59 c1rnlA_ Probab=99.86   E-value=6.2e-21  Score=137.77  Aligned_columns=180  Identities=24%

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCC-CCCCCCC
Q ss_conf             67708998599899999999999879--89999989899999998479985874215787773100011001-1234320
Q batch____         2 QTPHILIVEDELVTRNTLKSIFEAEG--YDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELRE-QANVALM   78 (238)
Q Consensus         2 ~~~kILivdDd~~~~~~l~~~L~~~g--~~V~~a~~~~eal~~~~~~~~dlvilD~~~p~~~g~~~~~~ir~-~~~~~~i   78 (238)
                      +.+||||||||+.++.+++.+|+..+  ..|.+|.|+.+|++.+.+.+||++++|+.||+++|...+..++. .+..+++
T Consensus         1 ~pi~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~   80 (200)
T c1rnlA_           1 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV   80 (200)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             97089997499899999999998489817999978989999999871997554211111000136899974203100123


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             24556607775556664210000121342111013466677531013321122212222222222210000122333202
Q batch____        79 FLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQ  158 (238)
Q Consensus        79 ~lt~~~~~~~~~~~~~~ga~~yl~Kp~~~~~l~~~i~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (238)
                      ++++.........+...+..++..++.....+..........................                      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  138 (200)
T c1rnlA_          81 VFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL----------------------  138 (200)
T ss_dssp             EECSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHC----------------------
T ss_pred             CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------------
T ss_conf             4445310111000011222222100122222222222222222222222221111111----------------------


Q ss_pred             EECCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             2112000000001211222234289999974167888875289999999999744
Q batch____       159 YKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFE  213 (238)
Q Consensus       159 i~lt~~e~~ll~~l~~~~~~v~sr~~l~~~v~g~~~~~~~~ti~~~I~rLR~KL~  213 (238)
                       .+|++|..++.++...    .|..++.+.+     ..+++||++|+++|++||+
T Consensus       139 -~lt~re~~vl~~~~~g----~s~keIA~~L-----~iS~~TV~~h~~~i~~KL~  183 (200)
T c1rnlA_         139 -QLTPRERDILKLIAQG----LPNKMIARRL-----DITESTVKVHVKHMLKKMK  183 (200)
T ss_dssp             -CCCHHHHHHHHHHHTT----CCHHHHHHHH-----TCCHHHHHHHHHHHHHHTT
T ss_pred             -CCCCCCCCCCCCCCCC----CCHHHHHHHH-----CCCCHHHHHHHHHHHHHCC
T ss_conf             -1222111112224567----7689989886-----8870699999999999817