BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (402 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A1J2 Flagellar hook protein flgE n=279 Tax=Proteobact... 692 0.0 UniRef50_C4U020 Flagellar hook protein FlgE n=2 Tax=Yersinia Rep... 494 e-138 UniRef50_A4TKA1 Flagellar hook protein FlgE n=34 Tax=Enterobacte... 492 e-138 UniRef50_D0FQ44 Flagellar hook protein FlgE n=2 Tax=Erwinia pyri... 367 e-100 UniRef50_C4SBL3 Flagellar basal body FlaE domain protein n=2 Tax... 367 e-100 UniRef50_B2AI79 FlgE: Flagellar hook protein n=6 Tax=Betaproteob... 339 8e-92 UniRef50_Q8D3G0 FlgE protein n=2 Tax=Enterobacteriaceae RepID=Q8... 330 8e-89 UniRef50_A9IKQ4 FlgE protein n=2 Tax=Bordetella RepID=A9IKQ4_BORPD 323 7e-87 UniRef50_A1K948 FlgE protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K... 290 9e-77 UniRef50_B2UJX1 Flagellar basal body FlaE domain protein n=3 Tax... 288 3e-76 UniRef50_A2SKD4 Flagellar basal body and hook protein n=3 Tax=Be... 280 5e-74 UniRef50_Q47I23 Putative uncharacterized protein n=1 Tax=Dechlor... 277 4e-73 UniRef50_Q1QW31 Flagellar basal body FlaE n=2 Tax=Gammaproteobac... 272 1e-71 UniRef50_C6WVA7 Flagellar basal body FlaE domain protein n=3 Tax... 271 4e-71 UniRef50_Q8K9K6 Flagellar hook protein flgE n=4 Tax=Buchnera aph... 267 5e-70 UniRef50_B1K372 Flagellar basal body FlaE domain protein n=54 Ta... 267 5e-70 UniRef50_C6MIR8 Putative uncharacterized protein n=1 Tax=Nitroso... 267 6e-70 UniRef50_A1WFE3 Flagellar basal body FlaE domain protein n=7 Tax... 263 9e-69 UniRef50_A4G6B1 Flagellar hook protein FlgE n=8 Tax=Betaproteoba... 260 8e-68 UniRef50_B9Z359 Flagellar basal body FlaE domain protein n=1 Tax... 259 1e-67 UniRef50_Q7NU18 Flagellar hook protein flgE n=1 Tax=Chromobacter... 259 1e-67 UniRef50_C5SD65 Putative uncharacterized protein n=1 Tax=Allochr... 257 5e-67 UniRef50_C6NYI1 Flagellar hook protein flgE n=1 Tax=Acidithiobac... 253 1e-65 UniRef50_Q0AJ53 Flagellar basal body FlaE domain protein n=1 Tax... 251 2e-65 UniRef50_A4BQF0 Flagellar hook protein n=1 Tax=Nitrococcus mobil... 251 4e-65 UniRef50_D0I440 Flagellar hook protein FlgE n=1 Tax=Grimontia ho... 246 8e-64 UniRef50_Q48GC0 Flagellar hook protein FlgE n=10 Tax=Pseudomonas... 246 1e-63 UniRef50_Q0AA87 Flagellar basal body FlaE domain protein n=1 Tax... 245 2e-63 UniRef50_B0RT16 Complete genome, strain B100 n=13 Tax=Xanthomona... 244 4e-63 UniRef50_C4KAU4 Flagellar basal body FlaE domain protein n=1 Tax... 244 5e-63 UniRef50_A4A615 Flagellar hook protein FlgE n=3 Tax=unclassified... 242 2e-62 UniRef50_D2TJ84 Lateral flagellar hook protein n=1 Tax=Citrobact... 239 2e-61 UniRef50_Q5DY15 Lateral flagellar hook protein (FlgE-like) n=39 ... 238 3e-61 UniRef50_A8GYL4 Flagellar basal body FlaE domain protein n=13 Ta... 238 4e-61 UniRef50_A1WUE2 Flagellar basal body FlaE domain protein n=1 Tax... 236 1e-60 UniRef50_A1T0J3 Flagellar hook protein FlgE n=18 Tax=Gammaproteo... 234 3e-60 UniRef50_A5V5R7 Flagellar basal body FlaE domain protein n=1 Tax... 231 3e-59 UniRef50_A6GSX9 Flagellar hook protein E n=1 Tax=Limnobacter sp.... 231 4e-59 UniRef50_D0L1M3 Flagellar hook-basal body protein n=5 Tax=Chroma... 227 7e-58 UniRef50_A0YG82 Flagellar hook protein n=1 Tax=marine gamma prot... 223 1e-56 UniRef50_Q1I728 Flagellar hook protein FlgE n=8 Tax=Pseudomonas ... 222 2e-56 UniRef50_Q5ZW68 Flagellar hook protein FlgE n=5 Tax=Legionella R... 220 7e-56 UniRef50_B4UFG1 Putative uncharacterized protein n=3 Tax=Anaerom... 215 3e-54 UniRef50_Q74G30 Flagellar hook protein FlgE n=2 Tax=Geobacter Re... 214 4e-54 UniRef50_A3JJM5 Flagellar hook protein E n=1 Tax=Marinobacter sp... 212 2e-53 UniRef50_C1DW30 Flagellar hook protein FlgE n=3 Tax=Sulfurihydro... 211 5e-53 UniRef50_A3NFX5 Flagellar hook protein FlgE n=13 Tax=Betaproteob... 210 7e-53 UniRef50_A4SL12 Flagellar hook protein FlgE n=3 Tax=Gammaproteob... 207 4e-52 UniRef50_Q3A5C5 Flagellar biosynthesis, hook protein n=2 Tax=Des... 204 4e-51 UniRef50_C6NWL1 Flagellar hook protein flgE n=2 Tax=Proteobacter... 204 4e-51 UniRef50_B4RV33 Flagellar hook protein n=29 Tax=Gammaproteobacte... 201 4e-50 UniRef50_A7K5D1 Flagellar hook protein FlgE n=56 Tax=Vibrionales... 199 1e-49 UniRef50_B5YIG4 Flagellar hook protein FlgE n=1 Tax=Thermodesulf... 199 1e-49 UniRef50_B8KBZ1 Flagellar hook protein n=6 Tax=Vibrionaceae RepI... 197 4e-49 UniRef50_A0LT62 Putative uncharacterized protein n=2 Tax=Actinom... 197 7e-49 UniRef50_D1TF51 Flagellar hook protein (Fragment) n=1 Tax=Burkho... 195 3e-48 UniRef50_A6F9Q0 Flagellar hook protein n=2 Tax=Gammaproteobacter... 194 4e-48 UniRef50_Q15R85 Flagellar basal body FlaE n=1 Tax=Pseudoalteromo... 194 5e-48 UniRef50_D2S9L8 Flagellar hook-basal body protein n=3 Tax=Actino... 193 8e-48 UniRef50_C8WYV8 Fagellar hook-basal body protein n=1 Tax=Desulfo... 191 3e-47 UniRef50_A6W8K5 Putative uncharacterized protein n=1 Tax=Kineoco... 191 4e-47 UniRef50_B7R866 Flagellar basal body protein FlgE n=10 Tax=Therm... 191 5e-47 UniRef50_A8VS11 DNA topoisomerase I n=1 Tax=Bacillus selenitired... 190 8e-47 UniRef50_D2LSH1 Putative uncharacterized protein n=1 Tax=Bacillu... 189 1e-46 UniRef50_B9MM16 Putative uncharacterized protein n=2 Tax=Clostri... 189 2e-46 UniRef50_Q1IR53 Flagellar basal body FlaE n=2 Tax=Acidobacteria ... 187 6e-46 UniRef50_Q1ZPI3 Flagellar hook protein n=3 Tax=Photobacterium Re... 187 8e-46 UniRef50_Q3J1S9 Flagellar hook protein FlgE n=5 Tax=Rhodobacter ... 184 5e-45 UniRef50_A6DYV2 Flagellar hook protein FlgE n=1 Tax=Roseovarius ... 184 5e-45 UniRef50_C6P7Q7 Putative uncharacterized protein n=1 Tax=Thermoa... 183 1e-44 UniRef50_UPI0001850C8F flagellar hook protein FlgE n=1 Tax=Bacil... 182 2e-44 UniRef50_A8MHE5 Putative uncharacterized protein n=2 Tax=Alkalip... 182 3e-44 UniRef50_B0THB1 Flagellar hook protein n=1 Tax=Heliobacterium mo... 180 9e-44 UniRef50_A1HN32 Putative uncharacterized protein n=1 Tax=Thermos... 179 1e-43 UniRef50_Q6MHY9 FlgE protein n=1 Tax=Bdellovibrio bacteriovorus ... 179 1e-43 UniRef50_D1NM00 Fagellar hook-basal body protein n=5 Tax=Clostri... 179 2e-43 UniRef50_Q9X5Y0 Flagellar hook protein flgE n=2 Tax=Rhizobiaceae... 178 2e-43 UniRef50_Q44767 Flagellar hook protein flgE n=26 Tax=Spirochaeta... 173 1e-41 UniRef50_Q0EZL8 Putative uncharacterized protein n=1 Tax=Maripro... 172 2e-41 UniRef50_B6R7Z8 Flagellar hook protein FlgE n=1 Tax=Pseudovibrio... 172 2e-41 UniRef50_B9L4C8 Flagellar hook protein FlgE n=3 Tax=Bacteria Rep... 172 2e-41 UniRef50_Q1YLP3 Putative flagellar hook protein FlgE n=1 Tax=Aur... 171 4e-41 UniRef50_Q7WA94 Flagellar hook protein FlgE n=3 Tax=Bordetella R... 171 4e-41 UniRef50_Q04UG8 Endoflagellar hook protein n=7 Tax=Spirochaetale... 171 5e-41 UniRef50_B6AMB9 Probable flagellar hook protein FlgE n=2 Tax=Lep... 169 2e-40 UniRef50_B9JZL6 Flagellar hook protein n=1 Tax=Agrobacterium vit... 167 8e-40 UniRef50_C7LUH2 Putative uncharacterized protein n=1 Tax=Desulfo... 166 1e-39 UniRef50_C9LSP4 Flagellar hook protein FlgE n=1 Tax=Selenomonas ... 165 2e-39 UniRef50_Q6AGA2 Flagellar hook protein n=1 Tax=Leifsonia xyli su... 164 4e-39 UniRef50_C6HWM7 Probable flagellar hook protein FlgE n=1 Tax=Lep... 163 9e-39 UniRef50_B1XWJ5 Putative uncharacterized protein n=1 Tax=Leptoth... 160 6e-38 UniRef50_D1TKK3 Putative flagellar hook protein FlgE n=1 Tax=Bur... 159 2e-37 UniRef50_Q67K22 Flagellar hook protein n=1 Tax=Symbiobacterium t... 156 1e-36 UniRef50_UPI00016C5508 hypothetical protein GobsU_27906 n=1 Tax=... 156 1e-36 UniRef50_C1DC21 Flagellar hook protein FlgE n=1 Tax=Laribacter h... 155 2e-36 UniRef50_B1M7H7 Flagellar basal body FlaE domain protein n=8 Tax... 155 2e-36 UniRef50_C4Z5G6 Flagellar hook protein FlgE n=2 Tax=Clostridiale... 155 3e-36 UniRef50_A6X6N9 Flagellar basal body FlaE domain protein n=1 Tax... 154 4e-36 UniRef50_O07884 Flagellar hook protein flgE n=7 Tax=Treponema Re... 154 4e-36 UniRef50_Q2RZC6 Flagellar biosynthesis cell-distal portion of ba... 154 5e-36 UniRef50_C7M216 Putative uncharacterized protein n=1 Tax=Acidimi... 153 9e-36 UniRef50_A1UTT0 Flagellar hook protein FlgE n=1 Tax=Bartonella b... 153 1e-35 UniRef50_Q0AYM8 Flagellar hook protein n=1 Tax=Syntrophomonas wo... 153 1e-35 UniRef50_A4BEL5 Flagellar hook protein FlgE n=2 Tax=cellular org... 152 2e-35 UniRef50_C5V017 Putative uncharacterized protein n=1 Tax=Gallion... 151 3e-35 UniRef50_C6QF26 Flagellar basal body FlaE domain protein n=1 Tax... 151 4e-35 UniRef50_A0LDL2 Putative uncharacterized protein n=1 Tax=Magneto... 150 9e-35 UniRef50_Q1N302 Flagellar hook protein FlgE n=3 Tax=Proteobacter... 149 1e-34 UniRef50_Q1MRH2 Flagellar hook protein FlgE n=6 Tax=Desulfovibri... 149 1e-34 UniRef50_Q01PQ4 Putative uncharacterized protein n=1 Tax=Candida... 149 2e-34 UniRef50_A6CQ97 Flagellar hook protein n=1 Tax=Bacillus sp. SG-1... 148 3e-34 UniRef50_Q11LP2 Flagellar basal body FlaE n=7 Tax=Alphaproteobac... 148 4e-34 UniRef50_O52070 Flagellar hook protein flgE n=37 Tax=Rhizobiales... 147 7e-34 UniRef50_Q21IK9 Flagellar basal body FlaE n=3 Tax=Bacteria RepID... 145 2e-33 UniRef50_A0AGF2 Complete genome n=21 Tax=Listeria RepID=A0AGF2_L... 145 2e-33 UniRef50_Q2SDU1 Flagellar hook protein FlgE n=3 Tax=Gammaproteob... 145 3e-33 UniRef50_B7HLV4 Flagellar hook protein n=32 Tax=Bacillus cereus ... 144 7e-33 UniRef50_A0Q031 Flagellar basal-body rod protein FlgG n=1 Tax=Cl... 144 7e-33 UniRef50_B9MGE1 Flagellar basal body FlaE domain protein n=3 Tax... 143 1e-32 UniRef50_Q63D88 Flagellar hook protein n=35 Tax=Bacillus cereus ... 143 1e-32 UniRef50_Q0G073 Flagellar hook protein E n=1 Tax=Fulvimarina pel... 143 1e-32 UniRef50_UPI0001BCD67A flagellar hook protein FlgE n=1 Tax=Selen... 143 1e-32 UniRef50_C5BRS0 Flagellar basal body protein FlgE n=1 Tax=Teredi... 142 2e-32 UniRef50_B2JJ19 Flagellar basal body FlaE domain protein n=6 Tax... 142 3e-32 UniRef50_Q9ZKY0 Flagellar hook protein flgE n=23 Tax=Helicobacte... 140 6e-32 UniRef50_A5W0G4 Flagellar basal body FlaE domain protein n=3 Tax... 140 7e-32 UniRef50_Q6AJT3 Related to flagellar hook protein (FlgE) n=1 Tax... 140 8e-32 UniRef50_Q2KCE1 Flagellar hook protein n=27 Tax=Alphaproteobacte... 140 1e-31 UniRef50_C2PD26 Flagellar hook protein FlgE n=1 Tax=Bacillus cer... 140 1e-31 UniRef50_C5SQ30 Putative uncharacterized protein n=1 Tax=Asticca... 139 2e-31 UniRef50_A7GVS8 Flagellar hook protein FlgE n=2 Tax=Campylobacte... 137 7e-31 UniRef50_C5CYE8 Putative uncharacterized protein n=1 Tax=Variovo... 137 9e-31 UniRef50_Q5FS48 Flagellar hook protein FlgE n=2 Tax=cellular org... 137 9e-31 UniRef50_A9KNF2 Putative uncharacterized protein n=1 Tax=Clostri... 137 9e-31 UniRef50_Q07TK1 Flagellar basal body FlaE domain protein n=8 Tax... 137 1e-30 UniRef50_D1U447 Putative uncharacterized protein n=1 Tax=Desulfo... 136 1e-30 UniRef50_Q48GC1 Flagellar basal-body protein, putative n=6 Tax=P... 136 2e-30 UniRef50_Q12T69 Putative uncharacterized protein n=1 Tax=Shewane... 