89 c3fotA_ Probab=72.79   E-value=5.5  Score=17.82  Aligned_columns=194  Identities=12%

Q ss_pred             EEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEECCCCEEEECCCCC---------
Q ss_conf             49999865647999999998653211004874457899999999999857732199945897799958666---------
Q batch____       425 HVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYIN---------  495 (630)
Q Consensus       425 ~~~~~~~~~~~~l~~~r~~~~~~~~~~~~~~~~t~~~~~~ka~~~al~~~p~~n~~~~~~~~~~~~~~~~~---------  495 (630)
                      .-.+...++-.....+++..|..     ....+|++.++.-|++.+|.++-.-......-+-.+..+++..         
T Consensus       267 ~~~~~~~l~~~~t~~l~~~~k~~-----~~~g~t~~~~~~AA~~~~l~~~~~~~d~~~~~~~~~~gR~~l~~p~~~~~~~  341 (505)
T c3fotA_         267 PRCVIHKLSADESIDIVKAVKTR-----LGPGFTISHLTQAAIVLALLDHLLSDDEVFISPTSVDGRRWLREDIASNFYA  341 (505)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHH-----TCTTCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEEEECGGGBCHHHHTSCCS
T ss_pred             CEEEEEEECHHHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             50599986888999999988652-----1575579999999999998753488844898520005852347544444333


Q ss_pred             ---EEEEEECCCCEEEEEECCCCCC----CHHHHHHHHHHHHHHHHCC-------------------CCCHHHHCCCEEE
Q ss_conf             ---8999986996597463385308----9999999999999999838-------------------9888880896399
Q batch____       496 ---IGVAVDTPNGLVVPVFKDVNKK----GIIELSRELMTISKKARDG-------------------KLTAGEMQGGCFT  549 (630)
Q Consensus       496 ---i~~av~~~~gl~~pvi~~~~~~----~~~~i~~~~~~~~~~a~~~-------------------~l~~~~~~g~t~t  549 (630)
                         -...+...-|.+++++.--.+.    ++.++.+.+++-..++.+.                   ...+..-...++.
T Consensus       342 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (505)
T c3fotA_         342 MCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPL  421 (505)
T ss_dssp             CCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCE
T ss_pred             CCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
T ss_conf             44444431033113310124565558422189999999999885225752011233212244653033456765666622


Q ss_pred             EECCCCCC-CCCEEEECCCCCEEEEEECCCEEEEEEECCEEEE-----EEEEEEEEEECCCEECHHHHHHHHHHHHHHHC
Q ss_conf             96263326-2111100168865899953750368987890679-----65899999832220214899999999999862
Q batch____       550 ISSIGGLG-TTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVP-----RLMLPISLSFDHRVIDGADGARFITIINNTLS  623 (630)
Q Consensus       550 isn~g~~g-~~~~~pii~~~~~~il~~g~~~~~~~~~~~~~~~-----~~~~~~~l~~Dhr~idg~~~~~fl~~~~~~le  623 (630)
                      ++++|.+- .....---...+...+.+.......-.....+.+     +..+.|++.||-...|...+.+||+.++++|+
T Consensus       422 f~~~g~~e~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~~~~~g~L~L~~~Yn~~~~~~~~v~~~l~~~~~~L~  501 (505)
T c3fotA_         422 FISDGINERFIPHEIKQTATGENVLSVESIDFVVNQSLPYLAIRLDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEFML  501 (505)
T ss_dssp             EEEEEEGGGTSCSEEEETTTTEEEEEEEEEEEEECCCSSSCEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEHHEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf             31100100023433332334677258987302444445621899997599699999980241999999999999999999