192 c1vmaA_ Probab=96.30   E-value=0.047  Score=36.15  Aligned_columns=129  Identities=18%

Q ss_pred             CCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             57153568956775168655368999986055886652789899767730785474220899840377774888999998
Q batch____       385 NLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEV  464 (561)
Q Consensus       385 ~isl~i~~G~~~aIvG~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~v~Q~~~lf~~Ti~eNi~~~~~~~~~~~~~~~~  464 (561)
                      ..+..-.++..++++||+|+||||.+.=|+..+.-..-++.+-+.|.|=+                     ..-+++...
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~---------------------gA~eQL~~~  142 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA---------------------AAIEQLKIW  142 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH---------------------HHHHHHHHH
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH---------------------HHHHHHHHH
T ss_conf             00235789669999806887602489999999996799489997587686---------------------479999999


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCHHHHHHHHHHHHHHC------CCCE
Q ss_conf             9976976788510120354214897889999999998429989999397-44889899999999999860------8986
Q batch____       465 LHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDET-TSHLEEQEAIRLLRLVREKL------PTSG  537 (561)
Q Consensus       465 l~~~~l~~~~~~l~~~~~~g~~LSgGQkQRl~laRal~~~~~iliLDE~-ts~lD~~~~~~i~~~l~~~~------~~~t  537 (561)
                      .+..++.        +...+..=.-.+--|=++..+..++.++++.|.| -|.-|..--+++-+......      ++.+
T Consensus       143 a~~~~v~--------~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~  214 (294)
T c1vmaA_         143 GERVGAT--------VISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHET  214 (294)
T ss_dssp             HHHHTCE--------EECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEE
T ss_pred             HHHHCCE--------EEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             9761982--------89748836989999999999997799899981888987857999999999999630356688539


Q ss_pred             EEEEC
Q ss_conf             99972
Q batch____       538 VIMVT  542 (561)
Q Consensus       538 vi~it  542 (561)
                      +++++
T Consensus       215 ~LVl~  219 (294)
T c1vmaA_         215 LLVID  219 (294)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99811