BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (235 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55886 Uncharacterized protein yigA n=156 Tax=Enterobac...   387   e-106
UniRef50_D2TWV4 Putative uncharacterized protein n=1 Tax=Arsenop...   234   2e-60
UniRef50_Q65RL8 Putative uncharacterized protein n=5 Tax=Pasteur...   130   5e-29
UniRef50_D0I355 Putative uncharacterized protein n=1 Tax=Grimont...   106   8e-22
UniRef50_Q1ZLA2 Putative uncharacterized protein n=4 Tax=Photoba...    98   3e-19
UniRef50_A4SRX0 Putative uncharacterized protein n=2 Tax=Aeromon...    96   1e-18
UniRef50_D0Z0U0 Putative uncharacterized protein n=1 Tax=Photoba...    88   2e-16
UniRef50_O31086 Orf235 (Fragment) n=11 Tax=Enterobacteriaceae Re...    86   1e-15
UniRef50_Q48AR7 Putative uncharacterized protein n=1 Tax=Colwell...    84   5e-15
UniRef50_C4LDU7 Putative uncharacterized protein n=1 Tax=Tolumon...    82   2e-14
UniRef50_A8TB79 Site-specific tyrosine recombinase XerC n=56 Tax...    81   2e-14
UniRef50_Q5QUS7 Uncharacterized conserved protein, YigA-like n=2...    81   3e-14
UniRef50_A6F902 Uncharacterized conserved protein, YigA-like pro...    79   1e-13
UniRef50_B5FCQ9 3'-5'-cyclic nucleotide phosphodiesterase n=3 Ta...    78   2e-13
UniRef50_UPI0000E105BC Uncharacterized conserved protein, YigA-l...    74   3e-12
UniRef50_Q21P79 Putative uncharacterized protein n=1 Tax=Sacchar...    73   7e-12
UniRef50_B9ZNC2 Putative phytochrome sensor protein n=1 Tax=Thio...    70   8e-11
UniRef50_O05323 ORF 240 protein n=25 Tax=Pseudomonadaceae RepID=...    68   2e-10
UniRef50_Q1YSU9 Putative uncharacterized protein n=1 Tax=gamma p...    67   4e-10
UniRef50_B7S2B7 Putative uncharacterized protein n=1 Tax=marine ...    67   4e-10
UniRef50_B5JX80 3',5'-cyclic-nucleotide phosphodiesterase n=1 Ta...    66   8e-10
UniRef50_A4A9F1 Putative uncharacterized protein n=2 Tax=unclass...    66   1e-09
UniRef50_B3PEI7 Putative uncharacterized protein n=2 Tax=Gammapr...    64   5e-09
UniRef50_B4S2D8 Uncharacterized conserved protein, YigA-like pro...    63   1e-08
UniRef50_Q1N420 Putative uncharacterized protein n=1 Tax=Bermane...    62   1e-08
UniRef50_C5S7I3 Putative uncharacterized protein n=1 Tax=Allochr...    60   5e-08
UniRef50_Q2SQ63 Uncharacterized protein conserved in bacteria n=...    60   6e-08
UniRef50_C7HXH1 Putative uncharacterized protein n=1 Tax=Thiomon...    60   8e-08
UniRef50_A4BTZ4 Putative uncharacterized protein n=1 Tax=Nitroco...    59   2e-07
UniRef50_B8KSV2 Putative uncharacterized protein n=1 Tax=gamma p...    59   2e-07
UniRef50_Q3JEA1 Putative uncharacterized protein n=2 Tax=Nitroso...    57   5e-07
UniRef50_Q088K7 Putative uncharacterized protein n=21 Tax=Shewan...    57   5e-07
UniRef50_A7BTH8 Protein containing DUF484 n=1 Tax=Beggiatoa sp. ...    57   6e-07
UniRef50_Q2BRF9 Putative uncharacterized protein n=1 Tax=Neptuni...    57   6e-07
UniRef50_C7R6T1 Putative uncharacterized protein n=1 Tax=Kangiel...    56   8e-07
UniRef50_B8GT90 Putative phytochrome sensor protein n=1 Tax=Thio...    56   1e-06
UniRef50_A1TXX8 Putative uncharacterized protein n=3 Tax=Marinob...    55   1e-06
UniRef50_A6W1A9 Putative uncharacterized protein n=1 Tax=Marinom...    55   2e-06
UniRef50_Q1QSV0 Putative uncharacterized protein n=1 Tax=Chromoh...    53   7e-06
UniRef50_Q0AFS2 Putative uncharacterized protein n=2 Tax=Nitroso...    51   2e-05
UniRef50_C1D8P9 DUF484 domain containing protein n=1 Tax=Laribac...    51   3e-05
UniRef50_Q60AJ3 Putative uncharacterized protein n=1 Tax=Methylo...    51   3e-05
UniRef50_C3X4I5 Putative uncharacterized protein n=2 Tax=Oxaloba...    50   5e-05
UniRef50_Q3IDS1 Putative uncharacterized protein n=2 Tax=Alterom...    49   1e-04
UniRef50_C6WT35 Putative uncharacterized protein n=1 Tax=Methylo...    47   5e-04
UniRef50_A3YDJ8 Putative uncharacterized protein n=1 Tax=Marinom...    45   0.001
UniRef50_A6T2Z5 Uncharacterized conserved protein n=72 Tax=Burkh...    45   0.002
UniRef50_A0Y9E1 Putative uncharacterized protein n=1 Tax=marine ...    45   0.003
UniRef50_Q2Y5Y9 Putative uncharacterized protein n=1 Tax=Nitroso...    45   0.003
UniRef50_Q1H4W9 Putative uncharacterized protein n=2 Tax=Methylo...    44   0.006
UniRef50_A0Z3C5 Putative uncharacterized protein n=1 Tax=marine ...    43   0.008
UniRef50_C7RPB7 Putative uncharacterized protein n=1 Tax=Candida...    42   0.012
UniRef50_A1WWB4 Putative uncharacterized protein n=1 Tax=Halorho...    41   0.037
UniRef50_C5V603 Putative uncharacterized protein n=2 Tax=Gallion...    40   0.045
UniRef50_Q47JM9 Putative uncharacterized protein n=2 Tax=Betapro...    40   0.068
UniRef50_C6MFM7 Putative uncharacterized protein n=1 Tax=Nitroso...    40   0.069

>UniRef50_P55886 Uncharacterized protein yigA n=156 Tax=Enterobacteriaceae
           RepID=YIGA_SALTY
          Length = 235

 Score =  387 bits (993), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/235 (85%), Positives = 216/235 (91%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           MKQP EELQETLTELDDRAVVDYL  +PEFFIRNA AVEA+RVPHPVRGTVSLVEWHMAR
Sbjct: 1   MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMAR 60

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
           ARNHI+VLEENM LLMEQA ANE LFYRLL+LQ  L AA SLD+ML+RFHRWARDLGLAG
Sbjct: 61  ARNHINVLEENMTLLMEQAHANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAG 120

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           A+LRLFPDRWRLGAPS +THLAL+RQ+FEPLRIQRLGQ QHYLGPLNGPELLVVLPEAKA
Sbjct: 121 ATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQHYLGPLNGPELLVVLPEAKA 180

Query: 181 VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           VGSVAMSM+GSD  LGV+LF+SRD  HYQ GQGTQLL EIALMLPELLERWI+RV
Sbjct: 181 VGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV 235


>UniRef50_D2TWV4 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae
           RepID=D2TWV4_9ENTR
          Length = 251

 Score =  234 bits (597), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/220 (54%), Positives = 155/220 (70%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LDD+ VV+YL  NP FFIRNA AVE +RVPHPV   VSLVEW M R R  I  LE++M L
Sbjct: 31  LDDQTVVEYLKSNPHFFIRNAAAVEQMRVPHPVHHAVSLVEWSMKRQRVCIQNLEQDMQL 90

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGA 134
           L+EQA  NE LF RLL L   L+ A    D   R + W+R  GL+GA +RLF D W+LG 
Sbjct: 91  LVEQARNNEILFNRLLKLVIQLSTADDFADFQQRLYAWSRSFGLSGAYIRLFSDCWQLGV 150

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
           P +   + +SRQ+FEP+RIQR G + HYLG LN PE+L+++P+A  VGSVA+S+LG   +
Sbjct: 151 PMDAQKVMISRQAFEPVRIQRFGGKNHYLGTLNNPEILLLMPDANHVGSVAVSLLGLYGN 210

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           LG+V+F+SRD  HYQ+G GT +L  +A +LP+LL RW+ R
Sbjct: 211 LGMVIFSSRDIQHYQKGMGTTMLDHLAKLLPDLLLRWVTR 250


>UniRef50_Q65RL8 Putative uncharacterized protein n=5 Tax=Pasteurellaceae
           RepID=Q65RL8_MANSM
          Length = 237

 Score =  130 bits (326), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLM 76
           D  VV +L  NP+FF+++   ++ + +PH  +GT+SLVE  + R R  I  LE  +AL  
Sbjct: 11  DELVVKHLKANPQFFVQHIDLLDQLIIPHAQKGTLSLVEMQLERQRERIKELEAELALFA 70

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPS 136
           + A   + +F  L+ LQ+ L    +  + +   ++WAR+  L  A + LF D W+   PS
Sbjct: 71  DLAHQQQDIFLALMPLQKRLAQCKNFPEGVEEINKWARNFELQQAKILLFNDCWQ-KNPS 129

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPL-NGPELLVVLPEAKAVGSVAMSMLGSDAD- 194
                 + R+ FE +R++R+G    YLG L N  + L+ LPE   VGS+A  +LG   + 
Sbjct: 130 VGEEFWIDRKGFELIRLERIGLRHFYLGELTNKEKSLLFLPEELPVGSIACCLLGMKKNQ 189

Query: 195 ---LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                ++LF++RD +H+  GQ T  L  +  ++   L RW+
Sbjct: 190 HKSTALLLFSARDTAHFHNGQDTAFLKHLVSIVELHLHRWL 230


>UniRef50_D0I355 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP
           101886 RepID=D0I355_VIBHO
          Length = 224

 Score =  106 bits (264), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L D +V  +L  NP+FF R  R    +R+PH  RG VSLVE  + R R  +  LEE +  
Sbjct: 15  LTDESVAAFLTDNPDFFCRQPRLAVQLRIPHAERGAVSLVEIQLDRLRERVAALEEEITQ 74

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGA 134
           LM  A  NE LF       ++L AA S DD+       A  L L+  SLRL+  R     
Sbjct: 75  LMGIAAGNENLFRAFSLAHQALFAAESEDDIHQVLCTLAGALNLS-VSLRLYESR----- 128

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
              HT   L+R+S + ++      ++ YLG L   +    + +A  +GS A+  +  D +
Sbjct: 129 --RHT---LNRKSVDAVKAAHFCGQRIYLGRLRKVDGDQFVSQAPELGSYALVPVVKDKE 183

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           LG + F S D  H+Q    T  + +IA  +  LL +W E
Sbjct: 184 LGFLSFASPDGGHFQPSMDTLFVEQIAEHIAILLTKWQE 222


>UniRef50_Q1ZLA2 Putative uncharacterized protein n=4 Tax=Photobacterium
           RepID=Q1ZLA2_PHOAS
          Length = 234

 Score = 97.8 bits (242), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 106/227 (46%), Gaps = 12/227 (5%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
           G++L E L E   +AVV YL  NP FF R +  +  +R+PH  RGTVSLV+  + R R  
Sbjct: 12  GDDLNEVLNE---QAVVTYLRNNPTFFSRQSEWLSDVRIPHQERGTVSLVDIQLERLRLR 68

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLR 124
           I  LE+  A L+  A  +  L       Q  L    ++  +L      A  L L+   LR
Sbjct: 69  IAELEQQHATLLANATKSGELSVLFSNAQVQLLQCHNIYQVLTIIDALAAQLDLS-VCLR 127

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSV 184
           LF    +L        L L R+ F      RL Q++ YLG L  PE  ++      +GS 
Sbjct: 128 LFDSEDKL--------LYLERRQFNDFYRSRLTQDRPYLGRLRRPEAELLYTHPPQLGSF 179

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +  LG  A  GV+ F S D  H+Q    T  + ++A  +  L+E W
Sbjct: 180 IVLPLGRSAANGVLSFASADGGHFQPEMDTLFVEQLATTISYLIEHW 226


>UniRef50_A4SRX0 Putative uncharacterized protein n=2 Tax=Aeromonas
           RepID=A4SRX0_AERS4
          Length = 226

 Score = 95.5 bits (236), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 98/195 (50%), Gaps = 6/195 (3%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +D+  V++YL + PEFF R+A  ++ IR+PH  +G+VSLVE  M R R  I  LE+ +  
Sbjct: 11  VDEATVLEYLARYPEFFQRHAAMLDRIRIPHERKGSVSLVERQMDRQRERIEQLEQEITE 70

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWRLG 133
           LM  A  NE +F     L   L    SL ++     + + + L L G  L L P +++L 
Sbjct: 71  LMGIASENERIFRVYADLYGELYGCQSLFEVSAVMGKAFVQRLRLTGLRLWLSPKKFQLS 130

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
            P          +  E L  QRL  + +Y G LN  E   +      V SVA+  LG   
Sbjct: 131 GP--ELRFMADGKQLEQLLGQRLPGQDYYFGRLNQSEKQALFGHDVLVNSVALMRLG--- 185

Query: 194 DLGVVLFTSRDASHY 208
           DLGV+ F S D SH+
Sbjct: 186 DLGVLAFASSDPSHF 200


>UniRef50_D0Z0U0 Putative uncharacterized protein n=1 Tax=Photobacterium damselae
           subsp. damselae CIP 102761 RepID=D0Z0U0_LISDA
          Length = 240

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)

Query: 9   QETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVL 68
           Q +  EL    V  YL K P+FF R+   +  IRV H  RG VSLV+  + + R  +  L
Sbjct: 10  QASCDELSAEQVASYLRKEPDFFARHPELLSQIRVHHDERGAVSLVDIQLEKLRGQVTQL 69

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLF-- 126
           ++ +  L +QA  N+ LF +   LQ  L  A  L  ++    ++A+   L   S+RL   
Sbjct: 70  QDQLEQLTDQAKRNDQLFQQFSSLQAKLMQARCLQQVMPLMEQFAQQYQL-NISIRLLAE 128

Query: 127 PDRWRLGAPSNHTHLA-LSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
           P+  +      ++ +A L R+SF   +   + Q+  YLG L   +  +   +   +GS A
Sbjct: 129 PEAAKPLLKEINSDVAWLLRESFTQFQRSFMPQQNIYLGRLRHGQAALFFSQPPDLGSFA 188

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           +  L     LGV+ F+S +  H+     T  L ++A+++   L  W++
Sbjct: 189 LLPLKQHQTLGVLGFSSTEGGHFHPAMDTLFLQQLAIVMSSQLALWLD 236


>UniRef50_O31086 Orf235 (Fragment) n=11 Tax=Enterobacteriaceae RepID=O31086_SERMA
          Length = 63

 Score = 85.5 bits (210), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 3/62 (4%)

Query: 176 PEAKAVG---SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           P+AK +G   SVA+SMLG D +LG+V+F+SRD  HYQQG GT +L+++A MLPELLERWI
Sbjct: 1   PQAKQIGQIGSVALSMLGDDGELGMVIFSSRDTQHYQQGMGTVMLNQLARMLPELLERWI 60

Query: 233 ER 234
           ER
Sbjct: 61  ER 62


>UniRef50_Q48AR7 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q48AR7_COLP3
          Length = 230

 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 12/222 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L D  VV YL  NPEFF RN   +  +R+    RGTVSLVE    + R  ++ LE+ +  
Sbjct: 15  LTDELVVSYLQDNPEFFNRNNSLMTGLRLNDEQRGTVSLVERQQQQLRQKVYGLEDEITQ 74

Query: 75  LMEQAIANEGLF--YRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRL 132
           LM  A  NE LF  Y  LYL+  L    S +++L   H+   +L L+ +S +L    W +
Sbjct: 75  LMSVANHNEQLFVLYSDLYLR--LLDCQSAEELLDCLHQATTEL-LSLSSFKL----WLV 127

Query: 133 -GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
            G  +   H +LS      +   RL  +++Y G L   E  ++  +   +GSV +  L  
Sbjct: 128 SGNNTEVAHHSLSTNDCAGVMQNRLTNDEYYFGRLQESEQTLIFSKP-CLGSVVLIKLTH 186

Query: 192 DAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           D   +G +   S DA H+     T LL++   ++ +LL + +
Sbjct: 187 DEQAVGFLAIGSEDAHHFDPRMDTLLLNQFKRLVAKLLHQQL 228


>UniRef50_C4LDU7 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187
           RepID=C4LDU7_TOLAT
          Length = 228

 Score = 81.6 bits (200), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 5/217 (2%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L++  + DYL ++P+FF+R+   +E I VPH  RGTVSL +  + R R  +  LE+    
Sbjct: 8   LEENRIADYLKQHPDFFLRHKELLEEIAVPHEQRGTVSLFDVKLERQRERLQQLEDERQE 67

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGA 134
           L+  A  NE +F     +  +L A +S+  +    H   R+  L   +  L+ ++ R+ A
Sbjct: 68  LLANATRNEFIFRVYTDVYPALFACTSMRQLWKCLHSTFRE-RLRIPACALWVNQARVKA 126

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
                   +    F+ L +  +  +  Y G +N  +  ++  +   V S+A+  LG   +
Sbjct: 127 KRFDKPYEMEYPLFQRLCLYPMADQLVYFGRVNDCDRELIFGQGSLVHSMALLRLGEYGE 186

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHE----IALMLPEL 227
            G + F   +  HYQ G  + LL +    + L+LP L
Sbjct: 187 WGFLAFGHANPQHYQPGMDSLLLEQLGRFVTLLLPTL 223


>UniRef50_A8TB79 Site-specific tyrosine recombinase XerC n=56 Tax=Vibrionales
           RepID=A8TB79_9VIBR
          Length = 243

 Score = 81.3 bits (199), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 16/234 (6%)

Query: 6   EELQETLTELDDRA-----VVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           E+ +  L+E++  A     V  YL  +P+F ++    V+ + VPH   GTVSLV   M R
Sbjct: 4   EDQKTQLSEVEANALTAEVVAQYLKDHPDFLVQRPELVDRLSVPHTDSGTVSLVHVQMNR 63

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
            R  I  LEE +  LM  A  N+  FY  + LQ  +   +    ++      A +LGL  
Sbjct: 64  QRQRIEDLEEEITTLMSMAANNDRTFYEFMDLQGEVLKCNDFQQVINAIEVKAENLGLK- 122

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLN--GPELLVVLPEA 178
           A +RL  ++     P       LS+++++      L  +  YLG L     E L    + 
Sbjct: 123 AYVRLL-NQCDAATP-------LSKENYQRFATNHLNGKPAYLGRLRKVDREALFEGMDV 174

Query: 179 KAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
             +GS  +  L     LGV+ F+S D  H+Q    T  L  ++L++  L +  +
Sbjct: 175 PEMGSYVVLPLVKKQTLGVLAFSSEDGGHFQPDMDTLFLRHLSLVVAHLAQTLV 228


>UniRef50_Q5QUS7 Uncharacterized conserved protein, YigA-like n=2 Tax=Idiomarina
           RepID=Q5QUS7_IDILO
          Length = 231

 Score = 80.9 bits (198), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LDD  + +YL +NP+FF RN   +  ++  H  +G VSL+E    + R  +  LEE +  
Sbjct: 13  LDDSLIREYLQENPDFFTRNDDLLAQLQFQHSEKGAVSLIERQQQKLRLRVQQLEEEITE 72

Query: 75  LMEQAIANEGLF--YRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWR 131
           LM  A  NE +F  Y  LY+  SL    SL  +L      +  +L +   SL+ F     
Sbjct: 73  LMINARRNEAIFSAYSNLYV--SLLRCQSLSQVLDELQNTFENELEMPALSLKFFDSPVD 130

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
           LG        + +  + + L  +R  +   YLG L   E  ++  + + + SVA+ +LG 
Sbjct: 131 LG-----EQYSFASDTHKKLLSKRFNESSIYLGRLTEQEHKLLFQD-EEIASVALLLLGD 184

Query: 192 DADLGVVLFTSRDASHYQ 209
           + +LG++   + +ASH++
Sbjct: 185 NGELGMLAVGNTNASHFE 202


>UniRef50_A6F902 Uncharacterized conserved protein, YigA-like protein n=1
           Tax=Moritella sp. PE36 RepID=A6F902_9GAMM
          Length = 241

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 7/219 (3%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           + ++ V+ +L  +P+FF+RN   V+ + + H  +G VSLV   + R R  I  LE  +  
Sbjct: 16  ISEQNVIAFLQADPDFFVRNNDLVDTLAISHGAQGCVSLVTLRLERQRQRIADLELQLQQ 75

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWRLG 133
           L+  A  N+ LF     +  +L   +S+  M  +   +    L LA  +L L    + L 
Sbjct: 76  LVAIAADNDKLFRIYADIYTALFNCTSVMQMQRILVTQIQSQLPLAAVNLHLNEAYFHL- 134

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
             S +  LA+S      +R ++     HY GP+   +  ++  +   V S+A+  LG   
Sbjct: 135 -KSQYLPLAISAGQLVRIRQKQFAGGDHYFGPVTSADKALLFGQDALVNSMALMALGERG 193

Query: 194 DLGVVLFTSRDASHYQQGQGT----QLLHEIALMLPELL 228
           + G++   S +A HYQ G       QL   I+ +LP+L+
Sbjct: 194 EYGLLAIGSANADHYQAGMDNLLLGQLCRIISTLLPQLM 232


>UniRef50_B5FCQ9 3'-5'-cyclic nucleotide phosphodiesterase n=3 Tax=Aliivibrio
           RepID=B5FCQ9_VIBFM
          Length = 234

 Score = 78.2 bits (191), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 6   EELQETL--TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARN 63
           E+ QE +  TEL +  V  +L  +P+FF ++   +  I+V  P RG VSLVE  + + R 
Sbjct: 3   EKQQEYIEPTELTEDIVAQFLTDHPDFFQKHPELLNRIKVDTPERGVVSLVEVQVNKLRG 62

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASL 123
            I  LEE +  LM  A  N+ LF+    +Q+ L  + +    +    + A +L L  A +
Sbjct: 63  RIGELEEEITQLMSLAAQNDRLFHEFSSIQKQLLLSENFSQAVAIIEKKAIELNLT-AHI 121

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP------E 177
           ++           +H    + + + +    + L     YLG L   +   +         
Sbjct: 122 KI--------VEHSHPKYHVEQSALDNFVKKFLNGHSAYLGRLRKTDRDSLFAYGGLDLS 173

Query: 178 AKAVGSVAMSMLGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +  +GS A+  LG+ +  +G++ F SRD  H+Q   GT  L ++  +   LL +W
Sbjct: 174 SSDLGSFAILPLGASSKPMGIIAFASRDGGHFQPNMGTLFLEQLVSVFHYLLTQW 228


>UniRef50_UPI0000E105BC Uncharacterized conserved protein, YigA-like n=1
           Tax=Rhodobacterales bacterium HTCC2255
           RepID=UPI0000E105BC
          Length = 221

 Score = 74.3 bits (181), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M QP  +  +TL+    + V  YL  N EFF+        + +PH  RGTVSLVE    +
Sbjct: 1   MTQP--DFSQTLSA---KEVAQYLRDNEEFFVEYPELTAELIIPHQQRGTVSLVELQAEQ 55

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLA 119
            R  +H   + +A L+  A  NE LF     L + L    +L D+    H  +  +L LA
Sbjct: 56  LRKQLHSQRQELAALIRNADNNEQLFQIYAQLLQRLYTCDTLVDVEAALHACFHGELALA 115

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
              ++LF    R     +H            L  +R  Q   + G L+  E   +  E  
Sbjct: 116 EVCVQLFIKETRFADFKHHA-----------LIDKRFKQSDFFFGRLSQNETKQIFNEG- 163

Query: 180 AVGSVAMSMLGSDADLGVVLFTSRDASHYQ 209
           +V S A+ +LG+    G +   S  A+H+Q
Sbjct: 164 SVESCALMLLGAKEPFGFLAVGSASATHFQ 193


>UniRef50_Q21P79 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans
           2-40 RepID=Q21P79_SACD2
          Length = 227

 Score = 73.2 bits (178), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 17/227 (7%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           + D+ V +YL +NP+FF++++R +  + +PH     VSLVE  ++  R+    + + ++ 
Sbjct: 8   ITDQRVAEYLAENPDFFVKHSRLLGELELPHDSGKAVSLVERQVSVLRDRNMDMRQRLSN 67

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWRLG 133
           L++ A  N+ LF +   L  +L   + L D++   ++ + ++  +    L +F       
Sbjct: 68  LLDNARENDRLFEKSKRLVLALLECNDLGDLVDALYYSFDKEFNIQHTRLIIF------- 120

Query: 134 APSNHTHLALSRQSFEPLRI------QRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAM 186
              NH  +  +    E L +      +R+   +   G +   E   +   +A  +GS AM
Sbjct: 121 --GNHQTVPSTAARIENLHVARDVIGRRIKSPKAVSGGIKDDECKFLFDKDAPHIGSAAM 178

Query: 187 SMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           S+L     LGV+   + D   Y  G GT  L  IA +L  LL ++I+
Sbjct: 179 SVLIHSKPLGVLAIGNEDPKFYHSGMGTIFLGYIAEVLNRLLPKYIK 225


>UniRef50_B9ZNC2 Putative phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZNC2_9GAMM
          Length = 245

 Score = 69.7 bits (169), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 10/215 (4%)

Query: 23  YLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIAN 82
           YL  +P+FF  +   ++ +R+PHP  G VSL+E  +   R     +E++M  L+E+A  N
Sbjct: 35  YLRDHPDFFQDHLPLLDILRLPHPAGGAVSLLERQVTLLREKHRAMEQHMGELVERARDN 94

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTHL 141
           E +   L  L ++L  A +LD +L       R+ LG    S+RL  DR        H   
Sbjct: 95  ERMGQHLHELAKTLMRAENLDAVLALTQDALRNELGAERVSIRL-ADRE---VDDLHALE 150

Query: 142 ALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD-LGVVLF 200
           +    +F+PL      + +   G + G  L V+   A  +GS  +  LG ++D +GV+  
Sbjct: 151 SSELSTFDPL----FARGKAQCGRVPGEMLDVLFDSADGIGSAILMPLGDESDRIGVLGL 206

Query: 201 TSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
            S     +Q   GT  +  I  +L E +   +ER 
Sbjct: 207 ASDSVDRFQPDMGTYFVTHIGDLLAESIRCHVERT 241


>UniRef50_O05323 ORF 240 protein n=25 Tax=Pseudomonadaceae RepID=O05323_PSEFL
          Length = 240

 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 21/236 (8%)

Query: 4   PGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARN 63
           P  +  E+ +  +  AV  YL  +P+FF+ +   +  +R+PH    TVSLVE  M   R 
Sbjct: 8   PAPQPDESPSLPETAAVAAYLEAHPDFFVEHEELLATMRIPHRRGDTVSLVEHQMKILRE 67

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGAS 122
               +   ++ LM+ A  N+ LF +   L  +L  AS+L+D++M      R D  +   S
Sbjct: 68  RNIEMRHRLSHLMDVARDNDRLFDKTRRLILALMDASTLEDLVMSVEDSLRQDFQVPFVS 127

Query: 123 LRLFPD------RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP 176
           L LF D      RW   A +      L            L +++   G L   EL  +  
Sbjct: 128 LILFGDNAMPVGRWVTHAEAQTAIGGL------------LTEDKSVSGSLREHELDFLFG 175

Query: 177 EA--KAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           E   K +GS A+  +      GV+   SRD  HY+   GT  L  IA +   +L R
Sbjct: 176 EEQRKQIGSTAVVAIAHQGLHGVLAIASRDPQHYKSSVGTLFLSYIAEVTGRVLPR 231


>UniRef50_Q1YSU9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium
           HTCC2207 RepID=Q1YSU9_9GAMM
          Length = 228

 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 9/225 (4%)

Query: 9   QETLTELD--DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
            E  TE+D  ++ V ++L  NP+F  +N   +E + +PH     VSLVE  +   R+   
Sbjct: 3   NEIETEVDPIEKVVGEFLRDNPDFLDKNTDILETMVLPHISGKAVSLVERQVGVMRDRNR 62

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRL 125
            +   +  +++ A  N+ LF +   L  +L  A +L  ++   +    +D G+   SL L
Sbjct: 63  EMRSRLENILQTAKDNDLLFEKTKRLVLNLLEAKTLGALVEAVYDSLGKDHGIEFYSLTL 122

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRL-GQEQHYLGPLNGPELLVVLPE-AKAVGS 183
           F D  +L  P     +A + ++ E  R+  L G  +   G L   E++ +  E  + VGS
Sbjct: 123 FGDEKKL--PRTMARIASTEKANE--RVGTLIGANRAVCGILREDEMVFLFGERGRQVGS 178

Query: 184 VAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           VA   L  D+  G++   + D + Y+   GT  L  IA +L  +L
Sbjct: 179 VAAVPLRYDSLYGILAVGNSDPNFYKSSMGTLFLSYIAEILNRVL 223


>UniRef50_B7S2B7 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S2B7_9GAMM
          Length = 228

 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 8/218 (3%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
           TEL D  V +YL  N +F  RN   ++ + + H     VSLVE  ++  R     +   +
Sbjct: 13  TELSDEQVREYLKLNGDFLQRNPDMLDHLHISHASGSAVSLVEKQVSVLRERNIDMRHRL 72

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
             L   A  N+ L+ +   L  +L  A +LD +   F     +D  +  ASL LF     
Sbjct: 73  NALTANARDNDKLYEQTRKLVLALLDARNLDSVYSAFMDAMEKDFKVDYASLILF----- 127

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQ-EQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
            G PS+     +       + I  L +  +   G L   EL  + P+A  VGS A+  L 
Sbjct: 128 -GEPSSDGKCRVETSEAAKIEIGALLKGRKPVCGVLRKEELAYLFPDAGEVGSAALMPLA 186

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           +  +LG++   S DA+ Y    GT  L  IA ++  LL
Sbjct: 187 NGEELGLIAVGSADANRYGSSMGTLFLTHIADVIVRLL 224


>UniRef50_B5JX80 3',5'-cyclic-nucleotide phosphodiesterase n=1 Tax=gamma
           proteobacterium HTCC5015 RepID=B5JX80_9GAMM
          Length = 226

 Score = 66.2 bits (160), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 16/229 (6%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
           +T T LDD+ V  YL  +P+FF ++   +  +RVPHP    +SLVE  +   R     LE
Sbjct: 8   KTATTLDDKTVASYLKDHPDFFDKHLDLLALLRVPHPSGDAISLVERQIDLLRQQNRGLE 67

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPD 128
           + +  L+  A  N+ +   L  L + L  A SL D +       R+  GL  A L  +  
Sbjct: 68  DKLMELVNIARDNQRVTDHLHTLAKELVEADSLSDAVTATRDVLREQFGLEVAQLHFYE- 126

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG---PEL--LVVLPEAKAVGS 183
                  SNHT   +S+      RI   G+      P+ G   P+   +V   E   V S
Sbjct: 127 -----GVSNHTEATISQNQ----RIAHFGEISQERRPICGHVTPQQRDIVFGEERFQVKS 177

Query: 184 VAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            A+  L    ++G++   S D + +    G   L +++ ++   + R +
Sbjct: 178 AALVPLYQGENIGILALGSSDEARFHPSMGVFFLSQLSALVSSSIARHL 226


>UniRef50_A4A9F1 Putative uncharacterized protein n=2 Tax=unclassified
           Gammaproteobacteria RepID=A4A9F1_9GAMM
          Length = 218

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 14/222 (6%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +D+  + D+L++NP++F +N   +  I VPH     VSLVE  ++  R+    L   +  
Sbjct: 1   MDEDDIRDFLVQNPDYFQKNPELLGLIEVPHASGAAVSLVERQVSVLRDRNVDLRHRLRD 60

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLFPDRWRLG 133
           L   A  N+ +F     L   L  A +++++     R  RD+  +  ASL LF +     
Sbjct: 61  LGSTAKDNDQMFADTRQLVLGLLPAKTVEELEGALIRVLRDIFDIEYASLTLFEEAAE-- 118

Query: 134 APSNHTHLALSRQSFEPLRIQRLG----QEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
                 H    R+  E     +LG    +     G L   +   + P A  VGS A++++
Sbjct: 119 ------HAGAVRRVPESQLKGKLGGLLVRGNAGCGALRADDFEFLFPGATLVGSAAIALI 172

Query: 190 GSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            S+   LG +   S DA HY    GT  L   A ++  LL+R
Sbjct: 173 ESNGKALGALAVGSSDAGHYDSDMGTLFLEFAAEVIAGLLQR 214


>UniRef50_B3PEI7 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria
           RepID=B3PEI7_CELJU
          Length = 231

 Score = 63.5 bits (153), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L+   V  YL  +P+FF ++   +  + +PH     VSLVE  +A  R     +   ++ 
Sbjct: 13  LEPEQVAAYLQAHPDFFAQHPELLAELSLPHESGAAVSLVERQVAILRERNMDMRHRLSK 72

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLF--PDRWR 131
           L++ A  N+ LF +   L  SL     + D+L   ++ + +D G+   S+ LF  PD+  
Sbjct: 73  LLDNARENDKLFDKTKRLVLSLLEGQDMGDVLDALYYSFDKDFGIHFTSVLLFGNPDKI- 131

Query: 132 LGAPSNHTHLAL---SRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMS 187
              PS+   +     +R+   PL    +   +   G L   EL  +    A  +GSVA  
Sbjct: 132 ---PSSQARIVSMGEAREHIAPL----IKNSRAMCGTLGSAELAFIFGAHAGEIGSVATV 184

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            L   +  G++   +RD  +Y+   GT  L  IA +L  LL   + R
Sbjct: 185 PLMHGSAFGLLAIGNRDPHYYRSSMGTLFLGYIAEVLNRLLPPHLPR 231


>UniRef50_B4S2D8 Uncharacterized conserved protein, YigA-like protein n=3
           Tax=Alteromonadales RepID=B4S2D8_ALTMD
          Length = 231

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 20/223 (8%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEE 70
           TL+  D  A   +L++NPEFF +    +E I++PH  +G+VSLVE    + R  +  L  
Sbjct: 22  TLSSTDVHA---FLLENPEFFAQYPDLLEKIKLPHEHKGSVSLVEIQSDQLRQKVRQLNF 78

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDR 129
            +  L+  A  NE ++     L   L    S+ ++        ++ L L+ A ++ F   
Sbjct: 79  KLNQLVTIAKQNEKIYRVYTDLNVQLLRCESVAEVQFTLEDVLQERLQLSSAVIKSF--- 135

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
                P  H    L ++ F     +R      + G L+  E  ++  E+ A  SVA+ +L
Sbjct: 136 ---KGP--HAIPELQQRLFTE---KRFKNTNFFFGRLSQHERQLLFGESPA-ESVALMLL 186

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHE----IALMLPELL 228
           G + DLG++  +S DASH+     T LL +    + ++LPE++
Sbjct: 187 GDNRDLGILGISSSDASHFTPDMDTLLLQQLQQVLNIILPEMM 229


>UniRef50_Q1N420 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri
           RepID=Q1N420_9GAMM
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 11/215 (5%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV 67
           +Q+   +L ++ V  +L ++P+FF +     E + +PH   G VSLVE+     +     
Sbjct: 1   MQQDEKQLSEKEVAAFLKQHPDFFRKFPDLTEQLDIPHDTGGAVSLVEYQSRLLKEKNTE 60

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLF 126
           L   +  L+E A  N+ LF +   L   L  A S++++        R + G+  A + LF
Sbjct: 61  LHSRLQQLIENARRNDRLFEQTRRLTLDLLDAQSIEEVEQSLQDSMRVVYGVDYACITLF 120

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAM 186
                + A    T + +  Q      +Q  G++Q   G L+  E+ +   E   VGS+A 
Sbjct: 121 VPAMSMQAV---TEVEMQHQ-----LLQHFGRKQAICGQLSDEEMELFFHEDNKVGSMAA 172

Query: 187 SMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
            +L +  DLG++    R   +++    T  L  +A
Sbjct: 173 CLLKN--DLGILSLGHRSEEYFKSNMDTLFLDYVA 205


>UniRef50_C5S7I3 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM
           180 RepID=C5S7I3_CHRVI
          Length = 230

 Score = 60.5 bits (145), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 15/231 (6%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M Q    L E L    +R VVDYL+ +P+F  R+   + AI VPH ++G VSL+E+ +  
Sbjct: 1   MHQAEHSLDEALDP--ERQVVDYLMAHPDFLARHPEVLSAIEVPHGIQGAVSLIEYQVRL 58

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRL--LYLQRSLTAASSLDDMLMRFHRWARDLGL 118
            R  +      +  L+ +A  NE L  RL  L LQ  +         L+R     R+   
Sbjct: 59  LRRQLATERNRLVHLIARARRNEALAIRLHGLILQLMVVKDPEHLCHLLR-ETLLREFHA 117

Query: 119 AGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE- 177
              + +LF        P  H  +A +   F       + +     GPL+    + +  E 
Sbjct: 118 EALAFKLFARATLESRP--HDPVANAFADF-------IDRRNALCGPLSSERAVALFGEG 168

Query: 178 AKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
              + S A+  + +D   G++   S DA+ +    GT  L+ +  ++ + L
Sbjct: 169 GTGIHSAAIVPIHADGQSGIIAIGSADATRFSPEMGTDFLNRLGEIISQKL 219


>UniRef50_Q2SQ63 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SQ63_HAHCH
          Length = 243

 Score = 60.1 bits (144), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 8/218 (3%)

Query: 19  AVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQ 78
           AVV YL ++P FF+ +   +  IR+PH     +SLVE  ++  R      E  +  L++ 
Sbjct: 18  AVVAYLREHPNFFVEHEELLNEIRLPHRSGAAISLVERQISLFREQRDHYERQLYDLIDT 77

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLGAPSN 137
           A  N+  F +   L  +L  A SLD++++     +  D  +   SL LF +      P +
Sbjct: 78  ARQNDRFFEKSKRLLMNLLEARSLDEVVIVLEDSFTGDFQVDFCSLVLFAEHKDF--PIS 135

Query: 138 HTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA-VGSVAMSMLGSDADLG 196
           +   A   +  + L  + L   +   G L   +L V+ P   A + S A+  L     LG
Sbjct: 136 NVSTASLMECSDALGEELLNSVKAVCGNLEARQLQVLFPHNHADIASCAVIPLRYGDLLG 195

Query: 197 VVLFTSRDASHYQQGQGTQLLHEI----ALMLPELLER 230
           ++   SR+  ++  G G+  L  I    + MLP LL +
Sbjct: 196 MLSIGSRNERYFNTGMGSLFLSYISESLSRMLPPLLAK 233


>UniRef50_C7HXH1 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12
           RepID=C7HXH1_THIIN
          Length = 223

 Score = 59.7 bits (143), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRV--PHPVRGTVSLVEWHMARARNHIHVLEEN 71
           EL +  +  YL  NPEFF R+A  +  +++  PH  R  VSL E  M   R+ +  LE  
Sbjct: 2   ELSEHDLAAYLAANPEFFERHAELLTTVQLQSPHGNRA-VSLQERQMEMLRDKMRTLEHR 60

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLT-----AASSLDDMLMRFHRWARDLGLAGASLRLF 126
           +A +M  A+ NE L  +LL   R +      A   L   L    + A DL +   +L+++
Sbjct: 61  LAAMMRNAVDNETLAGKLLLWARDVMLAQQGAPEQLPQTLQDTLKSAFDLPM--TALKIW 118

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAM 186
           P R    A    T ++   ++F             ++GP  G E    LP+A+   S+A+
Sbjct: 119 PVREAFAALDFATGVSEDAKTFAA------SLAAPFVGPNPGFEAAHWLPDAQMAQSLAL 172

Query: 187 SMLG---SDADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
             L    +   +G+++  S D+  +    GT  L+ I+
Sbjct: 173 VPLQNPHTSMCMGLLVLASPDSQRFTADMGTDFLNHIS 210


>UniRef50_A4BTZ4 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BTZ4_9GAMM
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 28/231 (12%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LD+  + +YL ++P+FF+R       + +PH VR   SL+E+ +   R+    L   +  
Sbjct: 9   LDEILIAEYLRRHPDFFLRQRELAAELHIPHDVRPARSLIEYQVQVLRDETARLRARLDE 68

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDML--------MRFHRWARDLGLAGASLRLF 126
           L+  A +N+ L  +L  L   L  A SL+ +           FH  A  + L  A     
Sbjct: 69  LLRIARSNDRLMRQLHRLTLELLDADSLETVCDALRQSLQQSFHVDAVHIILITA----L 124

Query: 127 PDRWRLGA-PSNHTHLALSRQSFEPLRIQR-LGQEQHYLGPLNGPELLVVLPE-AKAVGS 183
           P +      P +H   A         R+ + LG ++   G LN  ++ +   E A  V S
Sbjct: 125 PAQANASVWPPDHPSAA---------RLAKLLGGDRPICGRLNDEDMRLAFGELATGVKS 175

Query: 184 VAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            A+  L   A  G++   S +  HY+  QGT  L ++      LLER I+R
Sbjct: 176 AALIPLADGATQGLLAIGSHNPKHYRPDQGTIFLRQLG----ALLERAIQR 222


>UniRef50_B8KSV2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium
           NOR51-B RepID=B8KSV2_9GAMM
          Length = 232

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 7/211 (3%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
           T+LD  AV  +L+ NP FF+++   +  + +PH    TVSLVE  ++  R     +   +
Sbjct: 15  TDLDHAAVEAFLLDNPHFFMQHPGVLAELELPHGESSTVSLVERQVSLLRERNIEMRRRL 74

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPD-RWR 131
           A + + A AN+ LF     L  +L     + ++   F     D G++ A    F    W 
Sbjct: 75  AQINQWAKANDVLFAATRTLVLNLLEVRDVGEIKSTF-----DSGISNAFEAQFGALHWL 129

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGS-VAMSMLG 190
             A +    L         L +  +  +Q   G L   E+  +  EAK  GS V   +  
Sbjct: 130 PAAATLDPELNSLDTESSNLILSLVKHQQSLSGVLRAEEMTALFSEAKGEGSGVVTPLRH 189

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
           +D  +GV+   S D + YQ   GT  +  +A
Sbjct: 190 NDEIIGVIAVGSHDTARYQSDDGTLFIDHLA 220


>UniRef50_Q3JEA1 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani
           RepID=Q3JEA1_NITOC
          Length = 244

 Score = 57.0 bits (136), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 14/236 (5%)

Query: 2   KQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARA 61
           K P EE+QE      ++++  YL  +P+FF R+   +  + +PHP    +SLVE  +A  
Sbjct: 12  KTPLEEVQER-----EQSIAKYLQTHPDFFARHPDLLSELTIPHPSGAAISLVERQLALL 66

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRS-LTAASSLDDMLMRFHRWARDLGLAG 120
           R     L+  +  L+E A+ N+ L  ++  L    LTAA+    + + F        +  
Sbjct: 67  RGQNRELKRQLRDLIENAMVNDDLSKKVHKLALGVLTAATPQAAIEVLFSSLQTGFDVDV 126

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLV------V 174
            +LRLF D   L  P+   HL + R S     ++          P+ G  L V       
Sbjct: 127 IALRLFFDGKSLPPPAP-DHLNVMRVSRNAPELEVFASVLKSPQPICG-RLTVEQRDYLF 184

Query: 175 LPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
             EA+   S A+  LG +   G++   S++ + ++   GT  L  + +++   L R
Sbjct: 185 GEEAERAVSCALIPLGEEQRRGMLAMGSQEPNRFRADLGTIFLDYLGVIVERALHR 240


>UniRef50_Q088K7 Putative uncharacterized protein n=21 Tax=Shewanella
           RepID=Q088K7_SHEFN
          Length = 246

 Score = 57.0 bits (136), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 21/218 (9%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
            D+  + +YL+ NP+FF R    + A+RVPH  RG VSLVE      R  +  LEE +  
Sbjct: 47  FDEMLIREYLLDNPDFFNRYPELLVAMRVPHAERGAVSLVERRQELLRQRVSQLEEEITS 106

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDM-LMRFHRWARDLGLAGASLRLFPDRWRLG 133
           LM  A  NE +F     L   + A+  L ++ L+       + G +   L          
Sbjct: 107 LMNIATHNEKIFKFNTELSFKMLASQDLGELRLVLSEGLKNEFGFSHVRL---------- 156

Query: 134 APSNHTHLALSRQSFEPLRIQR-LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSD 192
                  + +     E  +I R   Q  +Y G L   E   +      VGSVA++ L  +
Sbjct: 157 -------ITVHDIDSELAKIWRHRVQSGYYFGRLTQSESKRLF--GSEVGSVALTKLSDE 207

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
               +    S D +H+     + L  ++  +L  +L +
Sbjct: 208 NGQVIFAIASNDPTHFHPDMDSLLFSQLRRLLDHMLPK 245


>UniRef50_A7BTH8 Protein containing DUF484 n=1 Tax=Beggiatoa sp. PS
           RepID=A7BTH8_9GAMM
          Length = 240

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 22/245 (8%)

Query: 1   MKQPGEELQETLT-----ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVE 55
           +K P +  Q+T T     ++ ++ VV+YL + P+F  ++   +  + +P      VSLVE
Sbjct: 2   IKTPSKNFQQTKTSQQTEQISEQTVVEYLKQFPDFLTQHDELLAVMEIPSDSSKAVSLVE 61

Query: 56  WHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMR-FHRWAR 114
             +   R     L+     L+  A  N  L  R+ +L  +LT    +++     +     
Sbjct: 62  RKLEGLREENQQLQAKWEGLVAIAEQNAQLNQRIQHLVATLTNVEGIEEFFQTLYSTLCN 121

Query: 115 DLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQ-------RLGQEQHYLGPLN 167
           +       +R F        P  H+ +A+SRQ F     Q        L   +   G L+
Sbjct: 122 EFNTDTVVIRWFE------LP--HSPIAVSRQEFIEYDAQVFTLFDSVLESHEPLCGQLS 173

Query: 168 GPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
             +L  + P+++ + S  +  LGS    G+++  S DA  +    GT  L  +  ++  L
Sbjct: 174 TEQLEFLFPDSQ-IASAVLIPLGSPKAQGLLVMGSHDAERFHADMGTDFLQFMGELVSHL 232

Query: 228 LERWI 232
           L+ W+
Sbjct: 233 LKLWL 237


>UniRef50_Q2BRF9 Putative uncharacterized protein n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BRF9_9GAMM
          Length = 228

 Score = 56.6 bits (135), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 11/218 (5%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQA 79
           V +YL ++P+FF RN + +E + VPH     VSL+E      R     L  +++ L++ A
Sbjct: 14  VAEYLAQHPDFFSRNVKLLEKLHVPHETGRAVSLIERQTTVLREKNQNLTAHLSDLIDIA 73

Query: 80  IANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRLGAPSNH 138
             N+  F +   +  +L  A +LDD+ +       +D      +L LF  +     P + 
Sbjct: 74  RHNDLQFEKTKRMVLALLEAETLDDIAVAIDESLCQDFASDSTALILFTSK-----PLDV 128

Query: 139 THLALSRQSFEPLRIQRLGQEQHYLGPLNGPE-LLVVLPEAKAVGSVAMSMLGSDADLGV 197
            +L L  +         +G      G L+  E   +   E+  V S A+  L     LG+
Sbjct: 129 NNLRLMLRDDATAISNLIGTNLPTCGRLSEVENQFIFADESVKVQSAAVIPLVQGETLGL 188

Query: 198 VLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           +   S DA+++   QGT LL  +     E+L R   R+
Sbjct: 189 LAIGSFDANYFSSSQGTVLLSYVG----EVLSRVAYRI 222


>UniRef50_C7R6T1 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM
           16069 RepID=C7R6T1_KANKD
          Length = 225

 Score = 56.2 bits (134), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 13/212 (6%)

Query: 23  YLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIAN 82
           YL ++PEFF  +   ++ +R+ H V G+VSLVE  +   RN    L+  +  L++ A +N
Sbjct: 20  YLEQHPEFFENHQDLLDKLRLQHKVYGSVSLVERQILGLRNKAEKLQTQLNTLIDNAHSN 79

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTHL 141
             L  +   L  ++ ++ S  +M+ R     RD   L    L LF D   L    N++ +
Sbjct: 80  GDLLNKCAELFVAMISSHSTQEMIDRLLEHLRDNFELDNVQLWLFDDSGTL-HHVNYSDI 138

Query: 142 ALSRQSFEPLRIQR---LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVV 198
            + RQ  +   IQ     G+    +  L G +          + S ++  LG ++ +G++
Sbjct: 139 QMIRQLTDQHFIQNDPICGRVTESISQLFGGD--------HELESYSIIPLGENSRVGII 190

Query: 199 LFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
              S+D   +    GT  L  I  +    L++
Sbjct: 191 ALGSKDVDLFTADMGTLFLRLIGDVTEACLDK 222


>UniRef50_B8GT90 Putative phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp.
           HL-EbGR7 RepID=B8GT90_THISH
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 17/207 (8%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L + AV  +L  +P+FF R+   ++ +++PH   G VSL+E  +   R+    LE  +  
Sbjct: 12  LSEEAVEAWLRSHPDFFERHLALLDVLKLPHASGGAVSLIERQIGWLRDKNRQLERKLLD 71

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLG 133
           L++ A  NE L   + +L   L  A SLD +L       R +       +RL      LG
Sbjct: 72  LVQLARENERLSQHMHHLALGLMDADSLDAVLATTQEQLRTEFRADHVVVRL------LG 125

Query: 134 APSNHTHLAL----SRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA--VGSVAMS 187
            P+   H       +  S E L   R    +   G L+  +L  +LPEA      +VA+ 
Sbjct: 126 DPAQGLHFVAEGDPALNSLESLFETR----RPLCGRLSDEQLTALLPEADTPVQSAVAVP 181

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGT 214
           ++  +  LG++   SR+ + +  G GT
Sbjct: 182 LMDGNRRLGILALGSREDTRFHPGMGT 208


>UniRef50_A1TXX8 Putative uncharacterized protein n=3 Tax=Marinobacter
           RepID=A1TXX8_MARAV
          Length = 249

 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           EL    V +YL  NP+FFI     + ++ +PH     +SLVE  +   R     L   + 
Sbjct: 12  ELTREQVAEYLRANPDFFIGQDELLRSLTLPHDSGRAISLVERQVHLFREQRDTLRRELV 71

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRL 132
            L+  A  N+ LF +   L   +  A +L DM        R D GL  AS+ LF +  +L
Sbjct: 72  ELVSIARHNDRLFEKSKRLLMQVIEARNLQDMAAAIDDSIRGDFGLDAASVLLFSETGQL 131

Query: 133 GAPS--NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML 189
            +    +    A +R+    L    L  E+   G     E   + P+  + + SVA+  L
Sbjct: 132 QSQGALHMVDAAAARERLGSL----LEGERAVCGQFRENEREFLFPDRDEPIASVALVPL 187

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             +  +GV    S +  ++ Q  G+  L  I+  L  LL   ++R
Sbjct: 188 RHEGLVGVFAVGSCEPGYFDQSMGSLFLSYISDTLSRLLPPMLKR 232


>UniRef50_A6W1A9 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W1A9_MARMS
          Length = 221

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 20/218 (9%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           + +  V+ YL K P+FFIR+A  +E++ +PHPV G  VSL+E+ +   R           
Sbjct: 1   MSEEEVIQYLSKTPDFFIRHADLLESLTLPHPVNGKVVSLLEYQVNLLRKTTADYRAQFE 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRL---FPDR 129
            L+E A  NE    +   L  +    S+LDD+ +      R D  ++  +L L   FPD 
Sbjct: 61  RLVEVARENESTMQKSRRLVLAGLTCSTLDDLAVIIDDMVRDDFEVSHHALVLFGEFPDS 120

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPEL-LVVLPEAKAVGSVAMSM 188
                      + LS  +         G    + G L   E+  + L +A ++ SVA+  
Sbjct: 121 AVRSHKLVEDDVFLSHAA---------GFTDCFCGMLPANEMSFLFLDDAPSIRSVAVLP 171

Query: 189 L-----GSDADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
           L     G     GV++  + + S +++ +G   L  +A
Sbjct: 172 LLSREGGEVRKCGVLVLGAENKSAFEKEKGALFLQYLA 209


>UniRef50_Q1QSV0 Putative uncharacterized protein n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QSV0_CHRSD
          Length = 239

 Score = 53.1 bits (126), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 40/221 (18%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHP-VRGTVSLVEWHMARARNHIHVL 68
           E  T LD   V  +L ++P+FF+     ++ ++VPHP  +G +SL+E  +   R      
Sbjct: 8   EPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDLRERAETA 67

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLD--------DMLMRFHRWARDL---- 116
           E  +  L+E A  NE  + R   L  +L  + S+D         +  RF   A  L    
Sbjct: 68  EWRLEHLLETARHNEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQAVALWLEP 127

Query: 117 GLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPL------RIQRLGQE--QHYLGPLNG 168
           G  GA+L+  P R+ L  P        +R +F+ L      R  RL ++  QH L     
Sbjct: 128 GTDGATLQ--PPRFALDTP--------TRAAFDELLDGHNSRCTRLPRDTWQHLLPHTTP 177

Query: 169 PELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQ 209
           P+           GS A++ L     LG +L  S+++ H++
Sbjct: 178 PD---------QHGSCAVTRLTVGEPLGYLLLASQESEHFR 209


>UniRef50_Q0AFS2 Putative uncharacterized protein n=2 Tax=Nitrosomonas
           RepID=Q0AFS2_NITEC
          Length = 233

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 11/221 (4%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALLMEQ 78
           VV YL  +P+FF  N   +E++  PHP  G  +S+ E  +A  R    +L+  +  L++ 
Sbjct: 7   VVQYLQDHPQFFEENPDLMESLHFPHPYEGRAISINERQVAMLREKNRLLQSRLQELVDV 66

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDML--MRFHRWARDLGLAGASLRLFPDRWRLGAPS 136
              N+ +  ++  L  +L +  SL +ML  +++H    D  +   +LRL    W++    
Sbjct: 67  GEKNDVIGEKMHRLTVALLSFDSLPEMLHGLQYH-LCEDFSIPHVALRL----WQIDELG 121

Query: 137 NHTHLALS--RQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSVAMSMLGSDA 193
               L      Q+   + I   G    Y GP    E+      +A+ + S A+  L   +
Sbjct: 122 TQADLPSPEFNQTSSNIHILAQGMPHPYCGPEIDDEIRQWFEMDAEYLQSFALIPLKKQS 181

Query: 194 DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             G+++  S +   +    GT  L  +  M+   + R I++
Sbjct: 182 GFGLLVMASPEVERFFPDMGTLYLERLGDMVSSSITRLIQQ 222


>UniRef50_C1D8P9 DUF484 domain containing protein n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1D8P9_LARHH
          Length = 214

 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 20/219 (9%)

Query: 19  AVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENMALLME 77
           A+  +L +NP+FF ++   +  +RVP P + GT+ L+E  +   ++    L   MA LM 
Sbjct: 5   AIAVWLTRNPDFFEKHPDVLAELRVPAPRQEGTIPLIEKQVRVLKDKTRQLNAAMAQLMA 64

Query: 78  QAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLGA-- 134
              +N+ +      L   L  A+S++ ++         D  + G         W+LG   
Sbjct: 65  YGESNDQIVAATHRLALHLMRATSVETVMAAVRASMDDDFAVTG---------WQLGLWH 115

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGSDA 193
           P    H  LSR+   PL +     E   +G    PE++  LP+ A A  S A++ L + A
Sbjct: 116 PQAAGH-GLSRK---PLPLSARALESPVVGHYLPPEMMAWLPQTADAWQSFALAALKNPA 171

Query: 194 D--LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
               G ++  S     +     T+LL +IA ++    ER
Sbjct: 172 GEAFGALILASESEHRFSPDMETRLLADIAELIAAAFER 210


>UniRef50_Q60AJ3 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus
           RepID=Q60AJ3_METCA
          Length = 234

 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQA 79
           V DYL K+P+FF      +E++ VPHP    VSLV   +   R      +  +  ++  A
Sbjct: 19  VADYLWKHPDFFHDQLDLLESMHVPHPCGEAVSLVARQIELLRGKNRKQQGQLNDILRIA 78

Query: 80  IANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG--ASLRLF 126
             N+ LF R   L  +L  A+S+DDML    +W+   G      S+R+F
Sbjct: 79  RENDALFARFHRLTLTLLDAASVDDMLAGL-KWSLHEGFQADFVSVRVF 126


>UniRef50_C3X4I5 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes
           RepID=C3X4I5_OXAFO
          Length = 225

