>ss_pred
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>ss_conf
986797268999888999999853323521067678737888731460899998521000000000244470666899997308989999999999999999999971987559
>batch____
MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK
>UniRef50_C4K715(7-112:115) Phage Mu DNA-binding domain protein n=15 Tax=Enterobacteriaceae RepID=C4K715_HAMD5  E=3e-25 s/c=1.09 id=29% cov=92%
-SAKELIHSPGLpsSTQGINQMARRQGWKHRRRLGVQ-GKALEYHIDSLPKPILKQLRLKEDAEKYSLNQQD--PFTIWIEAYRQLTDSEREKLIAFLFREGIQGLIKRL------
>UniRef50_A8GHQ2(8-116:116) MuA-transposase/repressor protein CI DNA-binding n=3 Tax=Enterobacteriaceae RepID=A8GHQ2_SERP5  E=2e-14 s/c=0.74 id=30% cov=89%
--ARELTGIAGLpsSPQGINLMARREGWISRRRKGVQ-GKAVEYHINSLPIGARSLLVLQEDPAEYQLERQDPL--AVWVEYYYHLSESEREKVLTFLMREGIDSLLA--------
>UniRef50_B8DLF1(9-103:728) Transposase-like Mu n=4 Tax=Desulfovibrio RepID=B8DLF1_DESVM   E=2e-05 s/c=0.53 id=25% cov=84%
-TAGELAAALGVTDRAVQMRARREGWQARRKPGRGGGN--EWLVVSMPEGTALAVRMAEERTAVAAAASDHPPTTSAPSAPGAPTPLDPKRRQQALAR----------------
>UniRef50_C6CJR2(13-120:136) MuA-transposase/repressor protein CI DNA-binding n=9 Tax=Enterobacteriaceae RepID=C6CJR2_DICZE  E=1e-25 s/c=1.08 id=25% cov=93%
-TTNELLGVAGLpkSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLP--EEVKTTLMRETSPDYAVVTPTNVQESTWIQIYHQLSVEERTRLIGHILREGAMGMLARL------
>UniRef50_Q2NW40(8-119:127) Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NW40_SODGM  E=4e-25 s/c=1.03 id=22% cov=87%
------------TRQGLNRRAREEGWQKRRREGAR-GKAVEYSWHSLPDMVKKTLSLRTNPAEYQLSPQ--ETSATWNEIYRQLSDAERDFIVSFIVREGVLNLLKRLDYPDE-
>UniRef50_D2BRS4(7-124:140) MuA-transposase/repressor protein CI DNA-binding protein n=6 Tax=Enterobacteriaceae RepID=D2BRS4_DICD5  E=3e-23 s/c=0.92 id=23% cov=95%
-TTNELLGVAGLpkSRQGLNKKAKDHGWERRRRKGVQGKGVEYAIWSLPEEvkatlmraTLMGTTLMRETAPDYVSAASAGAQEYTWIQIYHQLSAEERTRLIGHILREGAMSVLARL------
>UniRef50_C5S4R0(9-79:179) Putative uncharacterized protein n=1 Tax=Actinobacillus minor NM305 RepID=C5S4R0_9PAST  E=9e-10 s/c=0.91 id=43% cov=32%
-SASELAGIQGLpkTPQGINKRARTQNWQKRNKDGVQGG-----------------------------------------------------------------------------
>UniRef50_P07636(5-66:663) Transposase n=8 Tax=root RepID=TRA_BPMU   E=4e-06 s/c=0.85 id=35% cov=35%
VSPKECANLPGLpkTSAGVIYVAKKQGWQNRTRAGVKGGKA---------------------------------------------------------------------------
>UniRef50_Q30W02(9-63:708) Bacteriophage transposase A protein, putative n=4 Tax=Desulfovibrio RepID=Q30W02_DESDG  E=6e-06 s/c=0.95 id=35% cov=32%
-TAKELAIALNVTVMTITRRAEREGWQSRPRAGRGGG-----------------------------------------------------------------------------
>UniRef50_B6WSU4(9-60:697) Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSU4_9DELT  E=5e-05 s/c=0.94 id=32% cov=33%
-STQELAHYLGITVKSVHIRAKREGWQALPRAGRGGGK----------------------------------------------------------------------------
>UniRef50_A1RM55(6-80:727) Integrase, catalytic region n=1 Tax=Shewanella sp. W3-18-1 RepID=A1RM55_SHESW  E=0.0002 s/c=0.63 id=24% cov=33%
LTAKELEDFPELpkTESGVIRRAKREGWICRKREGRGGG-----------------------------------------------------------------------------
>UniRef50_B1JMJ9(8-115:115) MuA-transposase/repressor protein CI DNA-binding n=31 Tax=Enterobacteriaceae RepID=B1JMJ9_YERPY  E=2e-22 s/c=0.99 id=31% cov=94%
--AKELAGLEGLpsSPQGINLMAKREGWEQRRRRGVQ-GKAVEYHIGSLPITILNSLQLREEPAQYATTRQDPL--TLWVEAYYRFTEAEREQVISFIFREGAKSLIERLEMD---
>UniRef50_B0UVF4(6-114:145) Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336 RepID=B0UVF4_HAES2  E=2e-16 s/c=0.80 id=19% cov=95%
-TLKELLDVGGLpsTPQGIILYAKKDKWRRRRVSGVK-GNVFEYYVYDMPESVQTSLGVTKETLALKQELIDDIQKENEKFLNQILSD-----IKNVLLNSGVLRIRERLSITKEE
>UniRef50_A4JDI5(10-116:726) MuA-transposase/repressor protein CI, DNA-binding n=2 Tax=root RepID=A4JDI5_BURVG  E=7e-16 s/c=0.80 id=17% cov=91%
-TAPELAmlGLPGVptTEQGVRYSATREKWAARRRA---KGKGLEYALDSLPAEAQAAIRHRASAALVTSVPAQPAKAVIRREQQLQLVETDAQRLRAD-ARKGILSILDRI------
>UniRef50_A7JV30(7-79:656) Bacteriophage transposase n=1 Tax=Mannheimia haemolytica PHL213 RepID=A7JV30_PASHA  E=5e-09 s/c=0.85 id=29% cov=30%
--AKEIAGLSGVPelPNSVSRLATKEGWQKRQIQGVR-------------------------------------------------------------------------------
>UniRef50_B7UXK6(6-100:689) Transposase A n=6 Tax=root RepID=B7UXK6_PSEA8   E=9e-08 s/c=0.61 id=23% cov=23%
-SAQELAGLPGVpgTARNVKAMAERKSW----------------------------------------------------------------------------------------
>UniRef50_A6W3I3(7-106:216) Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3I3_MARMS  E=1e-07 s/c=0.58 id=23% cov=31%
-TAAELAGQKGMPAHATNvtRKAKSQNWEYRQITGLR-------------------------------------------------------------------------------
>UniRef50_C4LBA7(7-95:741) Integrase catalytic region n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LBA7_TOLAT  E=6e-07 s/c=0.62 id=28% cov=34%
----ELAGLVGLPqyQDGVRKKADREDWKNRKR---ESGKGLEYHIS---------------------------------------------------------------------
>UniRef50_C5S4Q8(6-73:663) Putative phage transposase n=1 Tax=Actinobacillus minor NM305 RepID=C5S4Q8_9PAST  E=1e-06 s/c=0.79 id=36% cov=32%
-SASDLAGVKGMpsSPQGVNKKARQELWQKQQQIGKQG------------------------------------------------------------------------------
>UniRef50_B8FD28(7-84:682) Transposase-like Mu n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD28_DESAA  E=7e-05 s/c=0.62 id=34% cov=33%
VTCSQLAQVIGQHRSTVLRRAQKEGWAFHEIANRQGG-----------------------------------------------------------------------------
>UniRef50_C6CJR2(13-120:136) MuA-transposase/repressor protein CI DNA-binding n=9 Tax=Enterobacteriaceae RepID=C6CJR2_DICZE  E=2e-24 s/c=1.05 id=25% cov=93%
-TTNELLGVAGLPksRQGLNKKAKDHGWERRRRKGVQ-GKGVEYAIWSLPEEVKTTL-MRETSPDYAVVTPTNVQESTWIQIYHQLSVEERTRLIGHILREGAMGMLARL------
>UniRef50_C4XBN9(8-126:130) Putative negative regulator n=7 Tax=Enterobacteriaceae RepID=C4XBN9_KLEPN  E=6e-23 s/c=0.91 id=47% cov=96%
MTPAELADCLGLARQTINRWVREKQWRTEAIPGVKGGRARLVVIDQPVREFLTNIPARrhlltdnhlaESPGAYLVNEADAIWRQIT-ETLQLMTPAEQLQLRDLLAREGISGFLARLGI----
>UniRef50_C5B7F4(7-113:114) MuA-transposase/repressor protein CI DNA-binding n=2 Tax=Edwardsiella RepID=C5B7F4_EDWI9  E=1e-22 s/c=1.00 id=33% cov=93%
-SAKELAGIGGFpsTPQAINQRAKSEGWRRQRRSGVQ-GKAVEYHISCFPPEVVDELLARDEQAQYLISS--NQPEKVWYSILLQMSEEERKKVTSLILRIGINEFLRRLG-----
>UniRef50_P27238(8-129:130) Uncharacterized protein yfeD n=96 Tax=Enterobacteriaceae RepID=YFED_ECOLI  E=3e-22 s/c=0.87 id=42% cov=99%
MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTpafhntpmlmEAEERIAEYA-PGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDES-
>UniRef50_B6XCH8(6-110:118) Putative uncharacterized protein n=3 Tax=Providencia RepID=B6XCH8_9ENTR  E=8e-21 s/c=0.96 id=21% cov=90%
LTAKELVGRQGLPSstQGINAMARRENWLSRKRRGIQ-GKALEYHISSIPIDLEEPTVMYEAPRIYHV--KRDEHAHIWQEAYNQLSHDERVAVLSFIMRKGALALI---------
>UniRef50_A8G8Y9(1-90:90) Putative uncharacterized protein n=1 Tax=Serratia proteamaculans 568 RepID=A8G8Y9_SERP5  E=9e-20 s/c=1.09 id=27% cov=78%
--------------------ARREGWNSRRRKGVQ-GKALEYHIDSLPAGTRNLLVLKEEPASYQVERKDPL--VVWIEYYYHLTECEREKVLAFLIREGIGSLLARISAD---
>UniRef50_P07040(12-123:174) Repressor protein CI n=3 Tax=root RepID=RPC1_BPD10   E=9e-18 s/c=0.82 id=22% cov=90%
--AKELEGMPGVPKLATNitRKAVAEDWVKRQRHG-GKGVAYEYHINSLPEETRRAIKGASLSDKPVHTSIVHTVDERLIYAMSFLTPDEQAAAVEIIRVAGIKGLM---------
>UniRef50_D2YK71(7-110:748) Transposase, putative n=1 Tax=Vibrio mimicus VM573 RepID=D2YK71_VIBMI  E=3e-15 s/c=0.80 id=27% cov=89%
-TSTELAGLPGLpsTDRNVRIKAEKENWEKRPR---EIGKGFEYHIRSFPMETIAHLSR-------DFLQQKSEGELAAEKLVAELAAKEQAKKRHVLnASQGAMRLLNTLKAED--
>UniRef50_UPI0001699232(5-112:150) hypothetical protein Epers_01870 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699232  E=7e-15 s/c=0.76 id=23% cov=93%
LTAAELAGLPGMpgTPRSVNRAGDRGEIERRKKA---KGKGWEYSLTSLPAETQRYLT-RTAAAEIAKAAPPQPPAPIELPLMPDLTDWQREQMHARLAVlSVIDELAQRLG-----
>UniRef50_P07636(5-65:663) Transposase n=8 Tax=root RepID=TRA_BPMU   E=5e-11 s/c=1.13 id=35% cov=35%
VSPKECANLPGLPKTsaGVIYVAKKQGWQNRTRAGVKGGKA---------------------------------------------------------------------------
>UniRef50_B8GS44(10-88:671) Transposase A n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GS44_THISH  E=3e-08 s/c=0.75 id=26% cov=33%
-SAKALAGLPGMpgTQQNVTAKAKRDGWACRKRSGKGGGR----------------------------------------------------------------------------
>UniRef50_A9L0K4(7-101:738) Integrase catalytic region n=2 Tax=Shewanella baltica RepID=A9L0K4_SHEB9  E=8e-08 s/c=0.61 id=22% cov=32%
-STVEIAELLDVGDRRVRDRAKQENWQKQRRQGLGGG-----------------------------------------------------------------------------
>UniRef50_Q8EJ30(7-111:715) Transposase, putative n=1 Tax=Shewanella oneidensis RepID=Q8EJ30_SHEON  E=1e-07 s/c=0.55 id=33% cov=32%
-SPQELLQLPGMptTVQGIRFKAKTESWESRKKEGSKG------------------------------------------------------------------------------
>UniRef50_A7JUV9(11-101:176) Possible transposase n=1 Tax=Mannheimia haemolytica PHL213 RepID=A7JUV9_PASHA  E=3e-07 s/c=0.62 id=39% cov=32%
-SAKELAElslaCLPKTKQGVLYQAKKQGWTTHKKVGV-GG-----------------------------------------------------------------------------
>UniRef50_A9D2T9(6-70:647) Transposase, putative n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2T9_9RHIZ  E=6e-07 s/c=0.85 id=41% cov=24%
-TPKEIADAAGVSERAINQMARKSHWR---------------------------------------------------------------------------------------
>UniRef50_B4TBP2(7-113:124) Putative cytoplasmic protein n=33 Tax=Salmonella enterica RepID=B4TBP2_SALHS  E=8e-07 s/c=0.51 id=25% cov=32%
----------------------------------------------------------EEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVT---------------------
>UniRef50_A6D441(7-62:230) Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D441_9VIBR  E=4e-06 s/c=0.94 id=25% cov=28%
--ASELMDLPGMPSsnSGIAQKAKRDGWKSRKTRG---------------------------------------------------------------------------------
>UniRef50_O05069(14-106:687) Mu-like prophage FluMu transposase A n=5 Tax=Pasteurellaceae RepID=TRA_HAEIN  E=3e-05 s/c=0.53 id=29% cov=30%
----ELANLklktLPSAPKNIWEQAKRENWKSQKRQGRGGG-----------------------------------------------------------------------------
>UniRef50_B7UGE5(4-106:680) Predicted DNA transposition protein n=2 Tax=Enterobacteriaceae RepID=B7UGE5_ECO27  E=5e-05 s/c=0.48 id=29% cov=36%
-SANELAGLPGLpgTVQGVrwtlNRITETHpEWKRKR----EGTKAFEYHID---------------------------------------------------------------------
>UniRef50_B6IMZ2(45-127:191) Mu transposase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IMZ2_RHOCS  E=0.0004 s/c=0.55 id=33% cov=32%
-SAAELAGvrLPGLpaTKAGITRLARAEAWRVREVHGR-GG-----------------------------------------------------------------------------
>UniRef50_A9ICZ8(8-108:653) Transposase A n=1 Tax=Bordetella petrii DSM 12804 RepID=A9ICZ8_BORPD  E=0.0009 s/c=0.44 id=30% cov=29%
--AQELAGLPAMpaTVQGINHRAKTSAWQSRPRAGR--------------------------------------------------------------------------------
>UniRef50_C2LKG3(7-112:115) MuA-transposase/repressor protein CI, DNA-binding n=5 Tax=Enterobacteriaceae RepID=C2LKG3_PROMI  E=7e-22 s/c=0.98 id=25% cov=92%
