sbjct: 183 AAMDSEPVRAPGNATNASLQPVNSTTSPTNGQTNATPAVATNASSASSSQAQATPTPEVE 242 Query: 227 TAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 T A + + L + + CW + G R + Sbjct: 243 EPEATSVDTAEQSGQNTAAPSAEVEDKVLQIAASEACWFRA-EVDGST-RDVYLRPGETI 300 Query: 287 NLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 L +L++G V + Y G+ V + + +V L Sbjct: 301 ALHFDESLELRLGNAGGVSLMYNGESVAVDA--SSGEVKTLRFP 342 >UniRef50_Q1MRL8 Uncharacterized protein conserved in bacteria n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRL8_LAWIP Length = 339 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 111/336 (33%), Gaps = 11/336 (3%) Query: 2 NTEATHDQ--NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 N + + G+ L R + G + ++ L + + T++ IEE + Sbjct: 3 NHIDNSQEVHSALKEIGSLLYQERVKKGYRLEDISIYLKISIHTLQAIEEGTIDSLPHLV 62 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 + +G+IRSYA+ + IPE EL + K+ W T+L Sbjct: 63 YTKGFIRSYAQFLDIPEYELTSIFYRIEHTEKTNDEGEDYPFKKKKFFSPYVWGSILTFL 122 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 + L + T + + + E+ QS + Sbjct: 123 CILAGSWLFYSSDITFSSFDVIAQMTDSGKKEVLPNQKKEENQSEGSLSLPQQQSQENIK 182 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 +SV T ++ S + + + + T Sbjct: 183 SNSSVVVTKIPENFQDHIVIKKELELSSKEDSSSQLSAQLDEKSFSQSTDMTNKSDKSDV 242 Query: 240 TDQAGVTT----PVADPNALVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLTGQAPY 294 +D++ V N +V+ DCW+ T D T + F ++ + L+ Sbjct: 243 SDKSVVEPVHMNKPGKKNIVVLKGLEDCWVHSTADKTETRQFY--VQQGQLVALSFSKSL 300 Query: 295 KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 LK+G ++++Y G+ L R+ QV +TL Sbjct: 301 VLKLGNAGGIELKYNGEK--LPPVGRSGQVKTITLP 334 >UniRef50_C8PVJ8 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVJ8_9GAMM Length = 302 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 122/335 (36%), Gaps = 51/335 (15%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N+ HD + G R + ARE+ GLS VA + + S +R +E + A TF Sbjct: 12 NSTPVHDTTQL--LGQRFKQAREKKGLSIDDVAAKTFILKSHLRALEANDFDALPQPTFA 69 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKV------APMQSFSLGKRRKKRDGWLMT 115 RG+ +Y R + + + + + Q P + APMQ R + + Sbjct: 70 RGFATTYGRFLGLDKNLVAQSFDAQYPATLKQKYATVINAPMQPMGTLNREARPSVRINP 129 Query: 116 FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA 175 F + +V+GL+ + + KA + + + A + P Sbjct: 130 FVIGGILLVLGLAIFIFNKVSKAHNDSVDQAPASAVASM-------------------PT 170 Query: 176 TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGA 235 AS++ + T VT + PA +A T Sbjct: 171 QDQVSGASLNNAGSAIVTNTVT----------------------ASGLPATGSAITGVAV 208 Query: 236 APLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 + T ++ + + + DATG + G Q + + LTGQAP++ Sbjct: 209 SADNASGTAATGQAGAKASIDIFVKDTTKITIVDATGNTILDGDQARG-SYQLTGQAPFQ 267 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + I + V + +P+ LS + + ++ A TL Sbjct: 268 VNIDKASNVSLDLNKQPIKLSNYAQNDK-ANFTLK 301 >UniRef50_A6SZX1 Uncharacterized conserved protein n=2 Tax=Oxalobacteraceae RepID=A6SZX1_JANMA Length = 343 Score = 163 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 122/330 (36%), Gaps = 11/330 (3%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 AT ++ GA+L R++ G + + VA +L L ++ +EED A +RG+ Sbjct: 21 ATEKPEPVISAGAQLATLRQERGWTVEQVANQLNLASRQIQALEEDNYAALPGMVIVRGF 80 Query: 65 IRSYARLVHIPEEELLPGLEKQAPL----RAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 IRSY++++ + +L G++ + SFS K L + L Sbjct: 81 IRSYSKVLRVDPAPILAGIKDDTVAPAILPPERSPLSASFSETKLLSSNQRGLRSKAVLG 140 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +++ L + + E + E + P T P Sbjct: 141 GGILVVLGLLAYAGQHMGWLSHGPAGSPAKVEEKLAPIELSDAAPQAVVETAPPLEV--- 197 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 ++ T T T A V A P+ + AT AP A A P Sbjct: 198 ---LEVTETKTPEVKPAETAKPVAETVAAAAKPTVPAPASVATAAPAVAPLTPVAKPAAV 254 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 PV NAL +N D W+E+ A + S + + + + P + IG Sbjct: 255 AAPKPVVPVDSKNALAINVREDSWVEIKGADNSVILSRLLKAGSSEAVAVTGPVSVVIGN 314 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A V + +G PVD+ ++ VARL L Sbjct: 315 AAGVDVTLRGAPVDVVT-GNSSNVARLNLK 343 >UniRef50_Q81A13 Transcriptional regulator n=70 Tax=Bacillus cereus group RepID=Q81A13_BACCR Length = 303 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 103/335 (30%), Gaps = 41/335 (12%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G +L+ ARE GLS + E ++ + IEE + + R +I+ YA Sbjct: 1 MTELGQKLKEAREAKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADA 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRR--KKRDGWLM---TFTWLVLFVVIG 126 V + EELL + P + P S + +K W + LV +VI Sbjct: 61 VGLNGEELLVEHQSTIPQSEKREVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIA 120 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + W+ + ++ + S ++ + Sbjct: 121 VGVVIWFVFQALTGKDDEKVPSAQSEKIEVQKAKDSP----------------------- 157 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 + V ++ P + PA + + Sbjct: 158 ---------LDTKKDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLE 208 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD--GNLNLTGQAPYKLKIGAPAAV 304 L ++ +++V D G + + ++ +++ +L IG V Sbjct: 209 IHNNKTLELELSGKGASYVDVKDDAGNVILNATVQEGQIEKRDVSTLKEVRLNIGNATNV 268 Query: 305 QIQYQGKPV--DLSRFIRTNQVARLTLNAEQSPAQ 337 +++ G+ V L +Q + + PAQ Sbjct: 269 EVKLNGQVVAYPLDPEKELHQRLVIKNQGIEQPAQ 303 >UniRef50_A0AIJ7 Complete genome n=3 Tax=Listeria RepID=A0AIJ7_LISW6 Length = 321 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 103/335 (30%), Gaps = 44/335 (13%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G +L+ AR + GLS + + ++ + IEE + R +I+ YA Sbjct: 1 MTELGDKLKQARREKGLSLDDLQQITKIQKRYLVAIEEGNYAVMPGKFYARAFIKQYAEA 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVA-------------PMQSFSLGKRRKKRDGWLMTFTW 118 V + L E + P + PM + S+G + R+ + Sbjct: 61 VGLDSATLFDEFESEVPDTPQQEVVNNEPTRVQSKRNPMPAQSVGNQTNSRNRFFDILPK 120 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 +++ + I W +Q+ ++T T + Sbjct: 121 ILIALFIVFILFIIWFFLLNKQD---------------------------NSTEKVKTDT 153 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 + P +T + + + + T+ Sbjct: 154 SNPTVKVEDSTKDKDTSKDTTSKDTTKKDTTSDDKKSTEEANKDKKEDTSKELEITKGET 213 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQ---RKDGNLNLTGQAPYK 295 + T D AL ++ T D W+ V+DA+G + + ++L Sbjct: 214 SGNATTYTVKNTDKMALSLSATGDSWIGVSDASGATIQNVTLSAQNPSAEIDLGTNKTVS 273 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + IG ++ K ++L+ + QV + L Sbjct: 274 VVIGNSPVTTVKINDKQLELAPTLVK-QVLTIKLE 307 >UniRef50_B3R1K3 Putative transcriptional regulator yfgA; cro/C1-type DNA-binding domain n=2 Tax=Cupriavidus RepID=B3R1K3_CUPTR Length = 328 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 119/330 (36%), Gaps = 32/330 (9%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + A GA L RE +S + V+ RL + S +R IE A TF +G +R Sbjct: 25 EREAAAREIGAALAREREAQRMSVEDVSARLKVAASKLRAIEAANLQALPDVTFAKGVMR 84 Query: 67 SYARLVHIPEEELLPGLE-----KQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 +YAR++H+ + LL + + A + + + + + R + G + WL L Sbjct: 85 AYARMLHVDIDPLLARFQPRPVAQVAEIARQREGGINAAFDDRNRFRSGGNGGRWIWLAL 144 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 V +G W+ D + + A ++ A + ++ + + P ++ Sbjct: 145 VAVGVAAGIWFGLDHIRAWLDARSSAAETVAAEAPAADNAGTEAGIVTAALPPVMAASDS 204 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 + A+ A A PT Sbjct: 205 PA-------------------------PSAETIPASAAAAPATPAATTAAAASAPAAPTA 239 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A L + F AD W E+ D +GK + G + + G PY++ IG Sbjct: 240 SAAAAPTAPAEGELQIRFAADTWFEIRDNSGKVVMGGTAKAGQTMAGGGTGPYRVVIGNV 299 Query: 302 AAVQ-IQYQGKPVDLSRFIRTNQVARLTLN 330 V+ G PVDL R N VARLTL Sbjct: 300 KGVESFTRGGTPVDLKAANR-NNVARLTLP 328 >UniRef50_B9YKG8 Putative uncharacterized protein n=1 Tax='Nostoc azollae' 0708 RepID=B9YKG8_ANAAZ Length = 256 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 104/332 (31%), Gaps = 76/332 (22%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M Q + A L+ RE+ +S + ++ + +++S ++ +EE + F Sbjct: 1 MTVLNDAQQEQLKEITANLQQVREEKNISLEEISVQTHIRLSFLQALEEWRFEDLPEPVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++G+IR YA + + + E +K ++ F + Sbjct: 61 IQGFIRRYADRLELDGTAIANNFE----------INFAPLESNHSIRKPSIYIPLFVPYI 110 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 ++ G ++ Sbjct: 111 FLLIAAAVGLFYLLKIDF------------------------------------------ 128 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 D ++ Q P ++ P Q + SP ++ + + AP + TP + + Sbjct: 129 ---RDKSSAQKQNPMLSVP-------QKTLTSPLKSEILPSPNTAPVSTATPSQTSTSIS 178 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 D A + + D W++V A GK F G+ K N T + ++ G Sbjct: 179 DVA-----------VTLELKGDSWVQVK-ADGKTEFEGILTKGERKNWTAKKSLTVRSGN 226 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 V I + L + QV T N + Sbjct: 227 AGVVLISVNEEEPKL--LGKNGQVKDFTYNKQ 256 >UniRef50_A8VT56 Uncharacterized protein-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VT56_9BACI Length = 302 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 105/329 (31%), Gaps = 35/329 (10%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G RL+NAR + G+S + ++ ++ + IE + R +++SY V Sbjct: 3 ELGVRLQNARIEKGISLDELQQKTKIQKRYLEAIENGDFSKMPGDFYARAFVKSYCEAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAK----VAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 + +++ + P + + +++ + + +VL +IG+ Sbjct: 63 LSVDQVFEEHAGELPKAKKESGDLPPRIDRPKSRPVKQRSAFSRLLPSLIVLLFLIGIVS 122 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 W+ + N S+T + + D Sbjct: 123 TLWFTNLG-------------------------DSSDNDSSTREEQQSQPSVDITDDLNE 157 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 + + N + + + + + Q + Sbjct: 158 DNDEEDTGETEEPDNSISNGNNTEETDASEEESQEEEIIDPSLEFVELNDAGQYVYSLSD 217 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDG--NLNLTGQAPYKLKIGAPAAVQIQ 307 AD L M F+ W+++ D +G + + + + TG++ +++G +I Sbjct: 218 ADSFDLEMIFSGGSWIQINDDSG-TVHTDTHGDGDEISFDFTGESEILIRLGFIHTAEIL 276 Query: 308 YQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 P++ + N V + + E S + Sbjct: 277 VNDIPLE---YQSDNDVQNILILHEDSVS 302 >UniRef50_D1U5G8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5G8_9DELT Length = 364 Score = 160 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 106/360 (29%), Gaps = 43/360 (11%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 G LR RE+ GL+ AV E + +++ +E + +G+++SYAR Sbjct: 2 NFEELGQALREERERKGLTVTAVMEATKISRTSIEALEAGNRSNLPHPVYAKGFVKSYAR 61 Query: 71 LVHIPEEELL----PGLEKQAPLRAAK--------VAPMQSFSLGKRRKKRDGWLMTFTW 118 + + +EL + ++ +R ++ Sbjct: 62 FLGLDADELSMVADREYKDESCGPREHGYDVAPHAEKAFHVNDCANAENRRSRLVLVVAL 121 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEI-----------TTMADQSSAELSSNSEQGQSVPLN 167 + L V+GL + D K+ + ++ ++ Q+ P Sbjct: 122 IFLVAVVGLLVFSFSSDDKSASLDQGETVRSGMGGTQAGPPAVDPDMVTDKAGSQAAPGE 181 Query: 168 TSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPT 227 T+ + + D T + P Q +V A P Sbjct: 182 TTADSPGVQEQSSGTDQDGTGQSGAGQGEAGALPTAGEPPQPGKPVDQGSVGQGAADPPA 241 Query: 228 AATTPDGAAPLPTDQAGVTTPVADPNA-----------------LVMNFT--ADCWLEVT 268 A T G P A + L++ T CW+ + Sbjct: 242 AKTGAVGTKPATDGSARTVAKANGQDETFAVTDSEAGKQKFDHVLIIRATTAKGCWIGLW 301 Query: 269 DATGKKLFSG-MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARL 327 + + R+ L L P +++IG A V + Y KP L Q R Sbjct: 302 QGDETAMARDFVLRQGEPLRLMFNNPRRIRIGNVAGVSVTYNDKPYPLDNARGNIQTLRF 361 >UniRef50_B8DPF8 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DPF8_DESVM Length = 345 Score = 160 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 118/345 (34%), Gaps = 26/345 (7%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 G LR ARE GL VA R+ + +R IE+ + S + RG+I+SYA Sbjct: 2 ALKELGIALREAREAKGLDIDDVAIRIKVSARVLRAIEDGEQDQLPHSVYARGFIKSYAT 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 ++ + + ++ +++ P + ++ + R G + LVL ++ G Sbjct: 62 VLGVDNDLVMRVVDETYPFEVPEDLLPETVVAQPHARGRTGLSLVALALVLLTLLAALGG 121 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W+ ++A +E Q + ++ + + + PA+ +T + Sbjct: 122 VWYYRQQASREADLPKVAQPAQPPQADPQPAPAQDAVPAPDAAPASNATNATVSAVAPSV 181 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP------------------ 232 +T A A + S A V A AP TP Sbjct: 182 NETSPAAGSATQPARTSPAAAASSAAQVPAPAAQAPAQGATPAAAPATPAAPAAAVTGPQ 241 Query: 233 -----DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN 287 AA + + +V+ ADCW+ + A + K Sbjct: 242 GGVYDSEAAATSGADTDGSMLAGGTHRIVVIALADCWVH-SSADDSDVRQFSLHKGQTFA 300 Query: 288 LTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 LT LK+G V+I+Y G+ QV L + Sbjct: 301 LTFSKRLTLKLGNAGGVRIRYNGQEQP--APGDMGQVRTLVFPPQ 343 >UniRef50_Q8YY03 Alr1052 protein n=2 Tax=Nostocaceae RepID=Q8YY03_ANASP Length = 292 Score = 160 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 103/332 (31%), Gaps = 44/332 (13%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN + + L R++ G+ + VA + +++ ++ ++ K + Sbjct: 1 MNLLNEAQEQQLKEISKYLLQVRQEKGIRIEEVAAKTNIRLYFLQCLDAGKFAELPEPVY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++G+IR YA ++ + + L + + +++ + F V Sbjct: 61 IQGFIRRYADILGLDGQALAKTFSVSGESAIQES---HRHEEEQIKQRPKLRIPLFVPYV 117 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L + + G + + K + + +SE N S T TP Sbjct: 118 LLLAVAAVGLIYVLNPKLITQSLANK---------QDSETTTPKQANPSPLTVAPQAQTP 168 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 S + ++ + T A D + P+ Sbjct: 169 DLP-----------------------------ESIVSDSENSSTSSTTADVGDSSTTTPS 199 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 G A+ + + WL+VT A GK F G K T + ++ G Sbjct: 200 ATLGNENNANSAVAVTLELQGNSWLQVT-ADGKTEFVGELTKGDRRTWTAKKQLTVRSGN 258 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 AV + KP + V +T E Sbjct: 259 AGAVLVSVNEKPAE--PLGSNGIVKEVTYTPE 288 >UniRef50_A7HTY1 Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HTY1_PARL1 Length = 374 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 99/314 (31%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 EA + GA LR AR + G +++A+ L ++ + +EE + A + G+ Sbjct: 26 TNEVSVEAESVGADLRAARLRRGDDIRSIAQALRIRRDQIEALEEGRHDELPARAYAVGF 85 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 +RSYA + + ++ + + RAA A + + R+ G + +V + Sbjct: 86 VRSYAEYLGLDSRHIVQRYKDELDGRAAAAAELHFPDAAEARRLPKGTALIVALVVASGI 145 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 G D T + S + + +T A + Sbjct: 146 YGGWLLTKSTDEMMTTRTAATAPAVAPIVEEVKSPGTRGDSASAATPRADAVPVVRVPGL 205 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 AT Q + P V + D+ + P + Sbjct: 206 APVATAEQNMSTPQSLYDPAPAPATVDAEGLPLEDSGEVEMAALEESAAVELPPLPEGTP 265 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 D +V WL + D TG+ L + + + L +A Sbjct: 266 YGAENVDGRVVVRARRDGAWLRIEDGTGQVLIEQTFKAGDSYRAPSRPGVILVARDASAF 325 Query: 305 QIQYQGKPVDLSRF 318 +I G+ + L+ Sbjct: 326 EIMVDGQSLGLAGP 339 >UniRef50_C7JGR8 Putative uncharacterized protein n=8 Tax=Acetobacter pasteurianus RepID=C7JGR8_ACEP3 Length = 424 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 107/322 (33%), Gaps = 10/322 (3%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR REQLG S + VA L ++ + + +E KA A + G++R+YA+ + Sbjct: 27 VGGALRKRREQLGWSLEDVAAYLRIRDAYLDALETGKADVLPAEVYTLGFLRAYAQALGF 86 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 ++ + + + RR + ++L +G Sbjct: 87 DPTPMVERYRLETRNAIRQPELVFPDPPPDRRIPPAVSISLGLAVILASYVGWYYFTGHT 146 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 ++ ++ S Q S+ + S P S P Sbjct: 147 PPAPERVPPVASLLPGEQTHNAPSPQVASILPDKSAVPAPLPPSAQPKPPSAEQALNAQG 206 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 A +A + ++P A A A N Sbjct: 207 AASAL-------PESSIAPDTPQPGGDAGTAVAQTPQQPNAQMPSEAAPAAPAAAVADNQ 259 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ-APYKLKIGAPAAVQIQYQGKPV 313 +V+ A W++V DA GK ++ + + D N+ + PY L +G + ++ G+ V Sbjct: 260 IVLKALAASWVQVKDANGKVVYDHILQPDEEWNVPVEGGPYSLTVGNAGGMVLRM-GELV 318 Query: 314 DLSRFIRTNQVARLTLNAEQSP 335 + R V R + QS Sbjct: 319 T-APLGRNGAVRRKMVLTPQSV 339 >UniRef50_Q2JPT1 Putative uncharacterized protein n=2 Tax=Synechococcus RepID=Q2JPT1_SYNJB Length = 289 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 93/325 (28%), Gaps = 46/325 (14%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 + G+ LR RE GL+ VA ++ ++ +EE +++G++ Sbjct: 2 QEPAHSLEALGSLLRQTREARGLTLTEVANDTFIRCQYLQALEEADLSRLPEPVYVQGFL 61 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 + YA + + E L + + + + ++VL V+ Sbjct: 62 KRYADYLGLDGETLSRRASPLLSAKTPHAPAPLAVVGQQPTFALRPLHLWAAYVVLIVLT 121 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + E + LS+ S +G + + DP ++ P + Sbjct: 122 VGGLSALL-------EGTGNPFGRWLVSLSTVSREGSGQQPPAANSPDPTLSAVQPTARQ 174 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 T Q + P V + +D P Sbjct: 175 LFPTLDQWTRIQGVFPEVLDAHSGGAGRKPVRLDIRVVERP------------------- 215 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 WL V A G+ +F + LN + L+ G V Sbjct: 216 -----------------SWLRVI-ADGQTVFEATLQPGAELNWEAEQSIVLRTGNAGGVL 257 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLN 330 + + + +L R +V L Sbjct: 258 VTFNDR--ELGVMGRFGEVKELMFE 280 >UniRef50_C6BV70 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BV70_DESAD Length = 292 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 113/324 (34%), Gaps = 34/324 (10%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + G+RL++ R++ GL+ + + E + + IE + +G+I++YA+ Sbjct: 2 DLKELGSRLKDERKRQGLTMEQIMEITKVSRVNITAIESGNQKEFPHEVYAKGFIKTYAK 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + EE+ + + A ++ T +++ ++ G+ G Sbjct: 62 ALGLDAEEIGDEFSRIMGSGTTESADDVVETVQPDYSADTKKSPVGTIILILLLAGVVGG 121 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + A + E+ V+ A + Sbjct: 122 LVYYLHDNSFFSAKNEAQTEIVAEEAVQEK-----------------PATEPQVEAPAVD 164 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + V PAPA Q A +P + ++ A P AA A P+ A P Sbjct: 165 EKKAEVVEPAPAEVEQSAATEAPVETKIEEQAVEQPVAAEENIVAEPVGNTVAITAKPG- 223 Query: 251 DPNALVMNFTADCWLE-VTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQ 309 CWLE V D + K + ++ L+L + KLK+G V+I Sbjct: 224 ----------EACWLEAVVDGSAK---EYVLQEGETLSLPFEDSLKLKLGNGGGVEIASN 270 Query: 310 GKPVDLSRFIRTNQVARLTLNAEQ 333 GKP QV +L +A Q Sbjct: 271 GKPYSFDA--PKGQVKKLEFSAVQ 292 >UniRef50_Q2B1K4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B1K4_9BACI Length = 304 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 94/330 (28%), Gaps = 44/330 (13%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G L+ AR + G+S + ++ + IEE ++R +I+ YA Sbjct: 4 LTELGNHLKEARIERGMSLDDLQTATKIQKRYLVGIEEGNYSMMPGKFYVRAFIKQYAEA 63 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 V I EEL + P+ AA + S + RK G L+ ++IG+ Sbjct: 64 VGIDPEELFEQYKNDIPVTAASDDIPEKLSRVQTRKNISGSSSRLADLLPKILIGVFVVG 123 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + P + +T Sbjct: 124 VIALLYYFIVM----------------------------ANNGKDEGEPADNGNTQGVEY 155 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 A + + + A P + AD Sbjct: 156 GQSDDLAKEEPKEEDGQEEGGGAAEEEEPAEEEKPEPPAQEVAVVESAGNDTVYEVKNAD 215 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKD----GNLNLTGQAPYKLKIGAPAAVQIQ 307 L + T + W+ + + G F GM K ++L+ + L +G + ++ Sbjct: 216 QFVLKVVSTGETWVSIKNGKGYSFFEGMLLKGSAESQTIDLSKEPEAVLVVGNTSQTELY 275 Query: 308 YQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 + ++ + + + QS Q Sbjct: 276 INDQKLEYA------------IPSSQSVKQ 293 >UniRef50_A5VIW4 Uncharacterized protein n=11 Tax=Lactobacillus RepID=A5VIW4_LACRD Length = 345 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 99/342 (28%), Gaps = 65/342 (19%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + L G LR ARE+ G + + + ++ + IE++ + Sbjct: 1 MSENENDQKR--LEIGKILRKAREEKGYTLDDLQQMTKIQKRYLIAIEDENFDELPGDFY 58 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG--------- 111 +R +I+ YA V + ELL + Q P + + R + Sbjct: 59 VRAFIKQYANTVGLDGNELLQKYDDQLPQTKTEEYSDHLAQAVETRANQRKTVSGSVDKV 118 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 T ++ V++ + A W + +T D SS +S S + + ++T Sbjct: 119 RNYMPTIIIACVIVLVLAAIWITAIARNHRDSSTRIDNSSVSVSGESRKKAATSAKKAST 178 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 +T+ Sbjct: 179 KQSKSTAIKLQEAPN--------------------------------------------- 193 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT-- 289 T + + L + + W++V A L + + ++ Sbjct: 194 -----RNDTSVTYTASQLTKDTTLQIEPSDRSWMQVR-ANNNDLLNKTLNNNEKTSVKIS 247 Query: 290 -GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +G A +++ + + + R +T+N Sbjct: 248 RDTTSLVITVGNARATKLKLGNQEIYFTNNGRYQNTRNVTIN 289 >UniRef50_B7R9Q0 Putative uncharacterized protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R9Q0_9THEO Length = 267 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 90/302 (29%), Gaps = 52/302 (17%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G L++ R + G++ + + E ++ ++ IE+ A + +G+++SYA + Sbjct: 3 ELGEFLKSERLKKGMTLEEIQEITKIRTRYLKAIEDGDFSVMPAMVYAKGFVKSYAEALG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + E++ E + + + +WL + L Sbjct: 63 LDGNEIVKKYEYLFKEKEEENLSKAKSYKKTT--------LDLSWLFSALKKALVSILII 114 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + A L E Q+VP T + P+T ++V Sbjct: 115 GIIGYGFYYFFAQIKKGLAPLPPEQEVSQTVPEKNETPSAPSTQENVTSTV--------- 165 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + T + + +P + Sbjct: 166 ---------------------------------SPKTVIEKVSETSKKIEYKISPASQSY 192 Query: 254 ALVMNFTAD-CWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 + +N + CW + G ++ G+ + + +G P AV+I G+ Sbjct: 193 KVEINMVGEKCWFSIK-VDGNVVYEGLMTAGMMKTFEVKNDITILMGYPPAVKISVDGEE 251 Query: 313 VD 314 + Sbjct: 252 LP 253 >UniRef50_C1XSS0 Uncharacterized conserved protein n=2 Tax=Meiothermus RepID=C1XSS0_9DEIN Length = 307 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 115/319 (36%), Gaps = 15/319 (4%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 TG RL+ ARE G S +A +L L+ + + +EE + + RGY+R YA+++ Sbjct: 3 ETGRRLKEAREAQGRSLAEMARQLSLRKAILEALEECRYEELPEAALSRGYLRRYAQILG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + E LL + R+A + + L + W +L +++ +G W Sbjct: 63 LDPEPLLAEFPAKTGSRSANLTGEAAP--------PRRGLPIWFWTLLLLILIGAGVAAW 114 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + Q + T + + V Sbjct: 115 RLFTIQNKPTTVEVAPPPPPAPPQRVTLRVTTQPPGARVYLDGFLLGQSPVQAPGIEVGE 174 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + AP P Q + ++ A A P + P PT TTP + Sbjct: 175 RVLRIEAPGFKPYQTTLRLTENKDLSVAL---EVAPPPPAASNPSPTPANPQTTPPTNTP 231 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 ++V+ W+ VT A G+KL+ G+ + L + P ++ G PAAV++ G+ Sbjct: 232 SVVLRLEGRSWVRVTTANGQKLYEGIPAQGTVLTYS--QPVVVRAGNPAAVRVTVNGQ-- 287 Query: 314 DLSRFIRTNQVARLTLNAE 332 D + Q A Sbjct: 288 DQGVMGQPGQPITRRYPAS 306 >UniRef50_C7I047 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I047_THIIN Length = 308 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 116/340 (34%), Gaps = 42/340 (12%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M GA LR AR G + + +A +L + + + +E A TF Sbjct: 1 MTEPTPELIASRAKAGAALREARMGAGRNVEELAAQLKVAPAKIAALEAGDWSALPDDTF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEK----QAPLRAAKVAPMQSFSLGKRRKKRDGWLMT- 115 R +RS + + I + LL L +P+ + A + + + + G Sbjct: 61 GRALLRSCCKALKIDAKPLLDLLPGAPVLHSPVPDEEGAELAARVPERPLPRAAGGARKS 120 Query: 116 --FTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTD 173 WL + +V + ++W P T Sbjct: 121 YGLLWLAVLIVALAAVVYFW-------------------------------PALRGLTEG 149 Query: 174 PATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD 233 ++ P + PA + P + + AN ++ P + T Sbjct: 150 LMPSAAKPQESAQGTVESVLPAASHPTSHAASHPASHPASHPANAGSSPLPLQSRPATAG 209 Query: 234 GAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT---G 290 A A T A N L + +A W++VT + GK +FS + + ++ G Sbjct: 210 SAPVPVAPVASAATSAASGNVLQLAASAPSWVQVTASNGKVIFSQLMQPGAPQSIQVPAG 269 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 P + +G + Y GKPVDL+ R N VAR TL Sbjct: 270 STPLAIVVGNAPHTAVSYAGKPVDLTPDTRAN-VARFTLK 308 >UniRef50_C0DW30 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DW30_EIKCO Length = 296 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 102/337 (30%), Gaps = 42/337 (12%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M + A G LR REQ LS V+E L L V +E F Sbjct: 1 MTEISPPQLAAAEELGKLLRQNREQQQLSLGDVSEHLKLPARQVEALENADFSKLPEPVF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +RG++RSY R +++ E +L +Q + +P+ + + + Sbjct: 61 VRGFLRSYGRYLNLD-EAVLNSYLEQIVAPSQFQSPLAKEDGNVKMTYHNAPIKK----- 114 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 W + A + Q + + Q+ +S Sbjct: 115 ------PFPRWIFGVAAAAAIVGVVVLWQMKSNTEHQKQNAQTSIPENQILPPNLDSSNV 168 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 A+ P +N +P+ A + +A Sbjct: 169 QVLPLQEASAPAASLPAVSGSQPQPVENPASTPAAAGIQSA------------------- 209 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 LV+ +L VTD G+ L S + +G PY+++IG Sbjct: 210 -----------QGELVLKLRFRSFLTVTDKDGQMLVSKIVPAGSEHRFSGNGPYRVRIGF 258 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 Y G+ ++++ + + A T AQ Sbjct: 259 AKNSLASYSGRGINVAEHMVDQKTAAFTAGGSDDAAQ 295 >UniRef50_B9TIK3 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TIK3_RICCO Length = 355 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 124/356 (34%), Gaps = 27/356 (7%) Query: 1 MNTEATHDQNEALTT-------GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAP 53 MN + E GA L R++ G S + VA + L ++ IE D Sbjct: 1 MNEVPSQPSPEGAQPVQGPSLPGAMLAAQRQKKGWSVEQVASLVKLAPRQIQAIEADNYA 60 Query: 54 ADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAP-LRAAKVAPMQSFSLGKRR------ 106 A RG++RSYA++V + L + +++ + + P S S Sbjct: 61 ALPGLAVARGFVRSYAKVVGLDANALTAAMPQESDVAQRDHIVPQHSLSTPFSEGPLPAM 120 Query: 107 ----KKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQ 162 + L +V+ ++ A W D A ++ + S ++ Sbjct: 121 MMSTRGNSSPLPIIAGVVVVALLAGGAAVRWSDLGANVPQLAWLKSHKSESAAAPELPAN 180 Query: 163 SVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAA 222 + ++ T + + PAS + + A +P+ A AA Sbjct: 181 ADAGSSETPVNARVETITPASDEAAKSAAAAVEAAPAQAATPAAAETASAPAHAADAPAA 240 Query: 223 TPAPTAATTPDGAAPLP--------TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKK 274 + +AA+ + A+ T V + L + F D W+E+ A Sbjct: 241 SVPASAASAANAASASAPAPAQASGTTVPSGLNIVNSKDMLRLTFREDSWVEIRRADKST 300 Query: 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + S + + L IG A V +G+P+DL +N VAR+ LN Sbjct: 301 IISRLLKAGTTEAFDVSDATSLTIGNAAGVDATLRGQPLDLKTPGGSN-VARINLN 355 >UniRef50_C5BLW0 Transcriptional regulator, Cro/CI family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLW0_TERTT Length = 313 Score = 156 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 133/341 (39%), Gaps = 38/341 (11%) Query: 1 MN-TEATHDQNEALT---TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADL 56 M E T D +L GA LR R + GL +AE+ + ++D+E+D Sbjct: 1 MTGEERTTDYRASLAEGKPGAALRIVRLEAGLPLSKIAEQTLIPEWKLQDLEDDTYDRIG 60 Query: 57 ASTFLRGYIRSYARLVHIPEEELLPGLEKQA------PLRAAKVAPMQSFSLGKRRKKRD 110 A TFL GY+R YA L+ + E + L +Q + A + + +K Sbjct: 61 AKTFLNGYVRKYASLLKLDASEFVGALPEQMRSNVAPAQSFTETAANATAPKPRAKKSGT 120 Query: 111 GWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTST 170 + +V+F++ + A ++ + + + +S +++ + P++++ Sbjct: 121 KRRLPVIPVVVFLIAAWAIAVYFIEDVGPGDNEAGTVEAASNIGELPNDEKGAPPIDSAD 180 Query: 171 TTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAAT 230 T D + + A AP AT Sbjct: 181 TEDRGDFDGDTSVQEIPV---------------------------LLDLPEADLAPVVAT 213 Query: 231 TPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTG 290 T + L F DCWL+VTDATGK +F+ +Q K NL L G Sbjct: 214 QEPALEAESQVTPDSTDATPSQDRLNFTFNDDCWLQVTDATGKVVFAQLQTKGDNLQLFG 273 Query: 291 QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 ++P+ + +G AV I+ G PVD++ + R T+++ Sbjct: 274 ESPFSVMLGNARAVAIELNGAPVDINPVSNR-KTLRFTVSS 313 >UniRef50_Q0BUK1 DNA-binding protein n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BUK1_GRABC Length = 426 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 111/361 (30%), Gaps = 53/361 (14%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 A T G LR RE LG + + +A L ++ + + IEE + +T+ G++R+YA Sbjct: 14 NAQTIGGELRAVREHLGWALEDIAASLRIRTAYLLAIEEGRIGDLPGTTYAMGFVRTYAA 73 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + +E + + +A + + + + ++L VI ++G Sbjct: 74 SLGLDPDETVQRFKTEAGAGHHQQELHFPAPV------PERGVPAGAVVLLGAVIAVAGY 127 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPA--------------- 175 W A + + ++ P+ + Sbjct: 128 IGWYKLSANHPVPDAVQEVPEHLAPLARKEEAKTPVASPPVASATSQAQPSAPLSASSAS 187 Query: 176 ------------------TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQAN 217 S PA P+ A A Q + + + Sbjct: 188 PAPVPGAETHAAQIPSNGPASNGPAGAQAETAGASPPSRPAEHQAPGHQTSERAADAPIM 247 Query: 218 VDTAATPAPTAATTPDGAAPLPTDQAG--------VTTPVADPNALVMNFTADCWLEVTD 269 +A PA + + G Q+ + + +V+ +AD W++V Sbjct: 248 SPSAMPPASSQPSLAAGQTTPSPGQSSGPDGVKPVASGADKTLHGIVLKASADAWMQVKS 307 Query: 270 ATGKKLFSGMQRKDGNLNLT----GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVA 325 G L + + + + GQ P L G QI G DL V Sbjct: 308 QNGTILLNKVMHAGESWAVPEAQAGQGPLLLTTGNAGGTQIVMDGH--DLPPLGNNGAVR 365 Query: 326 R 326 R Sbjct: 366 R 366 >UniRef50_Q2W6V6 Uncharacterized protein n=3 Tax=Magnetospirillum RepID=Q2W6V6_MAGSA Length = 434 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 66/370 (17%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA LR ARE +G + A+ L ++ + +E+ + T+ G++RSYA + + Sbjct: 59 GATLRAAREGMGKTLPDCAKLLRIRQLYLEALEDGRHRDLPGGTYAAGFLRSYAEYLGLD 118 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 EE++ ++ + S +G + + L +++ W Sbjct: 119 SEEMVRRFREEGAGGFKNRTELTFPSPV-----SEGRIPGGAVIFLGLILAAVAYGGWYL 173 Query: 136 RKAQQEEITTMADQSSAELS-------------------------SNSEQGQSVPLNTS- 169 + + ++T M L+ + E V Sbjct: 174 LSSSETKVTEMVPPLPDRLAGVLNRQASLTGEAKTGDVAKPGDDKTKDEVVPPVEAEEDK 233 Query: 170 --------------TTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQ 215 P T + + P + P++ Sbjct: 234 PSAANPAPAATEPAKVEAPKTEPAKIDAPKVEPPKVEAPKPEPAKVEPPKVEAPKPEPAK 293 Query: 216 ANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA------------------DPNALVM 257 P P A P + P + +V+ Sbjct: 294 VEPPKVEAPKPEPAKVEAPKVEAPKAEPAKVEPPKAETPATAVADGKVYGTEYADSRVVL 353 Query: 258 NFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 T DCW++V + G L S + R+ + + ++ L +G ++++ G+ V Sbjct: 354 KATGDDCWIQVREVDGSLLMSRLLRRGDSFRVPNRSGLSLMVGNAGSLEVNVDGRKVP-- 411 Query: 317 RFIRTNQVAR 326 QV R Sbjct: 412 ALGAPGQVRR 421 >UniRef50_Q30ZR3 Transcriptional regulator, XRE family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZR3_DESDG Length = 328 Score = 155 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 103/331 (31%), Gaps = 17/331 (5%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G LR ARE G+S + +R + + IEE + + + +G++++YARL Sbjct: 3 LKELGQALRQAREARGMSLKDAEKRTKIAARIISSIEEGRNDSFPHPVYAKGFVKTYARL 62 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW----------LMTFTWLVL 121 + E + +E++ + + L + ++R L +L Sbjct: 63 LEFDAELVRSVVEQEFVDDSDDDPVLPPPKLVVKPRRRTAPLVAGLLVVVLLAAGGYLAY 122 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 ++ A Q Q +++ + +S+ S + + A Sbjct: 123 RYLVAPVVAEKQQRSDTVQSNGSSVPAAAVPAVSTPSAAEGNATSVQGNAAESAEPVNET 182 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 + A + A +Q V A AP P A Sbjct: 183 GKASSGAASRAVAPAPAEMAVAADTAGTGAQTAQQPVPQKAPVAPPVPAVPVPQAEQAPV 242 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVT--DATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 A L + DCW+E D ++LF R + +K+G Sbjct: 243 AGQKKAAAAGEQQLRVEARLDCWIEARMDDVRDQELF---LRAGQAVVFRFDKSLSVKLG 299 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V ++ G+ V + V L Sbjct: 300 NGGGVDVKLNGRAVPVEA--APGDVVTLQFP 328 >UniRef50_C8WWM2 Transcriptional regulator, XRE family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWM2_ALIAD Length = 312 Score = 155 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 90/308 (29%), Gaps = 9/308 (2%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 G LR RE LGL+ + + ER ++ + +E + + RG++RSYA ++ Sbjct: 3 EQLGQILRARRESLGLTVEDIEERTKIRKRYIEALESGQWDVLPGRVYARGFVRSYAEVL 62 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 + ELL +A+ + + + + Sbjct: 63 GLDGSELLEKYVDGGDAGSAEPGVRAESPALTSENRAADRKPAARMVEPRSLNEMERT-- 120 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 + R ++ E + S S GQ + + + T Sbjct: 121 -RSRAHERHERSRRETYDRPVRSVGSWVGQGLLIVGALVVVGGLYVLLHHHHGQATHRTN 179 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 T + Q + A P A T A Sbjct: 180 TTTSSPQKT----QATKPATHQTAPPKRTTQPIQKAQTVVVALPYANGMYTYKVLHAASL 235 Query: 253 NALVMNFTADCWLEVTDATGKKLF-SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 +V + + W T A G+ + + + + + + + Q +G V I G+ Sbjct: 236 QVVVTVNSGELWFSAT-ADGQAVAPNVILNQGQSKSFSAQNNVTFHLGHVQGVSITVDGQ 294 Query: 312 PVDLSRFI 319 PV L Sbjct: 295 PVQLPNIT 302 >UniRef50_Q39S75 Transcriptional regulator, putative n=2 Tax=Geobacter RepID=Q39S75_GEOMG Length = 280 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 100/335 (29%), Gaps = 56/335 (16%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 ++A + G LR RE G S++ A + + + +EE+ + +++ Sbjct: 2 SDALTPGKGGTSIGILLRETRESRGESREDAARVTRIGKNYLAALEEESFDKLPSPAYVK 61 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G++R Y + + + ++L+ E+Q A + + Sbjct: 62 GFLRVYGKHLGLSPDDLVARYEEQLVPAPATEQEEDEGGAPPVARVAIPPIR-------- 113 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + I + ++ Q + P+ PA P Sbjct: 114 ----------------NRWMIPLVLLALVLVTATIIPQREPAPVRPVPEPVPARVLLAPP 157 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 V + ++ ++ A A + A Sbjct: 158 PVQSPLSSVAAAPLSKLQEAPAESAEAASPEAAAPSTKP--------------------- 196 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 L + DCWL++T G + + G+ + L +G Sbjct: 197 --------GGMVLKLKVNQDCWLDIT-IDGAVSQQYDLKAGDLIEWKGERVFSLDLGNAG 247 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 V+ ++ GK L F + A +TL AE + Q Sbjct: 248 GVEAEFNGKV--LPSFGEAGKTAHVTLPAEYTAEQ 280 >UniRef50_B0SW88 Putative uncharacterized protein n=2 Tax=Caulobacter RepID=B0SW88_CAUSK Length = 357 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 104/306 (33%), Gaps = 7/306 (2%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 ++ + G+ LR ARE GL+ + VA+ ++ S + +E+ + + F GY Sbjct: 30 HQPSVDDGVDIGSALRAAREFRGLNLRDVADATRIRQSYIEALEDLRLEELPSRPFTIGY 89 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 ++SYA L+ + + + + P + + R +RD L L + +V Sbjct: 90 VKSYANLLGLDGDAAVARFKLDVPDDSEPLRA-----PVGVRHERDPRLGLILALGVLIV 144 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 + W R ++ T Q+ A + ++ V N + P Sbjct: 145 AAI-VLWNVAQRAIAKDAPPTQVAQAQATAAVSAPAAVPVDPNAVPGSVSLGAPLPAPVE 203 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 TT +TP + A + V+ AA + + A Sbjct: 204 STTPEPYKTPGLDDAAANGGSADAVTAASKARAVEAAAAAPADPSLQVGLGSAFRAKGAV 263 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 AD + L++ L V DA G F+ ++ PAA Sbjct: 264 YGAAPADASGLILQARKPASLTVHDAGGAIYFTRWMAAGEAFRAPRNGGLIAEVSDPAAF 323 Query: 305 QIQYQG 310 + Y G Sbjct: 324 DV-YNG 328 >UniRef50_C0GKG3 Putative uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKG3_9FIRM Length = 283 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 99/326 (30%), Gaps = 64/326 (19%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G L+ ARE GL+ +A++ + ++ +EE +L+G +R YA Sbjct: 1 MQEIGQELKQAREDRGLTLEALSSSTLIAKKYLKALEEGDFDQFPGEVYLKGALRKYATE 60 Query: 72 VHIPEEELLPGL----------EKQAPLRAAKVAPMQSF---SLGKRRKKRDGWLMTFTW 118 V + E LL + + P K PM + R+ G L F Sbjct: 61 VGLDPEPLLTRYTGTEAQTDNQDNEQPKPVEKKKPMPEAVMKNYNTVRRINKGRLAMFVL 120 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 ++ + +G+ + D ++ Sbjct: 121 VLALLFVGVRAILI--------------------------------------SADSPAST 142 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 PPA D QTP + + + A Sbjct: 143 EPPALEDNELPGEQTP------------DDQPAPDGEPAEEEEPEDVEEQEPEMRIEAED 190 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 T AD + ++F+A CW+ G + F ++ + + + Sbjct: 191 IQGGERFTVYNADSLVVDLSFSARCWVRAH-TDGSQEFEHTFSAGDERSVRAENELRFRF 249 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQV 324 GA +AV ++ G+ ++L + V Sbjct: 250 GAASAVTVEVNGETIELPQSGNAYNV 275 >UniRef50_D1B786 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B786_THEAS Length = 293 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 97/310 (31%), Gaps = 39/310 (12%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 + G LR RE GLS + V ++ + + IE + + RG++R+Y + Sbjct: 3 SLGGALRAMREGQGLSLEDVERDTKIRRAFLEAIESGEVQRIPGMAYARGFVRNYCEYLK 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 P +L P ++ +V + R+ + + VL + + + Sbjct: 63 AP--DLWPRFDELLRGDQDEVLGSYAPPRTAFRRSS----RWWLYAVLVGAVAFASYLLF 116 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 Q Q+ M + + + + +G + D +P + + Sbjct: 117 Q---QWQDFKARMMESVITKPAEPTLEGPQDQAQVPASEDLVVEVSPDQPGQGAVSGAVS 173 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + ++D +P + AP Sbjct: 174 GEPVSGEASMDLSWMDGGAPKEPKEAEERRGAPG-------------------------- 207 Query: 254 ALVMNFTADCWLEVTD-ATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 + + CW++VTD A +F G + ++ ++++G + ++ Sbjct: 208 -VTVRAIGVCWVKVTDLANNAVVFQGTLKDGQEMSFESPKGLRVRLGNAGSASLKT--SS 264 Query: 313 VDLSRFIRTN 322 +LS Sbjct: 265 AELSPAGPKG 274 >UniRef50_D2LSB0 Transcriptional regulator, XRE family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSB0_BACS4 Length = 297 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 86/310 (27%), Gaps = 40/310 (12%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G RL+ ARE+ G S + + ++ + IEE + R +++SYA V Sbjct: 3 ELGVRLKAAREEKGYSLEELQSITKIQKRYLSAIEEGDFSRLPGDFYARAFVKSYADAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQS-----FSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 IP E L + P + + + ++K + M VLF++ Sbjct: 63 IPSEMLFEEHRDELPQPKREKTDLPARVNRSKPKMVKKKSKVMSFMPTLIAVLFILAIAG 122 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 W LN ++ TD T V Sbjct: 123 VFWI---------------------------------LNQNSDTDEQQTGASREDVQANP 149 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 T + V + Sbjct: 150 EFDITDELEEGLEESGEDSEPEVEVEPEPEPEPEPEPEPEPEQVLELDRTEGTNSYFILS 209 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD--GNLNLTGQAPYKLKIGAPAAVQI 306 + + + F+ D W+++ D+ + S + + + ++ +G ++I Sbjct: 210 NTEEFDVRLEFSGDSWIQINDSNNSAIISQTFGDGDIESFDFSDESNINFHLGRTITLEI 269 Query: 307 QYQGKPVDLS 316 + ++ Sbjct: 270 YINDELLEYP 279 >UniRef50_A0LP00 Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LP00_SYNFM Length = 309 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 103/319 (32%), Gaps = 17/319 (5%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 L++ R + G++ +++ + +ST++ +E + ++ ++R+Y + I Sbjct: 8 LKSVRLERGITLDSISRNTGMSLSTLKALEAANWDKLDSLLLVKNFVRAYCSALGIDSAA 67 Query: 79 LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 +L + + ++ + K+ L F L+L + + + + Sbjct: 68 VLEKYAADIRACNRQNEYLARYAKWSKVKRSRKRLGPFGMLLLGIGLSGLASGGVWIAEK 127 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 + T + V N +P P A V TA Sbjct: 128 RARVSQTPPIAKTVYSQQEFPTDLPVRANPVAKPEPKVEPAPVAPVVETAAAPAVKEPAE 187 Query: 199 PAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMN 258 + + V +QA+ A P A + + Sbjct: 188 TPVQQEVVEAGEVRTAQASGLPNEVLAAGEPAGPSET--------------ARKHVFAVA 233 Query: 259 FTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318 + W++V + G+ S M + ++ +G V++ + G+PVD Sbjct: 234 ASEKTWIQV-EMDGRITQSAMLHPGETREWKAEKGMRVVVGNLGGVRMSWNGRPVD--AP 290 Query: 319 IRTNQVARLTLNAEQSPAQ 337 R+ QV R L Q + Sbjct: 291 GRSGQVLRFHLPDPQYVKE 309 >UniRef50_B1WY62 Putative uncharacterized protein n=2 Tax=Cyanothece RepID=B1WY62_CYAA5 Length = 369 Score = 152 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 119/371 (32%), Gaps = 42/371 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ ++ + L+ R + G S + +A +++ ++ +E + Sbjct: 1 MSKYSSIQAEQIRKIATYLKEQRVKQGFSIEQIASMTFIRLPMLKALESANIEQLPELIY 60 Query: 61 LRGYIRSYARLVHIP------------------------------------EEELLPGLE 84 ++G+IR Y + I L+ Sbjct: 61 VQGFIRRYGEALGIDGHSLSHQINASQVEKPTISPNLVSAPTQESSVGQEVPATLVNEDN 120 Query: 85 KQAPLRAAKVAPMQSFSLGKRRKKRDGWLM---TFTWLVLFVVIGLSGAWWWQDRKAQQE 141 K++ +K + S WL + +L + ++G ++ R E Sbjct: 121 KKSVAVKSKPRTLVHPSEETAEPSEVSWLRQLKLYWIYLLVLGGAIAGLFYLFSRPPATE 180 Query: 142 EITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAP 201 + D + S+ E + +S T P TS + +T T +T P Sbjct: 181 QTAQTQDTETVTRSTKPETTVPLTQPSSPITKPEVTSQQTQTEETAQTTENANTLTQPET 240 Query: 202 AVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTA 261 + ++ + + S A T + AT +P + T + Sbjct: 241 IISSEEPSPILESPQATLEATTSNTSEATGNSTISPETANNTISETATEKAITAALQLEG 