 Score = 50.4 bits (119), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 24/219 (10%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           +D   V  YL+ +P+FF  +A  +  +R+  PV G TVSL E  +   R+    LE  ++
Sbjct: 5   IDSNTVAQYLVDHPDFFETHADILPGLRLTSPVIGKTVSLHERQIEVLRSKHKALELQLS 64

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRL------F 126
            LM  A AN+ L  ++L     L    +   M        + + G+   +LRL      +
Sbjct: 65  RLMHAAQANKTLMEKILDWTCPLLKEQNDAAMPQTIVSGLQSVFGIPAVTLRLWNIRPEY 124

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPL-NGPELLVVLPEAKAVGSVA 185
            D W             ++ + E +R    G    Y G +    E +  L  A  + SVA
Sbjct: 125 ADSW------------FTQHASEDIRNAANGMSHPYCGKVPENQEAVKWLDHAAEIRSVA 172

Query: 186 MSMLGSDAD---LGVVLFTSRDASHYQQGQGTQLLHEIA 221
           +  L +  +    G+++  S DA+ +Q    T  L +I 
Sbjct: 173 IVPLKTGPESLPFGLLVMGSPDATRFQNDMATDFLDDIG 211


>UniRef50_Q3IDS1 Putative uncharacterized protein n=2 Tax=Alteromonadales
           RepID=Q3IDS1_PSEHT
          Length = 203

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 22/205 (10%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
           ++EL+ + VVDYL  +P+F I++   +  + +    +G  SLV     + R H  +L+  
Sbjct: 1   MSELNAQQVVDYLQHHPDFLIQHPELLAQLELQQQAQGATSLVHIQQRQLREHNTLLKNQ 60

Query: 72  MALLMEQAIANEGLFYRLLYL-QRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRW 130
           +A + + A  NE + YRL  L  + L + +  D +        +D+  +       PD  
Sbjct: 61  IASMNKYAAQNEQV-YRLFSLCHQQLCSNNDFDALASNL----QDIICSN------PD-- 107

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
                 +   L      +  L   RL    HYLG +N  E  ++  +     S A+ ++G
Sbjct: 108 -----ISDCRLVKYDTKYAQLVEHRLSNSGHYLGRINQQERDLLFSD--TAQSTAIYLIG 160

Query: 191 S-DADLGVVLFTSRDASHYQQGQGT 214
             +  + ++ F S +A+H++  Q T
Sbjct: 161 DINKPIAILAFASNNANHFEPAQDT 185


>UniRef50_C6WT35 Putative uncharacterized protein n=1 Tax=Methylotenera mobilis JLW8
           RepID=C6WT35_METML
          Length = 230

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 25/214 (11%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHP-VRGTVSLVEWHMARARNHIHVLEENMALLMEQ 78
           V DYL  +P FF +NA  +  I +P+P   G +SL E      R+ I V+E  MA ++  
Sbjct: 14  VKDYLRNHPSFFEKNATLLTEITLPNPHGSGVISLTERQQIAQRDKIRVIEAMMAQMIVH 73

Query: 79  AIANEGLFYRL------LYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLF--PDRW 130
           A  N+    ++      L  Q+S +A  +L    ++      D  +    +R++  P   
Sbjct: 74  AEENDATSAKVHKLSVKLLNQQSFSALQTLIAETLKL-----DFAVTEPLIRIWVKPSNS 128

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
            +   +  TH++      +      +   Q Y G    PE++  L ++K    V + +  
Sbjct: 129 AIIQDAVFTHVS------DAFNEWVMSLTQPYCGA--KPEVMGDLVDSKLQSFVIIPLGK 180

Query: 191 SDAD---LGVVLFTSRDASHYQQGQGTQLLHEIA 221
             AD    GV++  S D   ++ G GT  L  I 
Sbjct: 181 IAADQRPFGVLILGSSDKDRFKAGMGTMYLEHIG 214


>UniRef50_A3YDJ8 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3YDJ8_9GAMM
          Length = 223

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 16/223 (7%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRG--TVSLVEWHMARARNHIHVLEENMALLME 77
           V+++L  NP+FF  +   +E + VPH +    TVSL+E  +   R      +     L+ 
Sbjct: 6   VIEFLKANPKFFHEHLDLLEMMDVPHALEANNTVSLIERQVFLLRKSAEDYKSQFERLVH 65

Query: 78  QAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLGAPS 136
            A  NE + ++   L  +    +SLD+  +      R D  +   SL LF D      P 
Sbjct: 66  VARENEAIMHKSRRLVLASMGCASLDEFAIMLDDAMRDDFNIKLHSLVLFSD-----LPL 120

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML------- 189
           +      +    EP+  + L +   Y G L+  E    L E KA   ++ ++L       
Sbjct: 121 DTNIRVTAMADAEPVLKEVLLKTGCYCGALSVAE-AKYLFEDKADQVMSSAVLPLVSHYQ 179

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           G+D  +G++   S +   ++Q +G   L  ++ +L  +L R +
Sbjct: 180 GADKYIGMLALGSDELEKFKQEKGVLFLEYLSDILSAILIRLL 222


>UniRef50_A6T2Z5 Uncharacterized conserved protein n=72 Tax=Burkholderiales
           RepID=A6T2Z5_JANMA
          Length = 222

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 15/214 (7%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           LD   V DYL+ NP+FF  +A  +  I++   + G T+SL E  M   R  + V+E  +A
Sbjct: 5   LDSNTVADYLLDNPQFFEEHAELLSRIKLSSALGGRTLSLQERQMDVLREKLKVMELRLA 64

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
            LM     N+ +  +     R+L  A +  D+        +    +   +LRL    W +
Sbjct: 65  ELMRIGQENDQITRKFHTWTRALLQARNDVDLPHTLTTGLQSAFSVPHVTLRL----WGV 120

Query: 133 GAPSNHTHLA--LSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
                HT  A  +S  S    R+   G    + G  N  E    L +A A+ SVA+  L 
Sbjct: 121 SEAFAHTWFAAPVSADS----RLFSNGLTTPFCGSNNDFEAASWLEDAPAIQSVALLPLR 176

Query: 191 SD---ADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
            D      G+++  S D   +     T  L  I 
Sbjct: 177 LDDATEAFGLLVLGSPDPHRFTSDMATDFLTNIG 210


>UniRef50_A0Y9E1 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0Y9E1_9GAMM
          Length = 231

 Score = 44.7 bits (104), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 5/222 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           ++ +  V  +L  +  FF+++   +  + + H     VSL+E  ++  R     + + + 
Sbjct: 12  DITEEQVAHFLKSHSGFFLKHDDLLVDLTLAHDSGHAVSLLERQVSLLRERNVDMRDRLN 71

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWRL 132
            L++ A  N  LF +   L  +L  A SLD ++  F+R    D  +  +S+ LF D  + 
Sbjct: 72  SLLDSAKTNGHLFEKTKQLVLALIDAQSLDAIVNTFNRSLLSDFVVDFSSMTLFGDAAQH 131

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
            +  +      +  +  P  ++  G     L P    EL  +  E A  + S A+  L  
Sbjct: 132 DSTLSRMVPVDTAYATIPGLLKSNGTTAGVLRP---EELQFLFSEQADQISSAAVVALNH 188

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
              LGV+   S+D  H+    GT  L  IA +L  +L + ++
Sbjct: 189 TKPLGVLAIGSKDPDHFSSDMGTLFLEYIAEVLNRVLPQHLQ 230


>UniRef50_Q2Y5Y9 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis
           ATCC 25196 RepID=Q2Y5Y9_NITMU
          Length = 232

 Score = 44.7 bits (104), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 17/219 (7%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALLMEQ 78
           + +YL  NPEFF  +A  +  I+VP+P  G  +SL E  +   R    +L++ +  L+  
Sbjct: 21  IAEYLRANPEFFEAHASMLADIQVPNPHDGRAISLSERQILALREKNQILQDKLEELILF 80

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGAS-LRLFPDRWRLGAPSN 137
              N+ +  ++  L  SL A   L D+L       R+  L   S LR+    W +G    
Sbjct: 81  GKENDAIAEKMHKLAVSLLAFRRLPDLLDGLTFALRESFLVPHSVLRI----WNIGIDGP 136

Query: 138 HTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-----PEAKAVGSVAMSMLGSD 192
                     F P+  +     ++ L P  GP +   +      +A+ + S AM+ L  D
Sbjct: 137 LP------PEFLPVSSEVHAMAENLLHPYCGPHVPDEIRSWFGEQAEHLRSFAMTALHGD 190

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
             +G+++  S ++  +    GT  L  +  +    L+R+
Sbjct: 191 QTIGLLVMGSEESQRFYPEMGTVYLGRLGELASASLKRF 229


>UniRef50_Q1H4W9 Putative uncharacterized protein n=2 Tax=Methylophilaceae
           RepID=Q1H4W9_METFK
          Length = 229

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 6/221 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHP-VRGTVSLVEWHMARARNHIHVLEENM 72
           ++ +  V+ YL  +P+FF  +   +  + +P P  +GTVSL E      R+ I VL+  +
Sbjct: 11  QVTEYQVMSYLRAHPQFFEHHTGLLAELYLPSPHGQGTVSLAERQQLAQRDRIRVLDAKL 70

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
           A LM+    N+ +  ++  L   L A   ++ ++    H    D  +   SLRL    W 
Sbjct: 71  AQLMKYGEENDAIGEKVHRLSLGLLATERMEVLVSLLEHSLHEDFQVPYVSLRL----WA 126

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
               S +  L +     + L+    G    Y G   G  L           S A+  L +
Sbjct: 127 KPRESGNGSLPIFASVDQELQRWAQGLATPYCGNRPGMPLQGWFGVEARPASFAVMALKA 186

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
               GV+   S D   +    GT  L  I+ ++   L R I
Sbjct: 187 QQVFGVLALASDDDKRFYPDMGTLYLKRISELISAALLRHI 227


>UniRef50_A0Z3C5 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2080 RepID=A0Z3C5_9GAMM
          Length = 236

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 25/210 (11%)

Query: 23  YLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIAN 82
           +L+ +P+FF      +EA+ +PH   G++SLVE  +A  R     +  ++A L   A  +
Sbjct: 26  FLMHHPDFFEGRKELLEALEIPHGGAGSISLVERQVAALRERNIAMRSHLAELTHNAETS 85

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLA 142
           E +      +  +L   S +  +     +   + GL    L  F   +     ++H  L+
Sbjct: 86  ESILEATQQMILALLQCSEVSGL-----KPTIEAGL----LDFFGVEY-----ASHVWLS 131

Query: 143 LSRQSF-EPLRIQR---------LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG-S 191
            + ++F E +  +          L +++ Y G     E+L + P   + GS A++ L  +
Sbjct: 132 AASEAFGEGVACETDRQDIIETLLRRQRAYCGVFRADEMLAMFPGCDSEGSAAIAPLHLN 191

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
           +  +G +   S D   Y    GT  L  +A
Sbjct: 192 NVLIGAIGVGSSDVHRYDSSVGTLFLEHLA 221


>UniRef50_C7RPB7 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1 RepID=C7RPB7_9PROT
          Length = 217

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 10/215 (4%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALLMEQ 78
           V  YL  NP+FF  +A  V  + VPHP  G T+S+ E  M   R+    LE  M  L++ 
Sbjct: 6   VAHYLQNNPQFFELHADLVANMVVPHPHSGRTISITERQMLALRDKNRQLEGKMGELLQF 65

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLGAPSN 137
              N+ +  ++  L   + AA S   +L   +   R D  +   ++RL    WR   P  
Sbjct: 66  GEENDEISQKMHRLAVGMIAARSFQAVLHTLNLHLRDDFDVPHVAVRL----WR--HPEG 119

Query: 138 HTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVGSVAM-SMLGSDADL 195
           +  L    +  + L+         Y G  +G E      EA   V S A+ +M      +
Sbjct: 120 NDDLPEFAEVSQELQAFAETLTLPYCGSTSGFETSSWFGEASLHVRSQALIAMRDGGGTI 179

Query: 196 GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           G++   S D   +    GT  L  +  M    L R
Sbjct: 180 GMIALGSEDLERFYTQMGTIYLERLGEMASAALAR 214


>UniRef50_A1WWB4 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila
           SL1 RepID=A1WWB4_HALHL
          Length = 236

 Score = 40.8 bits (94), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 21/232 (9%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LD+  V  YL ++P+   R+   +  + + H      SL+E  +   R     L   +  
Sbjct: 13  LDEAEVAAYLAEHPDLLHRHPELLARLELRHDCGDATSLIEHQVRVLREESAGLRRRLDD 72

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGAS--LRLFPDRWRL 132
           ++  A  NEG   RL  L   L AA  L   +       R+   A A   L + P+    
Sbjct: 73  MVRVARQNEGTAERLHELTLDLFAADDLQAAVEALRAGLREGFQADAVGLLLIAPE---- 128

Query: 133 GAPSNHTHLALSR---------QSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVG 182
            A    TH  +             F PL    L + +   G     ++  + P+ + AV 
Sbjct: 129 -AAGGETHAPIPEILDAGDPALTCFRPL----LERGRPSCGTPTEAQVRTIFPDTETAVA 183

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           S A+  +  +  +GV+   S D   Y  GQGT  L  +      +L+R + R
Sbjct: 184 SAALVPMIDERAVGVLGIGSSDPQRYHPGQGTVFLRRLGTTAARVLDRLLHR 235


>UniRef50_C5V603 Putative uncharacterized protein n=2 Tax=Gallionellaceae
           RepID=C5V603_9PROT
          Length = 208

 Score = 40.4 bits (93), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           ++   V  YL+  PEFF  +   +  I + HP  G T+SL E  +   R    VLE+ M 
Sbjct: 1   MNSEDVAHYLLNTPEFFEDHLDTLAQITLAHPHGGRTISLGERQLLALREKNKVLEKQMY 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLFPDRWRL 132
            ++E A  NE L  ++     SL AA  L  +        RD+  +   ++ L    W++
Sbjct: 61  EMLEFARENEALQNKVHEFTVSLFAARDLTTLQEMIPHLLRDIFSVPHVAMHL----WQV 116

Query: 133 GAPS 136
             PS
Sbjct: 117 TPPS 120


>UniRef50_Q47JM9 Putative uncharacterized protein n=2 Tax=Betaproteobacteria
           RepID=Q47JM9_DECAR
          Length = 223

 Score = 40.0 bits (92), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 12/221 (5%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALLMEQ 78
           + +YL  NP FF + A  +  I VPHP  G  VSL E  M   R      E  +A L+  
Sbjct: 9   IAEYLKNNPSFFEQYADLMAQIFVPHPHGGRAVSLAERQMLTLREKNRSTESKLAELIAF 68

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDM--LMRFHRWARDLGLAGASLRLFPDRWRLGAPS 136
              N+ +  ++  L  +L AA +   +  L+ FH    D  +   +LRL+        P 
Sbjct: 69  GEENDQISEKVHRLSVALIAAETFQAVIHLLNFH-LRDDFSVPHVALRLWDK------PE 121

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML-GSDAD 194
               L       E L++      + Y G   G        E A  + S A+  L      
Sbjct: 122 EIEGLPEFAAVSEELQVFAETLARPYCGSTAGFGTASWFGEHASHIRSQALIALRNGGGT 181

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           +G++   S DA  +    GT  L  +  M+   L R  + V
Sbjct: 182 IGMIALGSEDAQRFYADMGTLYLERLGEMVSAALARVTKSV 222


>UniRef50_C6MFM7 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212
           RepID=C6MFM7_9PROT
          Length = 235

 Score = 40.0 bits (92), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 9/215 (4%)

Query: 20  VVDYLIKNPEFFIRNARAVEAIRVPHPV-RGTVSLVEWHMARARNHIHVLEENMALLMEQ 78
           V  YL ++P+FF + A  +  +++ HP     +SL E  +   R    VL++ +  L+  
Sbjct: 6   VAQYLQEHPQFFNQYADLLADLQICHPQDEKVISLNERQIIALRERNRVLQDKLLELISF 65

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDMLMR-FHRWARDLGLAGASLRLFPDRWRLGAPSN 137
              N+ +  ++  L  +L + S++D++    +     D  +   ++RL    W + A   
Sbjct: 66  GEENDAIGEKMHRLVIALLSVSNIDELFHALYFSLKEDFAIPLVAMRL----WNV-ANVT 120

Query: 138 HTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGSDADLG 196
            +H   +  S E +R       Q Y G     E+     E A+ + S AM  L +   +G
Sbjct: 121 KSHAEFTPVS-EDVRTIAESLPQPYCGNHIADEIKQWFGEGAEHLNSFAMIPLNTARTIG 179

Query: 197 VVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +V+  S DA  +    GT  L  +  ++   + R+
Sbjct: 180 LVVLGSPDAERFYTEMGTLHLKRLGELVCTTVTRY 214


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P55886 Uncharacterized protein yigA n=156 Tax=Enterobac...   263   3e-69
UniRef50_D2TWV4 Putative uncharacterized protein n=1 Tax=Arsenop...   239   7e-62
UniRef50_B3PEI7 Putative uncharacterized protein n=2 Tax=Gammapr...   226   6e-58
UniRef50_Q21P79 Putative uncharacterized protein n=1 Tax=Sacchar...   224   2e-57
UniRef50_B7S2B7 Putative uncharacterized protein n=1 Tax=marine ...   221   1e-56
UniRef50_Q1YSU9 Putative uncharacterized protein n=1 Tax=gamma p...   220   3e-56
UniRef50_O05323 ORF 240 protein n=25 Tax=Pseudomonadaceae RepID=...   212   1e-53
UniRef50_A1TXX8 Putative uncharacterized protein n=3 Tax=Marinob...   208   1e-52
UniRef50_D0I355 Putative uncharacterized protein n=1 Tax=Grimont...   207   3e-52
UniRef50_Q3JEA1 Putative uncharacterized protein n=2 Tax=Nitroso...   207   3e-52
UniRef50_Q2SQ63 Uncharacterized protein conserved in bacteria n=...   206   5e-52
UniRef50_C4LDU7 Putative uncharacterized protein n=1 Tax=Tolumon...   205   1e-51
UniRef50_Q1N420 Putative uncharacterized protein n=1 Tax=Bermane...   202   7e-51
UniRef50_Q1ZLA2 Putative uncharacterized protein n=4 Tax=Photoba...   202   1e-50
UniRef50_D0Z0U0 Putative uncharacterized protein n=1 Tax=Photoba...   201   2e-50
UniRef50_B5JX80 3',5'-cyclic-nucleotide phosphodiesterase n=1 Ta...   200   2e-50
UniRef50_B5FCQ9 3'-5'-cyclic nucleotide phosphodiesterase n=3 Ta...   200   2e-50
UniRef50_A7BTH8 Protein containing DUF484 n=1 Tax=Beggiatoa sp. ...   198   9e-50
UniRef50_A8TB79 Site-specific tyrosine recombinase XerC n=56 Tax...   198   9e-50
UniRef50_Q2BRF9 Putative uncharacterized protein n=1 Tax=Neptuni...   198   1e-49
UniRef50_A4A9F1 Putative uncharacterized protein n=2 Tax=unclass...   197   3e-49
UniRef50_Q65RL8 Putative uncharacterized protein n=5 Tax=Pasteur...   197   3e-49
UniRef50_B9ZNC2 Putative phytochrome sensor protein n=1 Tax=Thio...   196   4e-49
UniRef50_Q0AFS2 Putative uncharacterized protein n=2 Tax=Nitroso...   195   9e-49
UniRef50_Q60AJ3 Putative uncharacterized protein n=1 Tax=Methylo...   195   1e-48
UniRef50_B8GT90 Putative phytochrome sensor protein n=1 Tax=Thio...   195   1e-48
UniRef50_A6F902 Uncharacterized conserved protein, YigA-like pro...   192   7e-48
UniRef50_A4BTZ4 Putative uncharacterized protein n=1 Tax=Nitroco...   190   3e-47
UniRef50_Q48AR7 Putative uncharacterized protein n=1 Tax=Colwell...   188   1e-46
UniRef50_A4SRX0 Putative uncharacterized protein n=2 Tax=Aeromon...   187   2e-46
UniRef50_C3X4I5 Putative uncharacterized protein n=2 Tax=Oxaloba...   186   5e-46
UniRef50_B8KSV2 Putative uncharacterized protein n=1 Tax=gamma p...   184   2e-45
UniRef50_C5S7I3 Putative uncharacterized protein n=1 Tax=Allochr...   184   3e-45
UniRef50_A3YDJ8 Putative uncharacterized protein n=1 Tax=Marinom...   182   1e-44
UniRef50_C7R6T1 Putative uncharacterized protein n=1 Tax=Kangiel...   180   3e-44
UniRef50_B4S2D8 Uncharacterized conserved protein, YigA-like pro...   179   5e-44
UniRef50_Q5QUS7 Uncharacterized conserved protein, YigA-like n=2...   179   6e-44
UniRef50_Q088K7 Putative uncharacterized protein n=21 Tax=Shewan...   179   7e-44
UniRef50_A6W1A9 Putative uncharacterized protein n=1 Tax=Marinom...   173   4e-42
UniRef50_UPI0000E105BC Uncharacterized conserved protein, YigA-l...   173   5e-42
UniRef50_C6WT35 Putative uncharacterized protein n=1 Tax=Methylo...   171   2e-41
UniRef50_C1D8P9 DUF484 domain containing protein n=1 Tax=Laribac...   163   4e-39
UniRef50_C7HXH1 Putative uncharacterized protein n=1 Tax=Thiomon...   162   1e-38
UniRef50_Q1QSV0 Putative uncharacterized protein n=1 Tax=Chromoh...   159   6e-38
UniRef50_Q3IDS1 Putative uncharacterized protein n=2 Tax=Alterom...   138   2e-31
UniRef50_O31086 Orf235 (Fragment) n=11 Tax=Enterobacteriaceae Re...    78   2e-13

Sequences not found previously or not previously below threshold:

UniRef50_A0Y9E1 Putative uncharacterized protein n=1 Tax=marine ...   184   2e-45
UniRef50_Q47JM9 Putative uncharacterized protein n=2 Tax=Betapro...   177   2e-43
UniRef50_A1K307 3',5'-cyclic-nucleotide phosphodiesterase n=3 Ta...   176   5e-43
UniRef50_A6T2Z5 Uncharacterized conserved protein n=72 Tax=Burkh...   176   6e-43
UniRef50_Q1H4W9 Putative uncharacterized protein n=2 Tax=Methylo...   168   9e-41
UniRef50_A1WWB4 Putative uncharacterized protein n=1 Tax=Halorho...   167   2e-40
UniRef50_C6MFM7 Putative uncharacterized protein n=1 Tax=Nitroso...   167   3e-40
UniRef50_C7RPB7 Putative uncharacterized protein n=1 Tax=Candida...   164   3e-39
UniRef50_A0Z3C5 Putative uncharacterized protein n=1 Tax=marine ...   163   6e-39
UniRef50_Q0VM17 Putative uncharacterized protein n=2 Tax=Alcaniv...   159   6e-38
UniRef50_Q2Y5Y9 Putative uncharacterized protein n=1 Tax=Nitroso...   158   1e-37
UniRef50_A9IH30 Putative uncharacterized protein n=5 Tax=Bordete...   157   3e-37
UniRef50_A4B9F2 Putative uncharacterized protein n=1 Tax=Reineke...   155   1e-36
UniRef50_Q2PYI2 Putative uncharacterized protein n=1 Tax=uncultu...   154   2e-36
UniRef50_B2SMW7 Putative uncharacterized protein n=20 Tax=Xantho...   150   4e-35
UniRef50_Q0ACL8 Putative uncharacterized protein n=1 Tax=Alkalil...   148   1e-34
UniRef50_A1WRJ5 Putative uncharacterized protein n=19 Tax=cellul...   146   8e-34
UniRef50_C0N8U6 Putative uncharacterized protein n=1 Tax=Methylo...   140   5e-32
UniRef50_Q31IM1 Putative uncharacterized protein n=1 Tax=Thiomic...   136   5e-31
UniRef50_C5V603 Putative uncharacterized protein n=2 Tax=Gallion...   135   9e-31
UniRef50_Q7NV17 Putative uncharacterized protein n=2 Tax=Chromob...   134   3e-30
UniRef50_A6GU47 Putative uncharacterized protein n=1 Tax=Limnoba...   126   7e-28
UniRef50_C6NUR3 Putative uncharacterized protein n=1 Tax=Acidith...   118   1e-25
UniRef50_B9NJT9 Predicted protein (Fragment) n=2 Tax=cellular or...   117   3e-25
UniRef50_A4T0G4 Putative uncharacterized protein n=2 Tax=Polynuc...   116   7e-25
UniRef50_A8TIN7 Site-specific tyrosine recombinase XerC n=1 Tax=...   110   3e-23
UniRef50_B5ENS3 Putative uncharacterized protein n=2 Tax=Acidith...   107   3e-22
UniRef50_A4CFE2 Putative uncharacterized protein n=1 Tax=Pseudoa...   105   1e-21
UniRef50_B6IPE1 Putative uncharacterized protein n=1 Tax=Rhodosp...   102   1e-20
UniRef50_C5JAZ1 Conserved uncharacterized protein n=1 Tax=uncult...   100   4e-20
UniRef50_Q2VZB9 Uncharacterized protein conserved in bacteria n=...    98   2e-19
UniRef50_D0L0D3 Putative uncharacterized protein n=1 Tax=Halothi...    97   6e-19
UniRef50_A0L4T5 Putative uncharacterized protein n=1 Tax=Magneto...    94   4e-18
UniRef50_B4RB98 Putative uncharacterized protein n=4 Tax=Cauloba...    92   1e-17
UniRef50_C0N6Q6 GGDEF domain protein n=1 Tax=Methylophaga thioox...    89   9e-17
UniRef50_Q0AKV4 Putative uncharacterized protein n=1 Tax=Maricau...    89   1e-16
UniRef50_Q0F1F2 Sensory box protein n=1 Tax=Mariprofundus ferroo...    82   2e-14
UniRef50_B0T3E1 Putative uncharacterized protein n=1 Tax=Cauloba...    81   3e-14
UniRef50_A7HT45 Putative uncharacterized protein n=1 Tax=Parviba...    80   4e-14
UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp....    80   4e-14
UniRef50_A4G925 Putative uncharacterized protein n=2 Tax=Hermini...    80   8e-14
UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthin...    78   2e-13
UniRef50_C0DT94 Putative uncharacterized protein n=1 Tax=Eikenel...    76   9e-13
UniRef50_B5JXR4 Diguanylate cyclase n=1 Tax=gamma proteobacteriu...    76   1e-12
UniRef50_B2JML9 Diguanylate cyclase with GAF sensor n=6 Tax=Burk...    75   3e-12
UniRef50_C5A928 Diguanylate cyclase n=1 Tax=Burkholderia glumae ...    74   4e-12
UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge...    73   7e-12
UniRef50_A0LL56 Diguanylate cyclase with GAF sensor n=1 Tax=Synt...    71   2e-11
UniRef50_A3UHS7 Tyrosine recombinase n=1 Tax=Oceanicaulis alexan...    71   3e-11
UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr...    71   4e-11
UniRef50_C4XU30 GGDEF domain protein n=1 Tax=Desulfovibrio magne...    67   5e-10
UniRef50_A1B4Z3 Putative uncharacterized protein n=1 Tax=Paracoc...    64   5e-09
UniRef50_B4WFE7 Putative uncharacterized protein n=2 Tax=Brevund...    62   2e-08
UniRef50_Q2BHA0 Sensor histidine kinase n=1 Tax=Neptuniibacter c...    61   2e-08
UniRef50_D2L091 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW...    59   1e-07
UniRef50_D2L4B3 Histidine kinase n=1 Tax=Desulfovibrio sp. FW101...    58   2e-07
UniRef50_C1SHV1 Diguanylate cyclase (GGDEF) domain-containing pr...    58   3e-07
UniRef50_C4XGG2 Sensor protein n=1 Tax=Desulfovibrio magneticus ...    58   3e-07
UniRef50_Q0FEV9 Putative uncharacterized protein n=1 Tax=Rhodoba...    58   3e-07
UniRef50_C5SIN7 Putative uncharacterized protein n=1 Tax=Asticca...    56   9e-07
UniRef50_Q9LCV5 Atp operon (Fragment) n=4 Tax=Rhodospirillum rub...    56   1e-06
UniRef50_A5V2S6 Uncharacterized protein n=1 Tax=Sphingomonas wit...    55   3e-06
UniRef50_C6BU23 Sensor protein n=1 Tax=Desulfovibrio salexigens ...    53   5e-06
UniRef50_A9GBK6 Site-specific tyrosine recombinase XerC n=40 Tax...    52   1e-05
UniRef50_Q2SDE1 Response regulator containing a CheY-like receiv...    48   3e-04
UniRef50_A6VU38 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6...    48   3e-04
UniRef50_C6MIN9 Putative uncharacterized protein n=1 Tax=Nitroso...    47   5e-04
UniRef50_C6HWE5 Diguanylate cyclase/phosphodiesterase with PAS/P...    46   0.001
UniRef50_C0GMT4 Sensor protein n=1 Tax=Desulfonatronospira thiod...    46   0.001
UniRef50_C0Q9U5 Putative reponse regulator (CheY and GGDEF domai...    45   0.003
UniRef50_Q1JWC9 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto...    45   0.003
UniRef50_C7LSE4 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac...    44   0.004
UniRef50_Q5UW88 Sensor protein n=2 Tax=cellular organisms RepID=...    43   0.010
UniRef50_A8ZV84 Diguanylate cyclase with GAF sensor n=1 Tax=Desu...    43   0.011
UniRef50_B4VV26 Tetratricopeptide repeat domain protein n=1 Tax=...    41   0.031
UniRef50_B7RSS4 GGDEF domain protein n=1 Tax=marine gamma proteo...    41   0.037
UniRef50_B0DQM4 Predicted protein n=1 Tax=Laccaria bicolor S238N...    40   0.064
UniRef50_A9AUL9 Anti-sigma-factor antagonist n=1 Tax=Herpetosiph...    40   0.066
UniRef50_A8P5V6 HSF-type DNA-binding domain containing protein n...    40   0.077
UniRef50_A7HH95 Sensor protein n=1 Tax=Anaeromyxobacter sp. Fw10...    40   0.094

>UniRef50_P55886 Uncharacterized protein yigA n=156 Tax=Enterobacteriaceae
           RepID=YIGA_SALTY
          Length = 235

 Score =  263 bits (673), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 202/235 (85%), Positives = 216/235 (91%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           MKQP EELQETLTELDDRAVVDYL  +PEFFIRNA AVEA+RVPHPVRGTVSLVEWHMAR
Sbjct: 1   MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMAR 60

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
           ARNHI+VLEENM LLMEQA ANE LFYRLL+LQ  L AA SLD+ML+RFHRWARDLGLAG
Sbjct: 61  ARNHINVLEENMTLLMEQAHANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAG 120

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           A+LRLFPDRWRLGAPS +THLAL+RQ+FEPLRIQRLGQ QHYLGPLNGPELLVVLPEAKA
Sbjct: 121 ATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQHYLGPLNGPELLVVLPEAKA 180

Query: 181 VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           VGSVAMSM+GSD  LGV+LF+SRD  HYQ GQGTQLL EIALMLPELLERWI+RV
Sbjct: 181 VGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV 235


>UniRef50_D2TWV4 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae
           RepID=D2TWV4_9ENTR
          Length = 251

 Score =  239 bits (609), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 120/220 (54%), Positives = 155/220 (70%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LDD+ VV+YL  NP FFIRNA AVE +RVPHPV   VSLVEW M R R  I  LE++M L
Sbjct: 31  LDDQTVVEYLKSNPHFFIRNAAAVEQMRVPHPVHHAVSLVEWSMKRQRVCIQNLEQDMQL 90

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGA 134
           L+EQA  NE LF RLL L   L+ A    D   R + W+R  GL+GA +RLF D W+LG 
Sbjct: 91  LVEQARNNEILFNRLLKLVIQLSTADDFADFQQRLYAWSRSFGLSGAYIRLFSDCWQLGV 150

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
           P +   + +SRQ+FEP+RIQR G + HYLG LN PE+L+++P+A  VGSVA+S+LG   +
Sbjct: 151 PMDAQKVMISRQAFEPVRIQRFGGKNHYLGTLNNPEILLLMPDANHVGSVAVSLLGLYGN 210

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           LG+V+F+SRD  HYQ+G GT +L  +A +LP+LL RW+ R
Sbjct: 211 LGMVIFSSRDIQHYQKGMGTTMLDHLAKLLPDLLLRWVTR 250


>UniRef50_B3PEI7 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria
           RepID=B3PEI7_CELJU
          Length = 231

 Score =  226 bits (576), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 5/224 (2%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
             L+   V  YL  +P+FF ++   +  + +PH     VSLVE  +A  R     +   +
Sbjct: 11  DPLEPEQVAAYLQAHPDFFAQHPELLAELSLPHESGAAVSLVERQVAILRERNMDMRHRL 70

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWR 131
           + L++ A  N+ LF +   L  SL     + D+L   ++ + +D G+   S+ LF +  +
Sbjct: 71  SKLLDNARENDKLFDKTKRLVLSLLEGQDMGDVLDALYYSFDKDFGIHFTSVLLFGNPDK 130

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSVAMSMLG 190
           +  PS+   +    ++ E +    +   +   G L   EL  +    A  +GSVA   L 
Sbjct: 131 I--PSSQARIVSMGEAREHI-APLIKNSRAMCGTLGSAELAFIFGAHAGEIGSVATVPLM 187

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             +  G++   +RD  +Y+   GT  L  IA +L  LL   + R
Sbjct: 188 HGSAFGLLAIGNRDPHYYRSSMGTLFLGYIAEVLNRLLPPHLPR 231


>UniRef50_Q21P79 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans
           2-40 RepID=Q21P79_SACD2
          Length = 227

 Score =  224 bits (571), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 109/222 (49%), Gaps = 5/222 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
            + D+ V +YL +NP+FF++++R +  + +PH     VSLVE  ++  R+    + + ++
Sbjct: 7   SITDQRVAEYLAENPDFFVKHSRLLGELELPHDSGKAVSLVERQVSVLRDRNMDMRQRLS 66

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWRL 132
            L++ A  N+ LF +   L  +L   + L D++   ++ + ++  +    L +F +   +
Sbjct: 67  NLLDNARENDRLFEKSKRLVLALLECNDLGDLVDALYYSFDKEFNIQHTRLIIFGNHQTV 126

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSVAMSMLGS 191
             PS    +     + + +  +R+   +   G +   E   +   +A  +GS AMS+L  
Sbjct: 127 --PSTAARIENLHVARD-VIGRRIKSPKAVSGGIKDDECKFLFDKDAPHIGSAAMSVLIH 183

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
              LGV+   + D   Y  G GT  L  IA +L  LL ++I+
Sbjct: 184 SKPLGVLAIGNEDPKFYHSGMGTIFLGYIAEVLNRLLPKYIK 225


>UniRef50_B7S2B7 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S2B7_9GAMM
          Length = 228

 Score =  221 bits (564), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 95/223 (42%), Gaps = 8/223 (3%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEE 70
             TEL D  V +YL  N +F  RN   ++ + + H     VSLVE  ++  R     +  
Sbjct: 11  PATELSDEQVREYLKLNGDFLQRNPDMLDHLHISHASGSAVSLVEKQVSVLRERNIDMRH 70

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDR 129
            +  L   A  N+ L+ +   L  +L  A +LD +   F     +D  +  ASL LF   
Sbjct: 71  RLNALTANARDNDKLYEQTRKLVLALLDARNLDSVYSAFMDAMEKDFKVDYASLILF--- 127

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQR-LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSM 188
              G PS+     +       + I   L   +   G L   EL  + P+A  VGS A+  
Sbjct: 128 ---GEPSSDGKCRVETSEAAKIEIGALLKGRKPVCGVLRKEELAYLFPDAGEVGSAALMP 184

Query: 189 LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           L +  +LG++   S DA+ Y    GT  L  IA ++  LL   
Sbjct: 185 LANGEELGLIAVGSADANRYGSSMGTLFLTHIADVIVRLLPHL 227


>UniRef50_Q1YSU9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium
           HTCC2207 RepID=Q1YSU9_9GAMM
          Length = 228

 Score =  220 bits (561), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 7/229 (3%)

Query: 9   QETLTELD--DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
            E  TE+D  ++ V ++L  NP+F  +N   +E + +PH     VSLVE  +   R+   
Sbjct: 3   NEIETEVDPIEKVVGEFLRDNPDFLDKNTDILETMVLPHISGKAVSLVERQVGVMRDRNR 62

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDD-MLMRFHRWARDLGLAGASLRL 125
            +   +  +++ A  N+ LF +   L  +L  A +L   +   +    +D G+   SL L
Sbjct: 63  EMRSRLENILQTAKDNDLLFEKTKRLVLNLLEAKTLGALVEAVYDSLGKDHGIEFYSLTL 122

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSV 184
           F D  +L  P     +A + ++ E +    +G  +   G L   E++ +  E  + VGSV
Sbjct: 123 FGDEKKL--PRTMARIASTEKANERV-GTLIGANRAVCGILREDEMVFLFGERGRQVGSV 179

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           A   L  D+  G++   + D + Y+   GT  L  IA +L  +L   ++
Sbjct: 180 AAVPLRYDSLYGILAVGNSDPNFYKSSMGTLFLSYIAEILNRVLPNHLK 228


>UniRef50_O05323 ORF 240 protein n=25 Tax=Pseudomonadaceae RepID=O05323_PSEFL
          Length = 240

 Score =  212 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 9/230 (3%)

Query: 4   PGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARN 63
           P  +  E+ +  +  AV  YL  +P+FF+ +   +  +R+PH    TVSLVE  M   R 
Sbjct: 8   PAPQPDESPSLPETAAVAAYLEAHPDFFVEHEELLATMRIPHRRGDTVSLVEHQMKILRE 67

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGAS 122
               +   ++ LM+ A  N+ LF +   L  +L  AS+L+D++M      R D  +   S
Sbjct: 68  RNIEMRHRLSHLMDVARDNDRLFDKTRRLILALMDASTLEDLVMSVEDSLRQDFQVPFVS 127

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEA--KA 180
           L LF D              ++    +      L +++   G L   EL  +  E   K 
Sbjct: 128 LILFGDNAMPVG------RWVTHAEAQTAIGGLLTEDKSVSGSLREHELDFLFGEEQRKQ 181

Query: 181 VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           +GS A+  +      GV+   SRD  HY+   GT  L  IA +   +L R
Sbjct: 182 IGSTAVVAIAHQGLHGVLAIASRDPQHYKSSVGTLFLSYIAEVTGRVLPR 231


>UniRef50_A1TXX8 Putative uncharacterized protein n=3 Tax=Marinobacter
           RepID=A1TXX8_MARAV
          Length = 249

 Score =  208 bits (530), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 4/232 (1%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
            +  ++   EL    V +YL  NP+FFI     + ++ +PH     +SLVE  +   R  
Sbjct: 3   EQTARQKAGELTREQVAEYLRANPDFFIGQDELLRSLTLPHDSGRAISLVERQVHLFREQ 62

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASL 123
              L   +  L+  A  N+ LF +   L   +  A +L DM        R D GL  AS+
Sbjct: 63  RDTLRRELVELVSIARHNDRLFEKSKRLLMQVIEARNLQDMAAAIDDSIRGDFGLDAASV 122

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVG 182
            LF +  +L   S      +   +        L  E+   G     E   + P+  + + 
Sbjct: 123 LLFSETGQLQ--SQGALHMVDAAAARERLGSLLEGERAVCGQFRENEREFLFPDRDEPIA 180

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           SVA+  L  +  +GV    S +  ++ Q  G+  L  I+  L  LL   ++R
Sbjct: 181 SVALVPLRHEGLVGVFAVGSCEPGYFDQSMGSLFLSYISDTLSRLLPPMLKR 232


>UniRef50_D0I355 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP
           101886 RepID=D0I355_VIBHO
          Length = 224

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L D +V  +L  NP+FF R  R    +R+PH  RG VSLVE  + R R  +  LEE +  
Sbjct: 15  LTDESVAAFLTDNPDFFCRQPRLAVQLRIPHAERGAVSLVEIQLDRLRERVAALEEEITQ 74

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGA 134
           LM  A  NE LF       ++L AA S DD+       A  L L+  SLRL+  R     
Sbjct: 75  LMGIAAGNENLFRAFSLAHQALFAAESEDDIHQVLCTLAGALNLS-VSLRLYESR----- 128

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
                   L+R+S + ++      ++ YLG L   +    + +A  +GS A+  +  D +
Sbjct: 129 -----RHTLNRKSVDAVKAAHFCGQRIYLGRLRKVDGDQFVSQAPELGSYALVPVVKDKE 183

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           LG + F S D  H+Q    T  + +IA  +  LL +W E
Sbjct: 184 LGFLSFASPDGGHFQPSMDTLFVEQIAEHIAILLTKWQE 222


>UniRef50_Q3JEA1 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani
           RepID=Q3JEA1_NITOC
          Length = 244

 Score =  207 bits (526), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 12/236 (5%)

Query: 2   KQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARA 61
           K P EE+QE      ++++  YL  +P+FF R+   +  + +PHP    +SLVE  +A  
Sbjct: 12  KTPLEEVQER-----EQSIAKYLQTHPDFFARHPDLLSELTIPHPSGAAISLVERQLALL 66

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASS-LDDMLMRFHRWARDLGLAG 120
           R     L+  +  L+E A+ N+ L  ++  L   +  A++    + + F        +  
Sbjct: 67  RGQNRELKRQLRDLIENAMVNDDLSKKVHKLALGVLTAATPQAAIEVLFSSLQTGFDVDV 126

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLG----QEQHYLGPLNGPELLVVLP 176
            +LRLF D   L  P+   HL + R S     ++         Q   G L   +   +  
Sbjct: 127 IALRLFFDGKSLPPPAPD-HLNVMRVSRNAPELEVFASVLKSPQPICGRLTVEQRDYLFG 185

Query: 177 -EAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            EA+   S A+  LG +   G++   S++ + ++   GT  L  + +++   L R 
Sbjct: 186 EEAERAVSCALIPLGEEQRRGMLAMGSQEPNRFRADLGTIFLDYLGVIVERALHRH 241


>UniRef50_Q2SQ63 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SQ63_HAHCH
          Length = 243

 Score =  206 bits (524), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 4/222 (1%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L   AVV YL ++P FF+ +   +  IR+PH     +SLVE  ++  R      E  +  
Sbjct: 14  LTAEAVVAYLREHPNFFVEHEELLNEIRLPHRSGAAISLVERQISLFREQRDHYERQLYD 73

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWRLG 133
           L++ A  N+  F +   L  +L  A SLD++++     +  D  +   SL LF +     
Sbjct: 74  LIDTARQNDRFFEKSKRLLMNLLEARSLDEVVIVLEDSFTGDFQVDFCSLVLFAEHKDF- 132

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA-VGSVAMSMLGSD 192
            P ++   A   +  + L  + L   +   G L   +L V+ P   A + S A+  L   
Sbjct: 133 -PISNVSTASLMECSDALGEELLNSVKAVCGNLEARQLQVLFPHNHADIASCAVIPLRYG 191

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             LG++   SR+  ++  G G+  L  I+  L  +L   + +
Sbjct: 192 DLLGMLSIGSRNERYFNTGMGSLFLSYISESLSRMLPPLLAK 233


>UniRef50_C4LDU7 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187
           RepID=C4LDU7_TOLAT
          Length = 228

 Score =  205 bits (521), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
            + L++  + DYL ++P+FF+R+   +E I VPH  RGTVSL +  + R R  +  LE+ 
Sbjct: 5   ESMLEENRIADYLKQHPDFFLRHKELLEEIAVPHEQRGTVSLFDVKLERQRERLQQLEDE 64

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
              L+  A  NE +F     +  +L A +S+  +    H   R+  L   +  L+ ++ R
Sbjct: 65  RQELLANATRNEFIFRVYTDVYPALFACTSMRQLWKCLHSTFRE-RLRIPACALWVNQAR 123

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
           + A        +    F+ L +  +  +  Y G +N  +  ++  +   V S+A+  LG 
Sbjct: 124 VKAKRFDKPYEMEYPLFQRLCLYPMADQLVYFGRVNDCDRELIFGQGSLVHSMALLRLGE 183

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
             + G + F   +  HYQ G  + LL ++   +  LL   
Sbjct: 184 YGEWGFLAFGHANPQHYQPGMDSLLLEQLGRFVTLLLPTL 223


>UniRef50_Q1N420 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri
           RepID=Q1N420_9GAMM
          Length = 216

 Score =  202 bits (515), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV 67
           +Q+   +L ++ V  +L ++P+FF +     E + +PH   G VSLVE+     +     
Sbjct: 1   MQQDEKQLSEKEVAAFLKQHPDFFRKFPDLTEQLDIPHDTGGAVSLVEYQSRLLKEKNTE 60

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLF 126
           L   +  L+E A  N+ LF +   L   L  A S++++        R   G+  A + LF
Sbjct: 61  LHSRLQQLIENARRNDRLFEQTRRLTLDLLDAQSIEEVEQSLQDSMRVVYGVDYACITLF 120

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAM 186
                +         A++    +   +Q  G++Q   G L+  E+ +   E   VGS+A 
Sbjct: 121 VPAMSMQ--------AVTEVEMQHQLLQHFGRKQAICGQLSDEEMELFFHEDNKVGSMAA 172

Query: 187 SMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            +L +D  LG++    R   +++    T  L  +A ++   L+  +
Sbjct: 173 CLLKND--LGILSLGHRSEEYFKSNMDTLFLDYVAEIVSRRLDILL 216


>UniRef50_Q1ZLA2 Putative uncharacterized protein n=4 Tax=Photobacterium
           RepID=Q1ZLA2_PHOAS
          Length = 234

 Score =  202 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 74/229 (32%), Positives = 107/229 (46%), Gaps = 12/229 (5%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
           G++L E    L+++AVV YL  NP FF R +  +  +R+PH  RGTVSLV+  + R R  
Sbjct: 12  GDDLNEV---LNEQAVVTYLRNNPTFFSRQSEWLSDVRIPHQERGTVSLVDIQLERLRLR 68

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLR 124
           I  LE+  A L+  A  +  L       Q  L    ++  +L      A  L L+   LR
Sbjct: 69  IAELEQQHATLLANATKSGELSVLFSNAQVQLLQCHNIYQVLTIIDALAAQLDLS-VCLR 127

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSV 184
           LF    +L        L L R+ F      RL Q++ YLG L  PE  ++      +GS 
Sbjct: 128 LFDSEDKL--------LYLERRQFNDFYRSRLTQDRPYLGRLRRPEAELLYTHPPQLGSF 179

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            +  LG  A  GV+ F S D  H+Q    T  + ++A  +  L+E W  
Sbjct: 180 IVLPLGRSAANGVLSFASADGGHFQPEMDTLFVEQLATTISYLIEHWQY 228


>UniRef50_D0Z0U0 Putative uncharacterized protein n=1 Tax=Photobacterium damselae
           subsp. damselae CIP 102761 RepID=D0Z0U0_LISDA
          Length = 240

 Score =  201 bits (511), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 4/228 (1%)

Query: 9   QETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVL 68
           Q +  EL    V  YL K P+FF R+   +  IRV H  RG VSLV+  + + R  +  L
Sbjct: 10  QASCDELSAEQVASYLRKEPDFFARHPELLSQIRVHHDERGAVSLVDIQLEKLRGQVTQL 69

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPD 128
           ++ +  L +QA  N+ LF +   LQ  L  A  L  ++    ++A+   L   S+RL  +
Sbjct: 70  QDQLEQLTDQAKRNDQLFQQFSSLQAKLMQARCLQQVMPLMEQFAQQYQL-NISIRLLAE 128

Query: 129 RWR---LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
                 L    N     L R+SF   +   + Q+  YLG L   +  +   +   +GS A
Sbjct: 129 PEAAKPLLKEINSDVAWLLRESFTQFQRSFMPQQNIYLGRLRHGQAALFFSQPPDLGSFA 188

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           +  L     LGV+ F+S +  H+     T  L ++A+++   L  W++
Sbjct: 189 LLPLKQHQTLGVLGFSSTEGGHFHPAMDTLFLQQLAIVMSSQLALWLD 236


>UniRef50_B5JX80 3',5'-cyclic-nucleotide phosphodiesterase n=1 Tax=gamma
           proteobacterium HTCC5015 RepID=B5JX80_9GAMM
          Length = 226

 Score =  200 bits (510), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 8/230 (3%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
            +   +T T LDD+ V  YL  +P+FF ++   +  +RVPHP    +SLVE  +   R  
Sbjct: 3   SDSDNKTATTLDDKTVASYLKDHPDFFDKHLDLLALLRVPHPSGDAISLVERQIDLLRQQ 62

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASL 123
              LE+ +  L+  A  N+ +   L  L + L  A SL D +       R+  GL  A L
Sbjct: 63  NRGLEDKLMELVNIARDNQRVTDHLHTLAKELVEADSLSDAVTATRDVLREQFGLEVAQL 122

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVG 182
             +         SNHT   +S+        +   + +   G +   +  +V  E +  V 
Sbjct: 123 HFYE------GVSNHTEATISQNQRIAHFGEISQERRPICGHVTPQQRDIVFGEERFQVK 176

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           S A+  L    ++G++   S D + +    G   L +++ ++   + R +
Sbjct: 177 SAALVPLYQGENIGILALGSSDEARFHPSMGVFFLSQLSALVSSSIARHL 226


>UniRef50_B5FCQ9 3'-5'-cyclic nucleotide phosphodiesterase n=3 Tax=Aliivibrio
           RepID=B5FCQ9_VIBFM
          Length = 234

 Score =  200 bits (510), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 6   EELQETL--TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARN 63
           E+ QE +  TEL +  V  +L  +P+FF ++   +  I+V  P RG VSLVE  + + R 
Sbjct: 3   EKQQEYIEPTELTEDIVAQFLTDHPDFFQKHPELLNRIKVDTPERGVVSLVEVQVNKLRG 62

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASL 123
            I  LEE +  LM  A  N+ LF+    +Q+ L  + +    +    + A +L L     
Sbjct: 63  RIGELEEEITQLMSLAAQNDRLFHEFSSIQKQLLLSENFSQAVAIIEKKAIELNLTAH-- 120

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP------E 177
                        +H    + + + +    + L     YLG L   +   +         
Sbjct: 121 -------IKIVEHSHPKYHVEQSALDNFVKKFLNGHSAYLGRLRKTDRDSLFAYGGLDLS 173

Query: 178 AKAVGSVAMSMLG-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +  +GS A+  LG S   +G++ F SRD  H+Q   GT  L ++  +   LL +W
Sbjct: 174 SSDLGSFAILPLGASSKPMGIIAFASRDGGHFQPNMGTLFLEQLVSVFHYLLTQW 228


>UniRef50_A7BTH8 Protein containing DUF484 n=1 Tax=Beggiatoa sp. PS
           RepID=A7BTH8_9GAMM
          Length = 240

 Score =  198 bits (505), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 8/239 (3%)

Query: 1   MKQPGEELQETLT-----ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVE 55
           +K P +  Q+T T     ++ ++ VV+YL + P+F  ++   +  + +P      VSLVE
Sbjct: 2   IKTPSKNFQQTKTSQQTEQISEQTVVEYLKQFPDFLTQHDELLAVMEIPSDSSKAVSLVE 61

Query: 56  WHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WAR 114
             +   R     L+     L+  A  N  L  R+ +L  +LT    +++     +     
Sbjct: 62  RKLEGLREENQQLQAKWEGLVAIAEQNAQLNQRIQHLVATLTNVEGIEEFFQTLYSTLCN 121

Query: 115 DLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV 174
           +       +R F       A S    +    Q F  L    L   +   G L+  +L  +
Sbjct: 122 EFNTDTVVIRWFELPHSPIAVSRQEFIEYDAQVFT-LFDSVLESHEPLCGQLSTEQLEFL 180

Query: 175 LPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            P++  + S  +  LGS    G+++  S DA  +    GT  L  +  ++  LL+ W+ 
Sbjct: 181 FPDS-QIASAVLIPLGSPKAQGLLVMGSHDAERFHADMGTDFLQFMGELVSHLLKLWLR 238


>UniRef50_A8TB79 Site-specific tyrosine recombinase XerC n=56 Tax=Vibrionales
           RepID=A8TB79_9VIBR
          Length = 243

 Score =  198 bits (505), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 16/236 (6%)

Query: 6   EELQETLTE-----LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           E+ +  L+E     L    V  YL  +P+F ++    V+ + VPH   GTVSLV   M R
Sbjct: 4   EDQKTQLSEVEANALTAEVVAQYLKDHPDFLVQRPELVDRLSVPHTDSGTVSLVHVQMNR 63

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
            R  I  LEE +  LM  A  N+  FY  + LQ  +   +    ++      A +LGL  
Sbjct: 64  QRQRIEDLEEEITTLMSMAANNDRTFYEFMDLQGEVLKCNDFQQVINAIEVKAENLGLK- 122

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP--EA 178
           A +RL                 LS+++++      L  +  YLG L   +   +    + 
Sbjct: 123 AYVRLLNQC--------DAATPLSKENYQRFATNHLNGKPAYLGRLRKVDREALFEGMDV 174

Query: 179 KAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             +GS  +  L     LGV+ F+S D  H+Q    T  L  ++L++  L +  + +
Sbjct: 175 PEMGSYVVLPLVKKQTLGVLAFSSEDGGHFQPDMDTLFLRHLSLVVAHLAQTLVWQ 230


>UniRef50_Q2BRF9 Putative uncharacterized protein n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BRF9_9GAMM
          Length = 228

 Score =  198 bits (504), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 7/223 (3%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           ++ +  V +YL ++P+FF RN + +E + VPH     VSL+E      R     L  +++
Sbjct: 8   QILESQVAEYLAQHPDFFSRNVKLLEKLHVPHETGRAVSLIERQTTVLREKNQNLTAHLS 67

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRL 132
            L++ A  N+  F +   +  +L  A +LDD+ +       +D      +L LF  +   
Sbjct: 68  DLIDIARHNDLQFEKTKRMVLALLEAETLDDIAVAIDESLCQDFASDSTALILFTSK--- 124

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSMLGS 191
             P +  +L L  +         +G      G L+  E   +   E+  V S A+  L  
Sbjct: 125 --PLDVNNLRLMLRDDATAISNLIGTNLPTCGRLSEVENQFIFADESVKVQSAAVIPLVQ 182

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
              LG++   S DA+++   QGT LL  +  +L  +  R + +
Sbjct: 183 GETLGLLAIGSFDANYFSSSQGTVLLSYVGEVLSRVAYRILRQ 225


>UniRef50_A4A9F1 Putative uncharacterized protein n=2 Tax=unclassified
           Gammaproteobacteria RepID=A4A9F1_9GAMM
          Length = 218

 Score =  197 bits (501), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 14/222 (6%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +D+  + D+L++NP++F +N   +  I VPH     VSLVE  ++  R+    L   +  
Sbjct: 1   MDEDDIRDFLVQNPDYFQKNPELLGLIEVPHASGAAVSLVERQVSVLRDRNVDLRHRLRD 60

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLG 133
           L   A  N+ +F     L   L  A +++++     R  RD   +  ASL LF +     
Sbjct: 61  LGSTAKDNDQMFADTRQLVLGLLPAKTVEELEGALIRVLRDIFDIEYASLTLFEEAAE-- 118

Query: 134 APSNHTHLALSRQSFEPLRIQRLG----QEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
                 H    R+  E     +LG    +     G L   +   + P A  VGS A++++
Sbjct: 119 ------HAGAVRRVPESQLKGKLGGLLVRGNAGCGALRADDFEFLFPGATLVGSAAIALI 172

Query: 190 GSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            S+   LG +   S DA HY    GT  L   A ++  LL+R
Sbjct: 173 ESNGKALGALAVGSSDAGHYDSDMGTLFLEFAAEVIAGLLQR 214


>UniRef50_Q65RL8 Putative uncharacterized protein n=5 Tax=Pasteurellaceae
           RepID=Q65RL8_MANSM
          Length = 237

 Score =  197 bits (501), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLM 76
           D  VV +L  NP+FF+++   ++ + +PH  +GT+SLVE  + R R  I  LE  +AL  
Sbjct: 11  DELVVKHLKANPQFFVQHIDLLDQLIIPHAQKGTLSLVEMQLERQRERIKELEAELALFA 70

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPS 136
           + A   + +F  L+ LQ+ L    +  + +   ++WAR+  L  A + LF D W+   PS
Sbjct: 71  DLAHQQQDIFLALMPLQKRLAQCKNFPEGVEEINKWARNFELQQAKILLFNDCWQ-KNPS 129

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSMLGSDADL 195
                 + R+ FE +R++R+G    YLG L   E  ++  PE   VGS+A  +LG   + 
Sbjct: 130 VGEEFWIDRKGFELIRLERIGLRHFYLGELTNKEKSLLFLPEELPVGSIACCLLGMKKNQ 189

Query: 196 ----GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                ++LF++RD +H+  GQ T  L  +  ++   L RW+
Sbjct: 190 HKSTALLLFSARDTAHFHNGQDTAFLKHLVSIVELHLHRWL 230


>UniRef50_B9ZNC2 Putative phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZNC2_9GAMM
          Length = 245

 Score =  196 bits (499), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 10/223 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +    V  YL  +P+FF  +   ++ +R+PHP  G VSL+E  +   R     +E++M  
Sbjct: 27  ISAGDVEAYLRDHPDFFQDHLPLLDILRLPHPAGGAVSLLERQVTLLREKHRAMEQHMGE 86

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLG 133
           L+E+A  NE +   L  L ++L  A +LD +L       R +LG    S+RL        
Sbjct: 87  LVERARDNERMGQHLHELAKTLMRAENLDAVLALTQDALRNELGAERVSIRL----ADRE 142

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
               H   +    +F+PL      + +   G + G  L V+   A  +GS  +  LG ++
Sbjct: 143 VDDLHALESSELSTFDPL----FARGKAQCGRVPGEMLDVLFDSADGIGSAILMPLGDES 198

Query: 194 D-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           D +GV+   S     +Q   GT  +  I  +L E +   +ER 
Sbjct: 199 DRIGVLGLASDSVDRFQPDMGTYFVTHIGDLLAESIRCHVERT 241


>UniRef50_Q0AFS2 Putative uncharacterized protein n=2 Tax=Nitrosomonas
           RepID=Q0AFS2_NITEC
          Length = 233

 Score =  195 bits (497), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 9/224 (4%)

Query: 16  DDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMAL 74
               VV YL  +P+FF  N   +E++  PHP  G  +S+ E  +A  R    +L+  +  
Sbjct: 3   TSEEVVQYLQDHPQFFEENPDLMESLHFPHPYEGRAISINERQVAMLREKNRLLQSRLQE 62

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLG 133
           L++    N+ +  ++  L  +L +  SL +ML         D  +   +LRL    W++ 
Sbjct: 63  LVDVGEKNDVIGEKMHRLTVALLSFDSLPEMLHGLQYHLCEDFSIPHVALRL----WQID 118

Query: 134 APSNHTHLALS--RQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSVAMSMLG 190
                  L      Q+   + I   G    Y GP    E+      +A+ + S A+  L 
Sbjct: 119 ELGTQADLPSPEFNQTSSNIHILAQGMPHPYCGPEIDDEIRQWFEMDAEYLQSFALIPLK 178

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             +  G+++  S +   +    GT  L  +  M+   + R I++
Sbjct: 179 KQSGFGLLVMASPEVERFFPDMGTLYLERLGDMVSSSITRLIQQ 222


>UniRef50_Q60AJ3 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus
           RepID=Q60AJ3_METCA
          Length = 234

 Score =  195 bits (495), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 5/223 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           ++    V DYL K+P+FF      +E++ VPHP    VSLV   +   R      +  + 
Sbjct: 13  DISASQVADYLWKHPDFFHDQLDLLESMHVPHPCGEAVSLVARQIELLRGKNRKQQGQLN 72

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            ++  A  N+ LF R   L  +L  A+S+DDML                S+R+F     +
Sbjct: 73  DILRIARENDALFARFHRLTLTLLDAASVDDMLAGLKWSLHEGFQADFVSVRVF---RTV 129

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSVAMSMLGS 191
             P+      +   +   L    L   +   G    P L  +   +A  V S A+  L  
Sbjct: 130 AHPAVGDLHVMPDPAVSILLEPLLASCEPVCGSPPEPLLEFLFGADAPDVASCALVPLCH 189

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
               G++   S DA  +    G   L ++  ++   L   I+R
Sbjct: 190 AGIKGLLAIGSFDAGRFTPEMGNLFLVQMGEIVAARLVALIDR 232


>UniRef50_B8GT90 Putative phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp.
           HL-EbGR7 RepID=B8GT90_THISH
          Length = 228

 Score =  195 bits (495), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 9/222 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           L + AV  +L  +P+FF R+   ++ +++PH   G VSL+E  +   R+    LE  +  
Sbjct: 12  LSEEAVEAWLRSHPDFFERHLALLDVLKLPHASGGAVSLIERQIGWLRDKNRQLERKLLD 71

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLG 133
           L++ A  NE L   + +L   L  A SLD +L       R +       +RL      LG
Sbjct: 72  LVQLARENERLSQHMHHLALGLMDADSLDAVLATTQEQLRTEFRADHVVVRL------LG 125

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVGS-VAMSMLGS 191
            P+   H                   +   G L+  +L  +LPEA   V S VA+ ++  
Sbjct: 126 DPAQGLHFVAEGDPALNSLESLFETRRPLCGRLSDEQLTALLPEADTPVQSAVAVPLMDG 185

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           +  LG++   SR+ + +  G GT  +  +  ++   +   ++
Sbjct: 186 NRRLGILALGSREDTRFHPGMGTLFIGYLGEIISHAVATRLK 227


>UniRef50_A6F902 Uncharacterized conserved protein, YigA-like protein n=1
           Tax=Moritella sp. PE36 RepID=A6F902_9GAMM
          Length = 241

 Score =  192 bits (489), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 3/220 (1%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           + ++ V+ +L  +P+FF+RN   V+ + + H  +G VSLV   + R R  I  LE  +  
Sbjct: 16  ISEQNVIAFLQADPDFFVRNNDLVDTLAISHGAQGCVSLVTLRLERQRQRIADLELQLQQ 75

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLG 133
           L+  A  N+ LF     +  +L   +S+  M        +  L LA  +L L    + L 
Sbjct: 76  LVAIAADNDKLFRIYADIYTALFNCTSVMQMQRILVTQIQSQLPLAAVNLHLNEAYFHL- 134

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
             S +  LA+S      +R ++     HY GP+   +  ++  +   V S+A+  LG   
Sbjct: 135 -KSQYLPLAISAGQLVRIRQKQFAGGDHYFGPVTSADKALLFGQDALVNSMALMALGERG 193

Query: 194 DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           + G++   S +A HYQ G    LL ++  ++  LL + + 
Sbjct: 194 EYGLLAIGSANADHYQAGMDNLLLGQLCRIISTLLPQLMP 233


>UniRef50_A4BTZ4 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BTZ4_9GAMM
          Length = 229

 Score =  190 bits (483), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 6/225 (2%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
           +    LD+  + +YL ++P+FF+R       + +PH VR   SL+E+ +   R+    L 
Sbjct: 4   QRAESLDEILIAEYLRRHPDFFLRQRELAAELHIPHDVRPARSLIEYQVQVLRDETARLR 63

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPD 128
             +  L+  A +N+ L  +L  L   L  A SL+ +         +   +    + L   
Sbjct: 64  ARLDELLRIARSNDRLMRQLHRLTLELLDADSLETVCDALRQSLQQSFHVDAVHIIL--- 120

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMS 187
                    +  +            + LG ++   G LN  ++ +   E A  V S A+ 
Sbjct: 121 -ITALPAQANASVWPPDHPSAARLAKLLGGDRPICGRLNDEDMRLAFGELATGVKSAALI 179

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            L   A  G++   S +  HY+  QGT  L ++  +L   ++R +
Sbjct: 180 PLADGATQGLLAIGSHNPKHYRPDQGTIFLRQLGALLERAIQRHL 224


>UniRef50_Q48AR7 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q48AR7_COLP3
          Length = 230

 Score =  188 bits (479), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 6/233 (2%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M    + +      L D  VV YL  NPEFF RN   +  +R+    RGTVSLVE    +
Sbjct: 1   MNDVQQAINSDDIPLTDELVVSYLQDNPEFFNRNNSLMTGLRLNDEQRGTVSLVERQQQQ 60

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
            R  ++ LE+ +  LM  A  NE LF     L   L    S +++L   H+   +L L+ 
Sbjct: 61  LRQKVYGLEDEITQLMSVANHNEQLFVLYSDLYLRLLDCQSAEELLDCLHQATTEL-LSL 119

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           +S +L+      G  +   H +LS      +   RL  +++Y G L   E  ++  +   
Sbjct: 120 SSFKLWLVS---GNNTEVAHHSLSTNDCAGVMQNRLTNDEYYFGRLQESEQTLIFSK-PC 175

Query: 181 VGSVAMSMLGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           +GSV +  L  D   +G +   S DA H+     T LL++   ++ +LL + +
Sbjct: 176 LGSVVLIKLTHDEQAVGFLAIGSEDAHHFDPRMDTLLLNQFKRLVAKLLHQQL 228


>UniRef50_A4SRX0 Putative uncharacterized protein n=2 Tax=Aeromonas
           RepID=A4SRX0_AERS4
          Length = 226

 Score =  187 bits (476), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 101/209 (48%), Gaps = 6/209 (2%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           EL+     +D+  V++YL + PEFF R+A  ++ IR+PH  +G+VSLVE  M R R  I 
Sbjct: 3   ELKRQEPLVDEATVLEYLARYPEFFQRHAAMLDRIRIPHERKGSVSLVERQMDRQRERIE 62

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRL 125
            LE+ +  LM  A  NE +F     L   L    SL ++     + + + L L G  L L
Sbjct: 63  QLEQEITELMGIASENERIFRVYADLYGELYGCQSLFEVSAVMGKAFVQRLRLTGLRLWL 122

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
            P +++L  P          +  E L  QRL  + +Y G LN  E   +      V SVA
Sbjct: 123 SPKKFQLSGP--ELRFMADGKQLEQLLGQRLPGQDYYFGRLNQSEKQALFGHDVLVNSVA 180

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGT 214
           +  LG    LGV+ F S D SH+     T
Sbjct: 181 LMRLGD---LGVLAFASSDPSHFSPHNDT 206


>UniRef50_C3X4I5 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes
           RepID=C3X4I5_OXAFO
          Length = 225

 Score =  186 bits (473), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 12/223 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           +D   V  YL+ +P+FF  +A  +  +R+  PV G TVSL E  +   R+    LE  ++
Sbjct: 5   IDSNTVAQYLVDHPDFFETHADILPGLRLTSPVIGKTVSLHERQIEVLRSKHKALELQLS 64

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
            LM  A AN+ L  ++L     L    +   M        +   G+   +LRL+  R   
Sbjct: 65  RLMHAAQANKTLMEKILDWTCPLLKEQNDAAMPQTIVSGLQSVFGIPAVTLRLWNIR--- 121

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEAKAVGSVAMSMLGS 191
                +     ++ + E +R    G    Y G +    E +  L  A  + SVA+  L +
Sbjct: 122 ---PEYADSWFTQHASEDIRNAANGMSHPYCGKVPENQEAVKWLDHAAEIRSVAIVPLKT 178

Query: 192 DA---DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
                  G+++  S DA+ +Q    T  L +I  +    L+  
Sbjct: 179 GPESLPFGLLVMGSPDATRFQNDMATDFLDDIGKLASAALDHL 221


>UniRef50_B8KSV2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium
           NOR51-B RepID=B8KSV2_9GAMM
          Length = 232

 Score =  184 bits (468), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 7/223 (3%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           +     T+LD  AV  +L+ NP FF+++   +  + +PH    TVSLVE  ++  R    
Sbjct: 9   KPSPVETDLDHAAVEAFLLDNPHFFMQHPGVLAELELPHGESSTVSLVERQVSLLRERNI 68

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLF 126
            +   +A + + A AN+ LF     L  +L     + ++   F       G++ A    F
Sbjct: 69  EMRRRLAQINQWAKANDVLFAATRTLVLNLLEVRDVGEIKSTFDS-----GISNAFEAQF 123

Query: 127 PD-RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
               W   A +    L         L +  +  +Q   G L   E+  +  EAK  GS  
Sbjct: 124 GALHWLPAAATLDPELNSLDTESSNLILSLVKHQQSLSGVLRAEEMTALFSEAKGEGSGV 183

Query: 186 MSMLGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
           ++ L  + + +GV+   S D + YQ   GT  +  +A ++  L
Sbjct: 184 VTPLRHNDEIIGVIAVGSHDTARYQSDDGTLFIDHLAEVIVRL 226


>UniRef50_A0Y9E1 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0Y9E1_9GAMM
          Length = 231

 Score =  184 bits (467), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 5/222 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           ++ +  V  +L  +  FF+++   +  + + H     VSL+E  ++  R     + + + 
Sbjct: 12  DITEEQVAHFLKSHSGFFLKHDDLLVDLTLAHDSGHAVSLLERQVSLLRERNVDMRDRLN 71

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRL 132
            L++ A  N  LF +   L  +L  A SLD ++  F      D  +  +S+ LF D  + 
Sbjct: 72  SLLDSAKTNGHLFEKTKQLVLALIDAQSLDAIVNTFNRSLLSDFVVDFSSMTLFGDAAQ- 130

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
               +     +   +        L       G L   EL  +  E A  + S A+  L  
Sbjct: 131 --HDSTLSRMVPVDTAYATIPGLLKSNGTTAGVLRPEELQFLFSEQADQISSAAVVALNH 188

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
              LGV+   S+D  H+    GT  L  IA +L  +L + ++
Sbjct: 189 TKPLGVLAIGSKDPDHFSSDMGTLFLEYIAEVLNRVLPQHLQ 230


>UniRef50_C5S7I3 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM
           180 RepID=C5S7I3_CHRVI
          Length = 230

 Score =  184 bits (467), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 13/230 (5%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M Q    L E L    +R VVDYL+ +P+F  R+   + AI VPH ++G VSL+E+ +  
Sbjct: 1   MHQAEHSLDEALDP--ERQVVDYLMAHPDFLARHPEVLSAIEVPHGIQGAVSLIEYQVRL 58

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLA 119
            R  +      +  L+ +A  NE L  RL  L   L      + +         R+    
Sbjct: 59  LRRQLATERNRLVHLIARARRNEALAIRLHGLILQLMVVKDPEHLCHLLRETLLREFHAE 118

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-A 178
             + +LF        P  H  +A +   F       + +     GPL+    + +  E  
Sbjct: 119 ALAFKLFARATLESRP--HDPVANAFADF-------IDRRNALCGPLSSERAVALFGEGG 169

Query: 179 KAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
             + S A+  + +D   G++   S DA+ +    GT  L+ +  ++ + L
Sbjct: 170 TGIHSAAIVPIHADGQSGIIAIGSADATRFSPEMGTDFLNRLGEIISQKL 219


>UniRef50_A3YDJ8 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3YDJ8_9GAMM
          Length = 223

 Score =  182 bits (461), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG--TVSLVEWHMARARNHIHVLEENM 72
           + +  V+++L  NP+FF  +   +E + VPH +    TVSL+E  +   R      +   
Sbjct: 1   MTEANVIEFLKANPKFFHEHLDLLEMMDVPHALEANNTVSLIERQVFLLRKSAEDYKSQF 60

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWR 131
             L+  A  NE + ++   L  +    +SLD+  +      R D  +   SL LF D   
Sbjct: 61  ERLVHVARENEAIMHKSRRLVLASMGCASLDEFAIMLDDAMRDDFNIKLHSLVLFSD--- 117

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML- 189
              P +      +    EP+  + L +   Y G L+  E   +  + A  V S A+  L 
Sbjct: 118 --LPLDTNIRVTAMADAEPVLKEVLLKTGCYCGALSVAEAKYLFEDKADQVMSSAVLPLV 175

Query: 190 ----GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               G+D  +G++   S +   ++Q +G   L  ++ +L  +L R + 
Sbjct: 176 SHYQGADKYIGMLALGSDELEKFKQEKGVLFLEYLSDILSAILIRLLP 223


>UniRef50_C7R6T1 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM
           16069 RepID=C7R6T1_KANKD
          Length = 225

 Score =  180 bits (457), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 7/216 (3%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLM 76
           ++ +  YL ++PEFF  +   ++ +R+ H V G+VSLVE  +   RN    L+  +  L+
Sbjct: 14  EQEIALYLEQHPEFFENHQDLLDKLRLQHKVYGSVSLVERQILGLRNKAEKLQTQLNTLI 73

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAP 135
           + A +N  L  +   L  ++ ++ S  +M+ R     RD   L    L LF D   L   
Sbjct: 74  DNAHSNGDLLNKCAELFVAMISSHSTQEMIDRLLEHLRDNFELDNVQLWLFDDSGTL-HH 132

Query: 136 SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADL 195
            N++ + + RQ  +    Q   Q     G +    +  +      + S ++  LG ++ +
Sbjct: 133 VNYSDIQMIRQLTD----QHFIQNDPICGRVTES-ISQLFGGDHELESYSIIPLGENSRV 187

Query: 196 GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           G++   S+D   +    GT  L  I  +    L++ 
Sbjct: 188 GIIALGSKDVDLFTADMGTLFLRLIGDVTEACLDKQ 223


>UniRef50_B4S2D8 Uncharacterized conserved protein, YigA-like protein n=3
           Tax=Alteromonadales RepID=B4S2D8_ALTMD
          Length = 231

 Score =  179 bits (455), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 13/221 (5%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
           + L    V  +L++NPEFF +    +E I++PH  +G+VSLVE    + R  +  L   +
Sbjct: 21  STLSSTDVHAFLLENPEFFAQYPDLLEKIKLPHEHKGSVSLVEIQSDQLRQKVRQLNFKL 80

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWR 131
             L+  A  NE ++     L   L    S+ ++        ++ L L+ A ++ F     
Sbjct: 81  NQLVTIAKQNEKIYRVYTDLNVQLLRCESVAEVQFTLEDVLQERLQLSSAVIKSF----- 135

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
                 H    L ++ F     +R      + G L+  E  ++  E+ A  SVA+ +LG 
Sbjct: 136 ---KGPHAIPELQQRLFT---EKRFKNTNFFFGRLSQHERQLLFGESPA-ESVALMLLGD 188

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           + DLG++  +S DASH+     T LL ++  +L  +L   +
Sbjct: 189 NRDLGILGISSSDASHFTPDMDTLLLQQLQQVLNIILPEMM 229


>UniRef50_Q5QUS7 Uncharacterized conserved protein, YigA-like n=2 Tax=Idiomarina
           RepID=Q5QUS7_IDILO
          Length = 231

 Score =  179 bits (455), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 7/205 (3%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LDD  + +YL +NP+FF RN   +  ++  H  +G VSL+E    + R  +  LEE +  
Sbjct: 13  LDDSLIREYLQENPDFFTRNDDLLAQLQFQHSEKGAVSLIERQQQKLRLRVQQLEEEITE 72

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLG 133
           LM  A  NE +F     L  SL    SL  +L      +  +L +   SL+ F     LG
Sbjct: 73  LMINARRNEAIFSAYSNLYVSLLRCQSLSQVLDELQNTFENELEMPALSLKFFDSPVDLG 132

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
                   + +  + + L  +R  +   YLG L   E  ++  + + + SVA+ +LG + 
Sbjct: 133 -----EQYSFASDTHKKLLSKRFNESSIYLGRLTEQEHKLLF-QDEEIASVALLLLGDNG 186

Query: 194 DLGVVLFTSRDASHYQQGQGTQLLH 218
           +LG++   + +ASH++      L++
Sbjct: 187 ELGMLAVGNTNASHFEPAMDKLLIN 211


>UniRef50_Q088K7 Putative uncharacterized protein n=21 Tax=Shewanella
           RepID=Q088K7_SHEFN
          Length = 246

 Score =  179 bits (454), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 21/220 (9%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
             D+  + +YL+ NP+FF R    + A+RVPH  RG VSLVE      R  +  LEE + 
Sbjct: 46  PFDEMLIREYLLDNPDFFNRYPELLVAMRVPHAERGAVSLVERRQELLRQRVSQLEEEIT 105

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRL 132
            LM  A  NE +F     L   + A+  L ++ +        + G +   L         
Sbjct: 106 SLMNIATHNEKIFKFNTELSFKMLASQDLGELRLVLSEGLKNEFGFSHVRL--------- 156

Query: 133 GAPSNHTHLALSRQSFEPLRIQR-LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
                   + +     E  +I R   Q  +Y G L   E   +      VGSVA++ L  
Sbjct: 157 --------ITVHDIDSELAKIWRHRVQSGYYFGRLTQSESKRLFG--SEVGSVALTKLSD 206

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +    +    S D +H+     + L  ++  +L  +L + 
Sbjct: 207 ENGQVIFAIASNDPTHFHPDMDSLLFSQLRRLLDHMLPKM 246


>UniRef50_Q47JM9 Putative uncharacterized protein n=2 Tax=Betaproteobacteria
           RepID=Q47JM9_DECAR
          Length = 223

 Score =  177 bits (450), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 10/228 (4%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEE 70
           ++ +    + +YL  NP FF + A  +  I VPHP  G  VSL E  M   R      E 
Sbjct: 1   MSAMFPEEIAEYLKNNPSFFEQYADLMAQIFVPHPHGGRAVSLAERQMLTLREKNRSTES 60

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDR 129
            +A L+     N+ +  ++  L  +L AA +   ++   +   R D  +   +LRL+   
Sbjct: 61  KLAELIAFGEENDQISEKVHRLSVALIAAETFQAVIHLLNFHLRDDFSVPHVALRLWDKP 120

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSM 188
             +        ++   Q F           + Y G   G        E A  + S A+  
Sbjct: 121 EEIEGLPEFAAVSEELQVFAE------TLARPYCGSTAGFGTASWFGEHASHIRSQALIA 174

Query: 189 LGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           L +    +G++   S DA  +    GT  L  +  M+   L R  + V
Sbjct: 175 LRNGGGTIGMIALGSEDAQRFYADMGTLYLERLGEMVSAALARVTKSV 222


>UniRef50_A1K307 3',5'-cyclic-nucleotide phosphodiesterase n=3 Tax=Rhodocyclaceae
           RepID=A1K307_AZOSB
          Length = 217

 Score =  176 bits (447), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 12/223 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG--TVSLVEWHMARARNHIHVLEENM 72
           ++   V  YL  NP+F  ++      + VPHP  G   +SL E  +   R+ I  LE  +
Sbjct: 1   MNPNDVARYLRDNPDFLAQHGELFTELTVPHPQHGGQAISLAERQLYALRDKIRQLESKL 60

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDM-LMRFHRWARDLGLAGASLRLFPDRWR 131
           A L+     N+ +  ++  L  +L  A     +    F+    D  +   +LRL+     
Sbjct: 61  AELIRFGEENDDISEKVHRLAVALLGARGYAAVRQALFNCLQEDFAVPHVALRLWDVGGE 120

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML- 189
              P             E  R+  L       G     E++    E A  + S+A+  L 
Sbjct: 121 GTGPDFDA-------VSEAARLHALDLRHPSCGAPGSIEIVGWFGEAAPHIRSMALMPLR 173

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                +GV+   S +   +    GT  L  IA +    L R +
Sbjct: 174 RQGETVGVLALGSEEGERFYPEMGTLYLGRIAELCAAALLREL 216


>UniRef50_A6T2Z5 Uncharacterized conserved protein n=72 Tax=Burkholderiales
           RepID=A6T2Z5_JANMA
          Length = 222

 Score =  176 bits (446), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 11/226 (4%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEEN 71
           + LD   V DYL+ NP+FF  +A  +  I++   + G T+SL E  M   R  + V+E  
Sbjct: 3   SPLDSNTVADYLLDNPQFFEEHAELLSRIKLSSALGGRTLSLQERQMDVLREKLKVMELR 62

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRW 130
           +A LM     N+ +  +     R+L  A +  D+        +    +   +LRL+    
Sbjct: 63  LAELMRIGQENDQITRKFHTWTRALLQARNDVDLPHTLTTGLQSAFSVPHVTLRLWGVSE 122

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
                     ++   + F        G    + G  N  E    L +A A+ SVA+  L 
Sbjct: 123 AFAHTWFAAPVSADSRLFSN------GLTTPFCGSNNDFEAASWLEDAPAIQSVALLPLR 176

Query: 191 SD---ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            D      G+++  S D   +     T  L  I       L   ++
Sbjct: 177 LDDATEAFGLLVLGSPDPHRFTSDMATDFLTNIGQTASAALSGMLD 222


>UniRef50_A6W1A9 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W1A9_MARMS
          Length = 221

 Score =  173 bits (439), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 20/219 (9%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           + +  V+ YL K P+FFIR+A  +E++ +PHPV G  VSL+E+ +   R           
Sbjct: 1   MSEEEVIQYLSKTPDFFIRHADLLESLTLPHPVNGKVVSLLEYQVNLLRKTTADYRAQFE 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRL---FPDR 129
            L+E A  NE    +   L  +    S+LDD+ +      R D  ++  +L L   FPD 
Sbjct: 61  RLVEVARENESTMQKSRRLVLAGLTCSTLDDLAVIIDDMVRDDFEVSHHALVLFGEFPDS 120

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSM 188
                      + LS  +         G    + G L   E+  +   +A ++ SVA+  
Sbjct: 121 AVRSHKLVEDDVFLSHAA---------GFTDCFCGMLPANEMSFLFLDDAPSIRSVAVLP 171

Query: 189 L-----GSDADLGVVLFTSRDASHYQQGQGTQLLHEIAL 222
           L     G     GV++  + + S +++ +G   L  +A 
Sbjct: 172 LLSREGGEVRKCGVLVLGAENKSAFEKEKGALFLQYLAD 210


>UniRef50_UPI0000E105BC Uncharacterized conserved protein, YigA-like n=1
           Tax=Rhodobacterales bacterium HTCC2255
           RepID=UPI0000E105BC
          Length = 221

 Score =  173 bits (438), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 90/215 (41%), Gaps = 18/215 (8%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M QP  +  +T   L  + V  YL  N EFF+        + +PH  RGTVSLVE    +
Sbjct: 1   MTQP--DFSQT---LSAKEVAQYLRDNEEFFVEYPELTAELIIPHQQRGTVSLVELQAEQ 55

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLA 119
            R  +H   + +A L+  A  NE LF     L + L    +L D+    H  +  +L LA
Sbjct: 56  LRKQLHSQRQELAALIRNADNNEQLFQIYAQLLQRLYTCDTLVDVEAALHACFHGELALA 115

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
              ++LF    R     +H            L  +R  Q   + G L+  E   +  E  
Sbjct: 116 EVCVQLFIKETRFADFKHHA-----------LIDKRFKQSDFFFGRLSQNETKQIFNEGS 164

Query: 180 AVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGT 214
            V S A+ +LG+    G +   S  A+H+Q    T
Sbjct: 165 -VESCALMLLGAKEPFGFLAVGSASATHFQPEMDT 198


>UniRef50_C6WT35 Putative uncharacterized protein n=1 Tax=Methylotenera mobilis JLW8
           RepID=C6WT35_METML
          Length = 230

 Score =  171 bits (434), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 17/226 (7%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENMA 73
           +    V DYL  +P FF +NA  +  I +P+P   G +SL E      R+ I V+E  MA
Sbjct: 9   ISAEDVKDYLRNHPSFFEKNATLLTEITLPNPHGSGVISLTERQQIAQRDKIRVIEAMMA 68

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLF--PDRW 130
            ++  A  N+    ++  L   L    S   +          D  +    +R++  P   
Sbjct: 69  QMIVHAEENDATSAKVHKLSVKLLNQQSFSALQTLIAETLKLDFAVTEPLIRIWVKPSNS 128

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
            +   +  TH++      +      +   Q Y G    PE++  L ++K + S  +  LG
Sbjct: 129 AIIQDAVFTHVS------DAFNEWVMSLTQPYCGA--KPEVMGDLVDSK-LQSFVIIPLG 179

Query: 191 ----SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                    GV++  S D   ++ G GT  L  I  ++   L   +
Sbjct: 180 KIAADQRPFGVLILGSSDKDRFKAGMGTMYLEHIGELVATALLNHL 225


>UniRef50_Q1H4W9 Putative uncharacterized protein n=2 Tax=Methylophilaceae
           RepID=Q1H4W9_METFK
          Length = 229

 Score =  168 bits (427), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 6/221 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENM 72
           ++ +  V+ YL  +P+FF  +   +  + +P P   GTVSL E      R+ I VL+  +
Sbjct: 11  QVTEYQVMSYLRAHPQFFEHHTGLLAELYLPSPHGQGTVSLAERQQLAQRDRIRVLDAKL 70

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
           A LM+    N+ +  ++  L   L A   ++ ++    H    D  +   SLRL    W 
Sbjct: 71  AQLMKYGEENDAIGEKVHRLSLGLLATERMEVLVSLLEHSLHEDFQVPYVSLRL----WA 126

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
               S +  L +     + L+    G    Y G   G  L           S A+  L +
Sbjct: 127 KPRESGNGSLPIFASVDQELQRWAQGLATPYCGNRPGMPLQGWFGVEARPASFAVMALKA 186

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
               GV+   S D   +    GT  L  I+ ++   L R I
Sbjct: 187 QQVFGVLALASDDDKRFYPDMGTLYLKRISELISAALLRHI 227


>UniRef50_A1WWB4 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila
           SL1 RepID=A1WWB4_HALHL
          Length = 236

 Score =  167 bits (424), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 83/225 (36%), Gaps = 7/225 (3%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LD+  V  YL ++P+   R+   +  + + H      SL+E  +   R     L   +  
Sbjct: 13  LDEAEVAAYLAEHPDLLHRHPELLARLELRHDCGDATSLIEHQVRVLREESAGLRRRLDD 72

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLG 133
           ++  A  NEG   RL  L   L AA  L   +       R+        L L       G
Sbjct: 73  MVRVARQNEGTAERLHELTLDLFAADDLQAAVEALRAGLREGFQADAVGLLLIAPEAAGG 132

Query: 134 APSNHTHLALSRQSFEPLR---IQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML 189
               H  +     + +P        L + +   G     ++  + P+   AV S A+  +
Sbjct: 133 E--THAPIPEILDAGDPALTCFRPLLERGRPSCGTPTEAQVRTIFPDTETAVASAALVPM 190

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             +  +GV+   S D   Y  GQGT  L  +      +L+R + R
Sbjct: 191 IDERAVGVLGIGSSDPQRYHPGQGTVFLRRLGTTAARVLDRLLHR 235


>UniRef50_C6MFM7 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212
           RepID=C6MFM7_9PROT
          Length = 235

 Score =  167 bits (423), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 9/220 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPV-RGTVSLVEWHMARARNHIHVLEENMA 73
           +    V  YL ++P+FF + A  +  +++ HP     +SL E  +   R    VL++ + 
Sbjct: 1   MKPEEVAQYLQEHPQFFNQYADLLADLQICHPQDEKVISLNERQIIALRERNRVLQDKLL 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            L+     N+ +  ++  L  +L + S++D++    +     D  +   ++RL+      
Sbjct: 61  ELISFGEENDAIGEKMHRLVIALLSVSNIDELFHALYFSLKEDFAIPLVAMRLWNVANVT 120

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
            + +  T ++      E +R       Q Y G     E+     E A+ + S AM  L +
Sbjct: 121 KSHAEFTPVS------EDVRTIAESLPQPYCGNHIADEIKQWFGEGAEHLNSFAMIPLNT 174

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              +G+V+  S DA  +    GT  L  +  ++   + R+
Sbjct: 175 ARTIGLVVLGSPDAERFYTEMGTLHLKRLGELVCTTVTRY 214


>UniRef50_C7RPB7 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1 RepID=C7RPB7_9PROT
          Length = 217

 Score =  164 bits (415), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 10/223 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           +    V  YL  NP+FF  +A  V  + VPHP  G T+S+ E  M   R+    LE  M 
Sbjct: 1   MKAEEVAHYLQNNPQFFELHADLVANMVVPHPHSGRTISITERQMLALRDKNRQLEGKMG 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRL 132
            L++    N+ +  ++  L   + AA S   +L   +   R D  +   ++RL+      
Sbjct: 61  ELLQFGEENDEISQKMHRLAVGMIAARSFQAVLHTLNLHLRDDFDVPHVAVRLWRHPEGN 120

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVGSVAMSMLGS 191
                   ++   Q+F             Y G  +G E      EA   V S A+  +  
Sbjct: 121 DDLPEFAEVSQELQAFAE------TLTLPYCGSTSGFETSSWFGEASLHVRSQALIAMRD 174

Query: 192 DAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               +G++   S D   +    GT  L  +  M    L R + 
Sbjct: 175 GGGTIGMIALGSEDLERFYTQMGTIYLERLGEMASAALARVLR 217


>UniRef50_C1D8P9 DUF484 domain containing protein n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1D8P9_LARHH
          Length = 214

 Score =  163 bits (413), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 16/223 (7%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENMA 73
           +   A+  +L +NP+FF ++   +  +RVP P + GT+ L+E  +   ++    L   MA
Sbjct: 1   MTPEAIAVWLTRNPDFFEKHPDVLAELRVPAPRQEGTIPLIEKQVRVLKDKTRQLNAAMA 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            LM    +N+ +      L   L  A+S++ ++         D  + G  L L+      
Sbjct: 61  QLMAYGESNDQIVAATHRLALHLMRATSVETVMAAVRASMDDDFAVTGWQLGLW------ 114

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
                H   A    S +PL +     E   +G    PE++  LP+ A A  S A++ L +
Sbjct: 115 -----HPQAAGHGLSRKPLPLSARALESPVVGHYLPPEMMAWLPQTADAWQSFALAALKN 169

Query: 192 --DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                 G ++  S     +     T+LL +IA ++    ER +
Sbjct: 170 PAGEAFGALILASESEHRFSPDMETRLLADIAELIAAAFERVL 212


>UniRef50_A0Z3C5 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2080 RepID=A0Z3C5_9GAMM
          Length = 236

 Score =  163 bits (412), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 7/219 (3%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEE 70
           +   L+   V  +L+ +P+FF      +EA+ +PH   G++SLVE  +A  R     +  
Sbjct: 14  SPETLNADDVELFLMHHPDFFEGRKELLEALEIPHGGAGSISLVERQVAALRERNIAMRS 73

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDR 129
           ++A L   A  +E +      +  +L   S +  +         D  G+  AS       
Sbjct: 74  HLAELTHNAETSESILEATQQMILALLQCSEVSGLKPTIEAGLLDFFGVEYAS-----HV 128

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
           W   A              + +    L +++ Y G     E+L + P   + GS A++ L
Sbjct: 129 WLSAASEAFGEGVACETDRQDIIETLLRRQRAYCGVFRADEMLAMFPGCDSEGSAAIAPL 188

Query: 190 G-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
             ++  +G +   S D   Y    GT  L  +A ++  L
Sbjct: 189 HLNNVLIGAIGVGSSDVHRYDSSVGTLFLEHLADVIMHL 227


>UniRef50_C7HXH1 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12
           RepID=C7HXH1_THIIN
          Length = 223

 Score =  162 bits (409), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 13/228 (5%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENM 72
           EL +  +  YL  NPEFF R+A  +  +++  P     VSL E  M   R+ +  LE  +
Sbjct: 2   ELSEHDLAAYLAANPEFFERHAELLTTVQLQSPHGNRAVSLQERQMEMLRDKMRTLEHRL 61

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASS--LDDMLMRFHRWARD-LGLAGASLRLFPDR 129
           A +M  A+ NE L  +LL   R +  A     + +        +    L   +L+++P R
Sbjct: 62  AAMMRNAVDNETLAGKLLLWARDVMLAQQGAPEQLPQTLQDTLKSAFDLPMTALKIWPVR 121

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
               A    T ++   ++F             ++GP  G E    LP+A+   S+A+  L
Sbjct: 122 EAFAALDFATGVSEDAKTFAA------SLAAPFVGPNPGFEAAHWLPDAQMAQSLALVPL 175

Query: 190 ---GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
               +   +G+++  S D+  +    GT  L+ I+ +    L   + R
Sbjct: 176 QNPHTSMCMGLLVLASPDSQRFTADMGTDFLNHISQLASAALVGLLVR 223


>UniRef50_Q1QSV0 Putative uncharacterized protein n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QSV0_CHRSD
          Length = 239

 Score =  159 bits (403), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 12/229 (5%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPV-RGTVSLVEWHMARARNHIHVL 68
           E  T LD   V  +L ++P+FF+     ++ ++VPHP  +G +SL+E  +   R      
Sbjct: 8   EPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDLRERAETA 67

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFP 127
           E  +  L+E A  NE  + R   L  +L  + S+D +         +       +L L P
Sbjct: 68  EWRLEHLLETARHNEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQAVALWLEP 127

Query: 128 --DRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE---AKAVG 182
             D   L  P        +R +F+ L      +       L       +LP        G
Sbjct: 128 GTDGATLQPPRFALDTP-TRAAFDELLDGHNSR----CTRLPRDTWQHLLPHTTPPDQHG 182

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           S A++ L     LG +L  S+++ H++    T     +  ++  LL R 
Sbjct: 183 SCAVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRL 231


>UniRef50_Q0VM17 Putative uncharacterized protein n=2 Tax=Alcanivorax
           RepID=Q0VM17_ALCBS
          Length = 241

 Score =  159 bits (403), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 83/224 (37%), Gaps = 2/224 (0%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
           T      V  YL  + +FF      +E +R+P P    VSL+E   A  R     L + +
Sbjct: 5   TPASADQVATYLRDHADFFQHRPELLELLRLPDPKGEAVSLLERQAAILRERNTELRDRL 64

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWR 131
             L++ A  N+ LF +   L  +L  A   + +        + D      +L L+     
Sbjct: 65  NGLLDVARENDHLFDKTRRLTLALLEARGPEKLFRNLLTSLSSDFHCDQVALMLYDREVP 124

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLG 190
           +     +    +   +        L   +   G +   E+  +  + A  + S AM  L 
Sbjct: 125 ILGDLRNQIRCVDSDALPSALNHLLRSGKAVCGAMRTEEMDALFQDNATDIRSAAMVPLE 184

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
               LG++   S+ A H++   GT  +  I  +L   L   + +
Sbjct: 185 YQGRLGLLAIGSKSAMHFRSSLGTLFISHIGQVLSRRLHEVVRQ 228


>UniRef50_Q2Y5Y9 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis
           ATCC 25196 RepID=Q2Y5Y9_NITMU
          Length = 232

 Score =  158 bits (401), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 9/216 (4%)

Query: 18  RAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALLM 76
             + +YL  NPEFF  +A  +  I+VP+P  G  +SL E  +   R    +L++ +  L+
Sbjct: 19  EEIAEYLRANPEFFEAHASMLADIQVPNPHDGRAISLSERQILALREKNQILQDKLEELI 78

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAP 135
                N+ +  ++  L  SL A   L D+L       R+   +  + LR++        P
Sbjct: 79  LFGKENDAIAEKMHKLAVSLLAFRRLPDLLDGLTFALRESFLVPHSVLRIWNIGIDGPLP 138

Query: 136 SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGSDAD 194
                ++    +     +        Y GP    E+     E A+ + S AM+ L  D  
Sbjct: 139 PEFLPVSSEVHAMAENLL------HPYCGPHVPDEIRSWFGEQAEHLRSFAMTALHGDQT 192

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           +G+++  S ++  +    GT  L  +  +    L+R
Sbjct: 193 IGLLVMGSEESQRFYPEMGTVYLGRLGELASASLKR 228


>UniRef50_A9IH30 Putative uncharacterized protein n=5 Tax=Bordetella
           RepID=A9IH30_BORPD
          Length = 225

 Score =  157 bits (398), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 83/226 (36%), Gaps = 14/226 (6%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLE 69
           T T    + V D+L  NP+FF ++A     ++VPHP     +SL E  +   R     LE
Sbjct: 2   TDTAFTAQDVADFLQNNPDFFDQHAEVFATLQVPHPHGARAISLGERQILTLRERNRELE 61

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPD 128
             +  L   A +NE +  R+      L   +    +        A    L   +LRL+  
Sbjct: 62  WRLNELAHHADSNEAIGERVSQWCCRLLGEAEPQHLPGEIALGLAEQFDLNHVALRLWNL 121

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSM 188
             +  +      ++   ++F          +  Y GP    E    L       S+A+  
Sbjct: 122 PGQPPS-GYGEPVSADVRAFAD------SLKAPYCGPDTEFEAAGWLDAKP--RSLALVP 172

Query: 189 LGSDAD---LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           L  D D   +G+++  S D   +    GT  L  I  +    L R 
Sbjct: 173 LRLDPDQPSVGLLVLGSDDPERFTPEMGTVFLEAIGRLASATLRRL 218


>UniRef50_A4B9F2 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297
           RepID=A4B9F2_9GAMM
          Length = 223

 Score =  155 bits (391), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 7/217 (3%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           E+ +  VV YL ++P FF  +   ++ + + H     +SL+E      R     L + + 
Sbjct: 9   EITENDVVRYLKQHPGFFEDHPNLLKKLHLRHDSGEAISLIERQNQILRKENTDLIDRLN 68

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
             +  A  N+ LF  L  L   L A  SL+D+    +    +   +    + +       
Sbjct: 69  RFIHVAQRNDKLFLNLQTLVLKLLACRSLNDICKTLNTELTERFDVDQVQVVMCHRLTTD 128

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML-GS 191
           G    +      +  F         +     G        ++  +   + S+A+  L   
Sbjct: 129 GDMWLYCDTNTLQTHFPAAMRDARNE----CGEFTEQTRHLLFAD-TDIQSLAVGALTKD 183

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           D  +GV+   S+DA H++ G  T  L  +A+++ +LL
Sbjct: 184 DKGVGVIALGSKDAKHFRSGTDTLFLGHLAMVVSQLL 220


>UniRef50_Q2PYI2 Putative uncharacterized protein n=1 Tax=uncultured marine
           bacterium Ant4D3 RepID=Q2PYI2_9BACT
          Length = 237

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 3/220 (1%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
            L+  AV  YL +NP+FF + +  +  I + H      SL+E      R  I    + M+
Sbjct: 15  PLNADAVASYLRQNPDFFNQRSSLLADIELAHDCGQATSLIERQTQVMRQKIKDNADRMS 74

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRL 132
            ++  A  N+  F +   L  +L AA++L+D+       +  +       L +F      
Sbjct: 75  DILTTARRNDVQFEKTKRLVITLAAAANLNDLTEALKQSFIGEFHADAVHLAIFSGLNVT 134

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQ-HYLGPLNGPELLVVLPEAKAVGSVAMSMLG- 190
                 +      ++     I+ L      Y        +  +      + S A+  L  
Sbjct: 135 DTHPCLSSAEDPEENTYNAEIKALASNNWAYCQDFKVTSMSHLFVHHSKLKSSAIVPLYL 194

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           +D  LGV++  S  A HY     T  L+ +A +    L R
Sbjct: 195 ADQPLGVLIIASNCADHYSDQLDTLFLNHVAAVTGRCLGR 234


>UniRef50_B2SMW7 Putative uncharacterized protein n=20 Tax=Xanthomonadaceae
           RepID=B2SMW7_XANOP
          Length = 226

 Score =  150 bits (379), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 79/227 (34%), Gaps = 7/227 (3%)

Query: 6   EELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHI 65
           E + E   +     V  +L ++P F  +      ++ VP     T SL  + +   R+  
Sbjct: 2   ERMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKN 61

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLR 124
             L   +  L   A  NE L  R   L  +L   +S  D L       A D       L 
Sbjct: 62  RELSRRLQELGSNAQENERLAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLV 121

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGS 183
           L      L A  +   +  +  +        L   +   G L   +  ++   +A  V S
Sbjct: 122 LLKPVDALDA--DWLQIIATDDARLAPFSDCLSDGEPICGRLQADKHALLYGAQAGEVQS 179

Query: 184 VAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            A+  L     +G++   S DA+ +  G GT  L  +   L   L R
Sbjct: 180 TALLPL---PGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHR 223


>UniRef50_Q0ACL8 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii
           MLHE-1 RepID=Q0ACL8_ALHEH
          Length = 232

 Score =  148 bits (374), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 5/231 (2%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           +      +L D  V  +L  +P+F +R+   +  + + H     VSL+E  +   R+   
Sbjct: 2   QQTNPEPQLTDEDVAAWLEADPQFLLRHPGVMRRLELRHDCAPAVSLIERQVQLLRHDNE 61

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRL 125
            L   +  L+  A  N+ +  RL  L   L  A +L  ++       R+       +L L
Sbjct: 62  RLRAELKDLLAVARYNDRIGARLHQLTLELMRADALGAVVEALRAGLREGFQADAVALLL 121

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSV 184
             +  + GA                     +   +   G +   +L  +    A  + S 
Sbjct: 122 LGEPEQAGALPV--PCLPEDDDRLACLNSFIMDRRPRCGRMQPEQLERLFGTSAARINSA 179

Query: 185 AMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           A+  L ++  + G++   S  A  + +GQGT  L ++  +  E L     R
Sbjct: 180 AIVPLIAERGVQGLLGIGSHLADRFHEGQGTVYLGQLGSLAGEALAAHRRR 230


>UniRef50_A1WRJ5 Putative uncharacterized protein n=19 Tax=cellular organisms
           RepID=A1WRJ5_VEREI
          Length = 243

 Score =  146 bits (368), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 15/232 (6%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRV--PHPVRGTVSLVEWHMARARNHIHVLEEN 71
            + +  +  +L++ P FF R+A+ + ++++  PH  R  VSL E      R  I  LE+ 
Sbjct: 12  PITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGAR-AVSLQERQAEMLREKIKGLEQR 70

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRW 130
           +  ++  +  N  + ++L     +L        +        R    +  A+LRL+    
Sbjct: 71  IMEMVRNSTDNATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQAALRLWGLEG 130

Query: 131 RLGAPSNHTH---LALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE--AKAVGSVA 185
             G             S+ + +  R         + GP  G E  + L +       S+A
Sbjct: 131 LEGLDGMGEPGIDARFSQGASDDARALASSLTMPFCGPNLGFEPALWLAQQAGDPAASLA 190

Query: 186 MSMLGSDA------DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +  L   A        G+++  S D   +    GT  L  IA +    L R 
Sbjct: 191 LLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALLRL 242


>UniRef50_C0N8U6 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N8U6_9GAMM
          Length = 236

 Score =  140 bits (352), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 5/223 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
            L +  +  YL  +P+ F++  + +E + +     GT+SL +  + R +     L E + 
Sbjct: 7   TLTNADIEQYLQDHPDLFLQQPQLLELLELNASPEGTISLAQRQLQRLQEKNQQLNEQLH 66

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRL 132
            L++ A +N  L  R+  L   L  A  L  ++    +  + +      +LRLF    + 
Sbjct: 67  ALIDNAHSNNELQQRVHALCLRLLDAPDLKSVIDALVKELKHEFSADDVALRLFYSADKP 126

Query: 133 GA-PSNHTHLALSRQSFEPLRI--QRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSM 188
              P    ++A      + LR     L ++Q   G L   +  ++   +A  + SVA   
Sbjct: 127 QELPKLSANVAQLHADDKKLRSFDNLLSKQQPVCGRLTKAQKQILFSGQADQIQSVACLP 186

Query: 189 LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           LG +   G++   S DA+ +     T  L  +  +   +L ++
Sbjct: 187 LGHEPCAGLLAIGSHDANRFHADMATDYLSFLGEVFMRILRQY 229


>UniRef50_Q3IDS1 Putative uncharacterized protein n=2 Tax=Alteromonadales
           RepID=Q3IDS1_PSEHT
          Length = 203

 Score =  138 bits (348), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 21/220 (9%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
           ++EL+ + VVDYL  +P+F I++   +  + +    +G  SLV     + R H  +L+  
Sbjct: 1   MSELNAQQVVDYLQHHPDFLIQHPELLAQLELQQQAQGATSLVHIQQRQLREHNTLLKNQ 60

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +A + + A  NE ++       + L + +  D +        +D+  +   +        
Sbjct: 61  IASMNKYAAQNEQVYRLFSLCHQQLCSNNDFDALASNL----QDIICSNPDI-------- 108

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
                +   L      +  L   RL    HYLG +N  E  ++  +     S A+ ++G 
Sbjct: 109 -----SDCRLVKYDTKYAQLVEHRLSNSGHYLGRINQQERDLLFSD--TAQSTAIYLIGD 161

Query: 192 -DADLGVVLFTSRDASHYQQGQGTQL-LHEIALMLPELLE 229
            +  + ++ F S +A+H++  Q T   L  +  +   LLE
Sbjct: 162 INKPIAILAFASNNANHFEPAQDTLFVLDFVVALQSRLLE 201


>UniRef50_Q31IM1 Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena
           XCL-2 RepID=Q31IM1_THICR
          Length = 223

 Score =  136 bits (343), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 6/226 (2%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIH 66
           +   + ++    V +YL +N EFF      +  + +PHP  G  VSL+E  + + R    
Sbjct: 1   MSSLINDIHAEDVANYLNRNREFFHVFPNLLNELSIPHPKSGHEVSLLERQVFQLREQRD 60

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRL 125
            L+  +  L + A  N  L +++  L  +L AA S  + +   +    D   +   ++  
Sbjct: 61  SLQVEVDTLKDIAGENGALLHKVYDLSYALLAAESEQEAVNVVYDVMHDVFTVEEVTIIS 120

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
           +          N   ++   Q++     + L   +   G L       +    KA+ SV 
Sbjct: 121 WEVPKSSVHGVNQLGIS---QAWSQSLKETLQPGKPVCGLLEDSWQKGLFHTDKAMQSVC 177

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +  LG     G +   +     +    GT  L  +  M+   L+R 
Sbjct: 178 VIPLGQQRVWGALALGAT-TDRFSPELGTYFLKVMGQMVTARLQRL 222


>UniRef50_C5V603 Putative uncharacterized protein n=2 Tax=Gallionellaceae
           RepID=C5V603_9PROT
          Length = 208

 Score =  135 bits (341), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 84/223 (37%), Gaps = 20/223 (8%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           ++   V  YL+  PEFF  +   +  I + HP  G T+SL E  +   R    VLE+ M 
Sbjct: 1   MNSEDVAHYLLNTPEFFEDHLDTLAQITLAHPHGGRTISLGERQLLALREKNKVLEKQMY 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
            ++E A  NE L  ++     SL AA  L  +        RD   +   ++ L+      
Sbjct: 61  EMLEFARENEALQNKVHEFTVSLFAARDLTTLQEMIPHLLRDIFSVPHVAMHLWQ----- 115

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
             P +   L  + +           Q +         +      E A  + S A   L +
Sbjct: 116 VTPPSMEVLMFTDE-----------QSKPVCLHQAAHDTASWFGESASLLHSFAYLPLHA 164

Query: 192 DA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            +  +G+++  S +   +    GT  L  IA      L  +++
Sbjct: 165 GSVSVGLLVLASEEKQRFYPEMGTVFLQRIADAAGSALHPYLD 207


>UniRef50_Q7NV17 Putative uncharacterized protein n=2 Tax=Chromobacterium group
           RepID=Q7NV17_CHRVO
          Length = 216

 Score =  134 bits (337), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 11/213 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +    V+ +L ++P+F  ++A        P      +S VE  M   ++    LE  +  
Sbjct: 1   MHSEQVLAFLDEHPDFLQQHAARYGLQAAPQNGERVISFVERQMLELKDQNRQLEAQLQQ 60

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLG 133
           L+++   N+ L  RL  L  +L AA     ++       +R+  L  ++L+L+       
Sbjct: 61  LIDRGQDNDRLLARLHRLTLALLAARGPGKLIAELQGGLSREFQLDRSALKLWHPAAEKD 120

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS-- 191
           A   +            ++         Y GP    E+L   P    + S A   L    
Sbjct: 121 AEHYNAR--------SEVQGLARNLVAPYCGPYVNDEVLSWFPATPVLQSFAQVALKDAA 172

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALML 224
               G+++  S D   +     TQ L +I  ++
Sbjct: 173 GQPFGILVLASDDPQRFTFDMHTQYLAQIGELV 205


>UniRef50_A6GU47 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105
           RepID=A6GU47_9BURK
          Length = 216

 Score =  126 bits (316), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 81/219 (36%), Gaps = 20/219 (9%)

Query: 19  AVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTV-SLVEWHMARARNHIHVLEENMALLME 77
            V D+L  +P+F I+N   +  I++P    G V SL E  +   R  +  LE  +  +  
Sbjct: 7   QVADFLKAHPDFLIKNPGILAFIKLPEQSTGNVASLHERQVQTMREKVKSLEHRVVEMTH 66

Query: 78  QAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRLGAPS 136
            A+ N+ +   L  + R+L    +  D+         +   +    L+L+ +     + S
Sbjct: 67  AAVENQAIIDNLQSITRTLLTVKNSADLPTVLVDAIKKKFVVPMVRLQLWSEDNSAASNS 126

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLG-PLNGPELLVVLPEAKAVGSVAMSMLGSDA-- 193
           + T +               G +  Y G   N P L V   E  A  SV +  L   A  
Sbjct: 127 DKTLID--------------GMKSLYCGFSENAPTLSVFQGEEVAPRSVVLIPLRIGASP 172

Query: 194 -DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              G + F S D   +     T  L+ +A      L R 
Sbjct: 173 VTFGCLGFGSPDKDRFSPTLETDFLNTLAETACAALSRL 211


>UniRef50_C6NUR3 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus
           ATCC 51756 RepID=C6NUR3_9GAMM
          Length = 229

 Score =  118 bits (297), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 9/226 (3%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPH-PVRGTVSLVEWHMARARNHIH 66
           + ET  + D + V  +L K+PEF       +  I +PH  +    SL+E  +   R    
Sbjct: 1   MSETPRDDDAQQVRAFLRKHPEFLWTEEELLTEITLPHLGLGSASSLLERQVQALRQENL 60

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLF 126
           +L++ +A L+  A  N  L   L  L  +L  A     ++    R   ++       ++ 
Sbjct: 61  LLQQRIAALLGAAQQNAVLARHLSDLAMALLRAQDCIAVVELTRRHLSEV------FQVE 114

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVG--SV 184
              W +         A++ ++     +  +       G    P+L   L EA   G  S 
Sbjct: 115 QQAWLVAHSDFPVTGAVALEAERSRPLLAMAIAGARTGLELHPDLRRRLFEAPGAGLRSF 174

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           A+  L      G ++  S+    Y    G+ LL +I  ++   L+R
Sbjct: 175 AIIPLDGSCLSGGIVLGSQHPDRYGADAGSDLLEQIGRLVSAALDR 220


>UniRef50_B9NJT9 Predicted protein (Fragment) n=2 Tax=cellular organisms
           RepID=B9NJT9_POPTR
          Length = 662

 Score =  117 bits (293), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 11/173 (6%)

Query: 25  IKNPEFFIRNARAVEAIRV--PHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIAN 82
             +P+FF  +A  +  +++  PH  R  VSL E  M   R     LE  +A L+     N
Sbjct: 273 KSHPQFFEDHAELLATVQLTSPHSHR-AVSLQERQMEILREKNKGLELKLADLVRHGHEN 331

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTHL 141
           +    R+   Q  L A +    +        +    +    LRL+           + H+
Sbjct: 332 DRTQQRMHDWQMRLLAEADSHALPYAVRDGLQQVFDVPAVGLRLWSVG------ETYAHM 385

Query: 142 ALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
            +++ + + LR+   G    + G   G E   +L E   V S+AM  L   A 
Sbjct: 386 EVAQGASDDLRLFAEGLRAPFCGANAGFEAAQLL-ERDDVASLAMVALRVPAK 437


>UniRef50_A4T0G4 Putative uncharacterized protein n=2 Tax=Polynucleobacter
           necessarius RepID=A4T0G4_POLSQ
          Length = 224

 Score =  116 bits (290), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 70/222 (31%), Gaps = 26/222 (11%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALL 75
           +  V ++L   P FF R A     IR+ HP     +SL E  M   R     L   ++ +
Sbjct: 12  EELVAEWLRVTPGFFERYADLFNEIRIKHPHEDRAISLQERQMTVLRTQNQELNRRLSEM 71

Query: 76  MEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGA 134
           +     N+     L+     L  A++  D+         +   +  A L      +    
Sbjct: 72  LHFGSRNDKTQQSLVAWLLRLMKANNKADVEAAITSGLSEVFEVESAQLLSPNSAF---G 128

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
           P   T L  S +      +  L  +                       S+    L     
Sbjct: 129 PWVDTPLCGSAKELAAASVDLLASQTTI---------------DPEWQSMVAIGLPLGKS 173

Query: 195 L------GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           L       V+L  S+D S +    G   L +IA +    L+R
Sbjct: 174 LDASQSPAVLLLASKDESRFTADMGAFYLRQIAELTAAALDR 215


>UniRef50_A8TIN7 Site-specific tyrosine recombinase XerC n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TIN7_9PROT
          Length = 245

 Score =  110 bits (276), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 13/229 (5%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWH---MARARNHIHV 67
            L EL    +VDYL  +P+F + +   ++ +  P    G V  +++    + R ++    
Sbjct: 19  DLKELTADRIVDYLKNHPDFLVEHPDLLQILTPPRREAGNV--IDFQHAMVQRLKSENDK 76

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLF 126
           L+     L+  A +N+ +  R+     ++  A S + M+       A  L +   ++ + 
Sbjct: 77  LQTAQDYLVVTARSNQSIQSRVHDAVLAILRAPSFESMIHTVTSELAVQLDVDAVTIGV- 135

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ-HYLGPLNGPELLVVLPEAKAVGSVA 185
                   P    + A  R   E      LG+ +   L      +  +    A  V S A
Sbjct: 136 ---EAGDVPIPKAYAAGIRALPEGAVDGILGRGRDVVLTSNITGDPRLFGAAAGLVRSQA 192

