56 c3fluD_ Probab=98.11   E-value=0.00025  Score=46.85  Aligned_columns=124  Identities=20%

Q ss_pred             CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCHHHHHH
Q ss_conf             98999999999997099799952877644200136666659899998879999732688749997511010157899999
Q batch____        93 SAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIE  172 (296)
Q Consensus        93 ~~~~v~~tv~~~~~aGa~gi~iEDq~~~k~cg~~~~~~lv~~e~~~~ki~aa~~a~~~~d~~I~ARTDa~~~~gldeaI~  172 (296)
                      +.....+.++.+.+.|+.|+.+        +|+.+.-...+.+|...-++.++++..+.--+|..    ......+++++
T Consensus        22 D~~~~~~~~~~l~~~Gv~gi~~--------~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~g----v~~~~~~~~i~   89 (293)
T c3fluD_          22 HYEQLRDLIDWHIENGTDGIVA--------VGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAG----TGANNTVEAIA   89 (293)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEE--------SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE----CCCSSHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCCCEEEE--------CCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEE----CCCCCHHHHHH
T ss_conf             8899999999999779989998--------77235702179999999999999960899739996----58899999999


Q ss_pred             HHHHHHHCCCCEEEECCCC----CHHHHHHHHHHC----CCCEEEEEECCCCCCCCCHHHHHHC
Q ss_conf             9999997699799918998----999999999853----9988999507898888788899836
Q batch____       173 RAQAYVEAGAEMLFPEAIT----ELAMYRQFADAV----QVPILANITEFGATPLFTTDELRSA  228 (296)
Q Consensus       173 Ra~ay~eAGAD~ifi~~~~----~~e~~~~~~~~i----~~Pl~~~~~~~g~tp~~~~~eL~~l  228 (296)
                      +++.++++|||++.+-.+.    +.+++..+-+.+    +.|+++--.+.-....++.+.+.++
T Consensus        90 ~a~~a~~~Gad~v~~~pP~~~~~s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~~s~~~~~~L  153 (293)
T c3fluD_          90 LSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRL  153 (293)
T ss_dssp             HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCCSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf             9999985499899993887889998899999999997549989999675333677598999998