Phyre 2 alignment of P0AD37 with c3dkwB_

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Job Description | P0AD37
Confidence | 26.78% | Date | Thu Jan 5 11:19:54 GMT 2012
Rank | 115 | Aligned Residues | 34
% Identity | 12% | Template | c3dkwB_
PDB info | PDB header:transcription regulator | Chain: B: PDB Molecule:dnr protein; | PDBTitle: crystal structure of dnr from pseudomonas aeruginosa.
Resolution | 3.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | T | P | D | E | L | A | R | L | T | G | Y | S | R | Q | T | I | N | . | . | . | K | W | V | R | K | E | G | W | T | T | S | P | K | P | G | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | A | K | Q | L | V | A | G | H | L | S | I | Q | P | E | T | F | S | R | I | M | H | R | L | G | D | E | G | I | I | H | L | D | G | R | E | I
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  | S | S | S | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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