300 Query: 262 DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 D WL+V G+ + G+ ++ N Q ++ G AV++ KP ++ Sbjct: 301 DSWLQVR-VDGEVEYEGILKEGEQQNWDAQETLTIRAGNAGAVKLSVNNKPAEV--IGEL 357 Query: 322 NQVARLTLNAE 332 +V + + + Sbjct: 358 GEVKTVEVTPD 368 >UniRef50_C9LVZ7 Transcriptional regulator, XRE family n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVZ7_9FIRM Length = 261 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 102/322 (31%), Gaps = 62/322 (19%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR RE+ LS + + + ++ + IE+ + + +G++R+YA + + Sbjct: 2 IGDLLRRERERQNLSIKDIEKATSIRALYIDAIEKGEYKTLPGEVYAKGFVRNYANYLKL 61 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 E++ ++ + S S + R+++ Sbjct: 62 NANEIVNAFNEEMHPQEELQDAAGSSSAEEARQEQS-----------------------A 98 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 +R ++ + S + +S ++ + + A + D + Sbjct: 99 ERNREEYRGPKITSLESYPMEKSSHGVRNALMVAAAVFVVAFAALIAFGGDEEPS----- 153 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 APAP Q ++A P AD Sbjct: 154 ---APAPRAKMQTQQGQKQTEA----------------------------APKPAADSVE 182 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + ++FT CW EV GK F G K L L G+ + G A+ GK D Sbjct: 183 VKLSFTDRCWTEVV-VDGKTEFEGTAEKGKVLTLKGKDKVHITAGNAGALNYSLNGK--D 239 Query: 315 LSRFIRTNQVARLTLNAEQSPA 336 + + +V T E + Sbjct: 240 MGAIGQKGEVVEKTFTKENAAK 261 >UniRef50_C5CXG5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXG5_VARPS Length = 322 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 97/318 (30%), Gaps = 20/318 (6%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 T G LR ARE GL + VA L + + +E D + F R S R + Sbjct: 24 KTAGDMLREAREAHGLHIEMVAAALKVPPQKLIALEADDIASLPDPVFARALASSVCRAL 83 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWW 132 I +L L + A +A W + Sbjct: 84 RIDPAPVLAKLP---GAQRAALALADRTLKSNIVSGTPRWN-------------GGRSSG 127 Query: 133 WQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQ 192 R + + S Q + T+ + P A A Sbjct: 128 LPSRALLTVVGLLLVGAAVLFWLPQSVFDQVGASVSRWTSRGDGDTAPVAEAPVAAPAPG 187 Query: 193 TPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADP 252 +V + V P A TP A A + V A Sbjct: 188 GSSVVVESAPVSPVAPPTS----AAPAALGTPPAAAPPAGSAPAAAAASPSAVAAAPAGS 243 Query: 253 NALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKP 312 LV +CW+ VT+A GK+L + + L+G P + +G +AV +Q GKP Sbjct: 244 QQLVFVAREECWITVTEAGGKQLLRRSLQAGETVALSGTLPLSVVVGRASAVDVQVHGKP 303 Query: 313 VDLSRFIRTNQVARLTLN 330 DL R VAR + Sbjct: 304 YDLKPVTRGGGVARFEVK 321 >UniRef50_Q01SZ1 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SZ1_SOLUE Length = 317 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 92/317 (29%), Gaps = 24/317 (7%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G LR R + L + ++ L + + IE D+ F + ++R YARL+ + Sbjct: 4 VGETLRRERVKRNLDFEQISRELKISTRFLEAIENDQYEKLPGGVFAKSFVRQYARLLGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 EEEL L+ + + + T V W Sbjct: 64 DEEELATQLQGVIAPPLEPLLSPEKRPASVAPIQVPKVEEWQT------VGDRGFRWTGS 117 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 A + + + + + T P+ + P QT Sbjct: 118 LSAAAMVVVVMLVCSAVYAWLQRPKATAATQAAAPVHTAPSPVAAQPVPPPPAPPAAQTT 177 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 T A + A AA PA T P+ A + Sbjct: 178 EPTQAAASTAVPVPAGEQKPVEAAAVAAKPAETKPLAPNPDATVH--------------- 222 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 + + W+ A GK FSG ++ G L++G V I GKPV Sbjct: 223 VQIVADEPVWISAR-ADGKYTFSGTLNPGDTKSVEGVKDVVLRLGNAGGVSISLNGKPV- 280 Query: 315 LSRFIRTNQVARLTLNA 331 Q + L + Sbjct: 281 -GSVGPKGQTRTVQLTS 296 >UniRef50_A9HJ46 Putative uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJ46_GLUDA Length = 404 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 106/351 (30%), Gaps = 28/351 (7%) Query: 1 MNTEATHDQNEALT-------TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAP 53 MN + + G LR REQLG + VA L +++S + +E+ + Sbjct: 1 MNDTSARNPAADPRGAGAPNGVGPTLRARREQLGWALPDVATWLRIRLSYLEAMEDGRVK 60 Query: 54 ADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWL 113 + + G++R+YA+ + + E L+ + +A P SF + Sbjct: 61 DLPGNVYTVGFLRTYAQALGLDAESLVARFKAEA-RDNIDYKPELSFPAPVPGSAVPAGV 119 Query: 114 MTFTWLVLFVV--IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 M V+ + +G Q QQ A + S Q SV + Sbjct: 120 MALLGGVVIIAAYVGWYRMTGVQSVPPQQVPSVYSAIPGMTRQAPTSPQVASVLPSGRPI 179 Query: 172 TDPATTSTPPASV---------------DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQA 216 P S S T A Q Sbjct: 180 GPPQPLSNAERSAITDGDVPAPAPLAAPTPAVPPQGTTPQGAVTQGTVTQGTLAQGNGTP 239 Query: 217 NVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF 276 V AA P P + P A +++ +A W++V A G ++ Sbjct: 240 GVGDAAVPPPAGPSQSAMQPVPQPAPVAAAPPTAPAGQMMLTASAQTWVQVRVAGGPVIY 299 Query: 277 SGMQRKDGNLNL-TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR 326 + + + ++ + L +G + + G V R V R Sbjct: 300 DHILQPGESWSVPPDRTNLLLTVGNAGGLVLSADG--VTTQPLGRNGAVVR 348 >UniRef50_C1D1C0 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1C0_DEIDV Length = 342 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 102/339 (30%), Gaps = 33/339 (9%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LR ARE GLS Q +A R ++ +R +E+ TF R Y++ YAR + I Sbjct: 4 GDALRQAREAQGLSTQDLALRTKIRGDYLRALEDGNIALLPERTFARSYLQRYARELKID 63 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 LL ++ P S + ++ + L++ G + Sbjct: 64 PAPLLADFDRSVPSTQDLGMTRPSRTAAPVSRRASPLVALLAGLLVLGGAGYGVYRYLAP 123 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST---------------- 179 S+ +++ P+ T + + S Sbjct: 124 GIQTGSPTEAAQAGSTPVPATDPTPAAPEPVRTVKLSVSSVPSGARVYLDNRDLGLTPLR 183 Query: 180 -------PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 A + T Q + + ++ P Q + PT Sbjct: 184 SFPVEAREDAQLRVEYTGRQPLKQSVSLTQGRNLRARLLPPGQGASELTDLAVPTPKPVV 243 Query: 233 DGAAPLPT------DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNL 286 P + A + + FTA+ W VTDA+G+ L+ G+ Sbjct: 244 KPGVPASGGGPAENSVTTPSPEAAPGTPVSVQFTAEAWTRVTDASGRVLYEGIPPAGTRK 303 Query: 287 NLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVA 325 ++ G AV++ +G QV Sbjct: 304 GFPAG--VTVRTGNAGAVRVSVKGSAF--KALGEAGQVV 338 >UniRef50_Q5FUT7 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FUT7_GLUOX Length = 423 Score = 151 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 108/339 (31%), Gaps = 21/339 (6%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + ++ + G LR RE+LG + VAE L ++ + +E D + Sbjct: 6 SNRPFSQPSDQPSVGTVLRARREELGWRLEDVAEWLRIRPKLLAALEADDLSKLPGVAYA 65 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 G++R+YA + + + L+ + + A + L + + D L + Sbjct: 66 VGFLRTYAHAMQLDADALVERFRRD-----TRGAVTRKPELVFPQPESDRGLPVGVLVGA 120 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 +V+ ++ W + + + + P S A T P Sbjct: 121 GLVVVVAAYVGWYRFTEHDNPAQRQVPAVAELMPGAATPAMTSPQVASVMPGRAPTPEPH 180 Query: 182 ASVDTTAT-------------NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228 A V ++ AP+ A S + D + P P Sbjct: 181 APVTASSVPATPAPAVAPTQNAPAPDVSAAPSVAQSTPSTVAPSVAPLASDDDSEPLPAG 240 Query: 229 ATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL 288 P A A P A+V+ A W +V D G L S + + + Sbjct: 241 EAAPSQQAGAIGQPATDLPPAVPEGAVVLRALAPVWTQVRDRDGHVLMSRVMQPGESWQG 300 Query: 289 -TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR 326 AP+++ G + + G + + QV R Sbjct: 301 DPAGAPFRMSFGNAGGIVLTTAGATS--APLGKEGQVRR 337 >UniRef50_C0EJV6 Putative uncharacterized protein n=4 Tax=Neisseria RepID=C0EJV6_NEIFL Length = 294 Score = 151 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 103/324 (31%), Gaps = 45/324 (13%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N + +D A T G LR R + Q VA RL L + +E+ + F+ Sbjct: 4 NDKINYDTQAAKTLGDELRKHRTDAKIDIQDVASRLKLSTEQIDALEKGEYSGFPGLVFV 63 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAP--MQSFSLGKRRKKRDGWLMTFTWL 119 GY+RSYAR + I E+ + L P V + + + Sbjct: 64 SGYLRSYARFLKIDEQTIAKHLLSITPQLEDHVYAVTRSANTGLSYTDTEKQGFPKWILG 123 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 + + + + G ++WQ + + + E + + T T Sbjct: 124 IAALALAVGGVYFWQSKSSFENEQANIQNSKDV---------------------ADTMKT 162 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 P D A + T + T P A + Sbjct: 163 PALKTDNVAVSEMT----------------------EDGKKEITNKPEVANDQAASEASA 200 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 Q + + L + L +TD GK +FS + L G APY + IG Sbjct: 201 VAQEEKPAVKVEKDELWIKVQYRSNLIITDKDGKVVFSRIVPAGSEQRLRGGAPYNVWIG 260 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQ 323 A + Y G P++ ++ + Sbjct: 261 IAAGSEANYGGTPIEPLKYRVAGE 284 >UniRef50_A2SHB6 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SHB6_METPP Length = 304 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 112/330 (33%), Gaps = 26/330 (7%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ A T G LR ARE G+ +A L + + IE D +TF Sbjct: 1 MSEGTVDAGPPATTAGKLLRAARESQGMHLAVLAASLKVSPQKLEAIENDHPEQLPDATF 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 R +S R + I E +L L P A+ + + G + D + + Sbjct: 61 ARALAQSMCRALKIDAEPVLSLL----PTAASAGRGLDHVARGLNQPFHDRGVPS----- 111 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + Q+ + + L++ + V + S Sbjct: 112 -------------DGDEWQRFLSPPLIAAAVLVLAAVAVYLLPVGWVGRLLPTDPSASAV 158 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P + +T + + A + A+ S A AP +A + Sbjct: 159 PEIAASNPIDTGVAVSSTTSIAPESASPALAGASAVGSSEAEAAAPGSAVIDTVFSAPVG 218 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 A + M A+ W+EV DA G+ L S L G P ++ +G Sbjct: 219 TAASASAAGGLL---TMRAVAESWVEVRDAKGQVLLSRTLAAGEAAGLDGPLPLRVTVGN 275 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A QI ++G+PV LS R N VARL L Sbjct: 276 AEATQIVFRGQPVALSESTRDN-VARLELK 304 >UniRef50_C6PDY6 Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PDY6_CLOTS Length = 271 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 89/308 (28%), Gaps = 60/308 (19%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G L+NAR + G++ + E ++ ++ IE+ A + +G+++SYA V Sbjct: 3 ELGDILKNARLKKGMTLDDLQEITKIRTKYLKAIEDGDFGVMPALVYAKGFVKSYAEAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK------RDGWLMTFTWLVLFVVIGL 127 I ELL K Q KK L+ V+ V + Sbjct: 63 IDPYELLNKYSYLFEDEKDKEEERQYVKPDIEEKKAFDIFESLRKLVKPFIGVIVVCLFA 122 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 G ++ N PL +T + TTS P + + T Sbjct: 123 FGIYYM----------------------VNQINRGLAPLPDTTQSSKDTTSKAPDNKNNT 160 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 +N TT ++ Sbjct: 161 TSNDVYNNN------------------------------VKTTTFSVINSTKSEVDYKVV 190 Query: 248 PVADPNALVMNFTA-DCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 P D + ++ CW+ V G + + + ++ +G P +I Sbjct: 191 PAGDSYKVDLSIPGQKCWVSVK-VDGASTYQYLMTSGMTKTFDVKNNIEILMGNPPDAKI 249 Query: 307 QYQGKPVD 314 G+ + Sbjct: 250 TVDGQEIP 257 >UniRef50_C2ETS7 Possible transcription regulation protein n=2 Tax=Lactobacillus RepID=C2ETS7_9LACO Length = 354 Score = 150 bits (377), Expect = 8e-35, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 46/328 (14%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 + +D + + G +LR+AR+ G + + + ++ + IE++K ++R + Sbjct: 2 SENDNEQQIQIGKKLRDARQAKGYTLDDLQQLTKIQKRYLIAIEDEKFDELPGDFYVRAF 61 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 I+ YA V + ELL +Q P + + R R Sbjct: 62 IKQYADTVGLDGNELLKEFNEQLPKAKTEEYSDHISQAVETRANRRK------------- 108 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 S + T V Sbjct: 109 -----------------------------TVSQGVSKVRQYMPTIIIACVIVIVLAAIWV 139 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 Q + +V + S + ++ P +AA A+ Sbjct: 140 TAIVRGHQDASTKIDNSSVSVSGESRKKSSSSVKKSSTKPKKSAAIKLTEASRNNNSVTY 199 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ---APYKLKIGAP 301 + L + + W VT G S + N+T + + +G Sbjct: 200 NAASLKKDAKLQIKTSGRAWNSVT-TDGTSALSRTMDANSTANVTIKRTTNTVVITVGNA 258 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTL 329 +A ++ K ++ + R N +T+ Sbjct: 259 SATTLKLGNKKINFTDNGRYNNTRIVTI 286 >UniRef50_D0XYY9 Transcriptional regulator, XRE family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XYY9_9CAUL Length = 362 Score = 150 bits (377), Expect = 8e-35, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 103/317 (32%), Gaps = 17/317 (5%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 Q+E GA L+ ARE GLS Q VAE ++ V +EE + A + F GY+R+Y Sbjct: 35 QHEPADIGAALKAAREARGLSLQQVAEATRIRQGYVEALEEMRLEALPSRPFTIGYVRAY 94 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 A L+ + + + + AP A++ R++RD L + VV + Sbjct: 95 AALLGMDGDTAVARFKTDAPDEGAELRE-----PVGVRRERDPRLALILAGGVLVVGAIL 149 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 Q +A + + + V + + ++ P TT Sbjct: 150 LWNVAQR---------AIAKDQPPQQIAPAAASTQVQAHANNSSVALGAPLPAPVESTTP 200 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 +TP + A A + A A AP + Sbjct: 201 EPYKTPGLDDAAANGGSVDAAKAAAKARAEADARAGIVDPAHQVQVGAPFKPRGVMLGAA 260 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY 308 + + +V+ L V G+ F+ + P ++ Y Sbjct: 261 QGEGSGVVLQARKPATLVVRGVDGQVYFARALTAGDAYRAPRTPGLIADVSDPMVFEVYY 320 Query: 309 QGKPVDLSRFIRTNQVA 325 G L + +N A Sbjct: 321 GGA---LVSHLPSNSTA 334 >UniRef50_C7THU0 Xre-like DNA-binding protein n=8 Tax=Lactobacillus RepID=C7THU0_LACRL Length = 311 Score = 150 bits (377), Expect = 9e-35, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 93/318 (29%), Gaps = 25/318 (7%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR+AR + G + + + ++ + IEE A ++ +I+ YA V Sbjct: 3 EIGQKLRDARIEKGYTIDDLQQITKIQKRYLIAIEEGHFDALPGDFYVLAFIKQYADTVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + +ELL ++ P + QS R + + Sbjct: 63 LDGDELLTQFQQDIPEPQPQEYAAQSVENKTRATRAEEASPV------------------ 104 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + ++ + T PA + + S +++ Sbjct: 105 --NRLRRYLPQIAIAAFVIVAIIVIYVVMLFSQSGPKQTIPADSESVAVSSKRSSSKASK 162 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + T+ + + S S + AA T + N Sbjct: 163 SSKTSSSSKSSKSSASSSSKSSEKASKESKKKSDKLDISVAAANGATQAVTLKNLPTSGN 222 Query: 254 ALVMNFTADC-WLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAVQIQYQ 309 L + W+ V G + G +T + ++++ G A I+ Sbjct: 223 KLTLGANGATAWISVI-VNGSTTWQGSLTSGNTQEVTLPDNTSTFQVRSGNATATTIELN 281 Query: 310 GKPVDLSRFIRTNQVARL 327 GK VD+S + Sbjct: 282 GKKVDISNGTSVVRTITF 299 >UniRef50_Q38YE1 Putative uncharacterized protein n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YE1_LACSS Length = 307 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 95/324 (29%), Gaps = 29/324 (8%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR AR + G + + + ++ + IEE A + ++R +I+ YA+ V Sbjct: 3 EIGQKLREARIEKGYTLDDLQQITKIQKRYLSSIEEGDFDALPGTFYVRAFIKQYAQTVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + E LL + + P + +S R + W Sbjct: 63 VDSEALLAEYQDKLPNAKPEEYVEKSVENQTRLTRETTDSKWSKW--------------- 107 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + + + N + T ++ +V + T+ Sbjct: 108 -------RGLAPQIAVVAVVIVIVGIVYGITLSNRGKNRETLTETSSSVTVSGDQSTTKK 160 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 + + S + A + Q T Sbjct: 161 ASSDDNQQKAQESKAKEASKASEQSKKEADKKAKETKLSASMTSMSGSQQAFTIKNLPNK 220 Query: 254 ALVMNFTAD---CWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAVQIQ 307 A + F+A+ W+ + G ++ G + G + +K G A +++ Sbjct: 221 ANTLTFSAENTTAWVGLI-VNGSTIWQGSVTPGTDQTTQLPAGVTQFSVKTGNGPATKMK 279 Query: 308 YQGKPVDLSRFIRTNQVARLTLNA 331 V+L+ T QV + A Sbjct: 280 INDTAVNLNPNNETVQVRTVNFTA 303 >UniRef50_B9ZLM4 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLM4_9GAMM Length = 404 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 105/335 (31%), Gaps = 24/335 (7%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 LR ARE GL +A R+ L T+ D+E ++ A ++RGY+R+ AR + + + Sbjct: 70 LRRAREAAGLDTATLAHRIHLGRGTLEDLEANRFDHM-APAYVRGYLRACARELGVNADP 128 Query: 79 LLPGLEKQAPLRAA-------------KVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 L E + + L L + W Sbjct: 129 WLRAFEGHGLTEPELRAVATASARSKRRRRSSAPYWLAFLLVLALLGLGVYAWTERGGGT 188 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + W + + ELS+ + T + Sbjct: 189 PSFPSLGWLEDDRSAPSEGAVDRAPHDELSAPPALVEEAEPEPEAPVAAETDGEASETEA 248 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 + +T P P D + A+ DT + + Sbjct: 249 ERDSEPAMDTLTEPMPTEDTAADDTAPEDTASEDTVESSGSGPVSEMALLTGGARAVPDP 308 Query: 246 TTPVADPN----------ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK 295 A+PN LV++ T W+E+ +A + + +G+ L P + Sbjct: 309 EEDGAEPNGGEAGRDGVYRLVLDVTETSWVEIRNADDEVVLTGVLSSGDREELELTLPGR 368 Query: 296 LKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 + +G V++ G+ D +R+++ AR L Sbjct: 369 VVLGNARGVELTLDGESFDFETHVRSDRTARFDLE 403 >UniRef50_A7NIS6 Transcriptional regulator, XRE family n=5 Tax=Chloroflexaceae RepID=A7NIS6_ROSCS Length = 279 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 89/323 (27%), Gaps = 54/323 (16%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 +N G RLR ARE G+S A + + +E+ ++RG+IR+ Sbjct: 10 QENAMSQLGERLRAARESQGISLSQAAAETRILQRYLVALEDGDYQNLPGDVYVRGFIRN 69 Query: 68 YARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 YA + + +EL+ + + G + V FVV+ L Sbjct: 70 YAAFLGLSADELIDLYRYERGRTDP-----IRIVPATSNPRVRGCIAPSLVGVFFVVLAL 124 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 G + + + T PA + P A + T Sbjct: 125 VGVTYLVLSATNRIGENAQL-----------------ATIPTATIPPAPSPLPTALPEAT 167 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 PA A A + + S + P Sbjct: 168 PVPIIIPATATVAVAGGVIEPSPTSTQEPEAPIVLEVRIDPGDNPG-------------- 213 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 WLE+ G+ +F + ++ T + ++ G A V + Sbjct: 214 ---------------SWLEIK-TDGESVFRRVLAPGRSVRFTARRSVSVRAGNAAVVTVV 257 Query: 308 YQGKPVDLSRFIRTNQVARLTLN 330 + L R +V Sbjct: 258 INDQERRLG--TRPGEVVTFEWP 278 >UniRef50_UPI0001692BFA hypothetical protein Plarl_10797 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692BFA Length = 335 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 109/331 (32%), Gaps = 58/331 (17%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G LRNAR + LS + + E ++V + IEE S ++R +I+SYA + Sbjct: 3 ELGQFLRNARLEKKLSLEELQEMTKIRVRYLEAIEEGDYKVLPGSFYVRAFIKSYAEAMG 62 Query: 74 IPEEELLPGLEK------QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 + E+L +K + + P G R + + +V FV + + Sbjct: 63 LDPNEVLDMYQKVNPVPEEPEHAPEPLRPRSRSGGGPRSSDQTSKWASTVMVVCFVALIV 122 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 +++ + +S +T T P + Sbjct: 123 GIVYFFAYQG------------------------------SSGSTGGNTPEASPNRLTEK 152 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 + + +P+ + A A +A++ T T G L Sbjct: 153 QSESPSPSSSPEASATPQPTPTPTPTPEASLKQTETTKSLDTYTVSGTNKL--------- 203 Query: 248 PVADPNALVMNFTADCWLEVT---DATG---KKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 + + W ++ D G K + + + + + T + + +G Sbjct: 204 ------EIELKAKDKVWYQIDQLLDTKGTKKKLIKTETLGQGLSASYTVEGGVFINVGKQ 257 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 ++++ G+ +DL +V + L ++ Sbjct: 258 NSIEVTVNGQKIDLGNASNPKKV-KFLLESD 287 >UniRef50_O31771 Uncharacterized membrane protein ymfM n=9 Tax=Bacillus RepID=YMFM_BACSU Length = 288 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 97/316 (30%), Gaps = 35/316 (11%) Query: 28 LSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQA 87 +S + ++ + +EE ++R +I+ YA V + ++L +K Sbjct: 1 MSLDDLQAATKIQKRYLTALEEGNYDIIPGKFYVRAFIKQYAEAVGLDADQLFEEHKKDI 60 Query: 88 PLRAAKVAPMQSFSLGKRRKKRDGWLM---TFTWLVLFVVIGLSGAWWWQDRKAQQEEIT 144 P + + +++ +++ + + + A + + + + Sbjct: 61 PNTYHDDVSEKISGMNLQKEMPKPASKALELLPTILVILGVIVVIAIVYAIIQFANHKNS 120 Query: 145 TMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVD 204 + +S + + SE +P +++ + +S Sbjct: 121 DDHNAASEKAITQSESKYEIPKDSTLKENQNNSSEKE----------------------- 157 Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 + + + + AA AD L + + W Sbjct: 158 -----TDTKKETKENEDKKKENDSEKLEIKAAGTEGSLTTYEVSGADKIELELKASDSSW 212 Query: 265 LEVTDATGKKLFSGMQRKDGNL--NLTGQAPYKLKIGAPAAVQIQYQGK--PVDLSRFIR 320 + V D L G +KD ++T Q ++ G ++I+ GK +L Sbjct: 213 IRVRDENSSSLKEGTLKKDETYKKDITDQKQVDIRTGYAPNLKIKINGKVLSYELDPKKV 272 Query: 321 TNQVARLTLNAEQSPA 336 Q ++ E+ + Sbjct: 273 MAQTIKIVNKKEEKSS 288 >UniRef50_A6FNN0 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=17 Tax=Rhodobacterales RepID=A6FNN0_9RHOB Length = 408 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 