15/01/2012 02:50:42 : INFO  : Run start: Sun Jan 15 02:50:40 GMT 2012
15/01/2012 02:50:52 : INFO  : Initialised job
15/01/2012 02:50:55 : INFO  : Renaming log file 'phyre2_20120115_025039.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/phyre_20120115_025039.log'
15/01/2012 02:50:57 : INFO  : Initialised job:
Sequence
>batch____
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG
QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK

15/01/2012 02:50:59 : INFO  : Checked sequence
15/01/2012 02:51:06 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 02:51:08 : INFO  : PSI-BLAST 3 iterations
15/01/2012 02:51:57 : INFO  : PSI-BLAST 5 iterations
15/01/2012 02:52:47 : INFO  : Finished PSI-BLAST
15/01/2012 02:52:51 : INFO  : Running Buildali to generate a3m file
15/01/2012 02:58:51 : INFO  : Converting to HMM
15/01/2012 02:58:55 : INFO  : Calibrating HMM
15/01/2012 02:59:12 : INFO  : Searching HMM database
15/01/2012 03:02:01 : INFO  : Finished buildali
15/01/2012 03:02:04 : INFO  : Predicting secondary structure
15/01/2012 03:02:17 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 03:02:20 : INFO  : Predicting Disordered regions
15/01/2012 03:02:28 : INFO  : Predicted Disorder (Disopred)
15/01/2012 03:02:31 : INFO  : Running memsat_svm check
15/01/2012 03:05:30 : INFO  : Globular protein
15/01/2012 03:05:33 : INFO  : Predicted Transmembrane (memsat_svm) ID '774d8878fbf24622'
15/01/2012 03:05:36 : INFO  : Initialising fold library search
15/01/2012 03:05:42 : INFO  : Initialised search input
15/01/2012 03:05:45 : INFO  : Building Ensemble models
15/01/2012 03:05:51 : INFO  : Building hh.d1tnsa_.model.1.pdb
15/01/2012 03:06:14 : INFO  : Building hh.d1qpma_.model.2.pdb
15/01/2012 03:06:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/hh.d1qpma_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/d1qpma_.2.pdb
15/01/2012 03:06:40 : INFO  : Building hh.d2etha1.model.3.pdb
15/01/2012 03:07:00 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/hh.d2etha1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/d2etha1.3.pdb
15/01/2012 03:07:07 : INFO  : Building hh.c2qwwB_.model.4.pdb
15/01/2012 03:07:26 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/hh.c2qwwB_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/774d8878fbf24622/c2qwwB_.12.pdb
15/01/2012 03:07:33 : INFO  : Building d1tnsa_.1.pdb
15/01/2012 03:07:55 : INFO  : Building d1qpma_.2.pdb
15/01/2012 03:08:18 : INFO  : Building d2etha1.3.pdb
15/01/2012 03:08:40 : INFO  : Building c3k0lA_.4.pdb
15/01/2012 03:09:02 : INFO  : Building d1lj9a_.5.pdb
15/01/2012 03:09:23 : INFO  : Building c3nqoB_.6.pdb
15/01/2012 03:09:43 : INFO  : Building c3nrvC_.7.pdb
15/01/2012 03:10:05 : INFO  : Building d1s3ja_.8.pdb
15/01/2012 03:10:26 : INFO  : Building c2nnnB_.9.pdb
15/01/2012 03:10:49 : INFO  : Building d3broa1.10.pdb
15/01/2012 03:11:11 : INFO  : Building c3bjaA_.11.pdb
15/01/2012 03:11:31 : INFO  : Building c2qwwB_.12.pdb
15/01/2012 03:11:52 : INFO  : Building d1lnwa_.13.pdb
15/01/2012 03:12:13 : INFO  : Building c3bj6B_.14.pdb
15/01/2012 03:12:35 : INFO  : Building c3bddD_.15.pdb
15/01/2012 03:12:57 : INFO  : Building c3bpxB_.16.pdb
15/01/2012 03:13:19 : INFO  : Building c2gxgA_.17.pdb
15/01/2012 03:13:41 : INFO  : Building c3cjnA_.18.pdb
15/01/2012 03:14:04 : INFO  : Building c2nyxB_.19.pdb
15/01/2012 03:14:26 : INFO  : Building c3kp3B_.20.pdb
15/01/2012 03:16:21 : INFO  : Finished HH model building
15/01/2012 03:16:23 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 03:17:35 : INFO  : html domain output complete ID '774d8878fbf24622'
15/01/2012 03:35:23 : INFO  : Run end  : Sun Jan 15 03:35:21 GMT 2012