Query: 186 MSMLGSD--ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           ++ L +   A +G++   SR    +  GQGT+LL  +A  L  ++ +W+
Sbjct: 193 LTRLRASTQAPVGLLALGSRRPDGFIAGQGTELLGFLARSLEIMIRQWL 241


>UniRef50_B5ENS3 Putative uncharacterized protein n=2 Tax=Acidithiobacillus
           ferrooxidans RepID=B5ENS3_ACIF5
          Length = 227

 Score =  107 bits (267), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 73/225 (32%), Gaps = 6/225 (2%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVL 68
           E   E     V+ YL ++P+F       +  + +PH  RG   SL+E      R     L
Sbjct: 4   EPELETQADQVLAYLRQHPQFLWDQEDLLHTLTLPHVGRGSASSLLERQAQVLREENLRL 63

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFP 127
            + ++ L+  A  N  L   L  L   L         +       R+   +   +L    
Sbjct: 64  HQRISALLGAAQQNAALGLHLSDLATELLQTPDCTTTVNTVITRLREGFQVEEMALIARA 123

Query: 128 DRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMS 187
               L            ++    L + R          L      +       + S A+ 
Sbjct: 124 PVAGLPQFLPLEQADF-QEILNGLPLLRAATGLALSPTLRS---TLFGAAGAGLASFALI 179

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            L      G +L  S+    Y +  G  LL +IA ++   L+R +
Sbjct: 180 PLAGRHLQGGILLGSQHPDRYAEDAGADLLDQIARLVTAALDRCL 224


>UniRef50_A4CFE2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CFE2_9GAMM
          Length = 203

 Score =  105 bits (262), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 86/222 (38%), Gaps = 20/222 (9%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
           +++LD   + +YL  +P+F ++    ++A+ + H   G +SL      R +  +   ++ 
Sbjct: 1   MSQLDANEIAEYLALHPDFLVQFPELLDALNLYHNQPGAISLQSHQQKRLQQQLQQQQQQ 60

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +  L+  A  +E ++       R L    +  D+            L     +L      
Sbjct: 61  LNTLLAHARKSEQIYQVFSSCHRHLMLHDNFADLASNLVSLISA-NLDICECKLLKYEPY 119

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
           L +   H                RL  +  YLG +N  E  ++        SVA+ ++G 
Sbjct: 120 LASIVTH----------------RLANQPRYLGRINQQEQALLF--NNECQSVALYLIGD 161

Query: 192 DA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
               L ++ F S+D  H++  Q +  ++E    L   L  W+
Sbjct: 162 AQTPLAILAFASKDPIHFEPSQDSFFINEFVKALHTKLSGWV 203


>UniRef50_B6IPE1 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IPE1_RHOCS
          Length = 236

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 9/225 (4%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVP--HPVRGTVSLVEWHMARARNHIHVLEEN 71
           +L    V  YL ++P+F +++   +  +  P  H   G   +  + + R R  +  L + 
Sbjct: 13  DLTAEDVAAYLREHPDFLVQHPDLIGHLTPPALHRGDGVADMQFFMLQRLRGEVGRLSDQ 72

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRW 130
              L+    AN     R+      L  ASS + ++       A  L L  A+L +     
Sbjct: 73  QRELIATTRANLNNQNRVHAAALFLLDASSFEHLIQTITTDLAVLLDLDVAALAVESQVP 132

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
            +G  +      L       +    LG+    L         +  P A  V S A+  L 
Sbjct: 133 EIGLAARTGLKLLEAGDIGTI----LGRRDVLLRDNVVGAPEIYGPAAALVRSEALVRLR 188

Query: 191 --SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
              D   G++ F SR+   +  GQGT+LL  +A ++   +  W++
Sbjct: 189 LSGDGPQGLLAFGSREPDMFHPGQGTELLTFLARVMERCIRSWLD 233


>UniRef50_C5JAZ1 Conserved uncharacterized protein n=1 Tax=uncultured bacterium
           RepID=C5JAZ1_9BACT
          Length = 237

 Score =  100 bits (249), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 14/232 (6%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
            LD   V  +L ++P FF  +   + +           S+    + + R       E + 
Sbjct: 6   TLDPEHVYHWLREHPTFFQDHPDLLPSAI--TASGRVFSIEAGKLDQLRRQNEQTREQLE 63

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
            +M++   NE +++    +Q +L  A  L +++        +   ++  ++ L      L
Sbjct: 64  EMMQRIRHNEEIYHAFHRVQMALLNAGELAELVRAATAGLEETFAISRVTIALCDGPEGL 123

Query: 133 GAPSNHTHLALSRQSF---EPLRIQRLGQ-EQHY--LGPLNGPELLVVLPEAKAVGSVAM 186
           G         L  + F        Q LG   Q    +G       L        + S A+
Sbjct: 124 GLTRERRPFVLEDRLFLLDAASIAQALGSPPQPVIRVGQEGANRHLFFGSRGGEIRSEAL 183

Query: 187 SMLGSDAD-----LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
             L   +      LG +       + +     T L+ ++A ++   L + I 
Sbjct: 184 IPLVMRSGEEVRLLGSLNLGGTVPNRFLPHYSTDLVQDLADVITLCLRKMIP 235


>UniRef50_Q2VZB9 Uncharacterized protein conserved in bacteria n=3
           Tax=Magnetospirillum RepID=Q2VZB9_MAGSA
          Length = 239

 Score = 98.1 bits (243), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 84/223 (37%), Gaps = 8/223 (3%)

Query: 16  DDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHM---ARARNHIHVLEENM 72
           D+R V+ +L  +P+F +R+   + ++  P    G   +++  +    R R+ +  +    
Sbjct: 18  DERQVMAFLQAHPDFLVRHPDLLLSLSPPSRWGGEDGVLDMQVFMIDRLRDEVERVRGAA 77

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
             L+  + +N  +  R      S+  A ++ +++          L +  A+L        
Sbjct: 78  EHLIHTSRSNMSIQTRTHRAVLSILGADNMAELVEAVSDDLPALLDVDVATLCFEESDEV 137

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML-- 189
           L        L+L   +   +           L      +  +    A  V S A+  L  
Sbjct: 138 LPELRAPGILSLPVGTVAGIMGG--PDRDCALTEEMPGDPALFGDGAGLVQSSAVVRLSP 195

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           G  +  G +   SR    +  GQ T+L+  +A ++   + R++
Sbjct: 196 GGKSPDGAMALGSRHGRTFHAGQATELITFLARVVEGSVRRFV 238


>UniRef50_D0L0D3 Putative uncharacterized protein n=1 Tax=Halothiobacillus
           neapolitanus c2 RepID=D0L0D3_HALNC
          Length = 240

 Score = 96.5 bits (239), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 67/234 (28%), Gaps = 39/234 (16%)

Query: 16  DDRAVVDYLIKNPEFFIRN----------------ARAVEAIRVPHPVRGTVSLVEWHMA 59
           D+ AV  +L +N  F   +                   +  I++P P  G  SL    + 
Sbjct: 19  DNTAVTLFLQQNHGFLAEHCQTNLRSVLEDLLASTPTLLTEIKLPSPPDGVASLPHIQLR 78

Query: 60  RARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAA--SSLDDMLMRFHRWARDLG 117
             R  +  L   +  L   A  N  L   L      L      + + +    H   +   
Sbjct: 79  ILRERLERLTHQINQLRFTAEDNARLDQVLHDFASDLLRTPQRTPEQLRTLLH---QHFT 135

Query: 118 LAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP- 176
           +    L    D    G               + +    L       G LN  +  ++   
Sbjct: 136 VDAVELLRMTDISAQG---------------QQILRGWLDSRTPLCGRLNEAQRELIFDT 180

Query: 177 EAKAVGSVAMSMLGSD--ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
                GS A+  +G++      ++         +   QGT  L +I  +    L
Sbjct: 181 HFPDTGSAALIAVGNNLAEPDWILALGRHAPDGFNPTQGTLFLRQIGDLAAAFL 234


>UniRef50_A0L4T5 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1
           RepID=A0L4T5_MAGSM
          Length = 274

 Score = 93.8 bits (232), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 93/256 (36%), Gaps = 34/256 (13%)

Query: 8   LQETLTE-LDDRAVVDYLIKNPEFFIRNARAV-EAIRVPHPVRGTVSLVEWHMARARNHI 65
           +Q+ +TE L ++ V DYL+ NP FF  N   +  AI V       +SL    + + R   
Sbjct: 21  IQQAMTEPLSEKQVRDYLLDNPSFFNENGDLLPSAINV---SGRVLSLEAGQLNQLRQEN 77

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAA--SSLDDMLMRFHRWARD-LGLAGAS 122
             + E +  +ME+   N+ +++    +Q+ L       +  ++ RF +   D   +   +
Sbjct: 78  TRIREQVDHIMERIGQNDAIYHAFHTIQKGLLVEMGQDVATLINRFCQSLEDTFNIYRVA 137

Query: 123 LRLFPDRWRLGAPSNHT-------------HLALSRQSFEPLRIQRLGQEQHYLGPLNGP 169
           L L  D      P  H               + +   +     I   G+    +G   G 
Sbjct: 138 LTL-SDSAPALLPLRHAMQSNPALAGALMGRVHIMPHAELIKVIGHTGRSVIRVGREGGD 196

Query: 170 ELLVVLPEAKAVGSVAMSMLGS------------DADLGVVLFTSRDASHYQQGQGTQLL 217
                  +A  + S A+  + +               +  +       + +  G  + LL
Sbjct: 197 RTPFFGMQAGQIKSDALIPIFNPPLDLLPIESPTPEPIASLNLGGESTNRFLPGYSSDLL 256

Query: 218 HEIALMLPELLERWIE 233
            ++  +   +L+R +E
Sbjct: 257 QDMTDIFVLILDRTLE 272


>UniRef50_B4RB98 Putative uncharacterized protein n=4 Tax=Caulobacteraceae
           RepID=B4RB98_PHEZH
          Length = 227

 Score = 91.9 bits (227), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 80/230 (34%), Gaps = 23/230 (10%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTV-----SLVEWHMARARNHI 65
           T   L    V  +L  NPEF   +   +  + +       V     +L   H A  R   
Sbjct: 9   TAQALSPDEVRRFLSDNPEFLREDDGLLAELGLKVAAGNVVDFGPAALARVHAAHQR--- 65

Query: 66  HVLEENMALLME-QAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASL 123
              E  M  L+E  A AN     +       L  + +  D+  R    AR   GLA   +
Sbjct: 66  ---EAEMRQLLEETARANFSAQAQTHGAVVDLLDSRNHSDLARRVDELARTRFGLAAGLI 122

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGS 183
            L  +        +     +      P R+ R+G     LG        +       +GS
Sbjct: 123 ALEVEGAPPAGWRHLVDGQVDMILGGPQRLARMGFAPTALG--------LFGDVGPEIGS 174

Query: 184 VAMSMLG--SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +AM  +     +  G++ F S D   +    G++L+  +A ++    ERW
Sbjct: 175 MAMVRMAIWEPSRTGLLAFGSADPEGFTPDMGSELVAFLARVVERTAERW 224


>UniRef50_C0N6Q6 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
           RepID=C0N6Q6_9GAMM
          Length = 358

 Score = 89.2 bits (220), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 9/176 (5%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGA 121
            +I  L+  +  L+  A +NE         + +L  + SL ++        ++   L   
Sbjct: 2   QNIATLQTRLDELLRIAKSNERKQDNFQQYELALLNSGSLHELFSIILDQHKERFQLTEV 61

Query: 122 SLRLFPDRWRLGAPSNHT------HLALSRQSFEPLRIQRL-GQEQHYLGPLNGPELLVV 174
           +L L+   + L                L          Q    Q++  L   +  +   +
Sbjct: 62  TLLLYDPEYELRRLVETKTGKHSWRNRLLFTETAQFISQYFSPQQKPRLVTFSSHQHTFL 121

Query: 175 LPEAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLE 229
            P+   +GSVA+  L   +  +G +   SR+ S +Q   GTQ L  +A ++   +E
Sbjct: 122 FPDHDQLGSVALLPLIRQNQLIGSLNLGSRNPSRFQSNIGTQFLSHLAAVVSACIE 177


>UniRef50_Q0AKV4 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10
           RepID=Q0AKV4_MARMM
          Length = 225

 Score = 88.8 bits (219), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 9/222 (4%)

Query: 16  DDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALL 75
           D   + ++LI NP+F   +A     I       G + L      + R+ I  L+     +
Sbjct: 11  DTDMIREFLISNPDFVREDAELFSLIVETDRDDGAIDLGAAARDKLRHEIRQLKSLNESI 70

Query: 76  MEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRLGA 134
           +E A AN     ++     +L  A SL  +  +  +R    LG+    + +         
Sbjct: 71  VETARANLATQSQIHMAVLALLEAESLAGLDKKMSNRLTGALGVDVCRVLI-------EG 123

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGSDA 193
            +          +        LG     LGP++      +  +    V S A+  L  + 
Sbjct: 124 HAPVQAAESILGAASGFVGDVLGDHVELLGPVDPANAHALYGQQGARVSSQAIVRLDFNG 183

Query: 194 DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
             G++   +RDA  +Q GQGT+LL+ +A  +  ++ +W+ + 
Sbjct: 184 QDGLMALAARDAHLFQSGQGTELLNFLARAVERMVVQWLHQT 225


>UniRef50_Q0F1F2 Sensory box protein n=1 Tax=Mariprofundus ferrooxydans PV-1
           RepID=Q0F1F2_9PROT
          Length = 372

 Score = 81.5 bits (200), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 4/184 (2%)

Query: 55  EWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR 114
           +    +  +    L+  +A +M++   NE LF RL  L+  +  A+  +D+     R  R
Sbjct: 15  DRRFEKMADENRELKSYVAEVMQRLRQNEMLFSRLFELESQVLKAADPEDLCFTLLRGLR 74

Query: 115 D-LGLAGASLRLFPDRWRLGAPSNH-THLALSRQSFEPLRIQRLGQEQHYLGPLNGPELL 172
               L      L    +  G   +  +   L     + +      ++  +L  L+  +  
Sbjct: 75  SGFDLDLVRFWLDRSSFMGGHKLDGLSDRDLVWVEKDEITGMGFSRKPVWLIQLSSEKPF 134

Query: 173 VVLP-EAKAVGSVAMSMLGSDA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           V L  +   +GS+A+  LG+     GV+   S D   +   Q +  L  +A ++   +E 
Sbjct: 135 VWLQTQDSHLGSLALLTLGNPEHPFGVLGLGSVDRDRFAPDQSSDFLQHLAQVIGLTMEH 194

Query: 231 WIER 234
            + +
Sbjct: 195 AVAQ 198


>UniRef50_B0T3E1 Putative uncharacterized protein n=1 Tax=Caulobacter sp. K31
           RepID=B0T3E1_CAUSK
          Length = 226

 Score = 80.7 bits (198), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 74/229 (32%), Gaps = 22/229 (9%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTV-----SLVEWHMARARNHI 65
              ELD   V D+L   P F   +   +  + +       V     +L    ++ A    
Sbjct: 9   PRQELDAAFVRDFLRAEPGFLHEDPDLLSDLGLRPDASNVVDFGPAALA--RVSAAHERE 66

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLR 124
            ++   +      A AN     +       L  A +  D+  R    A    GL    + 
Sbjct: 67  ALVRRQIE---ATARANFSAQAQTHAAVIDLLDARNHSDLARRVDEMAILRFGLTAGVVV 123

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSV 184
           L     R+ A  +         +     + R+G     LG        +       + S+
Sbjct: 124 L-EGPGRVPAGWHALIEGQIDMTMGDHGVARMGFHAPALG--------LFGDRIDQIKSM 174

Query: 185 AMSMLG--SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           A+  +     +  G++ F S D   +    G+ L+  +A ++    ERW
Sbjct: 175 ALVRMALWEPSRQGLLAFGSADPEGFTADMGSDLVAFLARVVERTAERW 223


>UniRef50_A7HT45 Putative uncharacterized protein n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HT45_PARL1
          Length = 246

 Score = 80.4 bits (197), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 85/240 (35%), Gaps = 15/240 (6%)

Query: 3   QPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWH---MA 59
              + + +    L    V  YL +NP+    +   + A+  P    G  ++V+     + 
Sbjct: 8   TEAKRMDDIGAALAADEVKAYLRRNPDLLTDDPDLIAALVPPSQSTG-RNVVDMQQFMIG 66

Query: 60  RARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR---WARDL 116
           R +NH+ +L +  + L+E +  N     ++      L  A S + ++         AR L
Sbjct: 67  RLQNHVRMLRDIQSDLIEASSLNSLAREQVHAATLKLLDARSFEHLIEYTTSPDGLARVL 126

Query: 117 GLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRI-QRLGQEQHYLGPLNGPELLVVL 175
           G+  A+L +       G       +         L   +R     H  G        +  
Sbjct: 127 GIRAATLCIETANSVSGIGIRGVRVLEPGGVDRILGTGERCKLAPHVRGS-----RGLYG 181

Query: 176 PEAKAVGSVAMSMLGSD--ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
             A  V S A+  L     +  G++     +   +   Q   LL  +A ++   + +W++
Sbjct: 182 NMADDVHSEALVRLDFSPVSPPGLLALGGFEPDQFHPDQAVDLLEFLADVVERCVRQWLD 241


>UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
           RepID=B8GMH9_THISH
          Length = 370

 Score = 80.4 bits (197), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 60/178 (33%), Gaps = 7/178 (3%)

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWA-RDLGLA 119
            +N    L   +  L+ +A  NE    R   L+  L AA+ L +++        R   L 
Sbjct: 5   LQNENRELRRQLRELLSEARENERKLDRFQALELRLVAATGLAEIISLLSSALPRASRLD 64

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
              L L      +G       +       E     RL     YLGP              
Sbjct: 65  HMGLLLSDISGEIGLELAEAGIIPVPGQLELNPPVRLP-TGVYLGPYEPQRHGRYCAGRT 123

Query: 180 AVGSVAMSMLG-----SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            +GS+AM  L          LG ++F SRD   Y  G  +  L  +A +    +E  +
Sbjct: 124 DLGSIAMLPLRRSADMQSEPLGTLVFGSRDPGRYGLGVDSFFLERMAAITAVCIENAL 181


>UniRef50_A4G925 Putative uncharacterized protein n=2 Tax=Herminiimonas
           arsenicoxydans RepID=A4G925_HERAR
          Length = 362

 Score = 79.6 bits (195), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 8/177 (4%)

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM-RFHRWARDLGLAGAS 122
               L   + LL+EQA  N+ +  R          A++  +++   F        L   +
Sbjct: 8   ENSQLRSQLKLLLEQAHRNQQIMQRYQEFDLKFIGANTFQELIDSVFDTLTEASELDVVT 67

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQS-----FEPLRIQRLGQEQHYLGPLNGPELLVVLPE 177
           L L      +        + +S         E +        +  LG  N  +   + P+
Sbjct: 68  LSLIDPDAEIRRILTDLRIDVSDYPNLIFIAESIDEMAHPARKASLGIYNSMQHRRLFPD 127

Query: 178 AKAV-GSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                 SVA+  L   +A +G +   S DA+ +  G  +  L   A ++   +E  I
Sbjct: 128 TVLKPSSVAILPLIRRNALIGWLSLGSLDATRFTSGMASDFLQHRASIVAICVENVI 184


>UniRef50_O31086 Orf235 (Fragment) n=11 Tax=Enterobacteriaceae RepID=O31086_SERMA
          Length = 63

 Score = 78.0 bits (191), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/55 (67%), Positives = 47/55 (85%)

Query: 180 AVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            +GSVA+SMLG D +LG+V+F+SRD  HYQQG GT +L+++A MLPELLERWIER
Sbjct: 8   QIGSVALSMLGDDGELGMVIFSSRDTQHYQQGMGTVMLNQLARMLPELLERWIER 62


>UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthinobacterium sp.
           Marseille RepID=A6T2S6_JANMA
          Length = 352

 Score = 78.0 bits (191), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 10/175 (5%)

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM-RFHRWARDLGLAGASLRLF 126
           +   + LL+EQA  N+ +  R          A+S  +++   F        L   +L L 
Sbjct: 1   MRTQLKLLLEQAHRNQQIMQRYQEFDLKFIGANSFQELIDSVFDTLTEASELDVITLSLI 60

Query: 127 PDRWRLGAPSNHTHLALSR-------QSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
                +    +   + +S        +  + +        +  LGP N  +   + P+  
Sbjct: 61  DPAAEIRRILSDLRIDISDYPNLLFVEDKDGVGEIAHPARKPALGPYNTMQHKRLFPDTV 120

Query: 180 AV-GSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
               SVA+  L   +  +G +   S D + +     +  L   A ++   +E  I
Sbjct: 121 LKPASVAILPLIRRNTLIGWLSLGSLDPTRFTANMASDFLQHRASIVAICVENVI 175


>UniRef50_C0DT94 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
           23834 RepID=C0DT94_EIKCO
          Length = 216

 Score = 76.1 bits (186), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 10/200 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           ++++ ++ YL ++PEF + +A     + V        S  +      +     +   +A 
Sbjct: 1   MNEKKILAYLQEHPEFLLNHA---ADLGVRPAEGRVQSFAQAQWLAQQKKAAKMAGQLAQ 57

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWRLG 133
           +M+ A +N     R+L   R L AA++L  +L      W  D  L    + L  +  + G
Sbjct: 58  IMQDADSNHQTLGRMLGFVRRLLAANTLLQVLRAAEAGWQEDFALPSGRVWLLAEPPKKG 117

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLG-PLNGPELLVVLPEAKAVGSVAMSMLG-S 191
           A S    L                 ++   G  +    +  +  E + + S  +  L  +
Sbjct: 118 AVSGAYRLP----ENHAAHAALSALKEPLCGNRIAPALMKALPQEGRGLESFLLLPLRVN 173

Query: 192 DADLGVVLFTSRDASHYQQG 211
              + V++    D + +   
Sbjct: 174 GQTVAVMVAGDADETRFTPD 193


>UniRef50_B5JXR4 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015
           RepID=B5JXR4_9GAMM
          Length = 387

 Score = 76.1 bits (186), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 18/181 (9%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRW 130
           +A L+ +A  NE     L  ++  L  A S   +       + R   L   +L L     
Sbjct: 33  LATLLREARVNEEKLIHLQAMEVKLLNADSFYQVCDILIEDYRRQFNLRAVTLTLVDRGG 92

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQ-------------HYLGPLNGPELLVVLPE 177
           +L    +       +   E L       +                +GP+      ++   
Sbjct: 93  QLKEFLDENQPQ-EKADRERLEQHVFFVDDYEDIKGLQTLPRVPTIGPVEDAHRDLLGDY 151

Query: 178 AKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER--WIER 234
            +   S+A+  L   D  +G +   S D S Y Q   T  L  ++ ++   ++    +ER
Sbjct: 152 YEDAESLALLPLVRRDELIGFLTLASVDPSRYTQDMATDFLERLSSIVAVCVQNAIHLER 211

Query: 235 V 235
           V
Sbjct: 212 V 212


>UniRef50_B2JML9 Diguanylate cyclase with GAF sensor n=6 Tax=Burkholderia
           RepID=B2JML9_BURP8
          Length = 418

 Score = 74.6 bits (182), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 15/179 (8%)

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWA-RDLGLAGASLRLFP-- 127
            +  L++    NE    R   ++  L  A     +      +  R+ GL    L L    
Sbjct: 65  RLRALVDTVQRNERTLRRFQDVELHLIRAQDFQALCSVLFDYLPREFGLERVMLWLNDTL 124

Query: 128 ------DRWRLGAPSNHTHLALSRQSFE--PLRIQRLGQEQHYLGP---LNGPELLVVLP 176
                     +  P+  +       S E      +   Q + +LG    ++      +  
Sbjct: 125 PLLHEMASRHVTPPTAGSPAGSLNTSRETGDAATRLCAQGRPWLGACASMDDAARDALRA 184

Query: 177 EAKAVGSVAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
                 S+A+  L ++  L G +   S +AS +  G  T +L   A+++   L+    R
Sbjct: 185 GDMPAASIALLPLAANGLLSGYLCLGSDNASRFAAGMATDMLERFAVIVAASLDNVAHR 243


>UniRef50_C5A928 Diguanylate cyclase n=1 Tax=Burkholderia glumae BGR1
           RepID=C5A928_BURGB
          Length = 373

 Score = 73.8 bits (180), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 12/171 (7%)

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLF 126
           +E +M  L++    NE +  R   ++  L +A+             A+   L   +L L 
Sbjct: 1   MERHMHALLDTVRHNERVLQRFQQIELRLVSATDFAVFHDTLVEALAQAFELPFVTLWLN 60

Query: 127 PD----RWRLGAPSNHTHLA--LSRQSFEPLRIQRLGQE-QHYLGP---LNGPELLVVLP 176
            D    R  L A S     A  + R   + L     G+  Q +LG    L    L V+  
Sbjct: 61  EDILLVREMLDAVSRAKPAAQAVLRGRLDALAGALPGEPGQPWLGAGAELGETALAVLYG 120

Query: 177 EAKAVGSVAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPE 226
            ++   SVA+  L  +  + G +   SRD   +  G+ T LL   A  +  
Sbjct: 121 GSEVPASVAVLPLHQEHGVNGYLCLGSRDPERFSVGKATDLLERFAAFVSA 171


>UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D6I3_LARHH
          Length = 350

 Score = 73.0 bits (178), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 8/170 (4%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +  L+E A+ NE L  R   L+ SL  A      L         +     +L +  D   
Sbjct: 5   LDSLLEHALRNENLHRRYQALELSLIGAPDFAGFLAVLRDELPAVLAPRETLLVVADPDG 64

Query: 132 LGAPSNHTH------LALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
             A            L L R +    ++   G     LG + G E+ + LP    V S A
Sbjct: 65  DIATILGLDETLPPGLVLLRDAGALEQVFPAGCRDPLLGRI-GHEVQIGLPWQGPVLSAA 123

Query: 186 MSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           +  L   ++ LG++     DA+HY+ GQGT  L   A ++   LE  + R
Sbjct: 124 VLPLVRQNSLLGLLAIGCHDAAHYEPGQGTDFLERFAAIVTLCLENVLNR 173


>UniRef50_A0LL56 Diguanylate cyclase with GAF sensor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LL56_SYNFM
          Length = 379

 Score = 71.5 bits (174), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 55  EWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR 114
           E  +A        L   +  ++  A  NE ++     ++R L     LD ++       +
Sbjct: 22  EALLAGLSEENEALRAQLEEVVATAATNERIWRHFAEIERILFRTRELDVLVEELLGELK 81

Query: 115 D-LGLAGASL---------RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLG 164
           +        L         R FPD      P +     +S      + +  +  +   L 
Sbjct: 82  ERFQTDQVILFLCHSDILERFFPDLSETREPVSAGTWIVSLPVEIGMALWNVSPKPFLLS 141

Query: 165 PLNGPELLVVLPE-AKAVGSVAMSMLG-SDADLGVVLFTSRDASHYQQGQGTQLLHEIAL 222
             N  ELL  LPE A  V S  M  L   +   G +   S DA  Y+   GT LL ++ +
Sbjct: 142 EENIEELLEYLPESASPVRSGVMIPLSIHEILFGGLFLGSMDADRYRPRDGTDLLEQLGI 201

Query: 223 MLPELLE 229
            +   ++
Sbjct: 202 KIALAMD 208


>UniRef50_A3UHS7 Tyrosine recombinase n=1 Tax=Oceanicaulis alexandrii HTCC2633
           RepID=A3UHS7_9RHOB
          Length = 221

 Score = 71.1 bits (173), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 73/226 (32%), Gaps = 9/226 (3%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
             L  LD  ++   L + PE    +   +   R        V L +    +    +  + 
Sbjct: 2   TALETLDMESLRAALRERPEIITGDPELMALARDADSGGSVVDLAQRRQKKLEKDLRKVR 61

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPD 128
                L+  A AN     +      ++  A  L  +  +   R A  L +    + L   
Sbjct: 62  ATNDALIALAKANMAAQAQTHAAVLAILEAEDLAALDHKLASRVAGALSVDAVRVFL--- 118

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMS 187
                  S     +        L    L  +   LG +NG     +  P    + S A++
Sbjct: 119 ----EGHSPLKDASAILGCSPELTQALLDDDSERLGLVNGRFADALYGPLGPNLRSEAIA 174

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            +      G++   SRDA  +   QG  L+H +A  L   +  W+ 
Sbjct: 175 RMEIGGHPGILCLASRDARAFTADQGADLIHFLARALERRIAPWLR 220


>UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1
           RepID=C6NZM9_9PROT
          Length = 379

 Score = 70.7 bits (172), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 6/172 (3%)

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGAS 122
            I +L   M  LM++A  NE  + R    ++ L A  SL +++ +    +         +
Sbjct: 7   EIQLLRRQMQSLMDEARLNEKKWRRFEQFEKQLIATRSLPELIRVILEDYKTACETDAVT 66

Query: 123 LRLFPDR---WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP-ELLVVLPEA 178
           L L        R+   S      +              +   YLGP +   E  +  P  
Sbjct: 67  LVLCDPEREIRRILERSQQGSAEVPGLVLMEKLDAHHTKPAPYLGPFDAEMERAIFDPWP 126

Query: 179 KAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLE 229
               S+ +  L   D  +G +   S  A  +     T  +  +A +    LE
Sbjct: 127 TGCQSMILLPLMRQDELIGSLNMASSTAERFTADSSTDFIERLANIFSICLE 178


>UniRef50_C4XU30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1
           RepID=C4XU30_DESMR
          Length = 410

 Score = 67.3 bits (163), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 13/181 (7%)

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
            R  +  L   +  + E   AN+  F               + D+       +R +G+A 
Sbjct: 63  LRGQVRRLGARVVRMQEIFRANDQAFATFRSAMLLSRRLRRMADLPDMLAELSRTMGVAA 122

Query: 121 ASLRLFPDRWRLGAPSNHT-HLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEA 178
            +  L  +++    P       A +  +      +     + Y+GPL   P        A
Sbjct: 123 LTCLLSREQFAAYVPPGFPCPTAKALGAAVNALPRGTDPRRVYVGPLAALPRPDFFFDPA 182

Query: 179 KAV-------GSVAMSMLGSD----ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
                     GS  ++ L         +GV+     D S Y   +GT  L     +L   
Sbjct: 183 ILADQPKLRDGSCFIAPLADKYQPKRRIGVLAMADVDPSRYTPSKGTDFLEHFCEVLAGD 242

Query: 228 L 228
           L
Sbjct: 243 L 243


>UniRef50_A1B4Z3 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans
           PD1222 RepID=A1B4Z3_PARDP
          Length = 236

 Score = 63.8 bits (154), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 79/239 (33%), Gaps = 18/239 (7%)

Query: 9   QETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGT------VSLVEWHMARAR 62
           QE   EL +  +   L+  PE  + +   + A+      R        + +    M    
Sbjct: 3   QEPAAELTEE-IRARLLARPELILSDRDLMRALI---GAREAEVGENVIDIRGRAMQALE 58

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGA 121
           + +  LE     ++  A  N+     +     SL      ++ L       A  L +   
Sbjct: 59  SRLDRLEAAHESVISAAYDNQSGMNTIHRAVLSLLEPMDFEEFLENLDIAVAPILRVETL 118

Query: 122 SLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQ---RLGQEQHYLGPLNGPELLVVLPEA 178
            L +      +  P +   L ++        I    R+ +    +     PE L    EA
Sbjct: 119 RLVM-ESGGAIPEPEDGGPLVIAPAGTVAGLISGGRRMPRGDDIVLRRAVPETLPFHGEA 177

Query: 179 KA-VGSVAMSM--LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           +A + S A+    LG      ++L  S D   +   QGT LL         +L  W+ +
Sbjct: 178 RAPIRSEALLPIDLGPGRFPALLLMGSADIGRFNPAQGTDLLRFFGQAFRLVLISWLRK 236


>UniRef50_B4WFE7 Putative uncharacterized protein n=2 Tax=Brevundimonas
           RepID=B4WFE7_9CAUL
          Length = 237

 Score = 61.9 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 19  AVVDYLIKNPEFFIRNARAVEAIRV-PHPVR----GTVSLVEWHMARARNHIHVLEENMA 73
            V  +L  + +  + +   +E I + PH       G  +L        R      E  M 
Sbjct: 23  EVRGWLQTHAQTLLDDRSLLEEIGLRPHGRNVVEFGAAALTRLEAVVERETGARREVEM- 81

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRL 132
                A AN     +       L  A +  D+  R    A+   GLAGA++         
Sbjct: 82  ----IARANFAAQTQTHVAALDLMEARNHSDLARRLDAAAQGRFGLAGAAI-----AMEK 132

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML--- 189
                    AL   + + L  +       +LGP+    L +       V SVA+  +   
Sbjct: 133 PGGVPFGWRALETGAVDNLLGEH---GLTWLGPMFEG-LDLFGAAGDQVKSVALIRMAPH 188

Query: 190 ---GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              G      +  F S + + +    G +L   +A ++  + ERW
Sbjct: 189 LTPGEPPRSCLCAFGSPEEAGFTPTMGCELAAFLARVVERMAERW 233


>UniRef50_Q2BHA0 Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis
           RepID=Q2BHA0_9GAMM
          Length = 376

 Score = 61.5 bits (148), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 8/182 (4%)

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLA 119
                  L+  + ++ ++A  NE        ++  L + S L D+L       ++   L 
Sbjct: 6   LEQENQELKRTLRIMAKKAERNEATLNSFFEVELRLLSCSRLSDLLDLILIEFKEMFRLN 65

Query: 120 GASLRLF-PDRWRLGAPSNHTHLA----LSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV 174
             +L LF P+       +++T  A    L     + L       ++  +G  + P     
Sbjct: 66  NVNLILFDPEHAARSLLNDYTPPAPGNTLRFVQSQRLLKSIYPNQKLIVGAPSQPLRNEA 125

Query: 175 LP-EAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            P  +  V S A+  L   +  +G +   S D S Y +      +  +A ++   +E  I
Sbjct: 126 FPVTSNPVESCALLPLIRQNCLIGSLHLGSSDPSRYTEHVRYDYIQHLASVVSVCIENCI 185

Query: 233 ER 234
            +
Sbjct: 186 NQ 187


>UniRef50_D2L091 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B
           RepID=D2L091_9DELT
          Length = 415

 Score = 59.2 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 55/172 (31%), Gaps = 14/172 (8%)

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRW 130
            M  L +   AN+  F               L D+     R AR +G+   +  L  + +
Sbjct: 74  QMERLQDIFRANDQAFCTFRAALTLSRQLRHLSDLPDILDRLARAMGVPALACLLSREDF 133

Query: 131 RLGAPSNHTHLALSR--QSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEAK-------A 180
               P+ +   + +    +   L      +   ++GP+    +     P A        +
Sbjct: 134 EAYVPAAYPCPSQTALVAALRSLPRAPASERTVHVGPVAALADPGFFFPPALFAACPELS 193

Query: 181 VGSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
            GS  ++ L      D  +G +     D   Y   +GT  L     +L   L
Sbjct: 194 DGSCFIAPLHDKYRPDRRIGALALADPDPGRYTAEKGTDFLEHFCEVLAGDL 245


>UniRef50_D2L4B3 Histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B
           RepID=D2L4B3_9DELT
          Length = 502

 Score = 58.4 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 13/189 (6%)

Query: 59  ARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGL 118
            R R     L+  +  ++++   +   F +     R +    + +D+     R     GL
Sbjct: 62  ERTRKQAVDLQAKLKTVVDRFEGSFTAFEKFRKAIRVVEMMRAHEDLPAILERIKDLFGL 121

Query: 119 AGASLRLFPDRWRLGAP--SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP 176
              SL L    +    P  +        RQ+   L                 P+      
Sbjct: 122 RAVSLLLDAGEFAAFDPPGARLAEAKAMRQALSALMPGARLPGPFMCPISAVPDPEFFFG 181

Query: 177 EAKA-------VGSVAMSMLGSD----ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLP 225
                      +GS  +S L         +G++ F   +   Y   +G++     A +L 
Sbjct: 182 PGFCAERKVLLLGSCFISPLRDKFGPQRLIGILSFFDSNPDRYTSEKGSEFASHFADILG 241

Query: 226 ELLERWIER 234
             +    +R
Sbjct: 242 YTIVDITDR 250


>UniRef50_C1SHV1 Diguanylate cyclase (GGDEF) domain-containing protein n=1
           Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SHV1_9BACT
          Length = 350

 Score = 57.6 bits (138), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGA 121
                L+  ++ LME    NE        ++ +   A SL +++ +  R+  D  G+  A
Sbjct: 9   KENSDLKGELSGLMELVKENEAKHAGFKAVEFAFLLADSLKEVIEKPLRYLEDIFGVDRA 68

Query: 122 SLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV--LPEAK 179
            L +  D        N+    +     E +      +++ Y    +   L ++      +
Sbjct: 69  VLFINADELDFDREENNLGYRIYF-MPEGVFKTFFLEKRPY---NSDNALNLISEFNVYE 124

Query: 180 AVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +GS   + L  +D  +G +   SRD S +     T  + ++A +    +++ 
Sbjct: 125 DMGSYIFAPLVQNDKIIGSINLYSRDESKFGGEVATNFIKDLASIASVSMQKL 177


>UniRef50_C4XGG2 Sensor protein n=1 Tax=Desulfovibrio magneticus RS-1
           RepID=C4XGG2_DESMR
          Length = 503

 Score = 57.6 bits (138), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 58  MARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLG 117
           + R R     L+  +  ++++   +   F +     R +      +D+     R     G
Sbjct: 61  IERNRKQCVDLQAKLKTVVDRFEGSFTAFEKFRKAIRVVELMRGHEDLPAVLDRIKDLFG 120

Query: 118 LAGASLRLFPDRWRLGAP--SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVV 174
           L   SL L    +    P  +        R     L  +       ++G +   P+    
Sbjct: 121 LRAVSLLLDAGEYAPFEPPGARLAEAGALRAKLAELMPKG-AGPGPFMGSIRAVPDPEFF 179

Query: 175 LPEAKA-------VGSVAMSMLGSD----ADLGVVLFTSRDASHYQQGQGTQLLHEIALM 223
             +          +GS  +  L         +G++ F   +   Y   +G++     A +
Sbjct: 180 FGQGFCAERKVLLLGSCFIYPLRDKFSPQKLVGILSFFDSNPDRYTSEKGSEFATHFADI 239

Query: 224 LPELLERWIER 234
           L   +    +R
Sbjct: 240 LGYTIVDVTDR 250


>UniRef50_Q0FEV9 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2255 RepID=Q0FEV9_9RHOB
          Length = 241

 Score = 57.6 bits (138), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 27/193 (13%)

Query: 58  MARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDL 116
           + R    +  +E   + ++  A  N     ++           +  + L      WA  L
Sbjct: 51  LKRLEGRVEEIEGQNSNIISAAYKNISTTTKVHSAILDALEPKTFTEFLHFLKTDWASSL 110

Query: 117 GLAGASLRL----------------FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ 160
            +  A L L                F             H     Q  +P  +       
Sbjct: 111 NIDVARLCLEAPSINQEDIPQLEIEFGPSVVFLQEGEIDHYISLGQDSDPRPVT------ 164

Query: 161 HYLGPLNGPELLVVLPEAKAVGSVAMSML--GSDADLGVVLFTSRDASHYQQGQGTQLLH 218
             L  +      +    A  + S A+  L  G     G++L  S ++  +    GT L  
Sbjct: 165 --LRQIRKGASNIYNDIAPKLRSEALMKLDLGQGNSPGLLLLGSINSDQFLPNMGTDLFV 222

Query: 219 EIALMLPELLERW 231
               +  ++++RW
Sbjct: 223 FYGSIFEKIMQRW 235


>UniRef50_C5SIN7 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus
           CB 48 RepID=C5SIN7_9CAUL
          Length = 252

 Score = 56.1 bits (134), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 29/217 (13%)

Query: 28  PEF---FIRNARAVEAIRVPHPVR-------GTVSLVEWHMARARNHIHVLEENMALLME 77
           PEF     ++   ++ + +    R         +S +E            +   +     
Sbjct: 48  PEFVQELKQDRELLDKLGLQPKTRNLIDFGPAALSRLEAKAI----RDFDIRRQIE---A 100

Query: 78  QAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPS 136
            A AN     +   +  SL  A +  D+  R +   R+  GL  A++ L  D   +    
Sbjct: 101 TARANFDAQGQAHAMALSLLEARNHSDLARRLNEEVRNRFGLVCATIAL-EDTAPIPLGW 159

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSM--LGSDAD 194
                           +  LG +             +   E + + S A+    +  +  
Sbjct: 160 MTLDYGGVDYIIGETSLSLLGPDG-VC-------RALFGDEVRRIKSAAVIRTAMWREGR 211

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            G V F S D   +    G +L+  I  ++  + ERW
Sbjct: 212 PGAVAFGSADWEGFSPDMGAELVAFITRVVERVAERW 248


>UniRef50_Q9LCV5 Atp operon (Fragment) n=4 Tax=Rhodospirillum rubrum
           RepID=Q9LCV5_RHORU
          Length = 886

 Score = 56.1 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 5/117 (4%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGT----VSLVEWHMARARNHIHVLE 69
           ELD+ +V+ YL+KNP+F + +   +     P          + +    + R +  +  L+
Sbjct: 693 ELDEASVLGYLLKNPDFLMDHPEVLMMATPPRRFEKADDKVIDIQHVMLRRLQTEMADLQ 752

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRL 125
           +    L+    +N       L    +L     L  ++          L +   +LRL
Sbjct: 753 DCAEQLIITTRSNMATQKGTLQAALALLDCEGLGPLVRTVAEDLPMLLDVDICALRL 809


>UniRef50_A5V2S6 Uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1
           RepID=A5V2S6_SPHWW
          Length = 186

 Score = 54.5 bits (130), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 20/184 (10%)

Query: 58  MARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDL 116
           MA  +  +  +EE    L+  A  + G    +     + T +  LD ++ +    W   L
Sbjct: 12  MASLKRRMAEVEEANQDLIAFARGHSGAVSSIHAAVLAATESDGLDHLIHIVTQVWPDML 71

Query: 117 GLAGASLRLFPDRWRLGAPSNHTHLALSR------QSFEPLRIQRLGQEQHYLGPLNGPE 170
           GL   S+ LF     L A ++       R         E + ++ + +     G      
Sbjct: 72  GLDAVSVALFVGDQGLRADASGMQFVERRIIERSIVDIEGVVMRSVERGHPLFG------ 125

Query: 171 LLVVLPEAKAVGSVAMSMLGSDADL--GVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
                P ++ + + A+  L ++A L  GV+    R    +    G++LL  +  ML  ++
Sbjct: 126 -----PASELIRAEALIRLSAEAPLPGGVLALGQRRPMGFDTRAGSELLGFLGAMLSRMI 180

Query: 229 ERWI 232
            RW+
Sbjct: 181 GRWL 184


>UniRef50_C6BU23 Sensor protein n=1 Tax=Desulfovibrio salexigens DSM 2638
           RepID=C6BU23_DESAD
          Length = 485

 Score = 53.4 bits (127), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 50/177 (28%), Gaps = 13/177 (7%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGAS 122
             I  LE  +        ++  LF +     + +    SL  +       A++LGL   +
Sbjct: 66  ERIKSLEGKLKEAYSVHNSDFQLFAKFGRALQYVNGLKSLSGLSDMLTGVAQELGLGRIA 125

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQ--EQHYLGPLNGPELLVVLPEAKA 180
           + L  DR                +         L     + +LGP++      V      
Sbjct: 126 VVL--DRELCKGMPCPEIPTFYLKGCMRYIDATLNNGPNRVFLGPISRMMRPDVFFGDPE 183

Query: 181 VG-----SV-AMSMLGS---DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           VG     S  A  M+        +G+          +    GT  L      +   +
Sbjct: 184 VGPEMGGSCFAFGMIDKYNPGKLIGLFSIHDPSEDRFHPEMGTDFLEYFCSSVASTI 240


>UniRef50_A9GBK6 Site-specific tyrosine recombinase XerC n=40 Tax=Rhodobacterales
           RepID=A9GBK6_9RHOB
          Length = 235

 Score = 52.2 bits (124), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 51/183 (27%), Gaps = 8/183 (4%)

Query: 58  MARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-L 116
           M R    +  LE+    ++  A  N     ++      L      +  L        + L
Sbjct: 52  MERMEARLDRLEDTHRSVIAAAYENLAGTNQIHRAVLRLLDPMDFESYLGNLGGELAEIL 111

Query: 117 GLAGASLRLFPDR--WRLGAPSNHTHLALSRQSFEPLRIQRL---GQEQHYLGPLNGPEL 171
            +   +L L                 L +    F    I         Q  L  +     
Sbjct: 112 RVDSVTLVLETAHPEQDAAVQRMDQVLKVVEPGFVEQYINPQRNGPDRQVTLRQMQSGHA 171

Query: 172 LVVLPEAKAVGSVAMSML--GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLE 229
                +A  + S A   L  G     G+++  S D   +    GT LL   A +    + 
Sbjct: 172 RTHGAKADFIRSEACLKLELGEGRLPGLLVLGSEDPHQFTPQHGTDLLAFFAGVFERSMR 231

Query: 230 RWI 232
            W+
Sbjct: 232 HWL 234


>UniRef50_Q2SDE1 Response regulator containing a CheY-like receiver domain and a
           GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396
           RepID=Q2SDE1_HAHCH
          Length = 350

 Score = 47.6 bits (112), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 54/172 (31%), Gaps = 9/172 (5%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGA-SLRLFPDR 129
           +  L  +A  NE +   L  ++ ++   + +   L    +  +D  G+       +    
Sbjct: 4   LEELFARARKNEEIARNLFDIEVAMLNVAKVQPFLEHLLQTVQDKFGVKHVWYATVESAH 63

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPE--LLVVLPEAK----AVGS 183
                 +      L+ +      ++ L   +    PL                    + S
Sbjct: 64  TESLIKTLKASPELAGKWVSAPSVEYLAATKGAREPLVDHANLYRFFFMTPPEIRTQIRS 123

Query: 184 VAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           +A+  L  +  L G +   + D   Y+  +    L ++++     L   + R
Sbjct: 124 IAILPLILEGRLAGSLNLAADDQERYRADKECFFLRQLSVKASLCLSSVVAR 175


>UniRef50_A6VU38 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6VU38_MARMS
          Length = 354

 Score = 47.6 bits (112), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 10/175 (5%)

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPD 128
            ++  L++    NE +  +   ++R + +    D  +    +   +   +    + L  +
Sbjct: 2   HDINELIDNVRRNEEIARKFFEIERCILSIGRCDQFVSTLTKEVQKQFSVPYVWVNLINE 61

Query: 129 -------RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAV 181
                        P     +  +R+      I+   +       L+    ++       +
Sbjct: 62  APLSHLIESLEKMPDLRDRVLFTRRRSMIDIIKSSNKTVLVNTNLSQCREIIPSVYRDII 121

Query: 182 GSVAMSMLGSDADL-GVVLFTSRDASHYQQ-GQGTQLLHEIALMLPELLERWIER 234
            SVA+S L  D +L G+      D+S Y    + T LL ++A+ +   L     R
Sbjct: 122 SSVAISPLTIDGELVGLFCQADSDSSRYDATTKDTFLLDQLAIKISICLSNVTAR 176


>UniRef50_C6MIN9 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212
           RepID=C6MIN9_9PROT
          Length = 180

 Score = 46.8 bits (110), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 28/177 (15%)

Query: 63  NHIHVLEENMALLMEQAIANEG------------LFYRLLYLQRSLTAASS-----LDDM 105
           +    L+  +   ++QA  NE             +        R L  + S     L DM
Sbjct: 7   DKNRELQRKLDHFIKQARVNEKKQELYETFGFEIIGASTPKQLRDLLLSQSIVRFQLLDM 66

Query: 106 LMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLG- 164
           ++      +D        RLF +            L +     +   IQ        LG 
Sbjct: 67  VLCLVDHHKDAD------RLFFEHDEEARLDCANKLLILDVINDAQIIQSF-IVNPMLGT 119

Query: 165 -PLNGPE-LLVVLPEAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLH 218
             L     ++  L  +  + S A   L  S+  +G ++  S+D   YQ+  GT    
Sbjct: 120 EALKKYRWMINGLKSSDQIKSAAFLPLWRSNQVIGAMMLLSQDPHRYQKDIGTFFCK 176


>UniRef50_C6HWE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum
           RepID=C6HWE5_9BACT
          Length = 1586

 Score = 45.7 bits (107), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 23/185 (12%)

Query: 51  VSLVEWHMARARNHIHVLEENMALLMEQ-AIANEGLFYRLLYLQRSLTAASSLDDMLMRF 109
           V+L     +R           ++      A AN+ L     + + +L    S   +    
Sbjct: 434 VTLRHRQSSRL--------TRLSDFTAFFARANQLLSDAHTFEETALVLCESARQIPGLL 485

Query: 110 HRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQH--YLGPLN 167
             W  D+     +                    LS    + +R + L       +L   +
Sbjct: 486 LAWIGDINTPEVT----------TLAVAGPPELLSDSLVQGVREETLKGPGSPRFLSADD 535

Query: 168 GPELLVVLPEAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPE 226
           GP+   +LP   +VGS+A+  L    +  G +L    + + +      +LL E+A  + +
Sbjct: 536 GPDETSLLPLPPSVGSLAVLPLSREGSPFGTLLLFHEEWNIFDTEI-RRLLGELARNISK 594

Query: 227 LLERW 231
            L+R 
Sbjct: 595 TLDRL 599


>UniRef50_C0GMT4 Sensor protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1
           RepID=C0GMT4_9DELT
          Length = 622

 Score = 45.7 bits (107), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 11/175 (6%)

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGA 121
           R     L   +  ++     +   F R       + + ++L  +        ++L L G 
Sbjct: 37  RKSSRKLRSQVEEIVSTYQDSMAAFQRFRKCCSIVHSTTTLARLPGLLQSLKKELRLDGI 96

Query: 122 SLRLFPDRWRLGAPSNHTHLALS--RQSFEPLRIQRLGQEQHYLGP-LNGP---ELLVVL 175
            L L  + +    P + T +  S   +    L +        +    L      E L   
Sbjct: 97  HLVLASEEYDGLVPDSVTTMPQSGLHKLRAVLDLDHFSGCTIHSAEDLRASGLLEDLGFT 156

Query: 176 PEAKA-VGSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLP 225
           P+     GS  +  L         +G+++F  RD++ Y +   T  +   A    
Sbjct: 157 PQGSLRTGSAIVFSLHDRFRSQRPVGLLMFYDRDSNRYTREVATDFVEHFAETFA 211


>UniRef50_C0Q9U5 Putative reponse regulator (CheY and GGDEF domain family protein)
           n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q9U5_DESAH
          Length = 342

 Score = 44.5 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDM-LMRFHRWARDLGLAGASLRLFPDRWRLG 133
           ++ +  ANE +  +  +++ S+    +  D       +  +   +    + +  +     
Sbjct: 7   ILARLAANEQVAKKFHHIEISVLTILNFQDFFEQLLTKVGQTFQIPHVWISIIQESAIAD 66

Query: 134 APSNHTHLALSRQSFEPL-RIQRLGQEQHYLGPLNGPELLVVL-----PEAK-AVGSVAM 186
                   A+ + S   +     L     Y  PL   + L        PEA   +GS+A+
Sbjct: 67  QILAMEDSAVLKSSTSFITHSTFLRLIGSYRQPLLANQNLDRFSPLVPPEAHYDIGSIAI 126

Query: 187 SMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           + L  D +L G +    +    +  G  T LL  ++L +   L
Sbjct: 127 APLFIDGELIGSLNQADQVCDRFMPGIDTDLLARLSLKISLCL 169


>UniRef50_Q1JWC9 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684
           RepID=Q1JWC9_DESAC
          Length = 353

 Score = 44.5 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 9/163 (5%)

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLG 133
           L E+   NE L  +   ++  + +     D      +   D   +      L  D     
Sbjct: 7   LFERVRENEQLAEKFYKVELKILSTLKFADFFDTLLKEISDVFQVPFVWFSLIADTEVAA 66

Query: 134 APSNHTHLALSRQS---FEPLRIQRLGQEQHYLGPLNGP--ELLVVLPEAKA--VGSVAM 186
                      RQ     +  ++QRL  +   +  +N      L +LP+ +   V S+A+
Sbjct: 67  MLQQCRGECSERQRINLIDRHQLQRLIGDDLSVQLVNDQLHRYLPLLPKDQHYAVRSIAV 126

Query: 187 SMLGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           + +  D   +G +     D   +  G  T LL  +AL +   L
Sbjct: 127 APITLDGIVIGTLNQADVDGQRFAPGLNTVLLERLALKVAICL 169


>UniRef50_C7LSE4 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LSE4_DESBD
          Length = 434

 Score = 44.1 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 43/157 (27%), Gaps = 9/157 (5%)

Query: 84  GLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLAL 143
             F   + L +       L   L    R  R L      L       R+         A+
Sbjct: 89  ETFRGTVDLVQQTKRLEELPATLDAIRRL-RTLHTLHVVLDHDLFEQRIPKGVGRASAAM 147

Query: 144 SRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL---PEAKAVGSVAMSMLGSD----ADLG 196
            R+  +          + +LG +   E         E    GS  +  LG        +G
Sbjct: 148 IRERLKQFSPSPHA-PRLFLGEVRHIEKPGFFLGLDEDPPSGSCFIFALGHKYVHSKIIG 206

Query: 197 VVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           VV     +   Y   + T  L     +L   L   +E
Sbjct: 207 VVAAYDPNPRRYAPDKATDFLSHFCDILACTLITALE 243


>UniRef50_Q5UW88 Sensor protein n=2 Tax=cellular organisms RepID=Q5UW88_HALMA
          Length = 1971

 Score = 42.6 bits (99), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 56/186 (30%), Gaps = 27/186 (14%)

Query: 54   VEWHMARARNHI--HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM-RFH 110
            VE  +   R  +    +E  +  L E A                L +AS   ++      
Sbjct: 1559 VELLVQWVRYELAGEAVETKLRELNETAQR--------------LLSASDASEVASTAIE 1604

Query: 111  RWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLR--IQRLGQEQHYLGPLNG 168
               R LGL    +  + +      P+  T  A +    +P       L  E    G +  
Sbjct: 1605 SAKRVLGLPMTGIWWYDEGKDALVPAGLTDEAGALLGTQPTFDGEGSLAWETFESGEVRV 1664

Query: 169  ----PELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALML 224
                 E+     +   + S  +  LG     G+++  S +   +       L   +A  +
Sbjct: 1665 YDDLQEVEARFNDDTPIRSETLVPLGDK---GILISGSTEQRAF-SETDRGLFEILAATV 1720

Query: 225  PELLER 230
               L R
Sbjct: 1721 ETALSR 1726


>UniRef50_A8ZV84 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfococcus
           oleovorans Hxd3 RepID=A8ZV84_DESOH
          Length = 347

 Score = 42.6 bits (99), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 51/159 (32%), Gaps = 10/159 (6%)

Query: 80  IANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLGAPSNH 138
             NE    +   +++ + +     D+        +    L    L +  +        + 
Sbjct: 12  RENEETAKKFYEVEKKILSILRFKDLFDALLAEIKGQFNLPYVWLSIIENSEAHHLIESI 71

Query: 139 THLALSRQSFEPL--RIQRLGQEQHYLGPLNGPE----LLVVLPEAKA--VGSVAMSMLG 190
             +    ++   +  R            P+   +       +LP  +   V S+A++ + 
Sbjct: 72  DDMDPELKASINIIDRSAFFALIGQQTEPILANDGLKPFFKLLPADRHYLVKSMAIAPIM 131

Query: 191 SDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
            D ++ G +         ++ G  T LL ++A  +   L
Sbjct: 132 MDGEIVGSLNQGDAAQDRFEPGMDTSLLEQLATKVSLCL 170


>UniRef50_B4VV26 Tetratricopeptide repeat domain protein n=1 Tax=Microcoleus
           chthonoplastes PCC 7420 RepID=B4VV26_9CYAN
          Length = 945

 Score = 41.1 bits (95), Expect = 0.031,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 34/232 (14%)

Query: 1   MKQPGEELQETLTELDDRAVVD-YLIKNPEFFIRNARAVEAIRVPHPVRG---------- 49
           ++     +++  T++  + +   Y  +N +++      +  +   +P +G          
Sbjct: 402 IETAINIIEQLRTQIASQQLRQSYFARNQDYYQLYIDLLMQLHQQNPNKGYDAQAFHASE 461

Query: 50  ---TVSLVEWHMARARNHIHVLEENMA-LLMEQAIA-----NEGLFYRLLYLQRSLTAAS 100
                SL+E            + + +   L+EQ        N+  + +   L    +   
Sbjct: 462 RSRARSLIE----LLTEANADIRQGVNPQLLEQERTLTQQLNDLEYRKYQLLSTQHSQTE 517