106/345 (30%), Gaps = 35/345 (10%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G +R R LG S V L +K + V IE A F+ GY+RSYAR + Sbjct: 25 IRLGDLMRGERATLGKSLLDVERELRIKAAYVAAIENADPDAFDTPGFIPGYVRSYARYL 84 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKK------------------------ 108 + + K++ A ++ S+ K++ Sbjct: 85 GMDPDRAFDAFCKESKFSIAHGMSAEASSIRKQKSSFKTAAPNRKSDPLMSPGTPFAPAS 144 Query: 109 -----RDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQS 163 R + +VL +I G W Q + + L+ + Sbjct: 145 EGILARVEPGAIGSVMVLVALISAIGYGGWAVLNEVQRVQFAPVENTPDVLADLDPLEGA 204 Query: 164 VPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAAT 223 + +DP T+ ++ + + P + + + + A V T Sbjct: 205 ITPAPDGDSDPVRTAGGFLPPESDSIDRLYRPEALDVPVMVARDAPISTLDPAQVGTLRP 264 Query: 224 PAPTAATTPDGAAPLPTDQAGVTTPVADPNAL---VMNFTADCWLEVTDATGKKLFSGMQ 280 P + A A TP + L + W+ V G +F G+ Sbjct: 265 ELPQTDRSSSFAVAGNQPSAVPGTPQVVEDPLPGVRVVAVRPAWVRVRAGDGSVIFEGVM 324 Query: 281 RKDGNLNL-TGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 ++ T + P +++G AV G+ + V Sbjct: 325 NAGDTYDVPTTEEPPTIRVGESGAVYFTVNGQHY--GPAGASGSV 367 >UniRef50_Q1AW44 Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW44_RUBXD Length = 304 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 84/320 (26%), Gaps = 37/320 (11%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + L G L+ AR GLS V + ++ + +E + + +++G+++ Sbjct: 13 EEDGGGLRIGEILQEARRDRGLSLHEVEQATKIRKRYLEGLEREDYSVLPDAVYVQGFLK 72 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 +YA + + E L L+++ R + Sbjct: 73 TYANYLGLDGERLSQELKRRRSPRRERRMNHAVPG------------------------- 107 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + + + + AE S + Sbjct: 108 ---------SSGFDKPLISPGGLAEAERSRFAPAVALTLAVVLLVAAVIGALYYVGQSSQ 158 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 A++ A + + + PAP + + Sbjct: 159 RASSPPEQQAAPAAGGGERPAEEAGGGQRDGGEAQRGPAPEQRRAEERQPAAGEEANAGE 218 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 LV A W+ + + G ++ G+ + L G AV++ Sbjct: 219 VSPETLEVLVSVEGAPSWMSIQ-SDGSVVYEGIAEPGFSQTFEASQEVTLTTGNAGAVRV 277 Query: 307 QYQGKPVDLSRFIRTNQVAR 326 + G+ V +V Sbjct: 278 EVNGQSV--GVLGGDGEVLT 295 >UniRef50_Q21KT4 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KT4_SACD2 Length = 331 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 116/338 (34%), Gaps = 27/338 (7%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + GA+L+ R + L+ + + + VS V+ +EE++ TF Sbjct: 10 MSESQELTASPNDGVGAKLKAIRLEKKLNIEDFTKLSAITVSKVQALEEEQYRKVGTETF 69 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPL---------RAAKVAPMQSFSLGKRRKKRDG 111 + GYIR YA + + + L+ + Q + ++ K Sbjct: 70 VIGYIRKYATWLGVDADALVNEYKSQIGESALPNVLVTTEQPLPDTAPKPKSEKVLKPVP 129 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 + L + AWW I T+ S + ++ + T Sbjct: 130 AHVDVPQGQLINKLKAIPAWWILALLVGLWLIGTLVFVPSVDREQEEQELPAQVEAKRET 189 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 P P S ++ AA Sbjct: 190 PAPEVIEEPAQ-----------------VETEQQVDIVEQSIEDTSIIEAAEVQTQQVQA 232 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ 291 P+ + + A A + LV+ FT DCW+E+ +A+GK +F+ +Q L L Q Sbjct: 233 PEAVERVNSAPANAVGQPAALDELVLTFTDDCWVEIKNASGKIIFAAVQTPADTLTLADQ 292 Query: 292 APYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 AP+++ +G AV ++ + +++ + R T+ Sbjct: 293 APFEIMLGNARAVAVKMNDREIEVQP-RPGRKTLRFTV 329 >UniRef50_Q21W27 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21W27_RHOFD Length = 312 Score = 148 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 104/315 (33%), Gaps = 27/315 (8%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 GA LR ARE GL A+A L + VS + +E D+ + F+R S R + I Sbjct: 25 GAMLRMAREAQGLHIDALAVGLKVPVSKLEALEADRFDLLPDTVFVRALAASICRTLKID 84 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 +L L + A + +W Sbjct: 85 AAPVLEQLPRTAAPLLKTDESGINTPFRPSGDG-----------------LGLSSWHQLS 127 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 R + + + +Q + + +T A + PAS DT + + Sbjct: 128 RPFVLAVLALLLGIAVLVFFPFGQQTEVASAPENASTVSAQPLSAPASPDTEDSVSVEAT 187 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 + A + V +N A+ AA++P P A L Sbjct: 188 APSSATNFALSGSEVAVAQNSNTAAASDALQGAASSPPVIVPGSG---------ATTGML 238 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 + W+EV D+ + ++G P + +G A ++Q +GKP DL Sbjct: 239 IFKARGSSWIEVVDSNRVVQVRKTLSDLEVVGVSGALPLSVVVGRADATEVQVRGKPFDL 298 Query: 316 SRFIRTNQVARLTLN 330 + I N VAR + Sbjct: 299 TG-IAKNNVARFEVK 312 >UniRef50_A0LV12 Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LV12_ACIC1 Length = 273 Score = 148 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 105/331 (31%), Gaps = 65/331 (19%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 ++ G L ARE+ GLS + VA R L+ S +R +E D + R ++R+ A +V Sbjct: 1 MSIGQSLAEARERAGLSIEDVAARTRLRASVIRAMENDDFSLCGGHFYARAHLRTLAGVV 60 Query: 73 HIPEEELLPGLEKQAPLRA-----AKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 I LL + + AK+A +++ S R + + + +++ + Sbjct: 61 GIDPAPLLAEYDARYGRNEDDDVTAKLAEVETASKLIARTQELRRTSWGSLALAALLVVI 120 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 A Q + + + P ++ + Sbjct: 121 IVAVGAQLLTSHGR---------------------------TPSRASGPVGAPSSASGPS 153 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 + TP+++A + P +PS A + T Sbjct: 154 PSAAATPSISAVPSSGSPSPPPTGAPSSAVAEAGVKVVVRVTT----------------- 196 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 A CW+ + G L+ G+ T LK+G A + Sbjct: 197 -------------AKCWVLARASDGTTLYQGIMNPGDVQTFTDPQQIYLKLGNAPATDLV 243 Query: 308 YQGKPVDLSRFIRTNQVARLTL-NAEQSPAQ 337 G V++ TN VA T + Q Sbjct: 244 VNG--VEIGAPPSTNDVAAFTFGPGPPNVGQ 272 >UniRef50_Q3A2Z7 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2Z7_PELCD Length = 311 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 116/319 (36%), Gaps = 38/319 (11%) Query: 1 MNTEATHD---QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 M+ +T D + + G +L+ RE +GLS QAVAER ++ + +R E+D A A Sbjct: 1 MHDTSTEDSPAEVPVASLGKQLQERREAMGLSLQAVAERTRIRSAYLRSFEDDDYEALPA 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 + + G++R YA L+ + E+ L A A ++ + + + G Sbjct: 61 AAYAVGFLRQYATLLGLDAEQALKEFRGAAQSVAQPLSQLPTPENSGTELEPAGKKRPGF 120 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 + L + +G W +E +P++ + T Sbjct: 121 PIWLLIALGAILVAGWLFYVENRE--------------------TWIPVSKESATPALPA 160 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 S P A + + ++ ++ A P + A A+V + A Sbjct: 161 SEPAAGISASQSSMKSDAAPEPQSSPPSASEASAPVQDADVPVETSEA------------ 208 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 ++ A + A + W+E+ +A + L + + + T +++ Sbjct: 209 --SEDALIFPLPAGGAVFRIASKGSGWVEI-EADRRPLQNYDMQPGTRVEWTVHDFAEIR 265 Query: 298 IGAPAAVQIQYQGKPVDLS 316 + P VQ G+ V L Sbjct: 266 VSIPGGVQAWLDGREVSLP 284 >UniRef50_B9Z686 Transcriptional regulator, XRE family n=2 Tax=Chromobacterium group RepID=B9Z686_9NEIS Length = 295 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 46/333 (13%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + + + + GA L+ ARE GLS VA+RL L + + IE D+ A + F+ Sbjct: 5 TEQNSTLPPDRDSVGAALKAAREAAGLSLGEVADRLKLSLKQLEAIEADRFEALPGAAFV 64 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVA----PMQSFSLGKRRKKRDGWLMTFT 117 RG++R+YAR + + L+ LE++ P +VA +++ S+ ++ G L Sbjct: 65 RGFVRNYARFLGLDAVPLMARLEERFPSSVKEVANLSKEVEAASVVSEPEETSGLLGKRA 124 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L++ VV+ +GA+W+ + P T Sbjct: 125 ILLVLVVVLAAGAFWFAR-----------------------PGSEPAKDEAKQDLAPMLT 161 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 AS A + + AP P P+ A A+ +A T Sbjct: 162 EQSTASAPVEAEPVKGASAAVTAPEPAPVPAPAAKPAPAVAAAPASAPVSAPPT------ 215 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 A + + D W+ V D +GKKL + + GQ+P+KL Sbjct: 216 ------------AGGGTVKLIAKQDAWVSVIDGSGKKLVFETLKAGAAKEVVGQSPFKLT 263 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G V++ + G+PV ++ IR ARL L Sbjct: 264 VGNATQVEVSFNGQPVVMTGKIR-GTTARLELK 295 >UniRef50_A1B324 Putative uncharacterized protein n=3 Tax=Rhodobacterales RepID=A1B324_PARDP Length = 406 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 102/337 (30%), Gaps = 24/337 (7%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 + + G +R R LG S V L ++ S V IE A +F+ GY+RSY Sbjct: 24 DDPDIRLGDLMRGERATLGKSLLDVQRELRIRASYVAAIENCDISAFDTPSFIAGYVRSY 83 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG----------------- 111 AR + + + +++ + + +R+ D Sbjct: 84 ARYLGMDADWTFRRFCQESGFQPTHGMAPSAAGPKPQRRPSDPAEALANPHPIFLPRQES 143 Query: 112 ------WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVP 165 + LV+ V+ G W + Q+ T DQ+ +++ ++ Sbjct: 144 VWNSIEPRAIGSLLVMVVLACGLGYGGWTVLQEVQKVNLTPGDQAPGVIAALDPVQEAAE 203 Query: 166 LNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA 225 T + + P + A + + +P+ Sbjct: 204 PETVESAQVNLPRPEGLDRTYRPQALEVPVLMARDGPIAAIDPGLNAPAMQPEGAEPVAR 263 Query: 226 PTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGN 285 A +P +QA V T D + + W+ VT A G L Sbjct: 264 IAAVQDRVHGPQMPAEQAAVRTVAPDAPEVEILAARPAWVRVTSADGTVLLEKTMDAGER 323 Query: 286 LNLTG-QAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 L +AP L+ G A+ G+ + Sbjct: 324 FALPKLEAPPVLRAGNSGAIYFAVNGRTYGPAAPGAK 360 >UniRef50_B7GJN6 Uncharacterized HTH XRE-family DNA-binding protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GJN6_ANOFW Length = 286 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 94/323 (29%), Gaps = 58/323 (17%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 G RL+ AREQ +S + E ++ + IE+ ++R +IR YA Sbjct: 3 PLTELGKRLKEAREQRNMSLDDLQEITKIQKRYLIAIEQGNYVIMPGKFYVRAFIRQYAE 62 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDG-----WLMTFTWLVLFVVI 125 V + +EL + P + P + + R+ G L L V + Sbjct: 63 AVGLDPDELFEQYANEIPNAQQEELPGELSRVKSRQLSEQGEKVLDILPKILIGTLAVGV 122 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + +++Q R ++ + ++ + S Q + S Sbjct: 123 AVVLWFFFQSRTVDEQPQEQVINEKTEFEQSEQVNEQQPEKQNEQQPEKEKEQQEQPSAA 182 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 + Sbjct: 183 MVKVVDTNGRKSTLEVM------------------------------------------- 199 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKD--GNLNLTGQAPYKLKIGAPAA 303 A+ + + D W+EV + GK M + +LT + L IG Sbjct: 200 ----AEQLIIDIATKGDAWIEVKNGKGKAFTRKMMYANQAETFDLTNETEVLLVIGQTLN 255 Query: 304 VQIQYQGK----PVDLSRFIRTN 322 +++ G+ PV+ S +R + Sbjct: 256 TEVKINGQTLQYPVNPSDHVRQD 278 >UniRef50_B6IUT5 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IUT5_RHOCS Length = 413 Score = 147 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 50/371 (13%), Positives = 102/371 (27%), Gaps = 54/371 (14%) Query: 8 DQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRS 67 +++ G LR R +LG ++E L ++++ + IE+ + ++ G++RS Sbjct: 30 PRHDIRHVGELLRQRRLELGYDLPQLSEMLRIRLNYLEAIEQGRWADLPGQAYVTGFLRS 89 Query: 68 YARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGL 127 YA + + +L ++ + R ++ L V G Sbjct: 90 YATAMELEPGPVLRRYKEDTAGAPPPAELYFPEPANESRVPGGALILIALLAGLVVYGGW 149 Query: 128 ----------------------SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVP 165 + + + L S+ Sbjct: 150 YMLSASDRSLSDMVPALPDRLAGLIYGDSAPEESPAPAAVLPPGQVEALVGQSQPTAPEV 209 Query: 166 LNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPA 225 + + PA + + + + PA AP+ P Q +P++ + + Sbjct: 210 GASVDQSAPAQPPSAQSPSGQSPSVQPAPAGPQTAPSSVPGQTTAAAPAEPQGEAEESEV 269 Query: 226 PTAATTPDGAAPLPTDQAGVTTP------------------------------VADPNAL 255 P A P + + Sbjct: 270 PQLPDLGSPAVPPSAAEEPEAPAEVAEAQQEPAASAAPSPPPAAPPPGRVFGQTDGTVRV 329 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDL 315 V+ T D W++V D G S + R + + G + + G+ DL Sbjct: 330 VVRATEDSWIQVRDGKGTLWASRVLRPGDSFRAPDVPGLVMNTGNAGGLVVSLDGQ--DL 387 Query: 316 SRFIRTNQVAR 326 QV R Sbjct: 388 PPLGGRAQVMR 398 >UniRef50_Q1NPX4 Helix-turn-helix motif n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NPX4_9DELT Length = 333 Score = 147 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 108/323 (33%), Gaps = 22/323 (6%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 L+ G RLR AR G+S AE + + +T+ +EE+ A + RG+IR YA + Sbjct: 28 LSLGERLRRARSAKGVSLAQAAEAIRIHATTLAALEENNREGLPAQVYTRGFIRIYASYL 87 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFV-----VIGL 127 + +E L ++ L AA + + T +F+ V+ Sbjct: 88 GLDPDEALRLHIEEQGLPAAATTEKINIQQIMAAESMAEAPRRITGNHVFILLLLLVLAF 147 Query: 128 SGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTT 187 G W + + E TMA E+G PL TT A T + Sbjct: 148 VGYWAYTSQSRIGETDDTMA-----------EKGIFDPLADEMTTPEAAAPTELPELPQA 196 Query: 188 ATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT 247 + + + V A ++ AT P G+ D T Sbjct: 197 LLAPASAPADSASNGEPEPTVGSVPEPPATGESNDGAEEPVATPPAGSEETAPDAEAATE 256 Query: 248 PVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQ 307 + + L FT D WL V + + +++IG V + Sbjct: 257 AL---HLLEAYFTEDTWLRVK-IDDEPARQLFFEAGASRQWRADERIEMRIGNAGGVDLV 312 Query: 308 YQGKPVDLSRFIRTNQVARLTLN 330 + G P L + QV L L Sbjct: 313 FDGTP--LPALGPSGQVVNLDLP 333 >UniRef50_Q608X3 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q608X3_METCA Length = 294 Score = 147 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 107/301 (35%), Gaps = 43/301 (14%) Query: 30 QQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPL 89 VA L L V TV +E D + F+RGY+R YARL+ +PE+E++ + A Sbjct: 32 IDKVARELHLSVGTVGALERDDYASLPPPAFVRGYLRGYARLLGLPEQEIVDAYNRVAGG 91 Query: 90 RAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQ 149 + + G+ W V++G++G W +Q ++ Q + Sbjct: 92 GS--DPEPGAVVRGQSEASPTSWFGPL----GLVLLGMAGIWGYQHWRSSQISGEAPS-- 143 Query: 150 SSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNA 209 SE P T PP +N A +PA P + Sbjct: 144 ----PVELSEPVPVEPAVNGTAMPGREEVAPPTGGPAPVSNPMAAADALGSPAASPYPST 199 Query: 210 VVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTD 269 PS + + L ++F+ + W VTD Sbjct: 200 QPQPSPQPLQPEV------------------------------DTLTLSFSGESWASVTD 229 Query: 270 ATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 A GKKL + + G+AP+K+ +G PA +++ G+ D + AR + Sbjct: 230 AEGKKLLFENVTEGQVKTVQGKAPFKITLGRPADTHLEFNGQAYDHG-YKTNRTSARFIV 288 Query: 330 N 330 Sbjct: 289 P 289 >UniRef50_A8U7Q8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U7Q8_9LACT Length = 285 Score = 147 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 100/330 (30%), Gaps = 58/330 (17%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +L+ AR+ G + + + ++ + IEE + R +I+ YA V Sbjct: 3 EIGEKLKEARKAKGYTLDDLQQMTKIQKRYLIAIEEGNYDVMPGKFYARAFIKQYADTVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWL-------MTFTWLVLFVVIG 126 + ++LL P + + + R K + T L+ + + Sbjct: 63 LNGDQLLEEYTDAVPHTHDEEYVEKVSTDQTRSGKNTENVFLTKVQEYLPTILIGLLAVA 122 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + A ++ K + M + S E++ +S S + +++ A + + Sbjct: 123 IVAAIYFAVIKTNNQGNEDMITKESDEITVSSADSISEEESVKESSESAVSEESEEAQGI 182 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 ++ T + + Sbjct: 183 ELLSSNGSTTTYSVTGIFEGSS-------------------------------------- 204 Query: 247 TPVADPNALVMNFT-ADCWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPA 302 L++ + D W+ V + G + + + NL G + + IG Sbjct: 205 --------LILTASGGDSWVSV-EGDGTTIDAQLITDGSNLETEIPDGTSSLVVIIGNAP 255 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 A ++ + GK V + + + E Sbjct: 256 ATKVNFNGKDVPYAPEAENSVRQEIEFKFE 285 >UniRef50_A5G5P0 Helix-turn-helix domain protein n=2 Tax=Geobacter RepID=A5G5P0_GEOUR Length = 277 Score = 147 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 105/333 (31%), Gaps = 60/333 (18%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M E GA L+ RE GL VA+ + + + IEE + + Sbjct: 1 MLPETNTAIRTGTPVGAYLQEIRESQGLQLDDVAKVTRISKNYLVAIEEGMFEKLPNAAY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWL 119 ++G++R YA ++ + E++ + +AP+ QS + + + Sbjct: 61 VKGFLRLYAGVLGLSGNEIIAMYDSARAPVTPPSAERPQSKHVETIKTGGRNRWI----- 115 Query: 120 VLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTST 179 + ++ ++ L E+ P + + A + Sbjct: 116 -------------------LPLLLLSLVLMAAFFLQEKDEKRGITPPPSYSKPQVAVLPS 156 Query: 180 PPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLP 239 P V ++A + A+ + A AV+P N +++ + Sbjct: 157 PLQPVLSSAKISSEKAIESAASAVNPASNELIAGGE------------------------ 192 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 P L + F D L VT + + + + L +G Sbjct: 193 --------PRPKGVFLKLKFNQDSSLNVT-IDDSISQHYELKSGDLIEWKAEKSFTLDLG 243 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLNAE 332 V+ ++ G P L F A + L A+ Sbjct: 244 NAGGVEAEFNGNP--LKPFGAAGVPAHVVLKAD 274 >UniRef50_B7A9Q8 PEGA domain protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9Q8_THEAQ Length = 287 Score = 147 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 64/317 (20%), Positives = 98/317 (30%), Gaps = 32/317 (10%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G RLR ARE GLS + AERL LK + +E + A RGY+R YA L+ Sbjct: 3 ELGERLRRAREAKGLSLKEAAERLALKAGVLEALEACRFEALPEPPLARGYLRRYALLLG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + E LL +QAP + P + L + Sbjct: 63 LDPEPLLALYPRQAPPPPPRKGPRRRPFPLGLFLFLLLLFGLGYGAYLLL---------- 112 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 E++ ++P T ++ Sbjct: 113 -----------RPRPVQVVEVAPPPPSKPPERYPLRVVSEPPGARVYLDGFYLGQTPLES 161 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 P V V + P +A V A T PLP + Sbjct: 162 PPVEGGK-RVLRLELPGYEPLEAEVLLKA-----PLTLTYRLKPLPQPPPASPPVPVEKG 215 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 LV+ WL V K+L+ G+ L+ P +++ G P AV++ +G+ Sbjct: 216 KLVLKLEGRSWLRVRQGD-KRLYEGIPEVGAELSF--DLPVEVRAGNPGAVRVILEGQ-- 270 Query: 314 DLSRFIRTNQVARLTLN 330 DL + + Sbjct: 271 DLGPMGEPGKPVTKSFP 287 >UniRef50_C3X7I5 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X7I5_OXAFO Length = 329 Score = 146 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 114/329 (34%), Gaps = 26/329 (7%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 N AT + EA GA L R G+S++ +A RL + V VR +E D A Sbjct: 27 NVAATTETTEAQKPGAILAARRVAAGISEEQIASRLKMSVRQVRSLEADDYEALHGMATA 86 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RG++R+YAR++ I E L+ ++ A+ + + Sbjct: 87 RGFVRAYARILQIDPEPLVASFAEKKKASASASVQQGKPVEPFVKNREP----------- 135 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 ++ ++ +I + L S ++ + Sbjct: 136 -----------FRKKRGNSGKIAILLIIVVGVLVVASNMNFFSFMDKFKKESAEKATPAV 184 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 A T+T PA +N + AN A TP A Sbjct: 185 APAPPVVPATETKETVPPAADQATPENKPADQAAANTAGQTNQANAPVQTP---ATQSAP 241 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A P + LV+NF WL++ G + + + L P + +G Sbjct: 242 VAATQAPAEKGSLLVINFREKSWLQIQKKDGAVIAEYIGKPGEKRQLEVTEPVTVIVGFA 301 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V ++++G PVDL TN VA++TL Sbjct: 302 PGVNMEFKGAPVDLVSNT-TNSVAKVTLK 329 >UniRef50_B0K6K4 Uncharacterized protein-like protein n=8 Tax=Thermoanaerobacter RepID=B0K6K4_THEPX Length = 266 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 85/303 (28%), Gaps = 51/303 (16%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G L++ R ++GL+ + + E +++ ++ IE+ A + +G+++SYA Sbjct: 1 MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEA 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + EL+ E + + P + K+ ++ Sbjct: 61 LGLDGNELVKKYEYLFQEKEEEAIPNIEITSYKKERRDFS----------------QFFL 104 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + I + L + +P + + ++ + Sbjct: 105 TLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESNVSQL 164 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + V P + + Sbjct: 165 TVKTSIEKVAETSKKIEYKVVPFGESYKVEISVP-------------------------- 198 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 CW V G ++ G+ KD + + + +G P AV+I G+ Sbjct: 199 --------GEKCWFSVK-VDGNVVYEGLMTKDMSKIFDVKDSITILMGYPPAVKITVDGE 249 Query: 312 PVD 314 + Sbjct: 250 ELP 252 >UniRef50_Q1WT11 Transcriptional regulator n=3 Tax=Lactobacillus RepID=Q1WT11_LACS1 Length = 308 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 99/327 (30%), Gaps = 27/327 (8%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G L+NAR + + + + ++ + IEE+ A ++R +IR YA Sbjct: 1 MTDIGKTLQNARNEKHYTLDDLQQITKIQKRYLIAIEENNFDALPGDFYVRAFIRQYADT 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 V I ++LL L++QA + + + R + Sbjct: 61 VGIKADKLLSELDEQAGKKKVEETEEEPTEAKTRTEAVRR-------------------- 100 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 