135 4e-30 UniRef50_Q89F43 Flagellar hook protein n=1 Tax=Bradyrhizobium ja... 134 8e-30 UniRef50_Q6LW64 Hypothetical flagellar hook protein FlgE n=1 Tax... 133 1e-29 UniRef50_A6W1A3 Putative uncharacterized protein n=2 Tax=Marinom... 132 3e-29 UniRef50_Q1YV97 Flagellar hook protein FlgE n=1 Tax=gamma proteo... 131 4e-29 UniRef50_D2M8A9 Flagellar basal body FlaE domain protein n=1 Tax... 130 1e-28 UniRef50_A0NPJ1 Putative uncharacterized protein n=1 Tax=Labrenz... 129 1e-28 UniRef50_A7GNH9 Putative uncharacterized protein n=1 Tax=Bacillu... 129 2e-28 UniRef50_Q24T89 Putative uncharacterized protein n=1 Tax=Desulfi... 129 2e-28 UniRef50_D1B6B8 Putative uncharacterized protein n=1 Tax=Therman... 129 3e-28 UniRef50_B9L651 Flagellar hook protein FlgE n=2 Tax=Nautiliaceae... 128 4e-28 UniRef50_Q485P3 Flagellar hook protein FlgE n=1 Tax=Colwellia ps... 127 7e-28 UniRef50_C4ZAN8 Flagellar hook protein n=1 Tax=Eubacterium recta... 126 1e-27 UniRef50_A7HW68 Putative uncharacterized protein n=1 Tax=Parviba... 125 2e-27 UniRef50_C5SMJ1 Putative uncharacterized protein n=1 Tax=Asticca... 125 3e-27 UniRef50_Q30UL8 Flagellar hook FlgE n=2 Tax=Campylobacterales Re... 125 3e-27 UniRef50_B9CY95 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 124 4e-27 UniRef50_B7RBK4 Flagellar hook protein n=3 Tax=Thermotogaceae Re... 124 4e-27 UniRef50_B9R0M9 Conserved domain protein n=1 Tax=Labrenzia alexa... 124 5e-27 UniRef50_C6RJ18 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 124 5e-27 UniRef50_D2C6I0 Fagellar hook-basal body protein n=3 Tax=Thermot... 124 6e-27 UniRef50_B8J3H7 Putative uncharacterized protein n=1 Tax=Desulfo... 124 8e-27 UniRef50_A8TLX3 Flagellar basal body FlaE domain protein n=1 Tax... 123 2e-26 UniRef50_A0RRQ1 Flagellar hook protein FlgE n=4 Tax=Proteobacter... 122 2e-26 UniRef50_Q1JZT1 Putative uncharacterized protein n=1 Tax=Desulfu... 122 3e-26 UniRef50_Q2BQT8 Flagellar hook protein (FlgE)-like n=1 Tax=Neptu... 121 5e-26 UniRef50_Q28JM2 Flagellar hook protein FlgE putative n=30 Tax=Ba... 121 5e-26 UniRef50_A7HN97 Putative uncharacterized protein n=1 Tax=Fervido... 121 6e-26 UniRef50_B1TBA9 Putative uncharacterized protein n=1 Tax=Burkhol... 120 1e-25 UniRef50_C3XKG1 Flagellar hook protein FlgE n=1 Tax=Helicobacter... 120 1e-25 UniRef50_C6XF46 Flagellar hook protein FlgE n=1 Tax=Candidatus L... 120 1e-25 UniRef50_Q2CGG5 Flagellar hook protein FlgE, putative n=3 Tax=Rh... 120 1e-25 UniRef50_C5RFU7 Putative uncharacterized protein n=1 Tax=Clostri... 119 2e-25 UniRef50_Q5HS69 Flagellar hook protein n=15 Tax=Campylobacter Re... 119 3e-25 UniRef50_A5FUQ6 Flagellar basal body FlaE domain protein n=1 Tax... 118 3e-25 UniRef50_D1B5D3 Flagellar hook protein FlgE n=1 Tax=Sulfurospiri... 118 3e-25 UniRef50_B7IDJ5 Flagellar hook protein FlgE n=2 Tax=Thermosipho ... 118 3e-25 UniRef50_B4RG77 Flagellar hook protein FlgE n=1 Tax=Phenylobacte... 118 4e-25 UniRef50_D0XTV6 Flagellar basal body FlaE domain protein n=1 Tax... 117 6e-25 UniRef50_Q1PUJ3 Similar to flagellar hook protein n=1 Tax=Candid... 117 1e-24 UniRef50_C5ZVV6 Flagellar hook protein n=2 Tax=Helicobacter RepI... 117 1e-24 UniRef50_D1U366 Putative uncharacterized protein n=1 Tax=Desulfo... 116 1e-24 UniRef50_B7ATR6 Putative uncharacterized protein n=1 Tax=Bactero... 115 2e-24 UniRef50_B8CYR1 Flagellar hook protein FlgE, epsilon proteobacte... 115 3e-24 UniRef50_B6IQC5 Flagellar hook protein FlgE n=1 Tax=Rhodospirill... 115 3e-24 UniRef50_A9BEX9 Putative uncharacterized protein n=1 Tax=Petroto... 115 3e-24 UniRef50_C1TKJ0 Flagellar hook protein FlgE n=1 Tax=Dethiosulfov... 115 4e-24 UniRef50_A7H673 Flagellar hook protein n=8 Tax=Campylobacter jej... 115 4e-24 UniRef50_B7GGB1 Flagellar hook protein FlgE n=1 Tax=Anoxybacillu... 114 5e-24 UniRef50_B8DS27 Putative uncharacterized protein n=1 Tax=Desulfo... 114 6e-24 UniRef50_A4U4J9 Flagellar hook protein FlgE n=1 Tax=Magnetospiri... 114 6e-24 UniRef50_B5Y7E4 Flagellar hook protein FlgE n=1 Tax=Coprothermob... 114 8e-24 UniRef50_B5J6Y8 Conserved domain protein n=3 Tax=cellular organi... 114 8e-24 UniRef50_C0QPA5 Flagellar basal body and hook protein FlgE n=1 T... 113 1e-23 UniRef50_Q31FL0 Flagellar hook protein FlgE n=1 Tax=Thiomicrospi... 113 1e-23 UniRef50_C6BZU9 Putative uncharacterized protein n=1 Tax=Desulfo... 112 2e-23 UniRef50_A4WW59 Putative uncharacterized protein n=4 Tax=Rhodoba... 112 2e-23 UniRef50_A9DSB3 Flagellar hook protein FlgE n=1 Tax=Oceanibulbus... 112 2e-23 UniRef50_C4V4D1 Flagellar hook protein FlgE n=2 Tax=Selenomonas ... 111 4e-23 UniRef50_C6BXM1 Putative uncharacterized protein n=1 Tax=Desulfo... 111 4e-23 UniRef50_Q2LSZ5 Flagellar hook protein n=1 Tax=Syntrophus acidit... 111 5e-23 UniRef50_B2A353 Putative uncharacterized protein n=1 Tax=Natrana... 110 8e-23 UniRef50_C6XM57 Putative uncharacterized protein n=1 Tax=Hirschi... 110 1e-22 UniRef50_D0XNJ6 Putative uncharacterized protein n=1 Tax=Brevund... 109 1e-22 UniRef50_C7LRK3 Putative uncharacterized protein n=2 Tax=Desulfo... 108 3e-22 UniRef50_D2L1Z5 Putative uncharacterized protein n=1 Tax=Desulfo... 108 5e-22 UniRef50_C4XMS5 Flagellar hook protein FlgE n=1 Tax=Desulfovibri... 107 8e-22 UniRef50_A8U5X1 Flagellar hook protein n=1 Tax=Carnobacterium sp... 107 9e-22 UniRef50_A6Q2N3 Flagellar basal body and hook protein FlgE n=2 T... 107 9e-22 UniRef50_UPI0001C35D09 hypothetical protein ChatD1_21894 n=1 Tax... 107 1e-21 UniRef50_Q1MQV7 Flagellar hook protein FlgE n=1 Tax=Lawsonia int... 107 1e-21 UniRef50_C1SLD6 Flagellar hook protein FlgE n=1 Tax=Denitrovibri... 106 2e-21 UniRef50_Q4JMN8 Predicted flagellar hook protein n=1 Tax=uncultu... 106 2e-21 UniRef50_Q2RRL4 Putative uncharacterized protein n=1 Tax=Rhodosp... 106 2e-21 UniRef50_B8FK43 Putative uncharacterized protein n=1 Tax=Desulfa... 105 2e-21 UniRef50_C1A555 Flagellar hook protein FlgE n=1 Tax=Gemmatimonas... 105 2e-21 UniRef50_Q7UII2 Flagellar hook protein FlgE n=1 Tax=Rhodopirellu... 104 5e-21 UniRef50_B0ULI9 Flagellar basal body FlaE domain protein n=10 Ta... 103 8e-21 UniRef50_C2BUK6 Flagellar basal body and hook protein n=3 Tax=Mo... 103 9e-21 UniRef50_Q1NLV6 Putative uncharacterized protein n=2 Tax=delta p... 103 9e-21 UniRef50_C0QAJ6 FlgE n=1 Tax=Desulfobacterium autotrophicum HRM2... 103 1e-20 UniRef50_A4C6G9 Flagellar hook protein n=2 Tax=Alteromonadales R... 103 1e-20 UniRef50_C8R2K5 Putative uncharacterized protein n=1 Tax=Desulfu... 103 1e-20 UniRef50_Q1NNN7 Putative uncharacterized protein n=2 Tax=delta p... 103 1e-20 UniRef50_C8QYQ3 Putative uncharacterized protein n=1 Tax=Desulfu... 102 3e-20 UniRef50_A1SEP1 Putative uncharacterized protein n=2 Tax=Actinom... 102 4e-20 UniRef50_D2R533 Flagellar basal body FlaE domain protein n=1 Tax... 101 6e-20 UniRef50_A8RWD3 Putative uncharacterized protein n=2 Tax=Clostri... 101 6e-20 UniRef50_A3UFN4 Flagellar hook protein n=2 Tax=Hyphomonadaceae R... 100 7e-20 UniRef50_A3SFR5 Putative flagellar hook protein n=2 Tax=Sulfitob... 100 7e-20 UniRef50_Q1NGN5 Flagellar basal-body rod protein FlgG n=2 Tax=Sp... 100 8e-20 UniRef50_B4U878 Putative uncharacterized protein n=1 Tax=Hydroge... 100 8e-20 UniRef50_Q2RRB3 Putative uncharacterized protein n=2 Tax=Rhodosp... 99 3e-19 UniRef50_B8J087 Putative uncharacterized protein n=1 Tax=Desulfo... 98 5e-19 UniRef50_C0GT28 Putative uncharacterized protein n=1 Tax=Desulfo... 97 1e-18 UniRef50_B9KEI8 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 97 1e-18 UniRef50_Q72C41 Flagellar hook protein FlgE n=3 Tax=Desulfovibri... 96 3e-18 UniRef50_B8CYN8 Flagellar basal-body rod protein FlgG n=2 Tax=Ba... 96 3e-18 UniRef50_B6BH25 Conserved domain protein n=2 Tax=Campylobacteral... 96 3e-18 UniRef50_UPI00016999D0 flagellar hook protein FlgE n=1 Tax=Endor... 95 4e-18 UniRef50_A1VXC8 Flagellar hook protein n=16 Tax=Campylobacter Re... 94 6e-18 UniRef50_B9K8L8 Flagellar basal-body rod protein FlgG n=106 Tax=... 94 7e-18 UniRef50_A6CER6 Flagellar hook protein FlgE n=2 Tax=Planctomyces... 94 8e-18 UniRef50_O67711 Flagellar hook protein flgE n=2 Tax=Aquificaceae... 94 9e-18 UniRef50_A3WGT9 Flagellar hook protein n=2 Tax=Erythrobacter Rep... 94 9e-18 UniRef50_Q310Y8 Flagellar hook protein FlgE n=3 Tax=Desulfovibri... 94 1e-17 UniRef50_A6BBC3 Flagellar hook protein (Fragment) n=2 Tax=Vibrio... 94 1e-17 UniRef50_B8FTP1 Putative uncharacterized protein n=1 Tax=Desulfi... 93 1e-17 UniRef50_B9L650 Flagellar basal body and hook protein n=1 Tax=Na... 93 2e-17 UniRef50_D2L5W2 Putative uncharacterized protein n=1 Tax=Desulfo... 92 4e-17 UniRef50_UPI00016C0DB8 hypothetical protein Epulo_06138 n=1 Tax=... 92 4e-17 UniRef50_B0MPE1 Putative uncharacterized protein n=1 Tax=Eubacte... 92 4e-17 UniRef50_C4XPF7 Flagellar hook protein FlgE n=1 Tax=Desulfovibri... 91 6e-17 >UniRef50_P0A1J2 Flagellar hook protein flgE n=279 Tax=Proteobacteria RepID=FLGE_SALTI Length = 403 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/404 (87%), Positives = 373/404 (92%), Gaps = 3/404 (0%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD Sbjct: 1 MSFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG+QLTGYP Sbjct: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 ATGTPPTIQQGANP I+IPNTLMAAK+TTTASMQINLNS+DP+P+ TPFS S+ADSYNK Sbjct: 121 ATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNK 180 Query: 181 KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD--PNSIAKTATTLEFNANGTLVD 238 KG+VTV+DSQGNAHDM+VYFVKT DN W VYT DSSD + +TTL+FN NG L Sbjct: 181 KGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNENGILES 240 Query: 239 GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 G NI TG INGA ATFSLSFLNSMQQNTGANNIVAT QNGYKPGDLVSYQIN+DGT Sbjct: 241 GGTV-NITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGT 299 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 VVGNYSNEQ Q+LGQIVLANFANNEGLAS+GDNVW+ATQ+SGVALLGTAG+GNFG LTNG Sbjct: 300 VVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNG 359 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR Sbjct: 360 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 403 >UniRef50_C4U020 Flagellar hook protein FlgE n=2 Tax=Yersinia RepID=C4U020_YERKR Length = 437 Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust. Identities = 264/437 (60%), Positives = 317/437 (72%), Gaps = 35/437 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQAVSGLNAA++NLDVIGNNIANSAT GFK+G+ SFADMFAGS+ G+GVKVAGITQD Sbjct: 1 MGFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F DGTTT T R LD+AISQNGFFR+ DS G +FY+RNGQFKLDENRN+VNMQGL LTGYP Sbjct: 61 FNDGTTTTTNRRLDLAISQNGFFRMQDSTGGIFYARNGQFKLDENRNIVNMQGLNLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---PLPT------VTP-F 170 ATGTPPT+QQGANP +SIP ++ AK TT+ +M NL S+ P T TP F Sbjct: 121 ATGTPPTVQQGANPVPLSIPQGMIPAKATTSGNMVANLTSTHNIIPAETTSSAGVTTPTF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-----NNWQVYTQDSSD-PNSIAKT 