199 c1in8A_ Probab=96.25   E-value=0.034  Score=37.44  Aligned_columns=91  Identities=32%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             68956775168655368999986055886652789899767730785474220899840377774888999998997697
Q batch____       391 SPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGL  470 (561)
Q Consensus       391 ~~G~~~aIvG~sGsGKSTLl~~l~g~~~~~~G~i~~~~~~~~v~Q~~~lf~~Ti~eNi~~~~~~~~~~~~~~~~l~~~~l  470 (561)
                      ++-..+.+.||.|+||||+++.++...         +....++.-........+....                      
T Consensus        33 ~~~~~ill~GppGtGKT~la~~ia~~l---------~~~~~~i~~~~~~~~~~~~~~~----------------------   81 (298)
T c1in8A_          33 EVLDHVLLAGPPGLGKTTLAHIIASEL---------QTNIHVTSGPVLVKQGDMAAIL----------------------   81 (298)
T ss_dssp             CCCCCEEEESSTTSSHHHHHHHHHHHH---------TCCEEEEETTTCCSHHHHHHHH----------------------
T ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHC---------CCCEEEEECCCCCCCHHHHHHH----------------------
T ss_conf             888857998698898889999999970---------9979999415533201245668----------------------


Q ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             678851012035421489788999999999842998999939744889899999999999860898699972
Q batch____       471 GKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVT  542 (561)
Q Consensus       471 ~~~~~~l~~~~~~g~~LSgGQkQRl~laRal~~~~~iliLDE~ts~lD~~~~~~i~~~l~~~~~~~tvi~it  542 (561)
                                                   .-+.++.++++||. ..++.+..+.+...+.+...+....++.
T Consensus        82 -----------------------------~~~~~~~il~~dei-~~l~~~~~~~l~~~l~~~~~~~~~~~~~  123 (298)
T c1in8A_          82 -----------------------------TSLERGDVLFIDEI-HRLNKAVEELLYSAIEDFQIDIQPFTLV  123 (298)
T ss_dssp             -----------------------------HTCCTTCEEEEETG-GGCCHHHHHHHHHHHHHSCCCCCCCEEE
T ss_pred             -----------------------------HHHCCCCEEEEEEH-HHCCHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf             -----------------------------85137998999423-6769899999999970553344406652