Phyre 2 alignment of P76052 with d1a9xa2

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Job Description | P76052
Confidence | 17.26% | Date | Thu Jan 5 12:17:52 GMT 2012
Rank | 87 | Aligned Residues | 40
% Identity | 25% | Template | d1a9xa2
SCOP info | Methylglyoxal synthase-like | Methylglyoxal synthase-like | Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | A | D | R | Q | R | Y | T | D | I | A | D | Q | I | W | D | H | P | E | T | R | F | E | E | F | W | S | A | E | H | L | A | S | A | L | E | S | A | G | F | T | V | T | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | G | D | K | E | R | V | V | D | L | A | A | K | L | L | K | Q | . | . | . | . | G | F | E | L | D | A | T | H | G | T | A | I | V | L | G | E | A | G | I | N | P | R | L
Template Known Secondary structure |  | G | G | G | G | T | T |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 951 | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . |  |  |  |  | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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