224 D+Y+ ++T FDS GN H+++V++VK + N+W VYT+DSS P +A+ Sbjct: 181 DPDKPDTYSFVNNITTFDSLGNRHEINVFYVKRSEDAVNGNSWDVYTRDSSAVPAQVAER 240 Query: 225 ATTLEFNANGTLVD-------------------GAMANNIATGAINGAEPATFSLSFLNS 265 ++ F+ NG LV+ I G +NGA F+L+ S Sbjct: 241 RGSMRFDTNGALVETTNPVITPPATTPVETPTTVPFTLTIPMGIVNGAPAQDFALNVAGS 300 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 QQNTG ++IV Q GY G+ +QIN+DG+VVG YSN+QTQLLGQIV+ NFAN EGL Sbjct: 301 KQQNTGTDSIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQLLGQIVMVNFANPEGL 360 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +SEG+NVW T SSG A+LGTAG+G FGTLT+GALE+SNVDLSKELVNMIVAQRNYQSNA Sbjct: 361 SSEGNNVWKETLSSGNAILGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNA 420 Query: 386 QTIKTQDQILNTLVNLR 402 QTIKTQDQIL TLVNLR Sbjct: 421 QTIKTQDQILQTLVNLR 437 >UniRef50_A4TKA1 Flagellar hook protein FlgE n=34 Tax=Enterobacteriaceae RepID=A4TKA1_YERPP Length = 428 Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/428 (60%), Positives = 317/428 (74%), Gaps = 26/428 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQAVSG+NAA++NLDVIGNNIANSAT GFK+G+ SFADMFAGS+ G+GVKVAGITQD Sbjct: 1 MGFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F DGT T T R LD+AISQNGFFR+ DS+G ++Y+RNGQFKLDENRN+VNMQGL LTGYP Sbjct: 61 FNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADSY 178 ATGTPPT+QQGANP +SIP +++AK TT+ +M NL S+ + +PF N D+Y Sbjct: 121 ATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSPFDPDNPDTY 180 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKTGD-----NNWQVYTQDSSDP---------NSIAKT 224 + ++T FDS GN H+++V++VK + N W VYT+DSS + A Sbjct: 181 SFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK 240 Query: 225 ATTLEFNANGTLVDGAMANN----------IATGAINGAEPATFSLSFLNSMQQNTGANN 274 ++ F++NG L + N I G +NGA +F+L+ S QQNTGA++ Sbjct: 241 RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADS 300 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 IVA Q GY G+ +QIN DG+VVG YSN+QTQLLGQIV+ NF+N EGL+SEGDNVW Sbjct: 301 IVAQNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWK 360 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 TQSSG LGTAG+G FGTLT+GALE+SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI Sbjct: 361 ETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 420 Query: 395 LNTLVNLR 402 L TLV+LR Sbjct: 421 LQTLVSLR 428 >UniRef50_D0FQ44 Flagellar hook protein FlgE n=2 Tax=Erwinia pyrifoliae RepID=D0FQ44_ERWPY Length = 410 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 196/411 (47%), Positives = 266/411 (64%), Gaps = 10/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+FSQ +SGLNAAA+ LDV+GNNIANS T+GFK+G+ FAD+FAG++ G+GV+VAG +Q+ Sbjct: 1 MSFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFAGAQ-GMGVQVAGSSQN 59 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM-QGLQLTGY 119 F DG T TGR +D+ I+ NGFFRL+D G +YSRNGQF D N + N+ GL+LTGY Sbjct: 60 FKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLRLTGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 ATGTPP IQ GA I I T M +T+ + NL +S + T TPF ++ +++N Sbjct: 120 QATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGKLNGNLTASAEVVTKTPFDHTDGETFN 179 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS------DPNSIAKTATTLEFNAN 233 + FDS GN H + +Y+VKT W+ Y D+S P T ++F+ N Sbjct: 180 SSSQIEAFDSLGNRHTIDIYYVKTATGEWKAYANDASAPVTSGTPPKSEYTELDIKFDEN 239 Query: 234 GTLVDGAMAN--NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 G L + A ++ N+ + +NGA P L Q + A+ +G+ G+ V++ Sbjct: 240 GKLTNDAASSILNVKSAGLNGATPLDLQLDLSGITQHESDASTFEPVKTDGHAAGNYVNF 299 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 QI D+G + NY N + QL+ Q+VLANFAN GL G+N W + SG +++GTAGTG+ Sbjct: 300 QIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVESPQSGGSIIGTAGTGS 359 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+LT GALE SNVDL E+VNMIV QRNYQSN+QTIKTQ ++L TLVNLR Sbjct: 360 FGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQTLVNLR 410 >UniRef50_C4SBL3 Flagellar basal body FlaE domain protein n=2 Tax=Yersinia RepID=C4SBL3_YERMO Length = 407 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 197/407 (48%), Positives = 262/407 (64%), Gaps = 7/407 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQ +SGLNAA+ LDV+GNNIANS T GFKSG+ +FAD+FAGS+VG+GV+V+ + Q+ Sbjct: 1 MGFSQGLSGLNAASQALDVVGNNIANSQTVGFKSGSIAFADVFAGSQVGMGVQVSSVNQN 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F+DG + LD+ I NGFFRL + G VFYSRNGQFK DEN ++N QG+ LTGY Sbjct: 61 FSDGVLGSGASSLDMGIQGNGFFRLTNEAGRVFYSRNGQFKQDENGFIINNQGMFLTGYQ 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSASNADSYN 179 A+GTPP IQ GA I IP+ M A+ + S+ NL+S ++ + F ++ SY+ Sbjct: 121 ASGTPPAIQPGAAVGPIQIPSGQMPARASDGGSLSGNLDSGTEVVDPAIKFDPADNKSYS 180 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN-----SIAKTATTLEFNANG 234 V +DS GN H ++VY+VKT DN W+ Y+ D++ P L+F+ +G Sbjct: 181 SVSQVDGYDSLGNRHTINVYYVKTSDNEWKAYSSDTTSPKLDNNGDPVYQELELKFDTSG 240 Query: 235 TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 L ++ + A NG EP F L ++ M Q + + T GY PG + Y + Sbjct: 241 QLTTKPAKLSVQSAAYNGGEPLDFELD-MDGMTQQASDTAMASPTTTGYAPGQMNGYTVG 299 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 D+G ++ +YSN Q QLLGQ+VL+NF N GL+S+GDN WS T +SG + G AGTGN G Sbjct: 300 DNGQIIASYSNGQQQLLGQVVLSNFTNPGGLSSQGDNCWSETPASGQPVDGIAGTGNLGN 359 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L LEASNVDLSKE+VNMIV QRNYQSN+QTIKTQ ++L L NL Sbjct: 360 LFGNRLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQILANL 406 >UniRef50_B2AI79 FlgE: Flagellar hook protein n=6 Tax=Betaproteobacteria RepID=B2AI79_CUPTR Length = 414 Score = 339 bits (870), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 199/421 (47%), Positives = 261/421 (61%), Gaps = 27/421 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q VSGLNAAA+NLDVIGNNIAN+ T G+K A FAD++AG+K+GLGV+V + Q Sbjct: 1 MGFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYAGTKIGLGVRVNSVVQS 60 Query: 61 FTDGTTTNTGRGLDVAISQ-NGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F G +GR LDVAI+ NGFFRL G+V+YSRNGQF+ E+ + NMQGLQ+TGY Sbjct: 61 FNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQVTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS-----N 174 PA G P + I N M + T++ + + L+S +PT F++S Sbjct: 121 PAGVAGGA---GVQPQPLVISNAQMEPRATSSITAKFQLDSRATVPT-QAFASSAGSPPT 176 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN-------------NWQVYTQDSSDPNSI 221 ++ +N ++ V+DS GN + YF K D+ +WQ+Y D + N++ Sbjct: 177 SNMFNYSTAINVYDSLGNKQQLMAYFAKVADSAVAPVHPTVAGGTDWQMYVTDVNG-NAV 235 Query: 222 AKTATTLEFNANGTLVD-GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 TL F+ G L A A + A+NGA+ L L+ Q N++ +Q Sbjct: 236 GGAPVTLAFDNAGALQSPAAGAVTLTQPAVNGAQAMAMKLD-LSGTTQFGADNDVKQLSQ 294 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 NGY G L+ + +N DGT+ GNYSNEQT+ LGQIV+A F N EGL EGDNVWSAT SSG Sbjct: 295 NGYTSGSLLGFSVNGDGTITGNYSNEQTKPLGQIVMAAFGNVEGLKPEGDNVWSATGSSG 354 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 LLG AG G+ GTL + A+EASNVDLS +LVN+IVAQRNYQ+NAQTIK QD ++ TLVN Sbjct: 355 QPLLGVAG-GSLGTLRSNAVEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 413 Query: 401 L 401 L Sbjct: 414 L 414 >UniRef50_Q8D3G0 FlgE protein n=2 Tax=Enterobacteriaceae RepID=Q8D3G0_WIGBR Length = 410 Score = 330 bits (845), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 177/411 (43%), Positives = 251/411 (61%), Gaps = 10/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F Q ++G+N+AA LDVIGNNIANS T GFKS SF+D+F+GS VGLG +++ +TQ+ Sbjct: 1 MSFIQGINGINSAAQALDVIGNNIANSQTIGFKSSYVSFSDIFSGSMVGLGSQLSNVTQN 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F G+ + LD+AIS NGFFRL DS G ++++RNG+FKL+ +R +VN+Q LTGY Sbjct: 61 FASGSMVTGSKNLDMAISGNGFFRLSDSGGKIYFTRNGEFKLNSHRQIVNLQNKFLTGYQ 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 A G PP+I G++ NI IP+T M +T + NL S +P + F+ N SYN Sbjct: 121 ARGNPPSIDSGSSIENIIIPSTSMNPVVSTEGEIHGNLKSDVDVPKNSIFNIKNPKSYNF 180 Query: 181 KGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDP-----NSIAKTATTLEFNANG 234 + +DS G H + ++FVK NW V+ D + P +I + F+ NG Sbjct: 181 TTQLEAYDSLGKKHVIKIFFVKQEAQGNWMVHGYDETSPIVDDSKNIKTNPILISFDENG 240 Query: 235 TLVDGAMANN---IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 L +N I +++G++P ++ L M Q + N I NG+ G Y Sbjct: 241 NLKKSENSNKYISIDGSSLDGSDPLKVEIN-LEEMTQYSSDNQINYQKINGHGVGKFNDY 299 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 ++D G ++ NYSN QTQL+ QI +ANF NN GL G+N W + SG A++G + TG+ Sbjct: 300 NVSDSGKIIANYSNGQTQLIAQIAMANFTNNLGLTPNGENCWLESAESGPAIIGLSETGS 359 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG ++ LE+SNVD+S ELV M+ Q NYQSNAQTIKTQDQ+L LVN++ Sbjct: 360 FGRISGQKLESSNVDISNELVKMMTQQSNYQSNAQTIKTQDQLLQILVNMK 410 >UniRef50_A9IKQ4 FlgE protein n=2 Tax=Bordetella RepID=A9IKQ4_BORPD Length = 413 Score = 323 bits (828), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 196/421 (46%), Positives = 261/421 (61%), Gaps = 27/421 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q +SGLNAAA NLDVIGNNIANS T GFKS TASFAD++A S+VGLGVKV+ I Q Sbjct: 1 MGFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASSRVGLGVKVSAINQR 60 Query: 61 FTDGTTTNTGRGLDVAIS-QNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G T TG D+AI GFFRL D +G VFYSRNG+F +D++ LVN QG +LTGY Sbjct: 61 FSVGNVTVTGGEYDIAIDGPKGFFRLTDPSGGVFYSRNGEFLVDKDFYLVNAQGYRLTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPL-PTVTPFSASNADS 177 A G+ P ++ +P +A K T A +Q NLN+ +D + P +PF + A + Sbjct: 121 AAGAV------GSAPVDLRLPQGNIAPKPTDAAGLQTNLNANADAIDPATSPFDPTLAST 174 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVYTQ---DSSDPNSIAKT---- 224 Y TV+DS GNAH ++ YFVK T ++ ++VY ++ DP + A Sbjct: 175 YTDSVPTTVYDSLGNAHQLTQYFVKRAGDTVTNESVYEVYYTLDGEAMDPTTEAAGVWGG 234 Query: 225 ATTLEFNANGTLVDGAMAN-NIAT--GAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 ATTL F+A G L + + AT G + A+P ++S+ Q G++ TQN Sbjct: 235 ATTLTFDAAGRLTSAPTVDLSFATPGGTTSPADPLAITMSYDGVTQY--GSDFSPKITQN 292 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 GY G+ IN DGT+ NY+N +T ++G + LANF N +GL G+N W+ T +SG Sbjct: 293 GYSSGEYSGLSINSDGTLQANYTNGETAIIGTLALANFNNVQGLQPVGNNAWAETGASGQ 352 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LG GT T+ A+EASNVD+SKELVNMIVAQR YQ+NAQTIKTQD+++ L+N+ Sbjct: 353 PTLGQPGTNGLATVVGQAVEASNVDMSKELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 412 Query: 402 R 402 R Sbjct: 413 R 413 >UniRef50_A1K948 FlgE protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K948_AZOSB Length = 445 Score = 290 bits (741), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 188/446 (42%), Positives = 262/446 (58%), Gaps = 45/446 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 MAF Q +SGLN+++ LDVI NN+AN++T GFK+ FADM+A + +VG+G Sbjct: 1 MAFQQGLSGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGS 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 KVA +TQ FT G T T LD+AI+ NGFFRL S+GS+ YSRNGQF +D N N+VN Sbjct: 61 KVAAVTQSFTQGNLTATNNPLDMAINGNGFFRLSRSDGSIAYSRNGQFDVDRNGNIVNAT 120 Query: 113 