Phyre 2 alignment of P75783 with c1w4sA_

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Job Description | P75783
Confidence | 22.29% | Date | Thu Jan 5 12:14:05 GMT 2012
Rank | 304 | Aligned Residues | 19
% Identity | 37% | Template | c1w4sA_
PDB info | PDB header:nuclear protein | Chain: A: PDB Molecule:polybromo 1 protein; | PDBTitle: crystal structure of the proximal bah domain of polybromo
Resolution | 1.55 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 574 | . | . | . | . | . | 580 | . | . | . | . |  |  |  |  |  |  |  | . | . | . | . | . | 590 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | M | N | T | G | D | L | V | T | I | G | P | . | . | . | . | . | . | . | L | T | G | T | V | E | R | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | H | V | G | D | Y | V | Y | V | E | P | A | E | A | N | L | Q | P | H | I | V | C | I | E | R | L
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  |  |  | S | S | T | T | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 956 | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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