Q Q + + + A+ T + + Sbjct: 101 QQQSSTPSQVSQSFDKFMHYLPTIIIVGVVVIIIGSIYFVVAGNKKEANQAASSTNVSIS 160 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 + + + + V S S ++++ + ++ + + + Sbjct: 161 SDVSSSKKSSKKESSSEEVSSSSSKKESSSSSESSKSSKGQKITNTAVSGSRFTYSLTSP 220 Query: 252 PNALVMNFT---ADCWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAVQ 305 + FT W ++ G + G + + +T G + + +G Sbjct: 221 AKKNKIKFTSKGGSAWSSIS-VNGTANWQGTLQNGASHTVTLPEGTTSFNISLGNSNVTN 279 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLNAE 332 I GK D + T V ++T+N Sbjct: 280 ITINGKKFDFLKENSTLTVRQITVNVA 306 >UniRef50_B1XXL4 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXL4_LEPCP Length = 299 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 113/328 (34%), Gaps = 37/328 (11%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + + + GA LR ARE GL A L + V ++ +E D+ F+R Sbjct: 9 SATPSAEGARTSAGALLRAAREARGLELDQFALLLKVPVPKLQALEADRLDQLPGLAFVR 68 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G + AR + I + +L A +A + + L ++ ++ +W Sbjct: 69 GLATAIARQLEIDPQPILAA--LPAAAQAPQALENVTRGLATPYREPGSRMLPGSW---- 122 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 E A L + P + +P + Sbjct: 123 ------------------PEWLRPGVIVPALLLLLALLFWLAPPMRALMREPVAAAASAV 164 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 A+ T V + + T +A+ + P ++ Sbjct: 165 QATVAASQAVTNEV------------RSADGADNGGAVSTTLESSASAVVETVHSAPPEE 212 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 + A ++V+ +AD W+E D G L S M + L G P +LKIG Sbjct: 213 PASSQNAAAAGSVVLRTSADSWIEARDGAGALLMSRMLPAGEVVGLDGSLPIRLKIGNAD 272 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 ++ ++G+P+DL+ R N VARL L Sbjct: 273 GTRLHFRGQPIDLNPHTRDN-VARLELK 299 >UniRef50_Q12AB7 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q12AB7_POLSJ Length = 350 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 114/331 (34%), Gaps = 4/331 (1%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + + T G LR+ARE GL A+A L + V + +E+D+ + F+R Sbjct: 21 SHSQAMPAPQCTAGDLLRDAREAAGLHIAALAASLKVPVKKLEALEQDRFDLLPDAVFVR 80 Query: 63 GYIRSYARLVHIPEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 S R + I ++L + + AP A + A + + R + + Sbjct: 81 ALASSVCRTLKIDPTQVLERMPQSPAPRLAQRSASINAPFSSPADGPRASPWKHASRPAV 140 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 V+ L E + + + + + + L + A+ ++ Sbjct: 141 LAVLALLLGALVLIFLPGVAEEPVTVKREAEDGLAVAATEKPQSLPATMVMAGASLASGA 200 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSP--SQANVDTAATPAPTAATTPDGAAPLP 239 A + A N + + P + +P Q + + AP A +P Sbjct: 201 APEVSAAINVASASAAEGLAPAAPPGDVAGAPVTPQVAMQSTLPVAPVATAVATLTSPGA 260 Query: 240 TDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIG 299 A + + W+EVTDA G + +G P +G Sbjct: 261 ALAASAPVTAVPGGIVTFRAKQESWVEVTDAKGAVVLRRTLAPGEVAGASGALPLAAVVG 320 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A Q+Q +G+ DL+ R N VAR + Sbjct: 321 RADATQVQVRGRAFDLTAVARDN-VARFEVK 350 >UniRef50_B5VZE7 Putative uncharacterized protein n=3 Tax=Arthrospira RepID=B5VZE7_SPIMA Length = 308 Score = 145 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 97/329 (29%), Gaps = 57/329 (17%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 G +LR+AR + S VA ++ ++ IEE + + +G IR Sbjct: 27 DQAQRLSDIGQQLRDARMKNSFSLGMVAAYTRIRTHLLQAIEEGEIDNLPEPIYTQGLIR 86 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 YA + + EEL P K L + + +T+T L++ V Sbjct: 87 QYADALGLNGEELANFF---LPESGEKTLARSLKLLSLPQLRPTHLYLTYTLLIICAVNA 143 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 LS + + A T T AS DT Sbjct: 144 LSYLV-------------------------------------PQSGELAVTQTESASGDT 166 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 T P T P SP Q+ + + ++ A + A Sbjct: 167 VVTPQPNPVTTTP------------SPPQSQLVSQSSTTVVVAESSAPTPAPAPTPAPAP 214 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 P+ + + + W+ + + GK F G+ T + + G V + Sbjct: 215 QPIIQDVEVGIVVKDESWVLI-EIDGKTEFQGILPGGTQKTWTAKTEVVVVAGNAGGVLV 273 Query: 307 QY-QGKPVDLSRFIRTNQVARLTLNAEQS 334 + G+ R V A S Sbjct: 274 KVNNGEA---RRLGEPGMVQEAVFKAGNS 299 >UniRef50_C6D2C8 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2C8_PAESJ Length = 310 Score = 145 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 93/325 (28%), Gaps = 52/325 (16%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 GA LR ARE+ GL+ V E ++ + IE + +LR ++++Y V Sbjct: 3 DLGALLRKAREERGLTLDDVQEITKIRKRYLEAIESGDHSVLPGTFYLRAFVKNYCDAVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + EE+L + + P + +R + +G + W Sbjct: 63 LDSEEVLRLYQHEIPASVTDQIVEAVPARQPKRVRTRSSER-------ISKLGFNIMMW- 114 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + N + + ++ + TD A Sbjct: 115 --------SFLILIVVVVWVYFVNQKADKPNEIDNTNITDQA------------------ 148 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 +PAP ++ S + T + TT ++ + P + Sbjct: 149 ----SPAPPSQSPNSSNGSGTTTPTATPTPTPSQSPTTLTFSSKVGKVDHYDVAPAGVVH 204 Query: 254 ALVMNFT-ADCWLEVT--DATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 + + + W EV ++GK + S P + +G I G Sbjct: 205 KVEIKISGGPSWTEVRSGSSSGKAIISETAPDGSAFTYDLDQPLYINVGRADLSSITVDG 264 Query: 311 -----------KPVDLSRFIRTNQV 324 K + L+ Sbjct: 265 VQINDGDRAGSKKIQLNPVEGAGGT 289 >UniRef50_Q04BK0 XRE-like DNA-binding protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04BK0_LACDB Length = 395 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 88/317 (27%), Gaps = 20/317 (6%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G +LR ARE GLS + + ++ + IE + ++R +IR YA++V + Sbjct: 4 IGEQLRKAREAKGLSISDIEKATKIQSRYLEAIENNDFDKLPGDFYVRAFIRQYAQIVGL 63 Query: 75 PEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQ 134 +ELL + + + S + + Sbjct: 64 DGKELLSQYQGEVANEVTSEVSQPAASSPDQEVHEEA---------------HEEEAAPV 108 Query: 135 DRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTP 194 + + + + + E++ + + + N + Sbjct: 109 EPVENKPARISASRPAKREVAEEAPKDAKWRKLVPRLALGYGIALLLLIGGMVFANMKKT 168 Query: 195 AVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNA 254 ++ S + ++A+ + T + + T + Sbjct: 169 GSSSQKENAGSSVTITSKKSSSKKSSSASSSSKKKKTSSIKVASLSGSSYRVTGIKSRTP 228 Query: 255 LVMNFTADCWLEVTDATGKKLFSGMQRKDGNL--NLTGQAPYKLKIGAPAAVQIQYQGKP 312 LV+ + G + + + +G V + GK Sbjct: 229 LVVRSSKQSIYYYVSVDNVITNQGTLQSGEKHTETVKKGQTLIVYLGTDTGVTVTVGGKK 288 Query: 313 VDLSRFIRTNQVARLTL 329 + F N RLT+ Sbjct: 289 I---PFTPINGTTRLTI 302 >UniRef50_C2D472 Transcription regulation protein n=3 Tax=Lactobacillus RepID=C2D472_LACBR Length = 360 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 97/335 (28%), Gaps = 46/335 (13%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN E + LT G +L +AR G + + + ++ + IE++ + + Sbjct: 1 MNDE-----KDNLTIGKKLHDARVAKGYTLDDLQKNTKIQKRYLIAIEDNDFDSLPGEFY 55 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +R +++ YA V + ELL + + P + S + + Sbjct: 56 VRAFVKQYADSVGLNGNELLSQFDTKLPDTEDPEYVNRVNSDNPKTRSAQR--------- 106 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 Q + ++ + S + + V ST Sbjct: 107 -------------QVDQRNEKIRRYIPVASVSVVVLVILIAIWVAAAHST---------- 143 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 DT+ T +T V+ ++ S + + Sbjct: 144 ---RDTSKTQIETSKVSVSGNKSSKASSSSSSSAAKKNTKKKAATKKLVFKKLTESGSNV 200 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK---LK 297 + + W V+ A G L+ Q + +T + + Sbjct: 201 TYQVTGASSKPKIKIATTGSGSAWTSVS-ANGSTLWQAAQAGGKSHTVTLPSSVSTATIN 259 Query: 298 IGAPAAVQIQYQGKPVDLS--RFIRTNQVARLTLN 330 G I GK + LS +NQV +TL Sbjct: 260 TGNAPQTVIYVSGKRLKLSDPSDGSSNQVRVVTLQ 294 >UniRef50_C7RN39 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN39_9PROT Length = 292 Score = 144 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 113/306 (36%), Gaps = 49/306 (16%) Query: 27 GLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQ 86 G++ A+ L L V +E + + +T +RG++R+YARL+ + +EL+ L+ Sbjct: 34 GMTVADAAQSLKLGPRQVEALEAEDWLSLPGNTMIRGFVRNYARLLSLDPDELMRELDAA 93 Query: 87 APLRAAK--VAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEIT 144 R + V+ + +L ++ + L +++ A+++ Q ++ Sbjct: 94 HLQRTVELDVSAGTTATLPPTVRRVERRDYLAISAGLILLVLAGLAYYYVPADFWQSQMA 153 Query: 145 TMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVD 204 T + PA P + + T P T + A Sbjct: 154 TWIGS----------RSAPPAPVVPPVRAPADVVAPKGAAGESVTVLTAPNATVLSEAPG 203 Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 + A SP+ A L + F W Sbjct: 204 VRSPAGASPATAGG------------------------------------LKLGFAQPAW 227 Query: 265 LEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQV 324 EV D G+ +FSG+ ++ GQ P+ L +G V ++YQGK VDL+ I V Sbjct: 228 AEVRDGRGQIVFSGVSPAGSRRDVAGQPPFSLVLGNATQVSVEYQGKVVDLAPHI-NGDV 286 Query: 325 ARLTLN 330 ARLT+ Sbjct: 287 ARLTVE 292 >UniRef50_B1HR33 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HR33_LYSSC Length = 309 Score = 144 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 93/327 (28%), Gaps = 30/327 (9%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G RL+ AR G S + E ++ + IEE S ++R +I+ YA V Sbjct: 6 ELGTRLKEARLSKGYSLDDLQEITKIQKRYLVGIEEGNYSIMPGSFYVRAFIKQYADAVG 65 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQ---SFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + EE+L + + P S S K K +M ++ + Sbjct: 66 LNAEEILETYKNELPSTPNDQVSQSITNSPSRRKVTKGPSNKMMEAMPKIIVAL------ 119 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 Q ++ P + T + Sbjct: 120 ----------------FIVVIIVAIWVLWQSKNSPGTSEGNTTSPEIEYDTNVKPIDSAK 163 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + A D + + + D T G + T Sbjct: 164 DKKEKEEKDALKNDQKDTDSKEETPTDEDQTDQTEEIKQTISAGTVEADGETTSYTLTGT 223 Query: 251 DPNALVMNFTADCWLEVTDATGKKLF--SGMQRKDGNLNLTGQAP--YKLKIGAPAAVQI 306 D L + + ++ + + ++L + + + ++++G +I Sbjct: 224 DTLKLKIEVSGPTFVGIRNQQQQELLTDTRVYNAGEVVEFDATTQNYVRIRLGNSTQAKI 283 Query: 307 QYQGKPVDLSRFIRTNQVARLTLNAEQ 333 + + ++ + T + + N EQ Sbjct: 284 YINDELLTYAQQVVTQNIV-INFNKEQ 309 >UniRef50_Q04R20 Transcriptional regulator n=7 Tax=Leptospira RepID=Q04R20_LEPBJ Length = 372 Score = 144 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 111/362 (30%), Gaps = 39/362 (10%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 G LR ARE+ LS + VA+ + V + +E + TF G++++Y Sbjct: 2 NQKRVGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYGS 61 Query: 71 LVHIPEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 + + +L+ + A + + + K FT + +++ + Sbjct: 62 YLKLDTGQLINLYRGEKIEESQAPLEELTRPTASYYTKINMDKNKIFTIASVLIILISAY 121 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQ-SVPLNTSTTTDPATTSTPPASVDTTA 188 + ++ + + S+P N S + SV Sbjct: 122 LIIDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPENRSESFILTPDKGVSFSVSNQQ 181 Query: 189 ----------------------------------TNTQTPAVTAPAPAVDPQQNAVVSPS 214 + Q ++ P + + V + Sbjct: 182 CKLFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRIIA 241 Query: 215 QANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKK 274 QA + +A T + T P + + F + E G+ Sbjct: 242 QAVTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFI-IDGQM 300 Query: 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS 334 F G+ + + +L + +LK+G +AV++ GKP R ++ + Q+ Sbjct: 301 GFRGLVQANETKSLEAKDRLELKVGDGSAVEMIQNGKPK--ITLGRPGKLVKKIFVKTQN 358 Query: 335 PA 336 P Sbjct: 359 PY 360 >UniRef50_C6E0H1 Transcriptional regulator, XRE family n=2 Tax=Geobacter RepID=C6E0H1_GEOSM Length = 273 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 97/331 (29%), Gaps = 59/331 (17%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 +E + + G L++ RE GL + ++ + + + IEE + +++ Sbjct: 2 SEPEQNVGAEIPVGQYLKSVRESRGLKLEEASQVTKIGRNYLAAIEEGQFEKLPNVAYIK 61 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G++R YA + + +E++ E++ A A G Sbjct: 62 GFLRLYAGYLSLSGDEVVARYERELAPAAKPQAEPPQPHPG------------------- 102 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + E +A+ + + + + + PA Sbjct: 103 ---------------MENVEKAKLANHGRWMIPALLLVLVVLAALFYSDGEQPPPPPQPA 147 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 P V ++ +A A Sbjct: 148 PPAPAPAPVMAPMTAPVQMQVSSALLEPLTEPTPEGPRSAASAGKQ-------------- 193 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 + L + F D WL +T + + G+ + L++G Sbjct: 194 --------EGVVLKLRFNRDSWLSIT-IDDSISQRYDLKAGDIIEWKGKRSFSLELGDGG 244 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQ 333 AV+ ++ G+P L+ + Q A + L A Q Sbjct: 245 AVEGEFNGRP--LTALGQAGQPAHVDLKAGQ 273 >UniRef50_B4SSW5 Transcriptional regulator, XRE family n=20 Tax=Xanthomonadaceae RepID=B4SSW5_STRM5 Length = 289 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 66/334 (19%), Positives = 114/334 (34%), Gaps = 52/334 (15%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + + A G RLR ARE GL+ + V RL + + VR +EE++ A F+ Sbjct: 3 DDQTVSALETAAGCGTRLRQAREAAGLTLEDVGSRLRMPIQVVRSLEEEQWQKLGAPVFV 62 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RG +RSYARL+ + +LL + P+ + +R + G + + + Sbjct: 63 RGQLRSYARLLDVDVGQLLEQ-AQVGPVVPPTLVSHTHTPRARRIAENLGRRVLYVGITA 121 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 + + W+ R P S PA P Sbjct: 122 VLAV----PVWFATRGHFDGS------------------APPAPNTASLDALPAAVPVTP 159 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 ++ + A + A + Sbjct: 160 SAAGIEPSAPVEVAAAPASKPAATPYVASL----------------------------AP 191 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A N L M F D W+++ G + + + + + T ++ +G Sbjct: 192 VPRSAPAAAAANTLDMQFNGDSWVDIGGPDGTSVEKALIKSGESRSFTPGQVARVTLGNA 251 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSP 335 +AVQ+Q G VDL+ + R N VAR +++E S Sbjct: 252 SAVQVQQNGAIVDLTPYQRAN-VARFQVSSEGSV 284 >UniRef50_C5RCH6 Transcription regulation protein n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCH6_WEIPA Length = 316 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 92/323 (28%), Gaps = 27/323 (8%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN E G L+ AR GLS + + ++ + IE + + + Sbjct: 1 MNEERNS------AIGQELQQARLDKGLSLDDIQQSTKIQKRYLAAIESGQFDQLPGAFY 54 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 R ++R YA V + + E + A + Sbjct: 55 ERAFVRQYATAVGLDAVAFMQKYENEDTETVAPDLSAARVDADNVTRAGMHQTEETVA-- 112 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 ++ +I + + + +T S Sbjct: 113 -------------DKTRSMMPKIIIGVVIVAIIAIIWVVVSSFAGSAKQESKNQSTVSVT 159 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + V + +++ A + A + +A S ++ ++ A G + Sbjct: 160 TSQVASKKASSKKSATSTTASSESKSSSASSSSKASSKSSSEKKTAKADKVDLGQGTVSG 219 Query: 241 DQAGVTTPVADPNALVMNF---TADCWLEVTDATGKKLFSGMQRKDGNLNL---TGQAPY 294 + A + M W++V+DA G L++G + T Sbjct: 220 TTVTYNSVKAPNKTMKMQLKAENGSSWMQVSDAAGTVLWNGTVADGKTQEVDIPTTATGV 279 Query: 295 KLKIGAPAAVQIQYQGKPVDLSR 317 + IG A ++ K VDL Sbjct: 280 SVSIGNALATKVSLNNKAVDLQS 302 >UniRef50_Q1ZDU0 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZDU0_9GAMM Length = 305 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 125/334 (37%), Gaps = 40/334 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA--- 57 M+++ + L G L+NAR Q S Q V E+L + + + +IE Sbjct: 6 MSSD-----KQNLPLGQALQNARMQREFSVQDVVEKLNIHKNIIENIEFSVEKILEEKKC 60 Query: 58 -STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTF 116 +LRGY+ ++ARLV + + + + LR K + K F Sbjct: 61 SPIYLRGYLVNFARLVGLDDLDTFEEFTSLSALRKEKKVLAKPSLFTPALNKSQHTGAIF 120 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 + LV+ ++ L +W Q + +I E + ++ T P Sbjct: 121 STLVIMLLGALIVNYWQQIYDFSKFDININNSVELDEQARE--------IHNMAITIPVD 172 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 + V + A +AP + + VS AN +T Sbjct: 173 NIEDESVVPSQADEKSLVKESAPIQKTEQSLKSEVSVKVANKETPKDIVENKPLLVS--- 229 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 + + ++ADCW E+ DA K++ G+ ++ L L G+ P++L Sbjct: 230 ------------------MSLTYSADCWTEIKDAKNKRVAFGLYKRGRVLTLQGEPPFQL 271 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 K+G P+ V+IQYQ + L + + A L Sbjct: 272 KLGDPSVVEIQYQNEI--LKNNFESGKSAVFVLP 303 >UniRef50_B3DYX2 Predicted transcriptional regulator contains Xre-like HTH domain n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DYX2_METI4 Length = 369 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 122/362 (33%), Gaps = 40/362 (11%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M +Q T G RL+ ARE GLS Q V++ + + +E+D+ AST Sbjct: 1 MRRRKIMEQGMKQTIGQRLQAAREAQGLSLQTVSKITKILPEQLAALEQDQYEKIPASTQ 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVA----------PMQSFSLGKRRKKRD 110 +RG++R YAR + + E+ LL L+ R ++ Sbjct: 61 VRGFVRIYARTLGMDEKPLLDELDNIFGFREEDNHLLITLPVKYVDPTVEKEPFFTPQKI 120 Query: 111 GWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITT-------------------MADQSS 151 + F VL IGL + + ++ + +Q + Sbjct: 121 AFFFAFLLFVLMCSIGLYRIYQVTSFRHGPGKMASHEEQIRKSPELKPSILEPLTKEQPT 180 Query: 152 AELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQN--- 208 N Q +++P+ +T P P +++ + +P ++ +N Sbjct: 181 EGSQGNLFQVENIPVKRATPLHPIKPEEKPQEQSLSSSPSSSPPPSSANAEASNTENVKI 240 Query: 209 ----AVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCW 264 V N++ + +A + LV+ D W Sbjct: 241 MRALPVTPEPVPNLEDHPRTKDGEIESDADSADENNTDEPAVSFAEKNYKLVVQARKDSW 300 Query: 265 L---EVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 + + K++FSG+ + G ++++ + V+ GK + ++ + Sbjct: 301 IFIQVIEGGKAKQVFSGVLHGGEHKEFIG-PRFQIRASNVSQVEFILDGKSISVASAGES 359 Query: 322 NQ 323 Q Sbjct: 360 PQ 361 >UniRef50_Q9KAA2 BH2388 protein n=1 Tax=Bacillus halodurans RepID=Q9KAA2_BACHD Length = 283 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 79/308 (25%), Gaps = 36/308 (11%) Query: 19 LRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEE 78 +R RE+ LS + ++ + IEE + + R +I++YA V + E+ Sbjct: 1 MREIREEKQLSLDDLQRTTKIQKRYLLAIEEGRYDVLPGVFYARAFIKTYAEAVGLDPEQ 60 Query: 79 LLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKA 138 L + P + + S +R L Sbjct: 61 LFDEFSNELPNPQKDLPDRPARSERMKRTAPPVPKKKSKLFSLL-------------PMV 107 Query: 139 QQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTA 198 + + +++ Q P V Sbjct: 108 AAVAAILLLAIGIWYFAQGNDRAQEPPPEEHDVE---------------------AEVGE 146 Query: 199 PAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMN 258 + ++ + A A + +++ D + + Sbjct: 147 DPGVEEVEEEEEQPEDNGSDAAEDEQAEEADESELVHIESVGNRSYYELSGTDRFDVEIT 206 Query: 259 FTADCWLEVTDATGKKLFSGMQRKDG--NLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 F ++ + + G F+ + + +G+ + GA V + + + Sbjct: 207 FDGTSYVAIENGLGNTFFAANAGEGDEQTYDFSGEEEIEFNFGASTFVNLTINDEAFEFP 266 Query: 317 RFIRTNQV 324 +V Sbjct: 267 LDTPHQRV 274 >UniRef50_Q5WFW7 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFW7_BACSK Length = 296 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 96/323 (29%), Gaps = 32/323 (9%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G L+ RE+ ++ + ++ + IEE + R ++++YA + Sbjct: 3 ELGNYLKETREEKQITLDDLQRTTKIQKRYLAAIEEGNFDTLPGIFYARAFVKTYAEAIG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + +E+L + + P + + S S + R Sbjct: 63 LDADEVLETYKNELPNPQTEAVDLPSRSERVKTSART----------------------- 99 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + + ++A L + V + + D T T Sbjct: 100 APSRPGKGRGKSLASILVPILLIAAVVLVVVLIWNISGRDSGGEVQNEQEAGQTDTYDPP 159 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 ++ + D P + + T V Sbjct: 160 ENAGDEEGEGAADEDEAADEESGSEDEQTDKEPQLSLEETSG----NVSTYILTNVEAIE 215 Query: 254 ALVMNFTADCWLEVTDATGKKLFS--GMQRKDGNLNLTGQAPYKLKIGAPAAVQ-IQYQG 310 L + +++V D G+ + G + D +++G +L IG V+ ++ G Sbjct: 216 TLKIEMGEGSYVQVRDRDGQAMDENGGDYKDDFEPDVSGLDALELNIGNGYGVERVEVNG 275 Query: 311 KPVDLSRFIRTNQVARLTLNAEQ 333 V+L +Q +T+ ++ Sbjct: 276 LEVEL--LETDHQYVTITVEEQE 296 >UniRef50_A8YN50 Genome sequencing data, contig C328 n=2 Tax=Microcystis aeruginosa RepID=A8YN50_MICAE Length = 283 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 92/337 (27%), Gaps = 54/337 (16%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + + G LR RE+ LS +A +++ + +E + Sbjct: 1 MSQLSPLQAEQIKEIGTYLRQKREESCLSIDDIAAVTMIRLPMLEALETGNWEKLPELIY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 ++G+I+ Y + I + L L A A + Sbjct: 61 VKGFIKRYGDALKIDGKALADRLSPSAEQLAQE--------------------------- 93 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 T+ + + + + P + T Sbjct: 94 -----------------------VTIPKTLPTKATPIPKAEPAAPKAERVKPENPAPETS 130 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 P +T + P +P+P + P L Sbjct: 131 PQPAKSTFFGIYLWLGLLAGIFCGIGYLFLRPPFSNPPAVTPSPSPVGSLAPVVPPALVA 