GLQLTGYPATGTP--PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT---- 166 G +LTG+ A T T+ G P+ I I T +A + T TAS+ +NL+SS+ P Sbjct: 121 GEKLTGFQALDTSGTQTVFSG-EPSVIYIDTTNIAPRETGTASVGVNLDSSEKNPLNKNP 179 Query: 167 -------VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD------NNWQVYTQ 213 ++A +SYN S+TV+DS GNA M++YFV+ D N W VY + Sbjct: 180 VGSDINNFLNYTAIPVESYNYTTSMTVYDSLGNASLMNLYFVRDPDVAGVSPNTWTVYGR 239 Query: 214 -------DSSDP----NSIAKTATTLEFN----ANGTLVDGAMANNIATGAI--NGAEPA 256 D +DP + + T+ F + T+ + N TGA GA+ Sbjct: 240 LSNDVVPDPADPALSTGAPLENLGTITFTNLGVPDSTIAGNGVFNVTRTGAQLGTGADDL 299 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 F+L S Q NT + + Q+GY G L +++ G V G +SN Q + + ++ L Sbjct: 300 NFTLDLSRSTQWNTDSGVTTSPRQDGYTTGRLTGLSVSNTGVVQGTFSNGQVRDIARLAL 359 Query: 317 ANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 ANF++ +GL S GDN+W+ + SG +G GTG G++T G +E SNVDL++ELV+MIV Sbjct: 360 ANFSSPQGLTSLGDNLWAESFESGQPTVGAPGTGVLGSVTAGQIEESNVDLTQELVSMIV 419 Query: 377 AQRNYQSNAQTIKTQDQILNTLVNLR 402 QRNYQ+NAQ+I+TQDQIL TLVNLR Sbjct: 420 QQRNYQANAQSIRTQDQILQTLVNLR 445 >UniRef50_B2UJX1 Flagellar basal body FlaE domain protein n=3 Tax=Ralstonia pickettii RepID=B2UJX1_RALPJ Length = 402 Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 188/413 (45%), Positives = 255/413 (61%), Gaps = 23/413 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGL+AA+ NLDVIG+N+AN+ T G+K TA F D++A S +VG GV+ Sbjct: 1 MGFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQVGQGVE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNMQ 112 V ++Q FT G T TG LD+AI+ GF+R+VD+ +G V YSRNGQF+ D+N +++ Sbjct: 61 VTRVSQSFTQGNVTITGNPLDIAINGTGFYRMVDTASGQVSYSRNGQFQTDKNGYIISAT 120 Query: 113 GLQLTGY--PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G LTGY +TG T A TN+ IP +A TT + INL+++ PT TPF Sbjct: 121 GQNLTGYGVDSTGKVNT----AVLTNLQIPVNDLAPLATTNTAFGINLDAAATAPTTTPF 176 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ-DSSDPNSIAKTATTLE 229 S +N+ ++N S V+D G AH ++ Y+V+T W VY+Q D ++P TTL Sbjct: 177 SPTNSATFNHSVSEQVYDGTGTAHMLTNYYVRTA-TGWDVYSQVDGNNPTG-GNPVTTLT 234 Query: 230 FNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV-ATTQNGYKPGDL 288 FN+NG L + + IA ++ A + S+ F + Q G N+ TQ+GY G L Sbjct: 235 FNSNGQLT--STPSKIA---VSFAGMSIASMDFTGTTQYGGGYNDTAPGVTQDGYATGRL 289 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 SY + DGT+ YSN +T LGQI +ANF EGL + G N W T +SG LGT G Sbjct: 290 ASYSVGTDGTITARYSNGRTATLGQIAMANFKAPEGLQNIGGNQWVETSNSGAPNLGTPG 349 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G+FG L + A+E SNVDLS+ELVNMI+AQR+YQ+NAQTIKTQD IL TLV + Sbjct: 350 MGSFGLLQSSAVEQSNVDLSQELVNMIIAQRSYQANAQTIKTQDTILQTLVTM 402 >UniRef50_A2SKD4 Flagellar basal body and hook protein n=3 Tax=Betaproteobacteria RepID=A2SKD4_METPP Length = 420 Score = 280 bits (717), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 174/423 (41%), Positives = 248/423 (58%), Gaps = 24/423 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLNAA+ NL++IGNN+AN++T+G KS A F D++A + VG+GV Sbjct: 1 MSFQQGLSGLNAASKNLEIIGNNVANASTFGAKSSRAEFGDVYANALNGSGTNMVGIGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q FT G T T +D+AI+ +GFF++ D Y+RNGQFK+D +VN G Sbjct: 61 LATVAQQFTQGNITTTDNPMDLAINGSGFFQVSDGKNPTMYARNGQFKIDREGFIVNNSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFS 171 +L GYPA G + A I +P +A + T ++++NL++ + P Sbjct: 121 YKLLGYPADGQGVIVPGQAQA--IQLPTAGIAPRATDRIAIEMNLDARQAVTTPATGGID 178 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI-----AKTAT 226 + +YN SVTV+D++G ++ YF K+G + W VY + P S+ A +T Sbjct: 179 FDDPATYNNATSVTVYDAKGQDVALTYYFQKSGADQWDVYVTANGTPISVDGTGAALPST 238 Query: 227 TLEFNANG---TLVDGAMANNIA--TGAINGAE-PAT-FSLSFLNSMQQNTGANNIVATT 279 T+ F ANG T GA+ NI T A G P T L ++ Q +G + + Sbjct: 239 TMTFPANGSAPTAPVGAVPINIPATTNAAGGTTLPITGIELDVTSATQYGSGFG-VTDMS 297 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q GY PG L I +G ++ YSN Q++ GQ+ LANF N +GL G+NVW+ T +S Sbjct: 298 QTGYAPGQLSGISIEANGVIMARYSNGQSKPGGQLELANFRNPQGLQPLGNNVWATTFTS 357 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G ++G AG GNFG L +GALE SN+DL+ ELVNMI AQR YQ+NAQT+KTQD ++ TLV Sbjct: 358 GDPVVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQRVYQANAQTVKTQDSMMQTLV 417 Query: 400 NLR 402 NLR Sbjct: 418 NLR 420 >UniRef50_Q47I23 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I23_DECAR Length = 442 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 182/448 (40%), Positives = 249/448 (55%), Gaps = 52/448 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAF Q +SGLN ++ LDV NNIAN++T GFKS + FAD++A S +VG+GV Sbjct: 1 MAFQQGLSGLNTSSKALDVTSNNIANASTVGFKSASTHFADVYAASLAGGGASQVGIGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + I Q FT G T T LD+A++ NGFFR+ +G+V Y+RNGQF LD +VN Sbjct: 61 ASAIAQQFTQGNITTTSNSLDIALNGNGFFRMTQ-DGAVRYTRNGQFHLDSTGYIVNDNK 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTAS----MQINLNSSDPLP---- 165 LTGY A + + P+ I + ++ + T S +NLNS+D +P Sbjct: 120 ENLTGYAADAQGKIV--ASTPSGIKVDTAPISPQATGATSDGVRFSLNLNSTDKVPGTAW 177 Query: 166 -TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK------------TGDNNWQVYT 212 + T + + +YN +VTV+D+ GNAH M++YFVK T W V+ Sbjct: 178 TSPTGTNVPDTSTYNYSNAVTVYDTLGNAHTMTMYFVKSAPTAAEVLANPTTTGAWDVHY 237 Query: 213 Q------------------DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE 254 Q DS+ T TL N NG + + N+ T + Sbjct: 238 QVDGTSEANVGGSPLRMTFDSTGAYLAPTTPATLAVNLNGVATNLSTPANVVTNS--ATS 295 Query: 255 PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 P +F+++F S Q + I + TQ+GY G L S I D+G + G YSN QT+ + QI Sbjct: 296 PLSFAMNFAGSTQYGSDFA-IASKTQDGYASGQLSSLTIGDNGVIQGVYSNGQTRNMAQI 354 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 VLANF N GL S G+N + T SG +++GT TG FG L +GA+E SNVDL+ ELVNM Sbjct: 355 VLANFQNPNGLMSIGNNDYIETADSGQSMIGTPNTGTFGVLQSGAVEDSNVDLTAELVNM 414 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNLR 402 IV QRNYQ+NAQ+IKTQDQI+ TLVN+R Sbjct: 415 IVQQRNYQANAQSIKTQDQIMQTLVNIR 442 >UniRef50_Q1QW31 Flagellar basal body FlaE n=2 Tax=Gammaproteobacteria RepID=Q1QW31_CHRSD Length = 387 Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 170/404 (42%), Positives = 237/404 (58%), Gaps = 19/404 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQ++SG+NAA++ LD IGNNIANS T GFKS + FAD+FA S+ GLG +VAG QD Sbjct: 1 MGFSQSLSGVNAASSQLDTIGNNIANSQTVGFKSSSVQFADIFANSQ-GLGTRVAGKLQD 59 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F G+ TGRGLD+AI+ +GFF+ N + YSRNGQ + + N QG +LT Sbjct: 60 FGTGSLETTGRGLDLAIAGDGFFQFT-QNEQLAYSRNGQLSMSADGYFENAQGARLT--D 116 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 G P + Q + A+ TT NLN+ F+ +D+Y+ Sbjct: 117 QQGEPLQVTQFS-----------QGAQATTGVETAFNLNAETEALAPNNFNQDQSDTYSY 165 Query: 181 -KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTL-VD 238 + TV+DS G AHDMS+Y+ KTG+N+W+V + + A ++ FN +G VD Sbjct: 166 VTNAGTVYDSLGVAHDMSLYYTKTGENDWEVRAALDGEM-ADGGAAQSISFNESGVPDVD 224 Query: 239 GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 A++ N A+ + + Q A + Q+G G V +I ++G Sbjct: 225 TALSFNFGDLGNGSADFDNIEVDLAGTTQYGE-AFELREFAQDGNASGTFVGVEITENGE 283 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 V+ NYSN ++ +G + +ANF N EGL +GDN+W+ATQ SG ALLG AGTG G+L +G Sbjct: 284 VLANYSNGNSEAVGTVGMANFRNPEGLEPQGDNLWAATQESGAALLGQAGTGQLGSLESG 343 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LEASNVDL++ELV+MI+AQRN+Q+N I+TQ IL T+ NLR Sbjct: 344 TLEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVTNLR 387 >UniRef50_C6WVA7 Flagellar basal body FlaE domain protein n=3 Tax=Betaproteobacteria RepID=C6WVA7_METML Length = 421 Score = 271 bits (692), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 180/425 (42%), Positives = 244/425 (57%), Gaps = 27/425 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVK------- 53 M+F Q +SGLNAA+ L+VIGNN++N+ T GFK A FAD+FA S G G Sbjct: 1 MSFQQGLSGLNAASKQLEVIGNNVSNANTVGFKQSRAEFADVFANSITGGGGSQIGIGTN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q FT G T T LD+AI+ NGFFR+ S G+V Y+RNGQF+LD+ +V+ Sbjct: 61 LATVAQQFTQGNITATNNSLDIAINGNGFFRM-SSGGAVTYTRNGQFQLDKQGFIVDSAS 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD-PLPTVTPFSA 172 +LTGY A + A ++ I + TT INL+S + P+P FS+ Sbjct: 120 KRLTGYAADANGNILSGAA--VDLQINTADIQPVATTKIEGTINLDSRNNPMPAAPVFSS 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT-LEFN 231 ++ +YN +VTV+DS GN+H + +F KT N W +YT P + AT + F Sbjct: 178 TDPTTYNNSTAVTVYDSLGNSHTLQNFFRKTAANVWDIYTTVDGAPIPASGAATAQMTFT 237 Query: 232 ANG---TLVDGAMANNIA-----------TGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 G T+ A A I T NGA T ++ + S Q + A +I A Sbjct: 238 GTGVSPTITPTAPATGIPSVTFTPMNTATTPVANGAANVTTTIDYSKSTQFGS-AFSINA 296 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 +Q+G+ G L + DGT+VG YSN Q++ LG++VL++F N GL S G N W+ + Sbjct: 297 LSQDGFTSGRLSGFNTASDGTIVGRYSNGQSKNLGRVVLSSFTNPNGLQSLGGNAWAVSA 356 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SSG AL G G+G G L + A+E SNVDL+ ELVNMI AQR YQ+NAQTIKTQDQ+L T Sbjct: 357 SSGPALTGAPGSGLLGVLQSSAVEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVLQT 416 Query: 398 LVNLR 402 LVNLR Sbjct: 417 LVNLR 421 >UniRef50_Q8K9K6 Flagellar hook protein flgE n=4 Tax=Buchnera aphidicola RepID=FLGE_BUCAP Length = 409 Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 155/415 (37%), Positives = 242/415 (58%), Gaps = 19/415 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-----FAGSKVGLGVKVA 55 M+ + ++GL +D++ NNIAN++T GFKS T SF D+ ++ + GV ++ Sbjct: 1 MSIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGIS 60 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQ 115 + Q+F+DG T R LD+ I Q+GFFR++DS G V+Y+RNG F LD+N+N+VN QG+ Sbjct: 61 NLVQNFSDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMY 120 Query: 116 LTGYPATGTPPTIQQGAN--PTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 LTG + +N P N+ + L++AK T+ ++ +L + + + Sbjct: 121 LTGQNQFDLKNNLNSISNLEPINLR-KSDLLSAKATSQIKLKADL--INDFSSTNSITGK 177 Query: 174 NADSYNKK-GSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ--DSSDP-NSIAKTATTLE 229 N D N + +T++D N H +++ F + D+ W++ Q D P N I L+ Sbjct: 178 NDDISNSEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILK 237 Query: 230 FNANGTLVDGAMANNIATGAINGA-EPATFSL-SFLNSMQQNTGANNIVATTQNGYKPGD 287 F++ G L+ + + + N +P T +L FL + N + + +QNGY G Sbjct: 238 FDSEGNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPS---IELSQNGYTKGF 294 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 L ++I ++G ++G Y+NE+ Q +GQI LA F N E L E ++WSAT SG +G A Sbjct: 295 LKHFEILNNGEIIGQYTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAA 354 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G FG+L LE+SNVDL+KEL+NMI+AQRNYQS+AQ KT+D+I+NTLVNL+ Sbjct: 355 GDQGFGSLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVNLK 409 >UniRef50_B1K372 Flagellar basal body FlaE domain protein n=54 Tax=Burkholderia RepID=B1K372_BURCC Length = 414 Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 173/425 (40%), Positives = 241/425 (56%), Gaps = 34/425 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M + Q +SGL A++NLDVIGNNIAN+ T GFK G A+FADM+A S ++G+G + Sbjct: 1 MGYQQGLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q+F GT +T LDVAI+ NGFF++ SNG YSR+G F D+N +V+ QG Sbjct: 61 LASVQQNFGQGTINSTKSSLDVAINGNGFFQM-SSNGVTTYSRDGTFHRDKNGAIVDAQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY A G I A + P + +A + T+ + Q NLN+ D +P TPF+A+ Sbjct: 120 RNLMGY-AAGAGGVINT-AQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNAT 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ-DSSDPNSIAKTATTLEFNA 232 + +YN S+ V+D+ G + +++YF K WQ Y P ++ T+ F+A Sbjct: 178 DNTTYNYNSSIQVYDTLGGSQQVTMYFAKNAAGTWQAYAGVQGQTPTNLG----TVTFDA 233 Query: 233 NGTLVDGAMANNIATG---------------AINGAEPATFSLSFLNSMQQNTGANNIVA 277 +G L A ATG GA P +L L Q G + + Sbjct: 234 SGRLSSTTSA---ATGQPTPSLGQFAFSIPNTTGGANPQNLTLD-LGGTTQYGGKDGVNN 289 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 Q+G+ G L ++ I DG + GNYSN Q+ +LG I LANF N GL + G N ++ T Sbjct: 290 LAQDGFASGTLTTFSIGTDGKLTGNYSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETA 349 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 +SGV + G+ N GTL ALE SNV+L+ ELVN+I AQRNYQ+NAQTIKTQ + T Sbjct: 350 ASGVPQISAPGSTNHGTLQGSALENSNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQT 409 Query: 398 LVNLR 402 L+NLR Sbjct: 410 LLNLR 414 >UniRef50_C6MIR8 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIR8_9PROT Length = 423 Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 178/429 (41%), Positives = 236/429 (55%), Gaps = 34/429 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLG 51 M F Q +SGL+AA+TNLDV+GNNIAN T G+K A F D+FA S +VG+G Sbjct: 1 MGFQQGLSGLSAASTNLDVVGNNIANVNTVGYKQSQAQFTDIFANSLDGAGSSRTQVGIG 60 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 +VA + Q F G T LD+AI+ GFFR+ D NG + YSRNGQF+LD N L + Sbjct: 61 ARVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSD-NGVISYSRNGQFRLDGNGFLTDA 119 Query: 112 QGLQLTGYP--ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G+ LTGY A G T Q TN+ + T ++ + T+T ++ NL S+ P VT Sbjct: 120 SGINLTGYAPDANGNINTGQA----TNLKLNTTDISPRVTSTFNLGFNLPSNADAPAVTT 175 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--NNWQVY--TQDSSDPNSIAKTA 225 F A+N S+N+K S FDS GN H + YF K+G N W +Y + DP + Sbjct: 176 FDANNTQSFNEKKSGVFFDSLGNDHAFTYYFQKSGTLANTWDMYASVDGAIDPTGVPMGV 235 Query: 226 T-------TLEFNANGTLVDGAMANNIATG------AINGAEPATFSLSFLNSMQQNTGA 272 T TL F+ NG L N++ + P F+L L + Q Sbjct: 236 TLDGAASVTLTFDDNGILTAPTAPFNVSVDLATINPTLGAGSPLVFALD-LTTATQFGSQ 294 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 I +GY G L + + +G + GNYSN Q + LGQ+VLA+F N +GL GD Sbjct: 295 FGINLAQSDGYASGRLAGFTTSPEGIIQGNYSNGQNKTLGQVVLASFVNPQGLNPIGDGR 354 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 W T SSG L+G +G G L A+E++NVDL+ ELV MI AQR YQ+NA+TI+TQD Sbjct: 355 WIETPSSGQPLVGEPNSGTLGVLQASAVESANVDLTSELVKMITAQRMYQANAKTIETQD 414 Query: 393 QILNTLVNL 401 IL TLVNL Sbjct: 415 AILQTLVNL 423 >UniRef50_A1WFE3 Flagellar basal body FlaE domain protein n=7 Tax=Comamonadaceae RepID=A1WFE3_VEREI Length = 426 Score = 263 bits (672), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 176/434 (40%), Positives = 245/434 (56%), Gaps = 40/434 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M F Q +SGLNAA+ +LDVIG+N+AN+ T GFKSG A FA+M A G G+GV Sbjct: 1 MGFQQGLSGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVD 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 VA ++Q F G+ T TG LDVAI+ GFF L +G+ Y+R+G FKLD++ N++ Sbjct: 61 VAAVSQQFGQGSLTITGNNLDVAINGAGFFTLTLPDGTPAYTRSGNFKLDKDGNMITNDA 120 Query: 114 LQLTGYP---ATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDP-----L 164 ++ GYP ATG ++ GA P + P + + AK T T + NL++ P Sbjct: 121 ARVMGYPVDPATG----LRTGAEPVGMVFPTSAPIPAKQTGTITAAFNLDARAPDAAGNP 176 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQ---DSSDPNS 220 P A+ +Y S+ V+DSQG A +++YF KT N W VY + + P Sbjct: 177 AAQPPVPATPRTTYGT--SINVYDSQGVAKPVNLYFQKTATANTWAVYDRLDDPGATPPV 234 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAI------------NGAEPATFSLSFLNSMQQ 268 A + F+ +G + G A ATG NG T L L+ + Q Sbjct: 235 QAMPIGQITFDNDGKIT-GPAAPAPATGFALPLTIDPTPPNPNGLPAYTVQLK-LDGVTQ 292 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + + +Q+GY G+L I +G ++ YSN T+ GQ+ L+ N +GLA+ Sbjct: 293 FGTRFAVSSLSQDGYTVGELAGIDIESNGMLMTRYSNGVTRSEGQLALSRIRNAQGLAAV 352 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G N W AT +SG A++GTA GNFG L +GALE SNVDL+ ELVNM+ AQR YQ+NAQT+ Sbjct: 353 GSNNWVATHASGPAVVGTASDGNFGALRSGALEDSNVDLTAELVNMMTAQRTYQANAQTV 412 Query: 389 KTQDQILNTLVNLR 402 KTQDQ+++TLVNLR Sbjct: 413 KTQDQVMSTLVNLR 426 >UniRef50_A4G6B1 Flagellar hook protein FlgE n=8 Tax=Betaproteobacteria RepID=A4G6B1_HERAR Length = 418 Score = 260 bits (664), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 159/427 (37%), Positives = 241/427 (56%), Gaps = 34/427 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F Q +SGLNAA+ +L+ IGNN+ANS T GFK FAD++A +++G+G + Sbjct: 1 MSFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGTQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q F+ G T + LD+AI+ +GFFR+ S G++ Y+RNGQF+L + + + G Sbjct: 61 IARVAQLFSQGNITASNNPLDMAINGDGFFRM-SSGGTISYARNGQFELSKEGFIQSASG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTGY A + GA P + I +A + TT +++ L+S + F+ Sbjct: 120 ARLTGYMADANG-VVAIGA-PAELKINKADLAPEATTKYELKLTLDSRKNVLNSANFNPD 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP----------NSIAK 223 + ++N SV V+DS GN+H + ++VKT W V+ + P + Sbjct: 178 DPTTFNDSTSVPVYDSLGNSHILRTFYVKTAGGEWDVFATNDGVPIGYDPAAVPPANAPV 237 Query: 224 TATTLEFNANGTLVDG------AMANNIATGAINGAEPATFSLSFLNSMQ--QNTGANNI 275 T++F G L+ + +++TGA P + + Q Q+ G N Sbjct: 238 ALGTMQFGPGGVLIPSIPPTPLVVPMDVSTGA---TTPFNIVIDHTGTQQFAQSFGVNKQ 294 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + +G+ PG L ++ + DG++VG YSN + +LGQ++L++FAN GL + GDN W Sbjct: 295 LP---DGFPPGTLTAFNVASDGSIVGRYSNGKVNVLGQVILSSFANPNGLQNIGDNQWVE 351 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SGVAL G+ G++ + +E SNVDL+ ELVNMI AQR YQ+NAQTIKTQDQIL Sbjct: 352 TAESGVALTSAPGSSGLGSVQSARIEESNVDLTAELVNMITAQRYYQANAQTIKTQDQIL 411 Query: 396 NTLVNLR 402 TLVNLR Sbjct: 412 QTLVNLR 418 >UniRef50_B9Z359 Flagellar basal body FlaE domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z359_9NEIS Length = 419 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 173/425 (40%), Positives = 237/425 (55%), Gaps = 29/425 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGL AA+ L+V+GNN+AN++T GFK + FADM+ S + G+GV+ Sbjct: 1 MGFQQGLSGLAAASKQLEVVGNNVANASTNGFKRSRSEFADMYGSSLYGVSNAQAGIGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV---FYSRNGQFKLDENRNLVN 110 A ++Q F G +TG LD+AIS GFF L + + YSRNG F++D N LVN Sbjct: 61 TAEVSQLFDQGNINSTGNNLDLAISGKGFFVLKSPSAASSQDAYSRNGAFQVDANGYLVN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS----DPLPT 166 G +L GY A IQ A P ++ +L++ T+ + +NLNSS P PT Sbjct: 121 GDGYKLQGYAAQNG--VIQYTATPVDLQFQTSLISPTATSNVDLGVNLNSSAMVISPTPT 178 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSSDPNSI 221 V P ++ +YN SV V+DS GN HD+S YFVK TG +W V + Sbjct: 179 VNP---TDTSTYNSATSVKVYDSLGNTHDLSFYFVKGTPTATG-TDWTVNLYVDGTAVTS 234 Query: 222 AKTATTLEFNANGTLVDGAMANNI---ATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 TL F+ NG L G + +NI AT P T + L+ Q + + + Sbjct: 235 PAGPQTLSFDTNGVLTSGGVLSNIQYTATTPNGSTTPMTIATVDLSKSTQFNSSFGVNSL 294 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 + +G PG L S IN+ G + YSN +T +GQ+ LANF N +GL S G N+W S Sbjct: 295 SADGNAPGTLTSTNINNQGIIEATYSNGKTVAIGQVALANFTNVQGLQSMGGNLWKDVAS 354 Query: 339 S-GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 S G A +G + + G + + ALE SNVDL+ ELV+MIVAQR YQ+NAQ+IKT+D IL T Sbjct: 355 STGGAKVGAPMSADLGEIQSQALEQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTILQT 414 Query: 398 LVNLR 402 L+NLR Sbjct: 415 LINLR 419 >UniRef50_Q7NU18 Flagellar hook protein flgE n=1 Tax=Chromobacterium violaceum RepID=Q7NU18_CHRVO Length = 416 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 172/422 (40%), Positives = 239/422 (56%), Gaps = 27/422 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-------GVK 53 M F Q +SG+NAA+ LD IGNN+AN+ T GFKS F D++A S G GV Sbjct: 1 MGFQQGLSGINAASVQLDSIGNNVANANTVGFKSSRTEFGDLYAQSIFGTAANSPGNGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V +T + + G T NTGR LD+AI+ NGFF + NG+ YSR+GQF+++ LVN G Sbjct: 61 VLAVTANMSAGNTENTGRSLDLAINNNGFFIMNQPNGTQTYSRDGQFQVNSQGYLVNSYG 120 Query: 114 LQLTGYPATGTPPTIQQGANP-TNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 L GY G + Q P N+ I NT ++ + T+ S + LNS+ +P +P + Sbjct: 121 AYLQGY---GVNTSGQPQVGPLQNLQITNTTISPQATSQISWPVQLNSNATVPVNSPVNP 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYF----VKTGDNNWQVYTQDSSDPNSI-----AK 223 ++ +YN V+DS GN+H +++Y+ N W V P +I Sbjct: 178 TDPTTYNWPSPTVVYDSLGNSHQVTLYYSLASTSATGNTWTVTPYVDGAPATIPGGGSGN 237 Query: 224 TATTLEFNANGTLVDGAMAN-NIATGAINGAE-PATFSLSFLNSMQ--QNTGANNIVATT 279 T +++FN NG+L + AN N+ NG+ P T +++ S Q QN G I T Sbjct: 238 TNFSVKFNNNGSLANTTPANVNLTFNTTNGSSTPQTVAINLTGSNQIAQNYGTGTI---T 294 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 QNG PG L I +G V +SN QT+ LGQ+ LA F N +GL + G N W + +S Sbjct: 295 QNGSAPGLLTGVSIASNGVVQATFSNSQTKTLGQVALATFVNPQGLLNLGGNQWQQSGNS 354 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G A + GTGN GTLT G++E SNV+L+ ELVNMI AQR YQ+NAQTIKTQD ++ TL+ Sbjct: 355 GPATVNQPGTGNAGTLTAGSVEDSNVNLTNELVNMITAQRYYQANAQTIKTQDTLIQTLL 414 Query: 400 NL 401 N+ Sbjct: 415 NI 416 >UniRef50_C5SD65 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD65_CHRVI Length = 436 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 168/437 (38%), Positives = 238/437 (54%), Gaps = 36/437 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M+FS +SGL AAA +L+V GNN+ANS T GFK A FAD++A S K +GV++ Sbjct: 1 MSFSIGLSGLQAAAKDLEVTGNNVANSGTIGFKKSRAEFADIYASSFYTCVNKSAVGVRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQ 112 +TQ F+ G T LD+AI+ GFF L G Y+RNG F++D + +VN Sbjct: 61 DAVTQQFSQGNVELTDNTLDLAINGEGFFVLNSEAGQDGKVYTRNGAFQVDRDGYVVNSS 120 Query: 113 GLQLTGYPATGTPPTIQQGANP---TNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT- 168 G +L YP T TP + + +I +P MA K TT +Q+NLNS + + T T Sbjct: 121 GQRLQAYPPT-TPNSAVSAFDTGKLEDIQLPLDNMAPKATTEVELQVNLNSDETVITGTT 179 Query: 169 -----------PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT--QDS 215 P + + SYN + V+DS G D+++YFVKT +NW V+ +DS Sbjct: 180 PPGPAFAFPTAPATDVDPTSYNWSTTYQVYDSLGKPRDVTMYFVKTAPDNWAVHVGMRDS 239 Query: 216 SDP-NSIAKTATTLEFNANGTLVDGAMANN---IATGAI------NGAEPATFSLSFLNS 265 + + T F A G N ++ G NGA FS+ NS Sbjct: 240 AGVMQDVGGGTNTAIFTAAGVFDTATSTPNPIAVSVGPFLTPPDDNGAGALAFSIDMSNS 299 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 Q + NN+ TQ+GY G L + ++ DG + YSN ++ +LGQ+ +ANF N +GL Sbjct: 300 TQYHNSRNNLNDVTQDGYTSGTLSGFDVDADGAIFSRYSNGKSYVLGQVAMANFKNPQGL 359 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 GDN W + +SG + AG G G++ + ALE SNVDLS+ELVNMI AQRNY++NA Sbjct: 360 QQLGDNNWGESYNSGEPIYAAAGDGRLGSIQSCALENSNVDLSQELVNMITAQRNYEANA 419 Query: 386 QTIKTQDQILNTLVNLR 402 +TI T DQ+ T++N+R Sbjct: 