BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (114 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobac...   137   1e-31
UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobact...   127   8e-29
UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding...   122   5e-27
UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Ent...   119   2e-26
UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding...   119   3e-26
UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding...   118   6e-26
UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding...   116   2e-25
UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding...   116   2e-25
UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronoba...   115   3e-25
UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacter...   114   8e-25
UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Provide...   114   1e-24
UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-bindin...   114   1e-24
UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis...   113   2e-24
UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serrati...   104   9e-22
UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=...   100   1e-20
UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersin...    85   7e-16
UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinob...    67   2e-10
UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=M...    59   6e-08
UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Hae...    59   6e-08
UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10     55   6e-07
UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=...    54   1e-06
UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-bindin...    54   1e-06
UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU                53   3e-06
UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteur...    53   4e-06
UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella s...    52   5e-06
UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia hae...    52   5e-06
UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5 Tax...    52   7e-06
UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototroph...    52   7e-06
UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemoph...    51   1e-05
UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgar...    50   2e-05
UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinom...    49   4e-05
UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM5...    49   4e-05
UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8          49   4e-05
UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfo...    49   6e-05
UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella ba...    49   7e-05
UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU      48   9e-05
UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB...    48   1e-04
UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-Eb...    48   1e-04
UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas aue...    48   1e-04
UniRef50_A7JV32 Possible bacteriophage transcriptional regulator...    47   1e-04
UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillu...    47   2e-04
UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus in...    47   2e-04
UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio ...    47   2e-04
UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae Rep...    45   6e-04
UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella...    45   0.001
UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolyt...    44   0.002
UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneiden...    43   0.002
UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pas...    42   0.005
UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum al...    42   0.006
UniRef50_D2NHS7 Hypothetical phage protein n=1 Tax=Escherichia c...    42   0.008
UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisser...    42   0.009
UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae R...    41   0.010
UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmone...    41   0.011
UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flex...    41   0.014
UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Ente...    41   0.015
UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria R...    40   0.019
UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkeniv...    40   0.020
UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas ...    40   0.022
UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=...    40   0.032
UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage...    38   0.072

>UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobacteriaceae
           RepID=YFEC_ECOL6
          Length = 114

 Score =  137 bits (344), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
           MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG
Sbjct: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
           QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
Sbjct: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114


>UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae
           RepID=YFED_ECOLI
          Length = 130

 Score =  127 bits (320), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER--- 57
           MT +ELA   G ++QT+N+W+R++GW T   PGV+GG+ARL+ V+ QV E+I+N      
Sbjct: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67

Query: 58  ------PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                  E +    A    AP    ++     MT +EQ++    L REGI   L RL I 
Sbjct: 68  TPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDID 127

Query: 112 DS 113
           +S
Sbjct: 128 ES 129


>UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding n=9
           Tax=Enterobacteriaceae RepID=C6CJR2_DICZE
          Length = 136

 Score =  122 bits (305), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T +EL  + G   SRQ +NK  +  GW    + GVQG K     +     E      R E
Sbjct: 13  TTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQG-KGVEYAIWSLPEEVKTTLMR-E 70

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
              +   ++     E   + +  +++  E+ +    +LREG +G+L RL 
Sbjct: 71  TSPDYAVVTPTNVQESTWIQIYHQLSVEERTRLIGHILREGAMGMLARLE 120


>UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae
           RepID=C4K715_HAMD5
          Length = 115

 Score =  119 bits (299), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +  EL    G   S Q IN+  R++GW    + GVQG KA   H++   +  ++   R +
Sbjct: 7   SAKELIHSPGLPSSTQGINQMARRQGWKHRRRLGVQG-KALEYHIDSLPKPILKQL-RLK 64

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
              E  +L+   P   + +   +++T  E+++  + L REGI GL++RL   
Sbjct: 65  EDAEKYSLNQQDP-FTIWIEAYRQLTDSEREKLIAFLFREGIQGLIKRLSND 115


>UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding n=3
           Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5
          Length = 116

 Score =  119 bits (298), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 3   PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             EL  + G   S Q IN   R+EGW +  + GVQG KA   H+N       R+    + 
Sbjct: 8   ARELTGIAGLPSSPQGINLMARREGWISRRRKGVQG-KAVEYHINSLPIG-ARSLLVLQE 65

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
                 L    PL  + V     ++  E+++  + L+REGI  LL  +   +
Sbjct: 66  DPAEYQLERQDPL-AVWVEYYYHLSESEREKVLTFLMREGIDSLLALIAAEE 116


>UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding protein n=6
           Tax=Enterobacteriaceae RepID=D2BRS4_DICD5
          Length = 140

 Score =  118 bits (295), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP- 58
           T +EL  + G   SRQ +NK  +  GW    + GVQG K     +     E      R  
Sbjct: 7   TTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQG-KGVEYAIWSLPEEVKATLMRAT 65

Query: 59  --------EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                   E   +  + +     E   + +  +++  E+ +    +LREG + +L RL 
Sbjct: 66  LMGTTLMRETAPDYVSAASAGAQEYTWIQIYHQLSAEERTRLIGHILREGAMSVLARLE 124


>UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding n=31
           Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY
          Length = 115

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 5/111 (4%)

Query: 3   PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             ELA L G   S Q IN   ++EGW    + GVQG KA   H+       + + +  E 
Sbjct: 8   AKELAGLEGLPSSPQGINLMAKREGWEQRRRRGVQG-KAVEYHIGSLPITILNSLQLREE 66

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
             +  A +   PL  L V      T  E++Q  S + REG   L++RL + 
Sbjct: 67  PAQY-ATTRQDPL-TLWVEAYYRFTEAEREQVISFIFREGAKSLIERLEMD 115


>UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding n=2
           Tax=Edwardsiella RepID=C5B7F4_EDWI9
          Length = 114

 Score =  116 bits (290), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +  ELA + G+  + Q IN+  + EGW    + GVQG KA   H++    E +      +
Sbjct: 7   SAKELAGIGGFPSTPQAINQRAKSEGWRRQRRSGVQG-KAVEYHISCFPPEVVDELLARD 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
            Q +    S       +  ++  +M+  E+K+ TSL+LR GI   L+RLG
Sbjct: 66  EQAQYLISSNQPE--KVWYSILLQMSEEERKKVTSLILRIGINEFLRRLG 113


>UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MKV6_ENTS8
          Length = 129

 Score =  115 bits (289), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 10/123 (8%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
           MT  EL  L+GY+ Q I++W RK GW   P  G +GG A L+ + +QV +Y    ++   
Sbjct: 8   MTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGG-ALLILITQQVYDYFLATDKLRY 66

Query: 61  QGE---------APALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                       AP ++ D  +    +   + ++P EQ + + L+  EG  GL++RLG+R
Sbjct: 67  SAHLYNRIEETPAPYVTWDNEMMAQFIRTLEMLSPQEQARLSELISEEGAAGLVKRLGLR 126

Query: 112 DSK 114
           D K
Sbjct: 127 DEK 129


>UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacteriaceae
           RepID=C4XBN9_KLEPN
          Length = 130

 Score =  114 bits (286), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER--- 57
           MTP ELA   G +RQTIN+WVR++ W T   PGV+GG+ARLV +++ VRE++ N      
Sbjct: 8   MTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARRH 67

Query: 58  -------PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110
                   E  G       DA    +     + MTP EQ Q   LL REGI G L RLGI
Sbjct: 68  LLTDNHLAESPGAYLVNEADAIWRQIT-ETLQLMTPAEQLQLRDLLAREGISGFLARLGI 126


>UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Providencia
           RepID=B6XCH8_9ENTR
          Length = 118

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +T  EL    G   S Q IN   R+E W +  + G+QG KA   H++    +        
Sbjct: 6   LTAKELVGRQGLPSSTQGINAMARRENWLSRKRRGIQG-KALEYHISSIPIDLEEPTVMY 64

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
           E                +      +++  E+    S ++R+G + L+  +
Sbjct: 65  E--APRIYHVKRDEHAHIWQEAYNQLSHDERVAVLSFIMRKGALALIDLI 112


>UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-binding n=5
           Tax=Enterobacteriaceae RepID=C2LKG3_PROMI
          Length = 115

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  EL  + G   S Q +N   ++E W    +   QG      H +    E +   E  E
Sbjct: 7   TAMELTGIGGLPKSPQGVNAKAKRESWLKQKRTNKQG-NGVEYHYSCLPEETLIALELYE 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
                  L+ + PL V+ V   +++   EQK  T L+LR+GI   L+++
Sbjct: 66  PLAHY-KLNKEEPL-VIWVKAFQQLNDGEQKTVTELILRDGIRSFLEKI 112


>UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW40_SODGM
          Length = 127

 Score =  113 bits (282), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +   EL  + G   +RQ +N+  R+EGW    + G +G KA     +    + ++     
Sbjct: 8   IATHELIGVGGLPKTRQGLNRRAREEGWQKRRREGARG-KAVEYSWHSLP-DMVKKTLSL 65

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDS 113
                   LS           + ++++  E+    S ++REG++ LL+RL   D 
Sbjct: 66  RTNPAEYQLSPQ-ETSATWNEIYRQLSDAERDFIVSFIVREGVLNLLKRLDYPDE 119


>UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8G8Y9_SERP5
          Length = 90

 Score =  104 bits (260), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 20  WVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVT 79
             R+EGW +  + GVQG KA   H++       RN    + +  +  +    PL V+ + 
Sbjct: 1   MARREGWNSRRRKGVQG-KALEYHIDSLPAGT-RNLLVLKEEPASYQVERKDPL-VVWIE 57

Query: 80  LAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
               +T  E+++  + L+REGI  LL R+   
Sbjct: 58  YYYHLTECEREKVLAFLIREGIGSLLARISAD 89


>UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM
          Length = 728

 Score =  100 bits (249), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           T  ELA   G + + +    R+EGW    KPG  GG   LV                E +
Sbjct: 9   TAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGNEWLVV--SMPEGTALAVRMAEER 66

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
               A + D P      +     TP++ K+    L R
Sbjct: 67  TAVAAAASDHPPTTSAPSAPGAPTPLDPKRRQQALAR 103


>UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii
           ATCC 33638 RepID=C4U3A5_YERKR
          Length = 73

 Score = 85.1 bits (209), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 33  GVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQF 92
           G+QG K     ++                 E  ++        + +   K++TP E+ +F
Sbjct: 2   GIQG-KGIEYFIDSLPDNVSTYIYHHSELFERISIQ---EHFDIWINAFKQLTPSERYKF 57

Query: 93  TSLLLREGIIGLLQRL 108
           +  +LREGII + + L
Sbjct: 58  SEYILREGIISIYKNL 73


>UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinobacillus minor
          NM305 RepID=C5S4R0_9PAST
          Length = 179

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  ELA + G   + Q INK  R + W    K GVQGG A   H         +      
Sbjct: 9  SASELAGIQGLPKTPQGINKRARTQNWQKRNKDGVQGG-AVEYHYTSFPENVQQALGFIV 67

Query: 60 GQGEAPALSGDA 71
           Q E    + D 
Sbjct: 68 SQTEHSNQTRDD 79


>UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0EWA9_9PROT
          Length = 742

 Score = 58.5 bits (140), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 38/115 (33%), Gaps = 15/115 (13%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVR--------- 49
           M   ELA L G   + + I K   +EGW +  +   Q GK      +             
Sbjct: 5   MPASELAGLPGLPGTDRGIRKLADREGWQSRKR---QKGKGLEYSPSSLPEVTRTHLAHL 61

Query: 50  EYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGL 104
                 +    Q E    +   P+E +     +EM   E  +   L+ R GI   
Sbjct: 62  SVKAAMDEVSKQPEYAQYAEAEPVESIPGVKTREMLDEEAAEHRRLIAR-GIAEF 115


>UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae
           RepID=Q58ZD8_HAEIN
          Length = 669

 Score = 58.5 bits (140), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 1   MTPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREY-IRNAER 57
           +T  E+A + G S     +N+  RKE W      GVQGG       +    E       +
Sbjct: 5   VTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGG-GYEYSFSSLPLEVQTEYLLK 63

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPV--EQKQFTS 94
              + +    + D+  + ++ +    +     EQ++   
Sbjct: 64  HSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAE 102


>UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10
          Length = 174

 Score = 55.1 bits (131), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 3/113 (2%)

Query: 3   PDELARLTGYSRQTIN--KWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             EL  + G  +   N  +    E W    + G +G  A   H+N    E  R  +    
Sbjct: 12  AKELEGMPGVPKLATNITRKAVAEDWVKRQRHGGKGV-AYEYHINSLPEETRRAIKGASL 70

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDS 113
             +    S    ++  L+     +TP EQ     ++   GI GL+  +  +D 
Sbjct: 71  SDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAGIKGLMPTIVSKDK 123


>UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=4
          Tax=Desulfovibrio RepID=Q30W02_DESDG
          Length = 708

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          T  ELA     +  TI +   +EGW + P+ G  GG      ++             
Sbjct: 9  TAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGGNEW--IISSMPEATRTKLLAA 63


>UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root
           RepID=A4JDI5_BURVG
          Length = 726

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 8/111 (7%)

Query: 2   TPDELA--RLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  ELA   L G   + Q +     +E W    +     GK     ++    E       
Sbjct: 10  TAPELAMLGLPGVPTTEQGVRYSATREKWAARRRAK---GKGLEYALDSLPAEAQAAIRH 66

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
                   ++       V+      ++   + ++  +   R+GI+ +L R+
Sbjct: 67  RASAALVTSVPAQPAKAVIRREQQLQLVETDAQRLRAD-ARKGILSILDRI 116


>UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU
          Length = 663

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1  MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          ++P E A L G   +   +    +K+GW    + GV+GGKA   + N    E        
Sbjct: 5  VSPKECANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKAIEYNANSLPVEAKAALLLR 64

Query: 59 EGQGE 63
          +G+ E
Sbjct: 65 QGEIE 69


>UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
          RepID=Q9CNL1_PASMU
          Length = 216

 Score = 52.8 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 13 SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAP 72
          S + I K   +EGW    + GV+G K    H         +     + +     ++    
Sbjct: 10 SDKGIVKKAAREGWQKRQRQGVKG-KTFEYHYTSFPIAVQQQLGLYQAEQPHSQVNEPRR 68

Query: 73 LEVLLVTLAKEMTPVEQKQFTSLL 96
                    E++ +E  Q    +
Sbjct: 69 HYTT------EVSSIENTQTEDHI 86


>UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1
          RepID=A1RM55_SHESW
          Length = 727

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 4/73 (5%)

Query: 1  MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          +T  EL        +   + +  ++EGW    + G  GG     H+N       ++    
Sbjct: 6  LTAKELEDFPELPKTESGVIRRAKREGWICRKREGRGGG--FEYHLNSLPLAAQQHILSE 63

Query: 59 EGQGEAPALSGDA 71
          + + +    +  A
Sbjct: 64 KTKAQIAKKTEQA 76


>UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213
          RepID=A7JV30_PASHA
          Length = 656

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 3  PDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREY-----IRNA 55
            E+A L+G      ++++   KEGW      GV+G      H+     E      +  A
Sbjct: 7  AKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGV-TYEYHLTSLPIETQQQLRLNAA 65

Query: 56 ERPEGQGEAPALSGDAP 72
               Q        D P
Sbjct: 66 LAVIPQAAELQPKRDDP 82


>UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5
           Tax=Gammaproteobacteria RepID=C0N301_9GAMM
          Length = 722

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 3/92 (3%)

Query: 2   TPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA   G  +  + +N+   K+GW T     V+GG A   H++    E      +  
Sbjct: 10  TATELANKPGLPKYKRGVNQQASKQGWNTRQVK-VRGGSANEYHLSSLPVETQAALIKQH 68

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQ 91
                 + S           L +      QKQ
Sbjct: 69  LPTPVKSSSESTEFSYDPQALWQHYDNKPQKQ 100


>UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43
          RepID=A9D2T9_9RHIZ
          Length = 647

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 25/85 (29%), Gaps = 8/85 (9%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREYIRNAE 56
          TP E+A   G S + IN+  RK  W         + G  GG     HV+   +       
Sbjct: 6  TPKEIADAAGVSERAINQMARKSHWRHQDQKARKRAGRGGG--WEYHVSLFPQAAQARLM 63

Query: 57 RPEGQGEAPALSG-DAPLEVLLVTL 80
             G       +        L    
Sbjct: 64 VIHGAPANANRNKLADARSKLWARY 88


>UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336
           RepID=B0UVF4_HAES2
          Length = 145

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 8/115 (6%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  EL  + G   + Q I  + +K+ W      GV+G      +V +       +    +
Sbjct: 6   TLKELLDVGGLPSTPQGIILYAKKDKWRRRRVSGVKG-NVFEYYVYDMPESVQTSLGVTK 64

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
                     D   +     L + ++        ++LL  G++ + +RL I   +
Sbjct: 65  ETLALKQELIDDIQKENEKFLNQILSD-----IKNVLLNSGVLRIRERLSITKEE 114


>UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris
           RepID=B8DK74_DESVM
          Length = 732

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 2   TPDELARLTGYSRQ-TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA----- 55
           T  +L  L G S + T+ +   +EGWT+ P+ G  GG   L  +    +   +       
Sbjct: 9   TTRDLLPLLGISSESTVIRRASREGWTSRPRKGRGGGNEWL--LASMPKSTRKALLDGML 66

Query: 56  -----ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110
                E  +     P L    P   +   +   +     +Q    + R  +I  ++RL +
Sbjct: 67  RTAAQEAEKNLPALPPLDAADPRRAIAARM-SPLKHCSNRQREIAMARLALIREVERLAV 125


>UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
          RepID=A6W3I3_MARMS
          Length = 216

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 3/86 (3%)

Query: 2  TPDELARLTGYSRQTIN--KWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          T  ELA   G      N  +  + + W      G++G      H +   +E         
Sbjct: 7  TAAELAGQKGMPAHATNVTRKAKSQNWEYRQITGLRGVN-FEYHASSLPQETQEALGLEG 65

Query: 60 GQGEAPALSGDAPLEVLLVTLAKEMT 85
                A + D+ +  + +  AK  T
Sbjct: 66 VSKPVQAENNDSNMVTIQIYSAKAKT 91


>UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM573
           RepID=D2YK71_VIBMI
          Length = 748

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 13/114 (11%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA L G   + + +     KE W   P+     GK    H+     E I +  R  
Sbjct: 7   TSTELAGLPGLPSTDRNVRIKAEKENWEKRPREI---GKGFEYHIRSFPMETIAHLSRD- 62

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL-LREGIIGLLQRLGIRD 112
                  L   +  E+    L  E+   EQ +   +L   +G + LL  L   D
Sbjct: 63  ------FLQQKSEGELAAEKLVAELAAKEQAKKRHVLNASQGAMRLLNTLKAED 110


>UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8
          Length = 689

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  ELA L G   + + +     ++ W+   +    G KA   HV+   +E         
Sbjct: 6  SAQELAGLPGVPGTARNVKAMAERKSWSGRRRV---GTKAIEYHVSALPKETRAALLNAA 62

Query: 60 GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
              A           L+ T  +++    ++     L
Sbjct: 63 LGEVATKAVRQETQLALVETNRQQLVADARQGVLHAL 99


>UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WSU4_9DELT
          Length = 697

 Score = 48.9 bits (115), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 11/105 (10%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  ELA   G + ++++   ++EGW   P+ G  GGK  L  V+    E          +
Sbjct: 9   STQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGK--LWVVSSMPAEIRDRLASALLR 66

Query: 62  GEAPALSGDAPLEVLLVTLAK---------EMTPVEQKQFTSLLL 97
             A  +   A    +   +            ++  E+   T+ L 
Sbjct: 67  QPAAIIEESAACASIGSNICAPIGTAGNGPALSDRERAIVTARLA 111


>UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella baltica
           RepID=A9L0K4_SHEB9
          Length = 738

 Score = 48.5 bits (114), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 8/99 (8%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  E+A L     + +    ++E W    + G+ GG     H+N    E  +     + +
Sbjct: 7   STVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG--FEYHLNSLPLEARQKL--AKQE 62

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQ----KQFTSLL 96
            E  A S  + +         +M  V Q    K     +
Sbjct: 63  AEQIATSPTSLMRAGSAVAKLQMPAVSQTEKAKSIQQFI 101


>UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU
          Length = 174

 Score = 48.1 bits (113), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 10/86 (11%)

Query: 16 TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQV----REYIRNAERPEGQGEAPALSGDA 71
           ++     +GWT   K GV+GGKA    V         + I +         A A     
Sbjct: 12 GVHYRANVQGWTKQKKEGVKGGKAVEYDVMSMPTKEREQVIAHLGLSTPDTGAQANEKQD 71

Query: 72 ------PLEVLLVTLAKEMTPVEQKQ 91
                 L   L+ + +E+ P E ++
Sbjct: 72 SSELINKLTTTLINMIEELEPDEARK 97


>UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS
          Length = 754

 Score = 47.7 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  ELA + G S Q I K   +EGW    + G  GGK +L        ++     R    
Sbjct: 14  SAKELAVIMGISWQAIQKRADQEGWPCEMETGR-GGKRKLFRRAVLPVDWQARIARQRAA 72

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
             A A++ ++P           +  +E+++    L++E  +    RL
Sbjct: 73  QAAAAIAPESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARL 119


>UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
          RepID=B8GS44_THISH
          Length = 671

 Score = 47.7 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 4/75 (5%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +   LA L G   ++Q +    +++GW    + G  GG+      +           +  
Sbjct: 10 SAKALAGLPGMPGTQQNVTAKAKRDGWACRKRSGKGGGR--EYAFSSLPIATQAALLKAA 67

Query: 60 GQGEAPALSGDAPLE 74
                A +      
Sbjct: 68 EPAARAARAAQGEPA 82


>UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187
          RepID=C4LBA7_TOLAT
          Length = 741

 Score = 47.7 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 7/56 (12%)

Query: 3  PDELARLTGYSRQ---TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA 55
            ELA L G   Q    + K   +E W    +     GK    H++    E     
Sbjct: 7  SSELAGLVGL-PQYQDGVRKKADREDWKNRKRES---GKGLEYHISSLPSETRAYL 58


>UniRef50_A7JV32 Possible bacteriophage transcriptional regulator n=1
          Tax=Mannheimia haemolytica PHL213 RepID=A7JV32_PASHA
          Length = 225

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 21/82 (25%), Gaps = 8/82 (9%)

Query: 2  TPDELARLTGYSRQTIN--KWVRKEGWTTSPKPGVQGGKARLVHVNEQVREY-----IRN 54
          T  E+A +     Q  N  +   K  W      G +G  A   H +              
Sbjct: 11 TASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEGKRGV-AFEYHYSSLPISVQQELGFAQ 69

Query: 55 AERPEGQGEAPALSGDAPLEVL 76
              E      A      +E +
Sbjct: 70 TAVKEEPRTLVAAQTADEMERV 91


>UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillus minor NM305
          RepID=C5S4Q8_9PAST
          Length = 663

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  +LA + G   S Q +NK  R+E W    + G Q GKA   H++    E  +      
Sbjct: 6  SASDLAGVKGMPSSPQGVNKKARQELWQKQQQIGKQ-GKAFEYHISSLPPETQQALRLQA 64

Query: 60 GQGEAPALS 68
               P   
Sbjct: 65 ALAVVPIAE 73


>UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus influenzae
          RepID=Q58ZE0_HAEIN
          Length = 166

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 3  PDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA 55
          P +LA L   S     + +  ++EGW      G++GG     H +       +  
Sbjct: 10 PRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGG-GFEYHYSSLPPAVQQAL 63


>UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
          RepID=A6D441_9VIBR
          Length = 230

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 8/85 (9%)

Query: 3  PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
            EL  L G   S   I +  +++GW +    G    +A   H++    E      R + 
Sbjct: 7  ASELMDLPGMPSSNSGIAQKAKRDGWKSRKTRGQ--SRALEYHISSF-DERDLAELREKY 63

Query: 61 QGEAPALSGDAPLEVLLVTLAKEMT 85
            E      D   E+  V   K+ +
Sbjct: 64 GTEVI---PDNVTEISNVKAIKDFS 85


>UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2
          Length = 662

 Score = 45.0 bits (105), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 6/59 (10%)

Query: 2  TPDELARLTGY----SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE 56
          +  EL  L       +++ +    ++E W +  + G  GG      ++   +E      
Sbjct: 9  SAQELIGLQLVILPTTKKAVIDKAKRENWQSRKRVGRGGG--VEYALSSLPQEVQEEIR 65


>UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella enterica
           RepID=B4TBP2_SALHS
          Length = 124

 Score = 44.7 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 2   TPDELARLTGY--SRQTINKWVRK--EGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE- 56
           T  E   L G+  S   + + + K  EG     +  V+  KA   H++       R  + 
Sbjct: 7   TVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVK-SKAEEFHISVFPLYVHRYLDD 65

Query: 57  RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTS 94
             E     P    +A  E +   + + +TP ++KQ T 
Sbjct: 66  SGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTG 103


>UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JUV9_PASHA
          Length = 176

 Score = 43.9 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 13/120 (10%)

Query: 2   TPDELAR----LTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA         ++Q +    +K+GWTT  K GV GG+     ++   +E      R
Sbjct: 11  SAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGV-GGEILEFALSNLPQEIQTEI-R 68

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQK------QFTSLLLR-EGIIGLLQRLGI 110
                            V        +T  +++         + +L  EG +  ++ +  
Sbjct: 69  SRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREIADARMALVAYVLELEGSMSRIKAITY 128


>UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneidensis
          RepID=Q8EJ30_SHEON
          Length = 715

 Score = 43.1 bits (100), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 5/50 (10%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVR 49
          +P EL +L G   + Q I    + E W +  K    G K    H+     
Sbjct: 7  SPQELLQLPGMPTTVQGIRFKAKTESWESRKKE---GSKGFEYHLGSLPP 53


>UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae
           RepID=TRA_HAEIN
          Length = 687

 Score = 42.3 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 23/83 (27%), Gaps = 3/83 (3%)

Query: 13  SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGE-APALSGDA 71
           + + I +  ++E W +  + G  GG      +     E            + A AL    
Sbjct: 26  APKNIWEQAKRENWKSQKRQGRGGG--LEYELASLPIEVQNELLLKTTPEQTAVALQKIE 83

Query: 72  PLEVLLVTLAKEMTPVEQKQFTS 94
               L      ++      +   
Sbjct: 84  ETRPLASNEVWQLWDEASAKAQE 106


>UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum alkenivorans AK-01
          RepID=B8FD28_DESAA
          Length = 682

 Score = 42.0 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 1  MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQ-GGKARLVHVNEQVREYIRNAERPE 59
          +T  +LA++ G  R T+ +  +KEGW        Q GG  +L H N       R     E
Sbjct: 7  VTCSQLAQVIGQHRSTVLRRAQKEGWAFHEIANRQGGGHQKLYHFNSLPMSIQRAIIEKE 66

Query: 60 GQGEAPALSGDAP 72
             +    +    
Sbjct: 67 LNAQDNGPAPPPE 79


>UniRef50_D2NHS7 Hypothetical phage protein n=1 Tax=Escherichia coli SE15
           RepID=D2NHS7_ECOLX
          Length = 169

 Score = 41.6 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTT---SPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +T +E   + G         +R E   +     +     GK  + H++        + ER
Sbjct: 32  LTAEEFTHIEGMPGTARGARMRLEKLASLHPEIRRKRTAGKGVVYHISA--ATMSLDDER 89

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
              +GEA  L+       L V L + M+P  + Q     LR
Sbjct: 90  NRAKGEAFTLNDSDRQLSLWVQLYRNMSPASRAQLMEQALR 130


>UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisseriaceae
          RepID=C0DX48_EIKCO
          Length = 548

 Score = 41.6 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 8/75 (10%)

Query: 1  MTPDELARL----TGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE 56
          ++  ELA+L       + + I+   ++E W    +    GG      V     E      
Sbjct: 8  LSAAELAQLSIPSLPKTPKGISDKAKREYWPNRRRAQRGGG--VEYQVAGLPEEIQAAVR 65

Query: 57 RPEGQGEAPALSGDA 71
            E Q E        
Sbjct: 66 --ERQAEQLLAQSQP 78


>UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae RepID=A3VYG1_9RHOB
          Length = 707

 Score = 41.2 bits (95), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 21/81 (25%), Gaps = 7/81 (8%)

Query: 13  SRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPAL 67
           +++ IN    +EGW         + G  GG     H +                  A   
Sbjct: 27  TKRKINLLAEREGWARHAGKVRRRKGAGGG--VEYHWSLLPIRARMRLSADLVNSPAARP 84

Query: 68  SGDAPLEVLLVTLAKEMTPVE 88
             D   E       K  T  E
Sbjct: 85  GKDEAWERYAAAGDKARTEAE 105


>UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- RepID=A9MJ52_SALAR
          Length = 124

 Score = 41.2 bits (95), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 2   TPDELARLTGY--SRQTINKWVRK--EGWTTSPKPGVQGGKARLVHVNEQVREYIRNA-E 56
           T  E   L G+  S   + + + K  EG     +  ++  KA   H++       R   E
Sbjct: 7   TVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRLK-SKAEEFHISVFPLYVHRYLDE 65

Query: 57  RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGL 104
             E          +A  + +   + + +TP ++KQ T L   +G+  +
Sbjct: 66  GGEEPVSDHISVQEAEPKDIWEMMFRLLTPEQRKQVTGLFRVKGMKAV 113


>UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flexneri
          RepID=Q0T6N1_SHIF8
          Length = 169

 Score = 40.8 bits (94), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 1  MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLV 42
          MTP ++  L G   + Q ++K  +KEGW    + G +G      
Sbjct: 11 MTPKQITELDGMPGTIQGVHKRAKKEGWPKRSQEGRRGP-GVEY 53


>UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Enterobacteriaceae
          RepID=B7UGE5_ECO27
          Length = 680

 Score = 40.8 bits (94), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 25/105 (23%)

Query: 2  TPDELARLTGY--SRQTI----NKWVRKE-GWTTSPKPGVQGGKARLVHVNEQVREYIRN 54
          + +ELA L G   + Q +    N+       W        +G KA   H++    E  + 
Sbjct: 4  SANELAGLPGLPGTVQGVRWTLNRITETHPEWKRKR----EGTKAFEYHIDCLPAEAQKV 59

Query: 55 AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLRE 99
            +               L   ++  A+    VEQK   ++ +R+
Sbjct: 60 LRKR--------------LTHQVLEDAQLPAVVEQKAVKNVAVRD 90


>UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria RepID=D2TQ32_CITRO
          Length = 695

 Score = 40.4 bits (93), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 13/94 (13%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP- 58
          +  EL  L G   + Q +   +RK   + + +   +G K     ++       +      
Sbjct: 4  SVKELVGLPGMPGTEQGVRYSIRKYATSETSRRRQEGTKGFEYSIDCLPEVTQQALRERY 63

Query: 59 ----------EGQGEAPALSGDAPLEVLLVTLAK 82
                    E        +  +P  V  V   +
Sbjct: 64 ALQLMTQKADESPAPVVTKARRSPDVVDAVEAYR 97


>UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkenivorans AK-01
          RepID=B8FGN6_DESAA
          Length = 653

 Score = 40.4 bits (93), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          T  E+A+  G + +++ +   KEGW         G K    H +        +  +
Sbjct: 7  TAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAH-SGLPIPVQASLLK 61


>UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas sp. JS666
          RepID=Q125Z1_POLSJ
          Length = 772

 Score = 40.0 bits (92), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 1  MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA 55
          +T +EL  L      ++ +++     GW      G  G + R  HV           
Sbjct: 9  LTANELLGLPNMPADKRGVHRKALASGWQYREVAGNGGTR-REYHVASLPATTRAAL 64


>UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI0001699232
          Length = 150

 Score = 39.7 bits (91), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +T  ELA L G   + +++N+     G     K     GK     +     E  R   R 
Sbjct: 5   LTAAELAGLPGMPGTPRSVNR-AGDRGEIERRKKAK--GKGWEYSLTSLPAETQRYLTRT 61

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREG-IIGLLQRLG 109
                A A     P  + L  +   +T  +++Q  + L     I  L QRLG
Sbjct: 62  AAAEIAKAAPPQPPAPIELPLMPD-LTDWQREQMHARLAVLSVIDELAQRLG 112


>UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112
          RepID=Q38452_BPD31
          Length = 48

 Score = 38.5 bits (88), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 3  PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHV 44
          P +LA L G   + + + K   +EGW      G  GG     HV
Sbjct: 7  PTKLAGLPGLPTTDRGVRKLAEREGWKKQKHSGRGGG--YEYHV 48


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobac...   118   6e-26
UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Ent...   116   3e-25
UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding...   109   4e-23
UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding...   108   6e-23
UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Provide...   108   7e-23
UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding...   107   1e-22
UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobact...   107   1e-22
UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-bindin...   106   2e-22
UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding...   105   4e-22
UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding...   104   6e-22
UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis...   104   7e-22
UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronoba...    98   9e-20
UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serrati...    97   2e-19
UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacter...    95   5e-19
UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=...    94   1e-18
UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10     89   3e-17
UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=M...    87   1e-16
UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM5...    86   3e-16
UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5 Tax...    86   5e-16
UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemoph...    83   2e-15
UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-bindin...    83   3e-15
UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgar...    83   4e-15
UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Hae...    82   6e-15
UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB...    79   3e-14
UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinom...    78   8e-14
UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfo...    78   1e-13
UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteur...    78   1e-13
UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella s...    78   1e-13
UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8          77   2e-13
UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinob...    77   2e-13
UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella...    76   5e-13
UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU                74   9e-13
UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersin...    74   1e-12
UniRef50_A7JV32 Possible bacteriophage transcriptional regulator...    73   3e-12
UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolyt...    72   4e-12
UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella ba...    72   4e-12
UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=...    70   3e-11
UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia hae...    69   4e-11
UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio ...    69   5e-11
UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-Eb...    69   6e-11
UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototroph...    68   7e-11
UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas aue...    67   1e-10
UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU      65   8e-10
UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae Rep...    64   1e-09
UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillu...    61   1e-08
UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus in...    60   2e-08

Sequences not found previously or not previously below threshold:

UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmone...    71   1e-11
UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneiden...    60   2e-08
UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas ...    57   1e-07
UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=...    56   5e-07
UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pas...    56   5e-07
UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisser...    54   1e-06
UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum al...    53   3e-06
UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria R...    52   5e-06
UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseoba...    51   1e-05
UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae R...    51   1e-05
UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage...    51   1e-05
UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkeniv...    49   6e-05
UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Ente...    49   7e-05
UniRef50_Q32IA5 Putative uncharacterized protein n=1 Tax=Shigell...    48   7e-05
UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 Re...    48   8e-05
UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongens...    48   8e-05
UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 1280...    48   8e-05
UniRef50_UPI0001905178 hypothetical protein RetlG_31223 n=1 Tax=...    48   1e-04
UniRef50_A9LZ01 Bacteriophage transposase n=11 Tax=Neisseriaceae...    47   1e-04
UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum ...    47   2e-04
UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=...    47   2e-04
UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A...    47   2e-04
UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=M...    46   3e-04
UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magneto...    46   5e-04
UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rh...    45   7e-04
UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flex...    45   8e-04
UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobactera...    43   0.003
UniRef50_B1JIP4 Transposase-like Mu n=4 Tax=Gammaproteobacteria ...    43   0.003
UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotr...    43   0.003
UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomo...    43   0.004
UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingell...    42   0.006
UniRef50_B0P6Z0 Putative uncharacterized protein n=2 Tax=Clostri...    41   0.014

>UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobacteriaceae
           RepID=YFEC_ECOL6
          Length = 114

 Score =  118 bits (295), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
           MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG
Sbjct: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
           QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
Sbjct: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114


>UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae
           RepID=C4K715_HAMD5
          Length = 115

 Score =  116 bits (289), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +  EL    G   S Q IN+  R++GW    + GVQG KA   H++   +  ++   R +
Sbjct: 7   SAKELIHSPGLPSSTQGINQMARRQGWKHRRRLGVQG-KALEYHIDSLPKPILKQL-RLK 64

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
              E  +L+   P   + +   +++T  E+++  + L REGI GL++RL   
Sbjct: 65  EDAEKYSLNQQDP-FTIWIEAYRQLTDSEREKLIAFLFREGIQGLIKRLSND 115


>UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding n=2
           Tax=Edwardsiella RepID=C5B7F4_EDWI9
          Length = 114

 Score =  109 bits (271), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +  ELA + G+  + Q IN+  + EGW    + GVQG KA   H++    E +      +
Sbjct: 7   SAKELAGIGGFPSTPQAINQRAKSEGWRRQRRSGVQG-KAVEYHISCFPPEVVDELLARD 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
            Q +    S     E +  ++  +M+  E+K+ TSL+LR GI   L+RLG
Sbjct: 66  EQAQYLISSNQ--PEKVWYSILLQMSEEERKKVTSLILRIGINEFLRRLG 113


>UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding n=3
           Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5
          Length = 116

 Score =  108 bits (269), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 3   PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             EL  + G   S Q IN   R+EGW +  + GVQG KA   H+N        +    + 
Sbjct: 8   ARELTGIAGLPSSPQGINLMARREGWISRRRKGVQG-KAVEYHINSLPIGAR-SLLVLQE 65

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
                 L    PL  + V     ++  E+++  + L+REGI  LL  +   +
Sbjct: 66  DPAEYQLERQDPL-AVWVEYYYHLSESEREKVLTFLMREGIDSLLALIAAEE 116


>UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Providencia
           RepID=B6XCH8_9ENTR
          Length = 118

 Score =  108 bits (269), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +T  EL    G   S Q IN   R+E W +  + G+QG KA   H++    +        
Sbjct: 6   LTAKELVGRQGLPSSTQGINAMARRENWLSRKRRGIQG-KALEYHISSIPIDLEEPTVMY 64

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
           E                +      +++  E+    S ++R+G + L+  +
Sbjct: 65  E--APRIYHVKRDEHAHIWQEAYNQLSHDERVAVLSFIMRKGALALIDLI 112


>UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding n=9
           Tax=Enterobacteriaceae RepID=C6CJR2_DICZE
          Length = 136

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T +EL  + G   SRQ +NK  +  GW    + GVQG K     +     E      R E
Sbjct: 13  TTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQG-KGVEYAIWSLPEEVKTTLMR-E 70

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
              +   ++     E   + +  +++  E+ +    +LREG +G+L RL 
Sbjct: 71  TSPDYAVVTPTNVQESTWIQIYHQLSVEERTRLIGHILREGAMGMLARLE 120


>UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae
           RepID=YFED_ECOLI
          Length = 130

 Score =  107 bits (267), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRN------ 54
           MT +ELA   G ++QT+N+W+R++GW T   PGV+GG+ARL+ V+ QV E+I+N      
Sbjct: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67

Query: 55  ---AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                  E +    A    AP    ++     MT +EQ++    L REGI   L RL I 
Sbjct: 68  TPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDID 127

Query: 112 DS 113
           +S
Sbjct: 128 ES 129


>UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-binding n=5
           Tax=Enterobacteriaceae RepID=C2LKG3_PROMI
          Length = 115

 Score =  106 bits (264), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  EL  + G   S Q +N   ++E W    +   QG      H +    E +   E  E
Sbjct: 7   TAMELTGIGGLPKSPQGVNAKAKRESWLKQKRTNKQG-NGVEYHYSCLPEETLIALELYE 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                          V+ V   +++   EQK  T L+LR+GI   L+++   
Sbjct: 66  PLAHYK--LNKEEPLVIWVKAFQQLNDGEQKTVTELILRDGIRSFLEKIVKD 115


>UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding n=31
           Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY
          Length = 115

 Score =  105 bits (262), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 3   PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             ELA L G   S Q IN   ++EGW    + GVQG KA   H+       + + +  E 
Sbjct: 8   AKELAGLEGLPSSPQGINLMAKREGWEQRRRRGVQG-KAVEYHIGSLPITILNSLQLREE 66

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
             +      D     L V      T  E++Q  S + REG   L++RL + 
Sbjct: 67  PAQYATTRQD--PLTLWVEAYYRFTEAEREQVISFIFREGAKSLIERLEMD 115


>UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding protein n=6
           Tax=Enterobacteriaceae RepID=D2BRS4_DICD5
          Length = 140

 Score =  104 bits (260), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP- 58
           T +EL  + G   SRQ +NK  +  GW    + GVQG K     +     E      R  
Sbjct: 7   TTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQG-KGVEYAIWSLPEEVKATLMRAT 65

Query: 59  --------EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                   E   +  + +     E   + +  +++  E+ +    +LREG + +L RL 
Sbjct: 66  LMGTTLMRETAPDYVSAASAGAQEYTWIQIYHQLSAEERTRLIGHILREGAMSVLARLE 124


>UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW40_SODGM
          Length = 127

 Score =  104 bits (260), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +   EL  + G   +RQ +N+  R+EGW    + G +G KA     +    + ++     
Sbjct: 8   IATHELIGVGGLPKTRQGLNRRAREEGWQKRRREGARG-KAVEYSWHSLP-DMVKKTLSL 65

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDS 113
                   LS           + ++++  E+    S ++REG++ LL+RL   D 
Sbjct: 66  RTNPAEYQLSPQ-ETSATWNEIYRQLSDAERDFIVSFIVREGVLNLLKRLDYPDE 119


>UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MKV6_ENTS8
          Length = 129

 Score = 97.9 bits (242), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 10/123 (8%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE- 59
           MT  EL  L+GY+ Q I++W RK GW   P  G +GG A L+ + +QV +Y    ++   
Sbjct: 8   MTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGG-ALLILITQQVYDYFLATDKLRY 66

Query: 60  --------GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                    +  AP ++ D  +    +   + ++P EQ + + L+  EG  GL++RLG+R
Sbjct: 67  SAHLYNRIEETPAPYVTWDNEMMAQFIRTLEMLSPQEQARLSELISEEGAAGLVKRLGLR 126

Query: 112 DSK 114
           D K
Sbjct: 127 DEK 129


>UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8G8Y9_SERP5
          Length = 90

 Score = 96.8 bits (239), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 20  WVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVT 79
             R+EGW +  + GVQG KA   H++        N    + +  +  +    PL V+ + 
Sbjct: 1   MARREGWNSRRRKGVQG-KALEYHIDSLPAGTR-NLLVLKEEPASYQVERKDPL-VVWIE 57

Query: 80  LAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
               +T  E+++  + L+REGI  LL R+    
Sbjct: 58  YYYHLTECEREKVLAFLIREGIGSLLARISADK 90


>UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacteriaceae
           RepID=C4XBN9_KLEPN
          Length = 130

 Score = 95.2 bits (235), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE- 59
           MTP ELA   G +RQTIN+WVR++ W T   PGV+GG+ARLV +++ VRE++ N      
Sbjct: 8   MTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARRH 67

Query: 60  --------GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110
                       A  ++    +   +    + MTP EQ Q   LL REGI G L RLGI
Sbjct: 68  LLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGFLARLGI 126


>UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM
          Length = 728

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 2/104 (1%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           T  ELA   G + + +    R+EGW    KPG  GG   LV                E +
Sbjct: 9   TAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGNEWLVV--SMPEGTALAVRMAEER 66

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLL 105
               A + D P      +     TP++ K+    L R  ++ L 
Sbjct: 67  TAVAAAASDHPPTTSAPSAPGAPTPLDPKRRQQALARLDLVRLY 110


>UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10
          Length = 174

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 3/113 (2%)

Query: 3   PDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             EL  + G  +    I +    E W    + G +G  A   H+N    E  R  +    
Sbjct: 12  AKELEGMPGVPKLATNITRKAVAEDWVKRQRHGGKGV-AYEYHINSLPEETRRAIKGASL 70

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDS 113
             +    S    ++  L+     +TP EQ     ++   GI GL+  +  +D 
Sbjct: 71  SDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAGIKGLMPTIVSKDK 123


>UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0EWA9_9PROT
          Length = 742

 Score = 87.1 bits (214), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 38/115 (33%), Gaps = 15/115 (13%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVR--------- 49
           M   ELA L G   + + I K   +EGW +  +   Q GK      +             
Sbjct: 5   MPASELAGLPGLPGTDRGIRKLADREGWQSRKR---QKGKGLEYSPSSLPEVTRTHLAHL 61

Query: 50  EYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGL 104
                 +    Q E    +   P+E +     +EM   E  +   L+ R GI   
Sbjct: 62  SVKAAMDEVSKQPEYAQYAEAEPVESIPGVKTREMLDEEAAEHRRLIAR-GIAEF 115


>UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM573
           RepID=D2YK71_VIBMI
          Length = 748

 Score = 86.4 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA L G   + + +     KE W   P+     GK    H+     E I +  R  
Sbjct: 7   TSTELAGLPGLPSTDRNVRIKAEKENWEKRPREI---GKGFEYHIRSFPMETIAHLSRD- 62

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL-LREGIIGLLQRLGIRDS 113
                  L   +  E+    L  E+   EQ +   +L   +G + LL  L   D 
Sbjct: 63  ------FLQQKSEGELAAEKLVAELAAKEQAKKRHVLNASQGAMRLLNTLKAEDR 111


>UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5
           Tax=Gammaproteobacteria RepID=C0N301_9GAMM
          Length = 722

 Score = 85.6 bits (210), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 3/92 (3%)

Query: 2   TPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA   G  +  + +N+   K+GW T     V+GG A   H++    E      +  
Sbjct: 10  TATELANKPGLPKYKRGVNQQASKQGWNTRQVK-VRGGSANEYHLSSLPVETQAALIKQH 68

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQ 91
                 + S           L +      QKQ
Sbjct: 69  LPTPVKSSSESTEFSYDPQALWQHYDNKPQKQ 100


>UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336
           RepID=B0UVF4_HAES2
          Length = 145

 Score = 83.3 bits (204), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 8/115 (6%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  EL  + G   + Q I  + +K+ W      GV+G      +V +       +    +
Sbjct: 6   TLKELLDVGGLPSTPQGIILYAKKDKWRRRRVSGVKG-NVFEYYVYDMPESVQTSLGVTK 64

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
                     D   +     L + ++        ++LL  G++ + +RL I   +
Sbjct: 65  ETLALKQELIDDIQKENEKFLNQILSD-----IKNVLLNSGVLRIRERLSITKEE 114


>UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root
           RepID=A4JDI5_BURVG
          Length = 726

 Score = 82.5 bits (202), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 8/111 (7%)

Query: 2   TPDELA--RLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  ELA   L G   + Q +     +E W    +     GK     ++    E       
Sbjct: 10  TAPELAMLGLPGVPTTEQGVRYSATREKWAARRRA---KGKGLEYALDSLPAEAQAAIRH 66

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
                   ++       V+      ++   + ++  +   R+GI+ +L R+
Sbjct: 67  RASAALVTSVPAQPAKAVIRREQQLQLVETDAQRLRAD-ARKGILSILDRI 116


>UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris
           RepID=B8DK74_DESVM
          Length = 732

 Score = 82.5 bits (202), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 14/120 (11%)

Query: 2   TPDELARLTGYS-RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE---- 56
           T  +L  L G S   T+ +   +EGWT+ P+ G  GG      +    +   +       
Sbjct: 9   TTRDLLPLLGISSESTVIRRASREGWTSRPRKGRGGGN--EWLLASMPKSTRKALLDGML 66

Query: 57  ------RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110
                   +     P L    P   +   +   +     +Q    + R  +I  ++RL +
Sbjct: 67  RTAAQEAEKNLPALPPLDAADPRRAIAARM-SPLKHCSNRQREIAMARLALIREVERLAV 125


>UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae
           RepID=Q58ZD8_HAEIN
          Length = 669

 Score = 81.7 bits (200), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%)

Query: 1   MTPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIR-NAER 57
           +T  E+A + G S     +N+  RKE W      GVQGG       +    E       +
Sbjct: 5   VTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGG-GYEYSFSSLPLEVQTEYLLK 63

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
              + +    + D+  + ++ +    +     +Q      R   +  + RL
Sbjct: 64  HSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRFQAVVKVARL 114


>UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS
          Length = 754

 Score = 79.4 bits (194), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  ELA + G S Q I K   +EGW    + G  GGK +L        ++     R    
Sbjct: 14  SAKELAVIMGISWQAIQKRADQEGWPCEMETGR-GGKRKLFRRAVLPVDWQARIARQRAA 72

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
             A A++ ++P           +  +E+++    L++E  +    RL
Sbjct: 73  QAAAAIAPESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARL 119


>UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W3I3_MARMS
          Length = 216

 Score = 77.9 bits (190), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 2   TPDELARLTGYSRQTIN--KWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA   G      N  +  + + W      G++G      H +   +E         
Sbjct: 7   TAAELAGQKGMPAHATNVTRKAKSQNWEYRQITGLRGVN-FEYHASSLPQETQEALGLEG 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREG 100
                 A + D+ +  + +  AK  T  + K  T ++L +G
Sbjct: 66  VSKPVQAENNDSNMVTIQIYSAKAKTWNKAKPETHMVLPKG 106


>UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WSU4_9DELT
          Length = 697

 Score = 77.5 bits (189), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 14/117 (11%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  ELA   G + ++++   ++EGW   P+ G  GGK  L  V+    E          +
Sbjct: 9   STQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGK--LWVVSSMPAEIRDRLASALLR 66

Query: 62  GEAPALSGDAPLEVLLVTLAK---------EMTPVEQKQFTSLLLREGIIGLLQRLG 109
             A  +   A    +   +            ++  E+   T    R      L R+ 
Sbjct: 67  QPAAIIEESAACASIGSNICAPIGTAGNGPALSDRERAIVT---ARLAFCRELDRIA 120


>UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
          RepID=Q9CNL1_PASMU
          Length = 216

 Score = 77.5 bits (189), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 8/88 (9%)

Query: 9  LTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALS 68
          L G S + I K   +EGW    + GV+G K    H         +     + +     ++
Sbjct: 7  LPG-SDKGIVKKAAREGWQKRQRQGVKG-KTFEYHYTSFPIAVQQQLGLYQAEQPHSQVN 64

Query: 69 GDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
                        E++ +E  Q    +
Sbjct: 65 EPRRHYTT------EVSSIENTQTEDHI 86


>UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1
          RepID=A1RM55_SHESW
          Length = 727

 Score = 77.5 bits (189), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 4/73 (5%)

Query: 1  MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          +T  EL        +   + +  ++EGW    + G  GG     H+N       ++    
Sbjct: 6  LTAKELEDFPELPKTESGVIRRAKREGWICRKREGRGGG--FEYHLNSLPLAAQQHILSE 63

Query: 59 EGQGEAPALSGDA 71
          + + +    +  A
Sbjct: 64 KTKAQIAKKTEQA 76


>UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8
          Length = 689

 Score = 77.1 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  ELA L G   + + +     ++ W+   +    G KA   HV+   +E         
Sbjct: 6  SAQELAGLPGVPGTARNVKAMAERKSWSGRRRV---GTKAIEYHVSALPKETRAALLNAA 62

Query: 60 GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
              A           L+ T  +++    ++     L
Sbjct: 63 LGEVATKAVRQETQLALVETNRQQLVADARQGVLHAL 99


>UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinobacillus minor
          NM305 RepID=C5S4R0_9PAST
          Length = 179

 Score = 76.7 bits (187), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  ELA + G   + Q INK  R + W    K GVQGG A   H         +      
Sbjct: 9  SASELAGIQGLPKTPQGINKRARTQNWQKRNKDGVQGG-AVEYHYTSFPENVQQALGFIV 67

Query: 60 GQGEAPALSGDA 71
           Q E    + D 
Sbjct: 68 SQTEHSNQTRDD 79


>UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella enterica
           RepID=B4TBP2_SALHS
          Length = 124

 Score = 75.6 bits (184), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 6/112 (5%)

Query: 2   TPDELARLTGY--SRQTINKWVRK--EGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE- 56
           T  E   L G+  S   + + + K  EG     +  V+  KA   H++       R  + 
Sbjct: 7   TVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVK-SKAEEFHISVFPLYVHRYLDD 65

Query: 57  RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
             E     P    +A  E +   + + +TP ++KQ T      G+  +   L
Sbjct: 66  SGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFL 117


>UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU
          Length = 663

 Score = 74.4 bits (181), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1  MTPDELARLTGYSRQ--TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          ++P E A L G  +    +    +K+GW    + GV+GGKA   + N    E        
Sbjct: 5  VSPKECANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKAIEYNANSLPVEAKAALLLR 64

Query: 59 EGQGE 63
          +G+ E
Sbjct: 65 QGEIE 69


>UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii
           ATCC 33638 RepID=C4U3A5_YERKR
          Length = 73

 Score = 74.4 bits (181), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 33  GVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQF 92
           G+QG K     ++                 E  ++        + +   K++TP E+ +F
Sbjct: 2   GIQG-KGIEYFIDSLPDNVSTYIYHHSELFERISIQ---EHFDIWINAFKQLTPSERYKF 57

Query: 93  TSLLLREGIIGLLQRL 108
           +  +LREGII + + L
Sbjct: 58  SEYILREGIISIYKNL 73


>UniRef50_A7JV32 Possible bacteriophage transcriptional regulator n=1
          Tax=Mannheimia haemolytica PHL213 RepID=A7JV32_PASHA
          Length = 225

 Score = 72.9 bits (177), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 8/89 (8%)

Query: 2  TPDELARLTGYSRQ--TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP- 58
          T  E+A +     Q   + +   K  W      G +G  A   H +       +      
Sbjct: 11 TASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEGKRGV-AFEYHYSSLPISVQQELGFAQ 69

Query: 59 ----EGQGEAPALSGDAPLEVLLVTLAKE 83
              E      A      +E +     + 
Sbjct: 70 TAVKEEPRTLVAAQTADEMERVPFYNVQA 98


>UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JUV9_PASHA
          Length = 176

 Score = 72.5 bits (176), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 13/120 (10%)

Query: 2   TPDELAR----LTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA         ++Q +    +K+GWTT  K GV GG+     ++   +E      R
Sbjct: 11  SAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGV-GGEILEFALSNLPQEIQTEI-R 68

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQK------QFTSLLLR-EGIIGLLQRLGI 110
                            V        +T  +++         + +L  EG +  ++ +  
Sbjct: 69  SRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREIADARMALVAYVLELEGSMSRIKAITY 128


>UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella baltica
          RepID=A9L0K4_SHEB9
          Length = 738

 Score = 72.5 bits (176), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
          +  E+A L     + +    ++E W    + G+ GG     H+N    E  +   + E  
Sbjct: 7  STVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG--FEYHLNSLPLEARQKLAKQE-- 62

Query: 62 GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
           E  A S  + +         +M  V Q +    +
Sbjct: 63 AEQIATSPTSLMRAGSAVAKLQMPAVSQTEKAKSI 97


>UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- RepID=A9MJ52_SALAR
          Length = 124

 Score = 70.6 bits (171), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 2   TPDELARLTGY--SRQTINKWVRK--EGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  E   L G+  S   + + + K  EG     +  ++  KA   H++       R  + 
Sbjct: 7   TVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRLK-SKAEEFHISVFPLYVHRYLDE 65

Query: 58  PEGQGEAPALS-GDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
              +  +  +S  +A  + +   + + +TP ++KQ T L   +G+  +   L
Sbjct: 66  GGEEPVSDHISVQEAEPKDIWEMMFRLLTPEQRKQVTGLFRVKGMKAVFPFL 117


>UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=4
          Tax=Desulfovibrio RepID=Q30W02_DESDG
          Length = 708

 Score = 69.8 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
          T  ELA     +  TI +   +EGW + P+ G  GG      ++               Q
Sbjct: 9  TAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGGN--EWIISSMPEATRTKLLAACAQ 66

Query: 62 GEAPALSGDAPLE 74
           +  AL     L 
Sbjct: 67 DQLDALDRAPKLT 79


>UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213
          RepID=A7JV30_PASHA
          Length = 656

 Score = 69.4 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 8/77 (10%)

Query: 3  PDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA----- 55
            E+A L+G      ++++   KEGW      GV+G      H+     E  +       
Sbjct: 7  AKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGV-TYEYHLTSLPIETQQQLRLNAA 65

Query: 56 ERPEGQGEAPALSGDAP 72
               Q        D P
Sbjct: 66 LAVIPQAAELQPKRDDP 82


>UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
          RepID=A6D441_9VIBR
          Length = 230

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 8/85 (9%)

Query: 3  PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
            EL  L G   S   I +  +++GW +    G    +A   H++    E      R + 
Sbjct: 7  ASELMDLPGMPSSNSGIAQKAKRDGWKSRKTRGQ--SRALEYHISSF-DERDLAELREKY 63

Query: 61 QGEAPALSGDAPLEVLLVTLAKEMT 85
            E      D   E+  V   K+ +
Sbjct: 64 GTEVI---PDNVTEISNVKAIKDFS 85


>UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
          RepID=B8GS44_THISH
          Length = 671

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 4/75 (5%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +   LA L G   ++Q +    +++GW    + G  GG+      +           +  
Sbjct: 10 SAKALAGLPGMPGTQQNVTAKAKRDGWACRKRSGKGGGR--EYAFSSLPIATQAALLKAA 67

Query: 60 GQGEAPALSGDAPLE 74
                A +      
Sbjct: 68 EPAARAARAAQGEPA 82


>UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43
          RepID=A9D2T9_9RHIZ
          Length = 647

 Score = 68.3 bits (165), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 25/85 (29%), Gaps = 8/85 (9%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREYIRNAE 56
          TP E+A   G S + IN+  RK  W         + G  GG     HV+   +       
Sbjct: 6  TPKEIADAAGVSERAINQMARKSHWRHQDQKARKRAGRGGG--WEYHVSLFPQAAQARLM 63

Query: 57 RPEGQGEAPALSG-DAPLEVLLVTL 80
             G       +        L    
Sbjct: 64 VIHGAPANANRNKLADARSKLWARY 88


>UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187
          RepID=C4LBA7_TOLAT
          Length = 741

 Score = 67.5 bits (163), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 24/96 (25%), Gaps = 9/96 (9%)

Query: 3  PDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
            ELA L G  +    + K   +E W    +     GK    H++    E        + 
Sbjct: 7  SSELAGLVGLPQYQDGVRKKADREDWKNRKRES---GKGLEYHISSLPSETRAYL--AKT 61

Query: 61 QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
               A +               +         + +
Sbjct: 62 MASETASAIQD--HAKAGVAMAALADKSAVSVQAKI 95


>UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU
          Length = 174

 Score = 64.8 bits (156), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%)

Query: 8  RLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQV----REYIRNAERPEGQGE 63
           + G S   ++     +GWT   K GV+GGKA    V         + I +         
Sbjct: 5  GMPG-SVAGVHYRANVQGWTKQKKEGVKGGKAVEYDVMSMPTKEREQVIAHLGLSTPDTG 63

Query: 64 APALSGDA------PLEVLLVTLAKEMTPVEQKQ 91
          A A            L   L+ + +E+ P E ++
Sbjct: 64 AQANEKQDSSELINKLTTTLINMIEELEPDEARK 97


>UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2
          Length = 662

 Score = 64.4 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 2   TPDELARLTGY----SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  EL  L       +++ +    ++E W +  + G  GG      ++   +E      R
Sbjct: 9   SAQELIGLQLVILPTTKKAVIDKAKRENWQSRKRVGRGGG--VEYALSSLPQEVQEEI-R 65

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
            +      A        VL   + +++T  +++   + +
Sbjct: 66  DKFATSVVAGKPKKLP-VLKSVVLEDLTEKQRQAADARM 103


>UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillus minor NM305
          RepID=C5S4Q8_9PAST
          Length = 663

 Score = 60.9 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  +LA + G   S Q +NK  R+E W    + G Q GKA   H++    E  +      
Sbjct: 6  SASDLAGVKGMPSSPQGVNKKARQELWQKQQQIGKQ-GKAFEYHISSLPPETQQALRLQA 64

Query: 60 GQGEAPALS 68
               P   
Sbjct: 65 ALAVVPIAE 73


>UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneidensis
           RepID=Q8EJ30_SHEON
          Length = 715

 Score = 60.2 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 13/116 (11%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE--- 56
           +P EL +L G   + Q I    + E W +  K    G K    H+         +     
Sbjct: 7   SPQELLQLPGMPTTVQGIRFKAKTESWESRKKE---GSKGFEYHLGSLPPITQAHLRQQA 63

Query: 57  -----RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQR 107
                  E       ++  A   V    L ++   + + +    + R+ ++  +  
Sbjct: 64  VKNTTSREVAAARQLIATPASQLVKKTELQQQFLTLPKAKQQVAMERQLLLNDMAN 119


>UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus influenzae
           RepID=Q58ZE0_HAEIN
          Length = 166

 Score = 60.2 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 3   PDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP-- 58
           P +LA L   S     + +  ++EGW      G++GG     H +       +       
Sbjct: 10  PRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGG-GFEYHYSSLPPAVQQALGFKPN 68

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQK 90
           E + E    +        +  +   ++ +E K
Sbjct: 69  EAKKEPLPAARVGERLKEIDRIMAAISSLEAK 100


>UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas sp. JS666
          RepID=Q125Z1_POLSJ
          Length = 772

 Score = 57.5 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 1  MTPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA 55
          +T +EL  L      ++ +++     GW      G  GG  R  HV           
Sbjct: 9  LTANELLGLPNMPADKRGVHRKALASGWQYREVAG-NGGTRREYHVASLPATTRAAL 64


>UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI0001699232
          Length = 150

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +T  ELA L G   + +++N+   +       K     GK     +     E  R   R 
Sbjct: 5   LTAAELAGLPGMPGTPRSVNRAGDRGEIERRKKA---KGKGWEYSLTSLPAETQRYLTRT 61

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQ-RLG 109
                A A     P   + + L  ++T  +++Q  + L    +I  L  RLG
Sbjct: 62  AAAEIAKAAPP-QPPAPIELPLMPDLTDWQREQMHARLAVLSVIDELAQRLG 112


>UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae
           RepID=TRA_HAEIN
          Length = 687

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 8/113 (7%)

Query: 2   TPDELARLTGYS----RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA L   +     + I +  ++E W +  + G  GG      +     E       
Sbjct: 11  SVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGRGGG--LEYELASLPIEVQNELLL 68

Query: 58  PE--GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
                Q        +    +    + +       K      ++ G +  +  L
Sbjct: 69  KTTPEQTAVALQKIEETRPLASNEVWQLWDEASAKAQEQAKIKLGTMFAVANL 121


>UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisseriaceae
          RepID=C0DX48_EIKCO
          Length = 548

 Score = 54.4 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 6/74 (8%)

Query: 1  MTPDELARL----TGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE 56
          ++  ELA+L       + + I+   ++E W    +    GG      V     E      
Sbjct: 8  LSAAELAQLSIPSLPKTPKGISDKAKREYWPNRRRAQRGGG--VEYQVAGLPEEIQAAVR 65

Query: 57 RPEGQGEAPALSGD 70
            + +         
Sbjct: 66 ERQAEQLLAQSQPA 79


>UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FD28_DESAA
          Length = 682

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQ-GGKARLVHVNEQVREYIRNAERPE 59
           +T  +LA++ G  R T+ +  +KEGW        Q GG  +L H N       R     E
Sbjct: 7   VTCSQLAQVIGQHRSTVLRRAQKEGWAFHEIANRQGGGHQKLYHFNSLPMSIQRAIIEKE 66

Query: 60  GQGEA--PALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
              +   PA   ++ L       A     +++      +L 
Sbjct: 67  LNAQDNGPAPPPESVLTQSSELAAAPGWNMDRAYARRAILE 107


>UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria RepID=D2TQ32_CITRO
          Length = 695

 Score = 52.1 bits (123), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 21/125 (16%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE--- 56
           +  EL  L G   + Q +   +RK   + + +   +G K     ++       +      
Sbjct: 4   SVKELVGLPGMPGTEQGVRYSIRKYATSETSRRRQEGTKGFEYSIDCLPEVTQQALRERY 63

Query: 57  --------RPEGQGEAPALSGDAPLEVLLVTLAK--------EMTPVEQKQFTSLLLREG 100
                     E        +  +P  V  V   +         +  + +KQ      R  
Sbjct: 64  ALQLMTQKADESPAPVVTKARRSPDVVDAVEAYRGSPQLMVERLNALTEKQRQVADARIA 123

Query: 101 IIGLL 105
           I+  +
Sbjct: 124 IVSEV 128


>UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6
           RepID=A4EV07_9RHOB
          Length = 210

 Score = 50.9 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 21/111 (18%)

Query: 2   TPDELA-----RLTGYSRQTINKWVRKEGWTTSP-----KPGVQGGKARLVHVNEQVREY 51
           +  +LA      L G + + +N    ++GW   P     +PG  GG     H +    + 
Sbjct: 13  SAKDLASAKLPGLPG-TVRGVNLVAERKGWAKQPNAIKHRPGRSGG--LFYHWSILPLKT 69

Query: 52  IRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII 102
                +         L    P  +           + QK  T  + R+  +
Sbjct: 70  RLRLLKD--------LEKQEPQRLERGEAWAIYEGLSQKAKTEAITRQDAL 112


>UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae RepID=A3VYG1_9RHOB
          Length = 707

 Score = 50.9 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 28/106 (26%), Gaps = 13/106 (12%)

Query: 2   TPDELA--RLTGY--SRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREYI 52
           +  +LA   L     +++ IN    +EGW         + G  GG     H +       
Sbjct: 12  SAADLAEAGLPDLPGTKRKINLLAEREGWARHAGKVRRRKGAGGG--VEYHWSLLPIRAR 69

Query: 53  RNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
                      A     D   E      A +    E +     +  
Sbjct: 70  MRLSADLVNSPAARPGKDEAWER--YAAAGDKARTEAEARLEAIAE 113


>UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112
          RepID=Q38452_BPD31
          Length = 48

 Score = 50.5 bits (119), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 3  PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHV 44
          P +LA L G   + + + K   +EGW      G  GG     HV
Sbjct: 7  PTKLAGLPGLPTTDRGVRKLAEREGWKKQKHSGRGGG--YEYHV 48


>UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkenivorans AK-01
          RepID=B8FGN6_DESAA
          Length = 653

 Score = 48.6 bits (114), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          T  E+A+  G + +++ +   KEGW         G K    H +        +  +
Sbjct: 7  TAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAH-SGLPIPVQASLLK 61


>UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Enterobacteriaceae
           RepID=B7UGE5_ECO27
          Length = 680

 Score = 48.6 bits (114), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 31/123 (25%)

Query: 2   TPDELARLTGY--SRQTINKWVRK-----EGWTTSPKPGVQGGKARLVHVNEQVREYI-- 52
           + +ELA L G   + Q +   + +       W    +    G KA   H++    E    
Sbjct: 4   SANELAGLPGLPGTVQGVRWTLNRITETHPEW-KRKRE---GTKAFEYHIDCLPAEAQKV 59

Query: 53  ------------RNAERPEGQGEAPALSGDAPLEV------LLVTLAKEMTPVEQKQFTS 94
                               Q     ++    LEV      L +   + +T  ++    +
Sbjct: 60  LRKRLTHQVLEDAQLPAVVEQKAVKNVAVRDELEVMVKCPELALREVQSLTDKQKAIADA 119

Query: 95  LLL 97
            +L
Sbjct: 120 RIL 122


>UniRef50_Q32IA5 Putative uncharacterized protein n=1 Tax=Shigella dysenteriae Sd197
           RepID=Q32IA5_SHIDS
          Length = 135

 Score = 48.2 bits (113), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 12/115 (10%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           ++ +EL  L G   + Q +   ++K   +   +    G K     ++       +     
Sbjct: 3   VSVNELVGLPGMPGTAQGVRYSIKKRASSEHFRRKRAGSKTIEYSIDCLPPITQQALRER 62

Query: 59  EGQGEAPALSGDAPLEVLL------VTLAKEMTPVEQKQFTSLLLREGIIGLLQR 107
                   L    P E+              + PVE  + +  L+ E +  L + 
Sbjct: 63  ----HVAQLMATDPQEITTQPPVKRERKQNVVQPVEAYRGSPQLVEERLNALTEN 113


>UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GNK0_VIBCH
          Length = 684

 Score = 48.2 bits (113), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 23/95 (24%), Gaps = 7/95 (7%)

Query: 2  TPDELARLTGYSRQTINKWVRKE----GWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          T  E+          +      +          +   QG KA    ++    E      R
Sbjct: 4  TAKEIMGAPLMPSSDVRTRGNLDRLTANKPEQKRK-RQGSKAFEYQIDCLPEETRLYLLR 62

Query: 58 --PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQK 90
             + Q E    S +    V   +    +   E  
Sbjct: 63 DIAKQQTEQAESSRNTRQVVTPASDELWLEYEEAT 97


>UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D935_LARHH
          Length = 241

 Score = 48.2 bits (113), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 13/118 (11%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP-- 58
           +   ++A L   + + I     ++GW    K     GK     +    +E      R   
Sbjct: 14  LAAMKIAGLPA-TERGIRLCAERDGWQWQRK---NKGKGFEYAITSLPQEAQAEIRRRQA 69

Query: 59  ----EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQ---KQFTSLLLREGIIGLLQRLG 109
               E    +  L G          L   +T VE+   KQ      R  ++G +++L 
Sbjct: 70  QELLESSAASITLPGKGRSARREEQLNLTLTTVERLTSKQRAVAEARCALVGEVRKLS 127


>UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 12804
           RepID=A9ICZ8_BORPD
          Length = 653

 Score = 48.2 bits (113), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 29/103 (28%), Gaps = 8/103 (7%)

Query: 3   PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             ELA L     + Q IN   +   W + P+ G      R         E      +   
Sbjct: 8   AQELAGLPAMPATVQGINHRAKTSAWQSRPRAGRG--GGREYAFASLPVETQAALLKRTT 65

Query: 61  QGEAPALSGDAPLEVLLVTLA----KEMTPVEQKQFTSLLLRE 99
                  +  AP    L        + +     ++ ++L   E
Sbjct: 66  PAAPARPAPAAPDRAGLWEAYERRPQTLKDEAARRLSALQAVE 108


>UniRef50_UPI0001905178 hypothetical protein RetlG_31223 n=1 Tax=Rhizobium etli GR56
          RepID=UPI0001905178
          Length = 105

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 20/71 (28%), Gaps = 9/71 (12%)

Query: 1  MTPDELARL----TGYSRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREY 51
          +T  EL  L       S     K  + EGW +         G +GG     HV+   +  
Sbjct: 5  LTFGELLALSLPELPISLSGFAKRAKAEGWKSNPALFRKAEGREGGGGFAYHVSLLPKVA 64

Query: 52 IRNAERPEGQG 62
                     
Sbjct: 65 QARLAMISAGT 75


>UniRef50_A9LZ01 Bacteriophage transposase n=11 Tax=Neisseriaceae RepID=A9LZ01_NEIM0
          Length = 662

 Score = 47.5 bits (111), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 6/99 (6%)

Query: 1   MTPDELA--RLTGY--SRQTINKWVRKEGWTTSPKPGV-QGGKARLVHVNEQVREYIRNA 55
           +T  EL    + G   + + + +  + + W    + G  +GG+ +   +     E     
Sbjct: 3   ITIGELLKLNIQGLPTTARGLRERAKTQNWPYIEEVGKARGGRLKKYLIASLPAEIRAAI 62

Query: 56  ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTS 94
            + +   E          +V   T        E  +  +
Sbjct: 63  MKRQSD-ELTEKMPKTLPQVRPGTAMSAQALAEAAKLLN 100


>UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IMZ2_RHOCS
          Length = 191

 Score = 47.1 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 6/90 (6%)

Query: 2   TPDELAR--LTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA   L G   ++  I +  R E W      G  G +    HV             
Sbjct: 45  SAAELAGVRLPGLPATKAGITRLARAEAWRVREVHGRGGIR-FEYHVTSLPPRAFDQLIA 103

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPV 87
              +   P    +     L       +   
Sbjct: 104 LIVE-AIPEPEPERIELRLPAAPRPVLADD 132


>UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=A8I7J2_AZOC5
          Length = 725

 Score = 47.1 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 30/101 (29%), Gaps = 7/101 (6%)

Query: 2   TPDELARLT----GYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  E+A L       S + + K   ++ W +  +    GG+     ++            
Sbjct: 6   TAAEIAGLGLPDIPESERGVRKMAGRDAWPSREREASGGGR--EYPLSALPTAARAAYVA 63

Query: 58  PEGQG-EAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLL 97
              Q  + P     A        LA      ++    ++L 
Sbjct: 64  RHLQALDVPVEVVRAAASEPEAELAAPAALDQRDGRLAILA 104


>UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A5F224_VIBC3
          Length = 667

 Score = 46.7 bits (109), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 1  MTPDELARLTGYS---RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          +T  E A + G+        N+ V+        +   +G KA   H++    +      +
Sbjct: 3  VTAKECAGVGGFPTDKNNARNRLVKLASGQPDMQRKREGTKAFEFHISILPPQTQAALLK 62


>UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2WA75_MAGSA
          Length = 733

 Score = 46.3 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 25/102 (24%), Gaps = 11/102 (10%)

Query: 8   RLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPAL 67
            +   S + ++   +   W   P+    GG     H+     E            EA   
Sbjct: 22  DMMPLSGRRLSDHAKASNWPCRPRTKSGGG--VEYHITALPVEARL-LISRHELAEAVQA 78

Query: 68  SGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                +  +L               + L  R   +    RL 
Sbjct: 79  GRAEGMRAVLQETM--------DARSKLAARTAGLAEFMRLS 112


>UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W6I7_MAGSA
          Length = 193

 Score = 45.5 bits (106), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 2   TPDEL--ARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  EL   RL G   S+  + +  R++GWTT   P  QGG+    H     R   +    
Sbjct: 48  TAAELVALRLPGLPTSKAAVTRIAREQGWTTEKVP-CQGGERHAYHFTSLPRRAFQGLID 106

Query: 58  PEGQGEAPALSGDA 71
                   A++   
Sbjct: 107 MVLAPPPGAVAPVD 120


>UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rhodospirillum
          centenum SW RepID=B6ISS2_RHOCS
          Length = 710

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 6/86 (6%)

Query: 2  TPDELARLT----GYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          T  ELA L       + + I     + GW +  +    GG+     ++    E      R
Sbjct: 6  TAAELADLQLPAIASTERGIRGQATRGGWESRQRAARGGGR--EYPLSALPEEARLELAR 63

Query: 58 PEGQGEAPALSGDAPLEVLLVTLAKE 83
                        P    +    + 
Sbjct: 64 RAAAEAGDYEKPTPPKRKSVGPAPQN 89


>UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flexneri
           RepID=Q0T6N1_SHIF8
          Length = 169

 Score = 44.8 bits (104), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 17/109 (15%)

Query: 1   MTPD---ELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           MTP    EL  + G + Q ++K  +KEGW    + G +G                     
Sbjct: 11  MTPKQITELDGMPG-TIQGVHKRAKKEGWPKRSQEGRRG-PGVEY------------IPA 56

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQ 106
                +      +A    +   L  ++   E ++    + + G+ GL+Q
Sbjct: 57  IPAMQKIAIEEMNADTLKMFSLLINKLGENEVREIELNMAKYGLSGLMQ 105


>UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobacteraceae bacterium
           KLH11 RepID=B9NM75_9RHOB
          Length = 531

 Score = 43.2 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 33/122 (27%), Gaps = 19/122 (15%)

Query: 2   TPDEL--ARLTGY--SRQTINKWVRKEGWT-----TSPKPGVQGGKARLVHVNEQVREYI 52
           T  E+  ARL     +++ +  + ++  W         + G  GG     +         
Sbjct: 13  TATEIGEARLPDMPSTQKGVELFAKRSDWRSHPEWCRQRSGKGGG--WEYNWQLFPVASR 70

Query: 53  RNAERPEGQG------EAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLL--REGIIGL 104
           R                 P L+        L    K    + +K    +L   R G+   
Sbjct: 71  RKLLNDARLPNRDRVDAVPDLADLQAYYESLPEAVKAKAQLRKKVLCEVLANERSGLTRF 130

Query: 105 LQ 106
             
Sbjct: 131 FA 132


>UniRef50_B1JIP4 Transposase-like Mu n=4 Tax=Gammaproteobacteria
          RepID=B1JIP4_YERPY
          Length = 684

 Score = 42.8 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 14/105 (13%)

Query: 1  MTPDELARLTGYS------RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRN 54
          ++ +EL  L G        R  +NK           +    G KA   H++    E  +N
Sbjct: 3  LSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRA---GTKAFEYHIDCL-TEQQQN 58

Query: 55 AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLRE 99
            R             A           ++ P  + +    L+R+
Sbjct: 59 VVRERHLNSLLNAEKKAVKTA----FNGDLNPRVKAKHELDLMRQ 99


>UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotrophicus ES-1
           RepID=C6P2B9_9PROT
          Length = 704

 Score = 42.8 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 18/120 (15%)

Query: 4   DELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQG- 62
             +A   G ++ +      +E W    +    G K RL  ++           R   +  
Sbjct: 8   KTIAVALGVAKSSACDRANREVWPFVEQAARGGQK-RLYPLSTLPMPVREAILRHTLKQN 66

Query: 63  -------------EAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                         A A +  AP   + + ++ E+   ++K       R  II  ++RL 
Sbjct: 67  QPAGVSTISPAVSSAVAPNTTAPFYPVALPVSHELKDWQRKTAE---ARSAIIAEIKRLS 123


>UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomonas palustris TIE-1
           RepID=B3QCJ2_RHOPT
          Length = 724

 Score = 42.8 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 8/115 (6%)

Query: 2   TPDELAR--LTGY--SRQTINKWVRKEGWT---TSPKPGVQGGKARLVHVNEQVREYIRN 54
           T  ELA   L G   +   + ++  +EGW       +     G     +++         
Sbjct: 6   TARELAEAQLPGLPSTESALIRFAGREGWNDSLAYVRRRSGRGGGLEYNISLLPPSARVE 65

Query: 55  AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
            ER      AP     +           E    E+    +++      G  QRLG
Sbjct: 66  FERRHRAILAPQPVEAS-TAAQPAENLSERAAKERDARLAIVAAFAAFGRGQRLG 119


>UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147
           RepID=C4GJU9_9NEIS
          Length = 756

 Score = 42.1 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 12/114 (10%)

Query: 7   ARLTGYSRQTINKWVRKEGWTTSPKP--GVQGGKARLVHVNEQVREYIRNAERPEGQGEA 64
             +   + Q +    +KE W     P  G +GG  R           +    +       
Sbjct: 16  LEILPNTVQGLYYKAKKENWLFRETPCQGGKGGVKREYA---LPPAVLDAIWQRRAAAAV 72

Query: 65  PALSGDAPLEVLLVTLAK-------EMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
              +   P   +     +        +      Q      R G++ L++R+   
Sbjct: 73  AEGAYGQPEPCVAGAAYQGEVLDAGRLNGSTAAQRGREGARIGVLRLVERIMAE 126


>UniRef50_B0P6Z0 Putative uncharacterized protein n=2 Tax=Clostridiales
          RepID=B0P6Z0_9FIRM
          Length = 657

 Score = 40.9 bits (94), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 1  MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
          ++  E+A L G S Q I +  + E           G    +  V E   +        + 
Sbjct: 5  LSTAEVASLKGCSTQYIRRLAKTEKLKGRKCLNADGSPGWMFLVEELPAKLQEKYYN-QL 63

Query: 61 QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQF 92
          +   P  S     +          T  EQ++ 
Sbjct: 64 RANLPEASFPDEAKPKAAKPLDSYTAGEQEEI 95


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobac...    98   1e-19
UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Ent...    95   5e-19
UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding...    94   1e-18
UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-bindin...    93   3e-18
UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding...    92   7e-18
UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Provide...    91   9e-18
UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding...    89   3e-17
UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding...    88   8e-17
UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding...    88   1e-16
UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis...    87   2e-16
UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobact...    86   3e-16
UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=...    86   4e-16
UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Hae...    84   2e-15
UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronoba...    83   4e-15
UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10     83   4e-15
UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5 Tax...    80   2e-14
UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serrati...    80   2e-14
UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacter...    79   6e-14
UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinom...    78   7e-14
UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=M...    77   2e-13
UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM5...    77   2e-13
UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-bindin...    75   7e-13
UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella s...    73   3e-12
UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgar...    73   3e-12
UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB...    72   5e-12
UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemoph...    72   6e-12
UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella...    71   8e-12
UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneiden...    71   1e-11
UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU                70   2e-11
UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmone...    70   2e-11
UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfo...    69   5e-11
UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinob...    69   5e-11
UniRef50_A7JV32 Possible bacteriophage transcriptional regulator...    69   6e-11
UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum al...    68   9e-11
UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteur...    68   9e-11
UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8          67   1e-10
UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-Eb...    67   2e-10
UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas aue...    66   3e-10
UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella ba...    66   3e-10
UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=...    66   4e-10
UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia hae...    66   4e-10
UniRef50_Q32IA5 Putative uncharacterized protein n=1 Tax=Shigell...    66   5e-10
UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolyt...    65   6e-10
UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pas...    65   7e-10
UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria R...    64   1e-09
UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae Rep...    64   1e-09
UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=...    63   2e-09
UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersin...    63   3e-09
UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototroph...    62   4e-09
UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas ...    60   2e-08
UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkeniv...    59   3e-08
UniRef50_A9LZ01 Bacteriophage transposase n=11 Tax=Neisseriaceae...    59   3e-08
UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio ...    59   4e-08
UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisser...    59   5e-08
UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flex...    58   9e-08
UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus in...    58   1e-07
UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongens...    58   1e-07
UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU      57   2e-07
UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillu...    57   2e-07
UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 Re...    57   2e-07
UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseoba...    56   5e-07
UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Ente...    55   8e-07
UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A...    55   9e-07
UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 1280...    54   1e-06
UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae R...    54   2e-06
UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=M...    53   3e-06
UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=...    53   3e-06
UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magneto...    52   7e-06
UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum ...    51   9e-06
UniRef50_UPI0001905178 hypothetical protein RetlG_31223 n=1 Tax=...    51   1e-05
UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rh...    50   3e-05
UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage...    49   4e-05

Sequences not found previously or not previously below threshold:

UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotr...    46   4e-04
UniRef50_B1JIP4 Transposase-like Mu n=4 Tax=Gammaproteobacteria ...    45   7e-04
UniRef50_Q82XF6 Putative uncharacterized protein n=1 Tax=Nitroso...    43   0.003
UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomo...    42   0.007
UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingell...    41   0.009
UniRef50_A3YA61 Prophage MuSo2, transcriptional regulator, Cro/C...    41   0.012
UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobactera...    41   0.014
UniRef50_C6XCG7 Putative phage repressor n=1 Tax=Methylovorus sp...    40   0.022
UniRef50_B9JYF3 Transposase protein n=3 Tax=Rhizobiales RepID=B9...    40   0.023

>UniRef50_P0AD38 Uncharacterized protein yfeC n=111 Tax=Enterobacteriaceae
           RepID=YFEC_ECOL6
          Length = 114

 Score = 97.5 bits (241), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
           MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG
Sbjct: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
           QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
Sbjct: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114


>UniRef50_C4K715 Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae
           RepID=C4K715_HAMD5
          Length = 115

 Score = 95.2 bits (235), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 2   TPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +  EL    G     Q IN+  R++GW    + GVQG KA   H++   +  ++   R +
Sbjct: 7   SAKELIHSPGLPSSTQGINQMARRQGWKHRRRLGVQG-KALEYHIDSLPKPILKQL-RLK 64

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
              E  +L+   P   + +   +++T  E+++  + L REGI GL++RL   
Sbjct: 65  EDAEKYSLNQQDP-FTIWIEAYRQLTDSEREKLIAFLFREGIQGLIKRLSND 115


>UniRef50_C5B7F4 MuA-transposase/repressor protein CI DNA-binding n=2
           Tax=Edwardsiella RepID=C5B7F4_EDWI9
          Length = 114

 Score = 94.1 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +  ELA + G+  + Q IN+  + EGW    + GVQG KA   H++    E +      +
Sbjct: 7   SAKELAGIGGFPSTPQAINQRAKSEGWRRQRRSGVQG-KAVEYHISCFPPEVVDELLARD 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
            Q +    S     E +  ++  +M+  E+K+ TSL+LR GI   L+RLG
Sbjct: 66  EQAQYLISSNQ--PEKVWYSILLQMSEEERKKVTSLILRIGINEFLRRLG 113


>UniRef50_C2LKG3 MuA-transposase/repressor protein CI, DNA-binding n=5
           Tax=Enterobacteriaceae RepID=C2LKG3_PROMI
          Length = 115

 Score = 92.9 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 2   TPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  EL  + G     Q +N   ++E W    +   QG      H +    E +   E  E
Sbjct: 7   TAMELTGIGGLPKSPQGVNAKAKRESWLKQKRTNKQG-NGVEYHYSCLPEETLIALELYE 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                          V+ V   +++   EQK  T L+LR+GI   L+++   
Sbjct: 66  PLAHYKL--NKEEPLVIWVKAFQQLNDGEQKTVTELILRDGIRSFLEKIVKD 115


>UniRef50_C6CJR2 MuA-transposase/repressor protein CI DNA-binding n=9
           Tax=Enterobacteriaceae RepID=C6CJR2_DICZE
          Length = 136

 Score = 91.8 bits (226), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 2   TPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T +EL  + G  +  Q +NK  +  GW    + GVQG K     +     E      R E
Sbjct: 13  TTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQG-KGVEYAIWSLPEEVKTTLMR-E 70

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
              +   ++     E   + +  +++  E+ +    +LREG +G+L RL     +
Sbjct: 71  TSPDYAVVTPTNVQESTWIQIYHQLSVEERTRLIGHILREGAMGMLARLENGPRE 125


>UniRef50_B6XCH8 Putative uncharacterized protein n=3 Tax=Providencia
           RepID=B6XCH8_9ENTR
          Length = 118

 Score = 91.4 bits (225), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 1   MTPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +T  EL    G     Q IN   R+E W +  + G+QG KA   H++    +        
Sbjct: 6   LTAKELVGRQGLPSSTQGINAMARRENWLSRKRRGIQG-KALEYHISSIPIDLEEPTVMY 64

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
           E                +      +++  E+    S ++R+G + L+  +
Sbjct: 65  E--APRIYHVKRDEHAHIWQEAYNQLSHDERVAVLSFIMRKGALALIDLI 112


>UniRef50_B1JMJ9 MuA-transposase/repressor protein CI DNA-binding n=31
           Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY
          Length = 115

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 3   PDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             ELA L G     Q IN   ++EGW    + GVQG KA   H+       + + +  E 
Sbjct: 8   AKELAGLEGLPSSPQGINLMAKREGWEQRRRRGVQG-KAVEYHIGSLPITILNSLQLREE 66

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
             +      D     L V      T  E++Q  S + REG   L++RL + 
Sbjct: 67  PAQYATTRQD--PLTLWVEAYYRFTEAEREQVISFIFREGAKSLIERLEMD 115


>UniRef50_D2BRS4 MuA-transposase/repressor protein CI DNA-binding protein n=6
           Tax=Enterobacteriaceae RepID=D2BRS4_DICD5
          Length = 140

 Score = 88.3 bits (217), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 12/119 (10%)

Query: 2   TPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER-- 57
           T +EL  + G  +  Q +NK  +  GW    + GVQG K     +     E      R  
Sbjct: 7   TTNELLGVAGLPKSRQGLNKKAKDHGWERRRRKGVQG-KGVEYAIWSLPEEVKATLMRAT 65

Query: 58  -------PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                   E   +  + +     E   + +  +++  E+ +    +LREG + +L RL 
Sbjct: 66  LMGTTLMRETAPDYVSAASAGAQEYTWIQIYHQLSAEERTRLIGHILREGAMSVLARLE 124


>UniRef50_A8GHQ2 MuA-transposase/repressor protein CI DNA-binding n=3
           Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5
          Length = 116

 Score = 87.5 bits (215), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 5/112 (4%)

Query: 3   PDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             EL  + G     Q IN   R+EGW +  + GVQG KA   H+N        +    + 
Sbjct: 8   ARELTGIAGLPSSPQGINLMARREGWISRRRKGVQG-KAVEYHINSLPIGAR-SLLVLQE 65

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
                 L    PL V  V     ++  E+++  + L+REGI  LL  +   +
Sbjct: 66  DPAEYQLERQDPLAV-WVEYYYHLSESEREKVLTFLMREGIDSLLALIAAEE 116


>UniRef50_Q2NW40 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NW40_SODGM
          Length = 127

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 5/115 (4%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +   EL  + G   +RQ +N+  R+EGW    + G +G KA     +       +     
Sbjct: 8   IATHELIGVGGLPKTRQGLNRRAREEGWQKRRREGARG-KAVEYSWHSLPDMVKKTL-SL 65

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDS 113
                   LS           + ++++  E+    S ++REG++ LL+RL   D 
Sbjct: 66  RTNPAEYQLSPQ-ETSATWNEIYRQLSDAERDFIVSFIVREGVLNLLKRLDYPDE 119


>UniRef50_P27238 Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae
           RepID=YFED_ECOLI
          Length = 130

 Score = 86.0 bits (211), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRN------ 54
           MT +ELA   G ++QT+N+W+R++GW T   PGV+GG+ARL+ V+ QV E+I+N      
Sbjct: 8   MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN 67

Query: 55  ---AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
                  E +    A    AP    ++     MT +EQ++    L REGI   L RL I 
Sbjct: 68  TPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDID 127

Query: 112 DS 113
           +S
Sbjct: 128 ES 129


>UniRef50_B8DLF1 Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM
          Length = 728

 Score = 85.6 bits (210), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 2/104 (1%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           T  ELA   G + + +    R+EGW    KPG  GG      V              E +
Sbjct: 9   TAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGN--EWLVVSMPEGTALAVRMAEER 66

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLL 105
               A + D P      +     TP++ K+    L R  ++ L 
Sbjct: 67  TAVAAAASDHPPTTSAPSAPGAPTPLDPKRRQQALARLDLVRLY 110


>UniRef50_Q58ZD8 MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae
           RepID=Q58ZD8_HAEIN
          Length = 669

 Score = 83.7 bits (205), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 4/115 (3%)

Query: 1   MTPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIR-NAER 57
           +T  E+A + G S     +N+  RKE W      GVQGG       +    E       +
Sbjct: 5   VTAKEIAGIGGLSKHPTNVNRLARKEKWIFREIQGVQGG-GYEYSFSSLPLEVQTEYLLK 63

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
              + +    + D+  + ++ +    +     +Q      R   +  + RL    
Sbjct: 64  HSEELKVNKENNDSNQQTMIESAWNVLASATFEQEKRAERRFQAVVKVARLVENK 118


>UniRef50_A7MKV6 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MKV6_ENTS8
          Length = 129

 Score = 82.5 bits (202), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGG--------KARLVHVNEQVREYI 52
           MT  EL  L+GY+ Q I++W RK GW   P  G +GG        +     +      Y 
Sbjct: 8   MTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGGALLILITQQVYDYFLATDKLRYS 67

Query: 53  RNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
            +      +  AP ++ D  +    +   + ++P EQ + + L+  EG  GL++RLG+RD
Sbjct: 68  AHLYNRIEETPAPYVTWDNEMMAQFIRTLEMLSPQEQARLSELISEEGAAGLVKRLGLRD 127

Query: 113 SK 114
            K
Sbjct: 128 EK 129


>UniRef50_P07040 Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10
          Length = 174

 Score = 82.5 bits (202), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 3/113 (2%)

Query: 3   PDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             EL  + G  +    I +    E W    + G +G  A   H+N    E  R  +    
Sbjct: 12  AKELEGMPGVPKLATNITRKAVAEDWVKRQRHGGKGV-AYEYHINSLPEETRRAIKGASL 70

Query: 61  QGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDS 113
             +    S    ++  L+     +TP EQ     ++   GI GL+  +  +D 
Sbjct: 71  SDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAGIKGLMPTIVSKDK 123


>UniRef50_C0N301 Mu DNA binding, I gamma subdomain family n=5
           Tax=Gammaproteobacteria RepID=C0N301_9GAMM
          Length = 722

 Score = 80.2 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 3/110 (2%)

Query: 2   TPDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA   G  +  + +N+   K+GW T     V+GG A   H++    E      +  
Sbjct: 10  TATELANKPGLPKYKRGVNQQASKQGWNTRQVK-VRGGSANEYHLSSLPVETQAALIKQH 68

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                 + S           L +      QKQ  +   +  ++  +  L 
Sbjct: 69  LPTPVKSSSESTEFSYDPQALWQHYDNKPQKQKDAAQNKLNLLLQVMALT 118


>UniRef50_A8G8Y9 Putative uncharacterized protein n=1 Tax=Serratia proteamaculans
           568 RepID=A8G8Y9_SERP5
          Length = 90

 Score = 80.2 bits (196), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 20  WVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVT 79
             R+EGW +  + GVQG KA   H++        N    + +  +  +    P  V+ + 
Sbjct: 1   MARREGWNSRRRKGVQG-KALEYHIDSLPAGTR-NLLVLKEEPASYQVERKDP-LVVWIE 57

Query: 80  LAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
               +T  E+++  + L+REGI  LL R+    
Sbjct: 58  YYYHLTECEREKVLAFLIREGIGSLLARISADK 90


>UniRef50_C4XBN9 Putative negative regulator n=7 Tax=Enterobacteriaceae
           RepID=C4XBN9_KLEPN
          Length = 130

 Score = 78.7 bits (192), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 65/119 (54%), Gaps = 9/119 (7%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE- 59
           MTP ELA   G +RQTIN+WVR++ W T   PGV+GG+ARLV +++ VRE++ N      
Sbjct: 8   MTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARRH 67

Query: 60  --------GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110
                       A  ++    +   +    + MTP EQ Q   LL REGI G L RLGI
Sbjct: 68  LLTDNHLAESPGAYLVNEADAIWRQITETLQLMTPAEQLQLRDLLAREGISGFLARLGI 126


>UniRef50_A6W3I3 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1
           RepID=A6W3I3_MARMS
          Length = 216

 Score = 78.3 bits (191), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 3/101 (2%)

Query: 2   TPDELARLTGYSRQT--INKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA   G       + +  + + W      G++G      H +   +E         
Sbjct: 7   TAAELAGQKGMPAHATNVTRKAKSQNWEYRQITGLRGVN-FEYHASSLPQETQEALGLEG 65

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREG 100
                 A + D+ +  + +  AK  T  + K  T ++L +G
Sbjct: 66  VSKPVQAENNDSNMVTIQIYSAKAKTWNKAKPETHMVLPKG 106


>UniRef50_Q0EWA9 Transposase and inactivated derivative n=1 Tax=Mariprofundus
           ferrooxydans PV-1 RepID=Q0EWA9_9PROT
          Length = 742

 Score = 77.1 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA--- 55
           M   ELA L G   + + I K   +EGW +  +   Q GK      +        +    
Sbjct: 5   MPASELAGLPGLPGTDRGIRKLADREGWQSRKR---QKGKGLEYSPSSLPEVTRTHLAHL 61

Query: 56  ------ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
                 +    Q E    +   P+E +     +EM   E  +   L+ R
Sbjct: 62  SVKAAMDEVSKQPEYAQYAEAEPVESIPGVKTREMLDEEAAEHRRLIAR 110


>UniRef50_D2YK71 Transposase, putative n=1 Tax=Vibrio mimicus VM573
           RepID=D2YK71_VIBMI
          Length = 748

 Score = 76.7 bits (187), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  ELA L G   + + +     KE W   P+     GK    H+     E I +  R  
Sbjct: 7   TSTELAGLPGLPSTDRNVRIKAEKENWEKRPREI---GKGFEYHIRSFPMETIAHLSRD- 62

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL-LREGIIGLLQRLGIRDS 113
                  L   +  E+    L  E+   EQ +   +L   +G + LL  L   D 
Sbjct: 63  ------FLQQKSEGELAAEKLVAELAAKEQAKKRHVLNASQGAMRLLNTLKAEDR 111


>UniRef50_A4JDI5 MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root
           RepID=A4JDI5_BURVG
          Length = 726

 Score = 74.8 bits (182), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 8/111 (7%)

Query: 2   TPDELA--RLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  ELA   L G   + Q +     +E W    +     GK     ++    E       
Sbjct: 10  TAPELAMLGLPGVPTTEQGVRYSATREKWAARRRA---KGKGLEYALDSLPAEAQAAIRH 66

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
                   ++       V+      ++   +  Q      R+GI+ +L R+
Sbjct: 67  RASAALVTSVPAQPAKAVIRREQQLQLVETDA-QRLRADARKGILSILDRI 116


>UniRef50_A1RM55 Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1
          RepID=A1RM55_SHESW
          Length = 727

 Score = 72.9 bits (177), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 1  MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          +T  EL        +   + +  ++EGW    + G  GG     H+N       ++    
Sbjct: 6  LTAKELEDFPELPKTESGVIRRAKREGWICRKREGRGGG--FEYHLNSLPLAAQQHILSE 63

Query: 59 EGQGEAPALSGDAPLE 74
          + + +    +  A   
Sbjct: 64 KTKAQIAKKTEQAKTL 79


>UniRef50_B8DK74 Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris
           RepID=B8DK74_DESVM
          Length = 732

 Score = 72.9 bits (177), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 2   TPDELARLTGYS-RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE---- 56
           T  +L  L G S   T+ +   +EGWT+ P+ G  GG      +    +   +       
Sbjct: 9   TTRDLLPLLGISSESTVIRRASREGWTSRPRKGRGGGN--EWLLASMPKSTRKALLDGML 66

Query: 57  ------RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGI 110
                   +     P L    P   +       +     +Q    + R  +I  ++RL +
Sbjct: 67  RTAAQEAEKNLPALPPLDAADPRRAIAAR-MSPLKHCSNRQREIAMARLALIREVERLAV 125


>UniRef50_Q2LQD6 Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS
          Length = 754

 Score = 72.1 bits (175), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  ELA + G S Q I K   +EGW    + G  GGK +L        ++     R    
Sbjct: 14  SAKELAVIMGISWQAIQKRADQEGWPCEMETGR-GGKRKLFRRAVLPVDWQARIARQRAA 72

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
             A A++ ++P           +  +E+++    L++E  +    RL
Sbjct: 73  QAAAAIAPESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARL 119


>UniRef50_B0UVF4 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336
           RepID=B0UVF4_HAES2
          Length = 145

 Score = 72.1 bits (175), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 8/115 (6%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           T  EL  + G   + Q I  + +K+ W      GV+G      +V +       +    +
Sbjct: 6   TLKELLDVGGLPSTPQGIILYAKKDKWRRRRVSGVKG-NVFEYYVYDMPESVQTSLGVTK 64

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK 114
                     D   +     L + ++        ++LL  G++ + +RL I   +
Sbjct: 65  ETLALKQELIDDIQKENEKFLNQILSD-----IKNVLLNSGVLRIRERLSITKEE 114


>UniRef50_B4TBP2 Putative cytoplasmic protein n=33 Tax=Salmonella enterica
           RepID=B4TBP2_SALHS
          Length = 124

 Score = 71.3 bits (173), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 6/112 (5%)

Query: 2   TPDELARLTGYS--RQTINKWVRK--EGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE- 56
           T  E   L G+      + + + K  EG     +  V+  KA   H++       R  + 
Sbjct: 7   TVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVK-SKAEEFHISVFPLYVHRYLDD 65

Query: 57  RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
             E     P    +A  E +   + + +TP ++KQ T      G+  +   L
Sbjct: 66  SGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFL 117


>UniRef50_Q8EJ30 Transposase, putative n=1 Tax=Shewanella oneidensis
           RepID=Q8EJ30_SHEON
          Length = 715

 Score = 71.0 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 13/116 (11%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE--- 56
           +P EL +L G   + Q I    + E W +  K    G K    H+         +     
Sbjct: 7   SPQELLQLPGMPTTVQGIRFKAKTESWESRKKE---GSKGFEYHLGSLPPITQAHLRQQA 63

Query: 57  -----RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQR 107
                  E       ++  A   V    L ++   + + +    + R+ ++  +  
Sbjct: 64  VKNTTSREVAAARQLIATPASQLVKKTELQQQFLTLPKAKQQVAMERQLLLNDMAN 119


>UniRef50_P07636 Transposase n=8 Tax=root RepID=TRA_BPMU
          Length = 663

 Score = 70.2 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1  MTPDELARLTGYSRQ--TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
          ++P E A L G  +    +    +K+GW    + GV+GGKA   + N    E        
Sbjct: 5  VSPKECANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKAIEYNANSLPVEAKAALLLR 64

Query: 59 EGQGE 63
          +G+ E
Sbjct: 65 QGEIE 69


>UniRef50_A9MJ52 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- RepID=A9MJ52_SALAR
          Length = 124

 Score = 70.2 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 6/112 (5%)

Query: 2   TPDELARLTGYS--RQTINKWVRK--EGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  E   L G+      + + + K  EG     +      KA   H++       R  + 
Sbjct: 7   TVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRK-RLKSKAEEFHISVFPLYVHRYLDE 65

Query: 58  PEGQGEAPALS-GDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
              +  +  +S  +A  + +   + + +TP ++KQ T L   +G+  +   L
Sbjct: 66  GGEEPVSDHISVQEAEPKDIWEMMFRLLTPEQRKQVTGLFRVKGMKAVFPFL 117


>UniRef50_B6WSU4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WSU4_9DELT
          Length = 697

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 14/117 (11%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           +  ELA   G + ++++   ++EGW   P+ G  GGK  L  V+    E          +
Sbjct: 9   STQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGK--LWVVSSMPAEIRDRLASALLR 66

Query: 62  GEAPALSGDAPLEVLLVTLAK---------EMTPVEQKQFTSLLLREGIIGLLQRLG 109
             A  +   A    +   +            ++  E+   T    R      L R+ 
Sbjct: 67  QPAAIIEESAACASIGSNICAPIGTAGNGPALSDRERAIVT---ARLAFCRELDRIA 120


>UniRef50_C5S4R0 Putative uncharacterized protein n=1 Tax=Actinobacillus minor
          NM305 RepID=C5S4R0_9PAST
          Length = 179

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  ELA + G   + Q INK  R + W    K GVQGG A   H         +      
Sbjct: 9  SASELAGIQGLPKTPQGINKRARTQNWQKRNKDGVQGG-AVEYHYTSFPENVQQALGFIV 67

Query: 60 GQGEAPALSGDA 71
           Q E    + D 
Sbjct: 68 SQTEHSNQTRDD 79


>UniRef50_A7JV32 Possible bacteriophage transcriptional regulator n=1
          Tax=Mannheimia haemolytica PHL213 RepID=A7JV32_PASHA
          Length = 225

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 8/89 (8%)

Query: 2  TPDELARLTGYSRQ--TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP- 58
          T  E+A +     Q   + +   K  W      G +G  A   H +       +      
Sbjct: 11 TASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEGKRGV-AFEYHYSSLPISVQQELGFAQ 69

Query: 59 ----EGQGEAPALSGDAPLEVLLVTLAKE 83
              E      A      +E +     + 
Sbjct: 70 TAVKEEPRTLVAAQTADEMERVPFYNVQA 98


>UniRef50_B8FD28 Transposase-like Mu n=1 Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FD28_DESAA
          Length = 682

 Score = 67.9 bits (164), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 3/101 (2%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQ-GGKARLVHVNEQVREYIRNAERPE 59
           +T  +LA++ G  R T+ +  +KEGW        Q GG  +L H N       R     E
Sbjct: 7   VTCSQLAQVIGQHRSTVLRRAQKEGWAFHEIANRQGGGHQKLYHFNSLPMSIQRAIIEKE 66

Query: 60  GQGEA--PALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
              +   PA   ++ L       A     +++      +L 
Sbjct: 67  LNAQDNGPAPPPESVLTQSSELAAAPGWNMDRAYARRAILE 107


>UniRef50_Q9CNL1 Putative uncharacterized protein n=1 Tax=Pasteurella multocida
          RepID=Q9CNL1_PASMU
          Length = 216

 Score = 67.9 bits (164), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 8/88 (9%)

Query: 9  LTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALS 68
          L G S + I K   +EGW    + GV+G K    H         +     + +     ++
Sbjct: 7  LPG-SDKGIVKKAAREGWQKRQRQGVKG-KTFEYHYTSFPIAVQQQLGLYQAEQPHSQVN 64

Query: 69 GDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
                        E++ +E  Q    +
Sbjct: 65 EPRRHYTT------EVSSIENTQTEDHI 86


>UniRef50_B7UXK6 Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8
          Length = 689

 Score = 67.5 bits (163), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 2  TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  ELA L G   + + +     ++ W+   +    G KA   HV+   +E         
Sbjct: 6  SAQELAGLPGVPGTARNVKAMAERKSWSGRRRV---GTKAIEYHVSALPKETRAALLNAA 62

Query: 60 GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
              A           L+ T  +++    ++     L
Sbjct: 63 LGEVATKAVRQETQLALVETNRQQLVADARQGVLHAL 99


>UniRef50_B8GS44 Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7
           RepID=B8GS44_THISH
          Length = 671

 Score = 67.1 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 29/101 (28%), Gaps = 4/101 (3%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
           +   LA L G   ++Q +    +++GW    + G  GG+      +           +  
Sbjct: 10  SAKALAGLPGMPGTQQNVTAKAKRDGWACRKRSGKGGGR--EYAFSSLPIATQAALLKAA 67

Query: 60  GQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREG 100
                 A +              E          + L +EG
Sbjct: 68  EPAARAARAAQGEPAGAPGEYDAEALWAWAATRPASLQKEG 108


>UniRef50_C4LBA7 Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187
          RepID=C4LBA7_TOLAT
          Length = 741

 Score = 66.3 bits (160), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 24/95 (25%), Gaps = 9/95 (9%)

Query: 4  DELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           ELA L G  +    + K   +E W    +     GK    H++    E        +  
Sbjct: 8  SELAGLVGLPQYQDGVRKKADREDWKNRKRES---GKGLEYHISSLPSETRAYL--AKTM 62

Query: 62 GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
              A +               +         + +
Sbjct: 63 ASETASAIQD--HAKAGVAMAALADKSAVSVQAKI 95


>UniRef50_A9L0K4 Integrase catalytic region n=2 Tax=Shewanella baltica
          RepID=A9L0K4_SHEB9
          Length = 738

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
          +  E+A L     + +    ++E W    + G+ GG     H+N    E  +   + E +
Sbjct: 7  STVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG--FEYHLNSLPLEARQKLAKQEAE 64

Query: 62 GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
              A S  + +         +M  V Q +    +
Sbjct: 65 Q--IATSPTSLMRAGSAVAKLQMPAVSQTEKAKSI 97


>UniRef50_Q30W02 Bacteriophage transposase A protein, putative n=4 Tax=Desulfovibrio
           RepID=Q30W02_DESDG
          Length = 708

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 9/104 (8%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQ 61
           T  ELA     +  TI +   +EGW + P+ G  GG      ++               Q
Sbjct: 9   TAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGGN--EWIISSMPEATRTKLLAACAQ 66

Query: 62  GEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLL 105
            +  AL   AP   L      E       + +  L R  ++ L 
Sbjct: 67  DQLDALDR-APKLTLATAAVSE------SKKSKALARADLVALY 103


>UniRef50_A7JV30 Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213
          RepID=A7JV30_PASHA
          Length = 656

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 3  PDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
            E+A L+G      ++++   KEGW      GV+G      H+     E  +       
Sbjct: 7  AKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGV-TYEYHLTSLPIETQQQLRLNAA 65

Query: 61 QGEAPALSGDAPLEVLLVTLAK 82
              P  +   P       +A+
Sbjct: 66 LAVIPQAAELQPKRDDPALIAR 87


>UniRef50_Q32IA5 Putative uncharacterized protein n=1 Tax=Shigella dysenteriae Sd197
           RepID=Q32IA5_SHIDS
          Length = 135

 Score = 65.6 bits (158), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 4/111 (3%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           ++ +EL  L G   + Q +   ++K   +   +    G K     ++       +     
Sbjct: 3   VSVNELVGLPGMPGTAQGVRYSIKKRASSEHFRRKRAGSKTIEYSIDCLPPITQQALRER 62

Query: 59  EGQGEAPALSGD--APLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQR 107
                      +      V        + PVE  + +  L+ E +  L + 
Sbjct: 63  HVAQLMATDPQEITTQPPVKRERKQNVVQPVEAYRGSPQLVEERLNALTEN 113


>UniRef50_A7JUV9 Possible transposase n=1 Tax=Mannheimia haemolytica PHL213
           RepID=A7JUV9_PASHA
          Length = 176

 Score = 65.2 bits (157), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 2   TPDELARL----TGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA L       ++Q +    +K+GWTT  K GV GG+     ++   +E      R
Sbjct: 11  SAKELAELSLACLPKTKQGVLYQAKKQGWTTHKKVGV-GGEILEFALSNLPQEIQTEI-R 68

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLL 97
                            V        +T  +++   + + 
Sbjct: 69  SRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREIADARMA 108


>UniRef50_O05069 Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae
           RepID=TRA_HAEIN
          Length = 687

 Score = 65.2 bits (157), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 32/114 (28%), Gaps = 8/114 (7%)

Query: 2   TPDELARLTGYS----RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA L   +     + I +  ++E W +  + G  GG      +     E       
Sbjct: 11  SVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGRGGG--LEYELASLPIEVQNELLL 68

Query: 58  P--EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                Q        +    +    + +       K      ++ G +  +  L 
Sbjct: 69  KTTPEQTAVALQKIEETRPLASNEVWQLWDEASAKAQEQAKIKLGTMFAVANLV 122


>UniRef50_D2TQ32 Phage transposase n=14 Tax=Gammaproteobacteria RepID=D2TQ32_CITRO
          Length = 695

 Score = 64.4 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 21/125 (16%)

Query: 2   TPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP- 58
           +  EL  L G   + Q +   +RK   + + +   +G K     ++       +      
Sbjct: 4   SVKELVGLPGMPGTEQGVRYSIRKYATSETSRRRQEGTKGFEYSIDCLPEVTQQALRERY 63

Query: 59  ----------EGQGEAPALSGDAPLEVLLVTLAK--------EMTPVEQKQFTSLLLREG 100
                     E        +  +P  V  V   +         +  + +KQ      R  
Sbjct: 64  ALQLMTQKADESPAPVVTKARRSPDVVDAVEAYRGSPQLMVERLNALTEKQRQVADARIA 123

Query: 101 IIGLL 105
           I+  +
Sbjct: 124 IVSEV 128


>UniRef50_B0US86 Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2
          Length = 662

 Score = 64.0 bits (154), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 2   TPDELARL----TGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  EL  L       +++ +    ++E W +  + G  GG      ++   +E      R
Sbjct: 9   SAQELIGLQLVILPTTKKAVIDKAKRENWQSRKRVGRGGG--VEYALSSLPQEVQEEI-R 65

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
            +      A        VL   + +++T  +++   + +
Sbjct: 66  DKFATSVVAGKPKKLP-VLKSVVLEDLTEKQRQAADARM 103


>UniRef50_UPI0001699232 hypothetical protein Epers_01870 n=1 Tax=Endoriftia persephone
           'Hot96_1+Hot96_2' RepID=UPI0001699232
          Length = 150

 Score = 63.3 bits (152), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 1   MTPDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP 58
           +T  ELA L G   + +++N+   +       K     GK     +     E  R   R 
Sbjct: 5   LTAAELAGLPGMPGTPRSVNRAGDRGEIERRKKA---KGKGWEYSLTSLPAETQRYLTRT 61

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQ-RLG 109
                A A     P   + + L  ++T  +++Q  + L    +I  L  RLG
Sbjct: 62  AAAEIAKAAPPQ-PPAPIELPLMPDLTDWQREQMHARLAVLSVIDELAQRLG 112


>UniRef50_C4U3A5 Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii
           ATCC 33638 RepID=C4U3A5_YERKR
          Length = 73

 Score = 62.9 bits (151), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 37  GKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLL 96
           GK     ++                 E  ++        + +   K++TP E+ +F+  +
Sbjct: 5   GKGIEYFIDSLPDNVSTYIYHHSELFERISIQ---EHFDIWINAFKQLTPSERYKFSEYI 61

Query: 97  LREGIIGLLQRL 108
           LREGII + + L
Sbjct: 62  LREGIISIYKNL 73


>UniRef50_A9D2T9 Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43
           RepID=A9D2T9_9RHIZ
          Length = 647

 Score = 62.5 bits (150), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 10/112 (8%)

Query: 2   TPDELARLTGYSRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREYIRNAE 56
           TP E+A   G S + IN+  RK  W         + G  GG     HV+   +       
Sbjct: 6   TPKEIADAAGVSERAINQMARKSHWRHQDQKARKRAGRGGG--WEYHVSLFPQAAQARLM 63

Query: 57  RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRL 108
              G            L      L      + + +  +   R  I+  +  L
Sbjct: 64  VIHGAPANA---NRNKLADARSKLWARYECLSKDRKAACEARLKIVADVALL 112


>UniRef50_Q125Z1 Integrase, catalytic region n=1 Tax=Polaromonas sp. JS666
          RepID=Q125Z1_POLSJ
          Length = 772

 Score = 60.2 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 1  MTPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA 55
          +T +EL  L      ++ +++     GW      G  GG  R  HV           
Sbjct: 9  LTANELLGLPNMPADKRGVHRKALASGWQYREVAG-NGGTRREYHVASLPATTRAAL 64


>UniRef50_B8FGN6 Mu transposase n=1 Tax=Desulfatibacillum alkenivorans AK-01
          RepID=B8FGN6_DESAA
          Length = 653

 Score = 59.4 bits (142), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 2  TPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          T  E+A+  G + +++ +   KEGW         G K    H +        +  +
Sbjct: 7  TAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAH-SGLPIPVQASLLK 61


>UniRef50_A9LZ01 Bacteriophage transposase n=11 Tax=Neisseriaceae RepID=A9LZ01_NEIM0
          Length = 662

 Score = 59.4 bits (142), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 12/116 (10%)

Query: 1   MTPDELARL----TGYSRQTINKWVRKEGWTTSPKPGV-QGGKARLVHVNEQVREYIRNA 55
           +T  EL +L       + + + +  + + W    + G  +GG+ +   +     E     
Sbjct: 3   ITIGELLKLNIQGLPTTARGLRERAKTQNWPYIEEVGKARGGRLKKYLIASLPAEIRAAI 62

Query: 56  ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQ------KQFTSLLLREGIIGLL 105
            + +   E          +V   T        E       KQ +    R  ++  +
Sbjct: 63  MKRQSD-ELTEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVADARCAVVAAV 117


>UniRef50_A6D441 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1
          RepID=A6D441_9VIBR
          Length = 230

 Score = 59.4 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 8/85 (9%)

Query: 3  PDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
            EL  L G       I +  +++GW +    G    +A   H++    E      R + 
Sbjct: 7  ASELMDLPGMPSSNSGIAQKAKRDGWKSRKTRGQ--SRALEYHISSF-DERDLAELREKY 63

Query: 61 QGEAPALSGDAPLEVLLVTLAKEMT 85
            E      D   E+  V   K+ +
Sbjct: 64 GTEVI---PDNVTEISNVKAIKDFS 85


>UniRef50_C0DX48 Putative uncharacterized protein n=3 Tax=Neisseriaceae
           RepID=C0DX48_EIKCO
          Length = 548

 Score = 58.6 bits (140), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 20/126 (15%)

Query: 1   MTPDELARL----TGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAE 56
           ++  ELA+L       + + I+   ++E W    +    GG      V     E      
Sbjct: 8   LSAAELAQLSIPSLPKTPKGISDKAKREYWPNRRRAQRGGG--VEYQVAGLPEEIQAAVR 65

Query: 57  RPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQ--------------KQFTSLLLREGII 102
             + +             V        +  +EQ              KQ      R  + 
Sbjct: 66  ERQAEQLLAQSQPAVLPSVAKAKRPVAVRRMEQLGLPIDDYAMGLNDKQRDCAHARMALA 125

Query: 103 GLLQRL 108
             + RL
Sbjct: 126 AEVLRL 131


>UniRef50_Q0T6N1 Putative repressor protein n=3 Tax=Shigella flexneri
           RepID=Q0T6N1_SHIF8
          Length = 169

 Score = 57.9 bits (138), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 17/109 (15%)

Query: 1   MTPD---ELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           MTP    EL  + G + Q ++K  +KEGW    + G +G                     
Sbjct: 11  MTPKQITELDGMPG-TIQGVHKRAKKEGWPKRSQEGRRG-PGVEY------------IPA 56

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQ 106
                +      +A    +   L  ++   E ++    + + G+ GL+Q
Sbjct: 57  IPAMQKIAIEEMNADTLKMFSLLINKLGENEVREIELNMAKYGLSGLMQ 105


>UniRef50_Q58ZE0 CI repressor-like protein n=5 Tax=Haemophilus influenzae
           RepID=Q58ZE0_HAEIN
          Length = 166

 Score = 57.9 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 3   PDELARLTGYSR--QTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERP-- 58
           P +LA L   S     + +  ++EGW      G++GG     H +       +       
Sbjct: 10  PRDLAGLGDLSPFPSNVTRKAKQEGWIKREAKGIKGG-GFEYHYSSLPPAVQQALGFKPN 68

Query: 59  EGQGEAPALSGDAPLEVLLVTLAKEMTPVEQK 90
           E + E    +        +  +   ++ +E K
Sbjct: 69  EAKKEPLPAARVGERLKEIDRIMAAISSLEAK 100


>UniRef50_C1D935 Phage transposase n=2 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D935_LARHH
          Length = 241

 Score = 57.9 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 13/118 (11%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
           +   ++A L   + + I     ++GW    K     GK     +    +E      R + 
Sbjct: 14  LAAMKIAGLPA-TERGIRLCAERDGWQWQRK---NKGKGFEYAITSLPQEAQAEIRRRQA 69

Query: 61  Q------GEAPALSGDAPLEVLLVTLAKEMTPVEQ---KQFTSLLLREGIIGLLQRLG 109
           Q        +  L G          L   +T VE+   KQ      R  ++G +++L 
Sbjct: 70  QELLESSAASITLPGKGRSARREEQLNLTLTTVERLTSKQRAVAEARCALVGEVRKLS 127


>UniRef50_P06019 Repressor protein CI n=3 Tax=root RepID=RPC1_BPMU
          Length = 174

 Score = 57.1 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 11/109 (10%)

Query: 8   RLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQV----REYIRNAERPEGQGE 63
            + G S   ++     +GWT   K GV+GGKA    V         + I +         
Sbjct: 5   GMPG-SVAGVHYRANVQGWTKQKKEGVKGGKAVEYDVMSMPTKEREQVIAHLGLSTPDTG 63

Query: 64  APALSGDA------PLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQ 106
           A A            L   L+ + +E+ P E ++   LL + G++ L+ 
Sbjct: 64  AQANEKQDSSELINKLTTTLINMIEELEPDEARKALKLLSKGGLLALMP 112


>UniRef50_C5S4Q8 Putative phage transposase n=1 Tax=Actinobacillus minor NM305
          RepID=C5S4Q8_9PAST
          Length = 663

 Score = 57.1 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 2  TPDELARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPE 59
          +  +LA + G     Q +NK  R+E W    + G Q GKA   H++    E  +      
Sbjct: 6  SASDLAGVKGMPSSPQGVNKKARQELWQKQQQIGKQ-GKAFEYHISSLPPETQQALRLQA 64

Query: 60 GQGEAPALSG 69
               P    
Sbjct: 65 ALAVVPIAEM 74


>UniRef50_A3GNK0 Transposase n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GNK0_VIBCH
          Length = 684

 Score = 56.7 bits (135), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 23/95 (24%), Gaps = 7/95 (7%)

Query: 2  TPDELARLTGYSRQTINKWVRKE----GWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          T  E+          +      +          +   QG KA    ++    E      R
Sbjct: 4  TAKEIMGAPLMPSSDVRTRGNLDRLTANKPEQKRK-RQGSKAFEYQIDCLPEETRLYLLR 62

Query: 58 --PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQK 90
             + Q E    S +    V   +    +   E  
Sbjct: 63 DIAKQQTEQAESSRNTRQVVTPASDELWLEYEEAT 97


>UniRef50_A4EV07 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6
           RepID=A4EV07_9RHOB
          Length = 210

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 16/107 (14%)

Query: 1   MTPDELARLTGYSRQTINKWVRKEGWTTSP-----KPGVQGGKARLVHVNEQVREYIRNA 55
           +   +L  L G + + +N    ++GW   P     +PG  GG     H +    +     
Sbjct: 17  LASAKLPGLPG-TVRGVNLVAERKGWAKQPNAIKHRPGRSGG--LFYHWSILPLKTRLRL 73

Query: 56  ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII 102
            +         L    P  +           + QK  T  + R+  +
Sbjct: 74  LKD--------LEKQEPQRLERGEAWAIYEGLSQKAKTEAITRQDAL 112


>UniRef50_B7UGE5 Predicted DNA transposition protein n=2 Tax=Enterobacteriaceae
           RepID=B7UGE5_ECO27
          Length = 680

 Score = 54.8 bits (130), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 20/127 (15%)

Query: 2   TPDELARLTGY--SRQTINKWVRK-EGWTTSPKPGVQGGKARLVHVNEQVREYI------ 52
           + +ELA L G   + Q +   + +        K   +G KA   H++    E        
Sbjct: 4   SANELAGLPGLPGTVQGVRWTLNRITETHPEWKRKREGTKAFEYHIDCLPAEAQKVLRKR 63

Query: 53  --------RNAERPEGQGEAPALSGDAPLEVL---LVTLAKEMTPVEQKQFTSLLLREGI 101
                           Q     ++    LEV+        +E+  +  KQ      R  +
Sbjct: 64  LTHQVLEDAQLPAVVEQKAVKNVAVRDELEVMVKCPELALREVQSLTDKQKAIADARILL 123

Query: 102 IGLLQRL 108
              + +L
Sbjct: 124 ATEVHKL 130


>UniRef50_A5F224 Transposase n=13 Tax=Gammaproteobacteria RepID=A5F224_VIBC3
          Length = 667

 Score = 54.8 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 3/86 (3%)

Query: 1  MTPDELARLTGYS---RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          +T  E A + G+        N+ V+        +   +G KA   H++    +      +
Sbjct: 3  VTAKECAGVGGFPTDKNNARNRLVKLASGQPDMQRKREGTKAFEFHISILPPQTQAALLK 62

Query: 58 PEGQGEAPALSGDAPLEVLLVTLAKE 83
            G+ +      + P      T  +E
Sbjct: 63 KTGKVKVGEQVINLPKAKAEKTYCRE 88


>UniRef50_A9ICZ8 Transposase A n=1 Tax=Bordetella petrii DSM 12804
           RepID=A9ICZ8_BORPD
          Length = 653

 Score = 54.0 bits (128), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 29/103 (28%), Gaps = 8/103 (7%)

Query: 3   PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEG 60
             ELA L     + Q IN   +   W + P+ G      R         E      +   
Sbjct: 8   AQELAGLPAMPATVQGINHRAKTSAWQSRPRAGRG--GGREYAFASLPVETQAALLKRTT 65

Query: 61  QGEAPALSGDAPLEVLLVTLA----KEMTPVEQKQFTSLLLRE 99
                  +  AP    L        + +     ++ ++L   E
Sbjct: 66  PAAPARPAPAAPDRAGLWEAYERRPQTLKDEAARRLSALQAVE 108


>UniRef50_A3VYG1 Transposase, putative n=5 Tax=Rhodobacteraceae RepID=A3VYG1_9RHOB
          Length = 707

 Score = 53.6 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 26/104 (25%), Gaps = 9/104 (8%)

Query: 2   TPDELA--RLTGY--SRQTINKWVRKEGWTTSP---KPGVQGGKARLVHVNEQVREYIRN 54
           +  +LA   L     +++ IN    +EGW       +     G     H +         
Sbjct: 12  SAADLAEAGLPDLPGTKRKINLLAEREGWARHAGKVRRRKGAGGGVEYHWSLLPIRARMR 71

Query: 55  AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLR 98
                    A     D   E      A +    E +     +  
Sbjct: 72  LSADLVNSPAARPGKDEAWER--YAAAGDKARTEAEARLEAIAE 113


>UniRef50_Q2WA75 Transposase and inactivated derivative n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2WA75_MAGSA
          Length = 733

 Score = 53.2 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 25/102 (24%), Gaps = 11/102 (10%)

Query: 8   RLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPAL 67
            +   S + ++   +   W   P+    GG     H+     E            EA   
Sbjct: 22  DMMPLSGRRLSDHAKASNWPCRPRTKSGGG--VEYHITALPVEARL-LISRHELAEAVQA 78

Query: 68  SGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                +  +L               + L  R   +    RL 
Sbjct: 79  GRAEGMRAVLQETM--------DARSKLAARTAGLAEFMRLS 112


>UniRef50_A8I7J2 Transposase protein A n=2 Tax=Rhizobiales RepID=A8I7J2_AZOC5
          Length = 725

 Score = 52.9 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 30/101 (29%), Gaps = 7/101 (6%)

Query: 2   TPDELARLT----GYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  E+A L       S + + K   ++ W +  +    GG+     ++            
Sbjct: 6   TAAEIAGLGLPDIPESERGVRKMAGRDAWPSREREASGGGR--EYPLSALPTAARAAYVA 63

Query: 58  PEGQG-EAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLL 97
              Q  + P     A        LA      ++    ++L 
Sbjct: 64  RHLQALDVPVEVVRAAASEPEAELAAPAALDQRDGRLAILA 104


>UniRef50_Q2W6I7 Putative uncharacterized protein n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W6I7_MAGSA
          Length = 193

 Score = 51.7 bits (122), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 2   TPDEL--ARLTGYS--RQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  EL   RL G    +  + +  R++GWTT   P  QGG+    H     R   +    
Sbjct: 48  TAAELVALRLPGLPTSKAAVTRIAREQGWTTEKVPC-QGGERHAYHFTSLPRRAFQGLID 106

Query: 58  PEGQGEAPALSGDA 71
                   A++   
Sbjct: 107 MVLAPPPGAVAPVD 120


>UniRef50_B6IMZ2 Mu transposase, putative n=1 Tax=Rhodospirillum centenum SW
           RepID=B6IMZ2_RHOCS
          Length = 191

 Score = 51.3 bits (121), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 6/90 (6%)

Query: 2   TPDELAR--LTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           +  ELA   L G   ++  I +  R E W      G  G +    HV             
Sbjct: 45  SAAELAGVRLPGLPATKAGITRLARAEAWRVREVHGRGGIR-FEYHVTSLPPRAFDQLIA 103

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPV 87
              +   P    +     L       +   
Sbjct: 104 LIVE-AIPEPEPERIELRLPAAPRPVLADD 132


>UniRef50_UPI0001905178 hypothetical protein RetlG_31223 n=1 Tax=Rhizobium etli GR56
          RepID=UPI0001905178
          Length = 105

 Score = 50.9 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 20/71 (28%), Gaps = 9/71 (12%)

Query: 1  MTPDELARL----TGYSRQTINKWVRKEGWTT-----SPKPGVQGGKARLVHVNEQVREY 51
          +T  EL  L       S     K  + EGW +         G +GG     HV+   +  
Sbjct: 5  LTFGELLALSLPELPISLSGFAKRAKAEGWKSNPALFRKAEGREGGGGFAYHVSLLPKVA 64

Query: 52 IRNAERPEGQG 62
                     
Sbjct: 65 QARLAMISAGT 75


>UniRef50_B6ISS2 Phage transposase protein A, putative n=1 Tax=Rhodospirillum
           centenum SW RepID=B6ISS2_RHOCS
          Length = 710

 Score = 49.8 bits (117), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 29/115 (25%), Gaps = 6/115 (5%)

Query: 2   TPDELARLT----GYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
           T  ELA L       + + I     + GW +  +    GG+     ++    E      R
Sbjct: 6   TAAELADLQLPAIASTERGIRGQATRGGWESRQRAARGGGR--EYPLSALPEEARLELAR 63

Query: 58  PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
                         P    +    + +      +     +      +      RD
Sbjct: 64  RAAAEAGDYEKPTPPKRKSVGPAPQNVNVATMPEKHLAEMEAKAAVVRAFHAYRD 118


>UniRef50_Q38452 Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112
          RepID=Q38452_BPD31
          Length = 48

 Score = 49.4 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 3  PDELARLTGY--SRQTINKWVRKEGWTTSPKPGVQGGKARLVHV 44
          P +LA L G   + + + K   +EGW      G  GG     HV
Sbjct: 7  PTKLAGLPGLPTTDRGVRKLAEREGWKKQKHSGRGGG--YEYHV 48


>UniRef50_C6P2B9 Transposase-like Mu n=1 Tax=Sideroxydans lithotrophicus ES-1
           RepID=C6P2B9_9PROT
          Length = 704

 Score = 45.9 bits (107), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 18/120 (15%)

Query: 4   DELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQG- 62
             +A   G ++ +      +E W    +    G K     ++           R   +  
Sbjct: 8   KTIAVALGVAKSSACDRANREVWPFVEQAARGGQKRL-YPLSTLPMPVREAILRHTLKQN 66

Query: 63  -------------EAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
                         A A +  AP   + + ++ E+   ++K       R  II  ++RL 
Sbjct: 67  QPAGVSTISPAVSSAVAPNTTAPFYPVALPVSHELKDWQRKTAE---ARSAIIAEIKRLS 123


>UniRef50_B1JIP4 Transposase-like Mu n=4 Tax=Gammaproteobacteria
          RepID=B1JIP4_YERPY
          Length = 684

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 8/102 (7%)

Query: 1  MTPDELARLTGYSRQTINKWV---RKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          ++ +EL  L G             ++ G +   K    G KA   H++    +       
Sbjct: 3  LSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVVRE 62

Query: 58 PEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLRE 99
                      +A  + +      ++ P  + +    L+R+
Sbjct: 63 RHLNSLL-----NAEKKAVKTAFNGDLNPRVKAKHELDLMRQ 99


>UniRef50_Q82XF6 Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea
           RepID=Q82XF6_NITEU
          Length = 265

 Score = 42.8 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 18/98 (18%)

Query: 2   TPDELARL-------TGYSRQTINKWVRKEGWTTSPKPGVQG--GKARLVHVNEQVR--- 49
           + DELA+L          S +   +  ++E W +    G  G  GK              
Sbjct: 10  SADELAKLSPHLVTRIPVSPRQCRERAKREKWLSREVAGKGGPRGKKTEF----LPPENI 65

Query: 50  --EYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMT 85
             E  +   R          S +   +  +    + M+
Sbjct: 66  LSEIHQFLSRNPDFFAEAGSSPENATQPGMYQARQPMS 103


>UniRef50_B3QCJ2 Integrase catalytic region n=1 Tax=Rhodopseudomonas palustris TIE-1
           RepID=B3QCJ2_RHOPT
          Length = 724

 Score = 41.7 bits (96), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 2   TPDELA--RLTGY--SRQTINKWVRKEGWTTSP---KPGVQGGKARLVHVNEQVREYIRN 54
           T  ELA  +L G   +   + ++  +EGW  S    +     G     +++         
Sbjct: 6   TARELAEAQLPGLPSTESALIRFAGREGWNDSLAYVRRRSGRGGGLEYNISLLPPSARVE 65

Query: 55  AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLG 109
            ER      AP     +           E    E+    +++      G  QRLG
Sbjct: 66  FERRHRAILAPQPVEAS-TAAQPAENLSERAAKERDARLAIVAAFAAFGRGQRLG 119


>UniRef50_C4GJU9 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147
           RepID=C4GJU9_9NEIS
          Length = 756

 Score = 41.3 bits (95), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 12/114 (10%)

Query: 7   ARLTGYSRQTINKWVRKEGWTTSPKP--GVQGGKARLVHVNEQVREYIRNAERPEGQGEA 64
             +   + Q +    +KE W     P  G +GG  R           +    +       
Sbjct: 16  LEILPNTVQGLYYKAKKENWLFRETPCQGGKGGVKREY---ALPPAVLDAIWQRRAAAAV 72

Query: 65  PALSGDAPLEVLLVTLAK-------EMTPVEQKQFTSLLLREGIIGLLQRLGIR 111
              +   P   +     +        +      Q      R G++ L++R+   
Sbjct: 73  AEGAYGQPEPCVAGAAYQGEVLDAGRLNGSTAAQRGREGARIGVLRLVERIMAE 126


>UniRef50_A3YA61 Prophage MuSo2, transcriptional regulator, Cro/CI family protein
          n=7 Tax=Gammaproteobacteria RepID=A3YA61_9GAMM
          Length = 253

 Score = 40.9 bits (94), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 3/67 (4%)

Query: 1  MTPDELARLTGYSRQ---TINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAER 57
          +   E++   G+      T N                +G KA   HV+   +E   +   
Sbjct: 33 VVASEVSGRDGFPTSDRWTRNHLKELASNKPHLVRKRRGTKAFEYHVSLLPKETQESLLD 92

Query: 58 PEGQGEA 64
           E   E 
Sbjct: 93 GETIPEP 99


>UniRef50_B9NM75 Integrase, catalytic region n=1 Tax=Rhodobacteraceae bacterium
           KLH11 RepID=B9NM75_9RHOB
          Length = 531

 Score = 40.9 bits (94), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 34/113 (30%), Gaps = 10/113 (8%)

Query: 2   TPDEL--ARLTGY--SRQTINKWVRKEGWTTSP---KPGVQGGKARLVHVNEQVREYIRN 54
           T  E+  ARL     +++ +  + ++  W + P   +     G     +         R 
Sbjct: 13  TATEIGEARLPDMPSTQKGVELFAKRSDWRSHPEWCRQRSGKGGGWEYNWQLFPVASRRK 72

Query: 55  AERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQR 107
                       +    P    L    + +   E  +  + L ++ +  +L  
Sbjct: 73  LLNDARLPNRDRVDAV-PDLADLQAYYESLP--EAVKAKAQLRKKVLCEVLAN 122


>UniRef50_C6XCG7 Putative phage repressor n=1 Tax=Methylovorus sp. SIP3-4
          RepID=C6XCG7_METSD
          Length = 232

 Score = 40.1 bits (92), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 15/71 (21%), Gaps = 12/71 (16%)

Query: 2  TPDELARL-------TGYSRQTINKWVRKEGWTTSPKPGVQGGKAR--LVHVNEQVREYI 52
          +  ELA L          S +      ++E W +    G  G               E  
Sbjct: 8  SASELALLSQHLVVRLPNSVRGCRDKAKREAWPSRQVNGKGGPNGILNEYMP---PPELS 64

Query: 53 RNAERPEGQGE 63
                     
Sbjct: 65 EAIRVFLEARP 75


>UniRef50_B9JYF3 Transposase protein n=3 Tax=Rhizobiales RepID=B9JYF3_AGRVS
          Length = 690

 Score = 40.1 bits (92), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 30/119 (25%), Gaps = 11/119 (9%)

Query: 2   TPDELAR--LTGYSRQ--TINKWVRKEGWTTSPKPGVQ----GGKARLVHVNEQVREYIR 53
           +  ELA+  L         +++   +  W   P    +         L H+         
Sbjct: 6   SLAELAQMQLPDLPHNMAGLHRVATEANWREHPTHARKVKGPTKPVWLYHIALLPAPART 65

Query: 54  NAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRD 112
                E    A A      +      L      +  +       R  ++  ++ L  + 
Sbjct: 66  RI---EMAASAVAPEEWDAIRTRKNQLWARFERLSNEHRDICKARLSVLCRVETLAAQK 121


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.308    0.126    0.311 

Lambda     K      H
   0.267   0.0384    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,391,401
Number of Sequences: 3077464
Number of extensions: 13776367
Number of successful extensions: 65223
Number of sequences better than 1.0e-01: 94
Number of HSP's better than  0.1 without gapping: 121
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 64813
Number of HSP's gapped (non-prelim): 256
length of query: 114
length of database: 1,040,396,356
effective HSP length: 81
effective length of query: 33
effective length of database: 791,121,772
effective search space: 26107018476
effective search space used: 26107018476
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 87 (38.2 bits)