Query: 101 SLDDMLMRFHRWARDLGLAGASLRL-FPDRWRLGAPSNHTHLALSRQSFEP---LRIQRL 156
            LDD+  +       L    A +R+  P    L  P   T   + +Q  +    L    L
Sbjct: 518 -LDDIQQKIDTQLNQLNQLEAKIRIASPRYAELKYPEPLTLQQIQQQVLDEDTVLLEYSL 576

Query: 157 GQEQHYLGPLNGPELLVV-LPEAKAVGSVAMSMLGS----DADLGVVLFTSR 203
           G+++ YL  +    +    LP    + + A + L      DA  G ++  S 
Sbjct: 577 GEDRSYLWAVTKDNITSYQLPPRSEIETAAKAFLSQTTYRDAAFGEIIPASN 628


>UniRef50_B7RSS4 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148
           RepID=B7RSS4_9GAMM
          Length = 380

 Score = 40.7 bits (94), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 9/170 (5%)

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLR 124
            +LE  +A  +     N  L+ +   L+R L  A  L  +L +      R      A L 
Sbjct: 26  ELLELRLAERISV---NRYLYQQTQQLERMLLDAKDLQCLLEVLLVSLPRHFSFRAAELW 82

Query: 125 LFPDRWRLGAPSN----HTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           L+     L         + H    +Q    ++     +    +  +    +  VL     
Sbjct: 83  LYDPEDVLAGLIVGGERYGHYLQLQQDAFEIQELYSLEPGIEIIDVTDSRMFEVLKSEHG 142

Query: 181 VGSVAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLE 229
           +  V +  L     L G +    ++ S       + LL  +A+M+     
Sbjct: 143 IDYVLLLPLIESGRLIGSLHLGLQEDSLAFGNAESDLLSHLAMMISRCFA 192


>UniRef50_B0DQM4 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
            RepID=B0DQM4_LACBS
          Length = 1242

 Score = 39.9 bits (92), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 3/66 (4%)

Query: 49   GTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMR 108
            G +S  +  +   R     L E +  L +    N+ L      L++     + L    + 
Sbjct: 951  GALSDSQRTVRVLREENSDLRERVERLADAEAENDELRRVCSELRQ---ECTDLRRECVE 1007

Query: 109  FHRWAR 114
              R  R
Sbjct: 1008 LRREMR 1013


>UniRef50_A9AUL9 Anti-sigma-factor antagonist n=1 Tax=Herpetosiphon aurantiacus ATCC
           23779 RepID=A9AUL9_HERA2
          Length = 689

 Score = 39.9 bits (92), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 59/203 (29%), Gaps = 39/203 (19%)

Query: 38  VEAIRVPHPV------RGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLY 91
           +  I +P             SL+   +   RN I  L              + L      
Sbjct: 370 LAQIDLPADQINGFLATAHTSLLHTVLELQRNEITGL--------------DRLLAANHE 415

Query: 92  LQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPL 151
           L   L +        +    W + L ++ A L L+ ++     P      ++  +     
Sbjct: 416 LSMLLVSNQKQQTGKLA---WMQRLPVSIACLALWDEQK----PGFLRLASIYSKDGSST 468

Query: 152 RIQRLGQEQHYLGPLNGPELLVVLPEAKAVGS---VAMSMLGSDA-DLGVVLFTSRDASH 207
                     +       E    L +A+ + S   VA   + + + D G++ F   D   
Sbjct: 469 IK---AGSHCHGSEFPPAE---FLEQARQLNSSGYVACVPIVTASHDWGILAFGHADVQK 522

Query: 208 YQQGQGTQLLHEIALMLPELLER 230
                 +  +   A +L   LE 
Sbjct: 523 TIADINSLYI--WASILGSSLEH 543


>UniRef50_A8P5V6 HSF-type DNA-binding domain containing protein n=1 Tax=Brugia
           malayi RepID=A8P5V6_BRUMA
          Length = 479

 Score = 39.9 bits (92), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 18/102 (17%)

Query: 3   QPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR------------GT 50
            P E+     +E  D+  +++   +P F   +   +  I+   P                
Sbjct: 150 TPIEKSSLARSE-SDQDHLEF--SHPNFIQHHPELLVNIKRKTPGNRNNENNSVAMPPKE 206

Query: 51  VSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYL 92
           +S++   + + R     +E  MA L+     NE ++ ++ +L
Sbjct: 207 ISVLVDEIRQLREKQRTMENKMAHLV---KENEAMWQQVSHL 245


>UniRef50_A7HH95 Sensor protein n=1 Tax=Anaeromyxobacter sp. Fw109-5
           RepID=A7HH95_ANADF
          Length = 912

 Score = 39.5 bits (91), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 16/184 (8%)

Query: 58  MARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DL 116
           M+ AR+     E         A  +      L  +   L+ A + + +        R   
Sbjct: 192 MSDARDRQEQTERARER----AEESARRLKLLQEVTAGLSRADTAEAIAQLVVDRVRVAA 247

Query: 117 GLAGASLRLFPDRWRLGAPSNHTHLA------LSRQSFEPLRIQRLGQEQHYLGPLNGPE 170
           G +  SLRL      + A  +  H        +S +   P+      +E  +LG +   +
Sbjct: 248 GASAGSLRLLEGDELVLAEESGAHAVRGRFPRISTRDSYPVSEVVRRREPIWLGNVEEFQ 307

Query: 171 LLVVLPE-AKAVGS---VAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPE 226
                 E A  +G    VAM ++G    LG +     +   + Q      L  +A    +
Sbjct: 308 RFPAFAETAAQLGVRAGVAMPLVGHGYVLGALSLGFAEPRAFGQD-ERDFLLAVAEQCAQ 366

Query: 227 LLER 230
            L R
Sbjct: 367 ALGR 370


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_B3PEI7 Putative uncharacterized protein n=2 Tax=Gammapr...   228   9e-59
UniRef50_Q21P79 Putative uncharacterized protein n=1 Tax=Sacchar...   227   2e-58
UniRef50_B7S2B7 Putative uncharacterized protein n=1 Tax=marine ...   222   6e-57
UniRef50_P55886 Uncharacterized protein yigA n=156 Tax=Enterobac...   221   2e-56
UniRef50_Q1YSU9 Putative uncharacterized protein n=1 Tax=gamma p...   215   8e-55
UniRef50_Q47JM9 Putative uncharacterized protein n=2 Tax=Betapro...   215   1e-54
UniRef50_Q3JEA1 Putative uncharacterized protein n=2 Tax=Nitroso...   212   6e-54
UniRef50_Q60AJ3 Putative uncharacterized protein n=1 Tax=Methylo...   211   1e-53
UniRef50_O05323 ORF 240 protein n=25 Tax=Pseudomonadaceae RepID=...   211   1e-53
UniRef50_Q2SQ63 Uncharacterized protein conserved in bacteria n=...   211   2e-53
UniRef50_Q0AFS2 Putative uncharacterized protein n=2 Tax=Nitroso...   210   4e-53
UniRef50_A7BTH8 Protein containing DUF484 n=1 Tax=Beggiatoa sp. ...   208   1e-52
UniRef50_A1TXX8 Putative uncharacterized protein n=3 Tax=Marinob...   207   3e-52
UniRef50_B5JX80 3',5'-cyclic-nucleotide phosphodiesterase n=1 Ta...   207   3e-52
UniRef50_D2TWV4 Putative uncharacterized protein n=1 Tax=Arsenop...   206   6e-52
UniRef50_A6T2Z5 Uncharacterized conserved protein n=72 Tax=Burkh...   205   7e-52
UniRef50_C6MFM7 Putative uncharacterized protein n=1 Tax=Nitroso...   203   3e-51
UniRef50_A1K307 3',5'-cyclic-nucleotide phosphodiesterase n=3 Ta...   202   1e-50
UniRef50_Q1N420 Putative uncharacterized protein n=1 Tax=Bermane...   202   1e-50
UniRef50_A0Y9E1 Putative uncharacterized protein n=1 Tax=marine ...   202   1e-50
UniRef50_C7RPB7 Putative uncharacterized protein n=1 Tax=Candida...   200   3e-50
UniRef50_Q2BRF9 Putative uncharacterized protein n=1 Tax=Neptuni...   199   7e-50
UniRef50_C4LDU7 Putative uncharacterized protein n=1 Tax=Tolumon...   199   7e-50
UniRef50_A4A9F1 Putative uncharacterized protein n=2 Tax=unclass...   198   1e-49
UniRef50_Q1H4W9 Putative uncharacterized protein n=2 Tax=Methylo...   197   4e-49
UniRef50_B5FCQ9 3'-5'-cyclic nucleotide phosphodiesterase n=3 Ta...   196   6e-49
UniRef50_A4BTZ4 Putative uncharacterized protein n=1 Tax=Nitroco...   195   9e-49
UniRef50_B8GT90 Putative phytochrome sensor protein n=1 Tax=Thio...   195   9e-49
UniRef50_D0Z0U0 Putative uncharacterized protein n=1 Tax=Photoba...   195   1e-48
UniRef50_C3X4I5 Putative uncharacterized protein n=2 Tax=Oxaloba...   194   2e-48
UniRef50_Q2Y5Y9 Putative uncharacterized protein n=1 Tax=Nitroso...   194   2e-48
UniRef50_A8TB79 Site-specific tyrosine recombinase XerC n=56 Tax...   192   8e-48
UniRef50_A9IH30 Putative uncharacterized protein n=5 Tax=Bordete...   192   1e-47
UniRef50_B9ZNC2 Putative phytochrome sensor protein n=1 Tax=Thio...   191   1e-47
UniRef50_D0I355 Putative uncharacterized protein n=1 Tax=Grimont...   191   2e-47
UniRef50_C5S7I3 Putative uncharacterized protein n=1 Tax=Allochr...   188   1e-46
UniRef50_Q48AR7 Putative uncharacterized protein n=1 Tax=Colwell...   188   1e-46
UniRef50_C7R6T1 Putative uncharacterized protein n=1 Tax=Kangiel...   188   1e-46
UniRef50_A1WWB4 Putative uncharacterized protein n=1 Tax=Halorho...   188   1e-46
UniRef50_Q1ZLA2 Putative uncharacterized protein n=4 Tax=Photoba...   187   4e-46
UniRef50_A4B9F2 Putative uncharacterized protein n=1 Tax=Reineke...   185   1e-45
UniRef50_Q0VM17 Putative uncharacterized protein n=2 Tax=Alcaniv...   184   2e-45
UniRef50_C6WT35 Putative uncharacterized protein n=1 Tax=Methylo...   184   2e-45
UniRef50_B8KSV2 Putative uncharacterized protein n=1 Tax=gamma p...   182   6e-45
UniRef50_Q2PYI2 Putative uncharacterized protein n=1 Tax=uncultu...   182   7e-45
UniRef50_A6F902 Uncharacterized conserved protein, YigA-like pro...   182   1e-44
UniRef50_A0Z3C5 Putative uncharacterized protein n=1 Tax=marine ...   180   3e-44
UniRef50_Q65RL8 Putative uncharacterized protein n=5 Tax=Pasteur...   180   4e-44
UniRef50_B4S2D8 Uncharacterized conserved protein, YigA-like pro...   179   6e-44
UniRef50_B2SMW7 Putative uncharacterized protein n=20 Tax=Xantho...   179   8e-44
UniRef50_A3YDJ8 Putative uncharacterized protein n=1 Tax=Marinom...   178   1e-43
UniRef50_A4SRX0 Putative uncharacterized protein n=2 Tax=Aeromon...   176   7e-43
UniRef50_Q31IM1 Putative uncharacterized protein n=1 Tax=Thiomic...   175   1e-42
UniRef50_Q5QUS7 Uncharacterized conserved protein, YigA-like n=2...   174   2e-42
UniRef50_Q0ACL8 Putative uncharacterized protein n=1 Tax=Alkalil...   174   2e-42
UniRef50_C5V603 Putative uncharacterized protein n=2 Tax=Gallion...   174   2e-42
UniRef50_A1WRJ5 Putative uncharacterized protein n=19 Tax=cellul...   173   4e-42
UniRef50_C7HXH1 Putative uncharacterized protein n=1 Tax=Thiomon...   172   9e-42
UniRef50_C0N8U6 Putative uncharacterized protein n=1 Tax=Methylo...   171   1e-41
UniRef50_Q088K7 Putative uncharacterized protein n=21 Tax=Shewan...   171   2e-41
UniRef50_A8TIN7 Site-specific tyrosine recombinase XerC n=1 Tax=...   171   2e-41
UniRef50_A6W1A9 Putative uncharacterized protein n=1 Tax=Marinom...   170   3e-41
UniRef50_Q1QSV0 Putative uncharacterized protein n=1 Tax=Chromoh...   165   1e-39
UniRef50_Q7NV17 Putative uncharacterized protein n=2 Tax=Chromob...   164   3e-39
UniRef50_A6GU47 Putative uncharacterized protein n=1 Tax=Limnoba...   163   4e-39
UniRef50_B6IPE1 Putative uncharacterized protein n=1 Tax=Rhodosp...   162   8e-39
UniRef50_C1D8P9 DUF484 domain containing protein n=1 Tax=Laribac...   161   2e-38
UniRef50_UPI0000E105BC Uncharacterized conserved protein, YigA-l...   161   2e-38
UniRef50_Q2VZB9 Uncharacterized protein conserved in bacteria n=...   152   1e-35
UniRef50_C6NUR3 Putative uncharacterized protein n=1 Tax=Acidith...   148   1e-34
UniRef50_C5JAZ1 Conserved uncharacterized protein n=1 Tax=uncult...   147   3e-34
UniRef50_A4T0G4 Putative uncharacterized protein n=2 Tax=Polynuc...   146   4e-34
UniRef50_A7HT45 Putative uncharacterized protein n=1 Tax=Parviba...   145   1e-33
UniRef50_Q3IDS1 Putative uncharacterized protein n=2 Tax=Alterom...   143   4e-33
UniRef50_B5ENS3 Putative uncharacterized protein n=2 Tax=Acidith...   140   3e-32
UniRef50_Q0AKV4 Putative uncharacterized protein n=1 Tax=Maricau...   140   4e-32
UniRef50_B9NJT9 Predicted protein (Fragment) n=2 Tax=cellular or...   139   6e-32
UniRef50_B4RB98 Putative uncharacterized protein n=4 Tax=Cauloba...   133   3e-30
UniRef50_A0L4T5 Putative uncharacterized protein n=1 Tax=Magneto...   133   3e-30
UniRef50_B0T3E1 Putative uncharacterized protein n=1 Tax=Cauloba...   131   1e-29
UniRef50_D0L0D3 Putative uncharacterized protein n=1 Tax=Halothi...   131   2e-29
UniRef50_A4CFE2 Putative uncharacterized protein n=1 Tax=Pseudoa...   128   1e-28
UniRef50_A3UHS7 Tyrosine recombinase n=1 Tax=Oceanicaulis alexan...   125   1e-27
UniRef50_C0N6Q6 GGDEF domain protein n=1 Tax=Methylophaga thioox...   124   2e-27
UniRef50_Q0F1F2 Sensory box protein n=1 Tax=Mariprofundus ferroo...   119   9e-26
UniRef50_A4G925 Putative uncharacterized protein n=2 Tax=Hermini...   117   4e-25
UniRef50_A1B4Z3 Putative uncharacterized protein n=1 Tax=Paracoc...   117   4e-25
UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthin...   116   4e-25
UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr...   116   4e-25
UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp....   113   5e-24
UniRef50_B4WFE7 Putative uncharacterized protein n=2 Tax=Brevund...   112   9e-24
UniRef50_C0DT94 Putative uncharacterized protein n=1 Tax=Eikenel...   111   2e-23
UniRef50_C5A928 Diguanylate cyclase n=1 Tax=Burkholderia glumae ...   107   3e-22
UniRef50_D2L4B3 Histidine kinase n=1 Tax=Desulfovibrio sp. FW101...   107   3e-22
UniRef50_B5JXR4 Diguanylate cyclase n=1 Tax=gamma proteobacteriu...   106   5e-22
UniRef50_A0LL56 Diguanylate cyclase with GAF sensor n=1 Tax=Synt...   106   8e-22
UniRef50_B2JML9 Diguanylate cyclase with GAF sensor n=6 Tax=Burk...   105   1e-21
UniRef50_C4XGG2 Sensor protein n=1 Tax=Desulfovibrio magneticus ...   105   1e-21
UniRef50_Q2BHA0 Sensor histidine kinase n=1 Tax=Neptuniibacter c...   104   2e-21
UniRef50_C4XU30 GGDEF domain protein n=1 Tax=Desulfovibrio magne...   104   2e-21
UniRef50_C5SIN7 Putative uncharacterized protein n=1 Tax=Asticca...   104   3e-21
UniRef50_Q0FEV9 Putative uncharacterized protein n=1 Tax=Rhodoba...   104   3e-21
UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge...   103   4e-21
UniRef50_A9GBK6 Site-specific tyrosine recombinase XerC n=40 Tax...   103   6e-21
UniRef50_C6BU23 Sensor protein n=1 Tax=Desulfovibrio salexigens ...    99   1e-19
UniRef50_D2L091 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW...    98   2e-19
UniRef50_Q9LCV5 Atp operon (Fragment) n=4 Tax=Rhodospirillum rub...    98   2e-19
UniRef50_A5V2S6 Uncharacterized protein n=1 Tax=Sphingomonas wit...    93   7e-18
UniRef50_C1SHV1 Diguanylate cyclase (GGDEF) domain-containing pr...    93   1e-17
UniRef50_C0GMT4 Sensor protein n=1 Tax=Desulfonatronospira thiod...    88   2e-16
UniRef50_A6VU38 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6...    86   9e-16
UniRef50_Q2SDE1 Response regulator containing a CheY-like receiv...    80   4e-14
UniRef50_C6MIN9 Putative uncharacterized protein n=1 Tax=Nitroso...    75   3e-12
UniRef50_C6HWE5 Diguanylate cyclase/phosphodiesterase with PAS/P...    71   3e-11
UniRef50_O31086 Orf235 (Fragment) n=11 Tax=Enterobacteriaceae Re...    69   1e-10

Sequences not found previously or not previously below threshold:

UniRef50_A8ZV84 Diguanylate cyclase with GAF sensor n=1 Tax=Desu...    70   5e-11
UniRef50_C0Q9U5 Putative reponse regulator (CheY and GGDEF domai...    68   3e-10
UniRef50_Q1JWC9 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto...    66   8e-10
UniRef50_C7LSE4 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac...    66   1e-09
UniRef50_Q0BQE3 Putative uncharacterized protein n=1 Tax=Granuli...    62   1e-08
UniRef50_B8HKT0 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 R...    52   2e-05
UniRef50_B7RSS4 GGDEF domain protein n=1 Tax=marine gamma proteo...    50   8e-05
UniRef50_Q5UW88 Sensor protein n=2 Tax=cellular organisms RepID=...    48   2e-04
UniRef50_B8G7Y2 Protein serine phosphatase with GAF(S) sensor(S)...    48   3e-04
UniRef50_Q8TRB0 Sensor protein n=2 Tax=Methanosarcina RepID=Q8TR...    48   3e-04
UniRef50_C1V4I2 PAS domain S-box n=1 Tax=Halogeometricum borinqu...    48   3e-04
UniRef50_A4J4M7 Sensor protein n=1 Tax=Desulfotomaculum reducens...    47   5e-04
UniRef50_A2SNX8 Transcriptional regulator, CdaR family n=1 Tax=M...    47   6e-04
UniRef50_D2RQU2 Putative PAS/PAC sensor protein n=2 Tax=Halobact...    46   9e-04
UniRef50_O28789 Sensor protein n=1 Tax=Archaeoglobus fulgidus Re...    46   0.001
UniRef50_C1AB53 Adenylate cyclase n=1 Tax=Gemmatimonas aurantiac...    46   0.001
UniRef50_Q4P3N9 Putative uncharacterized protein n=1 Tax=Ustilag...    46   0.001
UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase ...    45   0.002
UniRef50_C6D0G7 GAF sensor signal transduction histidine kinase ...    45   0.002
UniRef50_B0R9J3 Sensor protein n=1 Tax=Halobacterium salinarum R...    44   0.003
UniRef50_D2RUV6 Response regulator receiver modulated GAF sensor...    44   0.003
UniRef50_B9LMD0 Sensor protein n=1 Tax=Halorubrum lacusprofundi ...    44   0.003
UniRef50_Q1CWW4 Sensor protein n=5 Tax=Bacteria RepID=Q1CWW4_MYXXD     44   0.004
UniRef50_A8P5V6 HSF-type DNA-binding domain containing protein n...    44   0.004
UniRef50_C0G2J1 Putative PAS/PAC sensor protein n=1 Tax=Natrialb...    44   0.006
UniRef50_D2AY92 Serine phosphatase RsbU regulator of sigma subun...    43   0.009
UniRef50_Q3INK9 GAF domain protein; predicted DNA binding protei...    43   0.009
UniRef50_Q1D2B5 Response regulator/GGDEF/GAF domain protein n=2 ...    43   0.009
UniRef50_Q1IKT0 Sensor protein n=1 Tax=Candidatus Koribacter ver...    43   0.010
UniRef50_A9AWW6 Sensor protein n=1 Tax=Herpetosiphon aurantiacus...    43   0.011
UniRef50_C4XQM5 Putative uncharacterized protein n=2 Tax=Desulfo...    43   0.012
UniRef50_B8GBZ1 Sensor protein n=3 Tax=Chloroflexus RepID=B8GBZ1...    42   0.015
UniRef50_Q1PXD5 Putative uncharacterized protein n=1 Tax=Candida...    42   0.015
UniRef50_Q0SJD9 Putative uncharacterized protein n=3 Tax=Rhodoco...    42   0.018
UniRef50_A9WAB1 Sensor protein n=3 Tax=Chloroflexus RepID=A9WAB1...    42   0.018
UniRef50_B9LQ48 Sensor protein n=1 Tax=Halorubrum lacusprofundi ...    42   0.018
UniRef50_B2J240 Sensor protein n=1 Tax=Nostoc punctiforme PCC 73...    42   0.020
UniRef50_Q746T1 Sensor protein n=1 Tax=Geobacter sulfurreducens ...    42   0.021
UniRef50_C4FHI4 Putative uncharacterized protein n=1 Tax=Sulfuri...    41   0.023
UniRef50_A7HH95 Sensor protein n=1 Tax=Anaeromyxobacter sp. Fw10...    41   0.024
UniRef50_D2L155 GAF sensor hybrid histidine kinase n=1 Tax=Desul...    41   0.026
UniRef50_UPI0001C425B7 multi-sensor hybrid histidine kinase n=1 ...    41   0.028
UniRef50_B6A1B8 Sensor protein n=1 Tax=Rhizobium leguminosarum b...    41   0.030
UniRef50_C7NUQ8 Sensor protein n=1 Tax=Halorhabdus utahensis DSM...    41   0.035
UniRef50_B8HUB0 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 R...    41   0.036
UniRef50_A9AUL9 Anti-sigma-factor antagonist n=1 Tax=Herpetosiph...    41   0.038
UniRef50_A3CRU2 Sensor protein n=1 Tax=Methanoculleus marisnigri...    41   0.038
UniRef50_C5CH99 Sensor protein n=2 Tax=Bacteria RepID=C5CH99_KOSOT     41   0.047
UniRef50_Q5UXF3 Sensor protein n=1 Tax=Haloarcula marismortui Re...    40   0.049
UniRef50_Q1IMN3 Metal dependent phosphohydrolase n=1 Tax=Candida...    40   0.052
UniRef50_B9YRF1 Sensor protein n=4 Tax=Cyanobacteria RepID=B9YRF...    40   0.060
UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain)...    40   0.067
UniRef50_A0YG59 Putative uncharacterized protein n=1 Tax=marine ...    40   0.079
UniRef50_C7P2E1 Putative PAS/PAC sensor protein n=1 Tax=Halomicr...    40   0.082
UniRef50_P73011 PleD n=1 Tax=Synechocystis sp. PCC 6803 RepID=P7...    39   0.084
UniRef50_D2RWS1 Putative PAS/PAC sensor protein n=1 Tax=Haloterr...    39   0.087

>UniRef50_B3PEI7 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria
           RepID=B3PEI7_CELJU
          Length = 231

 Score =  228 bits (583), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 5/230 (2%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           +L      L+   V  YL  +P+FF ++   +  + +PH     VSLVE  +A  R    
Sbjct: 5   KLPTLADPLEPEQVAAYLQAHPDFFAQHPELLAELSLPHESGAAVSLVERQVAILRERNM 64

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRL 125
            +   ++ L++ A  N+ LF +   L  SL     + D+L    + + +D G+   S+ L
Sbjct: 65  DMRHRLSKLLDNARENDKLFDKTKRLVLSLLEGQDMGDVLDALYYSFDKDFGIHFTSVLL 124

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSV 184
           F +  ++  PS+   +    ++ E +    +   +   G L   EL  +    A  +GSV
Sbjct: 125 FGNPDKI--PSSQARIVSMGEAREHIAP-LIKNSRAMCGTLGSAELAFIFGAHAGEIGSV 181

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           A   L   +  G++   +RD  +Y+   GT  L  IA +L  LL   + R
Sbjct: 182 ATVPLMHGSAFGLLAIGNRDPHYYRSSMGTLFLGYIAEVLNRLLPPHLPR 231


>UniRef50_Q21P79 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans
           2-40 RepID=Q21P79_SACD2
          Length = 227

 Score =  227 bits (579), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 5/228 (2%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV 67
           +      + D+ V +YL +NP+FF++++R +  + +PH     VSLVE  ++  R+    
Sbjct: 1   MSNRDASITDQRVAEYLAENPDFFVKHSRLLGELELPHDSGKAVSLVERQVSVLRDRNMD 60

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLF 126
           + + ++ L++ A  N+ LF +   L  +L   + L D++    + + ++  +    L +F
Sbjct: 61  MRQRLSNLLDNARENDRLFEKSKRLVLALLECNDLGDLVDALYYSFDKEFNIQHTRLIIF 120

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSVA 185
            +   +  PS    +     + + +  +R+   +   G +   E   +   +A  +GS A
Sbjct: 121 GNHQTV--PSTAARIENLHVARD-VIGRRIKSPKAVSGGIKDDECKFLFDKDAPHIGSAA 177

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           MS+L     LGV+   + D   Y  G GT  L  IA +L  LL ++I+
Sbjct: 178 MSVLIHSKPLGVLAIGNEDPKFYHSGMGTIFLGYIAEVLNRLLPKYIK 225


>UniRef50_B7S2B7 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2148 RepID=B7S2B7_9GAMM
          Length = 228

 Score =  222 bits (567), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 6/232 (2%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M     +     TEL D  V +YL  N +F  RN   ++ + + H     VSLVE  ++ 
Sbjct: 1   MSNEQAQAIAPATELSDEQVREYLKLNGDFLQRNPDMLDHLHISHASGSAVSLVEKQVSV 60

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLA 119
            R     +   +  L   A  N+ L+ +   L  +L  A +LD +   F     +D  + 
Sbjct: 61  LRERNIDMRHRLNALTANARDNDKLYEQTRKLVLALLDARNLDSVYSAFMDAMEKDFKVD 120

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
            ASL LF +       S+      + ++ +      L   +   G L   EL  + P+A 
Sbjct: 121 YASLILFGEPS-----SDGKCRVETSEAAKIEIGALLKGRKPVCGVLRKEELAYLFPDAG 175

Query: 180 AVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            VGS A+  L +  +LG++   S DA+ Y    GT  L  IA ++  LL   
Sbjct: 176 EVGSAALMPLANGEELGLIAVGSADANRYGSSMGTLFLTHIADVIVRLLPHL 227


>UniRef50_P55886 Uncharacterized protein yigA n=156 Tax=Enterobacteriaceae
           RepID=YIGA_SALTY
          Length = 235

 Score =  221 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 202/235 (85%), Positives = 216/235 (91%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           MKQP EELQETLTELDDRAVVDYL  +PEFFIRNA AVEA+RVPHPVRGTVSLVEWHMAR
Sbjct: 1   MKQPEEELQETLTELDDRAVVDYLRHHPEFFIRNAHAVEAMRVPHPVRGTVSLVEWHMAR 60

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
           ARNHI+VLEENM LLMEQA ANE LFYRLL+LQ  L AA SLD+ML+RFHRWARDLGLAG
Sbjct: 61  ARNHINVLEENMTLLMEQAHANESLFYRLLHLQSRLVAADSLDEMLVRFHRWARDLGLAG 120

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           A+LRLFPDRWRLGAPS +THLAL+RQ+FEPLRIQRLGQ QHYLGPLNGPELLVVLPEAKA
Sbjct: 121 ATLRLFPDRWRLGAPSRYTHLALNRQAFEPLRIQRLGQSQHYLGPLNGPELLVVLPEAKA 180

Query: 181 VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           VGSVAMSM+GSD  LGV+LF+SRD  HYQ GQGTQLL EIALMLPELLERWI+RV
Sbjct: 181 VGSVAMSMMGSDGGLGVILFSSRDPHHYQPGQGTQLLQEIALMLPELLERWIKRV 235


>UniRef50_Q1YSU9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium
           HTCC2207 RepID=Q1YSU9_9GAMM
          Length = 228

 Score =  215 bits (549), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 7/229 (3%)

Query: 9   QETLTELD--DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
            E  TE+D  ++ V ++L  NP+F  +N   +E + +PH     VSLVE  +   R+   
Sbjct: 3   NEIETEVDPIEKVVGEFLRDNPDFLDKNTDILETMVLPHISGKAVSLVERQVGVMRDRNR 62

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRL 125
            +   +  +++ A  N+ LF +   L  +L  A +L  ++        +D G+   SL L
Sbjct: 63  EMRSRLENILQTAKDNDLLFEKTKRLVLNLLEAKTLGALVEAVYDSLGKDHGIEFYSLTL 122

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSV 184
           F D  +L  P     +A + ++ E +    +G  +   G L   E++ +  E  + VGSV
Sbjct: 123 FGDEKKL--PRTMARIASTEKANERV-GTLIGANRAVCGILREDEMVFLFGERGRQVGSV 179

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           A   L  D+  G++   + D + Y+   GT  L  IA +L  +L   ++
Sbjct: 180 AAVPLRYDSLYGILAVGNSDPNFYKSSMGTLFLSYIAEILNRVLPNHLK 228


>UniRef50_Q47JM9 Putative uncharacterized protein n=2 Tax=Betaproteobacteria
           RepID=Q47JM9_DECAR
          Length = 223

 Score =  215 bits (547), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 10/228 (4%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEE 70
           ++ +    + +YL  NP FF + A  +  I VPHP  G  VSL E  M   R      E 
Sbjct: 1   MSAMFPEEIAEYLKNNPSFFEQYADLMAQIFVPHPHGGRAVSLAERQMLTLREKNRSTES 60

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDR 129
            +A L+     N+ +  ++  L  +L AA +   ++   +   R D  +   +LRL+   
Sbjct: 61  KLAELIAFGEENDQISEKVHRLSVALIAAETFQAVIHLLNFHLRDDFSVPHVALRLWDKP 120

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSM 188
             +        ++   Q F           + Y G   G        E A  + S A+  
Sbjct: 121 EEIEGLPEFAAVSEELQVFAETLA------RPYCGSTAGFGTASWFGEHASHIRSQALIA 174

Query: 189 LGS-DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           L +    +G++   S DA  +    GT  L  +  M+   L R  + V
Sbjct: 175 LRNGGGTIGMIALGSEDAQRFYADMGTLYLERLGEMVSAALARVTKSV 222


>UniRef50_Q3JEA1 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani
           RepID=Q3JEA1_NITOC
          Length = 244

 Score =  212 bits (541), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 12/236 (5%)

Query: 2   KQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARA 61
           K P EE+QE      ++++  YL  +P+FF R+   +  + +PHP    +SLVE  +A  
Sbjct: 12  KTPLEEVQER-----EQSIAKYLQTHPDFFARHPDLLSELTIPHPSGAAISLVERQLALL 66

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAG 120
           R     L+  +  L+E A+ N+ L  ++  L   +  A++    +       +    +  
Sbjct: 67  RGQNRELKRQLRDLIENAMVNDDLSKKVHKLALGVLTAATPQAAIEVLFSSLQTGFDVDV 126

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEP----LRIQRLGQEQHYLGPLNGPELLVVLP 176
            +LRLF D   L  P+   HL + R S       +    L   Q   G L   +   +  
Sbjct: 127 IALRLFFDGKSLPPPAPD-HLNVMRVSRNAPELEVFASVLKSPQPICGRLTVEQRDYLFG 185

Query: 177 -EAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            EA+   S A+  LG +   G++   S++ + ++   GT  L  + +++   L R 
Sbjct: 186 EEAERAVSCALIPLGEEQRRGMLAMGSQEPNRFRADLGTIFLDYLGVIVERALHRH 241


>UniRef50_Q60AJ3 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus
           RepID=Q60AJ3_METCA
          Length = 234

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 5/232 (2%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
           G+  +    ++    V DYL K+P+FF      +E++ VPHP    VSLV   +   R  
Sbjct: 4   GKARRTERADISASQVADYLWKHPDFFHDQLDLLESMHVPHPCGEAVSLVARQIELLRGK 63

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASL 123
               +  +  ++  A  N+ LF R   L  +L  A+S+DDML                S+
Sbjct: 64  NRKQQGQLNDILRIARENDALFARFHRLTLTLLDAASVDDMLAGLKWSLHEGFQADFVSV 123

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVG 182
           R+F     +  P+      +   +   L    L   +   G    P L  +   +A  V 
Sbjct: 124 RVFR---TVAHPAVGDLHVMPDPAVSILLEPLLASCEPVCGSPPEPLLEFLFGADAPDVA 180

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           S A+  L      G++   S DA  +    G   L ++  ++   L   I+R
Sbjct: 181 SCALVPLCHAGIKGLLAIGSFDAGRFTPEMGNLFLVQMGEIVAARLVALIDR 232


>UniRef50_O05323 ORF 240 protein n=25 Tax=Pseudomonadaceae RepID=O05323_PSEFL
          Length = 240

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 9/231 (3%)

Query: 4   PGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARN 63
           P  +  E+ +  +  AV  YL  +P+FF+ +   +  +R+PH    TVSLVE  M   R 
Sbjct: 8   PAPQPDESPSLPETAAVAAYLEAHPDFFVEHEELLATMRIPHRRGDTVSLVEHQMKILRE 67

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGAS 122
               +   ++ LM+ A  N+ LF +   L  +L  AS+L+D++M      R D  +   S
Sbjct: 68  RNIEMRHRLSHLMDVARDNDRLFDKTRRLILALMDASTLEDLVMSVEDSLRQDFQVPFVS 127

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEA--KA 180
           L LF D              ++    +      L +++   G L   EL  +  E   K 
Sbjct: 128 LILFGDNAMPVG------RWVTHAEAQTAIGGLLTEDKSVSGSLREHELDFLFGEEQRKQ 181

Query: 181 VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +GS A+  +      GV+   SRD  HY+   GT  L  IA +   +L R 
Sbjct: 182 IGSTAVVAIAHQGLHGVLAIASRDPQHYKSSVGTLFLSYIAEVTGRVLPRV 232


>UniRef50_Q2SQ63 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SQ63_HAHCH
          Length = 243

 Score =  211 bits (537), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 5/236 (2%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M    +   E    L   AVV YL ++P FF+ +   +  IR+PH     +SLVE  ++ 
Sbjct: 1   MNNQAKRSDENPA-LTAEAVVAYLREHPNFFVEHEELLNEIRLPHRSGAAISLVERQISL 59

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLA 119
            R      E  +  L++ A  N+  F +   L  +L  A SLD++++     +  D  + 
Sbjct: 60  FREQRDHYERQLYDLIDTARQNDRFFEKSKRLLMNLLEARSLDEVVIVLEDSFTGDFQVD 119

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-A 178
             SL LF +      P ++   A   +  + L  + L   +   G L   +L V+ P   
Sbjct: 120 FCSLVLFAEHKDF--PISNVSTASLMECSDALGEELLNSVKAVCGNLEARQLQVLFPHNH 177

Query: 179 KAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             + S A+  L     LG++   SR+  ++  G G+  L  I+  L  +L   + +
Sbjct: 178 ADIASCAVIPLRYGDLLGMLSIGSRNERYFNTGMGSLFLSYISESLSRMLPPLLAK 233


>UniRef50_Q0AFS2 Putative uncharacterized protein n=2 Tax=Nitrosomonas
           RepID=Q0AFS2_NITEC
          Length = 233

 Score =  210 bits (534), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 89/222 (40%), Gaps = 5/222 (2%)

Query: 16  DDRAVVDYLIKNPEFFIRNARAVEAIRVPHP-VRGTVSLVEWHMARARNHIHVLEENMAL 74
               VV YL  +P+FF  N   +E++  PHP     +S+ E  +A  R    +L+  +  
Sbjct: 3   TSEEVVQYLQDHPQFFEENPDLMESLHFPHPYEGRAISINERQVAMLREKNRLLQSRLQE 62

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLG 133
           L++    N+ +  ++  L  +L +  SL +ML         D  +   +LRL+       
Sbjct: 63  LVDVGEKNDVIGEKMHRLTVALLSFDSLPEMLHGLQYHLCEDFSIPHVALRLWQIDELGT 122

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSMLGSD 192
                       Q+   + I   G    Y GP    E+      +A+ + S A+  L   
Sbjct: 123 Q--ADLPSPEFNQTSSNIHILAQGMPHPYCGPEIDDEIRQWFEMDAEYLQSFALIPLKKQ 180

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           +  G+++  S +   +    GT  L  +  M+   + R I++
Sbjct: 181 SGFGLLVMASPEVERFFPDMGTLYLERLGDMVSSSITRLIQQ 222


>UniRef50_A7BTH8 Protein containing DUF484 n=1 Tax=Beggiatoa sp. PS
           RepID=A7BTH8_9GAMM
          Length = 240

 Score =  208 bits (529), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 8/239 (3%)

Query: 1   MKQPGEELQETLT-----ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVE 55
           +K P +  Q+T T     ++ ++ VV+YL + P+F  ++   +  + +P      VSLVE
Sbjct: 2   IKTPSKNFQQTKTSQQTEQISEQTVVEYLKQFPDFLTQHDELLAVMEIPSDSSKAVSLVE 61

Query: 56  WHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WAR 114
             +   R     L+     L+  A  N  L  R+ +L  +LT    +++     +     
Sbjct: 62  RKLEGLREENQQLQAKWEGLVAIAEQNAQLNQRIQHLVATLTNVEGIEEFFQTLYSTLCN 121

Query: 115 DLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV 174
           +       +R F       A S    +    Q F  L    L   +   G L+  +L  +
Sbjct: 122 EFNTDTVVIRWFELPHSPIAVSRQEFIEYDAQVFT-LFDSVLESHEPLCGQLSTEQLEFL 180

Query: 175 LPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            P+   + S  +  LGS    G+++  S DA  +    GT  L  +  ++  LL+ W+ 
Sbjct: 181 FPD-SQIASAVLIPLGSPKAQGLLVMGSHDAERFHADMGTDFLQFMGELVSHLLKLWLR 238


>UniRef50_A1TXX8 Putative uncharacterized protein n=3 Tax=Marinobacter
           RepID=A1TXX8_MARAV
          Length = 249

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 4/232 (1%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
            +  ++   EL    V +YL  NP+FFI     + ++ +PH     +SLVE  +   R  
Sbjct: 3   EQTARQKAGELTREQVAEYLRANPDFFIGQDELLRSLTLPHDSGRAISLVERQVHLFREQ 62

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASL 123
              L   +  L+  A  N+ LF +   L   +  A +L DM        R D GL  AS+
Sbjct: 63  RDTLRRELVELVSIARHNDRLFEKSKRLLMQVIEARNLQDMAAAIDDSIRGDFGLDAASV 122

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVG 182
            LF +  +L   S      +   +        L  E+   G     E   + P+  + + 
Sbjct: 123 LLFSETGQLQ--SQGALHMVDAAAARERLGSLLEGERAVCGQFRENEREFLFPDRDEPIA 180

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           SVA+  L  +  +GV    S +  ++ Q  G+  L  I+  L  LL   ++R
Sbjct: 181 SVALVPLRHEGLVGVFAVGSCEPGYFDQSMGSLFLSYISDTLSRLLPPMLKR 232


>UniRef50_B5JX80 3',5'-cyclic-nucleotide phosphodiesterase n=1 Tax=gamma
           proteobacterium HTCC5015 RepID=B5JX80_9GAMM
          Length = 226

 Score =  207 bits (526), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 8/230 (3%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
            +   +T T LDD+ V  YL  +P+FF ++   +  +RVPHP    +SLVE  +   R  
Sbjct: 3   SDSDNKTATTLDDKTVASYLKDHPDFFDKHLDLLALLRVPHPSGDAISLVERQIDLLRQQ 62

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASL 123
              LE+ +  L+  A  N+ +   L  L + L  A SL D +       R+  GL  A L
Sbjct: 63  NRGLEDKLMELVNIARDNQRVTDHLHTLAKELVEADSLSDAVTATRDVLREQFGLEVAQL 122

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVG 182
             +         SNHT   +S+        +   + +   G +   +  +V  E +  V 
Sbjct: 123 HFYE------GVSNHTEATISQNQRIAHFGEISQERRPICGHVTPQQRDIVFGEERFQVK 176

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           S A+  L    ++G++   S D + +    G   L +++ ++   + R +
Sbjct: 177 SAALVPLYQGENIGILALGSSDEARFHPSMGVFFLSQLSALVSSSIARHL 226


>UniRef50_D2TWV4 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae
           RepID=D2TWV4_9ENTR
          Length = 251

 Score =  206 bits (524), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 120/225 (53%), Positives = 156/225 (69%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
           +    LDD+ VV+YL  NP FFIRNA AVE +RVPHPV   VSLVEW M R R  I  LE
Sbjct: 26  DPQPLLDDQTVVEYLKSNPHFFIRNAAAVEQMRVPHPVHHAVSLVEWSMKRQRVCIQNLE 85

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDR 129
           ++M LL+EQA  NE LF RLL L   L+ A    D   R + W+R  GL+GA +RLF D 
Sbjct: 86  QDMQLLVEQARNNEILFNRLLKLVIQLSTADDFADFQQRLYAWSRSFGLSGAYIRLFSDC 145

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
           W+LG P +   + +SRQ+FEP+RIQR G + HYLG LN PE+L+++P+A  VGSVA+S+L
Sbjct: 146 WQLGVPMDAQKVMISRQAFEPVRIQRFGGKNHYLGTLNNPEILLLMPDANHVGSVAVSLL 205

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           G   +LG+V+F+SRD  HYQ+G GT +L  +A +LP+LL RW+ R
Sbjct: 206 GLYGNLGMVIFSSRDIQHYQKGMGTTMLDHLAKLLPDLLLRWVTR 250


>UniRef50_A6T2Z5 Uncharacterized conserved protein n=72 Tax=Burkholderiales
           RepID=A6T2Z5_JANMA
          Length = 222

 Score =  205 bits (523), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 11/226 (4%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEEN 71
           + LD   V DYL+ NP+FF  +A  +  I++   + G T+SL E  M   R  + V+E  
Sbjct: 3   SPLDSNTVADYLLDNPQFFEEHAELLSRIKLSSALGGRTLSLQERQMDVLREKLKVMELR 62

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRW 130
           +A LM     N+ +  +     R+L  A +  D+        +    +   +LRL+    
Sbjct: 63  LAELMRIGQENDQITRKFHTWTRALLQARNDVDLPHTLTTGLQSAFSVPHVTLRLWGVSE 122

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
                     ++   + F        G    + G  N  E    L +A A+ SVA+  L 
Sbjct: 123 AFAHTWFAAPVSADSRLFSN------GLTTPFCGSNNDFEAASWLEDAPAIQSVALLPLR 176

Query: 191 SD---ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            D      G+++  S D   +     T  L  I       L   ++
Sbjct: 177 LDDATEAFGLLVLGSPDPHRFTSDMATDFLTNIGQTASAALSGMLD 222


>UniRef50_C6MFM7 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212
           RepID=C6MFM7_9PROT
          Length = 235

 Score =  203 bits (518), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 9/220 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPV-RGTVSLVEWHMARARNHIHVLEENMA 73
           +    V  YL ++P+FF + A  +  +++ HP     +SL E  +   R    VL++ + 
Sbjct: 1   MKPEEVAQYLQEHPQFFNQYADLLADLQICHPQDEKVISLNERQIIALRERNRVLQDKLL 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            L+     N+ +  ++  L  +L + S++D++    +     D  +   ++RL+      
Sbjct: 61  ELISFGEENDAIGEKMHRLVIALLSVSNIDELFHALYFSLKEDFAIPLVAMRLWNVANVT 120

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
            + +  T ++      E +R       Q Y G     E+     E A+ + S AM  L +
Sbjct: 121 KSHAEFTPVS------EDVRTIAESLPQPYCGNHIADEIKQWFGEGAEHLNSFAMIPLNT 174

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              +G+V+  S DA  +    GT  L  +  ++   + R+
Sbjct: 175 ARTIGLVVLGSPDAERFYTEMGTLHLKRLGELVCTTVTRY 214


>UniRef50_A1K307 3',5'-cyclic-nucleotide phosphodiesterase n=3 Tax=Rhodocyclaceae
           RepID=A1K307_AZOSB
          Length = 217

 Score =  202 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 82/224 (36%), Gaps = 12/224 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG--TVSLVEWHMARARNHIHVLEENM 72
           ++   V  YL  NP+F  ++      + VPHP  G   +SL E  +   R+ I  LE  +
Sbjct: 1   MNPNDVARYLRDNPDFLAQHGELFTELTVPHPQHGGQAISLAERQLYALRDKIRQLESKL 60

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
           A L+     N+ +  ++  L  +L  A     +     +    D  +   +LRL+     
Sbjct: 61  AELIRFGEENDDISEKVHRLAVALLGARGYAAVRQALFNCLQEDFAVPHVALRLWDVGGE 120

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML- 189
              P             E  R+  L       G     E++    E A  + S+A+  L 
Sbjct: 121 GTGPDFDA-------VSEAARLHALDLRHPSCGAPGSIEIVGWFGEAAPHIRSMALMPLR 173

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
                +GV+   S +   +    GT  L  IA +    L R + 
Sbjct: 174 RQGETVGVLALGSEEGERFYPEMGTLYLGRIAELCAAALLRELA 217


>UniRef50_Q1N420 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri
           RepID=Q1N420_9GAMM
          Length = 216

 Score =  202 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV 67
           +Q+   +L ++ V  +L ++P+FF +     E + +PH   G VSLVE+     +     
Sbjct: 1   MQQDEKQLSEKEVAAFLKQHPDFFRKFPDLTEQLDIPHDTGGAVSLVEYQSRLLKEKNTE 60

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLF 126
           L   +  L+E A  N+ LF +   L   L  A S++++        R   G+  A + LF
Sbjct: 61  LHSRLQQLIENARRNDRLFEQTRRLTLDLLDAQSIEEVEQSLQDSMRVVYGVDYACITLF 120

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAM 186
                + A        ++    +   +Q  G++Q   G L+  E+ +   E   VGS+A 
Sbjct: 121 VPAMSMQA--------VTEVEMQHQLLQHFGRKQAICGQLSDEEMELFFHEDNKVGSMAA 172

Query: 187 SMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            +L +D  LG++    R   +++    T  L  +A ++   L+  +
Sbjct: 173 CLLKND--LGILSLGHRSEEYFKSNMDTLFLDYVAEIVSRRLDILL 216


>UniRef50_A0Y9E1 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0Y9E1_9GAMM
          Length = 231

 Score =  202 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 92/222 (41%), Gaps = 5/222 (2%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           ++ +  V  +L  +  FF+++   +  + + H     VSL+E  ++  R     + + + 
Sbjct: 12  DITEEQVAHFLKSHSGFFLKHDDLLVDLTLAHDSGHAVSLLERQVSLLRERNVDMRDRLN 71

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            L++ A  N  LF +   L  +L  A SLD ++  F+     D  +  +S+ LF D  + 
Sbjct: 72  SLLDSAKTNGHLFEKTKQLVLALIDAQSLDAIVNTFNRSLLSDFVVDFSSMTLFGDAAQ- 130

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
               +     +   +        L       G L   EL  +  E A  + S A+  L  
Sbjct: 131 --HDSTLSRMVPVDTAYATIPGLLKSNGTTAGVLRPEELQFLFSEQADQISSAAVVALNH 188

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
              LGV+   S+D  H+    GT  L  IA +L  +L + ++
Sbjct: 189 TKPLGVLAIGSKDPDHFSSDMGTLFLEYIAEVLNRVLPQHLQ 230


>UniRef50_C7RPB7 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1 RepID=C7RPB7_9PROT
          Length = 217

 Score =  200 bits (510), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 10/223 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           +    V  YL  NP+FF  +A  V  + VPHP  G T+S+ E  M   R+    LE  M 
Sbjct: 1   MKAEEVAHYLQNNPQFFELHADLVANMVVPHPHSGRTISITERQMLALRDKNRQLEGKMG 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRL 132
            L++    N+ +  ++  L   + AA S   +L   +   R D  +   ++RL+      
Sbjct: 61  ELLQFGEENDEISQKMHRLAVGMIAARSFQAVLHTLNLHLRDDFDVPHVAVRLWRHPEGN 120

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVGSVAMSMLGS 191
                   ++   Q+F             Y G  +G E      EA   V S A+  +  
Sbjct: 121 DDLPEFAEVSQELQAFAETL------TLPYCGSTSGFETSSWFGEASLHVRSQALIAMRD 174

Query: 192 -DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               +G++   S D   +    GT  L  +  M    L R + 
Sbjct: 175 GGGTIGMIALGSEDLERFYTQMGTIYLERLGEMASAALARVLR 217


>UniRef50_Q2BRF9 Putative uncharacterized protein n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BRF9_9GAMM
          Length = 228

 Score =  199 bits (506), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 7/223 (3%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           ++ +  V +YL ++P+FF RN + +E + VPH     VSL+E      R     L  +++
Sbjct: 8   QILESQVAEYLAQHPDFFSRNVKLLEKLHVPHETGRAVSLIERQTTVLREKNQNLTAHLS 67

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            L++ A  N+  F +   +  +L  A +LDD+ +       +D      +L LF  +   
Sbjct: 68  DLIDIARHNDLQFEKTKRMVLALLEAETLDDIAVAIDESLCQDFASDSTALILFTSK--- 124

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSMLGS 191
             P +  +L L  +         +G      G L+  E   +   E+  V S A+  L  
Sbjct: 125 --PLDVNNLRLMLRDDATAISNLIGTNLPTCGRLSEVENQFIFADESVKVQSAAVIPLVQ 182

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
              LG++   S DA+++   QGT LL  +  +L  +  R + +
Sbjct: 183 GETLGLLAIGSFDANYFSSSQGTVLLSYVGEVLSRVAYRILRQ 225


>UniRef50_C4LDU7 Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187
           RepID=C4LDU7_TOLAT
          Length = 228

 Score =  199 bits (506), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 1/226 (0%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV 67
           +    + L++  + DYL ++P+FF+R+   +E I VPH  RGTVSL +  + R R  +  
Sbjct: 1   MGALESMLEENRIADYLKQHPDFFLRHKELLEEIAVPHEQRGTVSLFDVKLERQRERLQQ 60

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFP 127
           LE+    L+  A  NE +F     +  +L A +S+  +    H   R+  L   +  L+ 
Sbjct: 61  LEDERQELLANATRNEFIFRVYTDVYPALFACTSMRQLWKCLHSTFRE-RLRIPACALWV 119

Query: 128 DRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMS 187
           ++ R+ A        +    F+ L +  +  +  Y G +N  +  ++  +   V S+A+ 
Sbjct: 120 NQARVKAKRFDKPYEMEYPLFQRLCLYPMADQLVYFGRVNDCDRELIFGQGSLVHSMALL 179

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            LG   + G + F   +  HYQ G  + LL ++   +  LL     
Sbjct: 180 RLGEYGEWGFLAFGHANPQHYQPGMDSLLLEQLGRFVTLLLPTLAR 225


>UniRef50_A4A9F1 Putative uncharacterized protein n=2 Tax=unclassified
           Gammaproteobacteria RepID=A4A9F1_9GAMM
          Length = 218

 Score =  198 bits (504), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 6/218 (2%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +D+  + D+L++NP++F +N   +  I VPH     VSLVE  ++  R+    L   +  
Sbjct: 1   MDEDDIRDFLVQNPDYFQKNPELLGLIEVPHASGAAVSLVERQVSVLRDRNVDLRHRLRD 60

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLG 133
           L   A  N+ +F     L   L  A +++++     R  RD   +  ASL LF +     
Sbjct: 61  LGSTAKDNDQMFADTRQLVLGLLPAKTVEELEGALIRVLRDIFDIEYASLTLFEEAAE-- 118

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML-GSD 192
                    +     +      L +     G L   +   + P A  VGS A++++  + 
Sbjct: 119 --HAGAVRRVPESQLKGKLGGLLVRGNAGCGALRADDFEFLFPGATLVGSAAIALIESNG 176

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
             LG +   S DA HY    GT  L   A ++  LL+R
Sbjct: 177 KALGALAVGSSDAGHYDSDMGTLFLEFAAEVIAGLLQR 214


>UniRef50_Q1H4W9 Putative uncharacterized protein n=2 Tax=Methylophilaceae
           RepID=Q1H4W9_METFK
          Length = 229

 Score =  197 bits (500), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 6/230 (2%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARN 63
             +      ++ +  V+ YL  +P+FF  +   +  + +P P   GTVSL E      R+
Sbjct: 2   EAQDHNNEQQVTEYQVMSYLRAHPQFFEHHTGLLAELYLPSPHGQGTVSLAERQQLAQRD 61

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGAS 122
            I VL+  +A LM+    N+ +  ++  L   L A   ++ ++    H    D  +   S
Sbjct: 62  RIRVLDAKLAQLMKYGEENDAIGEKVHRLSLGLLATERMEVLVSLLEHSLHEDFQVPYVS 121

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVG 182
           LRL+      G    +  L +     + L+    G    Y G   G  L           
Sbjct: 122 LRLWAKPRESG----NGSLPIFASVDQELQRWAQGLATPYCGNRPGMPLQGWFGVEARPA 177

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           S A+  L +    GV+   S D   +    GT  L  I+ ++   L R I
Sbjct: 178 SFAVMALKAQQVFGVLALASDDDKRFYPDMGTLYLKRISELISAALLRHI 227


>UniRef50_B5FCQ9 3'-5'-cyclic nucleotide phosphodiesterase n=3 Tax=Aliivibrio
           RepID=B5FCQ9_VIBFM
          Length = 234

 Score =  196 bits (498), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 18/235 (7%)

Query: 6   EELQET--LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARN 63
           E+ QE    TEL +  V  +L  +P+FF ++   +  I+V  P RG VSLVE  + + R 
Sbjct: 3   EKQQEYIEPTELTEDIVAQFLTDHPDFFQKHPELLNRIKVDTPERGVVSLVEVQVNKLRG 62

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASL 123
            I  LEE +  LM  A  N+ LF+    +Q+ L  + +    +    + A +L L     
Sbjct: 63  RIGELEEEITQLMSLAAQNDRLFHEFSSIQKQLLLSENFSQAVAIIEKKAIELNLTAH-- 120

Query: 124 RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEA----- 178
                        +H    + + + +    + L     YLG L   +   +         
Sbjct: 121 -------IKIVEHSHPKYHVEQSALDNFVKKFLNGHSAYLGRLRKTDRDSLFAYGGLDLS 173

Query: 179 -KAVGSVAMSMLGS-DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              +GS A+  LG+    +G++ F SRD  H+Q   GT  L ++  +   LL +W
Sbjct: 174 SSDLGSFAILPLGASSKPMGIIAFASRDGGHFQPNMGTLFLEQLVSVFHYLLTQW 228


>UniRef50_A4BTZ4 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231
           RepID=A4BTZ4_9GAMM
          Length = 229

 Score =  195 bits (496), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 6/225 (2%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
           +    LD+  + +YL ++P+FF+R       + +PH VR   SL+E+ +   R+    L 
Sbjct: 4   QRAESLDEILIAEYLRRHPDFFLRQRELAAELHIPHDVRPARSLIEYQVQVLRDETARLR 63

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPD 128
             +  L+  A +N+ L  +L  L   L  A SL+ +         +   +    + L   
Sbjct: 64  ARLDELLRIARSNDRLMRQLHRLTLELLDADSLETVCDALRQSLQQSFHVDAVHIILITA 123

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMS 187
                    +  +            + LG ++   G LN  ++ +   E A  V S A+ 
Sbjct: 124 LPAQA----NASVWPPDHPSAARLAKLLGGDRPICGRLNDEDMRLAFGELATGVKSAALI 179

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            L   A  G++   S +  HY+  QGT  L ++  +L   ++R +
Sbjct: 180 PLADGATQGLLAIGSHNPKHYRPDQGTIFLRQLGALLERAIQRHL 224