190 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + P +A + W+ V A GKK+ G + T Q ++ G Sbjct: 191 SPSLSPQPKVPLSA-EVTIEQAAWVRVI-ADGKKVHEGNLQPGTKRTWTAQKSLNIRSGN 248 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 AV+I P L + +Q+ +TL A Q Sbjct: 249 AGAVKISLNENPAQL--MGKADQIGEITLTAPPLSDQ 283 >UniRef50_A0YN87 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YN87_9CYAN Length = 304 Score = 142 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 90/337 (26%), Gaps = 59/337 (17%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + + + G +LR RE LS VA ++ ++ +EE + Sbjct: 20 SVTSIEQAQRLVEVGLQLRQTREHHSLSLDMVAAYTMIRRHLLQALEEGIVENLPEPVYT 79 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 +G IR YA + + EEL P S+ L + + Sbjct: 80 QGLIRRYANALGLNGEELANFF---LPEPIILSLESSSWLLPLPQLRPTH---------- 126 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 + L +S Q Q +P + PAT++T Sbjct: 127 --------------LYLTYILLILGTMNGLVYLIQSSPQVQILP-ESRIAEVPATSTTQS 171 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 SV + + A + N SP+ Sbjct: 172 VSVSANNSTPGQDQLAVQATSTSINNNKTNSPTSPVSP---------------------- 209 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 P+ + + + W+ + + GK F G+ + + G Sbjct: 210 ----PAPINQTVEVGITVKDESWVLI-EVDGKTEFQGILAGGSKRSWKANNELVVVAGNA 264 Query: 302 AAVQIQY-QGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 V + GK R V + + Q Q Sbjct: 265 GGVMVTVNNGKS---QRLGEPGMVEEVIFKSNQPQPQ 298 >UniRef50_B8G090 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8G090_DESHD Length = 267 Score = 142 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 92/323 (28%), Gaps = 66/323 (20%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G LRNAR G S E +++ + +EE+ T+ +G++R+YA+ + I Sbjct: 5 GQILRNARVDKGWSLTQAEEVTKIRIRYLEALEEEAYHILPGDTYTKGFLRTYAKHLGIN 64 Query: 76 EEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQD 135 EE+L + + P+ + ++R W+ Sbjct: 65 PEEVLEHYKALG---QQQEKPLSAEPAPPLPRRRPQWIKPVL------------------ 103 Query: 136 RKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPA 195 + V S + P TT P V T Q Sbjct: 104 -----------------VAVTGVVALVVVIGIASLSKHPGTTIAPEDIVTPLPTTPQEEV 146 Query: 196 VTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNAL 255 V P P S ++ V + Sbjct: 147 VQQPENTPPPDDTPPAQTSP------------------------SNPQNVIAQENEGLVA 182 Query: 256 VMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYK-LKIGAPAAVQIQYQGKPVD 314 + F+ CW+ V + G+ F G + L + + + +G + + GK Sbjct: 183 QLVFSQPCWIRV-NVDGQFAFEGTFTQGATKELKAKDQIELVTVGNAGGLTVTLNGKT-- 239 Query: 315 LSRFIRTNQVARLTLNAEQSPAQ 337 QV + + S Q Sbjct: 240 WPSLGAQGQVVNNIILKKDSANQ 262 >UniRef50_B9MFX5 Putative uncharacterized protein n=2 Tax=Comamonadaceae RepID=B9MFX5_DIAST Length = 322 Score = 141 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 104/328 (31%), Gaps = 21/328 (6%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + + +T G LR RE G+ +A L + + + +E D+ A + F+R Sbjct: 16 QDHGTEPAGGVTAGQLLRQLRESAGVHVDVLAGTLKVPANKLHALEADQYDAFPDAVFMR 75 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 R + +L L + P++ + + + Sbjct: 76 ALASGVCRTLKADAAPVLALLPQSGPVQLVVDKGLNASFKDPGHR--------------- 120 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 I + R +A + V + T P Sbjct: 121 -FIKGGTLERPRSRMMGVTVAALLAAAVAIAFLPKGNDSLPVASSPEAVTPPQRALEATQ 179 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 TA + V + ++ S A +A A A + G D Sbjct: 180 LDPVTAAVPSESVASGGQATVRAEPSSAAVASAALAASAPAAAVEPAPSQGGTNEAGVDA 239 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 G LV+ + W++V +A G + + +++ G P+ + IG Sbjct: 240 KGTEA----SGVLVIRARGESWIQVRNAAGGVVLQKILAAGESVSAAGSPPWSVVIGKAD 295 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLN 330 A ++ +G+P+DL+ R N VAR + Sbjct: 296 ATEVVVRGQPMDLNAIAREN-VARFEVK 322 >UniRef50_D0XIR9 Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XIR9_9CAUL Length = 377 Score = 140 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 98/309 (31%), Gaps = 25/309 (8%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 + +A T G+ LR ARE G S +A + +R +EED A + F Sbjct: 24 KDPVPSITDAATLGSGLRKARELSGRSMAELAADTRVHERYLRALEEDNVSALPSRVFAI 83 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 GY+R+YA + + E+ + +++ P + + + ++ + V+ Sbjct: 84 GYVRAYAGALGLDEQLAVERYKRETPDASVALQAPVGVAFEDVKRYSPRIIG----GVVL 139 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + + + G +Q Q + + S GQ + + P +TP Sbjct: 140 LAVAVIGWNVFQRVSLMQAPQPSDIAEVPESWSLGEVPGQDIVRVGAPMAAPPDQTTPAL 199 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + T AV P QA + + Sbjct: 200 YITPGLEAELTGIDPTDTAAVAAAAARNAPPVQAAFN---------------------PR 238 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 + A + +V+ L V A G+ LF+ + + PA Sbjct: 239 GAIYGASATASQVVLQAKKAGALVVRMADGRVLFARQLAAGEAWRAPADVSAIIDVSDPA 298 Query: 303 AVQIQYQGK 311 A + G+ Sbjct: 299 AFDVYLNGE 307 >UniRef50_A9AVS8 Transcriptional regulator, XRE family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVS8_HERA2 Length = 319 Score = 140 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 91/325 (28%), Gaps = 62/325 (19%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 T + G R R ARE G+S + + + +E + + R Sbjct: 50 TRQSMTNAGQNRLGLRFREAREARGISLAQASSETRIIQRYLAALENGEYHHLPGDVYAR 109 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 G+IR+YA+ +++P +EL+ + + + Sbjct: 110 GFIRNYAQYLNLPADELIDLYRIERGASTPIRIVPAAVPPRRNT---------------- 153 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 I L W I + + + NS T P +TP A Sbjct: 154 --IFLPSLWTVILVVLALVVIGYLTLNALGLTTINSTSVSGGATTTLAIATPTLLATPTA 211 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 + +P P V Sbjct: 212 QPTNPDGSVPSPINPLATPTV--------------------------------------- 232 Query: 243 AGVTTPVADPNALVMNF-TADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 +T P +V+ WL+V G+ G+Q + Q ++K G Sbjct: 233 -TITPTQDVPVQVVLRIDGGSSWLQVL-VDGQNTIEGIQNNGWTQTFSAQQTIQVKAGNA 290 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVAR 326 A V++ + GKP R NQV Sbjct: 291 AVVEVIHNGKP--PVRMGAPNQVVT 313 >UniRef50_A1TM26 Putative uncharacterized protein n=3 Tax=Acidovorax RepID=A1TM26_ACIAC Length = 318 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 115/319 (36%), Gaps = 35/319 (10%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 LR AREQ G+ A+A L + V + +E + F+R + S R + I Sbjct: 29 MLRQAREQAGMHVAALAVSLKVPVHKLEALEVGDLGVFPDAVFVRALVSSICRTLKIDAA 88 Query: 78 ELLPGLEK-QAPLRAAKVAPMQSFSLGKRRKK-----RDGWLMTFTWLVLFVVIGLSGAW 131 +L L + QAP ++ SF G + + F L V Sbjct: 89 PVLALLPQNQAPRLSSHEGINASFKPGSAKLASSSAAPGSRKVAFAVAFLLVAAVALVFV 148 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 + Q + + D+ S + G T ++P Sbjct: 149 PREWFDRLQGAPSAVTDEPSGVQEAARAGGAPPAPVAGTVSEP----------------- 191 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 V +Q +V + A+ A A++ P A + + + A Sbjct: 192 -----------VLLRQETLVGGAPLPPAPVASSAVAASSAPAAAPVVAAAASAPASAEAA 240 Query: 252 PNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGK 311 +ALV+ D W++V ATG + + R + + G P+ + +G A ++ +G+ Sbjct: 241 QSALVIRARGDSWVQVRAATGATVLQKLVRAGETVAVPGSPPWSVVVGKADATEVLVRGQ 300 Query: 312 PVDLSRFIRTNQVARLTLN 330 P+DL+ R N VAR + Sbjct: 301 PMDLAPVAREN-VARFEVK 318 >UniRef50_Q28R11 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28R11_JANSC Length = 491 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 109/363 (30%), Gaps = 40/363 (11%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + G +R R LG S V L ++ + + IE A + F+ GY+RSYAR + Sbjct: 44 VPLGDLMRGERATLGKSLLDVERELRIRATYIAAIENADVGAFQSQGFIAGYVRSYARYL 103 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGW-------------------- 112 I E + R + S KR R Sbjct: 104 GIDPEWTFRRFCDETGFRGIHGSATHQASDVKRSVSRAPRRVDPNEVMVSTRISYAPTRH 163 Query: 113 --------LMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSV 164 + V+ V+ G W Q D++ A + + V Sbjct: 164 SLMSRVEPGALGSIAVVLVLAMGIGYGAWAILHDIQRLQIAPIDEAPAVPLAQLDPLVGV 223 Query: 165 PLNTSTTTDPA------TTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV 218 ++ +T T +T + A+ AP ++P + Sbjct: 224 TSGSNGSTGTNGFDGDHTFDIAMPGPETGNALYRPQALEAPVLTPRDGALGTLNPDEVGT 283 Query: 219 DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSG 278 + T TAA A P V + +++ T W+ VT A G ++ Sbjct: 284 LSGVTQTATAAPAATAPATPPVADGSVQVTAGRADEVMIFATRPTWVRVTSADGSTIYEA 343 Query: 279 MQRKDGNLNLTGQAPY-KLKIGAPAAVQIQYQGKPVDLSRFIRTNQVAR---LTLNAEQS 334 + + +L+ G ++ G V L + R LT +A + Sbjct: 344 TLNAGDSYVVPDTDGAPRLRSGNAGSLYFAVNG--VALGPAGPGATIVRDVELTADAVTA 401 Query: 335 PAQ 337 Q Sbjct: 402 TYQ 404 >UniRef50_Q04E76 Xre-like DNA-binding protein n=2 Tax=Oenococcus oeni RepID=Q04E76_OENOB Length = 324 Score = 138 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 97/316 (30%), Gaps = 30/316 (9%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 + G L++ARE GL+ + ++ ++V ++ IE + +++ +IR Y Sbjct: 2 DTDYRAIGKHLQDAREHHGLTLEDISSSTKIQVRYLQAIETGQVDKLPGPFYVKAFIRQY 61 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 A V + +L E + + Q S + TW Sbjct: 62 ANTVGLDPNTILDTSEDRDKDLDSDFESDQENSNNPDSLFFNEEDSKGTW---------- 111 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT-- 186 + + ++ T S + S++ +N S + P + Sbjct: 112 ------NDRQTDKDKTGNEKISKNSIRVGSDRIPRAGMNLSLSMPQRLMKKIPLLIVALL 165 Query: 187 --------TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 P T S +++ ++++ + ++ Sbjct: 166 FILAFGAWIVIGKVHPNSTTSTKIDSSSAQMQSSKQKSSSSSSSSSSSSSNVEALSKPQF 225 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYK 295 ++ A +T + + + ++ W + F +T GQ Sbjct: 226 SSNTATMTFYDDKAHTIQVQASSASW-TIFTVDSVTQFETTIPAGSYKEVTLSKGQKEAT 284 Query: 296 LKIGAPAAVQIQYQGK 311 + +G P +I + GK Sbjct: 285 IHVGNPYNTEILFDGK 300 >UniRef50_A1BIX7 Helix-turn-helix domain protein n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BIX7_CHLPD Length = 298 Score = 138 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 96/321 (29%), Gaps = 40/321 (12%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ E+++ + L G L+ AR Q LS + V+ + S IE + Sbjct: 1 MHEESSYRSSLDLIAGD-LKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLP-KIY 58 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQS------FSLGKRRKKRDGWLM 114 + ++SYAR + + ++ LL K+ + + +S ++K+ Sbjct: 59 VFATLKSYARELGVGDDALLEQCRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFS 118 Query: 115 TFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP 174 F+WL V S + Q + +S + Sbjct: 119 FFSWLGGLVASRGIAVLMVALAILLALFFIRKPSSSPPPMIEPVVQTPVMLPQSSDSAV- 177 Query: 175 ATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDG 234 + +S + A +P Sbjct: 178 ------------------------------VDTLSGLSDIPSEPKEDVPSETPVAPSPAK 207 Query: 235 AAPLPTDQAGVTTPVADPNALVMNFTADCWLEVT-DATGKKLFSGMQRKDGNLNLTGQAP 293 A + + + A +V + W++V D + K G L+ G+ Sbjct: 208 ALSTDSLSSAHASAPARQRLVVRIISDTSWVKVIADDSAKVYPGGRFPSGTVLHYEGKKK 267 Query: 294 YKLKIGAPAAVQIQYQGKPVD 314 + IG P V++ GK + Sbjct: 268 LWVSIGRPVNVELTLNGKKIP 288 >UniRef50_Q1IKD9 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKD9_ACIBL Length = 288 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 98/317 (30%), Gaps = 39/317 (12%) Query: 26 LGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEK 85 G+S +A + +++ +E++ F +G++RSYA+ + + E+E + Sbjct: 2 RGISLDEIAVATKIGTRSLKALEDENFSILPGGIFNKGFVRSYAKFLGLNEDEAVADYTA 61 Query: 86 QAPLRAAKVAPMQSFS--------LGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 + V + S S ++ ++ L+L V+ ++ + Sbjct: 62 AVKEQPVSVKTIASQSAMAKANRLAAQQARESSHKAGIVRALILLVLSAGIAFGGYKVYR 121 Query: 138 AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVT 197 A + M T T +V Sbjct: 122 AGYFKAFKMPSLHR------------------------------QLKQQAQAPTPTTSVP 151 Query: 198 APAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVM 257 + + P+ AT +P + T + + D + + + + Sbjct: 152 STTSSATSAPPPASQPTVVAPADNATSSPASTTVSKPESRIAEDTTTIRGAIPLEFTVSI 211 Query: 258 NFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSR 317 T W+ +T G++ + ++ +G P +I GKPV +S Sbjct: 212 KATGWSWMSIT-MDGRRPLQKTFAPHEQKEFKAKNRVRIVMGNPNGTEISLNGKPVAISG 270 Query: 318 FIRTNQVARLTLNAEQS 334 + + + + QS Sbjct: 271 DLTRPRTVVVNASGLQS 287 >UniRef50_A3EWJ9 Putative uncharacterized protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EWJ9_9BACT Length = 340 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 109/345 (31%), Gaps = 30/345 (8%) Query: 1 MNTE----ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADL 56 M E A +++ A T G L R++ GLS + + + + + I++ + A Sbjct: 10 MEEEDGLKAEIEKSGARTIGEFLSYERQRKGLSLEEIDQISRIGPRWLEAIDKGEWSAYP 69 Query: 57 ASTFLRGYIRSYARLVHIPEEELLPGLEKQA----PLRAAKVAPMQSFSLGKRRKKRDGW 112 + + +G+IR YA ++ ++ E++ P + P+++ + + D Sbjct: 70 SLIYAKGHIRGYASVLGFDGSRIIAEFEEELKKAFPDETFHIHPVRNINQIYQPTSGDHR 129 Query: 113 LMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTT 172 +L ++ + +++ + + Sbjct: 130 GGGRYKFLLLGILITFFLILVISKAIHRKD------------------HPRLSVVPQAVP 171 Query: 173 DPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTP 232 P T + P + + + ++ P+ P ++ T+ + Sbjct: 172 TPPTQTFPSLAQQPVSPSPGGAQQSSSTPSPPPAPTGTSGGGKSLSSTSGGGQAKVGPSG 231 Query: 233 DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQA 292 A ++ + P+ L + D W+ V G K + G+ Sbjct: 232 SSAQSKIVARSEKPSQPLAPSVLKVQAVRDTWVGVR-IDGGKEMEIPLDRGQWRLFHGKT 290 Query: 293 PYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ 337 +++ ++ + L + +Q R L + Q Sbjct: 291 -FRISTDDGGSLLLFLN--KGPLGKAGEDDQPVREKLISAMPVKQ 332 >UniRef50_C2HEM1 Possible transcription regulation protein n=16 Tax=Enterococcus RepID=C2HEM1_ENTFC Length = 311 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 90/336 (26%), Gaps = 46/336 (13%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 ++ T G +LR AR +S + + ++ + I+ D ++R +I Sbjct: 14 EDERVAFETIGEKLRQARLNKKISLDELQQITKIQKRYLEAIDNDDFDQLPGKFYVRAFI 73 Query: 66 RSYARLVHIPEEELLPGLEKQAP----LRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 R YA V + L+ + ++ + S S ++ +T L + Sbjct: 74 RQYAEAVGEDGDHLVDVFDGKSKLTGSVPERPQPETVSTSRKAIHQEESHPSRFWTSLPV 133 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 ++ ++ A ++ S E Sbjct: 134 ILLGLVALAIVVVVGYMTWQDRQADPIIGDTASSLKVE---------------------- 171 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 + + + + V++ + + Sbjct: 172 ----------------GSVEESSSSEQSTQTQESSTVESTTESSEEKKMAIAAGEDSGSA 215 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL---TGQAPYKLKI 298 A T P L W+ V ++ G + + A + I Sbjct: 216 IAVNITDATKPVTLEFTAVNRVWIGVL-VDNAYVYQGTLAANETQSTVLPETAANATITI 274 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS 334 GA + I+ G+ V ++ + L + + Sbjct: 275 GAASNATIKANGESVPVNPGENNQSPKNVNLTLQYA 310 >UniRef50_Q03R26 Xre-like DNA-binding protein n=4 Tax=Lactobacillus RepID=Q03R26_LACBA Length = 301 Score = 137 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 92/311 (29%), Gaps = 42/311 (13%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 N +T G LR+AR G + + + ++ + IE+ ++R +I+ Y Sbjct: 3 DNSKVTLGKTLRDARIAKGFTLDDLQQATKIQKRYLIAIEDQNFDELPGDFYVRAFIKQY 62 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 A +V + ELL + P + + + + + Sbjct: 63 ADMVDLDGAELLKQFDSTLPSTQTQEYVDKVNESNPETRSQQRKV--------------- 107 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 + T+ + G V + + + + + Sbjct: 108 -------DDRYVQLRRTIPVIGIVIVVLVVLVGIWVAAAHNGNSGTKDNVDSSSVSVSGS 160 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 + + + + + + + + ++ T T + P Sbjct: 161 STKTSSSSSQSSSSKSSSKKKAAKTATFKKLSSTTSGSTWELKNASSKP----------- 209 Query: 249 VADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLT---GQAPYKLKIGAPAAVQ 305 + ++ T+ W+ VT +G + G + +LT K G A + Sbjct: 210 -----KVSLSATSSAWMSVT-ISGATTWQGTLSTSTSHSLTIPSSATSVTFKFGNAPATK 263 Query: 306 IQYQGKPVDLS 316 ++ GK + + Sbjct: 264 VKIDGKSFNFN 274 >UniRef50_Q8EQS0 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQS0_OCEIH Length = 305 Score = 136 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 101/321 (31%), Gaps = 38/321 (11%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 + GA+L+ AR G+S ++ E ++ + IEE + R +I+ YA V Sbjct: 1 MDVGAKLKEARLSSGISLDSLQETTKIQKRYLVAIEEGNLHILPGKFYARAFIKEYATAV 60 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKR------RKKRDGWLMTFTWLVLFVVIG 126 + ELL ++ P + +R + R ++ +VL V+ Sbjct: 61 GLDPNELLEEHREELPSTEEENVQYTRIQRTRRENNSNDKGSRISSVIPSIIVVLLVIGI 120 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + AW + + + + +++ + T Sbjct: 121 IIVAWLFIR--------------------------ANSSSDATDSSEEPQENNVIIEEGT 154 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 + T + + + S+ N + + + + Sbjct: 155 NDSENNTDESAGDEEENNEENDGTSEGSEDNESEEDSSEDLSVEVIEEGTGSSPNSVIGV 214 Query: 247 TPVADPNALVMNFTAD---CWLEVTDATGKKLFSGMQRKD---GNLNLTGQAPYKLKIGA 300 + D + ++ TAD WL VT G+ L++ + + + T +G Sbjct: 215 SNYGDELTVSVDVTADDMESWLGVTSGNGESLYNSIFNAEAAPQEWDATDYESISFNVGN 274 Query: 301 PAAVQIQYQGKPVDLSRFIRT 321 AV I G ++ T Sbjct: 275 TPAVVISINGTEIEYPVDTST 295 >UniRef50_C0X144 Transcription regulation protein n=22 Tax=Enterococcus faecalis RepID=C0X144_ENTFA Length = 288 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 102/315 (32%), Gaps = 52/315 (16%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 ++ G L+ AR Q +S + + ++ + IE++ + + ++R +IR YA Sbjct: 2 ASVNIGETLKEARLQKNISIDELQQMTKIQKRYLEIIEQNDFESLPGTFYVRAFIRQYAS 61 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK-----KRDGWLMTFTWLVLFVVI 125 V + +L+ + + P + P+ G R++ K+ WL+ + F +I Sbjct: 62 AVGLDGNQLVDIYDGKEPAIVEEPKPVYEELEGSRKQLHDEEKQSSWLLRNLPAIAFSLI 121 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 GL+ + +E P +++ P +S P S Sbjct: 122 GLAI---------------AVVVLYIMWQDQKAEPIIQTPATSASVEKPKESSQAPESST 166 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 ++T + + AV +A + D + T T Sbjct: 167 QSSTPPSSSSEPEKKTAVAVVSDANNQVTATVKDANSPINITFKGTE------------- 213 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLN--LTGQ-APYKLKIGAPA 302 CW+ V G + + L A L +GA Sbjct: 214 ---------------GSCWIGV-MVDGNYTYQHTLQAGETQTTALPANAANATLILGASN 257 Query: 303 AVQIQYQGKPVDLSR 317 V IQ G + L + Sbjct: 258 NVAIQVDGADLTLEK 272 >UniRef50_B5YKY2 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKY2_THEYD Length = 257 Score = 135 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 95/318 (29%), Gaps = 63/318 (19%) Query: 17 ARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPE 76 L+ R +L + + +AE+ +K ++ IEE K + R YI++YA + I Sbjct: 3 EELKKRRLELKKTLEEIAEKTKIKKHCLQLIEEGKFDELPIEVYTRAYIKTYAESIGIDP 62 Query: 77 EELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDR 136 +L E+ + V ++ + + ++ Sbjct: 63 SIILKDYEEYLKTKKQNVQQIELKPKFESEPEPKPEILK--------------------- 101 Query: 137 KAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAV 196 K+ ++I ++ + +++ + D PP ++ V Sbjct: 102 KSSDKKIFSLKKFPAWAMTAGIIFAVIFVIIFLIQFDKKEYEIPPPPSIKQEVISENTKV 161 Query: 197 TAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALV 256 + +Q V ++ Sbjct: 162 QEKIDKNEQKQEISVHQQSLKIE------------------------------------- 184 Query: 257 MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 W+ +T K+ + + L +KL IG V+I + K DL Sbjct: 185 --AIDKVWMRIT-IDDKEKKEFLLNPGQKIELQADKSFKLHIGNAGGVKILFNDK--DLG 239 Query: 317 RFIRTNQVARLTLNAEQS 334 + T QV L L +++ Sbjct: 240 KLGETGQVVYLNLPQDKN 257 >UniRef50_B3ENQ0 Transcriptional regulator, XRE family n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ENQ0_CHLPB Length = 301 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 94/298 (31%), Gaps = 26/298 (8%) Query: 18 RLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEE 77 +L AR++ GLS + V+ ++ + + IE + ++ +++ YA ++ I + Sbjct: 17 KLTQARKERGLSLEEVSAETRIQKNHLEKIEAGDLTFLPS-AYVYAFLKEYAEVIGIDDP 75 Query: 78 ELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRK 137 +L+ + + + ++ S + + L Sbjct: 76 QLIESCRDELSIPTDLKSRKEAQSAEEDSSETGDRLSGIFGAA----------------- 118 Query: 138 AQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVT 197 + A S L + V L P + PA+ Sbjct: 119 -----SSAGAGISPVVLVGGAVFLVIVLLAVGFFMFSGVRENPQMTPRQNLETEALPAIP 173 Query: 198 APAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVM 257 P PA+ + ++ S + +P A + A + T +V Sbjct: 174 EPEPALVEPDSVALADSLQEGSDES--SPELAVKQEAWAKDVSFLPDSPTSPYQQVLIVR 231 Query: 258 NFTADCWLEVTDATGKKLFSG-MQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVD 314 W+++ G +++ G + L + + IG P V++ G+ V Sbjct: 232 