Phyre 2 alignment of P31826 with c3qq5A_

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Job Description | P31826
Confidence | 94.52% | Date | Thu Jan 5 11:48:49 GMT 2012
Rank | 409 | Aligned Residues | 40
% Identity | 13% | Template | c3qq5A_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:small gtp-binding protein; | PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
Resolution | 2.99 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 388 | . | 390 | . | . | . | . | . |  |  | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | H | V | S | P | G | K | W | . | . | L | L | L | K | G | Y | S | G | A | G | K | T | T | L | L | K | T | L | S | H | C | W | P | W | F | K | G | D | I | S | S | P | A
Query Conservation |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | T | M | R | L | G | F | R | R | Y | I | V | V | A | G | R | R | N | V | G | K | S | S | F | M | N | A | L | V | G | . | T | D | P | V | Y | K | S | M | E | L | H | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  | S | T | T | T | T | T | T | T | T | S | S |  |  | . |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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