Phyre 2 alignment of P0AF76 with c2l6lA_

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Job Description | P0AF76
Confidence | 34.70% | Date | Thu Jan 5 11:25:29 GMT 2012
Rank | 4 | Aligned Residues | 33
% Identity | 12% | Template | c2l6lA_
PDB info | PDB header:chaperone | Chain: A: PDB Molecule:dnaj homolog subfamily c member 24; | PDBTitle: solution structure of human j-protein co-chaperone, dph4
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | G | I | S | S | V | Q | Q | E | E | Y | Y | I | V | F | G | A | L | S | L | K | S | S | L | E | D | I | L | L | E | I | T | S | L | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | V | E | Q | M | P | K | K | D | W | Y | S | I | L | G | . | A | D | P | S | A | N | I | S | D | L | K | Q | K | Y | Q | K | L | I
Template Known Secondary structure |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | T | . |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . |  | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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