>UniRef50_B8GT90 Putative phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp.
           HL-EbGR7 RepID=B8GT90_THISH
          Length = 228

 Score =  195 bits (496), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 9/226 (3%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEE 70
               L + AV  +L  +P+FF R+   ++ +++PH   G VSL+E  +   R+    LE 
Sbjct: 8   AEEALSEEAVEAWLRSHPDFFERHLALLDVLKLPHASGGAVSLIERQIGWLRDKNRQLER 67

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDR 129
            +  L++ A  NE L   + +L   L  A SLD +L       R +       +RL  D 
Sbjct: 68  KLLDLVQLARENERLSQHMHHLALGLMDADSLDAVLATTQEQLRTEFRADHVVVRLLGD- 126

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK-AVGSVAMSM 188
                P+   H                   +   G L+  +L  +LPEA   V S     
Sbjct: 127 -----PAQGLHFVAEGDPALNSLESLFETRRPLCGRLSDEQLTALLPEADTPVQSAVAVP 181

Query: 189 LGS-DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           L   +  LG++   SR+ + +  G GT  +  +  ++   +   ++
Sbjct: 182 LMDGNRRLGILALGSREDTRFHPGMGTLFIGYLGEIISHAVATRLK 227


>UniRef50_D0Z0U0 Putative uncharacterized protein n=1 Tax=Photobacterium damselae
           subsp. damselae CIP 102761 RepID=D0Z0U0_LISDA
          Length = 240

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 4/228 (1%)

Query: 9   QETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVL 68
           Q +  EL    V  YL K P+FF R+   +  IRV H  RG VSLV+  + + R  +  L
Sbjct: 10  QASCDELSAEQVASYLRKEPDFFARHPELLSQIRVHHDERGAVSLVDIQLEKLRGQVTQL 69

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPD 128
           ++ +  L +QA  N+ LF +   LQ  L  A  L  ++    ++A+   L   S+RL  +
Sbjct: 70  QDQLEQLTDQAKRNDQLFQQFSSLQAKLMQARCLQQVMPLMEQFAQQYQL-NISIRLLAE 128

Query: 129 RWRLGA---PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
                      N     L R+SF   +   + Q+  YLG L   +  +   +   +GS A
Sbjct: 129 PEAAKPLLKEINSDVAWLLRESFTQFQRSFMPQQNIYLGRLRHGQAALFFSQPPDLGSFA 188

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           +  L     LGV+ F+S +  H+     T  L ++A+++   L  W++
Sbjct: 189 LLPLKQHQTLGVLGFSSTEGGHFHPAMDTLFLQQLAIVMSSQLALWLD 236


>UniRef50_C3X4I5 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes
           RepID=C3X4I5_OXAFO
          Length = 225

 Score =  194 bits (494), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 12/225 (5%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPV-RGTVSLVEWHMARARNHIHVLEEN 71
             +D   V  YL+ +P+FF  +A  +  +R+  PV   TVSL E  +   R+    LE  
Sbjct: 3   QAIDSNTVAQYLVDHPDFFETHADILPGLRLTSPVIGKTVSLHERQIEVLRSKHKALELQ 62

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRW 130
           ++ LM  A AN+ L  ++L     L    +   M        +   G+   +LRL+  R 
Sbjct: 63  LSRLMHAAQANKTLMEKILDWTCPLLKEQNDAAMPQTIVSGLQSVFGIPAVTLRLWNIR- 121

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEAKAVGSVAMSML 189
                  +     ++ + E +R    G    Y G +    E +  L  A  + SVA+  L
Sbjct: 122 -----PEYADSWFTQHASEDIRNAANGMSHPYCGKVPENQEAVKWLDHAAEIRSVAIVPL 176

Query: 190 GSDA---DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +       G+++  S DA+ +Q    T  L +I  +    L+  
Sbjct: 177 KTGPESLPFGLLVMGSPDATRFQNDMATDFLDDIGKLASAALDHL 221


>UniRef50_Q2Y5Y9 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis
           ATCC 25196 RepID=Q2Y5Y9_NITMU
          Length = 232

 Score =  194 bits (494), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 9/216 (4%)

Query: 18  RAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMALLM 76
             + +YL  NPEFF  +A  +  I+VP+P  G  +SL E  +   R    +L++ +  L+
Sbjct: 19  EEIAEYLRANPEFFEAHASMLADIQVPNPHDGRAISLSERQILALREKNQILQDKLEELI 78

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAP 135
                N+ +  ++  L  SL A   L D+L       R+   +  + LR++        P
Sbjct: 79  LFGKENDAIAEKMHKLAVSLLAFRRLPDLLDGLTFALRESFLVPHSVLRIWNIGIDGPLP 138

Query: 136 SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGSDAD 194
                ++    +     +        Y GP    E+     E A+ + S AM+ L  D  
Sbjct: 139 PEFLPVSSEVHAMAENLL------HPYCGPHVPDEIRSWFGEQAEHLRSFAMTALHGDQT 192

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           +G+++  S ++  +    GT  L  +  +    L+R
Sbjct: 193 IGLLVMGSEESQRFYPEMGTVYLGRLGELASASLKR 228


>UniRef50_A8TB79 Site-specific tyrosine recombinase XerC n=56 Tax=Vibrionales
           RepID=A8TB79_9VIBR
          Length = 243

 Score =  192 bits (488), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 11/225 (4%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
              L    V  YL  +P+F ++    V+ + VPH   GTVSLV   M R R  I  LEE 
Sbjct: 15  ANALTAEVVAQYLKDHPDFLVQRPELVDRLSVPHTDSGTVSLVHVQMNRQRQRIEDLEEE 74

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +  LM  A  N+  FY  + LQ  +   +    ++      A +LGL  A +RL      
Sbjct: 75  ITTLMSMAANNDRTFYEFMDLQGEVLKCNDFQQVINAIEVKAENLGLK-AYVRLLNQ--- 130

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL--PEAKAVGSVAMSML 189
                      LS+++++      L  +  YLG L   +   +    +   +GS  +  L
Sbjct: 131 -----CDAATPLSKENYQRFATNHLNGKPAYLGRLRKVDREALFEGMDVPEMGSYVVLPL 185

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
                LGV+ F+S D  H+Q    T  L  ++L++  L +  + +
Sbjct: 186 VKKQTLGVLAFSSEDGGHFQPDMDTLFLRHLSLVVAHLAQTLVWQ 230


>UniRef50_A9IH30 Putative uncharacterized protein n=5 Tax=Bordetella
           RepID=A9IH30_BORPD
          Length = 225

 Score =  192 bits (488), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 14/226 (6%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLE 69
           T T    + V D+L  NP+FF ++A     ++VPHP     +SL E  +   R     LE
Sbjct: 2   TDTAFTAQDVADFLQNNPDFFDQHAEVFATLQVPHPHGARAISLGERQILTLRERNRELE 61

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPD 128
             +  L   A +NE +  R+      L   +    +        A    L   +LRL+  
Sbjct: 62  WRLNELAHHADSNEAIGERVSQWCCRLLGEAEPQHLPGEIALGLAEQFDLNHVALRLWNL 121

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSM 188
             +  +      ++   ++F          +  Y GP    E    L       S+A+  
Sbjct: 122 PGQPPSG-YGEPVSADVRAFAD------SLKAPYCGPDTEFEAAGWLDAKP--RSLALVP 172

Query: 189 LG---SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           L        +G+++  S D   +    GT  L  I  +    L R 
Sbjct: 173 LRLDPDQPSVGLLVLGSDDPERFTPEMGTVFLEAIGRLASATLRRL 218


>UniRef50_B9ZNC2 Putative phytochrome sensor protein n=1 Tax=Thioalkalivibrio sp.
           K90mix RepID=B9ZNC2_9GAMM
          Length = 245

 Score =  191 bits (486), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 10/223 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +    V  YL  +P+FF  +   ++ +R+PHP  G VSL+E  +   R     +E++M  
Sbjct: 27  ISAGDVEAYLRDHPDFFQDHLPLLDILRLPHPAGGAVSLLERQVTLLREKHRAMEQHMGE 86

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLG 133
           L+E+A  NE +   L  L ++L  A +LD +L       R +LG    S+RL        
Sbjct: 87  LVERARDNERMGQHLHELAKTLMRAENLDAVLALTQDALRNELGAERVSIRLADREVDDL 146

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
                + L+               + +   G + G  L V+   A  +GS  +  LG ++
Sbjct: 147 HALESSELSTFDP--------LFARGKAQCGRVPGEMLDVLFDSADGIGSAILMPLGDES 198

Query: 194 -DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
             +GV+   S     +Q   GT  +  I  +L E +   +ER 
Sbjct: 199 DRIGVLGLASDSVDRFQPDMGTYFVTHIGDLLAESIRCHVERT 241


>UniRef50_D0I355 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP
           101886 RepID=D0I355_VIBHO
          Length = 224

 Score =  191 bits (486), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 75/232 (32%), Positives = 110/232 (47%), Gaps = 12/232 (5%)

Query: 3   QPGEELQETLTE-LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARA 61
               +L+  L E L D +V  +L  NP+FF R  R    +R+PH  RG VSLVE  + R 
Sbjct: 2   TELSKLKGPLAEVLTDESVAAFLTDNPDFFCRQPRLAVQLRIPHAERGAVSLVEIQLDRL 61

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGA 121
           R  +  LEE +  LM  A  NE LF       ++L AA S DD+       A  L L+  
Sbjct: 62  RERVAALEEEITQLMGIAAGNENLFRAFSLAHQALFAAESEDDIHQVLCTLAGALNLS-V 120

Query: 122 SLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAV 181
           SLRL+  R             L+R+S + ++      ++ YLG L   +    + +A  +
Sbjct: 121 SLRLYESR----------RHTLNRKSVDAVKAAHFCGQRIYLGRLRKVDGDQFVSQAPEL 170

Query: 182 GSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           GS A+  +  D +LG + F S D  H+Q    T  + +IA  +  LL +W E
Sbjct: 171 GSYALVPVVKDKELGFLSFASPDGGHFQPSMDTLFVEQIAEHIAILLTKWQE 222


>UniRef50_C5S7I3 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM
           180 RepID=C5S7I3_CHRVI
          Length = 230

 Score =  188 bits (479), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 13/233 (5%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M Q    L E L    +R VVDYL+ +P+F  R+   + AI VPH ++G VSL+E+ +  
Sbjct: 1   MHQAEHSLDEALDP--ERQVVDYLMAHPDFLARHPEVLSAIEVPHGIQGAVSLIEYQVRL 58

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLA 119
            R  +      +  L+ +A  NE L  RL  L   L      + +         R+    
Sbjct: 59  LRRQLATERNRLVHLIARARRNEALAIRLHGLILQLMVVKDPEHLCHLLRETLLREFHAE 118

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-A 178
             + +LF        P                    + +     GPL+    + +  E  
Sbjct: 119 ALAFKLFARATLESRP---------HDPVANAFADFIDRRNALCGPLSSERAVALFGEGG 169

Query: 179 KAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
             + S A+  + +D   G++   S DA+ +    GT  L+ +  ++ + L   
Sbjct: 170 TGIHSAAIVPIHADGQSGIIAIGSADATRFSPEMGTDFLNRLGEIISQKLRTV 222


>UniRef50_Q48AR7 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea
           34H RepID=Q48AR7_COLP3
          Length = 230

 Score =  188 bits (478), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 6/233 (2%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M    + +      L D  VV YL  NPEFF RN   +  +R+    RGTVSLVE    +
Sbjct: 1   MNDVQQAINSDDIPLTDELVVSYLQDNPEFFNRNNSLMTGLRLNDEQRGTVSLVERQQQQ 60

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
            R  ++ LE+ +  LM  A  NE LF     L   L    S +++L   H+   +L L+ 
Sbjct: 61  LRQKVYGLEDEITQLMSVANHNEQLFVLYSDLYLRLLDCQSAEELLDCLHQATTEL-LSL 119

Query: 121 ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           +S +L+      G  +   H +LS      +   RL  +++Y G L   E  ++  +   
Sbjct: 120 SSFKLWLVS---GNNTEVAHHSLSTNDCAGVMQNRLTNDEYYFGRLQESEQTLIFSK-PC 175

Query: 181 VGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           +GSV +  L   +  +G +   S DA H+     T LL++   ++ +LL + +
Sbjct: 176 LGSVVLIKLTHDEQAVGFLAIGSEDAHHFDPRMDTLLLNQFKRLVAKLLHQQL 228


>UniRef50_C7R6T1 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM
           16069 RepID=C7R6T1_KANKD
          Length = 225

 Score =  188 bits (478), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 7/215 (3%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLM 76
           ++ +  YL ++PEFF  +   ++ +R+ H V G+VSLVE  +   RN    L+  +  L+
Sbjct: 14  EQEIALYLEQHPEFFENHQDLLDKLRLQHKVYGSVSLVERQILGLRNKAEKLQTQLNTLI 73

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAP 135
           + A +N  L  +   L  ++ ++ S  +M+ R     RD   L    L LF D   L   
Sbjct: 74  DNAHSNGDLLNKCAELFVAMISSHSTQEMIDRLLEHLRDNFELDNVQLWLFDDSGTL-HH 132

Query: 136 SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADL 195
            N++ + + RQ  +    Q   Q     G +    +  +      + S ++  LG ++ +
Sbjct: 133 VNYSDIQMIRQLTD----QHFIQNDPICGRVTES-ISQLFGGDHELESYSIIPLGENSRV 187

Query: 196 GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           G++   S+D   +    GT  L  I  +    L++
Sbjct: 188 GIIALGSKDVDLFTADMGTLFLRLIGDVTEACLDK 222


>UniRef50_A1WWB4 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila
           SL1 RepID=A1WWB4_HALHL
          Length = 236

 Score =  188 bits (477), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 84/237 (35%), Gaps = 5/237 (2%)

Query: 1   MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR 60
           M +  +  +  L  LD+  V  YL ++P+   R+   +  + + H      SL+E  +  
Sbjct: 1   MTESAKRDEAPL--LDEAEVAAYLAEHPDLLHRHPELLARLELRHDCGDATSLIEHQVRV 58

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLA 119
            R     L   +  ++  A  NEG   RL  L   L AA  L   +       R+     
Sbjct: 59  LREESAGLRRRLDDMVRVARQNEGTAERLHELTLDLFAADDLQAAVEALRAGLREGFQAD 118

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFE-PLRIQRLGQEQHYLGPLNGPELLVVLPE- 177
              L L       G         L             L + +   G     ++  + P+ 
Sbjct: 119 AVGLLLIAPEAAGGETHAPIPEILDAGDPALTCFRPLLERGRPSCGTPTEAQVRTIFPDT 178

Query: 178 AKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
             AV S A+  +  +  +GV+   S D   Y  GQGT  L  +      +L+R + R
Sbjct: 179 ETAVASAALVPMIDERAVGVLGIGSSDPQRYHPGQGTVFLRRLGTTAARVLDRLLHR 235


>UniRef50_Q1ZLA2 Putative uncharacterized protein n=4 Tax=Photobacterium
           RepID=Q1ZLA2_PHOAS
          Length = 234

 Score =  187 bits (474), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 74/227 (32%), Positives = 107/227 (47%), Gaps = 12/227 (5%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNH 64
           G++L E    L+++AVV YL  NP FF R +  +  +R+PH  RGTVSLV+  + R R  
Sbjct: 12  GDDLNEV---LNEQAVVTYLRNNPTFFSRQSEWLSDVRIPHQERGTVSLVDIQLERLRLR 68

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLR 124
           I  LE+  A L+  A  +  L       Q  L    ++  +L      A  L L+   LR
Sbjct: 69  IAELEQQHATLLANATKSGELSVLFSNAQVQLLQCHNIYQVLTIIDALAAQLDLS-VCLR 127

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSV 184
           LF    +L        L L R+ F      RL Q++ YLG L  PE  ++      +GS 
Sbjct: 128 LFDSEDKL--------LYLERRQFNDFYRSRLTQDRPYLGRLRRPEAELLYTHPPQLGSF 179

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +  LG  A  GV+ F S D  H+Q    T  + ++A  +  L+E W
Sbjct: 180 IVLPLGRSAANGVLSFASADGGHFQPEMDTLFVEQLATTISYLIEHW 226


>UniRef50_A4B9F2 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297
           RepID=A4B9F2_9GAMM
          Length = 223

 Score =  185 bits (470), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 7/217 (3%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMA 73
           E+ +  VV YL ++P FF  +   ++ + + H     +SL+E      R     L + + 
Sbjct: 9   EITENDVVRYLKQHPGFFEDHPNLLKKLHLRHDSGEAISLIERQNQILRKENTDLIDRLN 68

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
             +  A  N+ LF  L  L   L A  SL+D+    +    +   +    + +       
Sbjct: 69  RFIHVAQRNDKLFLNLQTLVLKLLACRSLNDICKTLNTELTERFDVDQVQVVMCHRLTTD 128

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML-GS 191
           G    +      +  F         +     G        ++  +   + S+A+  L   
Sbjct: 129 GDMWLYCDTNTLQTHFPAAMRDARNE----CGEFTEQTRHLLFAD-TDIQSLAVGALTKD 183

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           D  +GV+   S+DA H++ G  T  L  +A+++ +LL
Sbjct: 184 DKGVGVIALGSKDAKHFRSGTDTLFLGHLAMVVSQLL 220


>UniRef50_Q0VM17 Putative uncharacterized protein n=2 Tax=Alcanivorax
           RepID=Q0VM17_ALCBS
          Length = 241

 Score =  184 bits (468), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 2/227 (0%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
              T      V  YL  + +FF      +E +R+P P    VSL+E   A  R     L 
Sbjct: 2   TDQTPASADQVATYLRDHADFFQHRPELLELLRLPDPKGEAVSLLERQAAILRERNTELR 61

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPD 128
           + +  L++ A  N+ LF +   L  +L  A   + +        + D      +L L+  
Sbjct: 62  DRLNGLLDVARENDHLFDKTRRLTLALLEARGPEKLFRNLLTSLSSDFHCDQVALMLYDR 121

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMS 187
              +     +    +   +        L   +   G +   E+  +  + A  + S AM 
Sbjct: 122 EVPILGDLRNQIRCVDSDALPSALNHLLRSGKAVCGAMRTEEMDALFQDNATDIRSAAMV 181

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            L     LG++   S+ A H++   GT  +  I  +L   L   + +
Sbjct: 182 PLEYQGRLGLLAIGSKSAMHFRSSLGTLFISHIGQVLSRRLHEVVRQ 228


>UniRef50_C6WT35 Putative uncharacterized protein n=1 Tax=Methylotenera mobilis JLW8
           RepID=C6WT35_METML
          Length = 230

 Score =  184 bits (467), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 80/230 (34%), Gaps = 13/230 (5%)

Query: 9   QETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHV 67
                 +    V DYL  +P FF +NA  +  I +P+P   G +SL E      R+ I V
Sbjct: 3   SNQHEAISAEDVKDYLRNHPSFFEKNATLLTEITLPNPHGSGVISLTERQQIAQRDKIRV 62

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLF 126
           +E  MA ++  A  N+    ++  L   L    S   +          D  +    +R++
Sbjct: 63  IEAMMAQMIVHAEENDATSAKVHKLSVKLLNQQSFSALQTLIAETLKLDFAVTEPLIRIW 122

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAM 186
                     +    A+     +      +   Q Y G        +V      + S  +
Sbjct: 123 VKPSNSAIIQD----AVFTHVSDAFNEWVMSLTQPYCGAKPEVMGDLV---DSKLQSFVI 175

Query: 187 SMLG----SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
             LG         GV++  S D   ++ G GT  L  I  ++   L   +
Sbjct: 176 IPLGKIAADQRPFGVLILGSSDKDRFKAGMGTMYLEHIGELVATALLNHL 225


>UniRef50_B8KSV2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium
           NOR51-B RepID=B8KSV2_9GAMM
          Length = 232

 Score =  182 bits (463), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 7/223 (3%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           +     T+LD  AV  +L+ NP FF+++   +  + +PH    TVSLVE  ++  R    
Sbjct: 9   KPSPVETDLDHAAVEAFLLDNPHFFMQHPGVLAELELPHGESSTVSLVERQVSLLRERNI 68

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRL 125
            +   +A + + A AN+ LF     L  +L     + ++   F             +L  
Sbjct: 69  EMRRRLAQINQWAKANDVLFAATRTLVLNLLEVRDVGEIKSTFDSGISNAFEAQFGAL-- 126

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
               W   A +    L         L +  +  +Q   G L   E+  +  EAK  GS  
Sbjct: 127 ---HWLPAAATLDPELNSLDTESSNLILSLVKHQQSLSGVLRAEEMTALFSEAKGEGSGV 183

Query: 186 MSMLGSD-ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
           ++ L  +   +GV+   S D + YQ   GT  +  +A ++  L
Sbjct: 184 VTPLRHNDEIIGVIAVGSHDTARYQSDDGTLFIDHLAEVIVRL 226


>UniRef50_Q2PYI2 Putative uncharacterized protein n=1 Tax=uncultured marine
           bacterium Ant4D3 RepID=Q2PYI2_9BACT
          Length = 237

 Score =  182 bits (463), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 83/222 (37%), Gaps = 3/222 (1%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
              L+  AV  YL +NP+FF + +  +  I + H      SL+E      R  I    + 
Sbjct: 13  DEPLNADAVASYLRQNPDFFNQRSSLLADIELAHDCGQATSLIERQTQVMRQKIKDNADR 72

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRW 130
           M+ ++  A  N+  F +   L  +L AA++L+D+       +  +       L +F    
Sbjct: 73  MSDILTTARRNDVQFEKTKRLVITLAAAANLNDLTEALKQSFIGEFHADAVHLAIFSGLN 132

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQ-HYLGPLNGPELLVVLPEAKAVGSVAMSML 189
                   +      ++     I+ L      Y        +  +      + S A+  L
Sbjct: 133 VTDTHPCLSSAEDPEENTYNAEIKALASNNWAYCQDFKVTSMSHLFVHHSKLKSSAIVPL 192

Query: 190 G-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
             +D  LGV++  S  A HY     T  L+ +A +    L R
Sbjct: 193 YLADQPLGVLIIASNCADHYSDQLDTLFLNHVAAVTGRCLGR 234


>UniRef50_A6F902 Uncharacterized conserved protein, YigA-like protein n=1
           Tax=Moritella sp. PE36 RepID=A6F902_9GAMM
          Length = 241

 Score =  182 bits (461), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 1/221 (0%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
             + ++ V+ +L  +P+FF+RN   V+ + + H  +G VSLV   + R R  I  LE  +
Sbjct: 14  PAISEQNVIAFLQADPDFFVRNNDLVDTLAISHGAQGCVSLVTLRLERQRQRIADLELQL 73

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRL 132
             L+  A  N+ LF     +  +L   +S+  M        +   L  A++ L  +    
Sbjct: 74  QQLVAIAADNDKLFRIYADIYTALFNCTSVMQMQRILVTQIQS-QLPLAAVNLHLNEAYF 132

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSD 192
              S +  LA+S      +R ++     HY GP+   +  ++  +   V S+A+  LG  
Sbjct: 133 HLKSQYLPLAISAGQLVRIRQKQFAGGDHYFGPVTSADKALLFGQDALVNSMALMALGER 192

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            + G++   S +A HYQ G    LL ++  ++  LL + + 
Sbjct: 193 GEYGLLAIGSANADHYQAGMDNLLLGQLCRIISTLLPQLMP 233


>UniRef50_A0Z3C5 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2080 RepID=A0Z3C5_9GAMM
          Length = 236

 Score =  180 bits (458), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 7/219 (3%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEE 70
           +   L+   V  +L+ +P+FF      +EA+ +PH   G++SLVE  +A  R     +  
Sbjct: 14  SPETLNADDVELFLMHHPDFFEGRKELLEALEIPHGGAGSISLVERQVAALRERNIAMRS 73

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDR 129
           ++A L   A  +E +      +  +L   S +  +         D  G+  AS       
Sbjct: 74  HLAELTHNAETSESILEATQQMILALLQCSEVSGLKPTIEAGLLDFFGVEYAS-----HV 128

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
           W   A              + +    L +++ Y G     E+L + P   + GS A++ L
Sbjct: 129 WLSAASEAFGEGVACETDRQDIIETLLRRQRAYCGVFRADEMLAMFPGCDSEGSAAIAPL 188

Query: 190 G-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
             ++  +G +   S D   Y    GT  L  +A ++  L
Sbjct: 189 HLNNVLIGAIGVGSSDVHRYDSSVGTLFLEHLADVIMHL 227


>UniRef50_Q65RL8 Putative uncharacterized protein n=5 Tax=Pasteurellaceae
           RepID=Q65RL8_MANSM
          Length = 237

 Score =  180 bits (457), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLM 76
           D  VV +L  NP+FF+++   ++ + +PH  +GT+SLVE  + R R  I  LE  +AL  
Sbjct: 11  DELVVKHLKANPQFFVQHIDLLDQLIIPHAQKGTLSLVEMQLERQRERIKELEAELALFA 70

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPS 136
           + A   + +F  L+ LQ+ L    +  + +   ++WAR+  L  A + LF D W+   PS
Sbjct: 71  DLAHQQQDIFLALMPLQKRLAQCKNFPEGVEEINKWARNFELQQAKILLFNDCWQ-KNPS 129

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSMLGSDADL 195
                 + R+ FE +R++R+G    YLG L   E  ++  PE   VGS+A  +LG   + 
Sbjct: 130 VGEEFWIDRKGFELIRLERIGLRHFYLGELTNKEKSLLFLPEELPVGSIACCLLGMKKNQ 189

Query: 196 ----GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
                ++LF++RD +H+  GQ T  L  +  ++   L RW+
Sbjct: 190 HKSTALLLFSARDTAHFHNGQDTAFLKHLVSIVELHLHRWL 230


>UniRef50_B4S2D8 Uncharacterized conserved protein, YigA-like protein n=3
           Tax=Alteromonadales RepID=B4S2D8_ALTMD
          Length = 231

 Score =  179 bits (455), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 13/223 (5%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEE 70
             + L    V  +L++NPEFF +    +E I++PH  +G+VSLVE    + R  +  L  
Sbjct: 19  DTSTLSSTDVHAFLLENPEFFAQYPDLLEKIKLPHEHKGSVSLVEIQSDQLRQKVRQLNF 78

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDR 129
            +  L+  A  NE ++     L   L    S+ ++        ++ L L+ A ++ F   
Sbjct: 79  KLNQLVTIAKQNEKIYRVYTDLNVQLLRCESVAEVQFTLEDVLQERLQLSSAVIKSFKGP 138

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
             +                     +R      + G L+  E  ++  E+ A  SVA+ +L
Sbjct: 139 HAIPELQQRL-----------FTEKRFKNTNFFFGRLSQHERQLLFGESPA-ESVALMLL 186

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           G + DLG++  +S DASH+     T LL ++  +L  +L   +
Sbjct: 187 GDNRDLGILGISSSDASHFTPDMDTLLLQQLQQVLNIILPEMM 229


>UniRef50_B2SMW7 Putative uncharacterized protein n=20 Tax=Xanthomonadaceae
           RepID=B2SMW7_XANOP
          Length = 226

 Score =  179 bits (454), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 78/227 (34%), Gaps = 7/227 (3%)

Query: 6   EELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHI 65
           E + E   +     V  +L ++P F  +      ++ VP     T SL  + +   R+  
Sbjct: 2   ERMSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKN 61

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDD-MLMRFHRWARDLGLAGASLR 124
             L   +  L   A  NE L  R   L  +L   +S  D +       A D       L 
Sbjct: 62  RELSRRLQELGSNAQENERLAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLV 121

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGS 183
           L      L A      +  +  +        L   +   G L   +  ++   +A  V S
Sbjct: 122 LLKPVDALDADW--LQIIATDDARLAPFSDCLSDGEPICGRLQADKHALLYGAQAGEVQS 179

Query: 184 VAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            A+  L     +G++   S DA+ +  G GT  L  +   L   L R
Sbjct: 180 TALLPL---PGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHR 223


>UniRef50_A3YDJ8 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121
           RepID=A3YDJ8_9GAMM
          Length = 223

 Score =  178 bits (452), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 14/228 (6%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHP--VRGTVSLVEWHMARARNHIHVLEENM 72
           + +  V+++L  NP+FF  +   +E + VPH      TVSL+E  +   R      +   
Sbjct: 1   MTEANVIEFLKANPKFFHEHLDLLEMMDVPHALEANNTVSLIERQVFLLRKSAEDYKSQF 60

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWR 131
             L+  A  NE + ++   L  +    +SLD+  +      R D  +   SL LF D   
Sbjct: 61  ERLVHVARENEAIMHKSRRLVLASMGCASLDEFAIMLDDAMRDDFNIKLHSLVLFSD--- 117

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSML- 189
              P +      +    EP+  + L +   Y G L+  E   +  + A  V S A+  L 
Sbjct: 118 --LPLDTNIRVTAMADAEPVLKEVLLKTGCYCGALSVAEAKYLFEDKADQVMSSAVLPLV 175

Query: 190 ----GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               G+D  +G++   S +   ++Q +G   L  ++ +L  +L R + 
Sbjct: 176 SHYQGADKYIGMLALGSDELEKFKQEKGVLFLEYLSDILSAILIRLLP 223


>UniRef50_A4SRX0 Putative uncharacterized protein n=2 Tax=Aeromonas
           RepID=A4SRX0_AERS4
          Length = 226

 Score =  176 bits (446), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           EL+     +D+  V++YL + PEFF R+A  ++ IR+PH  +G+VSLVE  M R R  I 
Sbjct: 3   ELKRQEPLVDEATVLEYLARYPEFFQRHAAMLDRIRIPHERKGSVSLVERQMDRQRERIE 62

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRL 125
            LE+ +  LM  A  NE +F     L   L    SL ++       + + L L G  L L
Sbjct: 63  QLEQEITELMGIASENERIFRVYADLYGELYGCQSLFEVSAVMGKAFVQRLRLTGLRLWL 122

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
            P +++L  P          +  E L  QRL  + +Y G LN  E   +      V SVA
Sbjct: 123 SPKKFQLSGPE--LRFMADGKQLEQLLGQRLPGQDYYFGRLNQSEKQALFGHDVLVNSVA 180

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGT 214
           +  LG    LGV+ F S D SH+     T
Sbjct: 181 LMRLGD---LGVLAFASSDPSHFSPHNDT 206


>UniRef50_Q31IM1 Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena
           XCL-2 RepID=Q31IM1_THICR
          Length = 223

 Score =  175 bits (444), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 85/226 (37%), Gaps = 6/226 (2%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHP-VRGTVSLVEWHMARARNHIH 66
           +   + ++    V +YL +N EFF      +  + +PHP     VSL+E  + + R    
Sbjct: 1   MSSLINDIHAEDVANYLNRNREFFHVFPNLLNELSIPHPKSGHEVSLLERQVFQLREQRD 60

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRL 125
            L+  +  L + A  N  L +++  L  +L AA S  + +   +    D   +   ++  
Sbjct: 61  SLQVEVDTLKDIAGENGALLHKVYDLSYALLAAESEQEAVNVVYDVMHDVFTVEEVTIIS 120

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
           +          N   ++   Q++     + L   +   G L       +    KA+ SV 
Sbjct: 121 WEVPKSSVHGVNQLGIS---QAWSQSLKETLQPGKPVCGLLEDSWQKGLFHTDKAMQSVC 177

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           +  LG     G +   +     +    GT  L  +  M+   L+R 
Sbjct: 178 VIPLGQQRVWGALALGAT-TDRFSPELGTYFLKVMGQMVTARLQRL 222


>UniRef50_Q5QUS7 Uncharacterized conserved protein, YigA-like n=2 Tax=Idiomarina
           RepID=Q5QUS7_IDILO
          Length = 231

 Score =  174 bits (442), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 7/205 (3%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           LDD  + +YL +NP+FF RN   +  ++  H  +G VSL+E    + R  +  LEE +  
Sbjct: 13  LDDSLIREYLQENPDFFTRNDDLLAQLQFQHSEKGAVSLIERQQQKLRLRVQQLEEEITE 72

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRLG 133
           LM  A  NE +F     L  SL    SL  +L      +  +L +   SL+ F     LG
Sbjct: 73  LMINARRNEAIFSAYSNLYVSLLRCQSLSQVLDELQNTFENELEMPALSLKFFDSPVDLG 132

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDA 193
                   + +  + + L  +R  +   YLG L   E  ++  + + + SVA+ +LG + 
Sbjct: 133 E-----QYSFASDTHKKLLSKRFNESSIYLGRLTEQEHKLLF-QDEEIASVALLLLGDNG 186

Query: 194 DLGVVLFTSRDASHYQQGQGTQLLH 218
           +LG++   + +ASH++      L++
Sbjct: 187 ELGMLAVGNTNASHFEPAMDKLLIN 211


>UniRef50_Q0ACL8 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii
           MLHE-1 RepID=Q0ACL8_ALHEH
          Length = 232

 Score =  174 bits (442), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 5/231 (2%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
           +      +L D  V  +L  +P+F +R+   +  + + H     VSL+E  +   R+   
Sbjct: 2   QQTNPEPQLTDEDVAAWLEADPQFLLRHPGVMRRLELRHDCAPAVSLIERQVQLLRHDNE 61

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRL 125
            L   +  L+  A  N+ +  RL  L   L  A +L  ++       R+       +L L
Sbjct: 62  RLRAELKDLLAVARYNDRIGARLHQLTLELMRADALGAVVEALRAGLREGFQADAVALLL 121

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSV 184
             +  + GA                     +   +   G +   +L  +    A  + S 
Sbjct: 122 LGEPEQAGALPV--PCLPEDDDRLACLNSFIMDRRPRCGRMQPEQLERLFGTSAARINSA 179

Query: 185 AMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           A+  L ++  + G++   S  A  + +GQGT  L ++  +  E L     R
Sbjct: 180 AIVPLIAERGVQGLLGIGSHLADRFHEGQGTVYLGQLGSLAGEALAAHRRR 230


>UniRef50_C5V603 Putative uncharacterized protein n=2 Tax=Gallionellaceae
           RepID=C5V603_9PROT
          Length = 208

 Score =  174 bits (442), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 20/223 (8%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           ++   V  YL+  PEFF  +   +  I + HP  G T+SL E  +   R    VLE+ M 
Sbjct: 1   MNSEDVAHYLLNTPEFFEDHLDTLAQITLAHPHGGRTISLGERQLLALREKNKVLEKQMY 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRL 132
            ++E A  NE L  ++     SL AA  L  +        RD   +   ++ L+      
Sbjct: 61  EMLEFARENEALQNKVHEFTVSLFAARDLTTLQEMIPHLLRDIFSVPHVAMHLWQVTPPS 120

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
                 T                  Q +         +      E A  + S A   L +
Sbjct: 121 MEVLMFTD----------------EQSKPVCLHQAAHDTASWFGESASLLHSFAYLPLHA 164

Query: 192 DA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            +  +G+++  S +   +    GT  L  IA      L  +++
Sbjct: 165 GSVSVGLLVLASEEKQRFYPEMGTVFLQRIADAAGSALHPYLD 207


>UniRef50_A1WRJ5 Putative uncharacterized protein n=19 Tax=cellular organisms
           RepID=A1WRJ5_VEREI
          Length = 243

 Score =  173 bits (440), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 87/240 (36%), Gaps = 13/240 (5%)

Query: 5   GEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARN 63
              L   +  + +  +  +L++ P FF R+A+ + ++++ +P     VSL E      R 
Sbjct: 3   APTLPPIVAPITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGARAVSLQERQAEMLRE 62

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGAS 122
            I  LE+ +  ++  +  N  + ++L     +L        +        R    +  A+
Sbjct: 63  KIKGLEQRIMEMVRNSTDNATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQAA 122

Query: 123 LRLFPDRWRLGAPSNHTH---LALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-- 177
           LRL+      G             S+ + +  R         + GP  G E  + L +  
Sbjct: 123 LRLWGLEGLEGLDGMGEPGIDARFSQGASDDARALASSLTMPFCGPNLGFEPALWLAQQA 182

Query: 178 AKAVGSVAMSMLGSDA------DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
                S+A+  L   A        G+++  S D   +    GT  L  IA +    L R 
Sbjct: 183 GDPAASLALLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALLRL 242


>UniRef50_C7HXH1 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12
           RepID=C7HXH1_THIIN
          Length = 223

 Score =  172 bits (436), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 13/228 (5%)

Query: 14  ELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENM 72
           EL +  +  YL  NPEFF R+A  +  +++  P     VSL E  M   R+ +  LE  +
Sbjct: 2   ELSEHDLAAYLAANPEFFERHAELLTTVQLQSPHGNRAVSLQERQMEMLRDKMRTLEHRL 61

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAAS--SLDDMLMRFHRWAR-DLGLAGASLRLFPDR 129
           A +M  A+ NE L  +LL   R +  A   + + +        +    L   +L+++P R
Sbjct: 62  AAMMRNAVDNETLAGKLLLWARDVMLAQQGAPEQLPQTLQDTLKSAFDLPMTALKIWPVR 121

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
               A    T ++   ++F             ++GP  G E    LP+A+   S+A+  L
Sbjct: 122 EAFAALDFATGVSEDAKTFAASLAA------PFVGPNPGFEAAHWLPDAQMAQSLALVPL 175

Query: 190 GSDAD---LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            +      +G+++  S D+  +    GT  L+ I+ +    L   + R
Sbjct: 176 QNPHTSMCMGLLVLASPDSQRFTADMGTDFLNHISQLASAALVGLLVR 223


>UniRef50_C0N8U6 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N8U6_9GAMM
          Length = 236

 Score =  171 bits (435), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 91/229 (39%), Gaps = 5/229 (2%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHV 67
           + +    L +  +  YL  +P+ F++  + +E + +     GT+SL +  + R +     
Sbjct: 1   MGDDKATLTNADIEQYLQDHPDLFLQQPQLLELLELNASPEGTISLAQRQLQRLQEKNQQ 60

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLF 126
           L E +  L++ A +N  L  R+  L   L  A  L  ++    +  + +      +LRLF
Sbjct: 61  LNEQLHALIDNAHSNNELQQRVHALCLRLLDAPDLKSVIDALVKELKHEFSADDVALRLF 120

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQ---RLGQEQHYLGPLNGPELLVVL-PEAKAVG 182
               +       +       + +         L ++Q   G L   +  ++   +A  + 
Sbjct: 121 YSADKPQELPKLSANVAQLHADDKKLRSFDNLLSKQQPVCGRLTKAQKQILFSGQADQIQ 180

Query: 183 SVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           SVA   LG +   G++   S DA+ +     T  L  +  +   +L ++
Sbjct: 181 SVACLPLGHEPCAGLLAIGSHDANRFHADMATDYLSFLGEVFMRILRQY 229


>UniRef50_Q088K7 Putative uncharacterized protein n=21 Tax=Shewanella
           RepID=Q088K7_SHEFN
          Length = 246

 Score =  171 bits (434), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 21/221 (9%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
              D+  + +YL+ NP+FF R    + A+RVPH  RG VSLVE      R  +  LEE +
Sbjct: 45  APFDEMLIREYLLDNPDFFNRYPELLVAMRVPHAERGAVSLVERRQELLRQRVSQLEEEI 104

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
             LM  A  NE +F     L   + A+  L ++ +        + G +   L        
Sbjct: 105 TSLMNIATHNEKIFKFNTELSFKMLASQDLGELRLVLSEGLKNEFGFSHVRL-------- 156

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLG-QEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
                    + +     E  +I R   Q  +Y G L   E   +      VGSVA++ L 
Sbjct: 157 ---------ITVHDIDSELAKIWRHRVQSGYYFGRLTQSESKRLFG--SEVGSVALTKLS 205

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +    +    S D +H+     + L  ++  +L  +L + 
Sbjct: 206 DENGQVIFAIASNDPTHFHPDMDSLLFSQLRRLLDHMLPKM 246


>UniRef50_A8TIN7 Site-specific tyrosine recombinase XerC n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TIN7_9PROT
          Length = 245

 Score =  171 bits (434), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 89/227 (39%), Gaps = 7/227 (3%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLE 69
            L EL    +VDYL  +P+F + +   ++ +  P    G  +      + R ++    L+
Sbjct: 19  DLKELTADRIVDYLKNHPDFLVEHPDLLQILTPPRREAGNVIDFQHAMVQRLKSENDKLQ 78

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPD 128
                L+  A +N+ +  R+     ++  A S + M+       A  L +   ++ +   
Sbjct: 79  TAQDYLVVTARSNQSIQSRVHDAVLAILRAPSFESMIHTVTSELAVQLDVDAVTIGVEAG 138

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSM 188
              +         AL   + + +  +        L      +  +    A  V S A++ 
Sbjct: 139 DVPIPKAYAAGIRALPEGAVDGILGR---GRDVVLTSNITGDPRLFGAAAGLVRSQALTR 195

Query: 189 LGS--DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           L +   A +G++   SR    +  GQGT+LL  +A  L  ++ +W+ 
Sbjct: 196 LRASTQAPVGLLALGSRRPDGFIAGQGTELLGFLARSLEIMIRQWLH 242


>UniRef50_A6W1A9 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W1A9_MARMS
          Length = 221

 Score =  170 bits (432), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 14/216 (6%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVLEENMA 73
           + +  V+ YL K P+FFIR+A  +E++ +PHPV G  VSL+E+ +   R           
Sbjct: 1   MSEEEVIQYLSKTPDFFIRHADLLESLTLPHPVNGKVVSLLEYQVNLLRKTTADYRAQFE 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRL 132
            L+E A  NE    +   L  +    S+LDD+ +      R D  ++  +L LF +    
Sbjct: 61  RLVEVARENESTMQKSRRLVLAGLTCSTLDDLAVIIDDMVRDDFEVSHHALVLFGE---- 116

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL-PEAKAVGSVAMSML-- 189
               +    +      +       G    + G L   E+  +   +A ++ SVA+  L  
Sbjct: 117 --FPDSAVRSHKLVEDDVFLSHAAGFTDCFCGMLPANEMSFLFLDDAPSIRSVAVLPLLS 174

Query: 190 ---GSDADLGVVLFTSRDASHYQQGQGTQLLHEIAL 222
              G     GV++  + + S +++ +G   L  +A 
Sbjct: 175 REGGEVRKCGVLVLGAENKSAFEKEKGALFLQYLAD 210


>UniRef50_Q1QSV0 Putative uncharacterized protein n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QSV0_CHRSD
          Length = 239

 Score =  165 bits (418), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 8/227 (3%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPV-RGTVSLVEWHMARARNHIHVL 68
           E  T LD   V  +L ++P+FF+     ++ ++VPHP  +G +SL+E  +   R      
Sbjct: 8   EPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDLRERAETA 67

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFP 127
           E  +  L+E A  NE  + R   L  +L  + S+D +         +       +L L P
Sbjct: 68  EWRLEHLLETARHNEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQAVALWLEP 127

Query: 128 DRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE---AKAVGSV 184
                   +                 + L         L       +LP        GS 
Sbjct: 128 G---TDGATLQPPRFALDTPTRAAFDELLDGHNSRCTRLPRDTWQHLLPHTTPPDQHGSC 184

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           A++ L     LG +L  S+++ H++    T     +  ++  LL R 
Sbjct: 185 AVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRL 231


>UniRef50_Q7NV17 Putative uncharacterized protein n=2 Tax=Chromobacterium group
           RepID=Q7NV17_CHRVO
          Length = 216

 Score =  164 bits (415), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 11/213 (5%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           +    V+ +L ++P+F  ++A        P      +S VE  M   ++    LE  +  
Sbjct: 1   MHSEQVLAFLDEHPDFLQQHAARYGLQAAPQNGERVISFVERQMLELKDQNRQLEAQLQQ 60

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWA-RDLGLAGASLRLFPDRWRLG 133
           L+++   N+ L  RL  L  +L AA     ++        R+  L  ++L+L+       
Sbjct: 61  LIDRGQDNDRLLARLHRLTLALLAARGPGKLIAELQGGLSREFQLDRSALKLWHPAAEKD 120

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS-- 191
           A   +            ++         Y GP    E+L   P    + S A   L    
Sbjct: 121 AEHYNAR--------SEVQGLARNLVAPYCGPYVNDEVLSWFPATPVLQSFAQVALKDAA 172

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALML 224
               G+++  S D   +     TQ L +I  ++
Sbjct: 173 GQPFGILVLASDDPQRFTFDMHTQYLAQIGELV 205


>UniRef50_A6GU47 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105
           RepID=A6GU47_9BURK
          Length = 216

 Score =  163 bits (413), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 83/225 (36%), Gaps = 22/225 (9%)

Query: 15  LDDR--AVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTV-SLVEWHMARARNHIHVLEEN 71
           + D    V D+L  +P+F I+N   +  I++P    G V SL E  +   R  +  LE  
Sbjct: 1   MTDEAIQVADFLKAHPDFLIKNPGILAFIKLPEQSTGNVASLHERQVQTMREKVKSLEHR 60

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRW 130
           +  +   A+ N+ +   L  + R+L    +  D+         +   +    L+L+ +  
Sbjct: 61  VVEMTHAAVENQAIIDNLQSITRTLLTVKNSADLPTVLVDAIKKKFVVPMVRLQLWSEDN 120

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLG-PLNGPELLVVLPEAKAVGSVAMSML 189
              + S+ T +               G +  Y G   N P L V   E  A  SV +  L
Sbjct: 121 SAASNSDKTLID--------------GMKSLYCGFSENAPTLSVFQGEEVAPRSVVLIPL 166

Query: 190 GSDA---DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              A     G + F S D   +     T  L+ +A      L R 
Sbjct: 167 RIGASPVTFGCLGFGSPDKDRFSPTLETDFLNTLAETACAALSRL 211


>UniRef50_B6IPE1 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IPE1_RHOCS
          Length = 236

 Score =  162 bits (411), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 86/226 (38%), Gaps = 9/226 (3%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVP--HPVRGTVSLVEWHMARARNHIHVLEE 70
            +L    V  YL ++P+F +++   +  +  P  H   G   +  + + R R  +  L +
Sbjct: 12  EDLTAEDVAAYLREHPDFLVQHPDLIGHLTPPALHRGDGVADMQFFMLQRLRGEVGRLSD 71

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDR 129
               L+    AN     R+      L  ASS + ++       A  L L  A+L +    
Sbjct: 72  QQRELIATTRANLNNQNRVHAAALFLLDASSFEHLIQTITTDLAVLLDLDVAALAVESQV 131

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML 189
             +G  +      L            LG+    L         +  P A  V S A+  L
Sbjct: 132 PEIGLAARTGLKLLEAGD----IGTILGRRDVLLRDNVVGAPEIYGPAAALVRSEALVRL 187

Query: 190 G--SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               D   G++ F SR+   +  GQGT+LL  +A ++   +  W++
Sbjct: 188 RLSGDGPQGLLAFGSREPDMFHPGQGTELLTFLARVMERCIRSWLD 233


>UniRef50_C1D8P9 DUF484 domain containing protein n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1D8P9_LARHH
          Length = 214

 Score =  161 bits (407), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 16/224 (7%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHP-VRGTVSLVEWHMARARNHIHVLEENMA 73
           +   A+  +L +NP+FF ++   +  +RVP P   GT+ L+E  +   ++    L   MA
Sbjct: 1   MTPEAIAVWLTRNPDFFEKHPDVLAELRVPAPRQEGTIPLIEKQVRVLKDKTRQLNAAMA 60

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLRLFPDRWRL 132
            LM    +N+ +      L   L  A+S++ ++         D  + G  L L+      
Sbjct: 61  QLMAYGESNDQIVAATHRLALHLMRATSVETVMAAVRASMDDDFAVTGWQLGLW------ 114

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMSMLGS 191
                H   A    S +PL +     E   +G    PE++  LP+ A A  S A++ L +
Sbjct: 115 -----HPQAAGHGLSRKPLPLSARALESPVVGHYLPPEMMAWLPQTADAWQSFALAALKN 169

Query: 192 --DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
                 G ++  S     +     T+LL +IA ++    ER + 
Sbjct: 170 PAGEAFGALILASESEHRFSPDMETRLLADIAELIAAAFERVLA 213


>UniRef50_UPI0000E105BC Uncharacterized conserved protein, YigA-like n=1
           Tax=Rhodobacterales bacterium HTCC2255
           RepID=UPI0000E105BC
          Length = 221

 Score =  161 bits (407), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 13/203 (6%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENM 72
             L  + V  YL  N EFF+        + +PH  RGTVSLVE    + R  +H   + +
Sbjct: 8   QTLSAKEVAQYLRDNEEFFVEYPELTAELIIPHQQRGTVSLVELQAEQLRKQLHSQRQEL 67

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWR 131
           A L+  A  NE LF     L + L    +L D+    H  +  +L LA   ++LF    R
Sbjct: 68  AALIRNADNNEQLFQIYAQLLQRLYTCDTLVDVEAALHACFHGELALAEVCVQLFIKETR 127

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
                +H            L  +R  Q   + G L+  E   +  E   V S A+ +LG+
Sbjct: 128 FADFKHHA-----------LIDKRFKQSDFFFGRLSQNETKQIFNEGS-VESCALMLLGA 175

Query: 192 DADLGVVLFTSRDASHYQQGQGT 214
               G +   S  A+H+Q    T
Sbjct: 176 KEPFGFLAVGSASATHFQPEMDT 198


>UniRef50_Q2VZB9 Uncharacterized protein conserved in bacteria n=3
           Tax=Magnetospirillum RepID=Q2VZB9_MAGSA
          Length = 239

 Score =  152 bits (384), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 84/223 (37%), Gaps = 8/223 (3%)

Query: 16  DDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHM---ARARNHIHVLEENM 72
           D+R V+ +L  +P+F +R+   + ++  P    G   +++  +    R R+ +  +    
Sbjct: 18  DERQVMAFLQAHPDFLVRHPDLLLSLSPPSRWGGEDGVLDMQVFMIDRLRDEVERVRGAA 77

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWR 131
             L+  + +N  +  R      S+  A ++ +++          L +  A+L        
Sbjct: 78  EHLIHTSRSNMSIQTRTHRAVLSILGADNMAELVEAVSDDLPALLDVDVATLCFEESDEV 137

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML-- 189
           L        L+L   +   +           L      +  +    A  V S A+  L  
Sbjct: 138 LPELRAPGILSLPVGTVAGIMGG--PDRDCALTEEMPGDPALFGDGAGLVQSSAVVRLSP 195

Query: 190 GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           G  +  G +   SR    +  GQ T+L+  +A ++   + R++
Sbjct: 196 GGKSPDGAMALGSRHGRTFHAGQATELITFLARVVEGSVRRFV 238


>UniRef50_C6NUR3 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus
           ATCC 51756 RepID=C6NUR3_9GAMM
          Length = 229

 Score =  148 bits (375), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 9/228 (3%)

Query: 8   LQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPH-PVRGTVSLVEWHMARARNHIH 66
           + ET  + D + V  +L K+PEF       +  I +PH  +    SL+E  +   R    
Sbjct: 1   MSETPRDDDAQQVRAFLRKHPEFLWTEEELLTEITLPHLGLGSASSLLERQVQALRQENL 60

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLF 126
           +L++ +A L+  A  N  L   L  L  +L  A     ++    R   +        ++ 
Sbjct: 61  LLQQRIAALLGAAQQNAVLARHLSDLAMALLRAQDCIAVVELTRRHLSE------VFQVE 114

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK--AVGSV 184
              W +         A++ ++     +  +       G    P+L   L EA    + S 
Sbjct: 115 QQAWLVAHSDFPVTGAVALEAERSRPLLAMAIAGARTGLELHPDLRRRLFEAPGAGLRSF 174

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
           A+  L      G ++  S+    Y    G+ LL +I  ++   L+R  
Sbjct: 175 AIIPLDGSCLSGGIVLGSQHPDRYGADAGSDLLEQIGRLVSAALDRCT 222


>UniRef50_C5JAZ1 Conserved uncharacterized protein n=1 Tax=uncultured bacterium
           RepID=C5JAZ1_9BACT
          Length = 237

 Score =  147 bits (372), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 14/234 (5%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
              LD   V  +L ++P FF  +   + +           S+    + + R       E 
Sbjct: 4   PPTLDPEHVYHWLREHPTFFQDHPDLLPSAI--TASGRVFSIEAGKLDQLRRQNEQTREQ 61

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRW 130
           +  +M++   NE +++    +Q +L  A  L +++        +   ++  ++ L     
Sbjct: 62  LEEMMQRIRHNEEIYHAFHRVQMALLNAGELAELVRAATAGLEETFAISRVTIALCDGPE 121

Query: 131 RLGAPSNHTHLALSRQSF---EPLRIQRLGQEQ---HYLGPLNGPELLVVLPEAKAVGSV 184
            LG         L  + F        Q LG        +G       L        + S 
Sbjct: 122 GLGLTRERRPFVLEDRLFLLDAASIAQALGSPPQPVIRVGQEGANRHLFFGSRGGEIRSE 181

Query: 185 AMSML-----GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           A+  L          LG +       + +     T L+ ++A ++   L + I 
Sbjct: 182 ALIPLVMRSGEEVRLLGSLNLGGTVPNRFLPHYSTDLVQDLADVITLCLRKMIP 235


>UniRef50_A4T0G4 Putative uncharacterized protein n=2 Tax=Polynucleobacter
           necessarius RepID=A4T0G4_POLSQ
          Length = 224

 Score =  146 bits (370), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 69/222 (31%), Gaps = 26/222 (11%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHPVR-GTVSLVEWHMARARNHIHVLEENMALL 75
           +  V ++L   P FF R A     IR+ HP     +SL E  M   R     L   ++ +
Sbjct: 12  EELVAEWLRVTPGFFERYADLFNEIRIKHPHEDRAISLQERQMTVLRTQNQELNRRLSEM 71

Query: 76  MEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGA 134
           +     N+     L+     L  A++  D+         +   +  A L           
Sbjct: 72  LHFGSRNDKTQQSLVAWLLRLMKANNKADVEAAITSGLSEVFEVESAQLL---SPNSAFG 128

Query: 135 PSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
           P   T L  S +      +  L  +                       S+    L     
Sbjct: 129 PWVDTPLCGSAKELAAASVDLLASQTTI---------------DPEWQSMVAIGLPLGKS 173

Query: 195 L------GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           L       V+L  S+D S +    G   L +IA +    L+R
Sbjct: 174 LDASQSPAVLLLASKDESRFTADMGAFYLRQIAELTAAALDR 215


>UniRef50_A7HT45 Putative uncharacterized protein n=1 Tax=Parvibaculum
           lavamentivorans DS-1 RepID=A7HT45_PARL1
          Length = 246

 Score =  145 bits (366), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 13/239 (5%)

Query: 3   QPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG--TVSLVEWHMAR 60
              + + +    L    V  YL +NP+    +   + A+  P    G   V + ++ + R
Sbjct: 8   TEAKRMDDIGAALAADEVKAYLRRNPDLLTDDPDLIAALVPPSQSTGRNVVDMQQFMIGR 67

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR---WARDLG 117
            +NH+ +L +  + L+E +  N     ++      L  A S + ++         AR LG
Sbjct: 68  LQNHVRMLRDIQSDLIEASSLNSLAREQVHAATLKLLDARSFEHLIEYTTSPDGLARVLG 127

Query: 118 LAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPL-RIQRLGQEQHYLGPLNGPELLVVLP 176
           +  A+L +       G       +         L   +R     H  G        +   
Sbjct: 128 IRAATLCIETANSVSGIGIRGVRVLEPGGVDRILGTGERCKLAPHVRGS-----RGLYGN 182

Query: 177 EAKAVGSVAMSMLGSD--ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            A  V S A+  L     +  G++     +   +   Q   LL  +A ++   + +W++
Sbjct: 183 MADDVHSEALVRLDFSPVSPPGLLALGGFEPDQFHPDQAVDLLEFLADVVERCVRQWLD 241


>UniRef50_Q3IDS1 Putative uncharacterized protein n=2 Tax=Alteromonadales
           RepID=Q3IDS1_PSEHT
          Length = 203

 Score =  143 bits (362), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 89/220 (40%), Gaps = 21/220 (9%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
           ++EL+ + VVDYL  +P+F I++   +  + +    +G  SLV     + R H  +L+  
Sbjct: 1   MSELNAQQVVDYLQHHPDFLIQHPELLAQLELQQQAQGATSLVHIQQRQLREHNTLLKNQ 60

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +A + + A  NE ++       + L + +  D +                          
Sbjct: 61  IASMNKYAAQNEQVYRLFSLCHQQLCSNNDFDALASNLQDII-----------------C 103

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
                +   L      +  L   RL    HYLG +N  E  ++   +    S A+ ++G 
Sbjct: 104 SNPDISDCRLVKYDTKYAQLVEHRLSNSGHYLGRINQQERDLLF--SDTAQSTAIYLIGD 161

Query: 192 -DADLGVVLFTSRDASHYQQGQGTQL-LHEIALMLPELLE 229
            +  + ++ F S +A+H++  Q T   L  +  +   LLE
Sbjct: 162 INKPIAILAFASNNANHFEPAQDTLFVLDFVVALQSRLLE 201


