Phyre 2 alignment of P0AF76 with c1pyaD_

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Job Description | P0AF76
Confidence | 3.17% | Date | Thu Jan 5 11:25:29 GMT 2012
Rank | 85 | Aligned Residues | 30
% Identity | 23% | Template | c1pyaD_
PDB info | PDB header:carboxy-lyase | Chain: D: PDB Molecule:pyruvoyl-dependent histidine decarboxylase (l- | PDBTitle: refined structure of the pyruvoyl-dependent histidine2 decarboxylase from lactobacillus 30a
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . |  |  |  |  |  | . | 30 |  | . | . | . | . | . | . | . | . | . | 40 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | T | V | P | E | Q | N | I | D | V | T | N | S | E | N | A | . | . | . | . | . | L | I | . | I | K | M | N | D | Y | G | D | L | Q | I | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | Q | G | R | V | I | G | Y | D | I | L | R | S | P | E | V | D | K | A | K | P | L | F | T | E | T | Q | W | D | G | S | E | L | P | I | Y
Template Known Secondary structure |  | T | T |  |  |  | B | T | T | T | B | S | B |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  | T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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