31 c3nlcA_ Probab=99.93   E-value=1.8e-26  Score=183.57  Aligned_columns=376  Identities=16%

Q ss_pred             CEEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf             35887188988948999999999986899719999888878850331278710467865688999999998517898889
Q batch____         2 QTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQD   81 (602)
Q Consensus         2 e~~~~DViVIGgG~AGl~AA~~aa~~G~~~~V~iveK~~~~gg~s~~a~Ggi~~~~~~~d~~e~~~~d~~~~g~~l~d~~   81 (602)
                      ++.+.+|||||+|+|||+||+.++++|  ++|+|+||....||.+....+..........+...+-.-............
T Consensus        90 ~~~~~~~vVVGaG~AGL~AA~~La~~G--~~V~vlE~~~~~GGr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (534)
T c3nlcA_          90 ENLTERPIVIGFGPCGLFAGLVLAQXG--FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYS  167 (534)
T ss_dssp             TTCCCCCEEECCSHHHHHHHHHHHHTT--CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCC
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCHHCCCCCEEE
T ss_conf             566886799889689999999999769--819999788875643000245556420143344431011000002575011


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEE
Q ss_conf             99999996899999999869823115777522333478524505873787515899999999872199899968544200
Q batch____        82 VVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDI  161 (602)
Q Consensus        82 lv~~~~~~~~~~v~~L~~~Gv~f~~~~~g~~~~~~~~g~~~~r~~~~~~~~g~~~~~~l~~~~~~~~gV~i~~~~~~~~l  161 (602)
                      ..........+.++||.++|+++....++......               ...........+.....|++++.++.+.++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~g~~i~~~~~v~~~  232 (534)
T c3nlcA_         168 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGT---------------FKLVTXIEKXRATIIELGGEIRFSTRVDDL  232 (534)
T ss_dssp             CSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCH---------------HHHHHHHHHHHHHHHHTTCEEESSCCEEEE
T ss_pred             EHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC---------------CCCHHHHHHHHHHHHHCCCEEEECCEEEEC
T ss_conf             00010156789999999769983002478523132---------------220368999999998689799958786101


Q ss_pred             EEECCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC------------------CCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf             232232566578850664123440357420578633355------------------56578654575789999973993
Q batch____       162 LVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY------------------RYNTNGGIVTGDGMGMALSHGVP  223 (602)
Q Consensus       162 i~~~~~~~g~v~~~~~~g~~~~i~AkaVVlAtGG~~~~~------------------~~~t~~~~~tGdg~~~a~~aGa~  223 (602)
                      +.+++.+.+....+..     .+.|++||+|||+++++.                  ......+...++........+..
T Consensus       233 ~~~~~~~~~~~~~~~~-----~i~A~aVIlAtGg~a~~~~~~l~~~g~~~~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~  307 (534)
T c3nlcA_         233 HXEDGQITGVTLSNGE-----EIKSRHVVLAVGHSARDTFEXLHERGVYXEAKPFSVGFRIEHKQSXIDEARFGPNAGHP  307 (534)
T ss_dssp             EESSSBEEEEEETTSC-----EEECSCEEECCCTTCHHHHHHHHHTTCCCEECCEEEEEEEEEEHHHHHHHHTSTTTTCT
T ss_pred             CCCCCEEEEEEECCCE-----EEECCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCC
T ss_conf             0366402546732760-----89778799828853246787888749865565431001203431000110123334543


Q ss_pred             EECCCEEEEEECCCCCCC----------------------------CCCHHCCCCCCEEEECCCCCCCCCCCCCCHHHHH
Q ss_conf             466525799841114764----------------------------2000000247569981886431122243025677
Q batch____       224 LRDMEFVQYHPTGLPGSG----------------------------ILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPL  275 (602)
Q Consensus       224 l~~me~~q~~pt~~~~~~----------------------------~l~~~~~~~~g~~lvn~~G~rf~~~~~~~~~~~~  275 (602)
                      .......+.......+..                            ..............+...-..+............
T Consensus       308 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (534)
T c3nlcA_         308 ILGAADYKLVHHCKNGRTVYSFCXCPGGTVVAATSEEGRVVTNGXSQYSRAERNANSAIVVGISPEVDYPGDPLAGIRFQ  387 (534)
T ss_dssp             TTCSCCCCCEEECTTSCEEEEEEEEEEEEEEECCCSTTCCCEEEECCTTCCSSEEEEEEEEEECBTTTBCCSTTHHHHHH
T ss_pred             CCCCCCCCEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHH
T ss_conf             34443210110246787004652167651232014565310033211111222334413663036743353100163101


Q ss_pred             HHHHCCCCCCCCCC--HHHHHHHHHHHHCCCCCCCCCCCHHH------HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             76310122312220--13288999998638622566521023------23189999999989999999986079887766
Q batch____       276 GEPKNKYMELGPRD--KVSQAFWHEWRKGNTISTPRGDVVYL------DLRHLGEKKLHERLPFICELAKAYVGVDPVKE  347 (602)
Q Consensus       276 ~~~~~~~~~l~~~d--~v~~ai~~e~~~g~~~~~~~~~~~~~------d~~~~~~~~l~~~~~~~~~~~~~~~g~d~~~~  347 (602)
                      ..............  .....+..................+.      +++...++.....+..........        
T Consensus       388 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~--------  459 (534)
T c3nlcA_         388 RELESNAYKLGGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRK--------  459 (534)
T ss_dssp             HHHHHHHHHHTTSSSCEEEEEHHHHHHTCTTCCCCSSCCCCSSCEEECCGGGTSCHHHHHHHHHHHHHHHTT--------
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCC--------
T ss_conf             466667764167775418989988735552002221103558572234444556899999998734421221--------


Q ss_pred             EEEEECCCEECCCCEEECCCCE-----------ECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0573112022028474568834-----------03897786000254687898732026899999999999999998753
Q batch____       348 PIPVRPTAHYTMGGIETDQNCE-----------TRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAA  416 (602)
Q Consensus       348 ~i~v~p~~~~t~GGI~vD~~~~-----------T~IpGLYAaGe~a~~~~hGa~rlgg~sl~~~~v~G~~Ag~~aa~~~~  416 (602)
                       ++-....++++||+.+|....           |+|||||+|||.++         .+.++..|++.|++|++.+++++.
T Consensus       460 -~p~~~~~~~~~gGv~~~~~~~~~~~~~~~~~~t~I~GLY~aGe~ag---------~~gGi~~Aa~sG~~aA~~i~~~l~  529 (534)
T c3nlcA_         460 -IKGFASEDGLLTGVETRTSSPVCIKRGKDFQSVNLKGFYPAGEGAG---------YAGGILSAGIDGIKVAEAVARDIV  529 (534)
T ss_dssp             -STTTTCTTCEEEEEECCSSCSEECCCTTTTSCTTCBTEEECHHHHT---------SCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCC---------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -2444567467535786135761341077631522897599131378---------720379999999999999999873


Q ss_pred             C
Q ss_conf             0
Q batch____       417 T  417 (602)
Q Consensus       417 ~  417 (602)
                      +
T Consensus       530 ~  530 (534)
T c3nlcA_         530 A  530 (534)
T ss_dssp             H
T ss_pred             C
T ss_conf             2