>UniRef50_B5ENS3 Putative uncharacterized protein n=2 Tax=Acidithiobacillus
           ferrooxidans RepID=B5ENS3_ACIF5
          Length = 227

 Score =  140 bits (354), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 77/227 (33%), Gaps = 8/227 (3%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRG-TVSLVEWHMARARNHIHVL 68
           E   E     V+ YL ++P+F       +  + +PH  RG   SL+E      R     L
Sbjct: 4   EPELETQADQVLAYLRQHPQFLWDQEDLLHTLTLPHVGRGSASSLLERQAQVLREENLRL 63

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFP 127
            + ++ L+  A  N  L   L  L   L         +       R+   +   +L    
Sbjct: 64  HQRISALLGAAQQNAALGLHLSDLATELLQTPDCTTTVNTVITRLREGFQVEEMALIARA 123

Query: 128 DRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA-VGSVAM 186
               L        L L +  F+ +              L+      +   A A + S A+
Sbjct: 124 PVAGLPQF-----LPLEQADFQEILNGLPLLRAATGLALSPTLRSTLFGAAGAGLASFAL 178

Query: 187 SMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
             L      G +L  S+    Y +  G  LL +IA ++   L+R + 
Sbjct: 179 IPLAGRHLQGGILLGSQHPDRYAEDAGADLLDQIARLVTAALDRCLA 225


>UniRef50_Q0AKV4 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10
           RepID=Q0AKV4_MARMM
          Length = 225

 Score =  140 bits (353), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 90/231 (38%), Gaps = 9/231 (3%)

Query: 7   ELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH 66
            + +   + D   + ++LI NP+F   +A     I       G + L      + R+ I 
Sbjct: 2   TMSDNTAQSDTDMIREFLISNPDFVREDAELFSLIVETDRDDGAIDLGAAARDKLRHEIR 61

Query: 67  VLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRL 125
            L+     ++E A AN     ++     +L  A SL  +  +  +R    LG+    + +
Sbjct: 62  QLKSLNESIVETARANLATQSQIHMAVLALLEAESLAGLDKKMSNRLTGALGVDVCRVLI 121

Query: 126 FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP-EAKAVGSV 184
                     +          +        LG     LGP++      +   +   V S 
Sbjct: 122 E-------GHAPVQAAESILGAASGFVGDVLGDHVELLGPVDPANAHALYGQQGARVSSQ 174

Query: 185 AMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
           A+  L  +   G++   +RDA  +Q GQGT+LL+ +A  +  ++ +W+ + 
Sbjct: 175 AIVRLDFNGQDGLMALAARDAHLFQSGQGTELLNFLARAVERMVVQWLHQT 225


>UniRef50_B9NJT9 Predicted protein (Fragment) n=2 Tax=cellular organisms
           RepID=B9NJT9_POPTR
          Length = 662

 Score =  139 bits (351), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 25  IKNPEFFIRNARAVEAIRV--PHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIAN 82
             +P+FF  +A  +  +++  PH  R  VSL E  M   R     LE  +A L+     N
Sbjct: 273 KSHPQFFEDHAELLATVQLTSPHSHR-AVSLQERQMEILREKNKGLELKLADLVRHGHEN 331

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTHL 141
           +    R+   Q  L A +    +        +    +    LRL+           + H+
Sbjct: 332 DRTQQRMHDWQMRLLAEADSHALPYAVRDGLQQVFDVPAVGLRLWSVGE------TYAHM 385

Query: 142 ALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190
            +++ + + LR+   G    + G   G E   +L E   V S+AM  L 
Sbjct: 386 EVAQGASDDLRLFAEGLRAPFCGANAGFEAAQLL-ERDDVASLAMVALR 433


>UniRef50_B4RB98 Putative uncharacterized protein n=4 Tax=Caulobacteraceae
           RepID=B4RB98_PHEZH
          Length = 227

 Score =  133 bits (336), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 77/229 (33%), Gaps = 21/229 (9%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVS-----LVEWHMARARNHI 65
           T   L    V  +L  NPEF   +   +  + +       V      L   H A  R   
Sbjct: 9   TAQALSPDEVRRFLSDNPEFLREDDGLLAELGLKVAAGNVVDFGPAALARVHAAHQRE-- 66

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLR 124
             + + +      A AN     +       L  + +  D+  R    AR   GLA   + 
Sbjct: 67  AEMRQLLEE---TARANFSAQAQTHGAVVDLLDSRNHSDLARRVDELARTRFGLAAGLIA 123

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSV 184
           L  +        +     +      P R+ R+G     LG        +       +GS+
Sbjct: 124 LEVEGAPPAGWRHLVDGQVDMILGGPQRLARMGFAPTALG--------LFGDVGPEIGSM 175

Query: 185 AMSMLG--SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           AM  +     +  G++ F S D   +    G++L+  +A ++    ERW
Sbjct: 176 AMVRMAIWEPSRTGLLAFGSADPEGFTPDMGSELVAFLARVVERTAERW 224


>UniRef50_A0L4T5 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1
           RepID=A0L4T5_MAGSM
          Length = 274

 Score =  133 bits (336), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 92/255 (36%), Gaps = 32/255 (12%)

Query: 8   LQETLTE-LDDRAVVDYLIKNPEFFIRNARAV-EAIRVPHPVRGTVSLVEWHMARARNHI 65
           +Q+ +TE L ++ V DYL+ NP FF  N   +  AI V       +SL    + + R   
Sbjct: 21  IQQAMTEPLSEKQVRDYLLDNPSFFNENGDLLPSAINV---SGRVLSLEAGQLNQLRQEN 77

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAA--SSLDDMLMRFHRWARD-LGLAGAS 122
             + E +  +ME+   N+ +++    +Q+ L       +  ++ RF +   D   +   +
Sbjct: 78  TRIREQVDHIMERIGQNDAIYHAFHTIQKGLLVEMGQDVATLINRFCQSLEDTFNIYRVA 137

Query: 123 LRLFPDRWRLGAPSNH------------THLALSRQSFEPLRIQRLGQEQHYLGPLNGPE 170
           L L      L    +               + +   +     I   G+    +G   G  
Sbjct: 138 LTLSDSAPALLPLRHAMQSNPALAGALMGRVHIMPHAELIKVIGHTGRSVIRVGREGGDR 197

Query: 171 LLVVLPEAKAVGSVAMSMLGS------------DADLGVVLFTSRDASHYQQGQGTQLLH 218
                 +A  + S A+  + +               +  +       + +  G  + LL 
Sbjct: 198 TPFFGMQAGQIKSDALIPIFNPPLDLLPIESPTPEPIASLNLGGESTNRFLPGYSSDLLQ 257

Query: 219 EIALMLPELLERWIE 233
           ++  +   +L+R +E
Sbjct: 258 DMTDIFVLILDRTLE 272


>UniRef50_B0T3E1 Putative uncharacterized protein n=1 Tax=Caulobacter sp. K31
           RepID=B0T3E1_CAUSK
          Length = 226

 Score =  131 bits (331), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 72/227 (31%), Gaps = 18/227 (7%)

Query: 11  TLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSL---VEWHMARARNHIHV 67
              ELD   V D+L   P F   +   +  + +       V         ++ A     +
Sbjct: 9   PRQELDAAFVRDFLRAEPGFLHEDPDLLSDLGLRPDASNVVDFGPAALARVSAAHEREAL 68

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLF 126
           +   +      A AN     +       L  A +  D+  R    A    GL    + L 
Sbjct: 69  VRRQIE---ATARANFSAQAQTHAAVIDLLDARNHSDLARRVDEMAILRFGLTAGVVVL- 124

Query: 127 PDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAM 186
               R+ A  +         +     + R+G     LG        +       + S+A+
Sbjct: 125 EGPGRVPAGWHALIEGQIDMTMGDHGVARMGFHAPALG--------LFGDRIDQIKSMAL 176

Query: 187 SM--LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
               L   +  G++ F S D   +    G+ L+  +A ++    ERW
Sbjct: 177 VRMALWEPSRQGLLAFGSADPEGFTADMGSDLVAFLARVVERTAERW 223


>UniRef50_D0L0D3 Putative uncharacterized protein n=1 Tax=Halothiobacillus
           neapolitanus c2 RepID=D0L0D3_HALNC
          Length = 240

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 67/234 (28%), Gaps = 39/234 (16%)

Query: 16  DDRAVVDYLIKNPEFFIRN----------------ARAVEAIRVPHPVRGTVSLVEWHMA 59
           D+ AV  +L +N  F   +                   +  I++P P  G  SL    + 
Sbjct: 19  DNTAVTLFLQQNHGFLAEHCQTNLRSVLEDLLASTPTLLTEIKLPSPPDGVASLPHIQLR 78

Query: 60  RARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAA--SSLDDMLMRFHRWARDLG 117
             R  +  L   +  L   A  N  L   L      L      + + +    H   +   
Sbjct: 79  ILRERLERLTHQINQLRFTAEDNARLDQVLHDFASDLLRTPQRTPEQLRTLLH---QHFT 135

Query: 118 LAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP- 176
           +    L    D    G               + +    L       G LN  +  ++   
Sbjct: 136 VDAVELLRMTDISAQG---------------QQILRGWLDSRTPLCGRLNEAQRELIFDT 180

Query: 177 EAKAVGSVAMSMLGSD--ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
                GS A+  +G++      ++         +   QGT  L +I  +    L
Sbjct: 181 HFPDTGSAALIAVGNNLAEPDWILALGRHAPDGFNPTQGTLFLRQIGDLAAAFL 234


>UniRef50_A4CFE2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata
           D2 RepID=A4CFE2_9GAMM
          Length = 203

 Score =  128 bits (322), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 85/222 (38%), Gaps = 20/222 (9%)

Query: 12  LTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEEN 71
           +++LD   + +YL  +P+F ++    ++A+ + H   G +SL      R +  +   ++ 
Sbjct: 1   MSQLDANEIAEYLALHPDFLVQFPELLDALNLYHNQPGAISLQSHQQKRLQQQLQQQQQQ 60

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +  L+  A  +E ++       R L    +  D+            L     +L      
Sbjct: 61  LNTLLAHARKSEQIYQVFSSCHRHLMLHDNFADLASNLVSLISA-NLDICECKLLKYEPY 119

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGS 191
           L                  +   RL  +  YLG +N  E  ++        SVA+ ++G 
Sbjct: 120 L----------------ASIVTHRLANQPRYLGRINQQEQALLFN--NECQSVALYLIGD 161

Query: 192 DA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
               L ++ F S+D  H++  Q +  ++E    L   L  W+
Sbjct: 162 AQTPLAILAFASKDPIHFEPSQDSFFINEFVKALHTKLSGWV 203


>UniRef50_A3UHS7 Tyrosine recombinase n=1 Tax=Oceanicaulis alexandrii HTCC2633
           RepID=A3UHS7_9RHOB
          Length = 221

 Score =  125 bits (315), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 9/226 (3%)

Query: 10  ETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLE 69
             L  LD  ++   L + PE    +   +   R        V L +    +    +  + 
Sbjct: 2   TALETLDMESLRAALRERPEIITGDPELMALARDADSGGSVVDLAQRRQKKLEKDLRKVR 61

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPD 128
                L+  A AN     +      ++  A  L  +  +     A  L +    + L   
Sbjct: 62  ATNDALIALAKANMAAQAQTHAAVLAILEAEDLAALDHKLASRVAGALSVDAVRVFLE-- 119

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE-AKAVGSVAMS 187
                  S     +        L    L  +   LG +NG     +       + S A++
Sbjct: 120 -----GHSPLKDASAILGCSPELTQALLDDDSERLGLVNGRFADALYGPLGPNLRSEAIA 174

Query: 188 MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            +      G++   SRDA  +   QG  L+H +A  L   +  W+ 
Sbjct: 175 RMEIGGHPGILCLASRDARAFTADQGADLIHFLARALERRIAPWLR 220


>UniRef50_C0N6Q6 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
           RepID=C0N6Q6_9GAMM
          Length = 358

 Score =  124 bits (312), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 9/177 (5%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGA 121
            +I  L+  +  L+  A +NE         + +L  + SL ++        ++   L   
Sbjct: 2   QNIATLQTRLDELLRIAKSNERKQDNFQQYELALLNSGSLHELFSIILDQHKERFQLTEV 61

Query: 122 SLRLFPDRWRLGAPSNHT------HLALSRQSFEPLRIQRL-GQEQHYLGPLNGPELLVV 174
           +L L+   + L                L          Q    Q++  L   +  +   +
Sbjct: 62  TLLLYDPEYELRRLVETKTGKHSWRNRLLFTETAQFISQYFSPQQKPRLVTFSSHQHTFL 121

Query: 175 LPEAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            P+   +GSVA+  L   +  +G +   SR+ S +Q   GTQ L  +A ++   +E 
Sbjct: 122 FPDHDQLGSVALLPLIRQNQLIGSLNLGSRNPSRFQSNIGTQFLSHLAAVVSACIEN 178


>UniRef50_Q0F1F2 Sensory box protein n=1 Tax=Mariprofundus ferrooxydans PV-1
           RepID=Q0F1F2_9PROT
          Length = 372

 Score =  119 bits (298), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 4/193 (2%)

Query: 46  PVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDM 105
           P        +    +  +    L+  +A +M++   NE LF RL  L+  +  A+  +D+
Sbjct: 6   PNDKVKDFSDRRFEKMADENRELKSYVAEVMQRLRQNEMLFSRLFELESQVLKAADPEDL 65

Query: 106 LMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHT-HLALSRQSFEPLRIQRLGQEQHYL 163
                R  R    L      L    +  G   +      L     + +      ++  +L
Sbjct: 66  CFTLLRGLRSGFDLDLVRFWLDRSSFMGGHKLDGLSDRDLVWVEKDEITGMGFSRKPVWL 125

Query: 164 GPLNGPELLVVLP-EAKAVGSVAMSMLGSDA-DLGVVLFTSRDASHYQQGQGTQLLHEIA 221
             L+  +  V L  +   +GS+A+  LG+     GV+   S D   +   Q +  L  +A
Sbjct: 126 IQLSSEKPFVWLQTQDSHLGSLALLTLGNPEHPFGVLGLGSVDRDRFAPDQSSDFLQHLA 185

Query: 222 LMLPELLERWIER 234
            ++   +E  + +
Sbjct: 186 QVIGLTMEHAVAQ 198


>UniRef50_A4G925 Putative uncharacterized protein n=2 Tax=Herminiimonas
           arsenicoxydans RepID=A4G925_HERAR
          Length = 362

 Score =  117 bits (293), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 8/178 (4%)

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM-RFHRWARDLGLAGAS 122
               L   + LL+EQA  N+ +  R          A++  +++   F        L   +
Sbjct: 8   ENSQLRSQLKLLLEQAHRNQQIMQRYQEFDLKFIGANTFQELIDSVFDTLTEASELDVVT 67

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQ-----SFEPLRIQRLGQEQHYLGPLNGPELLVVLPE 177
           L L      +        + +S         E +        +  LG  N  +   + P+
Sbjct: 68  LSLIDPDAEIRRILTDLRIDVSDYPNLIFIAESIDEMAHPARKASLGIYNSMQHRRLFPD 127

Query: 178 AKA-VGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
                 SVA+  L   +A +G +   S DA+ +  G  +  L   A ++   +E  I 
Sbjct: 128 TVLKPSSVAILPLIRRNALIGWLSLGSLDATRFTSGMASDFLQHRASIVAICVENVIN 185


>UniRef50_A1B4Z3 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans
           PD1222 RepID=A1B4Z3_PARDP
          Length = 236

 Score =  117 bits (293), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 10/235 (4%)

Query: 9   QETLTELDDRAVVDYLIKNPEFFIRNARAVEAI---RVPHPVRGTVSLVEWHMARARNHI 65
           QE   EL +  +   L+  PE  + +   + A+   R        + +    M    + +
Sbjct: 3   QEPAAELTEE-IRARLLARPELILSDRDLMRALIGAREAEVGENVIDIRGRAMQALESRL 61

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLR 124
             LE     ++  A  N+     +     SL      ++ L       A  L +    L 
Sbjct: 62  DRLEAAHESVISAAYDNQSGMNTIHRAVLSLLEPMDFEEFLENLDIAVAPILRVETLRLV 121

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLR--IQRLGQEQHYLGPLNGPELLVVLPEAK-AV 181
           +               +     +   L    +R+ +    +     PE L    EA+  +
Sbjct: 122 MESGGAIPEPEDGGPLVIAPAGTVAGLISGGRRMPRGDDIVLRRAVPETLPFHGEARAPI 181

Query: 182 GSVAMSM--LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            S A+    LG      ++L  S D   +   QGT LL         +L  W+ +
Sbjct: 182 RSEALLPIDLGPGRFPALLLMGSADIGRFNPAQGTDLLRFFGQAFRLVLISWLRK 236


>UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthinobacterium sp.
           Marseille RepID=A6T2S6_JANMA
          Length = 352

 Score =  116 bits (292), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 10/176 (5%)

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM-RFHRWARDLGLAGASLRLF 126
           +   + LL+EQA  N+ +  R          A+S  +++   F        L   +L L 
Sbjct: 1   MRTQLKLLLEQAHRNQQIMQRYQEFDLKFIGANSFQELIDSVFDTLTEASELDVITLSLI 60

Query: 127 PDRWRLGAPSNHTHLALSR-------QSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
                +    +   + +S        +  + +        +  LGP N  +   + P+  
Sbjct: 61  DPAAEIRRILSDLRIDISDYPNLLFVEDKDGVGEIAHPARKPALGPYNTMQHKRLFPDTV 120

Query: 180 A-VGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               SVA+  L   +  +G +   S D + +     +  L   A ++   +E  I 
Sbjct: 121 LKPASVAILPLIRRNTLIGWLSLGSLDPTRFTANMASDFLQHRASIVAICVENVIN 176


>UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1
           RepID=C6NZM9_9PROT
          Length = 379

 Score =  116 bits (292), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 6/176 (3%)

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMR-FHRWARDLGLAGAS 122
            I +L   M  LM++A  NE  + R    ++ L A  SL +++      +         +
Sbjct: 7   EIQLLRRQMQSLMDEARLNEKKWRRFEQFEKQLIATRSLPELIRVILEDYKTACETDAVT 66

Query: 123 LRLFPDRWRLGAP---SNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP-ELLVVLPEA 178
           L L      +      S      +              +   YLGP +   E  +  P  
Sbjct: 67  LVLCDPEREIRRILERSQQGSAEVPGLVLMEKLDAHHTKPAPYLGPFDAEMERAIFDPWP 126

Query: 179 KAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
               S+ +  L   D  +G +   S  A  +     T  +  +A +    LE  + 
Sbjct: 127 TGCQSMILLPLMRQDELIGSLNMASSTAERFTADSSTDFIERLANIFSICLENSLN 182


>UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
           RepID=B8GMH9_THISH
          Length = 370

 Score =  113 bits (283), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 60/179 (33%), Gaps = 7/179 (3%)

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLA 119
            +N    L   +  L+ +A  NE    R   L+  L AA+ L +++        R   L 
Sbjct: 5   LQNENRELRRQLRELLSEARENERKLDRFQALELRLVAATGLAEIISLLSSALPRASRLD 64

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK 179
              L L      +G       +       E     RL     YLGP              
Sbjct: 65  HMGLLLSDISGEIGLELAEAGIIPVPGQLELNPPVRLP-TGVYLGPYEPQRHGRYCAGRT 123

Query: 180 AVGSVAMSMLG-----SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
            +GS+AM  L          LG ++F SRD   Y  G  +  L  +A +    +E  + 
Sbjct: 124 DLGSIAMLPLRRSADMQSEPLGTLVFGSRDPGRYGLGVDSFFLERMAAITAVCIENALN 182


>UniRef50_B4WFE7 Putative uncharacterized protein n=2 Tax=Brevundimonas
           RepID=B4WFE7_9CAUL
          Length = 237

 Score =  112 bits (281), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 19  AVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQ 78
            V  +L  + +  + +   +E I +    R  V      + R    +         +   
Sbjct: 23  EVRGWLQTHAQTLLDDRSLLEEIGLRPHGRNVVEFGAAALTRLEAVVERETGARREVEMI 82

Query: 79  AIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWRLGAPSN 137
           A AN     +       L  A +  D+  R    A+   GLAGA++ +            
Sbjct: 83  ARANFAAQTQTHVAALDLMEARNHSDLARRLDAAAQGRFGLAGAAIAM-----EKPGGVP 137

Query: 138 HTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML------GS 191
               AL   + + L  +       +LGP+    L +       V SVA+  +      G 
Sbjct: 138 FGWRALETGAVDNLLGEH---GLTWLGPMFEG-LDLFGAAGDQVKSVALIRMAPHLTPGE 193

Query: 192 DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
                +  F S + + +    G +L   +A ++  + ERW
Sbjct: 194 PPRSCLCAFGSPEEAGFTPTMGCELAAFLARVVERMAERW 233


>UniRef50_C0DT94 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
           23834 RepID=C0DT94_EIKCO
          Length = 216

 Score =  111 bits (277), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 10/201 (4%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMAL 74
           ++++ ++ YL ++PEF + +A     + V        S  +      +     +   +A 
Sbjct: 1   MNEKKILAYLQEHPEFLLNHA---ADLGVRPAEGRVQSFAQAQWLAQQKKAAKMAGQLAQ 57

Query: 75  LMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR-WARDLGLAGASLRLFPDRWRLG 133
           +M+ A +N     R+L   R L AA++L  +L      W  D  L    + L  +  + G
Sbjct: 58  IMQDADSNHQTLGRMLGFVRRLLAANTLLQVLRAAEAGWQEDFALPSGRVWLLAEPPKKG 117

Query: 134 APSNHTHLALSRQSFEPLRIQRLGQEQHYLG-PLNGPELLVVLPEAKAVGSVAMSMLG-S 191
           A S    L                 ++   G  +    +  +  E + + S  +  L  +
Sbjct: 118 AVSGAYRLP----ENHAAHAALSALKEPLCGNRIAPALMKALPQEGRGLESFLLLPLRVN 173

Query: 192 DADLGVVLFTSRDASHYQQGQ 212
              + V++    D + +    
Sbjct: 174 GQTVAVMVAGDADETRFTPDL 194


>UniRef50_C5A928 Diguanylate cyclase n=1 Tax=Burkholderia glumae BGR1
           RepID=C5A928_BURGB
          Length = 373

 Score =  107 bits (268), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 12/179 (6%)

Query: 68  LEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLF 126
           +E +M  L++    NE +  R   ++  L +A+             A+   L   +L L 
Sbjct: 1   MERHMHALLDTVRHNERVLQRFQQIELRLVSATDFAVFHDTLVEALAQAFELPFVTLWLN 60

Query: 127 PDRWRLGAPSNHTHLA------LSRQSFEPLRIQRLG-QEQHYLGP---LNGPELLVVLP 176
            D   +    +    A      + R   + L     G   Q +LG    L    L V+  
Sbjct: 61  EDILLVREMLDAVSRAKPAAQAVLRGRLDALAGALPGEPGQPWLGAGAELGETALAVLYG 120

Query: 177 EAKAVGSVAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            ++   SVA+  L  +  + G +   SRD   +  G+ T LL   A  +   +     R
Sbjct: 121 GSEVPASVAVLPLHQEHGVNGYLCLGSRDPERFSVGKATDLLERFAAFVSAGVVNVAHR 179


>UniRef50_D2L4B3 Histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B
           RepID=D2L4B3_9DELT
          Length = 502

 Score =  107 bits (268), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 55/189 (29%), Gaps = 13/189 (6%)

Query: 59  ARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGL 118
            R R     L+  +  ++++   +   F +     R +    + +D+     R     GL
Sbjct: 62  ERTRKQAVDLQAKLKTVVDRFEGSFTAFEKFRKAIRVVEMMRAHEDLPAILERIKDLFGL 121

Query: 119 AGASLRLFPDRWRLGAPS--NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLP 176
              SL L    +    P           RQ+   L                 P+      
Sbjct: 122 RAVSLLLDAGEFAAFDPPGARLAEAKAMRQALSALMPGARLPGPFMCPISAVPDPEFFFG 181

Query: 177 EAK-------AVGSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLP 225
                      +GS  +S L         +G++ F   +   Y   +G++     A +L 
Sbjct: 182 PGFCAERKVLLLGSCFISPLRDKFGPQRLIGILSFFDSNPDRYTSEKGSEFASHFADILG 241

Query: 226 ELLERWIER 234
             +    +R
Sbjct: 242 YTIVDITDR 250


>UniRef50_B5JXR4 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015
           RepID=B5JXR4_9GAMM
          Length = 387

 Score =  106 bits (266), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 16/180 (8%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRW 130
           +A L+ +A  NE     L  ++  L  A S   +       + R   L   +L L     
Sbjct: 33  LATLLREARVNEEKLIHLQAMEVKLLNADSFYQVCDILIEDYRRQFNLRAVTLTLVDRGG 92

Query: 131 RLGAPSNH------------THLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEA 178
           +L    +                      +E ++  +       +GP+      ++    
Sbjct: 93  QLKEFLDENQPQEKADRERLEQHVFFVDDYEDIKGLQTLPRVPTIGPVEDAHRDLLGDYY 152

Query: 179 KAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER--WIERV 235
           +   S+A+  L   D  +G +   S D S Y Q   T  L  ++ ++   ++    +ERV
Sbjct: 153 EDAESLALLPLVRRDELIGFLTLASVDPSRYTQDMATDFLERLSSIVAVCVQNAIHLERV 212


>UniRef50_A0LL56 Diguanylate cyclase with GAF sensor n=1 Tax=Syntrophobacter
           fumaroxidans MPOB RepID=A0LL56_SYNFM
          Length = 379

 Score =  106 bits (264), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 12/190 (6%)

Query: 55  EWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR 114
           E  +A        L   +  ++  A  NE ++     ++R L     LD ++       +
Sbjct: 22  EALLAGLSEENEALRAQLEEVVATAATNERIWRHFAEIERILFRTRELDVLVEELLGELK 81

Query: 115 D-LGLAGASLRL---------FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLG 164
           +        L L         FPD      P +     +S      + +  +  +   L 
Sbjct: 82  ERFQTDQVILFLCHSDILERFFPDLSETREPVSAGTWIVSLPVEIGMALWNVSPKPFLLS 141

Query: 165 PLNGPELLVVLPE-AKAVGSVAMSMLG-SDADLGVVLFTSRDASHYQQGQGTQLLHEIAL 222
             N  ELL  LPE A  V S  M  L   +   G +   S DA  Y+   GT LL ++ +
Sbjct: 142 EENIEELLEYLPESASPVRSGVMIPLSIHEILFGGLFLGSMDADRYRPRDGTDLLEQLGI 201

Query: 223 MLPELLERWI 232
            +   ++  +
Sbjct: 202 KIALAMDNCL 211


>UniRef50_B2JML9 Diguanylate cyclase with GAF sensor n=6 Tax=Burkholderia
           RepID=B2JML9_BURP8
          Length = 418

 Score =  105 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 15/179 (8%)

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWA-RDLGLAGASLRLFP-- 127
            +  L++    NE    R   ++  L  A     +      +  R+ GL    L L    
Sbjct: 65  RLRALVDTVQRNERTLRRFQDVELHLIRAQDFQALCSVLFDYLPREFGLERVMLWLNDTL 124

Query: 128 ------DRWRLGAPSNHTHLALSRQSFE--PLRIQRLGQEQHYLGP---LNGPELLVVLP 176
                     +  P+  +       S E      +   Q + +LG    ++      +  
Sbjct: 125 PLLHEMASRHVTPPTAGSPAGSLNTSRETGDAATRLCAQGRPWLGACASMDDAARDALRA 184

Query: 177 EAKAVGSVAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
                 S+A+  L ++  L G +   S +AS +  G  T +L   A+++   L+    R
Sbjct: 185 GDMPAASIALLPLAANGLLSGYLCLGSDNASRFAAGMATDMLERFAVIVAASLDNVAHR 243


>UniRef50_C4XGG2 Sensor protein n=1 Tax=Desulfovibrio magneticus RS-1
           RepID=C4XGG2_DESMR
          Length = 503

 Score =  105 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 58/191 (30%), Gaps = 15/191 (7%)

Query: 58  MARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLG 117
           + R R     L+  +  ++++   +   F +     R +      +D+     R     G
Sbjct: 61  IERNRKQCVDLQAKLKTVVDRFEGSFTAFEKFRKAIRVVELMRGHEDLPAVLDRIKDLFG 120

Query: 118 LAGASLRLFPDRWRLGAPS--NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVV 174
           L   SL L    +    P           R     L  +       ++G +   P+    
Sbjct: 121 LRAVSLLLDAGEYAPFEPPGARLAEAGALRAKLAELMPKG-AGPGPFMGSIRAVPDPEFF 179

Query: 175 LPEAK-------AVGSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALM 223
             +          +GS  +  L         +G++ F   +   Y   +G++     A +
Sbjct: 180 FGQGFCAERKVLLLGSCFIYPLRDKFSPQKLVGILSFFDSNPDRYTSEKGSEFATHFADI 239

Query: 224 LPELLERWIER 234
           L   +    +R
Sbjct: 240 LGYTIVDVTDR 250


>UniRef50_Q2BHA0 Sensor histidine kinase n=1 Tax=Neptuniibacter caesariensis
           RepID=Q2BHA0_9GAMM
          Length = 376

 Score =  104 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 8/182 (4%)

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAA-SSLDDMLMRFHRWARDLGLA 119
                  L+  + ++ ++A  NE        ++  L +     D + +    +     L 
Sbjct: 6   LEQENQELKRTLRIMAKKAERNEATLNSFFEVELRLLSCSRLSDLLDLILIEFKEMFRLN 65

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSR-----QSFEPLRIQRLGQEQHYLGPLNGPELLVV 174
             +L LF       +  N                + L       ++  +G  + P     
Sbjct: 66  NVNLILFDPEHAARSLLNDYTPPAPGNTLRFVQSQRLLKSIYPNQKLIVGAPSQPLRNEA 125

Query: 175 LP-EAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            P  +  V S A+  L   +  +G +   S D S Y +      +  +A ++   +E  I
Sbjct: 126 FPVTSNPVESCALLPLIRQNCLIGSLHLGSSDPSRYTEHVRYDYIQHLASVVSVCIENCI 185

Query: 233 ER 234
            +
Sbjct: 186 NQ 187


>UniRef50_C4XU30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1
           RepID=C4XU30_DESMR
          Length = 410

 Score =  104 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 56/184 (30%), Gaps = 13/184 (7%)

Query: 61  ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG 120
            R  +  L   +  + E   AN+  F               + D+       +R +G+A 
Sbjct: 63  LRGQVRRLGARVVRMQEIFRANDQAFATFRSAMLLSRRLRRMADLPDMLAELSRTMGVAA 122

Query: 121 ASLRLFPDRWRLGAPSNHT-HLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEA 178
            +  L  +++    P       A +  +      +     + Y+GPL   P        A
Sbjct: 123 LTCLLSREQFAAYVPPGFPCPTAKALGAAVNALPRGTDPRRVYVGPLAALPRPDFFFDPA 182

Query: 179 KAV-------GSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
                     GS  ++ L         +GV+     D S Y   +GT  L     +L   
Sbjct: 183 ILADQPKLRDGSCFIAPLADKYQPKRRIGVLAMADVDPSRYTPSKGTDFLEHFCEVLAGD 242

Query: 228 LERW 231
           L   
Sbjct: 243 LLHV 246


>UniRef50_C5SIN7 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus
           CB 48 RepID=C5SIN7_9CAUL
          Length = 252

 Score =  104 bits (260), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 21/213 (9%)

Query: 28  PEF---FIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIH---VLEENMALLMEQAIA 81
           PEF     ++   ++ + +    R  +      ++R          +   +      A A
Sbjct: 48  PEFVQELKQDRELLDKLGLQPKTRNLIDFGPAALSRLEAKAIRDFDIRRQIE---ATARA 104

Query: 82  NEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTH 140
           N     +   +  SL  A +  D+  R +   R+  GL  A++ L  D   +        
Sbjct: 105 NFDAQGQAHAMALSLLEARNHSDLARRLNEEVRNRFGLVCATIAL-EDTAPIPLGWMTLD 163

Query: 141 LALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSM--LGSDADLGVV 198
                       +  LG +             +   E + + S A+    +  +   G V
Sbjct: 164 YGGVDYIIGETSLSLLGPDG-VC-------RALFGDEVRRIKSAAVIRTAMWREGRPGAV 215

Query: 199 LFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            F S D   +    G +L+  I  ++  + ERW
Sbjct: 216 AFGSADWEGFSPDMGAELVAFITRVVERVAERW 248


>UniRef50_Q0FEV9 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium
           HTCC2255 RepID=Q0FEV9_9RHOB
          Length = 241

 Score =  104 bits (259), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 70/234 (29%), Gaps = 19/234 (8%)

Query: 16  DDRAVVDY----LIKNPEFFIRNARAVEAIRVPHPVRG---TVSLVEWHMARARNHIHVL 68
           D   + D+    L   PE  + +   + A+            + L    + R    +  +
Sbjct: 3   DTTQISDFRKRILQD-PEALLNDREVMRALISASSSNAPTNVIDLKSVVLKRLEGRVEEI 61

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFP 127
           E   + ++  A  N     ++           +  + L      WA  L +  A L L  
Sbjct: 62  EGQNSNIISAAYKNISTTTKVHSAILDALEPKTFTEFLHFLKTDWASSLNIDVARLCLEA 121

Query: 128 D----RWRLGAPSNHTHLALSRQSFEPLRIQRLGQ----EQHYLGPLNGPELLVVLPEAK 179
                              +  Q  E      LGQ        L  +      +    A 
Sbjct: 122 PSINQEDIPQLEIEFGPSVVFLQEGEIDHYISLGQDSDPRPVTLRQIRKGASNIYNDIAP 181

Query: 180 AVGSVAMSML--GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            + S A+  L  G     G++L  S ++  +    GT L      +  ++++RW
Sbjct: 182 KLRSEALMKLDLGQGNSPGLLLLGSINSDQFLPNMGTDLFVFYGSIFEKIMQRW 235


>UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D6I3_LARHH
          Length = 350

 Score =  103 bits (258), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 8/170 (4%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWR 131
           +  L+E A+ NE L  R   L+ SL  A      L         +     +L +  D   
Sbjct: 5   LDSLLEHALRNENLHRRYQALELSLIGAPDFAGFLAVLRDELPAVLAPRETLLVVADPDG 64

Query: 132 LGAPSNHTH------LALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVA 185
             A            L L R +    ++   G     LG + G E+ + LP    V S A
Sbjct: 65  DIATILGLDETLPPGLVLLRDAGALEQVFPAGCRDPLLGRI-GHEVQIGLPWQGPVLSAA 123

Query: 186 MSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           +  L   ++ LG++     DA+HY+ GQGT  L   A ++   LE  + R
Sbjct: 124 VLPLVRQNSLLGLLAIGCHDAAHYEPGQGTDFLERFAAIVTLCLENVLNR 173


>UniRef50_A9GBK6 Site-specific tyrosine recombinase XerC n=40 Tax=Rhodobacterales
           RepID=A9GBK6_9RHOB
          Length = 235

 Score =  103 bits (257), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 65/227 (28%), Gaps = 11/227 (4%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIRVPHP---VRGTVSLVEWHMARARNHIHVLEENMA 73
           +  +   ++  P+  + +   + A+   +        V L    M R    +  LE+   
Sbjct: 8   EDNLRQAILAKPDALLEDQSVMNALVSANERAMGSNIVDLRGIAMERMEARLDRLEDTHR 67

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFP--DRW 130
            ++  A  N     ++      L      +  L        + L +   +L L       
Sbjct: 68  SVIAAAYENLAGTNQIHRAVLRLLDPMDFESYLGNLGGELAEILRVDSVTLVLETAHPEQ 127

Query: 131 RLGAPSNHTHLALSRQSFEPLRIQRL---GQEQHYLGPLNGPELLVVLPEAKAVGSVAMS 187
                     L +    F    I         Q  L  +          +A  + S A  
Sbjct: 128 DAAVQRMDQVLKVVEPGFVEQYINPQRNGPDRQVTLRQMQSGHARTHGAKADFIRSEACL 187

Query: 188 ML--GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWI 232
            L  G     G+++  S D   +    GT LL   A +    +  W+
Sbjct: 188 KLELGEGRLPGLLVLGSEDPHQFTPQHGTDLLAFFAGVFERSMRHWL 234


>UniRef50_C6BU23 Sensor protein n=1 Tax=Desulfovibrio salexigens DSM 2638
           RepID=C6BU23_DESAD
          Length = 485

 Score = 99.2 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 50/182 (27%), Gaps = 13/182 (7%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGAS 122
             I  LE  +        ++  LF +     + +    SL  +       A++LGL   +
Sbjct: 66  ERIKSLEGKLKEAYSVHNSDFQLFAKFGRALQYVNGLKSLSGLSDMLTGVAQELGLGRIA 125

Query: 123 LRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRL--GQEQHYLGPLNGPELLVVLPEAKA 180
           + L  DR                +         L  G  + +LGP++      V      
Sbjct: 126 VVL--DRELCKGMPCPEIPTFYLKGCMRYIDATLNNGPNRVFLGPISRMMRPDVFFGDPE 183

Query: 181 VG-----SVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           VG     S     +         +G+          +    GT  L      +   +   
Sbjct: 184 VGPEMGGSCFAFGMIDKYNPGKLIGLFSIHDPSEDRFHPEMGTDFLEYFCSSVASTIIDV 243

Query: 232 IE 233
           I 
Sbjct: 244 IN 245


>UniRef50_D2L091 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B
           RepID=D2L091_9DELT
          Length = 415

 Score = 98.4 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 14/176 (7%)

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDR 129
             M  L +   AN+  F               L D+     R AR +G+   +  L  + 
Sbjct: 73  GQMERLQDIFRANDQAFCTFRAALTLSRQLRHLSDLPDILDRLARAMGVPALACLLSRED 132

Query: 130 WRLGAPSNHTHLALSR--QSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEA-----KAV 181
           +    P+ +   + +    +   L      +   ++GP+    +     P A       +
Sbjct: 133 FEAYVPAAYPCPSQTALVAALRSLPRAPASERTVHVGPVAALADPGFFFPPALFAACPEL 192

Query: 182 --GSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
             GS  ++ L      D  +G +     D   Y   +GT  L     +L   L   
Sbjct: 193 SDGSCFIAPLHDKYRPDRRIGALALADPDPGRYTAEKGTDFLEHFCEVLAGDLLHV 248


>UniRef50_Q9LCV5 Atp operon (Fragment) n=4 Tax=Rhodospirillum rubrum
           RepID=Q9LCV5_RHORU
          Length = 886

 Score = 98.4 bits (244), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 60/195 (30%), Gaps = 10/195 (5%)

Query: 13  TELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGT----VSLVEWHMARARNHIHVL 68
            ELD+ +V+ YL+KNP+F + +   +     P          + +    + R +  +  L
Sbjct: 692 AELDEASVLGYLLKNPDFLMDHPEVLMMATPPRRFEKADDKVIDIQHVMLRRLQTEMADL 751

Query: 69  EENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFP 127
           ++    L+    +N       L    +L     L  ++          L +   +LRL  
Sbjct: 752 QDCAEQLIITTRSNMATQKGTLQAALALLDCEGLGPLVRTVAEDLPMLLDVDICALRLER 811

Query: 128 DRWRLGAPS--NHTHLALSRQSFEPLRIQRLGQ-EQHYLGPLNGPELLVVLPEAKAVGSV 184
                      ++                  G      L P    E  +    +  V S 
Sbjct: 812 HVLPPPGMPVEDNDDGLDLTTLPAGFVDDLFGPEAHAVLRPAVDAEDSIYGDISGIVRSD 871

Query: 185 AMSML--GSDADLGV 197
           A+  +  G     G+
Sbjct: 872 ALVRVEPGDGLPPGI 886


>UniRef50_A5V2S6 Uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1
           RepID=A5V2S6_SPHWW
          Length = 186

 Score = 93.0 bits (230), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 20/194 (10%)

Query: 48  RGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM 107
              +      MA  +  +  +EE    L+  A  + G    +     + T +  LD ++ 
Sbjct: 2   GSVIDFEGGAMASLKRRMAEVEEANQDLIAFARGHSGAVSSIHAAVLAATESDGLDHLIH 61

Query: 108 RFHR-WARDLGLAGASLRLFPDRWRLGAPSNHTHLALSR------QSFEPLRIQRLGQEQ 160
              + W   LGL   S+ LF     L A ++       R         E + ++ + +  
Sbjct: 62  IVTQVWPDMLGLDAVSVALFVGDQGLRADASGMQFVERRIIERSIVDIEGVVMRSVERGH 121

Query: 161 HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADL--GVVLFTSRDASHYQQGQGTQLLH 218
              G           P ++ + + A+  L ++A L  GV+    R    +    G++LL 
Sbjct: 122 PLFG-----------PASELIRAEALIRLSAEAPLPGGVLALGQRRPMGFDTRAGSELLG 170

Query: 219 EIALMLPELLERWI 232
            +  ML  ++ RW+
Sbjct: 171 FLGAMLSRMIGRWL 184


>UniRef50_C1SHV1 Diguanylate cyclase (GGDEF) domain-containing protein n=1
           Tax=Denitrovibrio acetiphilus DSM 12809
           RepID=C1SHV1_9BACT
          Length = 350

 Score = 92.6 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGA 121
                L+  ++ LME    NE        ++ +   A SL +++ +  R+  D  G+  A
Sbjct: 9   KENSDLKGELSGLMELVKENEAKHAGFKAVEFAFLLADSLKEVIEKPLRYLEDIFGVDRA 68

Query: 122 SLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV--LPEAK 179
            L +  D        N+    +     E +      +++ Y    +   L ++      +
Sbjct: 69  VLFINADELDFDREENNLGYRIYF-MPEGVFKTFFLEKRPY---NSDNALNLISEFNVYE 124

Query: 180 AVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +GS   + L  +D  +G +   SRD S +     T  + ++A +    +++ 
Sbjct: 125 DMGSYIFAPLVQNDKIIGSINLYSRDESKFGGEVATNFIKDLASIASVSMQKL 177


>UniRef50_C0GMT4 Sensor protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1
           RepID=C0GMT4_9DELT
          Length = 622

 Score = 88.4 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 11/183 (6%)

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGA 121
           R     L   +  ++     +   F R       + + ++L  +        ++L L G 
Sbjct: 37  RKSSRKLRSQVEEIVSTYQDSMAAFQRFRKCCSIVHSTTTLARLPGLLQSLKKELRLDGI 96

Query: 122 SLRLFPDRWRLGAPSNHTHLALS--RQSFEPLRIQRLGQEQHY----LGPLNGPELLVVL 175
            L L  + +    P + T +  S   +    L +        +    L      E L   
Sbjct: 97  HLVLASEEYDGLVPDSVTTMPQSGLHKLRAVLDLDHFSGCTIHSAEDLRASGLLEDLGFT 156

Query: 176 PEAKA-VGSVAMSMLGS----DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           P+     GS  +  L         +G+++F  RD++ Y +   T  +   A      +  
Sbjct: 157 PQGSLRTGSAIVFSLHDRFRSQRPVGLLMFYDRDSNRYTREVATDFVEHFAETFAWAMVS 216

Query: 231 WIE 233
             +
Sbjct: 217 LRD 219


>UniRef50_A6VU38 Diguanylate cyclase n=2 Tax=Marinomonas RepID=A6VU38_MARMS
          Length = 354

 Score = 86.1 bits (212), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 70  ENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPD 128
            ++  L++    NE +  +   ++R + +    D  +    +  +    +    + L  +
Sbjct: 2   HDINELIDNVRRNEEIARKFFEIERCILSIGRCDQFVSTLTKEVQKQFSVPYVWVNLINE 61

Query: 129 -------RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAV 181
                        P     +  +R+      I+   +       L+    ++       +
Sbjct: 62  APLSHLIESLEKMPDLRDRVLFTRRRSMIDIIKSSNKTVLVNTNLSQCREIIPSVYRDII 121

Query: 182 GSVAMSMLG-SDADLGVVLFTSRDASHYQQ-GQGTQLLHEIALMLPELLERWIER 234
            SVA+S L      +G+      D+S Y    + T LL ++A+ +   L     R
Sbjct: 122 SSVAISPLTIDGELVGLFCQADSDSSRYDATTKDTFLLDQLAIKISICLSNVTAR 176


>UniRef50_Q2SDE1 Response regulator containing a CheY-like receiver domain and a
           GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396
           RepID=Q2SDE1_HAHCH
          Length = 350

 Score = 80.3 bits (197), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 54/172 (31%), Gaps = 9/172 (5%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGA-SLRLFPDR 129
           +  L  +A  NE +   L  ++ ++   + +   L    +  +D  G+       +    
Sbjct: 4   LEELFARARKNEEIARNLFDIEVAMLNVAKVQPFLEHLLQTVQDKFGVKHVWYATVESAH 63

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPE--LLVVLPEAK----AVGS 183
                 +      L+ +      ++ L   +    PL                    + S
Sbjct: 64  TESLIKTLKASPELAGKWVSAPSVEYLAATKGAREPLVDHANLYRFFFMTPPEIRTQIRS 123

Query: 184 VAMSMLGSDADL-GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
           +A+  L  +  L G +   + D   Y+  +    L ++++     L   + R
Sbjct: 124 IAILPLILEGRLAGSLNLAADDQERYRADKECFFLRQLSVKASLCLSSVVAR 175


>UniRef50_C6MIN9 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212
           RepID=C6MIN9_9PROT
          Length = 180

 Score = 74.5 bits (182), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 50/171 (29%), Gaps = 16/171 (9%)

Query: 63  NHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRW-ARDLGLAGA 121
           +    L+  +   ++QA  NE            +  AS+   +             L   
Sbjct: 7   DKNRELQRKLDHFIKQARVNEKKQELYETFGFEIIGASTPKQLRDLLLSQSIVRFQLLDM 66

Query: 122 SL----------RLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLN---G 168
            L          RLF +            L +     +   IQ        LG       
Sbjct: 67  VLCLVDHHKDADRLFFEHDEEARLDCANKLLILDVINDAQIIQSF-IVNPMLGTEALKKY 125

Query: 169 PELLVVLPEAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLH 218
             ++  L  +  + S A   L  S+  +G ++  S+D   YQ+  GT    
Sbjct: 126 RWMINGLKSSDQIKSAAFLPLWRSNQVIGAMMLLSQDPHRYQKDIGTFFCK 176


>UniRef50_C6HWE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum
           RepID=C6HWE5_9BACT
          Length = 1586

 Score = 71.1 bits (173), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 19/183 (10%)

Query: 51  VSLVEWHMARARNHIHVLEENMALLMEQ-AIANEGLFYRLLYLQRSLTAASSLDDMLMRF 109
           V+L     +R           ++      A AN+ L     + + +L    S   +    
Sbjct: 434 VTLRHRQSSRL--------TRLSDFTAFFARANQLLSDAHTFEETALVLCESARQIPGLL 485

Query: 110 HRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP 169
             W  D+     +         +  P      +L +   E            +L   +GP
Sbjct: 486 LAWIGDINTPEVTTL------AVAGPPELLSDSLVQGVREETLKG--PGSPRFLSADDGP 537

Query: 170 ELLVVLPEAKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
           +   +LP   +VGS+A+  L    +  G +L    + + +      +LL E+A  + + L
Sbjct: 538 DETSLLPLPPSVGSLAVLPLSREGSPFGTLLLFHEEWNIFDTEI-RRLLGELARNISKTL 596

Query: 229 ERW 231
           +R 
Sbjct: 597 DRL 599


>UniRef50_A8ZV84 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfococcus
           oleovorans Hxd3 RepID=A8ZV84_DESOH
          Length = 347

 Score = 70.3 bits (171), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 10/168 (5%)

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLRLFPDRWR- 131
            L ++   NE    +   +++ + +     D+        +    L    L +  +    
Sbjct: 6   SLYQRLRENEETAKKFYEVEKKILSILRFKDLFDALLAEIKGQFNLPYVWLSIIENSEAH 65

Query: 132 -----LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA--VGSV 184
                +         +++             Q +  L          +LP  +   V S+
Sbjct: 66  HLIESIDDMDPELKASINIIDRSAFFALIGQQTEPILANDGLKPFFKLLPADRHYLVKSM 125

Query: 185 AMSM-LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           A++  +     +G +         ++ G  T LL ++A  +   L   
Sbjct: 126 AIAPIMMDGEIVGSLNQGDAAQDRFEPGMDTSLLEQLATKVSLCLSNV 173


>UniRef50_O31086 Orf235 (Fragment) n=11 Tax=Enterobacteriaceae RepID=O31086_SERMA
          Length = 63

 Score = 69.1 bits (168), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/55 (67%), Positives = 47/55 (85%)

Query: 180 AVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
            +GSVA+SMLG D +LG+V+F+SRD  HYQQG GT +L+++A MLPELLERWIER
Sbjct: 8   QIGSVALSMLGDDGELGMVIFSSRDTQHYQQGMGTVMLNQLARMLPELLERWIER 62


>UniRef50_C0Q9U5 Putative reponse regulator (CheY and GGDEF domain family protein)
           n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q9U5_DESAH
          Length = 342

 Score = 67.6 bits (164), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 55/168 (32%), Gaps = 9/168 (5%)

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLM-RFHRWARDLGLAGASLRLFPDRWR 131
             ++ +  ANE +  +  +++ S+    +  D       +  +   +    + +  +   
Sbjct: 5   DAILARLAANEQVAKKFHHIEISVLTILNFQDFFEQLLTKVGQTFQIPHVWISIIQESAI 64

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQ-----EQHYLGPLNGPELLVVLPEAKA--VGSV 184
                     A+ + S   +      +      Q  L   N      ++P      +GS+
Sbjct: 65  ADQILAMEDSAVLKSSTSFITHSTFLRLIGSYRQPLLANQNLDRFSPLVPPEAHYDIGSI 124

Query: 185 AMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
           A++ L      +G +    +    +  G  T LL  ++L +   L   
Sbjct: 125 AIAPLFIDGELIGSLNQADQVCDRFMPGIDTDLLARLSLKISLCLSNV 172


>UniRef50_Q1JWC9 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684
           RepID=Q1JWC9_DESAC
          Length = 353

 Score = 66.4 bits (161), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 9/170 (5%)

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWR 131
             L E+   NE L  +   ++  + +     D      +   D   +      L  D   
Sbjct: 5   KSLFERVRENEQLAEKFYKVELKILSTLKFADFFDTLLKEISDVFQVPFVWFSLIADTEV 64

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQ--EQHYLGPLNGPELLVVLP-----EAKAVGSV 184
                        RQ    +   +L +         L   +L   LP     +  AV S+
Sbjct: 65  AAMLQQCRGECSERQRINLIDRHQLQRLIGDDLSVQLVNDQLHRYLPLLPKDQHYAVRSI 124

Query: 185 AMSMLGSDA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIE 233
           A++ +  D   +G +     D   +  G  T LL  +AL +   L     
Sbjct: 125 AVAPITLDGIVIGTLNQADVDGQRFAPGLNTVLLERLALKVAICLSNVTA 174


>UniRef50_C7LSE4 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LSE4_DESBD
          Length = 434

 Score = 66.1 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 17/186 (9%)

Query: 64  HIHVLEENM-------ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL 116
               L+  +         ++    A    F         +     L+++        R  
Sbjct: 59  ENAGLKRRLRASKISFDSMISAYKAILDAFETFRGTVDLVQQTKRLEELPATLDAIRRLR 118

Query: 117 GLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQH--YLGPLNGPELLVV 174
            L    + L  D +    P      + +    E L+           +LG +   E    
Sbjct: 119 TLHTLHVVLDHDLFEQRIPKGVGRASAAM-IRERLKQFSPSPHAPRLFLGEVRHIEKPGF 177

Query: 175 L---PEAKAVGSVAMSMLGSD----ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
                E    GS  +  LG        +GVV     +   Y   + T  L     +L   
Sbjct: 178 FLGLDEDPPSGSCFIFALGHKYVHSKIIGVVAAYDPNPRRYAPDKATDFLSHFCDILACT 237

Query: 228 LERWIE 233
           L   +E
Sbjct: 238 LITALE 243


>UniRef50_Q0BQE3 Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis
           CGDNIH1 RepID=Q0BQE3_GRABC
          Length = 225

 Score = 62.2 bits (150), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 8/220 (3%)

Query: 15  LDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWH--MARARNHIHVLEENM 72
           +D   +  +L  +P++         ++  P  V G          +   R    V     
Sbjct: 1   MDSDCIDAFLRAHPDWLAGRPDLYASLSPPRRVHGDTLADHMQARIDAERVRCEVACNAA 60

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRL 132
             +++ + A+  L  R+     +L  AS    M          LG+     RL+      
Sbjct: 61  RDILQASRASACLTTRIQRSVLALLRASD--AMDCILQELPSLLGIEYT--RLYYPTSPA 116

Query: 133 GAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSML--G 190
                    A             LG +   +  L  P+L +    A  +   A+ +L   
Sbjct: 117 LLTPMVCERAGVEPMARTAMSALLGDKDVQIRSLTIPDLTLHRETAPLIRQDALLLLPRT 176

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           S     +++  +R+          Q L  +A      L+R
Sbjct: 177 SSPSPWLMVLAARNREELAAPNARQALRFLAEATSSALDR 216


>UniRef50_B8HKT0 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HKT0_CYAP4
          Length = 701

 Score = 51.8 bits (123), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 59/188 (31%), Gaps = 22/188 (11%)

Query: 59  ARARNHIHVLEENMALL-MEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL- 116
           AR R  +  LE          A  N  +   L    R L +      ++       + L 
Sbjct: 130 ARLRQQLQRLESEHQQTEAAMAEQNAHI-RLLYETTRDLLSTEQPLALVGSLFTKLQSLM 188

Query: 117 GLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV-- 174
           G+      L  ++ +    + +  ++ +        I+ L   +   G +      +V  
Sbjct: 189 GMEVYFNYLIDEQQQKLRLTFYGGISDTLAE----EIKWLEIGRAICGTVAQQRCQIVQP 244

Query: 175 ------LPEAKAVGSVAMSM------LGSDADLGVVLFTSRDASHYQQGQGTQLLHEIAL 222
                  P+A  V S+ ++       +      G + F S   +H+       LL  +  
Sbjct: 245 DLQHSTNPQADLVRSLGLTAYSCQPLIAQGKLFGTLGFGSYHRTHFSPA-EVNLLQVLCD 303

Query: 223 MLPELLER 230
            +   LER
Sbjct: 304 QIAVALER 311


>UniRef50_B7RSS4 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148
           RepID=B7RSS4_9GAMM
          Length = 380

 Score = 49.9 bits (118), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFH-RWARDLGLAGASLR 124
            +LE  +A  +     N  L+ +   L+R L  A  L  +L        R      A L 
Sbjct: 26  ELLELRLAERISV---NRYLYQQTQQLERMLLDAKDLQCLLEVLLVSLPRHFSFRAAELW 82

Query: 125 LFPDRWRLGAPS----NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA 180
           L+     L         + H    +Q    ++     +    +  +    +  VL     
Sbjct: 83  LYDPEDVLAGLIVGGERYGHYLQLQQDAFEIQELYSLEPGIEIIDVTDSRMFEVLKSEHG 142

Query: 181 VGSVAMSMLGS-DADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
           +  V +  L      +G +    ++ S       + LL  +A+M+   
Sbjct: 143 IDYVLLLPLIESGRLIGSLHLGLQEDSLAFGNAESDLLSHLAMMISRC 190


>UniRef50_Q5UW88 Sensor protein n=2 Tax=cellular organisms RepID=Q5UW88_HALMA
          Length = 1971

 Score = 48.3 bits (114), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 56/186 (30%), Gaps = 27/186 (14%)

Query: 54   VEWHMARARNHI--HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMR-FH 110
            VE  +   R  +    +E  +  L E A                L +AS   ++      
Sbjct: 1559 VELLVQWVRYELAGEAVETKLRELNETAQR--------------LLSASDASEVASTAIE 1604

Query: 111  RWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLR--IQRLGQEQHYLGPLNG 168
               R LGL    +  + +      P+  T  A +    +P       L  E    G +  
Sbjct: 1605 SAKRVLGLPMTGIWWYDEGKDALVPAGLTDEAGALLGTQPTFDGEGSLAWETFESGEVRV 1664

Query: 169  ----PELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALML 224
                 E+     +   + S  +  LG     G+++  S +   +       L   +A  +
Sbjct: 1665 YDDLQEVEARFNDDTPIRSETLVPLGDK---GILISGSTEQRAF-SETDRGLFEILAATV 1720

Query: 225  PELLER 230
               L R
Sbjct: 1721 ETALSR 1726


>UniRef50_B8G7Y2 Protein serine phosphatase with GAF(S) sensor(S) n=3
           Tax=Chloroflexus RepID=B8G7Y2_CHLAD
          Length = 1332

 Score = 48.0 bits (113), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 22/189 (11%)

