Phyre 2 alignment of P0AD37 with d1tnsa_

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Job Description | P0AD37
Confidence | 99.82% | Date | Thu Jan 5 11:19:54 GMT 2012
Rank | 1 | Aligned Residues | 66
% Identity | 29% | Template | d1tnsa_
SCOP info | Putative DNA-binding domain | Putative DNA-binding domain | Excisionase-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | T | P | D | E | L | A | R | L | T | G | Y | . | . | S | R | Q | T | I | N | K | W | V | R | K | E | G | W | T | T | S | P | K | P | G | V | Q | G | G | K | A | R | L | V | H | V | N | E | Q | V | R | E | Y | I | R | N | A | E | R | P | E | G | Q | G | E | A | P | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | S | P | K | E | L | A | N | L | P | G | L | P | K | T | S | A | G | V | I | Y | V | A | K | K | Q | G | W | Q | N | R | T | R | A | G | V | K | G | G | K | A | I | E | Y | N | A | N | S | L | P | V | E | A | K | A | A | L | L | L | R | Q | G | E | I | E | T | S | L
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  | S | S | S |  | S | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | S | S | S | S |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  | S | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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