Phyre 2 alignment of P75783 with c1ssfA_

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Job Description | P75783
Confidence | 25.93% | Date | Thu Jan 5 12:14:05 GMT 2012
Rank | 166 | Aligned Residues | 42
% Identity | 12% | Template | c1ssfA_
PDB info | PDB header:cell cycle | Chain: A: PDB Molecule:transformation related protein 53 binding | PDBTitle: solution structure of the mouse 53bp1 fragment (residues2 1463-1617)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 572 | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 590 | . | . |  |  |  |  | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | G | M | N | T | G | D | L | V | T | I | G | P | L | T | . | . | . | . | . | G | T | V | E | R | M | . | . | . | . | S | I | R | S | V | G | V | R | Q | D | T | G | A | Y | H | I | I | P | W | S | S | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | P | I | P | L | D | T | E | V | T | A | L | S | E | D | E | Y | F | S | A | G | V | V | K | G | H | R | K | E | S | G | E | L | Y | Y | S | I | E | K | . | E | G | Q | R | K | W | Y | K | R | M | A | V
Template Known Secondary structure |  |  |  | S |  | S | S |  |  |  |  |  | S | S |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |  | . | . | 100 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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