Query: 54  VEWHMARARNHIHVLEE--NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR 111
           V   + R R  I  L+    +  L+  +   + +F  +  +   LT A         F+ 
Sbjct: 543 VTLQVQRTR-QIAELQAINQIGTLVAASYDLDRIFNEVRRIVVDLTEA-------SVFYL 594

Query: 112 WARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPEL 171
              D         +F +                R   + L  QR       L  +    +
Sbjct: 595 LLCDPDTRVVQYAVFVEHHHQLGAELMGRPIHPRSLTDWLLTQRRSLRFDDL-SVERDRV 653

Query: 172 LVVLPEAKAVGSVAMSM-------LGSDA-DLGVVLFTSRDASHYQQGQGT-QLLHEIAL 222
             +  +   +GS  +         L  +   +GV+         Y    GT   L +IA 
Sbjct: 654 EALGIQPYPIGSSHLMRSWVGVPLLAQNEVAIGVLALQDERPYRY--DDGTVDFLAQIAS 711

Query: 223 MLPELLERW 231
           +L   +++ 
Sbjct: 712 LLSLAVQKV 720



 Score = 41.8 bits (97), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 50/203 (24%), Gaps = 33/203 (16%)

Query: 45  HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDD 104
            P R  +  +E      R      +  +  L                       A     
Sbjct: 5   DPGRQLIDELERQRDLLRRQQERDQRILTTLYAIG-----------------LVARDHPS 47

Query: 105 MLMRFHRWARD----LGLAGASLRLFP---DRWRLGAPSNHTHLALSRQSFEPLRIQRLG 157
           +   F     +           L L     +R+R     +   +              + 
Sbjct: 48  LRAMFETIVHELHNVFEFDACYLALCDEQPERFRAALLYDEGVIEFLENREYGYLTGLIV 107

Query: 158 QEQ--HYLGPLNGPELLVV----LPEAKAV-GSVAMSMLG-SDADLGVVLFTSRDASHYQ 209
           + +     G L       +          +  S     L  S+A +GV+   S +   Y 
Sbjct: 108 RRREPILFGDLVVERDTTLPTVPFGNVTKLSRSWVGVPLMISEAAIGVISLQSYEPYRYN 167

Query: 210 QGQGTQLLHEIALMLPELLERWI 232
           Q     LL  +A ++   LE  +
Sbjct: 168 QET-VDLLQRVANVIALALENVV 189


>UniRef50_Q8TRB0 Sensor protein n=2 Tax=Methanosarcina RepID=Q8TRB0_METAC
          Length = 1456

 Score = 47.6 bits (112), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 29/198 (14%)

Query: 54  VEWHMARARNHIHVLEENMALLMEQAIANEGL------FYRLLYLQRSLTAASSLDDMLM 107
           +       +     L      LM+    NE L      F  L      L ++   +  ++
Sbjct: 341 LHAQAEELQAQNEELHAQAEELMKT---NEALIESKKRFELLSEANAFLLSSKEPETTIL 397

Query: 108 RF-HRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLG-- 164
                  R L         F   +       H +      +     I+ L +     G  
Sbjct: 398 TIAENVMRYLKCD----VFFNYVFDRENGKLHLNACGGISAEAAKEIEWLDKGVAICGCV 453

Query: 165 -----PLNGPELLV-VLPEAKAVGSV-----AMSMLGSDA-DLGVVLFTSRDASHYQQGQ 212
                 +   ++       A  V S+     A   L      +G + F ++    +++ +
Sbjct: 454 ARDGCRIVAEDVQYNWDKRADLVRSMGIQAYACHPLHVGETTIGTLSFGTKSRKDFKEDE 513

Query: 213 GTQLLHEIALMLPELLER 230
              +   +A  +   +ER
Sbjct: 514 LALM-KTVADQVSVAIER 530


>UniRef50_C1V4I2 PAS domain S-box n=1 Tax=Halogeometricum borinquense DSM 11551
           RepID=C1V4I2_9EURY
          Length = 839

 Score = 47.6 bits (112), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 55/210 (26%), Gaps = 29/210 (13%)

Query: 35  ARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQR 94
           A  +            +  V+   ++ R     L+     L+     NE +      + +
Sbjct: 404 ADLLAT-----TAEAALDRVKRQ-SQLREQDRELQRRNERLVSLNRVNEII----REVDQ 453

Query: 95  SLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRI 153
           SL  A + + +      R   +     A +       +   P   +     R   +   +
Sbjct: 454 SLIRAETREAVERAVCERLTAEDRYEFAWVGSIDPTSQTLVPRAASGTG--RGYLDDRSL 511

Query: 154 QRLGQEQHYLGPLNGPELLVVLPEAKAV--------------GSVAMSMLGSDA-DLGVV 198
               + +         E  +V   A  +               SV    L  D    GV+
Sbjct: 512 ALDPEGEPACSTAATDEETLVSNVATDLQQQPWRRAALERDFQSVVAVPLSYDGVAYGVL 571

Query: 199 LFTSRDASHYQQGQGTQLLHEIALMLPELL 228
              +   + +     T +   +   +   +
Sbjct: 572 TVYADRPAAFDGMVRTVMAE-LGETVASAI 600



 Score = 39.9 bits (92), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 14/155 (9%)

Query: 89  LLYLQRSLTAASSLDDMLMRFHRWARD---------LGLAGASLRLFPDRWRLGAPSNHT 139
           L      L  A ++ ++  R    A +               + RL P          + 
Sbjct: 272 LHRTTSELQYAETVQEIAHRVVDDADEILGCAASAVFRFDAETNRLEPVAHTPAMDRLYG 331

Query: 140 HLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVL 199
            L   R S   L  +     +      +  E   +   A  + SV +  LG     GV++
Sbjct: 332 PLPSFRPSEGNLIGRAFVTGEPLF-FDDVHESPALSNPATDLRSVVVLSLGDH---GVLV 387

Query: 200 FTSRDASHYQQGQGTQLLHEIALMLPELLERWIER 234
                   +     +++   +A      L+R   +
Sbjct: 388 AGVDTVGAFD-EVHSEIADLLATTAEAALDRVKRQ 421


>UniRef50_A4J4M7 Sensor protein n=1 Tax=Desulfotomaculum reducens MI-1
           RepID=A4J4M7_DESRM
          Length = 560

 Score = 46.8 bits (110), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 66/211 (31%), Gaps = 29/211 (13%)

Query: 31  FIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLL 90
           F +N   +  +       G  S       R  NH   L + +  +      N+ L   + 
Sbjct: 4   FEKNEELLNKLI------GVRS------TRL-NHYVELRKTIEEMT---KQNKRL-EIIN 46

Query: 91  YLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRW-----RLGAPSNHTHLALS 144
            + RS+T A S D+++ R     ++ +     S  L           +        +   
Sbjct: 47  EIARSITVAMSYDEIIERTAEPLKEVIPYDLLSFCLLEGDQLVIKSGIPKEQVILGVGTV 106

Query: 145 RQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA----VGSVAMSML-GSDADLGVVL 199
                    + + +++ +L      +      +       + S  M+ L   D  +G + 
Sbjct: 107 LPRENSAPWKAMREKKCFLRQNIWQDPEKYGEDRDLRKVGIRSAIMAPLLIQDNVIGTLN 166

Query: 200 FTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           F S     Y   +    + ++A  L   L+ 
Sbjct: 167 FGSNKTEAY-SQKDFVFVQQLADQLAVCLQN 196


>UniRef50_A2SNX8 Transcriptional regulator, CdaR family n=1 Tax=Methylibium
           petroleiphilum PM1 RepID=A2SNX8_METPP
          Length = 645

 Score = 46.8 bits (110), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLFPDRW----R 131
             A+ N      L  +   +  +  L ++L+   + A+ L       + L  D      R
Sbjct: 45  RIAVQNLDEVQALQRVATRILKSHDLSEILLLITQEAKQLLSADICGVLLREDDKIVMRR 104

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQH-----YLGPLNGPELLVVLPEAKAVGSVAM 186
                +     L     + L    L   +      Y+           L EA+ V S + 
Sbjct: 105 CVGNRSPETANLQMGPGQGLAGLVLAHRKPASVEDYVTSEAISRDFFHLAEAELVRSASA 164

Query: 187 SML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           + L G D  +GV+    R  S +   Q T  L  +A +    LE 
Sbjct: 165 APLLGRDDIIGVLEVWRRRPSTFTP-QDTTRLTALANLTSIALEN 208


>UniRef50_D2RQU2 Putative PAS/PAC sensor protein n=2 Tax=Halobacteriaceae
           RepID=D2RQU2_9EURY
          Length = 636

 Score = 46.4 bits (109), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 80  IANEGLFYRLLYLQRSLTAASSLDDMLM-RFHRWARDLGLAGASLRLFPDRWRLGAPSNH 138
              E +   L  + R L  +   +++     H  +  L L  + + L  +      P   
Sbjct: 234 REYERVVTSLHEVTRWLLESDDPEEICAIAVHSGSDLLELPISGVWLLEEEHGYLDPVAG 293

Query: 139 THLALSRQSFEPLRIQRLGQEQHY----LGPLNGP----ELLVVLPEAKAVGSVAMSMLG 190
           T  A +   F  L     G+   +     G +       E+  +      + S  ++ +G
Sbjct: 294 T--AGAHDEFGGLPRFNPGEGLVWDVFESGDVERFDDLREVEDIYNPDTPIRSEIIAPIG 351

Query: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
                GV++  S +   +       L+  +       L+R
Sbjct: 352 ---THGVLMTGSLEPHRFD-ETDVDLISTLVENTRAALDR 387


>UniRef50_O28789 Sensor protein n=1 Tax=Archaeoglobus fulgidus RepID=O28789_ARCFU
          Length = 908

 Score = 46.0 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 56/156 (35%), Gaps = 20/156 (12%)

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLR 124
             +E  +  L     AN  L      ++R++ +A   +++L     + A  L + G  + 
Sbjct: 235 KRMERRLERLY---KANLLL----HEVERAILSADETEEILKMTAEKLAEMLPVRGVGIT 287

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFE------PLRIQRLGQEQHYLGPLN---GPELLVVL 175
           +F +            +   R+            +Q L Q + ++  +      E  ++ 
Sbjct: 288 VFENGRARVVAVTDKKMPGFREGEMIAGEDVAKVMQTLSQGKPWVKRVEGRGEGERRLM- 346

Query: 176 PEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQG 211
                + S A+  + SD+ LG +   S +   + + 
Sbjct: 347 --ELGIKSYALIPIVSDSLLGSINVPSEEEDAFDEE 380


>UniRef50_C1AB53 Adenylate cyclase n=1 Tax=Gemmatimonas aurantiaca T-27
           RepID=C1AB53_GEMAT
          Length = 525

 Score = 46.0 bits (108), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 11/189 (5%)

Query: 54  VEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWA 113
            E      R  +    +    L + A+ N+    RL  L R      +  D+       A
Sbjct: 110 QEASATMLRERLVPSRDQ--ALADIAVNNDRATARLTQLVRIAQRLGTFGDLDGLLDAIA 167

Query: 114 RD----LGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP 169
            D          ++ L      L    +        +         + + Q  L   +  
Sbjct: 168 ADLFATFDADRVAVLLAEPDGTLDTRISRDRKGAIPRPVPRAIAHGVAERQVALLTNDAA 227

Query: 170 ELLVVLPEAKA---VGSVAMSMLGSDAD--LGVVLFTSRDASHYQQGQGTQLLHEIALML 224
                  E+     V S   + L  +    LGV+           Q     LL   A + 
Sbjct: 228 RDTRTAGESVLQQAVKSAMAAPLLGEGRGTLGVLYVDHLREHQAFQDDDLALLVAFAGIA 287

Query: 225 PELLERWIE 233
              +ER + 
Sbjct: 288 SAAVERELA 296


>UniRef50_Q4P3N9 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4P3N9_USTMA
          Length = 693

 Score = 45.6 bits (107), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 19/87 (21%)

Query: 17  DRAVVDYLIKNPEFFIRNARAVEAIR---VPHPVRGT--------VSLVEWHMARARNHI 65
           D  + ++   +P+F       ++ IR   +               VS+ +      R  +
Sbjct: 287 DAQIWEF--SHPKFLRGRPDLLDDIRRKALDSEHARVEARDLQYSVSVGQMQ---LRQQV 341

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYL 92
             ++  +  L   A  N  L      L
Sbjct: 342 DEMQFRLEEL---AEQNMALRTFTTQL 365


>UniRef50_B9LCJ4 GAF sensor signal transduction histidine kinase n=3
           Tax=Chloroflexus RepID=B9LCJ4_CHLSY
          Length = 731

 Score = 44.9 bits (105), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 16/175 (9%)

Query: 57  HMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL 116
             A        L E  A L+ +    E L   L     +     ++  +     R A   
Sbjct: 165 RQAALAVENVRLAERSARLLAK----EQLLAELGRAVGATLDLDTI--LHQTIDRLAAAF 218

Query: 117 GLAGASLRLFPDR--WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLG---PLNGPEL 171
           G    +L    +       AP   T +              +   Q ++     L+ P++
Sbjct: 219 GSGLVALLDNQETLMVVAAAPPLDTLIGRQLPLLSGSLAWVVQSGQPFVVDDCRLHAPDM 278

Query: 172 LVVLPEAKAVGSVAMSMLGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALMLP 225
            +  P+   + S  ++ L S    +G++   SR A  +   +   LL  IA  + 
Sbjct: 279 ALFGPD---IASCIIAPLRSGGRVIGMLSVVSRQAGVF-SDEDVDLLEAIAAQVS 329


>UniRef50_C6D0G7 GAF sensor signal transduction histidine kinase n=29 Tax=Bacillales
           RepID=C6D0G7_PAESJ
          Length = 559

 Score = 44.9 bits (105), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 45/167 (26%), Gaps = 12/167 (7%)

Query: 74  LLMEQAIANEGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWRL 132
            L +    N  L+ +L  + + +     ++ +          + G    SL ++  +   
Sbjct: 171 RLYQTQERNAMLYAKLGDVIQRINGVQDVNQLPIKAVQYIGDEFGWPNVSLFMYDGQQLS 230

Query: 133 GAPS-----NHTHLALSRQSFEPLRIQRLGQEQHYLGP--LNGPELLVVLPEAKAVGSVA 185
                                       L   +  +    + G EL  V        S A
Sbjct: 231 LRALYSSGKLTKEWQTLAVEAAGPIEASLRDNRIIIESSCMEGNELDSVG--IPPFRSAA 288

Query: 186 MSMLG-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
              L   +  +GV+  +S D   +        ++ +       +E  
Sbjct: 289 AIPLRVRNRTIGVMFISSPDQRQFD-DLNEDFMYSLGDHFTLCVENL 334


>UniRef50_B0R9J3 Sensor protein n=1 Tax=Halobacterium salinarum R1
           RepID=B0R9J3_HALS3
          Length = 494

 Score = 44.5 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 16/161 (9%)

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAP---SNH 138
           EG   RL    R L AA++ +++       A + LGL   S+ L+        P   S+ 
Sbjct: 127 EGTLERLHKATRDLMAATTTNEVATIASETATEVLGLPMNSIHLYSPEQDDLVPVAWSDR 186

Query: 139 THLALSRQSFEPLRIQRLGQEQHYLGPL----NGPELLVVLPEAKAVGSVAMSMLGSDAD 194
           T   L          + L    +    L    +  E   V+     + S     LG    
Sbjct: 187 TEAVLGGPPPAIPPGESLAGRAYATNTLEMYPDVREADNVMNPETPLRSELHLPLGDH-- 244

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
            GV++  S     +           +A +    LE  ++RV
Sbjct: 245 -GVLIAGSTTVGDFDTSD-----EHLAQIFAANLEAALDRV 279


>UniRef50_D2RUV6 Response regulator receiver modulated GAF sensor protein n=2
           Tax=Halobacteriaceae RepID=D2RUV6_9EURY
          Length = 700

 Score = 44.5 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 14/165 (8%)

Query: 73  ALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWR 131
             L E     E     L    R L  AS+  ++       A + L +  A+   F     
Sbjct: 132 TELRESERRYERTLTTLHETTRDLMRASTKREIYQSAVDTAGEILDVPVAAAYTFEPTNG 191

Query: 132 LGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAV------GSVA 185
           +   +    +  SR+  +P      G+   +    +  E        +         S  
Sbjct: 192 ILVHA--ASIRESRELVDPEMQFEQGEGHVW-EVFSEGESAYYGDVTRDADTKTLSRSEL 248

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           +  LG     GV++  + D   + +   T+LLH +A      L+R
Sbjct: 249 IVPLG---THGVLVAGTEDVDGFDETM-TELLHILAANTEAALDR 289


>UniRef50_B9LMD0 Sensor protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239
           RepID=B9LMD0_HALLT
          Length = 655

 Score = 44.1 bits (103), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 49/161 (30%), Gaps = 17/161 (10%)

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMR-FHRWARDLGLAGASLRLFPDRWRLGAPSNHTHL 141
           E     L      L +A +++++           L L   ++ L+       AP  +T  
Sbjct: 282 ERQLEALNREIPRLLSAETIEEVAELGVVAAHEILDLQANAIHLYDAENEELAPVAYTDG 341

Query: 142 ALSR-------QSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDAD 194
            L         +  + +  +               +  +  PE+  + S     LG    
Sbjct: 342 VLELIGDPPTFRDGQSIAWRVFADGNATAIDDIQTDTDIYNPESP-IRSELYLPLGE--- 397

Query: 195 LGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV 235
            G+++  S   S +     T     +  +L   L   + +V
Sbjct: 398 YGILMAGSPTPSKFDSQDVT-----VGELLTAHLTTALSQV 433


>UniRef50_Q1CWW4 Sensor protein n=5 Tax=Bacteria RepID=Q1CWW4_MYXXD
          Length = 773

 Score = 44.1 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 38/136 (27%), Gaps = 5/136 (3%)

Query: 100 SSLDDMLMRFHRWARDLGLAGASLRLFPDR----WRLGAPSNHTHLALSRQSFEPLRIQR 155
             L  +L    R          +L L  D         + SN           E L    
Sbjct: 395 RDLSVLLDTITRQVAYFLGDTCTLCLLSDDGTRLEVAASHSNQGEDGAPLLPGEGLSDFV 454

Query: 156 LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG-SDADLGVVLFTSRDASHYQQGQGT 214
           L   +  L P    +    L + +A+ S+    L      +G +             +  
Sbjct: 455 LRGGRPLLVPELSEDQKRELGQGEALRSLLCVPLRTQGRVVGTLSVGRMGPGRSFTQEDQ 514

Query: 215 QLLHEIALMLPELLER 230
           +L+ E+A      +E 
Sbjct: 515 ELVEELAAKAALSIEN 530



 Score = 40.6 bits (94), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 49/190 (25%), Gaps = 20/190 (10%)

Query: 54  VEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRW 112
           V       R      E   A L            RL      L+ A+++  +      + 
Sbjct: 179 VRRQSELLRQK--EAEARDAALRAAGY-----IDRLRDFTARLSEAATVPQVCRALFEQG 231

Query: 113 ARDLGLAGASLRLFPDRWRLGAPSNHTHLA---------LSRQSFEPLRIQRLGQEQHYL 163
               G    ++ L           +              +   +  PL      Q+  ++
Sbjct: 232 LVAAGAKAGTVNLLDAEGEALEVVDAIGYPESVLSRWRRIPMTAAMPLVESLREQQAIWV 291

Query: 164 GPLNGPELLVVLPEAKAVGSVAMS--MLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIA 221
           G          L + + +   A++  +L     LG +  +      +           +A
Sbjct: 292 GSPEEWSARYPLMDTRGLHEAALALPLLVKGRALGAIGLSFARPRTFT-EMDRAFFTALA 350

Query: 222 LMLPELLERW 231
               + L+R 
Sbjct: 351 HACAQALDRV 360


>UniRef50_A8P5V6 HSF-type DNA-binding domain containing protein n=1 Tax=Brugia
           malayi RepID=A8P5V6_BRUMA
          Length = 479

 Score = 44.1 bits (103), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 18/102 (17%)

Query: 3   QPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGT------------ 50
            P E+     +E  D+  +++   +P F   +   +  I+   P                
Sbjct: 150 TPIEKSSLARSE-SDQDHLEF--SHPNFIQHHPELLVNIKRKTPGNRNNENNSVAMPPKE 206

Query: 51  VSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYL 92
           +S++   + + R     +E  MA L+     NE ++ ++ +L
Sbjct: 207 ISVLVDEIRQLREKQRTMENKMAHLV---KENEAMWQQVSHL 245


>UniRef50_C0G2J1 Putative PAS/PAC sensor protein n=1 Tax=Natrialba magadii ATCC
           43099 RepID=C0G2J1_NATMA
          Length = 1154

 Score = 43.7 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 83  EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTH- 140
           E     L    R L  A +  ++       A D L L  +++ LF     +  P+  +  
Sbjct: 448 EEALTALHRTARELLYAETDREIAAITVDDATDVLDLEASAIYLFDTDENVLRPAARSES 507

Query: 141 -LALSRQSFEPLRIQRLGQEQHYLGPLN----GPELLVVLPEAKAVGSVAMSMLGSDADL 195
             AL          Q +  +    G         +  ++      + S A   LG     
Sbjct: 508 MAALHGPLSAQQVGQGIVGDVFVDGESRLLADVHDSPLLAEPTTEIRSAAFVPLGDH--- 564

Query: 196 GVVLFTSRDASHYQQGQG--TQLLHEIALMLPELLERW 231
           GV +  S +   + +  G  T LL   A      L+R 
Sbjct: 565 GVFVAGSPEVGVFDEVSGEVTDLL---ATTAEAALDRV 599


>UniRef50_D2AY92 Serine phosphatase RsbU regulator of sigma subunit-like protein n=5
           Tax=Actinomycetales RepID=D2AY92_STRRD
          Length = 702

 Score = 42.9 bits (100), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 13/158 (8%)

Query: 84  GLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDRWRLGAPSNHTHLA 142
            +++ L  L  +LT A+ + D++     +     G    +L +  D     A        
Sbjct: 300 AIYHVLH-LASALTEAAGVQDVVGLVADQIMPAFGGQALALLVAEDGRLRVAGHRGYPPN 358

Query: 143 LSRQSFEPLRIQRLGQEQHYLGPL-----NGPELLVVLPEA----KAVGSVAMSML-GSD 192
           ++ Q             +  +  +     +  EL  + P A      + + A   L  S 
Sbjct: 359 ITEQYDRLPLTSPTPSVRTMVTGVPSFFESHEELDQIYPMAVAPDDGMAAWAFIPLIASG 418

Query: 193 ADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
             +G  +        +       LL  +  ++ + LER
Sbjct: 419 RPIGTCVLAFSRPHRFTVE-ERALLTSLGGLIAQALER 455


>UniRef50_Q3INK9 GAF domain protein; predicted DNA binding protein n=1
           Tax=Natronomonas pharaonis DSM 2160 RepID=Q3INK9_NATPD
          Length = 529

 Score = 42.9 bits (100), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 55/195 (28%), Gaps = 23/195 (11%)

Query: 56  WHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD 115
            ++   RN    +      L         +   +     ++  A+   ++          
Sbjct: 117 RNITARRNRQAAIRRQHDELDTLHR----ISQSVHRAISAVAEAADRAEIEQAVCDRLTA 172

Query: 116 LGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVV- 174
             L  A+  +                ++     E  R+  L  E   +  +   E+ VV 
Sbjct: 173 SELYRAA-WVGRSGPGKTMTPTAGTGSVDGLLSEVERLNALDWEGPAVVAVETGEIQVVQ 231

Query: 175 ------LPE-------AKAVGSVAMSML-GSDADLGVVLFTSRDASHYQ-QGQGTQLLHE 219
                  PE        + + S A   L   D+ +GV+   S   + +  + Q    L  
Sbjct: 232 QIAESDFPEEVKQAADGRDIASGASVPLVHQDSVVGVLSVYSSRPTAFTDREQAA--LRR 289

Query: 220 IALMLPELLERWIER 234
           +  ++   +     R
Sbjct: 290 LGEVVGFAVTALRMR 304


>UniRef50_Q1D2B5 Response regulator/GGDEF/GAF domain protein n=2
           Tax=Cystobacterineae RepID=Q1D2B5_MYXXD
          Length = 616

 Score = 42.9 bits (100), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 21/175 (12%)

Query: 54  VEWHMAR--ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHR 111
           V+  + R   R     L +     +E A      F+ L      L +   L+ +  R   
Sbjct: 114 VDRALERASLRRERTQLRDEN---LEFAR-----FHNLHQRCLELLSHPDLEWLQERLTS 165

Query: 112 WARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPEL 171
               +     S  L+    R           L RQ       +++  E    G L   + 
Sbjct: 166 ELAAI-CDAQSAALWVVDDRGDLVLRAYRGLLDRQ----FLAEKMSPEGPLSGRLREAQP 220

Query: 172 LVVLPEAKAVGSVAMSMLGSDADLGVVL-FTSRDASHYQQGQGTQ--LLHEIALM 223
            +   E     SV    L +  ++  +   +   +  ++        LL + A +
Sbjct: 221 WLARDERS---SVMYVPLVASGEVVGLAQLSDPLSGDFRPEHSRDARLLGDFAAV 272


>UniRef50_Q1IKT0 Sensor protein n=1 Tax=Candidatus Koribacter versatilis Ellin345
           RepID=Q1IKT0_ACIBL
          Length = 987

 Score = 42.6 bits (99), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 56/214 (26%), Gaps = 51/214 (23%)

Query: 31  FIRNARAVEAIRV--------PHPVRGTVSLVEW----HMARARNHIHVLE--ENMALLM 76
           F  N   +  + +            R  + L+       + R R+    L   + +  L 
Sbjct: 141 FASNGDVLGTLGIYTLEPASPTDRARQAIDLLARTAGIAIERHRSESQRLRYQKQIETLN 200

Query: 77  EQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPS 136
           +                  L A   L  ++      AR+   +GA+   F          
Sbjct: 201 DTG--------------ILLAAERDLHKIVQAATDTAREF--SGAAFGAFFYNEIRADGE 244

Query: 137 NHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAK----------------- 179
           ++    LS    E      + +     GP    E  V L + +                 
Sbjct: 245 SYMLYTLSGAPREAFEKFPMPRNTAVFGPTFAGEGTVRLADVRKDPRYGKNAPYHGMPEG 304

Query: 180 --AVGSVAMSML--GSDADLGVVLFTSRDASHYQ 209
              V S     +   S   LG + F   + + + 
Sbjct: 305 HLPVCSYLAVPVVSRSGKVLGGLFFGHSEPNRFT 338


>UniRef50_A9AWW6 Sensor protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779
           RepID=A9AWW6_HERA2
          Length = 531

 Score = 42.6 bits (99), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 65/213 (30%), Gaps = 40/213 (18%)

Query: 32  IRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLY 91
           +     +  +RV              + R ++    L      L             L  
Sbjct: 110 VNRDELLARMRV--------------LLRLKHTRRALHREQERL-----------RFLYR 144

Query: 92  LQRSLTAASSLDD-MLMRFHRWARDLGLAGASLRLFPDR---WRLGAPSNHTHLALSRQS 147
           + ++L  +  +D  +    +     LG +  S+ L  D+   WR      H   A + Q+
Sbjct: 145 VSQTLHRSLDIDQVLPEALNAINELLGASRGSVLLLDDQNRVWRRILFRPHLPPAEAEQA 204

Query: 148 FEPLRIQRLGQEQHYLGPL-------NGPELLVVLPEAKAVGSVAMSMLGS---DADLGV 197
            + +  + L       G +       N P       + + +GS     L +   +  +GV
Sbjct: 205 IQAVLREGLASYALRTGEVQIVEDAQNDPRWKHFYDDREEIGSALALPLHNYAQNTIIGV 264

Query: 198 VLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            +      + ++    T L+  +   L   L  
Sbjct: 265 FILVHPQRNFFRTELET-LIKALTDQLSVALTN 296


>UniRef50_C4XQM5 Putative uncharacterized protein n=2 Tax=Desulfovibrio
           RepID=C4XQM5_DESMR
          Length = 427

 Score = 42.6 bits (99), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 57/201 (28%), Gaps = 27/201 (13%)

Query: 57  HMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAA-SSLDDMLMRFHR---- 111
            +   R     L   +      A         +L +   L  A            +    
Sbjct: 91  KIEGLRKANPGL-VQLEHRFGLAKKAHEKAKLMLEIFYELINAGQDFQTADEILEQSAEV 149

Query: 112 WARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPEL 171
             ++L       RL  +       + +TH   +   F     + L      +  +  P +
Sbjct: 150 LLKELKADLYVCRLRDESGHWVNIAANTHTGRATPIFVKFMEEALP-HHPVMRSVANPRM 208

Query: 172 LV-----VLPEAKAVGSVAMSM------------LG--SDADLGVVLFTSRDASHYQQGQ 212
           L      +L   +   S+                L    D   G+++  S+ A+++    
Sbjct: 209 LFVRSNNLLGPERGGESIDCVPYLEGYRCRLSFFLRGPDDKAFGLIMLYSKKANYFD-RY 267

Query: 213 GTQLLHEIALMLPELLERWIE 233
            T  L + A ++   + R +E
Sbjct: 268 ETDFLADCARIVSLTVGRQLE 288


>UniRef50_B8GBZ1 Sensor protein n=3 Tax=Chloroflexus RepID=B8GBZ1_CHLAD
          Length = 2783

 Score = 42.2 bits (98), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 59/186 (31%), Gaps = 19/186 (10%)

Query: 59   ARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LG 117
            AR R     LE     L+      E L   +  +   LT    LD ++ R      D L 
Sbjct: 2212 ARVRERTAELE-QATQLLS--EEKERL-EAVNRIALELTTQLDLDLIIQRALALISDSLQ 2267

Query: 118  LAGASLRLFPDRWRLGAPSNHTHLALSRQSF----------EPLRIQRLGQEQHYLGPLN 167
            +   SL L              H     Q+           E L    +  ++       
Sbjct: 2268 VDRGSLMLRDVESGALICRAVLHGRGQVQAANVPLRFANNTEGLAGWIMQHQEPVNIRDV 2327

Query: 168  GPELLVV--LPEAKAVGSVAMSMLGSDAD-LGVVLFTSRDASHYQQGQGTQLLHEIALML 224
              +   V     A  V SVA   L +    +GV++ +S   +++   Q   LL  IA ++
Sbjct: 2328 THDPRWVQESGRADTVRSVAGVPLQTGDTAIGVIILSSPQPNYFSDSQ-MNLLGTIASVI 2386

Query: 225  PELLER 230
               +  
Sbjct: 2387 AAAVYN 2392


>UniRef50_Q1PXD5 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia
           stuttgartiensis RepID=Q1PXD5_9BACT
          Length = 483

 Score = 42.2 bits (98), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 18/168 (10%)

Query: 80  IANEGLFYRLLYLQR------SLTAASSLDDMLM-RFHRWARDLGLAGASLRLFPDR--- 129
             +E L  RL  L        +L  +  L+++     +     L +      L  D    
Sbjct: 22  KESEALKERLFELYLLYSLSKNLNVSLQLNELFHNTINVLKESLRIEDFCFMLIDDECNE 81

Query: 130 ---WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVL--PEAKAVGSV 184
              W++   S      ++ +  E +        +  L P    +   +    +   +GS 
Sbjct: 82  LKMWKVDDCSFGEAKGITFKIGEGISGLVAQTGESILIPDTDKDPRFLFYKGKIPDIGSF 141

Query: 185 AMSMLG--SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
               L   +D  +GV+    ++ + ++       +  IA  +   ++R
Sbjct: 142 ISIPLKLNNDKVIGVLNIHKKEKNAFRDTDKMLFVA-IAHNVAIAIDR 188


>UniRef50_Q0SJD9 Putative uncharacterized protein n=3 Tax=Rhodococcus
           RepID=Q0SJD9_RHOSR
          Length = 746

 Score = 41.8 bits (97), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 72  MALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLFPDRW 130
           +     +A     L   L  L       + LD +L      A  L G+  AS+    D  
Sbjct: 136 LDEAAHRAREQHALAE-LGQLAVD----ADLDTLLPAATGAAASLIGVQCASISRITDTD 190

Query: 131 RLGAPSNHTHLALSR---QSFEPLRIQRLGQEQHYLGPLNGPELLVVL--PEAKAVGSVA 185
            L   +   H    R             L   +  + P    E          + + S  
Sbjct: 191 ALEVLAYRGHPPQPRSFATGSASQPGYALATGEVVVCPNRQQETRFATTTMAGRGLRSGI 250

Query: 186 MSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
              +G     GV+   S     Y   +    L  +A +L   + R
Sbjct: 251 SVPIGDGTRWGVLTVHSAHPRDYT-DRDVAFLRAVAAVLSAAIGR 294


>UniRef50_A9WAB1 Sensor protein n=3 Tax=Chloroflexus RepID=A9WAB1_CHLAA
          Length = 796

 Score = 41.8 bits (97), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 21/166 (12%)

Query: 51  VSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF- 109
           +SL      R    + V +  +     +          L  L  +L  +  +  ML    
Sbjct: 222 ISL--RRQYRLEEALRVADTQLQTANARLRTLSRQTDHLHSLIVALMTSRDVPTMLNLLG 279

Query: 110 HRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP 169
            R +  +    A + L+ D+  L   ++H     +    E +  Q +   Q Y   L   
Sbjct: 280 ERLSALMEADCAWVTLYDDQGNLQLVASHHLPVST----EGVGPQPVPLPQAYETALEQK 335

Query: 170 ELLVV-------------LPEAKAVGSVAMSM-LGSDADLGVVLFT 201
            + +              L E     +V M   LG  A LG V   
Sbjct: 336 RVTLFTNQQVQMLAPVAALTERSTWQAVIMLPLLGEQAPLGAVCLA 381


>UniRef50_B9LQ48 Sensor protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239
           RepID=B9LQ48_HALLT
          Length = 529

 Score = 41.8 bits (97), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 39/154 (25%), Gaps = 17/154 (11%)

Query: 65  IHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASL 123
           +       A L  +          L    + L   +  +        +  + LG   A++
Sbjct: 115 VREERAEQAELHRRTR----TLEALHEATQDLLKTTDREFAAEAAVEYVEEVLGHPIAAI 170

Query: 124 RLFPDRWRLGAPSNHTHLALS--------RQSFEPLRIQRLGQEQHYLGPLNGPELLVVL 175
            L+ +   +  P   T  A                +  +               +     
Sbjct: 171 WLYDEDRDILDPIVWTDAADDLVGDHPTFGPDASSISWEAFESGDPVYVSDTHADTERHN 230

Query: 176 PEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQ 209
           P++  + S  +  LG     G++     D   + 
Sbjct: 231 PDST-IRSELILPLG---RYGLINVGDTDPDAFD 260


>UniRef50_B2J240 Sensor protein n=1 Tax=Nostoc punctiforme PCC 73102
           RepID=B2J240_NOSP7
          Length = 1254

 Score = 41.8 bits (97), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 57/196 (29%), Gaps = 27/196 (13%)

Query: 50  TVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF 109
            V + E      R         +A L      +E L   L      L +     D++   
Sbjct: 634 AVDITERE-RILRER------QLAEL-ALQERSERL-KLLSETTSDLLSTERPLDLMNSL 684

Query: 110 HRWAR-DLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG 168
                  + L      L                 ++ + F+ +  + L   Q   G +  
Sbjct: 685 FSKLSAQMDLHFYFHYLIETHDNQQKLRLVAWNGITDEVFQAI--EYLEFNQGMCGLIAQ 742

Query: 169 PELLVV--------LPEAKAVGS-----VAMSML-GSDADLGVVLFTSRDASHYQQGQGT 214
               +V         P A+ + S      A   L      LGV+ F SR  +H+  G   
Sbjct: 743 ERRQIVVNNVLNYTHPNAQILKSLEITAYAGQPLIAQGKLLGVLSFASRTRTHFTSG-EI 801

Query: 215 QLLHEIALMLPELLER 230
            LL   +  +   LER
Sbjct: 802 ALLQATSDQIAVALER 817


>UniRef50_Q746T1 Sensor protein n=1 Tax=Geobacter sulfurreducens RepID=Q746T1_GEOSL
          Length = 533

 Score = 41.8 bits (97), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 16/180 (8%)

Query: 62  RNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAG 120
           R     + + MA   E      GL  RL+ + + L+ A SLD++       AR+L    G
Sbjct: 113 RGSNRDITDRMAAQEEN-RRLGGLMERLVRVVQELSRARSLDEITAVVRTAARELVSADG 171

Query: 121 ASLRL-------FPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLV 173
           A+  L       + D   +          L R     +    L ++   +  +   + + 
Sbjct: 172 ATFVLRENGNCFYADEDAIAPLWKGLRFPLERCISGWVM---LNRQAAVIEDIYQDQRIP 228

Query: 174 VLPEAKA-VGSVAMSMLGSDADLGVVLFTSRDASHYQQ-GQGTQLLHEIALMLPELLERW 231
           V       V S+AM  +  +  +G     +  A  ++   Q   ++  +A      +E  
Sbjct: 229 VEAYRPTFVQSLAMVPIRGEDPIG--AIGTYWARRHRPSEQEISVIQALADTTSVAMENV 286


>UniRef50_C4FHI4 Putative uncharacterized protein n=1 Tax=Sulfurihydrogenibium
          yellowstonense SS-5 RepID=C4FHI4_9AQUI
          Length = 459

 Score = 41.4 bits (96), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%)

Query: 37 AVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYL 92
           + ++ + H     + ++E  +   +  +  L++  A + E    NE +   L  L
Sbjct: 10 LLSSVALAHASEDKIKILEDQIKHLKEEVQKLKQEQASVKEVKEENESIKEELRKL 65


>UniRef50_A7HH95 Sensor protein n=1 Tax=Anaeromyxobacter sp. Fw109-5
           RepID=A7HH95_ANADF
          Length = 912

 Score = 41.4 bits (96), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 12/176 (6%)

Query: 66  HVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWAR-DLGLAGASLR 124
              +E      E+A  +      L  +   L+ A + + +        R   G +  SLR
Sbjct: 196 RDRQEQTERARERAEESARRLKLLQEVTAGLSRADTAEAIAQLVVDRVRVAAGASAGSLR 255

Query: 125 LFPDRWRLGAPSNHTHLA------LSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEA 178
           L      + A  +  H        +S +   P+      +E  +LG +   +      E 
Sbjct: 256 LLEGDELVLAEESGAHAVRGRFPRISTRDSYPVSEVVRRREPIWLGNVEEFQRFPAFAET 315

Query: 179 KA---VGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
            A   V +     L G    LG +     +   + Q      L  +A    + L R
Sbjct: 316 AAQLGVRAGVAMPLVGHGYVLGALSLGFAEPRAFGQD-ERDFLLAVAEQCAQALGR 370


>UniRef50_D2L155 GAF sensor hybrid histidine kinase n=1 Tax=Desulfovibrio sp.
           FW1012B RepID=D2L155_9DELT
          Length = 740

 Score = 41.4 bits (96), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 45/213 (21%)

Query: 58  MARARNHIHVLEENMALL-MEQAIANEGLFY---------------------------RL 89
           + R+R  +      +  + +EQA  NE L                             RL
Sbjct: 125 LDRSRRELLQQRNALEAMVIEQARVNERLQREVRERQLVERELRQTKEEAERLGGKQERL 184

Query: 90  LYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLFPDRWRLGAPSNHTHLALSRQSF 148
               ++L+ A  L  M+    + AR+L G  GAS  L        A  +        + F
Sbjct: 185 AQAAQALSMAKDLASMMAIVVKAARELSGAQGASFILPDGDDCFHAAEDAVEPLWKGRRF 244

Query: 149 EP---LRIQRLGQEQHYLGPLNGPELLVVLP--EAKAVGSVAMSMLGSDADLGVVLFT-- 201
                L    L   +  +      E   +    +   + S+ ++ +G +A +  +     
Sbjct: 245 PKKNCLSGWVLDNGEPAVIQDVAGEPGALPGVCQGTFIRSLVIAPVGREAPVAALGIYWA 304

Query: 202 ---SRDASHYQQGQGTQLLHEIALMLPELLERW 231
              + D          +LL+ +A +   ++E  
Sbjct: 305 TGLAPDPE------AVRLLYSLADLASVVMENL 331


>UniRef50_UPI0001C425B7 multi-sensor hybrid histidine kinase n=1 Tax=Bacillus pseudofirmus
           OF4 RepID=UPI0001C425B7
          Length = 539

 Score = 41.4 bits (96), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 49/176 (27%), Gaps = 23/176 (13%)

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLAGASLRLFPDR 129
            +  L+     NE     L      L       ++L    +  +  L L      +F +R
Sbjct: 111 QVDQLI---TQNEKKLALLAEASSDLIFQEDPKELLDNLFNSLSHYLDLDVYFNYIFDER 167

Query: 130 WRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPE------------ 177
                  N+  +              L   Q   G     +  ++  +            
Sbjct: 168 ANKLRLMNYYGIPKEIADGM----CCLDFGQAVCGTAALNQHKIIAEDISSSIDPKVNLI 223

Query: 178 -AKAVGSVAMSML-GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERW 231
            +  + +     L      +G + F S+  +H+ +     L+  I   +   L+R 
Sbjct: 224 KSLGIQAYVCHPLISYGKLVGTLSFGSKTRTHFIKE-ELDLIERICTQVSITLDRL 278


>UniRef50_B6A1B8 Sensor protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304
           RepID=B6A1B8_RHILW
          Length = 727

 Score = 41.0 bits (95), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 45/180 (25%), Gaps = 21/180 (11%)

Query: 59  ARARNHIHVLEENMALLMEQAIAN--EGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDL 116
           +  R     LE         A  N  E L   +      LT A             A + 
Sbjct: 131 SALRERTRALEVLNRAGAILARENDLERLVQAVTDAGVELTGAQ-FGAFFYNLVDHAGES 189

Query: 117 -------GLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP 169
                  G+   +   FP        S         +S +  +  R GQ   Y G   G 
Sbjct: 190 YMLYSLAGVPHEAFSSFPMPRNTAVFSATFKGEGIVRSDDITQDPRYGQNAPYAGMPEGH 249

Query: 170 ELLVVLPEAKAVGSVAMSML--GSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPEL 227
                      V S     +   ++  +G + F   D   + +     LL         +
Sbjct: 250 LP---------VRSYLAVPVISRTEEVIGGLFFGHADTGVFSEESERGLLGLAGETAVAI 300


>UniRef50_C7NUQ8 Sensor protein n=1 Tax=Halorhabdus utahensis DSM 12940
           RepID=C7NUQ8_HALUD
          Length = 1045

 Score = 41.0 bits (95), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 40/155 (25%), Gaps = 11/155 (7%)

Query: 83  EGLFYRLLYLQRSLTAASSLDDML-MRFHRWARDLGLAGASLRLFPDRWRLGAP--SNHT 139
           E     L    R        + +        A  L     ++ L+ +      P      
Sbjct: 675 EETLEALHKRTRPFITTPDQEVVAEHAVETVASVLDQGINTVWLYDEDSETLEPAAWTDA 734

Query: 140 HLALSRQSFEPLRIQRLGQEQHYLGP-LNGPELLVVLPEA---KAVGSVAMSMLGSDADL 195
              L  +         L  +    G  L   E+  V         + S  +  LG     
Sbjct: 735 AAELLGEMPSYTGEGSLTWDAFRSGEVLVIDEMSTVNGRHNPQTPIRSEIILPLGE---Y 791

Query: 196 GVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230
           GV+   S +   ++      L   +  M+   L R
Sbjct: 792 GVMNIGSTEPDAFE-DIDISLARVLGDMVEAALIR 825


>UniRef50_B8HUB0 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HUB0_CYAP4
          Length = 882

 Score = 41.0 bits (95), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 3/109 (2%)

Query: 125 LFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQH-YLGPLNGPELLVVLPEAKAVGS 183
           L+  + +   P+         Q+ E  +   L +    +L  +  P      P    V S
Sbjct: 367 LWFSQEQNFIPAPSNIHHPILQTIERRQPLLLQEVNPDWLDRIAAPSQQSAFPWQSQVRS 426

Query: 184 VAMSMLGS-DADLGVVLFTSRDA-SHYQQGQGTQLLHEIALMLPELLER 230
           + +  L + +  LG +     DA   +       L  ++A      L+ 
Sbjct: 427 LLILPLSARNRQLGALTLALTDASQRFYNTIDLSLAEDLAYRAALALDN 475


>UniRef50_A9AUL9 Anti-sigma-factor antagonist n=1 Tax=Herpetosiphon aurantiacus ATCC
           23779 RepID=A9AUL9_HERA2
          Length = 689

 Score = 40.6 bits (94), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 54/203 (26%), Gaps = 39/203 (19%)

Query: 38  VEAIRVPHPV------RGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLY 91
           +  I +P             SL+   +   RN I  L              + L      
Sbjct: 370 LAQIDLPADQINGFLATAHTSLLHTVLELQRNEITGL--------------DRLLAANHE 415

Query: 92  LQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPL 151
           L   L +             W + L ++ A L L+ +  +         +     S    
Sbjct: 416 LSMLLVSNQKQQTGK---LAWMQRLPVSIACLALWDE--QKPGFLRLASIYSKDGSSTIK 470

Query: 152 RIQRLGQEQHYLGPLNGPELLVVLPEAKAVGS---VAMSML-GSDADLGVVLFTSRDASH 207
                          +       L +A+ + S   VA   +  +  D G++ F   D   
Sbjct: 471 AGSHCHG--------SEFPPAEFLEQARQLNSSGYVACVPIVTASHDWGILAFGHADVQK 522

Query: 208 YQQGQGTQLLHEIALMLPELLER 230
                 +  +   A +L   LE 
Sbjct: 523 TIADINSLYI--WASILGSSLEH 543


>UniRef50_A3CRU2 Sensor protein n=1 Tax=Methanoculleus marisnigri JR1
            RepID=A3CRU2_METMJ
          Length = 1329

 Score = 40.6 bits (94), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 37/137 (27%), Gaps = 13/137 (9%)

Query: 103  DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHY 162
            + +          L L+G  + L     +         L     +   +    L     Y
Sbjct: 978  EALERVLGATLDLLNLSGGGIYLIEPGRQSARLVCTQRLPEGFPAHPCIPDITLA---PY 1034

Query: 163  LGPLNGPELLVVLPEAKAVGS------VAMSML-GSDADLGVVLFTSRDASHYQQGQGTQ 215
               L   E   + P+     S       A   +      +G +   SRD   +       
Sbjct: 1035 ATVLVAGET--LFPDECTEESGETPHTYASIPIIAHGRIIGALNVASRDDRRF-SDADRS 1091

Query: 216  LLHEIALMLPELLERWI 232
            LL  I   +   +ER I
Sbjct: 1092 LLTAIGREIGNSVERTI 1108


>UniRef50_C5CH99 Sensor protein n=2 Tax=Bacteria RepID=C5CH99_KOSOT
          Length = 899

 Score = 40.6 bits (94), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 148 FEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG-SDADLGVVLFTSRD-- 204
           F    + +LG+ + ++ P    E L + PE   V S  +  L   D   G+++ T R+  
Sbjct: 204 FSEDLLLKLGEGKVFISPKTAGEYLSIFPEDFEVRSFILVPLDVEDKIEGLIIITDRESE 263

Query: 205 -----ASHYQQGQGTQLLHEIALMLPELLER 230
                   Y   +  +++ +I+  L   + R
Sbjct: 264 EAEFRPHRYLDEEDLEMVQDISNRLTVAISR 294


>UniRef50_Q5UXF3 Sensor protein n=1 Tax=Haloarcula marismortui RepID=Q5UXF3_HALMA
          Length = 1006

 Score = 40.3 bits (93), Expect = 0.049,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 20/192 (10%)

Query: 55  EWHMARARN--HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRW 112
           EWH    R       +      + E+    + +   L    R L    S +         
Sbjct: 227 EWHNRIIREDGETVAIFSQFQEITERRQRQQRI-EALHDTTRELMHVESREAAAELVVET 285

Query: 113 ARD-LGLAGASLRLFPDRWRLGAPSN---------HTHLALSRQSFEPLRIQRLGQEQHY 162
           ARD LGL  +++ L  +      P+            H   S        +   G+++ +
Sbjct: 286 ARDLLGLPLSAVFLADESADALRPTAVTDQAQAIIDDHPTFSEGDSLVWEVFDSGEQRVF 345

Query: 163 LGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIAL 222
               +             V S  +  LG     GV++  S DA+ ++      L+  +A 
Sbjct: 346 ---NDVSTHPNRYNPDTDVCSELLIPLGDH---GVLIAASTDAAAFE-DASVSLMRTLAA 398

Query: 223 MLPELLERWIER 234
              E L R   +
Sbjct: 399 NTEEALSRLDRQ 410


>UniRef50_Q1IMN3 Metal dependent phosphohydrolase n=1 Tax=Candidatus Koribacter
           versatilis Ellin345 RepID=Q1IMN3_ACIBL
          Length = 432

 Score = 40.3 bits (93), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 10/150 (6%)

Query: 71  NMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASL-RLFPD 128
           ++A +  +       F  L  L  +LTA            R   D +G   ++L R    
Sbjct: 2   HLAEIKNKFRKLFTTFEALSDLGPALTAERDFAQTADELLRLLMDAIGARESALFRFCDK 61

Query: 129 RWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGP--LNGPELLVVLP-----EAKAV 181
              L + ++   L+    +  PL    +       GP  L       +L          +
Sbjct: 62  PAVLTSVASRGFLSFPSPAVIPLLPSHVHALTTARGPQLLAAESRRTLLSSNGNFPPDLI 121

Query: 182 GSVAMSMLGSDADLGVVLFTSRDASHYQQG 211
              A   +G    +G++ F   D SHY + 
Sbjct: 122 QLAAPLRVGQ-KLVGMLAFGQPDESHYGEE 150


>UniRef50_B9YRF1 Sensor protein n=4 Tax=Cyanobacteria RepID=B9YRF1_ANAAZ
          Length = 1322

 Score = 40.3 bits (93), Expect = 0.060,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 42/190 (22%), Gaps = 40/190 (21%)

Query: 44  PHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYL--------QRS 95
           P   +  ++ VE  +      I  L+  +         NE L  +   L        Q  
Sbjct: 114 PFQTQEVIARVENQL-----RIRRLQNQLVE------QNEQLLQKTQALADFSSSLKQLH 162

Query: 96  LTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQR 155
               +    +   F  +       G  +  F                  +  FE L    
Sbjct: 163 RINMTDFHHVDDLFLDYLD----TGCKVLRFSAGAVGKINHQTYSFLAVKSEFESLVPGL 218

Query: 156 -LGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG---------------SDADLGVVL 199
            +     Y   +   E  V       +  +    L                     G + 
Sbjct: 219 EINLSDAYCRKVVEQEKTVTFQNVGTIEEMCCHPLYQRLKIESYIGTPIWVDGKIYGALC 278

Query: 200 FTSRDASHYQ 209
           F S  A  + 
Sbjct: 279 FFSTTA-RFD 287


>UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain) n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9FTU9_SORC5
          Length = 859

 Score = 39.9 bits (92), Expect = 0.067,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 25/181 (13%)

Query: 78  QAIANEGLF----------YRLLYLQRSLTAASSLDDMLMRFHRWARDL-GLAGASLRLF 126
           +AI NE +F           +L      L AA++   ++      AR++  +  A++ L+
Sbjct: 364 RAIQNERVFVQLERAKIEQGKLYRAAEGLGAATTEAGVIEAGVTSAREITSVDFAAVTLY 423

Query: 127 PDRW---RLGAPSNHTHLALSRQSF---EPLRIQRLGQEQH--YLGPLNGPELLVVL--P 176
            +      + A S      L+ Q F     L    L       Y G  +    +V     
Sbjct: 424 DEAQKVHEIRAVSGDGVAELTGQRFRHNAGLVSMVLQNRHPLPYRGEYDEKRQVVFTRRV 483

Query: 177 EAKAVGSVAMSMLG-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLE--RWIE 233
              ++ S+ +  L   D  LG ++  SR  + +     +  L  +A  +   L   R + 
Sbjct: 484 TPPSMPSIIVLPLVVHDRPLGTLVLGSRRRAAFTDSVRST-LEVLASHMAVSLSNARMVR 542

Query: 234 R 234
           R
Sbjct: 543 R 543


>UniRef50_A0YG59 Putative uncharacterized protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0YG59_9GAMM
          Length = 110

 Score = 39.9 bits (92), Expect = 0.079,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 1/83 (1%)

Query: 64  HIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGAS 122
            + VL   +  L ++A+ NE +  R    +R L   + LDD+       A D        
Sbjct: 19  RLDVLGSKVNDLHQKALENEHIMRRYQRFERQLLGYNGLDDLFKGMPCNAVDYFQFDQVE 78

Query: 123 LRLFPDRWRLGAPSNHTHLALSR 145
           L L+     L A  +   LA+  
Sbjct: 79  LGLYGPEHTLLALLSEEMLAMPG 101


>UniRef50_C7P2E1 Putative PAS/PAC sensor protein n=1 Tax=Halomicrobium mukohataei DSM
            12286 RepID=C7P2E1_HALMD
          Length = 1589

 Score = 39.9 bits (92), Expect = 0.082,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 49/189 (25%), Gaps = 20/189 (10%)

Query: 61   ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRF-HRWARDLGLA 119
             R     +E     L  Q  ANE +      + ++L  A+  D +      R   D  ++
Sbjct: 1178 LREREAEIEAQNERLRRQIRANETI----RSVDQTLIGATDRDQLEAAVCERLVDDEDIS 1233

Query: 120  GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGP---------- 169
             A +  F                 S              +      ++            
Sbjct: 1234 FAWIGSFDSGGETLQARAWAGEGESYLDTPSFDRSATHSDPAVSAAVDDEPVAVSNIAQN 1293

Query: 170  -ELLVVLPEAKAVG--SVAMSMLG-SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLP 225
             +       A AVG  S     +   D   GV+   + +   +     T +  E+   + 
Sbjct: 1294 VQQAAWRRAALAVGHQSALAVPVSLDDYQYGVLAVYADEPDVFG-EFETAVFAELGTSIA 1352

Query: 226  ELLERWIER 234
              +     R
Sbjct: 1353 NAITSITTR 1361


>UniRef50_P73011 PleD n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73011_SYNY3
          Length = 464

 Score = 39.5 bits (91), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/143 (9%), Positives = 42/143 (29%), Gaps = 5/143 (3%)

Query: 89  LLYLQRSLTAASSLDDMLMRFHRWARD-LGLAGASLRLFPDRWRLGAPSNHTHLALSR-- 145
           L     ++   + L +++       R  + +    L L+        P  +      +  
Sbjct: 106 LSQFANAVATCTGLQELIEVIRAEIRQVISVDEIFLYLYDQSQDSLTPLLYKTEESLQNF 165

Query: 146 QSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG-SDADLGVVLFTSRD 204
           ++ E +  + L   Q  +      +   +  +   + S+    L   ++ +GV+      
Sbjct: 166 KAIEKIVERVLKLNQVEVIDDIQNDQDYL-NQPSKIRSLLCYSLTVQNSIIGVLGLAHYQ 224

Query: 205 ASHYQQGQGTQLLHEIALMLPEL 227
             H+              +   +
Sbjct: 225 VKHFDSSDLNLFSTLTGQVAAAI 247


>UniRef50_D2RWS1 Putative PAS/PAC sensor protein n=1 Tax=Haloterrigena turkmenica
           DSM 5511 RepID=D2RWS1_9EURY
          Length = 553

 Score = 39.5 bits (91), Expect = 0.087,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 43/173 (24%), Gaps = 6/173 (3%)

Query: 61  ARNHIHVLEENMALLMEQAIA-NEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLA 119
            R     LE  +  +        +         +      S L D       W   + + 
Sbjct: 138 LREEHRTLEHVLERVDGLLRDVTDAAVGATTREEIERAVCSRLADTEPYVLAWIGRVDVT 197

Query: 120 GASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNG-PELLVVLPEA 178
              L           P     L L      P        +   +  L+   +     PE 
Sbjct: 198 NRRLSPREWASAGDVPLEDGDLVLGSDESHPAVRALADGDAQVVQDLDSFDDAERWWPEG 257

Query: 179 --KAVGSVAMSMLGSDA-DLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELL 228
                 SVA   L       GV+   + + S +   +   +L  +A  +   +
Sbjct: 258 AGDRFRSVAALPLRYGDVAYGVLAVFADEPSAF-SERELLVLDSLAGTISTAM 309


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.309    0.152    0.415 

Lambda     K      H
   0.267   0.0466    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,459,928,002
Number of Sequences: 3077464
Number of extensions: 66462652
Number of successful extensions: 284013
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 252
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 283060
Number of HSP's gapped (non-prelim): 600
length of query: 235
length of database: 1,040,396,356
effective HSP length: 125
effective length of query: 110
effective length of database: 655,713,356
effective search space: 72128469160
effective search space used: 72128469160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 91 (39.5 bits)