420 KTISTSDQMTQTILNIR 436 >UniRef50_C6NYI1 Flagellar hook protein flgE n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYI1_9GAMM Length = 416 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 168/423 (39%), Positives = 249/423 (58%), Gaps = 29/423 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------SKVGLG 51 M ++ A+SGL+AA T+L+ IGNNIAN T GFK A F D++A + G+G Sbjct: 1 MGYNTAISGLDAAQTDLNTIGNNIANVNTVGFKESNAQFGDLYAASLAGSAGASTTPGIG 60 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 V ++Q+FT G TG LD+AI+ GFF +V++NG++ Y+RNGQF + N L N Sbjct: 61 VSTVDLSQNFTQGNIQTTGNPLDMAINGPGFF-IVNNNGTMDYTRNGQFHVSSNGVLENN 119 Query: 112 QGLQLTGY-PATGTP---PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 L + G+ P G+ TI +N++I + M + T+ A++ NLN++D P+V Sbjct: 120 GDLPVQGFQPVPGSNGRFSTIL-----SNLTISESAMPPQATSQAALVANLNANDVPPSV 174 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK---TGD----NNWQVYTQ--DSSDP 218 TPFSASN +SYN + V+DS GNA D+++YFV+ TG N W VY +SS Sbjct: 175 TPFSASNPNSYNDSTTFQVYDSLGNAQDITLYFVQASGTGSANQPNQWDVYYSAGNSSGT 234 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 + TTL+F+ G LV G A+ +G +G+ +T S++ S N+ + + Sbjct: 235 TVATGSLTTLQFSNTGQLVSGGTASFTVSGWGDGSASSTISVNLSGSTLTNS-PFAVTSE 293 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 NGY PG S + G + NY+N Q + +G++ LANFAN +GLA N+WSAT + Sbjct: 294 NVNGYAPGTYSSISVQSTGEIDANYTNGQKKAIGKVALANFANLQGLAPISGNLWSATAT 353 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 +G L+ + GT G + +GA+E+SNV LS +LV+MIVAQ+ YQ+N TIKT+ Q +L Sbjct: 354 AGNPLVNSPGTAGLGVIQSGAVESSNVSLSSQLVDMIVAQQAYQANTSTIKTEQQDTQSL 413 Query: 399 VNL 401 + L Sbjct: 414 LQL 416 >UniRef50_Q0AJ53 Flagellar basal body FlaE domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AJ53_NITEC Length = 419 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 163/426 (38%), Positives = 248/426 (58%), Gaps = 32/426 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M F +SGL AA+ LDV GNNIAN+ T GFK A F+D+FA S ++G+G +V Sbjct: 1 MGFQHGLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFSDVFANSLGGGKNQIGIGTQV 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 A I Q+F G T++ LDVAI+ NGFFR ++NG++ Y+RNGQF LD++ LVN Sbjct: 61 AAIAQEFAQGNVTSSDNPLDVAITGNGFFR-TNNNGTISYTRNGQFHLDKDGFLVNANSY 119 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 +TG+ A + I P N+ +P + + K T + +NL++ + +V F A+N Sbjct: 120 NVTGFAADASGQIIPN--IPVNLRLPTSDLTPKPTANFATGVNLDARTSVTSVA-FDANN 176 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ-----DSSDPNSIAKT----- 224 +Y S +FDS GN+H ++++F KT W V+ D+++ + T Sbjct: 177 PLTYAHSTSGEIFDSLGNSHILNLFFQKTNSTEWGVFATVDGAVDTTNGLPLGVTFGGGG 236 Query: 225 ATTLEFNANGTLVD--GAMANNIATGAIN----GAEP-ATFSLSFLNSMQ--QNTGANNI 275 +T+L F++NG + G + + AI+ GA P TFS S Q G N + Sbjct: 237 STSLTFDSNGIMTTPTGPIDVTVDFQAIDATKWGAIPDLTFSFDLTRSTQFGNKFGVNMM 296 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 Q+G+ G L Y I+D+G + G+Y+N T+ LGQ+ LA F+N GL G+N W+ Sbjct: 297 ---NQDGFTSGRLAGYSISDNGEIRGSYTNGVTRTLGQLALAGFSNPNGLKPMGNNQWAE 353 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG+ L+GT TG G+L + A+E SNVDL+ ELV++I+ QR YQ+NA+TI+TQD ++ Sbjct: 354 TAESGLPLIGTPETGVLGSLQSSAVEESNVDLTSELVSLIMTQRVYQANAKTIQTQDAVM 413 Query: 396 NTLVNL 401 +++N+ Sbjct: 414 QSIMNI 419 >UniRef50_A4BQF0 Flagellar hook protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQF0_9GAMM Length = 400 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 159/411 (38%), Positives = 240/411 (58%), Gaps = 20/411 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-------GVK 53 M+F A++GLNAA+ +LDV GNN+ANSAT GFKS A FAD++A S VG GV+ Sbjct: 1 MSFETALTGLNAASADLDVTGNNVANSATTGFKSSRAEFADIYALSNVGTAQTSIGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A +TQ FT G TG LD+A++ GFF L ++NG+ YSRNG F+LD + +V+ G Sbjct: 61 LAAVTQQFTQGQFDFTGNTLDLAVNGTGFFAL-NANGTTAYSRNGAFQLDRDGFIVDADG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSA 172 +L GY A G+ I ++I N +A + T + NL++ + +PT F A Sbjct: 120 HRLNGYQA-GSNGAISGALGDLQVNIGN--VAPQATANIGLSANLDARAATIPTA--FDA 174 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 ++ +YN S TV+D+QG H ++YF K DN W +Y D + AK T+ F++ Sbjct: 175 ADPATYNFSTSTTVYDAQGKDHFATLYFQKQSDNVWDIYA--DGDDGTGAKDPATVTFDS 232 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSF-LNSMQQNTGANNIVATTQNGYKPGDLVSY 291 G V A T + N A T ++S +S+ Q ++ +Q+G+ G + Sbjct: 233 RGEFVS---ATGATTYSFNYAGAGTSNISVDYSSLTQYGSVFDVKELSQDGFSTGQFTNL 289 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 + DDG ++ ++N Q+Q LGQI L+ F + + L GD W+ T +SG + G+ Sbjct: 290 GVEDDGRLLARFTNGQSQTLGQIALSRFPSPQSLQQIGDTHWAETFASGAPVTAAPGSSG 349 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GT+ GALE SNV+L+++LV+MI AQRN+Q+N+Q I TQDQI +++N+R Sbjct: 350 VGTIQGGALEKSNVNLTEQLVHMITAQRNFQANSQMISTQDQITQSILNIR 400 >UniRef50_D0I440 Flagellar hook protein FlgE n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I440_VIBHO Length = 401 Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 159/404 (39%), Positives = 231/404 (57%), Gaps = 13/404 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA---GSKVGLGVKVAGI 57 M+ + +SGL A + ++ I +NI+N T G+KS F D++A G GV+V+ + Sbjct: 1 MSINIGLSGLRATSDQINTISHNISNVGTVGYKSSRTEFQDVYAPQFGGGEFGGVEVSNV 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 Q FT G T+TGR D+AI+ GFF +V NG Y+RNG F LD + LV GL+L Sbjct: 61 RQSFTSGAATSTGRNSDLAINGEGFF-MVQQNGQRMYTRNGIFNLDSDGYLVTADGLRLQ 119 Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNA 175 GY + T +IQ GA T++ I MAAK TT S+ +NL++S + P F + Sbjct: 120 GYGVSETG-SIQNGA-LTDLQISTADMAAKVTTKVSLGVNLDASAAVIVPKEKKFDKDDP 177 Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGT 235 ++ S TV+DS G H+++ YFVKT +N W V+ +D + T LEF+ NG Sbjct: 178 STFTCSASTTVYDSLGGEHEITQYFVKTDENTWSVHY--VADGKELDPKNTQLEFDENGK 235 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGAN-NIVATTQNGYKPGDLVSYQIN 294 L+ ++ NG+ AT + S G++ +I + Q+GY PG L + + Sbjct: 236 LIKPEDPISVTLTPKNGS--ATMKIEMDVSEFTQFGSDFSINESKQDGYAPGKLAGWYFD 293 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 DG+V YSN +TQL GQ+VLA F N EGL G W+ + SSG AL G GTG FG Sbjct: 294 ADGSVYARYSNGKTQLQGQLVLARFPNQEGLQQAGGTRWTESFSSGTALFGQPGTGQFGA 353 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 L GA E+SNVDL++E+V+++ AQ NYQ+NA+TI+ +++ L Sbjct: 354 LRVGAYESSNVDLTEEMVSLMSAQSNYQANAKTIQASQEMVQIL 397 >UniRef50_Q48GC0 Flagellar hook protein FlgE n=10 Tax=Pseudomonas RepID=Q48GC0_PSE14 Length = 441 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 169/446 (37%), Positives = 241/446 (54%), Gaps = 51/446 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA +LDV GNNIAN AT GFKS A FAD +A S VG GV Sbjct: 1 MSFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGV 60 Query: 53 KVAGITQDFTDGT-TTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 A ++Q F+ G TT T LD+AI+ NGFF L +NG Y+R G F D+ +VN Sbjct: 61 TTAAVSQQFSQGNLTTGTANSLDLAINGNGFFML-SNNGEKLYTRAGAFHTDKEGYVVNS 119 Query: 112 QGLQLTGY--PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G++L GY A G+ T GA +++ + ++ + K TT + NLNS+ LP++T Sbjct: 120 GGMKLQGYNVDANGSVVT---GA-LSDLRVDSSNLQPKATTAITNVANLNSTTALPSLTT 175 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY--------------TQDS 215 F A++ SYN K S +D+QGNAH + YFVKTG N W +Y T D Sbjct: 176 FDATDTKSYNMKYSTPTYDTQGNAHTLDQYFVKTGTNTWSMYSLMDGRSISDPTTTTADK 235 Query: 216 SD-------------PNSIAKTATTLEFNANGTLVDGAMANNIATG-------AINGAEP 255 +D P ++ + ++FN +GT + +G NGA Sbjct: 236 NDLTFDSSGNLVVAAPGTVPTDSANIKFNTDGTFTVANWVPGVQSGTGTTTSWGANGATG 295 Query: 256 ATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 A+ L+ + + Q + ++ Q+GY G L + ++ G + Y+N ++Q++GQ Sbjct: 296 ASIKLN-MAGITQTASVSGLITQDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTS 354 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 L NFAN +GLA G W T +SGV + GT +G G +T ALE SNVDL+ ELVN+I Sbjct: 355 LTNFANVQGLAQAGGTNWRETFASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLI 414 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNL 401 AQ NYQ+NA+TI TQ I+ T + + Sbjct: 415 KAQSNYQANAKTISTQSTIMQTTIQM 440 >UniRef50_Q0AA87 Flagellar basal body FlaE domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AA87_ALHEH Length = 430 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 157/443 (35%), Positives = 240/443 (54%), Gaps = 54/443 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-------GVK 53 M+F +++GLNAA + L++ G+NIANS+T+GFK FAD+FA S +G+ GV+ Sbjct: 1 MSFGTSLTGLNAAQSELNITGDNIANSSTWGFKESRPEFADLFASSNLGVTGLAIGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + Q F+ G T LD+ IS GFFRL D +G + Y+R+G F+LD + N G Sbjct: 61 LQNVGQQFSQGQFDFTENSLDLGISGKGFFRLSD-DGDISYTRSGAFQLDREGWITNSAG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS------------ 161 +LTG+ A G + G + N +A + TT A +Q NLN+ Sbjct: 120 KRLTGFAADGDGNIVGDGQQELRVETGN--VAPEATTEARIQANLNAGAEIPPAYTLDAD 177 Query: 162 ------DPLPTVTP----------FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD 205 D L V P F + ++N+ S T FDS G H + YF+K D Sbjct: 178 DRLADFDQLEWVGPDENNPVPGAVFDPRDTATFNESTSTTFFDSLGRQHTANFYFIKGND 237 Query: 206 NNWQVYTQ------DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 N+W V+T+ ++ P I+ F NG L++G + T A+ AE F Sbjct: 238 NDWYVHTEVDGEVLNNGQPQPIS-------FGPNG-LIEGNATFDY-TRALADAEDLDFE 288 Query: 260 LSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 L L S+ Q + TQ+G+ G+ S +++DGT+ ++N Q+++LG++ + F Sbjct: 289 LD-LESLTQFGTPFAVSDITQDGFAAGEFSSLDVSEDGTIFARFTNGQSEVLGRVGVTKF 347 Query: 320 ANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQR 379 + E L GD W AT +G ++GTAGT +FG++ +GALE SNVD+S++LV MIVAQR Sbjct: 348 PSQENLQPVGDTEWVATFEAGEPVVGTAGTSDFGSIESGALEQSNVDISEQLVKMIVAQR 407 Query: 380 NYQSNAQTIKTQDQILNTLVNLR 402 N+ +NA+ I T+DQI ++N+R Sbjct: 408 NFSANAKMISTEDQITQEILNIR 430 >UniRef50_B0RT16 Complete genome, strain B100 n=13 Tax=Xanthomonadaceae RepID=B0RT16_XANCB Length = 407 Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 162/418 (38%), Positives = 238/418 (56%), Gaps = 27/418 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-------GVK 53 MAF+ ++SG+NAA +L+V NNIAN T GFK A FADMF + GL GV+ Sbjct: 1 MAFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ + Q F+ G TGR LD+AIS GFF V SNG+ Y+R G F+ D N ++N QG Sbjct: 61 VSNVAQQFSQGNIDPTGRSLDLAISGEGFF-AVSSNGAKMYTRAGNFQTDANGYVINPQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L + + G +++ + T K+T+T ++ L + PTVTPF+ + Sbjct: 120 ARLQVFAPNPSGNGFDVG-RLSDLQLLTTDSPPKSTSTVNLAFTLPGNASAPTVTPFNPA 178 Query: 174 NADSYNKK-GSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQDSSDPNSIAKTATTLEFN 231 + +Y+ G + V+DS G +H + YFVKT + N WQV+ S TTL+F+ Sbjct: 179 DDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDG---SAVGAPTTLQFS 235 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN-------IVATTQNGYK 284 G+L AN I A++ P+T + SMQ N + + T Q+GY Sbjct: 236 DTGSLT--TPANGIV--AMDPFTPSTGAGVL--SMQLNVSGSTQYGEAFALRDTRQDGYA 289 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 G L I+ G V YSN + LGQ+ L +F N +GL S+G+N+W+ + +SG A + Sbjct: 290 SGKLNEISIDTSGVVFARYSNGADKALGQVALNSFVNPQGLQSQGNNMWAESYTSGAARV 