Phyre 2 Results for P0AF76

Email | l.a.kelley@imperial.ac.uk
Description | P0AF76
Date | Thu Jan 5 11:25:29 GMT 2012
Unique Job ID | 7814dce8e3c264f9

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1jyoa_ |
|  | 86.1 | 15 | Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone
2 | d2plga1 |
|  | 54.5 | 16 | Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Tll0839-like
3 | d2fm8a1 |
|  | 53.3 | 10 | Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone
4 | c2l6lA_ |
|  | 34.7 | 12 | PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 24; PDBTitle: solution structure of human j-protein co-chaperone, dph4
5 | d1hdja_ |
|  | 30.8 | 26 | Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain
6 | c2ijoA_ |
|  | 25.3 | 24 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:polyprotein; PDBTitle: crystal structure of the west nile virus ns2b-ns3 protease2 complexed with bovine pancreatic trypsin inhibitor
7 | c3e90C_ |
|  | 24.8 | 24 | PDB header:hydrolase Chain: C: PDB Molecule:ns2b cofactor; PDBTitle: west nile vi rus ns2b-ns3protease in complexed with2 inhibitor naph-kkr-h
8 | d2ga5a1 |
|  | 24.8 | 20 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
9 | c2ieqC_ |
|  | 22.1 | 28 | PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein
10 | d1ry9a_ |
|  | 20.8 | 16 | Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone
11 | d1ew4a_ |
|  | 20.1 | 20 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
12 | c2v75A_ |
|  | 19.8 | 26 | PDB header:nuclear protein Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein nab2; PDBTitle: n-terminal domain of nab2
13 | d2fqla1 |
|  | 18.2 | 20 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
14 | d1et9a1 |
|  | 16.6 | 35 | Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Superantigen toxins, N-terminal domain
15 | d1wjza_ |
|  | 15.3 | 14 | Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain
16 | c3uc0B_ |
|  | 12.2 | 21 | PDB header:viral protein/immune system Chain: B: PDB Molecule:envelope protein; PDBTitle: crystal structure of domain i of the envelope glycoprotein ectodomain2 from dengue virus serotype 4 in complex with the fab fragment of the3 chimpanzee monoclonal antibody 5h2
17 | d1iwga6 |
|  | 11.7 | 16 | Fold:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Superfamily:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Family:Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
18 | d1ekga_ |
|  | 11.1 | 22 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
19 | c3kopB_ |
|  | 10.7 | 22 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution
20 | c2hqnA_ |
|  | 9.5 | 18 | PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism
21 | c3muwU_ |
| not modelled | 8.8 | 5 | PDB header:virus Chain: U: PDB Molecule:structural polyprotein; PDBTitle: pseudo-atomic structure of the e2-e1 protein shell in sindbis virus
22 | c2ochA_ |
| not modelled | 8.4 | 18 | PDB header:chaperone Chain: A: PDB Molecule:hypothetical protein dnj-12; PDBTitle: j-domain of dnj-12 from caenorhabditis elegans
23 | c3iwcD_ |
| not modelled | 8.3 | 14 | PDB header:lyase Chain: D: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with s-adenosylmethionine2 methyl ester
24 | c2iiiA_ |
| not modelled | 8.3 | 7 | PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme; PDBTitle: crystal structure of the adenosylmethionine decarboxylase (aq_254)2 from aquifex aeolicus vf5
25 | d1vlya2 |
| not modelled | 8.2 | 6 | Fold:Folate-binding domain Superfamily:Folate-binding domain Family:Aminomethyltransferase folate-binding domain
26 | c2bezC_ |
| not modelled | 7.9 | 43 | PDB header:viral protein Chain: C: PDB Molecule:e2 glycoprotein; PDBTitle: structure of a proteolitically resistant core from the2 severe acute respiratory syndrome coronavirus s2 fusion3 protein
27 | c2o37A_ |
| not modelled | 7.6 | 13 | PDB header:chaperone Chain: A: PDB Molecule:protein sis1; PDBTitle: j-domain of sis1 protein, hsp40 co-chaperone from2 saccharomyces cerevisiae.
