Job Description P37182 Confidence 41.73% Date Thu Jan 5 11:54:57 GMT 2012 Rank 113 Aligned Residues 123 % Identity 23% Template c3f46A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methenyltetrahydromethanopterin hydrogenase; PDBTitle: the crystal structure of c176a mutated [fe]-hydrogenase (hmd)2 holoenzyme from methanocaldococcus jannaschii Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																						.	.	.																																																								.	.
Query SS confidence																						.	.	.																																																								.	.
Query Sequence		M	R	I	L	V	L	G	V	G	N	I	L	L	T	D	E	A	I	G	V	.	.	.	R	I	V	E	A	L	E	Q	R	Y	I	L	P	D	Y	V	E	I	L	D	G	G	T	A	G	M	E	L	L	G	D	M	A	N	R	D	H	L	I	I	A	D	A	I	V	S	K	K	N	A	P	G	T	M	M	.	.
Query Conservation																						.	.	.																																																								.	.
Alig confidence													.									.	.	.																																														.	.									.	.
Template Conservation													.																																																									.	.
Template Sequence		M	K	I	A	I	L	G	A	G	C	Y	.	R	T	H	A	A	A	G	I	T	N	F	M	R	A	C	E	V	A	K	E	V	G	K	P	E	I	A	L	T	H	S	S	I	T	Y	G	A	E	L	L	H	L	V	P	D	V	K	E	V	I	V	S	D	P	C	F	.	.	A	E	E	P	G	L	V	V	I	D
Template Known Secondary structure												S	.																						T		G	G	G	G	G																T	T									G	G	G	.	.	G	S	S	S
Template Predicted Secondary structure													.																																																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		I	L	R	D	E	E	V	P	.	A	L	F	T	N	K	I	S	P	H	Q	L	G	L	A	D	V	L	S	A	L	R	F	T	G	E	F	P	K	K	L	T	L	V	G	V	I	P	E	S	L	E	P
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		E	F	D	P	K	E	V	M	E	A	H	L	S	G	N	P	E	S	I	M	P	K	I	R	E	V	V	K	A	K	A	K	E	L	P	K	P	P	K	A	C	I	H	L	V	H	P	E	D	V	G	L
Template Known Secondary structure			S											T	T		G	G	G	T													T	T	S			T	T	T					S	S		G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions