Phyre 2 Results for P76052

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Email | l.a.kelley@imperial.ac.uk
Description | P76052
Date | Thu Jan 5 12:17:52 GMT 2012
Unique Job ID | 7782c8e281d4d58c

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c3ramC_
Top template information
PDB header:hydrolase Chain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra
Confidence and coverage
Confidence: | 100.0% | Coverage: | 79%
381 residues ( 79% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | Q | E | I | Y | R | F | I | D | D | A | I | E | A | D | R | Q | R | Y | T | D | I | A | D | Q | I | W | D | H | P | E | T | R | F | E | E | F | W | S | A | E | H | L | A | S | A | L | E | S | A | G | F | T | V | T | R | N | V | G | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | I | P | N | A | F | I | A | S | F | G | Q | G | K | P | V | I | A | L | L | G | E | Y | D | A | L | A | G | L | S | Q | Q | A | G | C | A | Q | P | T | S | V | T | P | G | E | N | G | H | G | C | G | H | N | L | L | G | T | A | A | F | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | A | A | I | A | V | K | K | W | L | E | Q | Y | G | Q | G | G | T | V | R | F | Y | G | C | P | G | E | E | G | G | S | G | K | T | F | M | V | R | E | G | V | F | D | D | V | D | A | A | L | T | W | H | P | E | A | F | A | G | M | F | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | T | R | T | L | A | N | I | Q | A | S | W | R | F | K | G | I | A | A | H | A | A | N | S | P | H | L | G | R | S | A | L | D | A | V | T | L | M | T | T | G | T | N | F | L | N | E | H | I | I | E | K | A | R | V | H | Y | A | I | T | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | S | G | G | I | S | P | N | V | V | Q | A | Q | A | E | V | L | Y | L | I | R | A | P | E | M | T | D | V | Q | H | I | Y | D | R | V | A | K | I | A | E | G | A | A | L | M | T | E | T | T | V | E | C | R | F | D | K | A | C | S | S | Y
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | L | P | N | R | T | L | E | N | A | M | Y | Q | A | L | S | H | F | G | T | P | E | W | N | S | E | E | L | A | F | A | K | Q | I | Q | A | T | L | T | S | N | D | R | Q | N | S | L | N | N | I | A | A | T | G | G | E | N | G | K | V | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | A | L | R | H | R | E | T | V | L | A | N | E | V | A | P | Y | A | A | T | D | N | V | L | A | A | S | T | D | V | G | D | V | S | W | K | L | P | V | A | Q | C | F | S | P | C | F | A | V | G | T | P | L | H | T | W | Q | L | V | S | Q
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | G | R | T | S | I | A | H | K | G | M | L | L | A | A | K | T | M | A | A | T | T | V | N | L | F | L | D | S | G | L | L | Q | E | C | Q | Q | E | H | Q | Q | V | T | D | T | Q | P | Y | H | C | P | I | P | K | N | V | T | P | S | P | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | .
Sequence |  | K
Secondary structure |  |
SS confidence |  |
Disorder |  | ?
Disorder confidence |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c3ramC_ |

### PDB 3ram chain C

Region: 4 - 461
Aligned: 381
Modelled: 385
Confidence: 100.0%
Identity: 31%
PDB header:hydrolase
Chain: C: PDB Molecule:hmra protein;
PDBTitle: crystal structure of hmra

Phyre2
2 |
| c3io1B_ |

### PDB 3io1 chain B

Region: 7 - 447
Aligned: 366
Modelled: 356
Confidence: 100.0%
Identity: 20%
PDB header:hydrolase
Chain: B: PDB Molecule:aminobenzoyl-glutamate utilization protein;
PDBTitle: crystal structure of aminobenzoyl-glutamate utilization2 protein from klebsiella pneumoniae

Phyre2
3 |
| c1ysjB_ |

### PDB 1ysj chain B

Region: 13 - 447
Aligned: 352
Modelled: 375
Confidence: 100.0%
Identity: 21%
PDB header:hydrolase
Chain: B: PDB Molecule:protein yxep;
PDBTitle: crystal structure of bacillus subtilis yxep protein (apc1829), a2 dinuclear metal binding peptidase from m20 family

Phyre2
4 |
| c2q43A_ |

### PDB 2q43 chain A

Region: 9 - 448
Aligned: 363
Modelled: 383
Confidence: 100.0%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:iaa-amino acid hydrolase ilr1-like 2;
PDBTitle: ensemble refinement of the protein crystal structure of iaa-aminoacid2 hydrolase from arabidopsis thaliana gene at5g56660

Phyre2
5 |
| c3pfoB_ |

### PDB 3pfo chain B

Region: 2 - 444
Aligned: 374
Modelled: 387
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: B: PDB Molecule:putative acetylornithine deacetylase;
PDBTitle: crystal structure of a putative acetylornithine deacetylase (rpa2325)2 from rhodopseudomonas palustris cga009 at 1.90 a resolution

Phyre2
6 |
| d1xmba1 |

### PDB 1xmb chain A domain 1

Region: 9 - 449
Aligned: 264
Modelled: 275
Confidence: 100.0%
Identity: 25%
Fold: Phosphorylase/hydrolase-like
Superfamily: Zn-dependent exopeptidases
Family: Bacterial dinuclear zinc exopeptidases

Phyre2
7 |
| d1ysja1 |

### PDB 1ysj chain A domain 1

Region: 14 - 446
Aligned: 254
Modelled: 267
Confidence: 100.0%
Identity: 23%
Fold: Phosphorylase/hydrolase-like
Superfamily: Zn-dependent exopeptidases
Family: Bacterial dinuclear zinc exopeptidases

Phyre2
8 |
| c1cg2D_ |

### PDB 1cg2 chain D

Region: 2 - 444
Aligned: 372
Modelled: 380
Confidence: 100.0%
Identity: 17%
PDB header:metallocarboxypeptidase
Chain: D: PDB Molecule:carboxypeptidase g2;
PDBTitle: carboxypeptidase g2

Phyre2
9 |
| c3ic1A_ |

### PDB 3ic1 chain A

Region: 16 - 446
Aligned: 356
Modelled: 375
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase2 from haemophilus influenzae

Phyre2
10 |
| c3gb0A_ |

### PDB 3gb0 chain A

Region: 15 - 446
Aligned: 355
Modelled: 360
Confidence: 100.0%
Identity: 13%
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase t;
PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution

Phyre2
11 |
| c2rb7A_ |

### PDB 2rb7 chain A

Region: 14 - 444
Aligned: 344
Modelled: 359
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase, m20/m25/m40 family;
PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution

Phyre2
12 |
| c1vgyB_ |

### PDB 1vgy chain B

Region: 16 - 445
Aligned: 361
Modelled: 373
Confidence: 100.0%
Identity: 16%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of succinyl diaminopimelate desuccinylase

Phyre2
13 |
| c3dljB_ |

### PDB 3dlj chain B

Region: 4 - 444
Aligned: 379
Modelled: 385
Confidence: 100.0%
Identity: 13%
PDB header:hydrolase
Chain: B: PDB Molecule:beta-ala-his dipeptidase;
PDBTitle: crystal structure of human carnosine dipeptidase 1

Phyre2
14 |
| c2zogA_ |

### PDB 2zog chain A

Region: 1 - 444
Aligned: 382
Modelled: 389
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:cytosolic non-specific dipeptidase;
PDBTitle: crystal structure of mouse carnosinase cn2 complexed with zn and2 bestatin

Phyre2
15 |
| c2v8gD_ |

### PDB 2v8g chain D

Region: 7 - 456
Aligned: 359
Modelled: 371
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: D: PDB Molecule:beta-alanine synthase;
PDBTitle: crystal structure of beta-alanine synthase from2 saccharomyces kluyveri in complex with the product beta-3 alanine

Phyre2
16 |
| c3rzaA_ |

### PDB 3rza chain A

Region: 15 - 447
Aligned: 356
Modelled: 365
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:tripeptidase;
PDBTitle: crystal structure of a tripeptidase (sav1512) from staphylococcus2 aureus subsp. aureus mu50 at 2.10 a resolution

Phyre2
17 |
| c2imoA_ |

### PDB 2imo chain A

Region: 12 - 444
Aligned: 346
Modelled: 355
Confidence: 100.0%
Identity: 14%
PDB header:hydrolase
Chain: A: PDB Molecule:allantoate amidohydrolase;
PDBTitle: crystal structure of allantoate amidohydrolase from escherichia coli2 at ph 4.6

Phyre2
18 |
| c3n5fB_ |

### PDB 3n5f chain B

Region: 15 - 446
Aligned: 345
Modelled: 354
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: B: PDB Molecule:n-carbamoyl-l-amino acid hydrolase;
PDBTitle: crystal structure of l-n-carbamoylase from geobacillus2 stearothermophilus cect43

Phyre2
19 |
| c2pokB_ |

### PDB 2pok chain B

Region: 1 - 441
Aligned: 378
Modelled: 386
Confidence: 100.0%
Identity: 12%
PDB header:hydrolase
Chain: B: PDB Molecule:peptidase, m20/m25/m40 family;
PDBTitle: crystal structure of a m20 family metallo peptidase from streptococcus2 pneumoniae

Phyre2
20 |
| c3tx8A_ |

### PDB 3tx8 chain A

Region: 17 - 443
Aligned: 348
Modelled: 365
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase;
PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3ramC_ |
|  | 100.0 | 31 | PDB header:hydrolase Chain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra
2 | c3io1B_ |
|  | 100.0 | 20 | PDB header:hydrolase Chain: B: PDB Molecule:aminobenzoyl-glutamate utilization protein; PDBTitle: crystal structure of aminobenzoyl-glutamate utilization2 protein from klebsiella pneumoniae
3 | c1ysjB_ |
|  | 100.0 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:protein yxep; PDBTitle: crystal structure of bacillus subtilis yxep protein (apc1829), a2 dinuclear metal binding peptidase from m20 family
4 | c2q43A_ |
|  | 100.0 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:iaa-amino acid hydrolase ilr1-like 2; PDBTitle: ensemble refinement of the protein crystal structure of iaa-aminoacid2 hydrolase from arabidopsis thaliana gene at5g56660
5 | c3pfoB_ |
|  | 100.0 | 15 | PDB header:hydrolase Chain: B: PDB Molecule:putative acetylornithine deacetylase; PDBTitle: crystal structure of a putative acetylornithine deacetylase (rpa2325)2 from rhodopseudomonas palustris cga009 at 1.90 a resolution
6 | d1xmba1 |
|  | 100.0 | 25 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
7 | d1ysja1 |
|  | 100.0 | 23 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
8 | c1cg2D_ |
|  | 100.0 | 17 | PDB header:metallocarboxypeptidase Chain: D: PDB Molecule:carboxypeptidase g2; PDBTitle: carboxypeptidase g2
9 | c3ic1A_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase2 from haemophilus influenzae
10 | c3gb0A_ |
|  | 100.0 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution
11 | c2rb7A_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution
12 | c1vgyB_ |
|  | 100.0 | 16 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of succinyl diaminopimelate desuccinylase
13 | c3dljB_ |
|  | 100.0 | 13 | PDB header:hydrolase Chain: B: PDB Molecule:beta-ala-his dipeptidase; PDBTitle: crystal structure of human carnosine dipeptidase 1
14 | c2zogA_ |
|  | 100.0 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:cytosolic non-specific dipeptidase; PDBTitle: crystal structure of mouse carnosinase cn2 complexed with zn and2 bestatin
15 | c2v8gD_ |
|  | 100.0 | 15 | PDB header:hydrolase Chain: D: PDB Molecule:beta-alanine synthase; PDBTitle: crystal structure of beta-alanine synthase from2 saccharomyces kluyveri in complex with the product beta-3 alanine
16 | c3rzaA_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:tripeptidase; PDBTitle: crystal structure of a tripeptidase (sav1512) from staphylococcus2 aureus subsp. aureus mu50 at 2.10 a resolution
17 | c2imoA_ |
|  | 100.0 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:allantoate amidohydrolase; PDBTitle: crystal structure of allantoate amidohydrolase from escherichia coli2 at ph 4.6
18 | c3n5fB_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:n-carbamoyl-l-amino acid hydrolase; PDBTitle: crystal structure of l-n-carbamoylase from geobacillus2 stearothermophilus cect43
19 | c2pokB_ |
|  | 100.0 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of a m20 family metallo peptidase from streptococcus2 pneumoniae
20 | c3tx8A_ |
|  | 100.0 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution
21 | c3ifeA_ |
| not modelled | 100.0 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'.
22 | c1lfwA_ |
| not modelled | 100.0 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:pepv; PDBTitle: crystal structure of pepv
23 | c3pfeA_ |
| not modelled | 100.0 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a m20a metallo peptidase (dape, lpg0809) from2 legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.503 a resolution
24 | c3ct9B_ |
| not modelled | 100.0 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:acetylornithine deacetylase; PDBTitle: crystal structure of a putative zinc peptidase (np_812461.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.31 a resolution
25 | c2f7vA_ |
| not modelled | 100.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:aectylcitrulline deacetylase; PDBTitle: structure of acetylcitrulline deacetylase complexed with2 one co
26 | c1vixA_ |
| not modelled | 100.0 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of a putative peptidase t
27 | c3mruB_ |
| not modelled | 100.0 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
28 | c2qyvB_ |
| not modelled | 100.0 | 14 | PDB header:hydrolase Chain: B: PDB Molecule:xaa-his dipeptidase; PDBTitle: crystal structure of putative xaa-his dipeptidase (yp_718209.1) from2 haemophilus somnus 129pt at 2.11 a resolution
29 | c3khzA_ |
| not modelled | 100.0 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:putative dipeptidase sacol1801; PDBTitle: crystal structure of r350a mutant of staphylococcus aureus2 metallopeptidase (sapep/dape) in the apo-form
30 | d1vgya1 |
| not modelled | 100.0 | 16 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
31 | c1yloA_ |
| not modelled | 99.9 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein sf2450; PDBTitle: crystal structure of protein of unknown function (possible2 aminopeptidase) s2589 from shigella flexneri 2a str. 2457t
32 | c1vheA_ |
| not modelled | 99.9 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:aminopeptidase/glucanase homolog; PDBTitle: crystal structure of a aminopeptidase/glucanase homolog
33 | c2cf4A_ |
| not modelled | 99.9 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:protein ph0519; PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell
34 | c1y0yA_ |
| not modelled | 99.9 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:frv operon protein frvx; PDBTitle: crystal structure of tetrahedral aminopeptidase from p. horikoshii in2 complex with amastatin
35 | c3isxA_ |
| not modelled | 99.9 | 9 | PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of endoglucanase (tm1050) from thermotoga2 maritima at 1.40 a resolution
36 | c3t6mA_ |
| not modelled | 99.9 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of the catalytic domain of dape protein from2 v.cholerea in the zn bound form
37 | c2pe3A_ |
| not modelled | 99.9 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3
38 | c3kl9F_ |
| not modelled | 99.9 | 15 | PDB header:hydrolase Chain: F: PDB Molecule:glutamyl aminopeptidase; PDBTitle: crystal structure of pepa from streptococcus pneumoniae
39 | d1vhea2 |
| not modelled | 99.9 | 14 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
40 | d1cg2a1 |
| not modelled | 99.8 | 17 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
41 | d1z2la2 |
| not modelled | 99.8 | 9 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
42 | c2fvgA_ |
| not modelled | 99.8 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of endoglucanase (tm1049) from thermotoga maritima2 at 2.01 a resolution
43 | d1cg2a2 |
| not modelled | 99.8 | 17 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
44 | d1z2la1 |
| not modelled | 99.8 | 12 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
45 | d1lfwa1 |
| not modelled | 99.8 | 16 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
46 | c1q7lA_ |
| not modelled | 99.8 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:aminoacylase-1; PDBTitle: zn-binding domain of the t347g mutant of human aminoacylase-2 i
47 | c1vhoA_ |
| not modelled | 99.8 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of a putative peptidase/endoglucanase
48 | d1ysja2 |
| not modelled | 99.8 | 21 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
49 | d2grea2 |
| not modelled | 99.8 | 12 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
50 | d1r3na2 |
| not modelled | 99.7 | 15 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
51 | d1xmba2 |
| not modelled | 99.7 | 15 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
52 | d1vgya2 |
| not modelled | 99.6 | 16 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
53 | d1vixa1 |
| not modelled | 99.6 | 20 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
54 | d1yloa2 |
| not modelled | 99.6 | 12 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
55 | d2fvga2 |
| not modelled | 99.5 | 10 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
56 | d1fnoa4 |
| not modelled | 99.5 | 18 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
57 | d1xfoa2 |
| not modelled | 99.5 | 15 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
58 | d1vhoa2 |
| not modelled | 99.5 | 15 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
59 | c3cpxC_ |
| not modelled | 99.4 | 12 | PDB header:hydrolase Chain: C: PDB Molecule:aminopeptidase, m42 family; PDBTitle: crystal structure of putative m42 glutamyl aminopeptidase2 (yp_676701.1) from cytophaga hutchinsonii atcc 33406 at 2.39 a3 resolution
60 | d1lfwa2 |
| not modelled | 99.2 | 17 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
61 | c2greC_ |
| not modelled | 99.2 | 16 | PDB header:hydrolase Chain: C: PDB Molecule:deblocking aminopeptidase; PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
62 | d1r3na1 |
| not modelled | 99.1 | 15 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
63 | c3tc8A_ |
| not modelled | 98.8 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:leucine aminopeptidase; PDBTitle: crystal structure of a hypothetical zn-dependent exopeptidase2 (bdi_3547) from parabacteroides distasonis atcc 8503 at 1.06 a3 resolution
64 | d1tkja1 |
| not modelled | 98.8 | 26 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
65 | c3guxA_ |
| not modelled | 98.7 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:putative zn-dependent exopeptidase; PDBTitle: crystal structure of a putative zn-dependent exopeptidase (bvu_1317)2 from bacteroides vulgatus atcc 8482 at 1.80 a resolution
66 | d1rtqa_ |
| not modelled | 98.7 | 14 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
67 | c3pb6X_ |
| not modelled | 98.5 | 23 | PDB header:transferase Chain: X: PDB Molecule:glutaminyl-peptide cyclotransferase-like protein; PDBTitle: crystal structure of the catalytic domain of human golgi-resident2 glutaminyl cyclase at ph 6.5
68 | d2afwa1 |
| not modelled | 98.5 | 12 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Glutaminyl-peptide cyclotransferase-like
69 | d1y0ya2 |
| not modelled | 98.5 | 11 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
70 | d1fnoa3 |
| not modelled | 98.2 | 15 | Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain
71 | d3bi1a3 |
| not modelled | 97.7 | 18 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:FolH catalytic domain-like
72 | c3iibA_ |
| not modelled | 96.9 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:peptidase m28; PDBTitle: crystal structure of peptidase m28 precursor (yp_926796.1) from2 shewanella amazonensis sb2b at 1.70 a resolution
73 | d1de4c3 |
| not modelled | 96.6 | 17 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:FolH catalytic domain-like
74 | c2ek8A_ |
| not modelled | 96.6 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase; PDBTitle: aminopeptidase from aneurinibacillus sp. strain am-1
75 | c2ootA_ |
| not modelled | 93.2 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:glutamate carboxypeptidase 2; PDBTitle: a high resolution structure of ligand-free human glutamate2 carboxypeptidase ii
76 | c1cx8F_ |
| not modelled | 92.7 | 18 | PDB header:metal transport Chain: F: PDB Molecule:transferrin receptor protein; PDBTitle: crytal structure of the ectodomain of human transferrin receptor
77 | c3rbuA_ |
| not modelled | 91.4 | 25 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:glutamate carboxypeptidase 2; PDBTitle: n-terminally avitev-tagged human glutamate carboxypeptidase ii in2 complex with 2-pmpa
78 | c3k9tA_ |
| not modelled | 89.0 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:putative peptidase; PDBTitle: crystal structure of putative peptidase (np_348812.1) from clostridium2 acetobutylicum at 2.37 a resolution
79 | d1y7ea2 |
| not modelled | 88.7 | 10 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases
80 | c2glfB_ |
| not modelled | 86.4 | 14 | PDB header:hydrolase Chain: B: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: crystal structure of aminipeptidase (m18 family) from thermotoga2 maritima
81 | c3l6sA_ |
| not modelled | 83.0 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:aspartyl aminopeptidase; PDBTitle: crystal structure of human aspartyl aminopeptidase (dnpep),2 in complex with aspartic acid hydroxamate
82 | c1y7eA_ |
| not modelled | 78.6 | 11 | PDB header:hydrolase Chain: A: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: the crystal structure of aminopeptidase i from borrelia burgdorferi2 b31
83 | c2ijzF_ |
| not modelled | 74.5 | 18 | PDB header:hydrolase Chain: F: PDB Molecule:probable m18-family aminopeptidase 2; PDBTitle: crystal structure of aminopeptidase
84 | d1wj9a2 |
| not modelled | 25.9 | 14 | Fold:Ferredoxin-like Superfamily:CRISPR-associated protein Family:CRISPR-associated protein
85 | c1wj9A_ |
| not modelled | 22.6 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:crispr-associated protein; PDBTitle: crystal structure of a crispr-associated protein from2 thermus thermophilus
86 | d1ocsa_ |
| not modelled | 20.8 | 25 | Fold:PX domain Superfamily:PX domain Family:PX domain
87 | d1a9xa2 |
| not modelled | 17.3 | 25 | Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
88 | c3iwfA_ |
| not modelled | 17.2 | 18 | PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator rpir family; PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
89 | c2v3sB_ |
| not modelled | 16.7 | 24 | PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase osr1; PDBTitle: structural insights into the recognition of substrates and2 activators by the osr1 kinase
90 | c1ocuA_ |
| not modelled | 15.5 | 25 | PDB header:sorting protein Chain: A: PDB Molecule:sorting nexin; PDBTitle: crystal structure of the yeast px-domain protein grd19p2 (sorting nexin 3) complexed to3 phosphatidylinosytol-3-phospahte.
91 | c2qj8B_ |
| not modelled | 15.1 | 20 | PDB header:hydrolase Chain: B: PDB Molecule:mlr6093 protein; PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution
92 | d1lama1 |
| not modelled | 14.6 | 16 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Leucine aminopeptidase, C-terminal domain
93 | d1gyta2 |
| not modelled | 14.5 | 17 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Leucine aminopeptidase, C-terminal domain
94 | d1wo8a1 |
| not modelled | 14.4 | 14 | Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA
95 | c3qrqA_ |
| not modelled | 14.4 | 14 | PDB header:rna binding protein/rna Chain: A: PDB Molecule:putative uncharacterized protein tthb192; PDBTitle: structure of thermus thermophilus cse3 bound to an rna representing a2 pre-cleavage complex
96 | c3hy5A_ |
| not modelled | 13.5 | 9 | PDB header:transport protein Chain: A: PDB Molecule:retinaldehyde-binding protein 1; PDBTitle: crystal structure of cralbp
97 | c2yvqA_ |
| not modelled | 13.5 | 20 | PDB header:ligase Chain: A: PDB Molecule:carbamoyl-phosphate synthase; PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens
98 | c1q7lB_ |
| not modelled | 13.5 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:aminoacylase-1; PDBTitle: zn-binding domain of the t347g mutant of human aminoacylase-2 i
99 | c2dbiA_ |
| not modelled | 13.3 | 15 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ybiu; PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0