Phyre 2 alignment of P75783 with c2e70A_

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Job Description | P75783
Confidence | 39.17% | Date | Thu Jan 5 12:14:05 GMT 2012
Rank | 83 | Aligned Residues | 49
% Identity | 20% | Template | c2e70A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt5; | PDBTitle: solution structure of the fifth kow motif of human2 transcription elongation factor spt5
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 571 | . | . | . | . | . | . | . | . | 580 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . |  | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | N | G | M | N | T | G | D | L | V | T | I | . | . | . | . | . | G | P | L | T | G | T | V | E | R | M | S | I | R | S | V | G | V | . | R | Q | D | T | G | A | Y | H | I | I | P | W | S | S | I | T | T | F | A | N | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | N | E | L | . | I | G | Q | T | V | R | I | S | Q | G | P | Y | K | G | Y | I | G | V | V | K | D | A | T | E | S | T | A | R | V | E | L | H | S | T | C | Q | T | I | S | V | D | R | Q | R | L | T | T | V | G | S | R
Template Known Secondary structure |  | T | T | S | S | . | T | T | S |  |  |  |  |  | S | S | T | T | T | T |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 702 | . | . | . |  | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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