Email l.a.kelley@imperial.ac.uk Description P46887 Date Thu Jan 5 12:04:35 GMT 2012 Unique Job ID 77bb45fe98ea8e29

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1w2za2 35.9 10 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 2 d1sgla_ 35.7 19 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 3 c2xigA_ 25.8 13 PDB header:transcription Chain: A: PDB Molecule:ferric uptake regulation protein; PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites 4 c3ri6A_ 24.4 22 PDB header:transferase Chain: A: PDB Molecule:o-acetylhomoserine sulfhydrylase; PDBTitle: a novel mechanism of sulfur transfer catalyzed by o-acetylhomoserine2 sulfhydrylase in methionine biosynthetic pathway of wolinella3 succinogenes 5 d1vqza1 24.2 16 Fold:SufE/NifU Superfamily:SufE/NifU Family:SP1160 C-terminal domain-like 6 c2l9fA_ 22.1 20 PDB header:transferase Chain: A: PDB Molecule:cale8; PDBTitle: nmr solution structure of meacp 7 c3c1dA_ 21.8 10 PDB header:recombination, dna binding protein Chain: A: PDB Molecule:regulatory protein recx; PDBTitle: x-ray crystal structure of recx 8 d2p6ra1 21.6 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 9 c2o03A_ 19.2 14 PDB header:gene regulation Chain: A: PDB Molecule:probable zinc uptake regulation protein furb; PDBTitle: crystal structure of furb from m. tuberculosis- a zinc uptake2 regulator 10 c2kw0A_ 18.4 23 PDB header:oxidoreductase Chain: A: PDB Molecule:ccmh protein; PDBTitle: solution structure of n-terminal domain of ccmh from escherichia.coli 11 c3d3zA_ 17.9 15 PDB header:hydrolase Chain: A: PDB Molecule:actibind; PDBTitle: crystal structure of actibind a t2 rnase 12 c3gkxB_ 17.7 30 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative arsc family related protein; PDBTitle: crystal structure of putative arsc family related protein from2 bacteroides fragilis 13 d2a2pa1 17.7 28 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Selenoprotein W-related 14 c3c18B_ 17.0 22 PDB header:transferase Chain: B: PDB Molecule:nucleotidyltransferase-like protein; PDBTitle: crystal structure of nucleotidyltransferase-like protein2 (zp_00538802.1) from exiguobacterium sibiricum 255-15 at 1.90 a3 resolution 15 d1z3ea1 17.0 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 16 c3l78A_ 16.9 6 PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 17 d1bola_ 16.5 31 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 18 c3r1fO_ 15.7 35 PDB header:transcription Chain: O: PDB Molecule:esx-1 secretion-associated regulator espr; PDBTitle: crystal structure of a key regulator of virulence in mycobacterium2 tuberculosis 19 c1ksiA_ 15.6 9 PDB header:oxidoreductase Chain: A: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of a eukaryotic (pea seedling) copper-containing2 amine oxidase at 2.2a resolution 20 d1dv5a_ 15.5 14 Fold:Acyl carrier protein-like Superfamily:ACP-like Family:apo-D-alanyl carrier protein 21 c2kokA_ not modelled 15.3 10 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: solution structure of an arsenate reductase (arsc) related protein2 from brucella melitensis. seattle structural genomics center for3 infectious disease target braba.00007.a. 22 d1qasa1 not modelled 14.8 32 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 23 d1rw1a_ not modelled 14.7 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 24 d1pixa2 not modelled 14.6 18 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 25 c3dfgA_ not modelled 14.6 29 PDB header:recombination Chain: A: PDB Molecule:regulatory protein recx; PDBTitle: crystal structure of recx: a potent inhibitor protein of2 reca from xanthomonas campestris 26 d1rqta_ not modelled 13.7 21 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain 27 c1rqtB_ not modelled 13.7 21 PDB header:ribosome Chain: B: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: nmr structure of dimeric n-terminal domain of ribosomal2 protein l7 from e.coli 28 c1rqtA_ not modelled 13.7 21 PDB header:ribosome Chain: A: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: nmr structure of dimeric n-terminal domain of ribosomal2 protein l7 from e.coli 29 d1iyba_ not modelled 13.2 25 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 30 c3d5lA_ not modelled 13.2 18 PDB header:signaling protein Chain: A: PDB Molecule:regulatory protein recx; PDBTitle: crystal structure of regulatory protein recx 31 d3elna1 not modelled 12.0 29 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Cysteine dioxygenase type I 32 c3ffhA_ not modelled 12.0 16 PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262. 