349 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G T + G + +G+LEAS VDL+++LVNMIVAQRN+Q+N+Q I TQDQ+ T++N+R Sbjct: 350 GAPDTSDLGQIESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINIR 407 >UniRef50_C4KAU4 Flagellar basal body FlaE domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4KAU4_THASP Length = 450 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 166/460 (36%), Positives = 246/460 (53%), Gaps = 68/460 (14%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGV 52 M+F Q +SGL+ ++ LD+I NN+AN+ T GFK+G+A F+D+FA G +VG+G Sbjct: 1 MSFQQGLSGLSVSSKALDIISNNVANTNTIGFKTGSAIFSDVFAASLTGSISGKQVGVGA 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + + Q FT G T T LD+AI+ +GFF + NG Y+RNGQF+LD+ + Sbjct: 61 TLGAVRQTFTQGNLTTTNNPLDLAINGDGFFVVSRENGPDVYTRNGQFELDKEGFIRTPT 120 Query: 113 GLQLTGYPATGTPPTIQQGANPT------NISIPNTLMAAKTTTTASMQI--NLNSSD-- 162 G +L G+ + TP GA PT ++ +P ++ ++ T+ ++I NL+++D Sbjct: 121 GERLKGFQSPVTP-----GALPTPIGGLKDVQVP--IVGSQPMPTSRVEIGGNLDANDLS 173 Query: 163 ---------------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----- 202 PLP + +A +YN S+ +DS G +H+++ YF K Sbjct: 174 AAQRYPQLFGSTFTFPLPAGE--NWQDARTYNFSTSIKAYDSLGKSHELTYYFAKVTPTP 231 Query: 203 -----TGDNNWQVYTQ-DSSDPNSIAKTAT--------TLEFNANGT----LVDGAMANN 244 T +N W+V+T D P + + +L FN GT +V AN Sbjct: 232 NDPVNTNENTWKVFTSVDGGYPLGVGTDGSIEDPSVIWSLTFNEKGTVNTPIVGPTAANP 291 Query: 245 IATGA--INGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 +A A GA+ F + F + M+Q G+ I TQ+GY G+L + DG V G Sbjct: 292 LAIPASYTPGADRIRFHVDF-SDMRQIGGSYLITELTQDGYTGGELAGVSVGRDGIVTGR 350 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 Y+N +T+ L Q+ L F N L S G+N W AT SG+ AG G G ++ G +E Sbjct: 351 YTNGETRELAQLALQTFRNPNALLSIGNNFWEATTESGLTAPSKAGEGVAGVVSAGMIED 410 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +NV+L+ ELV MIV QRNYQ+NAQ+IK QDQ+L TLVNLR Sbjct: 411 ANVELTNELVQMIVQQRNYQANAQSIKAQDQVLQTLVNLR 450 >UniRef50_A4A615 Flagellar hook protein FlgE n=3 Tax=unclassified Gammaproteobacteria RepID=A4A615_9GAMM Length = 429 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 169/436 (38%), Positives = 243/436 (55%), Gaps = 41/436 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAFS A+SG+NAA +L V+ NNIAN++T GFK+ A FAD++A S +G GV Sbjct: 1 MAFSTAISGINAATADLGVVSNNIANASTTGFKASRAEFADVYATSLLGAGSNAIGKGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +AG+TQ+F G T T LD+AI+ NGFF+L G+V Y+R G F++D LV+ Q Sbjct: 61 LAGVTQEFGQGNITFTNNSLDLAINGNGFFQL-SVEGAVEYTRAGNFQVDREGFLVSNQN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD----------- 162 +L G+ G Q + I I +L+ T+ S+ NL+S + Sbjct: 120 ARLQGFQVDGGGDVTGQLGD---IQIDTSLIDPNPTSNVSLTSNLDSREVTTGTGFATNG 176 Query: 163 PLPT--VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQ---DSS 216 P V P + S AD +N S T+FDS GN H +S+Y+VKT + N ++VY+ S Sbjct: 177 PYDAFAVPPTAPSPAD-FNATTSTTIFDSLGNPHVLSLYYVKTANPNEFEVYSLIDGQSQ 235 Query: 217 DPNS-IAKTATTLEFNANGTLVDGAMANNI---------ATGAINGAEPATFSLSFLNSM 266 DP + TL+F +NG D A I +TGA+NGA TF + + Sbjct: 236 DPGTGTVGDPVTLQFTSNGQF-DPASDTQIDVTAWTPVDSTGAVNGAAAQTFVVDLQQTT 294 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q T A + + Q+G+ G L +I++ G Y+N +++ LGQI LA+F N GL Sbjct: 295 QFGT-AFAVSSVIQDGFAAGQLRGLEIDESGIAFARYTNGESRALGQIALASFNNQNGLQ 353 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 GD W T SSG +G GT G + + ALE SNV++++ELV++IVAQRN+Q+NAQ Sbjct: 354 PVGDTNWVETFSSGSPNVGEPGTSGLGAVQSAALEDSNVEITQELVDLIVAQRNFQANAQ 413 Query: 387 TIKTQDQILNTLVNLR 402 I+ +D I T++NLR Sbjct: 414 VIQAEDAITQTVINLR 429 >UniRef50_D2TJ84 Lateral flagellar hook protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJ84_CITRO Length = 400 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 160/406 (39%), Positives = 227/406 (55%), Gaps = 18/406 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++ A +GLNA LD I NNIAN+ T G+KS T F+ M+A S+ +GV VAG Q Sbjct: 1 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTDFSAMYADSQA-MGVSVAGTAQS 59 Query: 61 FTDG-TTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 G + +TG LD+AI+ GFF + DS G++ Y+R G F+ D+N +VN G L GY Sbjct: 60 IARGGSMVSTGNALDLAINNGGFFVMCDSAGNITYTRAGSFETDKNGYIVNASGACLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 P G+ T+Q G T++ I + A+ T+ + N ++SD + PF SN+DS Sbjct: 120 PVDGSG-TLQTG-TVTDLQIQTGNIPAQATSNMTFTANFDASDETVDRSTMPFDLSNSDS 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-YTQDSSDPNSIAKTATTLEFNAN-GT 235 Y + TV+DS GN H + YF KT DN+W+V Y+ D + + TL F+ N G Sbjct: 178 YTDSYTTTVYDSLGNEHSVCQYFTKTDDNSWEVQYSFDGQMESGVEPV--TLTFDPNTGK 235 Query: 236 LVD--GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT-TQNGYKPGDLVSYQ 292 L ++ TGA A P + + + Q G++ V T + NGY Q Sbjct: 236 LTSPTSPVSVEFETGA---AAPIDMTFDYSSCTQY--GSDFSVTTNSANGYASATQNGVQ 290 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 ++DDG V YSN + L GQIVLA F N GL + W T SG AL+G G+G+ Sbjct: 291 VDDDGKVYATYSNGERMLQGQIVLATFPNENGLEAVSGTAWVQTGESGSALIGVPGSGSC 350 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 GTL++G LE+SNVD++ ELV ++ AQRNYQ+N + I T Q+ + L Sbjct: 351 GTLSSGMLESSNVDITTELVELMTAQRNYQANTKVISTSTQLDDAL 396 >UniRef50_Q5DY15 Lateral flagellar hook protein (FlgE-like) n=39 Tax=Gammaproteobacteria RepID=Q5DY15_ECOLX Length = 400 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 158/410 (38%), Positives = 221/410 (53%), Gaps = 26/410 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++ A +GLNA LD I NNIAN+ T G+KS T F+ M+AGS+ +GV VAG Q Sbjct: 1 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYAGSQA-MGVSVAGTAQS 59 Query: 61 FTDG-TTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 + G + +TG LD+AI+ +GFF DS G++ Y+R G F+ D+N +VN G L GY Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 P + T+Q G T+I I + A+ +++ N ++SD T PF +N+ S Sbjct: 120 PVDDSG-TLQTG-TVTDIQIKTGNIPAQASSSLIFTANFDASDDAIDRTTVPFDPTNSSS 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-YTQDSSDPNSIAKTATTLEFNAN-GT 235 Y + TV+DS GN H + YF KT DN W+V YT D + A TL F+ N G Sbjct: 178 YTDSYTTTVYDSLGNEHSVCQYFTKTSDNTWEVQYTFDGQQQTGVP--AMTLTFDPNTGK 235 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNT-------GANNIVATTQNGYKPGDL 288 L I + A P ++ + Q + AN + TQNG Sbjct: 236 LTSPTTPQTIEF-QTDAAAPIDLTVDYSTCTQYGSEFSVTTNAANGYASATQNGV----- 289 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 Q++DDG V YSN + L GQ+VLA F N GL + W T SG L+G G Sbjct: 290 ---QVDDDGKVYATYSNGERMLQGQVVLATFPNENGLEAVSGTAWVQTGESGTPLIGVPG 346 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 +G GTL++G LE+SNVD++ ELVN++ AQRNYQ+N + I T Q+ + L Sbjct: 347 SGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQLDDAL 396 >UniRef50_A8GYL4 Flagellar basal body FlaE domain protein n=13 Tax=Gammaproteobacteria RepID=A8GYL4_SHEPA Length = 402 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 160/406 (39%), Positives = 237/406 (58%), Gaps = 12/406 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SGL A +L+ I NNIANS+T GF+SG + F+ ++ G + G GV V +Q+ Sbjct: 1 MSFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIYNGGQAG-GVNVMSTSQN 59 Query: 61 FT-DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G+ T TGR LD+ I GFF L +GS Y+R G F D + + + G +L GY Sbjct: 60 FSMGGSLTYTGRQLDMGIQGEGFFVLSGQDGSTSYARAGMFNQDADGYITDPAGNRLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 + G +Q G N T++ + +AA+ T+T + NL++ + P +PF +A + Sbjct: 120 -SIGATGNLQNG-NVTDLQVQTGALAAQATSTIGLTSNLDARVEVIDPATSPFDPDDAST 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-YTQDSSDPNSIAKTATTLEFNANGTL 236 Y+ ++ FDS GN H ++ Y+VKT DN W V Y D +D + TLEF++NG L Sbjct: 178 YHSSSTIAAFDSLGNEHALTQYYVKTADNKWSVHYNMDGTDVTPVG--GHTLEFDSNGML 235 Query: 237 VDG-AMANNIATGAI-NGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 G + NI AI GA +LSF S Q NN + QNGY G+L +I+ Sbjct: 236 TTGNDITLNITDAAIIGGASNMELALSFDKSTQYAADYNN-SSLNQNGYTSGELNGIRID 294 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 D+G + G Y+N Q Q+ GQ+VLA+F+N GL +N W+A+ ++G ++GT TG G Sbjct: 295 DNGMLYGTYTNGQEQIQGQVVLADFSNPNGLVPTSNNAWTASNAAGQPIIGTPTTGTLGG 354 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 L+ G LE SNVD + E+VN++ AQRNYQSNA+ + T + L+N Sbjct: 355 LSAGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400 >UniRef50_A1WUE2 Flagellar basal body FlaE domain protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUE2_HALHL Length = 418 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 143/421 (33%), Positives = 231/421 (54%), Gaps = 22/421 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-------GVK 53 M+F+ +++G+N+A+ +L+ NN+AN+ T GFK A F D+FA +G+ G + Sbjct: 1 MSFNISLTGINSASKDLETTSNNLANAGTTGFKESRAEFNDLFAMGPMGIPQLAVGQGSR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q F+ G+ T R LD+ I GFFR+ D +G V Y+R GQF++D + +VN G Sbjct: 61 LANVGQMFSQGSFDFTERSLDLGIEGRGFFRMED-DGEVSYTRAGQFEVDRDGYIVNNTG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSA 172 +LTG+ I G + + +P + A+ + + NL++ +D + F Sbjct: 120 KRLTGFQTDEDGSRIGDGRD--QLQLPTDGIPARASENVEIAANLSADADVIDEGVAFDP 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ------DSSDPNSIAKTAT 226 + +++ + + T++DSQG+A D + YF K G+N W VYTQ + +D Sbjct: 178 DDNETFTESTTTTLYDSQGSARDATFYFRKVGNNEWDVYTQVDGVDYEQADTEGDYFGPH 237 Query: 227 TLEFNANGTLVDGAMANNIATGAING----AEPATFSLSF-LNSMQQNTGANNIVATTQN 281 L F+ +G+LVD + ++ AE L M Q N+ +Q+ Sbjct: 238 RLSFDTSGSLVDAEGDDEGRIASLEDVPLLAEVDDLDLDIDFGEMTQFARPFNVTNVSQD 297 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 GY G+ + + DGT++ YSN + Q +GQ+ L +F + E L S G+ W AT+ +G Sbjct: 298 GYAAGEFENINVEGDGTILARYSNGEAQAVGQVALTSFPSEEKLQSVGETSWQATRDAGD 357 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L+G G G FG + NGALE SNV++S +LVNMI AQRN+ +NAQ + TQDQ+ ++N+ Sbjct: 358 PLIGVPGQGQFGRVENGALEQSNVEVSDQLVNMITAQRNFSANAQMVSTQDQVTQEILNI 417 Query: 402 R 402 R Sbjct: 418 R 418 >UniRef50_A1T0J3 Flagellar hook protein FlgE n=18 Tax=Gammaproteobacteria RepID=A1T0J3_PSYIN Length = 398 Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 151/402 (37%), Positives = 220/402 (54%), Gaps = 8/402 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SGLNA L+ I NNIAN +TYGFK A FA ++ G + G GV+V+GITQ+ Sbjct: 1 MSFNIAISGLNATNKQLNTISNNIANVSTYGFKESRAEFASIYNGGQAG-GVEVSGITQN 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F +G+ TGR LD+AIS NGFF VD+ G Y+R+G F D++ +V+ G +L GY Sbjct: 60 FDRNGSLEATGRALDLAISGNGFFATVDNKGQQIYTRSGAFSTDKDNFIVSSAGNKLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 +Q+G N +++I ++AK T + N ++ F ++ S+ Sbjct: 120 -TVDAKANLQKG-NIDDLAISTASLSAKATDSIEFTANFDARATPVASAAFDPADPTSFT 177 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + FDS GNAH +S YF+ TG N W + + D + A +EF G L D Sbjct: 178 SSYTAQAFDSLGNAHTVSQYFINTGSNQWNIKVI-ADDNDVTPDPAPVIEFTTEGLLADT 236 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT-QNGYKPGDLVSYQINDDGT 298 + + + GA + S Q GA+ V+T NGY G+L ++ D+G Sbjct: 237 STIPILVSIPALGANLIAVEIDLTGSTQY--GADFGVSTNNPNGYTAGELTGIRVEDNGM 294 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 + ++N Q+QL GQ+VLA+F N L + W T SG + G G+G G LT+ Sbjct: 295 