28 | c2ys8A_ |
| not modelled | 7.5 | 11 | PDB header:protein binding Chain: A: PDB Molecule:rab-related gtp-binding protein rabj; PDBTitle: solution structure of the dnaj-like domain from human ras-2 associated protein rap1
29 | d1vr7a1 |
| not modelled | 7.4 | 14 | Fold:S-adenosylmethionine decarboxylase Superfamily:S-adenosylmethionine decarboxylase Family:Bacterial S-adenosylmethionine decarboxylase
30 | c2dn9A_ |
| not modelled | 7.3 | 21 | PDB header:apoptosis, chaperone Chain: A: PDB Molecule:dnaj homolog subfamily a member 3; PDBTitle: solution structure of j-domain from the dnaj homolog, human2 tid1 protein
31 | c3r84O_ |
| not modelled | 7.3 | 30 | PDB header:transcription Chain: O: PDB Molecule:mediator of rna polymerase ii transcription subunit 11; PDBTitle: structure of the mediator head subcomplex med11/22
32 | c1vr7A_ |
| not modelled | 7.3 | 14 | PDB header:lyase Chain: A: PDB Molecule:s-adenosylmethionine decarboxylase proenzyme; PDBTitle: crystal structure of s-adenosylmethionine decarboxylase proenzyme2 (tm0655) from thermotoga maritima at 1.2 a resolution
33 | c3lkxB_ |
| not modelled | 7.0 | 38 | PDB header:chaperone Chain: B: PDB Molecule:nascent polypeptide-associated complex subunit alpha; PDBTitle: human nac dimerization domain
34 | c1wyyB_ |
| not modelled | 6.8 | 43 | PDB header:viral protein Chain: B: PDB Molecule:e2 glycoprotein; PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein
35 | c2lgwA_ |
| not modelled | 6.7 | 19 | PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 2; PDBTitle: solution structure of the j domain of hsj1a
36 | c2jzyA_ |
| not modelled | 6.6 | 13 | PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein pcor; PDBTitle: solution structure of c-terminal effector domain of2 putative two-component-system response regulator involved3 in copper resistance from klebsiella pneumoniae
37 | d2gu3a2 |
| not modelled | 6.5 | 50 | Fold:Cystatin-like Superfamily:Cystatin/monellin Family:PepSY-like
38 | d1wf9a1 |
| not modelled | 6.2 | 16 | Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related
39 | d1yu0a1 |
| not modelled | 6.0 | 38 | Fold:Pseudo beta-prism Superfamily:Bacteriophage trimeric proteins domain Family:Mtd domain-like
40 | c2ctqA_ |
| not modelled | 6.0 | 36 | PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily c member 12; PDBTitle: solution structure of j-domain from human dnaj subfamily c2 menber 12
41 | c2ctrA_ |
| not modelled | 5.9 | 21 | PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 9; PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 9
42 | d1aiea_ |
| not modelled | 5.8 | 21 | Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain
43 | d3saka_ |
| not modelled | 5.8 | 18 | Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain
44 | d1iqoa_ |
| not modelled | 5.8 | 24 | Fold:Hypothetical protein MTH1880 Superfamily:Hypothetical protein MTH1880 Family:Hypothetical protein MTH1880
45 | d1s6la1 |
| not modelled | 5.8 | 18 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MerB N-terminal domain-like
46 | c1zldA_ |
| not modelled | 5.6 | 33 | PDB header:toxin Chain: A: PDB Molecule:ptr necrosis toxin; PDBTitle: crystal structure of a rgd-containing host-selective toxin:2 pyrenophora tritici-repentis ptr toxa
47 | c2j10B_ |
| not modelled | 5.5 | 21 | PDB header:transcription Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k
48 | c2j10D_ |
| not modelled | 5.5 | 21 | PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k
49 | c2j10A_ |
| not modelled | 5.5 | 21 | PDB header:transcription Chain: A: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k
50 | d2i3oa1 |
| not modelled | 5.3 | 10 | Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Gamma-glutamyltranspeptidase-like