33 c2hl7A_ not modelled 11.2 13 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccmh; PDBTitle: crystal structure of the periplasmic domain of ccmh from pseudomonas2 aeruginosa 34 c3fz4A_ not modelled 11.2 16 PDB header:oxidoreductase Chain: A: PDB Molecule:putative arsenate reductase; PDBTitle: the crystal structure of a possible arsenate reductase from2 streptococcus mutans ua159 35 d1y4ia1 not modelled 11.0 14 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 36 c2pqxA_ not modelled 11.0 19 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease i; PDBTitle: e. coli rnase 1 (in vivo folded) 37 d1c7ga_ not modelled 10.8 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Beta-eliminating lyases 38 d1dixa_ not modelled 10.7 26 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 39 c3bv8A_ not modelled 10.6 27 PDB header:transferase Chain: A: PDB Molecule:tetrahydrodipicolinate acetyltransferase; PDBTitle: crystal structure of the n-terminal domain of tetrahydrodipicolinate2 acetyltransferase from staphylococcus aureus 40 d1ucda_ not modelled 10.5 21 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 41 c2dbgA_ not modelled 10.4 17 PDB header:immune system Chain: A: PDB Molecule:myeloid cell nuclear differentiation antigen; PDBTitle: solution structure of the pyrin (paad-dapin) domain in2 human myeloid cell nuclear differentiation antigen 42 d1tpla_ not modelled 10.4 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Beta-eliminating lyases 43 c3s2xB_ not modelled 10.3 38 PDB header:transferase Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha; PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain 44 d1bw6a_ not modelled 10.3 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 45 d1y74b1 not modelled 9.8 35 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 46 d1kkca2 not modelled 9.8 35 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 47 d2ctza1 not modelled 9.6 20 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 48 d1iooa_ not modelled 9.3 31 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 49 c2fcdA_ not modelled 9.3 17 PDB header:cell cycle Chain: A: PDB Molecule:myosin light chain 1; PDBTitle: solution structure of n-lobe myosin light chain from2 saccharomices cerevisiae 50 d1wuua2 not modelled 9.1 21 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Galactokinase 51 d1tp6a_ not modelled 9.1 19 Fold:Cystatin-like Superfamily:NTF2-like Family:PA1314-like 52 d1dt0a2 not modelled 9.0 37 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 53 d1qn2a_ not modelled 8.8 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 54 d2nyba2 not modelled 8.5 39 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 55 d1jy5a_ not modelled 8.3 13 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 56 c3ee4A_ not modelled 8.3 10 PDB header:oxidoreductase Chain: A: PDB Molecule:probable ribonucleoside-diphosphate reductase; PDBTitle: r2-like ligand binding mn/fe oxidase from m. tuberculosis 57 c1vd3A_ not modelled 7.9 35 PDB header:hydrolase Chain: A: PDB Molecule:rnase ngr3; PDBTitle: ribonuclease nt in complex with 2'-ump 58 c3r24A_ not modelled 7.8 20 PDB header:transferase, viral protein Chain: A: PDB Molecule:2'-o-methyl transferase; PDBTitle: crystal structure of nsp10/nsp16 complex of sars coronavirus" if2 possible 59 c1fm6V_ not modelled 7.8 20 PDB header:transcription Chain: V: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and rosiglitazone and co-activator peptides. 60 c2hfpB_ not modelled 7.7 23 PDB header:transcription Chain: B: PDB Molecule:src peptide fragment; PDBTitle: crystal structure of ppar gamma with n-sulfonyl-2-indole2 carboxamide ligands 61 c3mwmA_ not modelled 7.7 18 PDB header:transcription Chain: A: PDB Molecule:putative metal uptake regulation protein; PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur 62 c3kmgE_ not modelled 7.6 20 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator-1; PDBTitle: the x-ray crystal structure of ppar-gamma in complex with an indole2 derivative modulator, gsk538, and an src-1 peptide 63 d1kfia3 not modelled 7.6 15 Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains 64 c2f9yB_ not modelled 7.6 27 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl transferase subunit PDBTitle: the crystal structure of the carboxyltransferase subunit of acc from2 escherichia coli 65 d2f9yb1 not modelled 7.6 27 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Biotin dependent carboxylase carboxyltransferase domain 66 c1fm9E_ not modelled 7.6 23 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and gi262570 and co-activator peptides. 