-TAMELTGIGGLPksPQGVNAKAKRESWLKQKRTNKQ-GNGVEYHYSCLPEETLIALELYEPLAHYKLNKE--EPLVIWVKAFQQLNDGEQKTVTELILRDGIRSFLEKI------
>UniRef50_Q0EWA9(5-115:742) Transposase and inactivated derivative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWA9_9PROT  E=2e-16 s/c=0.78 id=25% cov=89%
MPASELAGLPGLpgTDRGIRKLADREGWQSRKR---QKGKGLEYSPSSLPEVTRTHLAHlsvkaamdeVSKQPEYAQYAEAEPVESIPGVKTREMLDEEAAEHRRLIAR-GIAEF----------
>UniRef50_C0N301(10-100:722) Mu DNA binding, I gamma subdomain family n=5 Tax=Gammaproteobacteria RepID=C0N301_9GAMM  E=2e-10 s/c=0.74 id=37% cov=33%
-TATELANKPGLPkyKRGVNQQASKQGWNTRQVK-VRGGSA---------------------------------------------------------------------------
>UniRef50_Q58ZD8(5-117:669) MuA transposase subunit-like protein n=6 Tax=Haemophilus influenzae RepID=Q58ZD8_HAEIN  E=7e-10 s/c=0.58 id=39% cov=33%
VTAKEIAGIGGLSkhPTNVNRLARKEKWIFREIQGVQGG-----------------------------------------------------------------------------
>UniRef50_C4U3A5(5-73:73) Phage-related DNA-binding protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U3A5_YERKR  E=4e-09 s/c=0.90 id=38% cov=28%
-----------------------------------------------------------------------------INAFKQLTPSERYKFSEYILREGIISIYKNL------
>UniRef50_B8DK74(9-125:732) Transposase-like Mu n=3 Tax=Desulfovibrio vulgaris RepID=B8DK74_DESVM  E=6e-07 s/c=0.47 id=38% cov=32%
-TTRDLLPLLGIsSESTVIRRASREGWTSRPRKGRGGG-----------------------------------------------------------------------------
>UniRef50_D2BRS4(7-124:140) MuA-transposase/repressor protein CI DNA-binding protein n=6 Tax=Enterobacteriaceae RepID=D2BRS4_DICD5  E=2e-22 s/c=0.90 id=24% cov=94%
-TTNELLGVAGLPksRQGLNKKAKDHGWERRRRKGVQ-GKGVEYAIWSLPEEVKATLmratlmgttLMRETAPDYVSAASAGAQEYTWIQIYHQLSAEERTRLIGHILREGAMSVLARL------
>UniRef50_A7MKV6(8-129:129) Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MKV6_ENTS8  E=2e-18 s/c=0.76 id=35% cov=100%
MTAGELGELSGYTAQAISRWARKYGWKRIPLKGRKGG-ALLILITQQVYDYFLATDKLRYSAHlynrieetpAPYVTWDNEMMAQFIRTLEMLSPQEQARLSELISEEGAAGLVKRLGLRDEK
>UniRef50_Q2LQD6(14-126:754) Transposase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQD6_SYNAS   E=3e-11 s/c=0.62 id=23% cov=86%
-SAKELAVIMGISWQAIQKRADQEGWPCEMETGR-GGKRKLFRRAVLPVDWQARIARQRAAQAAAAIAPESPEMAGYRAARNYLEDLEREKEEKRLIKE---------------
>UniRef50_B0US86(9-98:662) Transposase-like Mu n=20 Tax=Pasteurellaceae RepID=B0US86_HAES2   E=1e-06 s/c=0.60 id=19% cov=23%
------------TKKAVIDKAKRENWQSRKRVGRGGG-----------------------------------------------------------------------------
>UniRef50_Q38452(7-48:48) Transposase (Fragment) n=1 Tax=Pseudomonas phage D3112 RepID=Q38452_BPD31  E=0.0001 s/c=1.14 id=33% cov=32%
--PTKLAGLPGLptTDRGVRKLAEREGWKKQKHSGRGGG-----------------------------------------------------------------------------
