Phyre 2 alignment of P75783 with c3iz5U_

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Job Description | P75783
Confidence | 40.28% | Date | Thu Jan 5 12:14:05 GMT 2012
Rank | 75 | Aligned Residues | 29
% Identity | 34% | Template | c3iz5U_
PDB info | PDB header:ribosome | Chain: U: PDB Molecule:60s ribosomal protein l21 (l21e); | PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution | 5.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 572 | . | . | . | . | . | . | . | 580 | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | G | M | N | T | G | D | L | V | T | I | . | . | G | . | . | . | . | . | . | . | . | . | . | . | . | . | P | L | T | G | T | V | E | R | M | S | I | R | S | V | G | V | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | T | Y | K | V | G | E | H | V | D | V | K | V | N | G | A | V | H | K | G | M | P | H | K | F | Y | H | G | R | T | G | R | V | W | N | V | T | K | R | A | I | G | V | E
Template Known Secondary structure |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |  |  | S | S |  |  |  | G | G | G | T | T |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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