ITKDLSWVKIIADDGDRVYPGAAFKAGEVLRYEAKRKLWVNIGRPPFVELYLNGEKVP 289 >UniRef50_B8HSZ0 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HSZ0_CYAP4 Length = 287 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 99/338 (29%), Gaps = 67/338 (19%) Query: 1 MNTEATHD--QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS 58 M T + GA+L+ R++ +S V+ + ++ ++ IEE + Sbjct: 1 MGTVNLEQIRAEKLAELGAQLKQLRQEKAISLDHVSAKTMIQRRLLQAIEEGRLDQLPEP 60 Query: 59 TFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTW 118 + +G+IR +A + + E P + +AP + + + + Sbjct: 61 VYTQGFIRRFADALGLNGTEFARAF----PAISTPIAPQSKHWWQRLPSAQLRPIHLYLL 116 Query: 119 LVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTS 178 ++ V +SG + +R ++S T S Sbjct: 117 YIVVVATAVSGLSYSVNR----------------------------AADSSAVNTGLTGS 148 Query: 179 TPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPL 238 TPP S + TAP V + P Sbjct: 149 TPPPSPGVGPKQSPLLTTTAPRTTVL----------------------------PSSQPT 180 Query: 239 PTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI 298 T T + ++ + W+EV G++++ G+ T + ++ Sbjct: 181 ATPTPATPTQTEPAVKVGISLRQESWMEVI-VDGQRVYEGILASGTQRTWTAKQKLVVRA 239 Query: 299 GAPAAVQIQYQGKPVDLSRFIRTNQV--ARLTLNAEQS 334 G V + G + V A Q+ Sbjct: 240 GNAGGVMVAVNGTQ--PKPMGASGAVEEAVFASPVTQT 275 >UniRef50_D1C2J1 Helix-turn-helix domain-containing protein n=2 Tax=Thermomicrobia (class) RepID=D1C2J1_SPHTD Length = 274 Score = 134 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 89/297 (29%), Gaps = 42/297 (14%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G LR+AR G+S + + + +E ++ + RG +R+YA+ + Sbjct: 3 EFGELLRHARSYKGVSLREAERATKINRHHLAALEREEFEELPPLIYARGIVRNYAQYLG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + +L E+ R+ + K W F + V++ + Sbjct: 63 LDPVAVLALFEEVHGQRSGG---FRVVPATKPLNIPSHWAPNFAIIAFMVIMSAVIFAFL 119 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 E+ L+ +P S + + T ++ Sbjct: 120 YSAYFAPEDAPPTGPAGIVGLA-----------------------SPTPSAEASPTGSEG 156 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 ++T P +P V P+ TPV+ + Sbjct: 157 GSITIATPTTEPTSTPVPEPT--------------VPAAAETPTEEPTPTPEPTPVSTTH 202 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 + T+ W++VT G+ +FS + G + G +Q+ G Sbjct: 203 TFAVTATSSVWVQVT-VDGQVVFSDVLPGGETRVFEG-EQMYVTAGNAPFIQVAVDG 257 >UniRef50_B4S568 Transcriptional regulator, XRE family n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S568_PROA2 Length = 297 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 97/314 (30%), Gaps = 32/314 (10%) Query: 3 TEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLR 62 E + T ++R R++ GL+ + ++ ++ +K S + IE ++ Sbjct: 2 EEEGRVGSAIETLSEQIRQIRQRSGLTLEEISGQIKIKKSHLEKIESGDMTFLP-PVYVF 60 Query: 63 GYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQ-SFSLGKRRKKRDGWLMTFTWLVL 121 +++ YA + I E L+ + + + Q L L Sbjct: 61 AFLKEYASALGIDNEALIEQCRDEFSIPTEEQVLRQLPKQPDTLSMFIPPQGFKGMLLNL 120 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 + + + + + S+ + + PA PP Sbjct: 121 QDAVPVQVLIGGGIAFILVILLLLAIFFNRGQESAETPAAVEKTPVETVVEKPA----PP 176 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 A VDTT ++T A A + +Q A A Sbjct: 177 AIVDTTPSDTLGAAAMADESTLAVKQQAWAKDISFLPKDPA------------------- 217 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF-SGMQRKDGNLNLTGQAPYKLKIGA 300 +V W++V G+ ++ G +KD L + + + IG Sbjct: 218 ------SPLSRVLVVRIVNDLTWVKVIADNGEIVYPGGQFKKDEVLRYEAKKKFWVNIGR 271 Query: 301 PAAVQIQYQGKPVD 314 P+ V++ G+ V Sbjct: 272 PSNVELYVNGERVP 285 >UniRef50_A1AL47 Transcriptional regulator, putative n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AL47_PELPD Length = 289 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 100/334 (29%), Gaps = 54/334 (16%) Query: 1 MNT-EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAST 59 M+ E + + A T G LR RE G S Q A + +R +E+D+ Sbjct: 1 MSDRETNNADHGASTPGTILRRCREFRGASIQDAAGATKIAEHHLRALEQDRFTEFANPA 60 Query: 60 FLRGYIRSYARLVHIPEEELLPGLEKQA--PLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 +L+G++R Y+ + + ++++ E+Q P P + S R+ + Sbjct: 61 YLKGFLRIYSDYLGLSPDDMIRLCERQHVPPGEGGDGRPEKKRSFRSVRRSFPWKKLFLP 120 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 ++L ++I S +P P T Sbjct: 121 AVLLLMMIVTSVLL----------------------------DHSPLPRRHLPRPLPLPT 152 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 + P A++ +++ T A+T A V + + D A Sbjct: 153 AVPVAAIQPALSSSATVALTEEAEPVVEAEQP--------------------QSHDEAQA 192 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 V+ + + + L VT G L+ Sbjct: 193 EKGAHPDAAAEVSRGVVVRLRVIHNASLAVT-MDGTTSQHYELTSGDTFEWKADRTIALE 251 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNA 331 + + ++ G+ L + L+A Sbjct: 252 LSNAGSAVVELNGRS--LGSLGANGAPVYVLLDA 283 >UniRef50_Q67P24 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67P24_SYMTH Length = 313 Score = 133 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 96/304 (31%), Gaps = 7/304 (2%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL 71 G RL+ AR GL+ + V E ++ + +E + +++G++RSY Sbjct: 1 MEEIGRRLKAARLAKGLTLEQVEEETRIRKKYLDALESGRTVLIPGEVYVKGFLRSYGNF 60 Query: 72 VHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAW 131 + + E L+ + AA+ ++ + + A+ Sbjct: 61 LGLDGEGLVEEYKALKARPAAEDGAGNGGPAEAPAREPEAAIAASAPRASAE--PRQPAF 118 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNT 191 R++ + + + ++ L A+ Sbjct: 119 ATPPRRSSRSRPKRRRNGPGPGVYFLRRLMVALILILPLAAAGWWFWGRQAAAPPPQEPG 178 Query: 192 QTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVAD 251 Q + + + P P T A Sbjct: 179 QVAQEPGTTAQQPEPEPEPEPEPEPEPEQPPASGQPVPAKPVITVGAPQGDEVDITITAS 238 Query: 252 PNALVMNFT-ADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 L M+FT WLEV + G+ L+ + G L+ TG+ ++++IG A Q+ G Sbjct: 239 EVQLEMDFTQGFPWLEVY-SGGETLYWS--KASGPLSFTGKD-FRIRIGFVAGFQLALNG 294 Query: 311 KPVD 314 +PVD Sbjct: 295 EPVD 298 >UniRef50_Q73JG7 Putative uncharacterized protein n=2 Tax=Treponema RepID=Q73JG7_TREDE Length = 372 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 98/367 (26%), Gaps = 54/367 (14%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G L R + L VA + + +E D A ++ G++R+Y + Sbjct: 3 EIGKLLTETRIEKDLELDQVARETNIAKRYLEALESDDYSVFPAEPYIVGFLRNYCEYLD 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + EE+ ++ P + + ++ F L VI + + Sbjct: 63 LDPEEITNLYKQI--KIQETSLPPDALLEKRGFALSKPLIIGFGVLAAIAVIITVVFFAF 120 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSV----------------------------- 164 + ++ + A+ + + + Sbjct: 121 KSWIPAIQQKRSQANVGTEVREKREAKTHEISQKKYEQRIFEGDVLKLTIEDKEYKIEVE 180 Query: 165 ---PLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVS-----PSQA 216 P T + +V N P V +D + + Sbjct: 181 KVSPKLNLKTETGNQIISLGQTVKIDLNNDLIPDVEITLEDIDKNNPESGALVSILTGNS 240 Query: 217 NVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF 276 + + + D + T + + A P L F C +A Sbjct: 241 ISEGKPSTETDLVVSEDDSQAAATYKVLFESGSAYPVTLNATFRGYCLFR-YEADRTNRE 299 Query: 277 SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQY--QGKPVDLS------------RFIRTN 322 +K L + ++ AV++Q GK VDL ++IR + Sbjct: 300 ERYYQKAEQLTVQANNGLRIWASNGNAVKLQVVAGGKTVDLEVSRPGEVIVKDLKWIRDD 359 Query: 323 QVARLTL 329 + R Sbjct: 360 ETKRFKF 366 >UniRef50_B4RGC8 Putative transcriptional regulator n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RGC8_PHEZH Length = 343 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 90/306 (29%), Gaps = 20/306 (6%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + G LR R+ GL+ +AER ++ S + +E + A + F GYIR Sbjct: 42 DPLQSHASIGEALRAVRQDRGLTLDELAERTRVRRSYLEALEAMRLDALPSRPFTIGYIR 101 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 +YA + + E + + P+ + + + V Sbjct: 102 AYALALGLDPEAAVERFKADEPVLDEPLRAPIGVPDERDPR----------------VAA 145 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + A +SA + + Q+ L T + P T P Sbjct: 146 FIAGAVVIVVAIVLWNVAQRAMNASAPPPPKASEAQAWKLLAETRSGPVTLGPPLP---- 201 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 + P + + + + S + AP T A P + + Sbjct: 202 APVESTIPPLYETPGLAEAGPDGKGNDSAPANINDLSDAPLLDLTTLPATFTPKGKVYDS 261 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQI 306 + + + + L + +G F+ + + + P+ Q+ Sbjct: 262 GNPQLGSLVTLQALNNAALIIRGTSGSVYFARQLAAGEAYKVPQLPGLTIDVSEPSDFQV 321 Query: 307 QYQGKP 312 G+ Sbjct: 322 FVAGQS 327 >UniRef50_B7KLL6 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KLL6_CYAP7 Length = 407 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 55/405 (13%), Positives = 106/405 (26%), Gaps = 79/405 (19%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN + A L+ R + LS + +A R +++ + +E + + Sbjct: 1 MNKLNPSQTEKLREIAAYLKQKRIEQSLSLEQIASRTFIRIHILEALETAQVDELPELIY 60 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK------------- 107 ++G+IR Y ++HI L L + A + P + K Sbjct: 61 VQGFIRRYGEVLHIDGNSLAKRLSQTDKTVAVETPPPPQPQPQVKAKPQPQPQPQVKAKS 120 Query: 108 ------------------------------------KRDGWLMTFTWLVLFVVIGLSGAW 131 + L + IG S A Sbjct: 121 QPQPQPQPQPQPQVKAKPQPQPQPQPAIRATQSEAVSTGNIPRYWLLLAIIGCIGGSIAL 180 Query: 132 WWQDRKAQQEEITTMADQSSAELSSNSEQGQSV--------------------------- 164 + ++ + + + + + Sbjct: 181 LYALSLSRTPDPVNQSALAPTSPPPTATKPPQPTPKVVNTSSEKTTIQPATLKPSPSPVA 240 Query: 165 PLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATP 224 + P + S A+ P+ + A V + V+ A + Sbjct: 241 SPVAKPSPSPVASPVAKPSPSPVASPVAKPSPSPVASPVAKPSPSPVASPVAKPSPSPVA 300 Query: 225 APTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDG 284 +P A +P A + P ++ + WL++ A GK + G+ K Sbjct: 301 SPVAKPSPSPVASPVASPKPSPSVAESPLSVAVALDGTSWLKIQ-ADGKTQYEGILEKGV 359 Query: 285 NLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTL 329 T Q + G AV P R +V + L Sbjct: 360 QKTWTAQEKLIIIAGNAGAVSYAVNQNPA--QRLGEPGEVKEIKL 402 >UniRef50_D1Y2L8 Transcriptional regulator, XRE family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L8_9BACT Length = 332 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 91/333 (27%), Gaps = 15/333 (4%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + + GA L+ RE L+ ++ C++ + + DIE A + Sbjct: 9 SDRKKDEPRSLQELGAELQRLRESKNLTLDDISAATCIRKNFLEDIEAGNFVRFKALVYA 68 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RG++R+ L+ P EL +Q + AP + R W Sbjct: 69 RGFVRTCTTLIGAP--ELWNEYRQQLTIDTFG-APQDAPEFIARSGSTGKWHSMMPPSSA 125 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 G R + + + + + + Sbjct: 126 RAGAANMGLPARGFRHSSARRNGVVLLVLLTVGALGGLWFNWDRIRGEVSKLQREQAYDE 185 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 A AV + A A + A AP +A P + Sbjct: 186 MKSREAEQARHNEMQKAEEAAVQREMQARRQTENAGAEPDAEKAPASAEKPAAMPEEMGE 245 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 A AL + + DCWL V + L + + ++ GA Sbjct: 246 -------AAAKAALTIRASGDCWLRVREGDRDLLVT-TVSEGFEQTFPLDRTLSVRFGAG 297 Query: 302 AAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS 334 V + G+ D + V R + S Sbjct: 298 QNVLVSTNGR--DFASPGA--GVQRFEYRPDGS 326 >UniRef50_A1VNF3 Putative uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VNF3_POLNA Length = 309 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 101/320 (31%), Gaps = 34/320 (10%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 + T GA LR AR+ GL +A L + + ++ +E+D+ F R S R Sbjct: 24 QQDTAGALLREARQSQGLDIATLAALLKVPLHKLQALEQDRLDLLPDPVFARALASSMCR 83 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 ++ + +L L P +A Q+ + + R G W + Sbjct: 84 ILKLDPAPVLHRL----PAISAFKVTSQNRGINAPFRARSGRHAAPLWAHI--------- 130 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + + + S+ + + P + A Sbjct: 131 ----------SRPAVLVGLALLLGALVLIFLPSIQQEIARHRQGGQDAANPTQLVEPA-- 178 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + + + + + A A P T + V Sbjct: 179 --------SVTTTVTTPVSAGNEASGMTPNPSLGSMVPADVAVPAIPTNTLSSAGAVDVN 230 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 A+ + ++VTDA G + R + +++G P + + +Q+Q +G Sbjct: 231 PDAAITFSAKGASRIKVTDAKGVVVMDRAFRAGESASVSGAPPLTVVVSRANLMQVQVRG 290 Query: 311 KPVDLSRFIRTNQVARLTLN 330 + DL+ + N VAR + Sbjct: 291 QDFDLTSVTK-NNVARFEVK 309 >UniRef50_C6NWC2 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWC2_9GAMM Length = 357 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 74/331 (22%), Positives = 125/331 (37%), Gaps = 56/331 (16%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+ + ++ LR REQ G + Q VAERL ++ + V +E+ + A + F Sbjct: 1 MSADRQEATDDF----DVLRRVREQRGWTPQQVAERLHIRAAQVEALEQARFEALPGAAF 56 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RGY+++YARL+ + E LL ++++ K W M LV Sbjct: 57 ARGYLKNYARLLDLDPEPLLDLFDRRSNGAGLKPTDHVLPDSEDPLLD-YRWPMLLVSLV 115 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 L I W W + P T + + +++ Sbjct: 116 LAAAIAGIAWWLWGG-------------------------EAAAPATTESMSAAGPSTSA 150 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 PA+ ++ + PAPA +V + + + + + A TAAT Sbjct: 151 PAASSISSAAASAVRLAVPAPAATASVASVAAATGSAIVAPSQSAATAAT---------- 200 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL-TGQAPYKLKIG 299 L FT CW++V DA G+ L + + + + G PY++ +G Sbjct: 201 -------------GLHFVFTGRCWVQVQDARGQTLLAELAEAGQTIVVDKGLPPYRILVG 247 Query: 300 APAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 V+I Y GK + L + VARL + Sbjct: 248 KAQNVRISYDGKSIPLP--VNALGVARLQVG 276 >UniRef50_Q03YM6 Xre-like DNA-binding protein n=3 Tax=Leuconostoc RepID=Q03YM6_LEUMM Length = 291 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 105/334 (31%), Gaps = 66/334 (19%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 MN T+ G +L+ AR + LS + E ++ + IEE+ + Sbjct: 1 MNETLTNQ------IGEQLKAARLEKQLSLDDIQEITKIQRRYLSAIEENNLSVLPGDFY 54 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRR---------KKRDG 111 +R +IR YA V + +ELL + + R + ++ + G R + R Sbjct: 55 VRAFIRQYALAVGLHPDELLGETKPISMSRTSDLSRAHRDNDGIVRAGIDNTPTARSRLA 114 Query: 112 WLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTT 171 M L L +++ L W+ + N+ T Sbjct: 115 NSMPTIGLGLLILVALIVIWFVLTH---------------------------IGTNSQQT 147 Query: 172 TDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATT 231 ++ S + V +++ + +A + + + + +P Sbjct: 148 SNGGNISVSTSEVSKSSSKSSASKSSASSSSEESSILDLGTPETNTSLQTTIY------- 200 Query: 232 PDGAAPLPTDQAGVTTPVADPNALVMNFTAD-CWLEVTDATGKKLFSGMQRKDGNLNLT- 289 ++ + +V+ ++V DA+ L + + + Sbjct: 201 ------------NLSNENTKKHTVVITAKNTGTSVKVNDASSNILLNETLASG-SKTVEI 247 Query: 290 --GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT 321 G + L+ + G+ V++S + Sbjct: 248 PSGTTAFNLQFSNVNNASVTVDGQNVEVSGATTS 281 >UniRef50_C1TRT9 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT9_9BACT Length = 425 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 102/339 (30%), Gaps = 54/339 (15%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + + + + G RLR R + G + VA+ ++ S + IE + + + Sbjct: 17 DDLNSDNYESLASLGDRLREERNRQGFTLDYVADETKIRKSYLESIELGEMDVFNGNVYR 76 Query: 62 RGYIRSYARLVH-IPEEELLPGLEKQAPLRAAKVAPMQSFSLG---KRRKKRDGWLMTFT 117 RG+++ Y + + L + + P +LG + Sbjct: 77 RGFVKKYLGFLGRMD---LWKSYDPILVENVSDKKPEPQPALGDFTPPARGFRKGSRKGV 133 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 +L+L VI +G + W +R+ +E+ + ++ AE + + + + Sbjct: 134 FLLLMAVIISAGWYVWSNREGLHDEVVRIQEEKVAEQEKREGEAKLLAARQREIAAASAD 193 Query: 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAP 237 + + + +PA + Sbjct: 194 LASSDISEVALAGASVDSAVSSSPASVESDIPI--------------------------- 226 Query: 238 LPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLK 297 L + D W+ +T G+++F G + + + Sbjct: 227 -----------------LTIKALKDSWIRIT-REGERVFGGTLKAGATSEVEATGLIHVI 268 Query: 298 IGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 G P + + + GK VD S +++ + Sbjct: 269 YGRPETLSVNWNGKRVDPSTEGA--GPVHFVYSSDGTQK 305 Score = 82.7 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 45/153 (29%), Gaps = 3/153 (1%) Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQ 242 T + P+ + V S + A P + Sbjct: 270 GRPETLSVNWNGKRVDPSTEGAGPVHFVYSSDGTQKAITSDEAEALWKEPSRSVSAEKAD 329 Query: 243 AGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA 302 L+ DCW++ T GK ++ G +K + + K+ G P Sbjct: 330 TEEKPAPVPKKLLIRATKGDCWIKAT-RDGKTVYVGTLKKGDQREMDLTSSIKVIFGNPT 388 Query: 303 AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSP 335 AV + GK D R +V R+ + S Sbjct: 389 AVAVSLDGK--DAGRPGTPGRVGRIVYETDGSV 419 >UniRef50_Q165I9 Putative uncharacterized protein n=18 Tax=Rhodobacteraceae RepID=Q165I9_ROSDO Length = 414 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 98/355 (27%), Gaps = 44/355 (12%) Query: 13 LTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLV 72 L G +R R +G S V L +K S + IE+ A F+ GY+RSYAR + Sbjct: 24 LRLGDVMRGERATMGKSLLDVQRELRIKASYIAAIEDCDPDAFDTPGFIAGYVRSYARYL 83 Query: 73 HIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRK------------------------- 107 + +++ +++ A ++ + K ++ Sbjct: 84 GMNPDDVFETFCEESGFTVAHGMSAEASVIKKTKQTPKTGRSLEHDMFKRPGTPFIPAGE 143 Query: 108 ---KRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSV 164 R + LVL +I G + + Q ADQ+ LS + Sbjct: 144 SFWSRIEPGAVGSSLVLIALISAIGFGGYTVLQEVQRVQVAPADQTPIVLSDLDPLDGVL 203 Query: 165 PLNTSTTTDPATTSTPPA----------SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPS 214 A + A D A + + Sbjct: 204 AAAPDAAASGALPAGGDAVRIDPLDQLFRPDALDVPVMIARDAPIATLDPRTVGSFAQSA 263 Query: 215 QANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKK 274 Q + + + D A AL M W+ V+ G Sbjct: 264 QPEPERLSDSLLLESELAAAEQDQVVDPQVPIVVKAPGPALRMVAVRPAWVRVSAPDGTV 323 Query: 275 LFSGMQRKDGNLNLT-GQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLT 328 + + + G P L+ G A+ G+ + + +T Sbjct: 324 ILETIMEPGETWDAPVGGEPPLLRTGESGAIYFALNGE-----YYGPVGKTGTIT 373 >UniRef50_B4W757 Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W757_9CAUL Length = 361 Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 95/321 (29%), Gaps = 29/321 (9%) Query: 11 EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70 E++T G LR ARE G S ++ + + +E++ + + F GY+R YA Sbjct: 27 ESVTLGDGLRRARESSGKSLADLSAETKVHSRFLTALEQNDWSSLPSRVFAIGYVRGYAA 86 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 + + E+ + ++ +P +A + + ++ + Sbjct: 87 ALGLDEQLAVERFKRDSPDTSAPLKAPIGIAFEDVKRYSPRIIAVVAV-------AALAI 139 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 W + A S S VP A + P Sbjct: 140 VGWNVFQRINLMKAPRA--SDIAAVPESWTLGDVPGQNGLIDLSAPRAAP---------- 187 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 + PA+ + + + A A TAA + V A Sbjct: 188 -----LDQTTPALYITPGLEAQLTGIDPNDPAVLAATAAANNAPVQKAFNPRGAVYGAPA 242 Query: 251 DPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQG 310 + +V+ L V G+ LF+ + + PAA + G Sbjct: 243 TASQVVIQAKKAGALVVRLGDGQALFARQMAAGEAWRAPMGVSATIDVSDPAAFDVYLNG 302 Query: 311 K-----PVDLSRFIRTNQVAR 326 + P L+ + N A Sbjct: 303 EHGGILPAVLTPLAQLNSRAE 323 >UniRef50_D1RE75 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RE75_LEGLO Length = 194 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 4/189 (2%) Query: 1 MNTEATHDQ---NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT T D+ GA L + REQ G + + VA +L L+ + IE ++ Sbjct: 1 MNTITTLDENILENDRNPGAHLASIREQKGYTIEYVANKLHLRARIIELIENNEFHLLPE 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 F++GY+R+YA+L+ E L KQ + + S + K + + FT Sbjct: 61 PVFVKGYLRAYAKLLGTSPEPYLAIFNKQYLVERKPERALWQQSKRESHKA-EHIIRWFT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L VI G WW ++R QQ T L+ + +++ + + + + Sbjct: 120 LLFALGVIVAVGIWWQKNRDNQQLFSTNSPAPVDLSLNHQTPVNKNLEIKLTDISKMQSL 179 Query: 178 STPPASVDT 186 P + Sbjct: 180 LNPKPEMSP 188 >UniRef50_B9YCY9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCY9_9FIRM Length = 293 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 103/331 (31%), Gaps = 48/331 (14%) Query: 12 ALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLAS-TFLRGYIRSYAR 70 GA L+ RE+LG + + ++ + + V+ ++ +E+ +++R ++R Y + Sbjct: 1 MKEIGATLKKRREELGYTLEEMSNKTRISVAQLKALEDGDLEFFKDDLSYVRYFVRFYCQ 60 Query: 71 LVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGA 130 +++ + L L + ++ + + + + + G Sbjct: 61 ALYLDFDPLRDQLSQDLDQFTETMSLKAIHDREEMQSNIEKKINKAS-----------GT 109 Query: 131 WWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATN 190 + +K I+ +A + + + ++VP + P + T + + T Sbjct: 110 LKKEKKKIDYSLISLLAVIAVMLVCLSVVLFKTVPNWFKSEPKPDSFPTADVTPTPSQTP 169 Query: 191 TQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVA 250 TP V +A T AA P+ Sbjct: 170 ADTPDV---------------------------IDQPSALTVTMAANDPSTYEVRGWKAQ 