67 c1fm6E_ not modelled 7.6 23 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.1 angstrom resolution crystal structure of the2 heterodimer of the human rxralpha and ppargamma ligand3 binding domains respectively bound with 9-cis retinoic4 acid and rosiglitazone and co-activator peptides. 68 c1k74E_ not modelled 7.6 23 PDB header:transcription Chain: E: PDB Molecule:steroid receptor coactivator; PDBTitle: the 2.3 angstrom resolution crystal structure of the2 heterodimer of the human ppargamma and rxralpha ligand3 binding domains respectively bound with gw409544 and 9-cis4 retinoic acid and co-activator peptides. 69 c3ingA_ not modelled 7.5 24 PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution 70 d1ma1a2 not modelled 7.3 33 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 71 c1f93H_ not modelled 7.3 37 PDB header:transcription Chain: H: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: crystal structure of a complex between the dimerization2 domain of hnf-1 alpha and the coactivator dcoh 72 d1idsa2 not modelled 7.2 37 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 73 c3ff5B_ not modelled 7.1 28 PDB header:protein transport Chain: B: PDB Molecule:peroxisomal biogenesis factor 14; PDBTitle: crystal structure of the conserved n-terminal domain of the2 peroxisomal matrix-protein-import receptor, pex14p 74 c3e3vA_ not modelled 7.1 21 PDB header:recombination Chain: A: PDB Molecule:regulatory protein recx; PDBTitle: crystal structure of recx from lactobacillus salivarius 75 c3s93B_ not modelled 7.1 17 PDB header:transcription Chain: B: PDB Molecule:tudor domain-containing protein 5; PDBTitle: crystal structure of conserved motif in tdrd5 76 c1f93G_ not modelled 7.1 37 PDB header:transcription Chain: G: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: crystal structure of a complex between the dimerization2 domain of hnf-1 alpha and the coactivator dcoh 77 d1ix9a2 not modelled 7.0 46 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 78 c1g39C_ not modelled 6.8 37 PDB header:transcription Chain: C: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: wild-type hnf-1alpha dimerization domain 79 d1gv3a2 not modelled 6.7 23 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 80 c2e7uA_ not modelled 6.6 15 PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 81 c1gv3B_ not modelled 6.6 20 PDB header:manganese superoxide dismutase Chain: B: PDB Molecule:manganese superoxide dismutase; PDBTitle: the 2.0 angstrom resolution structure of the catalytic2 portion of a cyanobacterial membrane-bound manganese3 superoxide dismutase 82 d1uera2 not modelled 6.4 33 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 83 c3f2hA_ not modelled 6.4 21 PDB header:lyase Chain: A: PDB Molecule:alkylmercury lyase; PDBTitle: crystal structure of the mercury-bound form of merb mutant2 c160s, the organomercurial lyase involved in a bacterial3 mercury resistance system 84 c2w85A_ not modelled 6.3 28 PDB header:protein transport Chain: A: PDB Molecule:peroxisomal membrane anchor protein pex14; PDBTitle: structure of pex14 in compex with pex19 85 d1tyya_ not modelled 6.3 20 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:Ribokinase-like 86 d2hrca1 not modelled 6.3 15 Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase 87 d1qgna_ not modelled 6.2 24 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 88 d1vefa1 not modelled 6.2 17 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 89 c2k6sB_ not modelled 6.2 21 PDB header:protein transport Chain: B: PDB Molecule:rab11fip2 protein; PDBTitle: structure of rab11-fip2 c-terminal coiled-coil domain 90 d1my6a2 not modelled 6.2 31 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 91 d1e5ea_ not modelled 6.2 24 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 92 c2zsmA_ not modelled 6.1 15 PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form 93 d1mnga2 not modelled 5.9 30 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 94 d2coba1 not modelled 5.9 43 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Psq domain 95 c2k5eA_ not modelled 5.8 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of putative uncharacterized protein2 gsu1278 from methanocaldococcus jannaschii, northeast3 structural genomics consortium (nesg) target gsr195 96 d1vdla_ not modelled 5.8 33 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 97 d2p4ka2 not modelled 5.8 37 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 98 d1p7ga2 not modelled 5.7 20 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 99 c2prgC_ not modelled 5.6 23 PDB header:complex (thiazolidinedione/receptor) Chain: C: PDB Molecule:nuclear receptor coactivator src-1; PDBTitle: ligand-binding domain of the human peroxisome proliferator2 activated receptor gamma