202 Query: 251 DPNALVMNFTADCWLEV--TDATGKKLFSGMQRKDGNLNLTGQAP----YKLKIGAPAAV 304 + + + F D W+ V D S + + +T A + G Sbjct: 203 ESFTIAVTFAQDTWIRVLENDVATDNPASTTYHANDVMEITRTASQDLKITIHFGIVKNN 262 Query: 305 QIQYQGKPVDLS---RFIRTNQVARLTLNAE 332 I G+ V L + Q L E Sbjct: 263 TITINGEAVTLDAGIAAKTSGQKINFILKGE 293 >UniRef50_Q5ZV95 DNA-binding protein, putative n=4 Tax=Legionella pneumophila RepID=Q5ZV95_LEGPH Length = 189 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 4/188 (2%) Query: 1 MNTEATHDQN---EALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLA 57 MNT A D+ E G L R+Q G S + VA +L L+ + IE Sbjct: 1 MNTIAAMDETRNNEFTNPGYELAALRQQKGYSIEYVASKLHLRARIIELIEAGDFDLLPQ 60 Query: 58 STFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFT 117 F++GY+R+Y++L+ + E L Q K + K K + ++ FT Sbjct: 61 PVFVKGYLRAYSKLLGVSPEPFLTLFNAQY-CFEKKPERAALWQSKKESHKAEHFIKWFT 119 Query: 118 WLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATT 177 L V+ G WW +++ +Q + + ++SE + + P T Sbjct: 120 ILFAIGVLVAVGIWWQKNKDSQSIDTPKENSSGLSISETSSEIKLTDLSKMESLLTPNNT 179 Query: 178 STPPASVD 185 P + Sbjct: 180 QMTPLEKN 187 >UniRef50_C4FT96 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT96_9FIRM Length = 349 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 105/325 (32%), Gaps = 32/325 (9%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR+AR + G + + + ++ + IEE + + + R +++ YA +V Sbjct: 3 ELGTKLRDARIEKGYTLNTLQQMTKIQKKYLVAIEEGRFEEIPGNFYTRAFVKQYADMVG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + + LL + + ++ + + + Sbjct: 63 LDGDSLLLDYQSEIEAVEHGLSQYEEQETEAMPSRLNRN--------------------- 101 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 +AQ E+ + + V + T + ++++ + Sbjct: 102 ---QAQSEQSLLDRYAKHLPVLMLAGVFILVMAFITWTIYSVSQRERQQQANSSSATSLV 158 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 +V + A ++ + SQA +D A G + + Sbjct: 159 SSVEPSSAAQHAASSSSETSSQAKIDGAEFFGDVQGKRVSGEGE---ETTYELYAPMNKF 215 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQ---APYKLKIGAPAAVQIQYQG 310 + W+ V + + + L++ + ++++G P +IQ G Sbjct: 216 KFTVKGKNYVWVGVYE-DEEITMDTTVTEGETLDIKVKGQTRSVRIRLGYPEGAEIQVNG 274 Query: 311 KPVDLSRFIRTNQVARLTLNAEQSP 335 K V ++ T+ + L+A+Q Sbjct: 275 KTVKIANDYITDSIV-FRLHADQPT 298 >UniRef50_C5V4P9 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4P9_9PROT Length = 299 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 109/330 (33%), Gaps = 56/330 (16%) Query: 2 NTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFL 61 + EA + + + G LR ARE +G+S V ++ L + +E D + FL Sbjct: 25 SQEAAVVEQASPSVGCILRTARESMGMSIDDVVVKIKLAPRQIIALEADDFQVLPETAFL 84 Query: 62 RGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVL 121 RG++RSYA+L+ + + LL L + + + K ++++ L++ LV Sbjct: 85 RGFVRSYAKLLQLDAQPLLDALPGAVVVNTVQAKVEEPLPTEKTSRRQNINLLSAALLVT 144 Query: 122 FVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPP 181 ++ + N++ AT Sbjct: 145 VLIAVFAAW-----------------------------------QNSTPQQPVATIDLAA 169 Query: 182 ASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTD 241 + V + Q + A + A + AA T + Sbjct: 170 SDVASLPMPDQVEMLVASEVSEVIDVAASSPVVAPVSMVMSASTVAAAKTVSALRLVFDK 229 Query: 242 QAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP 301 ++ L A L + G APY + IG Sbjct: 230 ESWAEIKDQSGKVLARQVNA--------------------PGSELRVEGVAPYTMVIGHA 269 Query: 302 AAVQIQYQGKPVDLSRFIRTNQ-VARLTLN 330 +AV + Y KPVDLS ++ VAR+TL Sbjct: 270 SAVHLFYGEKPVDLSSYVNAGSDVARVTLE 299 >UniRef50_Q7ND38 Glr4398 protein n=1 Tax=Gloeobacter violaceus RepID=Q7ND38_GLOVI Length = 262 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 81/260 (31%), Gaps = 1/260 (0%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M TE+ + + G+ L R+Q G S V+ER + + IE + + Sbjct: 1 MTTESFQPDS-LKSVGSLLARGRQQRGWSVDDVSERTRIPRRYLLAIESGQTDHLPEPVY 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 +R +IR Y+ LV + ELL L+ A A A K L Sbjct: 60 VRAFIRKYSDLVELDGTELLRELQPAAAAAEAVTAGTPIERASASLGKPTLRPFHAWLLY 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 +VI G + + R + E ++ + A + Q P +T A Sbjct: 120 GALVILALGGFSYLQRSQEPEVVSAVKPTKPAPTKPAQGKTQKPPAKPTTQGAGAFGPPA 179 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 PAS T A A + P A D A T G + Sbjct: 180 PASKGLQMQLAMTQASWVRVIADGRKAFEGELPVGAKRDWQAEKQFTVRAGNAGGVLITL 239 Query: 241 DQAGVTTPVADPNALVMNFT 260 + + + F Sbjct: 240 NDRSLGQLGKSGEVVERVFR 259 Score = 74.2 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 4/129 (3%) Query: 205 PQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQA-GVTTPVADPNALVMNFTADC 263 Q+ VVS + PA P A G P + + + T Sbjct: 136 SQEPEVVSAVKPTKPAPTKPAQGKTQKPPAKPTTQGAGAFGPPAPASKGLQMQLAMTQAS 195 Query: 264 WLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQ 323 W+ V A G+K F G + + + ++ G V I + L + ++ + Sbjct: 196 WVRVI-ADGRKAFEGELPVGAKRDWQAEKQFTVRAGNAGGVLITLNDRS--LGQLGKSGE 252 Query: 324 VARLTLNAE 332 V E Sbjct: 253 VVERVFRPE 261 >UniRef50_C6KUI1 XRE family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6KUI1_9BACT Length = 316 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 107/336 (31%), Gaps = 28/336 (8%) Query: 1 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF 60 M+T+ + A++ G +LR ARE G + VA RL ++ + V +E D A T+ Sbjct: 1 MSTDEFA-SDPAVSAGQQLRRAREGRGWTLVQVAGRLHIRPALVEALECDDYAPFGAVTY 59 Query: 61 LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120 RG +R+YA L+ + +L + G Sbjct: 60 ARGQLRNYAALLGLDASSVLQ-------GVTPPRLDQPGKLARNAPELHPGR-------- 104 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 W + A + + A+ + P +S + ++ Sbjct: 105 ---------PWLVRLGGAAVVLVLAVLGALWADAHRERAPQVAQPALSSGAAVASGSAPL 155 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 T A V+ + + A A T Sbjct: 156 AQDAAQPRTVPAHEPTAQAEALPAEAPAAGVATGEQPELSGAGQGEQQTAPAAEQAGSVT 215 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 + L++ A W EV+D++G++L + + G P +L +G Sbjct: 216 AAVDDEAALDGQAELLLRTRAVSWAEVSDSSGRRLIYDLLSPGREHTVRGLPPLRLLLGN 275 Query: 301 PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 V++ Y G PV L V R+ L + S A Sbjct: 276 APVVEVIYNGAPVALPA---GEHVVRMRLGSAPSTA 308 >UniRef50_Q6MGU1 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGU1_BDEBA Length = 374 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 116/372 (31%), Gaps = 62/372 (16%) Query: 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIP 75 G L+ ARE+ GLS + L + ++ IEE A TFLRG+++SYA +H+ Sbjct: 5 GELLKKAREEKGLSLHEIGLSLKISSKVLKAIEEGDETQLPAKTFLRGFVQSYANFLHLN 64 Query: 76 EEELLPGLEKQAPLRAAKV----------------------------------------- 94 +++L ++ K Sbjct: 65 SDQVLEVFYEEMGSTKPKPYIRQTEEPKAAGTTTESETKPAGAATEGTAEAAAPAPEATV 124 Query: 95 ------APMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMAD 148 P S + G + K + T+ L L V++ + + +E + Sbjct: 125 TPIRKTPPPTSSNHGMQSLKENKNTKTYIILGLGVILVGLILFTKKMIDKYSKEAEVPSA 184 Query: 149 QSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQN 208 + + + + ++ T T+ +TP + T T V++ A + Sbjct: 185 EVAQTMEGATPVVVDTTIDGGTLTEVDPNATPGPLGNLTTAPTPAATVSSTATPAASPTS 244 Query: 209 AVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTT------------PVADPNALV 256 AV +P A A+ A T AP T P L+ Sbjct: 245 AVSTPVTAATPAASPTATPKPTATPSPAPTATPSPTPVASPSPTPTPTPKPESGKPVELI 304 Query: 257 MNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLS 316 + +E + GK + ++ K+ AV + GK V + Sbjct: 305 VEALDSVEIEYSAPNGKPQKIR-LSAEQVHTFKSKSGLKINFSNGGAVNLILNGKEVGIP 363 Query: 317 RFIRTNQVARLT 328 + RL+ Sbjct: 364 --GDLGKPIRLS 373 >UniRef50_Q72JG0 Putative uncharacterized protein n=2 Tax=Thermus thermophilus RepID=Q72JG0_THET2 Length = 285 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 83/317 (26%), Gaps = 34/317 (10%) Query: 14 TTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVH 73 G +LR ARE+ GLS A +L LK + +EE + RGY+R YA L+ Sbjct: 3 ELGEKLREARERRGLSLGEAARQLALKAEVLEALEECRFERLPEPALARGYLRRYALLLG 62 Query: 74 IPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 + LL L + + + +L Sbjct: 63 LDPGPLLALYPSAPSLPPPAPPRPRRALWPWLLALALLGGLFYAGFLL------------ 110 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + P + + + P Sbjct: 111 -----------------WPRPPEKVVELPPPPPPEAPSRYTLRVQSDPPGARVYLDGFYL 153 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 P ++ + + + A A N Sbjct: 154 GQTPLETPPLEGGERVLRLERPGYAPLERRILLDRNLSLSLALTPEKPPPQEAAEEAPAN 213 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 LV+ WL VT G++L+ G+ L P +++ G P AV++ GK Sbjct: 214 KLVLKVEGRSWLRVT-RGGERLYEGIPEVGSELVF--DLPVEVRSGNPGAVRVILGGK-- 268 Query: 314 DLSRFIRTNQVARLTLN 330 DL Sbjct: 269 DLGPMGEPGIPVTRRYP 285 >UniRef50_A1WE17 Putative uncharacterized protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WE17_VEREI Length = 290 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 101/325 (31%), Gaps = 36/325 (11%) Query: 6 THDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYI 65 T + T G LR ARE G+ A+A L + VS + +E D + F+R Sbjct: 2 TEAADGQATAGGLLRQAREASGMHIAALAGILKVPVSKLEALEADDHSVLTDTVFVRALA 61 Query: 66 RSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVI 125 S R + + +L L + P +A A + + Sbjct: 62 ASVCRTLKVDAAPVLALLPQNLPRLSANGAGINAP------------------------- 96 Query: 126 GLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVD 185 + + S + + L P PA D Sbjct: 97 ---------VKSSAASATAFPGSASRSVILVVLALLLGALLLFFYPRHPPDAGVTPAPAD 147 Query: 186 TTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGV 245 AT A AP AV P A + +A ++A +A AG Sbjct: 148 APATTGSAADPAAQAPTAASDMAAVPEPPAAGMAGSAA-VHSSAAMAPASATAAQVAAGA 206 Query: 246 TTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQ 305 LV+ + W++V DATG ++++ P + +G + Sbjct: 207 GAGAGSAQLLVLRARSQSWVQVRDATGALALQRTLSAGESVSVAAPTPLSVVVGRADGTE 266 Query: 306 IQYQGKPVDLSRFIRTNQVARLTLN 330 +G P DL R N VAR + Sbjct: 267 ALVRGNPFDLRAVARDN-VARFEVK 290 >UniRef50_C1SGR3 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGR3_9BACT Length = 311 Score = 128 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 106/318 (33%), Gaps = 23/318 (7%) Query: 15 TGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHI 74 G+ L+N RE LG V E+ + + +E + + + + ++++YA + + Sbjct: 4 LGSTLKNKRETLGYDLDKVTEQTRISADIIAVLERGEYKSMPSYNHAKNFVKNYAEYLKM 63 Query: 75 PEEELLPGLEKQ-APLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWW 133 +E+ L+ + + + + K + +L ++I +G + Sbjct: 64 DLDEVQSLLDDECTKEDFNREVKYVAAPVTKETSAAPSGVKYIIPAILIIIILFTGFKVF 123 Query: 134 QDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQT 193 + ++ T +++ + ++ + + + T Q Sbjct: 124 TAMEKGKDLKQTEINENIKKE-----------VDETVDNPVSNDEVKEVIENLNQTEQQD 172 Query: 194 PAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPN 253 P P + + + + + AA P A Sbjct: 173 SLSDQPVPDKENKPQTPAKENSDSGKVD---------KDENAAMAAFMPEKKEEPAAVAK 223 Query: 254 ALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPV 313 +NF CW+ ++ GK+ + K +T + + + IG A V I Y + + Sbjct: 224 TAYVNFADVCWVHIS-IDGKEEMDFIAEKGNQREVTFRDYFLMDIGNAAVVSISYNNRTI 282 Query: 314 -DLSRFIRTNQVARLTLN 330 L + + + R ++ Sbjct: 283 AGLGAYKQPVKGLRFAVD 300 >UniRef50_B3QS81 Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS81_CHLT3 Length = 317 Score = 128 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 95/317 (29%), Gaps = 16/317 (5%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 + + + + L AR+ GLS + V +++ +K + +EE ++ Sbjct: 2 QESKSNSSLSNIASLLATARKDKGLSIEEVTQKVKVKPEYLLKLEEGNFGFLPPP-YVYA 60 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLM---TFTWLV 120 ++ YA + I + ++ + + S + + L W + Sbjct: 61 MLKEYASFLAIDPK-VIQQCRHDLNILTDEALNKLVVSNNEEKNDFASILENPEYRKWGI 119 Query: 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP 180 + + I + E ++ L P + P Sbjct: 120 VGAAAFGA---------LILLFIIISLFSGTPEPELIVKKVPETNLPAPPPVTPTQPNKP 170 Query: 181 PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT 240 + T + P P V P++ V + P P + + Sbjct: 171 TEAKPAPQTKPKPPEKKEPVKEVPPKKPEVAKTEPPKPEPVKQPEPEPESVKVESPKPEI 230 Query: 241 DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA 300 Q+ T LV T W++V G G+ + +++ IG Sbjct: 231 VQSAPTGKTKT--LLVKTLTDTSWVKVVSDGGSSTREGLVPPEQYRQYEASDEFEITIGR 288 Query: 301 PAAVQIQYQGKPVDLSR 317 V++ GKPV L R Sbjct: 289 AETVEVFLDGKPVSLPR 305 >UniRef50_C9RLU8 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLU8_FIBSS Length = 314 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 109/339 (32%), Gaps = 48/339 (14%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 ++N G L RE GL+ + ++ER + V + IE + ++R Y Sbjct: 3 QLEEKNPNERLGDFLARVRESQGLTIEDLSERTKISVKMLHFIESSDWKSLPVEAYVRSY 62 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAA--KVAPMQSFSLGKRRKKRDGWLMTFTWLVLF 122 + S + + + + +L ++ + P+++ + +K+ Sbjct: 63 LNSVSSKLGLDTKAILKMYAEEVGSSYEVREAEPIKNIAPMTEEEKKPR----------- 111 Query: 123 VVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPA 182 + L V S++ A + A Sbjct: 112 --------------------SKAVPIAIVVILVLLVVGLHFVTRENSSSDASANPPSVVA 151 Query: 183 SVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPD--GAAPLPT 240 + D+T N P P + +QA VD A A + ++ Sbjct: 152 AEDSTEVNQDMPEGAIKVPVDSIKDEKNEKVTQAEVDKAVKKAENLPASATIFISSTSKK 211 Query: 241 DQAGVTTPVADPNALVMNFTA----DCWLEVT---DATGKKLFSGMQRKDGNLNLTGQAP 293 D A VT PV+D + W+ + D + + D L T Sbjct: 212 DTATVTGPVSDNGRTRIELVGSGEMRSWVGIKRDEDDDDFVKEANIATVDNKLVYTASGT 271 Query: 294 YKLKIGAPAAV-QIQYQG--KPVDLSRFIRTNQVARLTL 329 + IG P A+ ++ G PV + +F +VAR ++ Sbjct: 272 LYIVIGEPRAIGKMYLNGVETPVPVPKF---GRVARFSV 307 >UniRef50_C2E0V4 Possible transcription regulation protein n=8 Tax=Lactobacillus jensenii RepID=C2E0V4_9LACO Length = 367 Score = 126 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 94/333 (28%), Gaps = 56/333 (16%) Query: 7 HDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIR 66 + G +LR+ARE +GLS V + ++ + IE ++R +IR Sbjct: 11 EQEVIMANIGEKLRSAREAMGLSIADVEKTTKIQSRYLTAIENSDFDKLPGDFYVRAFIR 70 Query: 67 SYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIG 126 YA++V + +ELL + P + S K+ Sbjct: 71 QYAQVVGLDGKELLAEYHQDVPETNSDEYVENSIDNKTEEVKKTTNSKKGML-------- 122 Query: 127 LSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDT 186 + ++ + + + S+ +S A S +S Sbjct: 123 -------------KNQMPRIILGAGVVIVIIYVLITSLFRGSSQQASDAGDSVTVSSQSD 169 Query: 187 TATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVT 246 ++++++ + + V + S + + A T A+ + Sbjct: 170 SSSSSEKASSSTEKSHVKITRLGYGSYQVTGLKSNRNLVIHAGTNNLSASVTVDGETK-- 227 Query: 247 TPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNL---TGQAPYKLKIGAPAA 303 W SG D + + + Sbjct: 228 -----------------W------------SGSISSDSKHTVKIPESAKSVSIYLSNDTG 258 Query: 304 VQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPA 336 ++ GK + + + RLT+ S + Sbjct: 259 TKVTVGGKKIPYTPAGTSLN-LRLTIGKVSSSS 290 >UniRef50_C5SFB6 Transcriptional regulator, XRE family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB6_9CAUL Length = 416 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 93/304 (30%), Gaps = 25/304 (8%) Query: 10 NEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYA 69 ++ T G LR+ RE G S + +A+ ++ S + +EE + F G++++YA Sbjct: 49 SDPETLGNILRSTREAQGFSLEYMADITRVRRSYLEALEEATYDRLPSRAFSIGFVKAYA 108 Query: 70 RLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSG 129 + + + EE L ++ A + L GL+ Sbjct: 109 KALGLDEESLADLFKRSFADPAQSDKLRAPVGAAFEDLRPSYRLYG----------GLAL 158 Query: 130 AWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTAT 189 A + T A + + Q S + T + P Sbjct: 159 ALVLAVVTWNLFQRTPGWGGHHAPSADTTPQKWSPGVPLVRDKLLLTQAAPAPKDQDLPV 218 Query: 190 NTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPV 249 TP + A+D ++ + V A GA P+ + Sbjct: 219 PYYTPGLEEGFAAIDAERAEQNPSATLGVPLQMRKAFNPRGAVFGATPVDSM-------- 270 Query: 250 ADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKI--GAPAAVQIQ 307 + + L +T + F+ L + L I G P A +I Sbjct: 271 -----VTIQAQRSVNLVLTGTDKRVYFARQLGPGEAYRLPQVSAVNLLIEVGDPKAFEIY 325 Query: 308 YQGK 311 Y G+ Sbjct: 326 YNGE 329 >UniRef50_Q0F2U3 Transcriptional regulator, XRE family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2U3_9PROT Length = 335 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 95/328 (28%), Gaps = 42/328 (12%) Query: 9 QNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSY 68 Q G +L AR L A +L L+ + +E + + G++R Y Sbjct: 30 QTLLTDIGNKLTAARLALQEGLDEPARKLKLRRKHLEALESGNWDSMPDDVYAMGFLRQY 89 Query: 69 ARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLS 128 + + + + + L+ A + R+ W + L + ++I + Sbjct: 90 SAYLRLDLTDEVERLKNSAYTLTRPLTFPDPPVAPSRQ-----WAWIASALFIILLIAFN 144 Query: 129 GAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTA 188 + +Q T T+ P + Sbjct: 145 VLY---------------------------QQAPENHSPAVVTMSAPNTAEAPVVESSPP 177 Query: 189 TNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTP 248 T P PA P + APT ATT +P TP Sbjct: 178 AQTTAPISPPAEPASKPDDKTPGETVGIVTEQTTQTAPTVATTRSTTQAIPKPARKTVTP 237 Query: 249 -VADPNALVMNFTADC-WLEVT------DATGKKLFSGMQRKDGNLNLTGQ-APYKLKIG 299 + W++++ D G+ + + ++ +++L + G Sbjct: 238 QPPTTHTYRFEAVGSSVWIQISMPNPAGDGKGRLIKEALLQQGHHISLKQPVDALWITCG 297 Query: 300 APAAVQIQYQGKPV-DLSRFIRTNQVAR 326 +++I GK + D +V R Sbjct: 298 NAPSLRILVDGKLLADTGSLGAGKKVLR 325 >UniRef50_A9BMV4 Putative uncharacterized protein n=3 Tax=Comamonadaceae RepID=A9BMV4_DELAS Length = 343 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 119/334 (35%), Gaps = 10/334 (2%) Query: 4 EATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRG 63 + ++T G LR ARE GLS +A L + + +E D A F+R Sbjct: 13 TQGENAQTSMTAGTLLRQAREAAGLSLAGLAAALKVPAPKLEALEADDYAAFQDHVFMRA 72 Query: 64 YIRSYARLVHIPEEELLPGLEKQAPLRAAKVA-------PMQSFSLGKRRKKRDGWLMTF 116 +S R + + +L L + A +SF R+ Sbjct: 73 LAQSVCRTLRMDSASVLALLPRTQLKSLADDRGSINATFKERSFKATGTSLGRENGSRKV 132 Query: 117 TWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPAT 176 +VL ++ + ++ + EE A ++A + + V PA Sbjct: 133 AIIVLLLLAAAAAVYFLPKHEGDAEEPQAGASDAAALVQPAGTVSEPVAAQEPV--APAA 190 Query: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAA 236 T+ + + A + + A P+ A+ T A PA + A Sbjct: 191 TTPADVPAAPASASASASASASASAPATSAPAAAAVPAPASTTTPAAPAAATVPAANAPA 250 Query: 237 PLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKL 296 + T LVM A W++V D++G+ + ++ G P + Sbjct: 251 DGAAATSAATAAQTPGGVLVMKANAQSWVQVKDSSGRVVLQKTLAAGESIGAEGALPLSV 310 Query: 297 KIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLN 330 +G + +++ +G+ +++++ R N VAR + Sbjct: 311 IVGNASGTEVRVRGELLEVAKTTRDN-VARFEVK 343 >UniRef50_C9YB08 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YB08_9BURK Length = 295 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 96/326 (29%), Gaps = 40/326 (12%) Query: 5 ATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGY 64 T +T G LRNARE GL A+A + + V + +E D+A + F+R Sbjct: 10 ETTLAAAPVTAGRLLRNAREAAGLHIAALAVSMKVPVKKLEALEADRADLLPDAVFVRAL 69 Query: 65 IRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVV 124 S R + + +L L + + + Sbjct: 70 ASSVCRALKVDSAPILELLPQTVKPSFEAGDKGINAPFKVPGE--------------AAS 115 Query: 125 IGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASV 184 +G + + + A + + + ++ P V Sbjct: 116 VGFVDVLKRPVVIVVSLLLLAVLGIAFAPEMHLPDFASKADVTPANIAPLKESAIEPVPV 175 Query: 185 DTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAG 244 P P P+ A A Sbjct: 176 AEKLEEKLPPVEVVP-------------------------GPSPAELVKQPVTEAALPAS 210 Query: 245 VTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAV 304 +V+ W+EV D+TG L + DG + TG +P + +G V Sbjct: 211 SAPVQKPTEMIVIRAKGTTWVEVVDSTGAVLVRRTLQADGITSATGVSPLAVVVGKADMV 270 Query: 305 QIQYQGKPVDLSRFIRTNQVARLTLN 330 ++ +GKP ++S R N VAR + Sbjct: 271 DVEVRGKPFNMSTVSRDN-VARFEVK 295 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.301 0.112 0.266 Lambda K H 0.267 0.0346 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,458,385,231 Number of Sequences: 3077464 Number of extensions: 61094576 Number of successful extensions: 591351 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3686 Number of HSP's successfully gapped in prelim test: 4393 Number of HSP's that attempted gapping in prelim test: 507351 Number of HSP's gapped (non-prelim): 58384 length of query: 337 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 208 effective length of database: 643,403,500 effective search space: 133827928000 effective search space used: 133827928000 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 92 (40.3 bits)