IFAQFTNGQSQLQGQLVLADFPNPTALEQSNNTSWMQTFGSGTPVKGAPGSGVLGKLTSN 354 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 LE SNVDL+ ELV+++ AQRNYQ+N +TI T DQ+ L N Sbjct: 355 MLETSNVDLTSELVSLMTAQRNYQANTKTISTADQLTKALFN 396 >UniRef50_A5V5R7 Flagellar basal body FlaE domain protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5R7_SPHWW Length = 435 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 156/434 (35%), Positives = 235/434 (54%), Gaps = 32/434 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV------GLGVKV 54 M+F A+SGL A+ T+L VI NNIAN T GFK F D+ + S + G G ++ Sbjct: 1 MSFYTALSGLKASQTDLAVISNNIANVGTTGFKRSGTEFGDLVSSSPMQSSGIAGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFF--RLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 GI Q FT G ++ R LD+AIS GFF R +SNG V Y+RNG F +D NR LV+ Sbjct: 61 RGIAQQFTQGGLESSERSLDLAISGQGFFVTRASNSNGQVSYTRNGAFSVDANRFLVDSS 120 Query: 113 GLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP------ 165 G L P G ++ +I +P T +K T T + + S+ +P Sbjct: 121 GAYLQALPTDTKGNVTATGLSSARSIQLPLTSGTSKATQTIDLSVTFPSAGDVPSTRAIY 180 Query: 166 -TVTP--FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-------TGDNNWQVYT--- 212 T P F ++ +SYN+ + TV+D+ GNA M+ Y+++ D NW +T Sbjct: 181 STTNPYKFDRTDPNSYNQSTTTTVYDAAGNAFPMTTYYIRENLPGGSVTDTNWTAHTFIG 240 Query: 213 --QDSSDPNSIAKTAT-TLEFNANGTLVDGAMANNIATGAINGAE-PATFSLSFLNSMQQ 268 + S D ++ + A TL F++ G + A N+ GA P F+L++ S + Sbjct: 241 DTEISYDSSAATQPAPLTLTFDSTGAKTAPSGAINLGPLTPAGASAPLEFTLNYSGSTKM 300 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + + + Q+GY G L + + DG +V +SN +Q LG+I+LANF+N EGL Sbjct: 301 SASPFTLTSFDQDGYAAGQLDNVSVGADGLIVATFSNGDSQALGKIILANFSNPEGLRQL 360 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 GD+ W AT SG ++G A + G + +GALE +NVD+++ELV +I AQRN+ +NA+TI Sbjct: 361 GDSKWGATGLSGEPIIGEASSNGTGQIQSGALEQANVDITEELVALIQAQRNFSANAKTI 420 Query: 389 KTQDQILNTLVNLR 402 + + + T+VNLR Sbjct: 421 EAANTMTQTIVNLR 434 >UniRef50_A6GSX9 Flagellar hook protein E n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX9_9BURK Length = 437 Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 159/442 (35%), Positives = 236/442 (53%), Gaps = 53/442 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSK----VGLGVK 53 +F Q +SGLNAA L+VI NN++N++ GFK A F+D+FA G++ +GLG Sbjct: 8 SFQQGLSGLNAAQRGLEVIANNVSNASVVGFKGSEAEFSDVFARAFNGARSTNGIGLGTS 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A +TQ+F G TG LD+AIS GFF++ NG Y+RNGQF L+ +VN +G Sbjct: 68 LAAVTQNFKQGNINVTGNPLDLAISGTGFFKVQAGNGDNIYTRNGQFTLNNEGVIVNSRG 127 Query: 114 LQLTGYP---ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS----DPLPT 166 +L G+P ATG P + Q +I +P + T +A++++NL++ DP Sbjct: 128 DKLQGFPVDAATGRPSDVAQ-----DILVPRGSIPPAATRSANLELNLDARATAIDP--- 179 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-TQDSSD------PN 219 F +N +++N S+TV+D G AH M++Y K N+W V+ T D + P Sbjct: 180 ALAFDPANLNTFNNSTSMTVYDELGGAHIMAIYMRKEASNDWSVFATVDGTQVDVGTAPV 239 Query: 220 SIA-----KTATTLEFNANGTL---------VDGAMANNIATGAI----NGAEPATFSLS 261 ++ T+ L++ +G L VD M+ + + G P F+ Sbjct: 240 AVTTAPAQSTSANLQYGVDGLLTTPNSGNLTVD--MSRFVTASGVPFSSTGTAPNQFTFD 297 Query: 262 FLNSMQQNTGANNIVATT-QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 N+ Q G++ +V Q+G++ + + DG + +Y+N Q QI L F Sbjct: 298 MSNTTQY--GSSFVVQNLGQDGFESSPFAGFDVGADGMLTISYANGQLVNHAQIGLYRFP 355 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 N EGL G N W AT SSG L+ + FG + +GALE SN+DL+ ELV MI AQR Sbjct: 356 NPEGLQPVGSNGWLATNSSGPELVSLSEDTAFGIIQSGALEESNIDLTAELVAMISAQRV 415 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 YQ+N+QTIKTQD I T+ NLR Sbjct: 416 YQANSQTIKTQDSIFQTITNLR 437 >UniRef50_D0L1M3 Flagellar hook-basal body protein n=5 Tax=Chromatiales RepID=D0L1M3_HALNC Length = 418 Score = 227 bits (578), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 163/424 (38%), Positives = 226/424 (53%), Gaps = 28/424 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F+ +++GLNAA +LDV NNIAN+ + GFKS A F D++A S G GV Sbjct: 1 MSFNTSITGLNAAQKDLDVTSNNIANANSTGFKSSRAQFGDIYAVSAYGNSKTATGQGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFKLDENRNLVN 110 + Q FT G+ T LD+AIS GFF +DS SV YSR G +++ +VN Sbjct: 61 TEAVQQQFTQGSLQFTNNSLDLAISGQGFFTFQPTLDSLQSV-YSRAGALGANKDGFIVN 119 Query: 111 MQGLQLTGYP--ATGT-PPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 G L P A GT T A P I +P A K TT + NL +S +PTV Sbjct: 120 TNGQYLKALPVSANGTLQSTSLASAKP--IQLPVAAGAPKATTLVTQSFNLPASATVPTV 177 Query: 168 TPFSASNAD----SYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQ-DSSDPNSI 221 TPF + A SY + S V+DS GN H ++ Y+VKT + N W VY Q D+ P Sbjct: 178 TPFDTTQATPDPASYTQANSQQVYDSLGNTHTLTSYYVKTANPNEWNVYYQVDTQTP--- 234 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAIN---GAEPATFSLSFLNSMQQNTGANNIVAT 278 + +TL F+ANG L + A + GA P ++ Q N+ A Sbjct: 235 IQGPSTLTFDANGQLPTTPAPFAVTATAASLGTGAAPLNINVQTQGDSTQYNAPFNMAAQ 294 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +Q+G G L + +G + +YSN Q LG + LANF+N +GL G+N W+ + Sbjct: 295 SQDGNTTGQLTGVSVGSNGLIQASYSNGQNIPLGMVALANFSNPQGLKQVGNNSWAESVD 354 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG G GTG FG + GALE SNVDL+++LVN+I AQRN+Q+NAQ I+T +++ Sbjct: 355 SGAPTAGQPGTGTFGLIQGGALEQSNVDLTQQLVNLITAQRNFQANAQAIQTDKTATDSV 414 Query: 399 VNLR 402 +N+R Sbjct: 415 INIR 418 >UniRef50_A0YG82 Flagellar hook protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG82_9GAMM Length = 429 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 151/432 (34%), Positives = 237/432 (54%), Gaps = 33/432 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV------GLGVKV 54 M+F+ A+SGL AA T+L+V GNNIAN++T GFK A F D++A S V G GV V Sbjct: 1 MSFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEFGDVYANSLVSGSNTTGSGVLV 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 I+Q F G + T LD+AI+ GFF + +S+G+ Y+R G F +D+ + N G Sbjct: 61 NSISQQFDQGNISFTDNSLDLAINGTGFFVVAESSGATAYTRAGYFGIDDEGYITNNSGS 120 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L G+ TGT G P ++ + + +A T+ + NL++ P+++PF+ ++ Sbjct: 121 TLQGFLPTGT--GSGVGGTPADLRVQSGDLAPSATSAVDLLFNLDARGDAPSISPFNPND 178 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSI------------ 221 AD++N S+T+FDS+G A S ++ KT +N W ++ S D ++ Sbjct: 179 ADTFNSSTSLTIFDSRGQAQVFSTFYEKTAVENVWNMHAYISDDAGNLQNVISPAGGAGG 238 Query: 222 AKTATTLEFNANGTL---------VDGAMANNIATGAING--AEPATFSLSFLNSMQQNT 270 A L F +G L +D + NG A + F+++ S Q + Sbjct: 239 ANPFFQLTFGTDGLLTGTNPTGLTIDNWNPQGSNQSSTNGSTAIASDFTINIGPSTQFGS 298 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + + A QNG+ G L +IN G V Y+N + +LGQ+ +A F+N +GL G+ Sbjct: 299 DFS-VAAVDQNGFATGKLTGLEINTTGEVFARYTNGEALILGQVAMALFSNEQGLNPLGE 357 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 W+ + SG ++G TGN G + +GALE SNVDLS+ELV +I+AQRN+Q+NA+TI+T Sbjct: 358 TGWAQSFESGEPVVGAPLTGNLGGIQSGALEESNVDLSEELVRLIIAQRNFQANAKTIET 417 Query: 391 QDQILNTLVNLR 402 D + ++N+R Sbjct: 418 ADTVTQAIINIR 429 >UniRef50_Q1I728 Flagellar hook protein FlgE n=8 Tax=Pseudomonas RepID=Q1I728_PSEE4 Length = 463 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 162/468 (34%), Positives = 246/468 (52%), Gaps = 73/468 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA LDV GNNIAN T GFKS A FAD++AG+ +VG GV Sbjct: 1 MSFNIGLSGLYAANKQLDVTGNNIANVNTNGFKSSRAEFADVYAGANRLGVGKNQVGNGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 ++A ++Q F G NTG LD+ I GFF L D NGS+ YSR G F+ +++ +V Sbjct: 61 RLANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSD-NGSLSYSRAGAFQTNKDNFVVTSD 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---PL----- 164 GL+L GY A IQ+G T++ I + +A K+TT INLNSS PL Sbjct: 120 GLRLQGYAADAN-GKIQKGV-LTDLKIDTSALAPKSTTLIDQGINLNSSALDIPLQVWDA 177 Query: 165 ----PTVT---PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----Q 213 P + PF ++ +Y+ V+DSQGN H M ++ KTG N W +YT + Sbjct: 178 TATPPAMVPNKPFDPTDRTTYSDSFPTKVYDSQGNEHVMEQFYRKTGTNEWTMYTLVDGR 237 Query: 214 DSSDPNSIAKTAT-----TLEFNANGTL-----------------VDGAMANNI------ 245 + P + A T T+ FN +G++ + ++ NNI Sbjct: 238 NPFTPGAAAPAGTTPLTGTINFNPDGSVKNMSTAATGVPTTPAGQFEWSVTNNIFSMKGW 297 Query: 246 ------------ATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 + GA+ A+ S +NS A ++ +Q+GY G L + I Sbjct: 298 VPAAKDAAGNWASNGAVGNADGMRLS---MNSTTSYNTATARMSQSQDGYATGILSNLSI 354 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 + G + ++SN+Q++ +GQ+ +A+FAN +GL G W + +SG+ + TG G Sbjct: 355 DSTGVMFASFSNQQSRAIGQVAIASFANPQGLQQIGGTRWKESFASGIPGIDAPKTGTLG 414 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++ + +LEASNV+L++ELV +I AQ NYQ+NA+TI T+ I+ T++ + Sbjct: 415 SVESNSLEASNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQM 462 >UniRef50_Q5ZW68 Flagellar hook protein FlgE n=5 Tax=Legionella RepID=Q5ZW68_LEGPH Length = 437 Score = 220 bits (561), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 157/442 (35%), Positives = 238/442 (53%), Gaps = 45/442 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-------SKVGLGVK 53 M F+ A+SG+ A+ +L+VIGNNIANSAT GFK A FAD+++ + VG GVK Sbjct: 1 MVFNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGSNAVGGGVK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + Q F GT + + LD+A++ +GFF L D G+ Y+R GQFKL+ +VN Sbjct: 61 LSRVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQ-GAKIYTRAGQFKLNNENYIVNANN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTG T + I + I+ N + + ++ S+ +NLNS P V + Sbjct: 120 QRLTGL-LTDSNGAITGASGDLRINTAN--ITPRASSNVSVGVNLNSQSKAPNVDWVGGA 176 Query: 174 NA--DSYNKKGSVTVFDSQGNAHDMSVYFVKTG----------------DNNWQVYTQ-- 213 + D+YN S T++DS GN+H +S+YF+ +N W V Q Sbjct: 177 SPATDTYNNVTSSTIYDSLGNSHVLSMYFIHADSTALAGSPNAASPAGTENQWYVAFQID 236 Query: 214 -DSSDPNSIAKTATTL---EFNANGTLV------DGAMANNIATGAIN---GAEPATFSL 260 + PN A+ L FN++G+ + A+ NN+ + N G+ P ++ Sbjct: 237 NQNVPPNVGAQNTNNLFRANFNSDGSFAGVFDTSNAALPNNLIPLSFNLNNGSSPLNLNI 296 Query: 261 SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 +S Q + + + NGY G L I+D G + G Y+N Q+ +GQI LANFA Sbjct: 297 DLSDSTQFGS-PFAVQSAYNNGYTTGSLAGLDIDDSGMIYGRYTNGQSLAMGQIQLANFA 355 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 + E L + G+ W+ T +SG L+ G+G G + +G LE SNVDL+ ELV +I AQRN Sbjct: 356 DPESLQNIGNTSWAETTASGQPLISAPGSGGLGLINSGRLEESNVDLTGELVKLINAQRN 415 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 +Q+NAQTI+T D I T++N+R Sbjct: 416 FQANAQTIRTGDAITQTIINIR 437 >UniRef50_B4UFG1 Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=B4UFG1_ANASK Length = 428 Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 137/425 (32%), Positives = 225/425 (52%), Gaps = 27/425 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKVA 55 A S +GL A++ L V+G+NIAN+ T GFKSG A+F D + S ++GLG ++A Sbjct: 6 ALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSRLA 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS---VFYSRNGQFKLDENRNLVNMQ 112 G+ + T G +TG D+A+ NGFF + ++ FY+R+GQF +D++ LVN++ Sbjct: 66 GVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVNLE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GL++ G+PA P+ P ++ + + TT +++ NL + +PT A Sbjct: 126 GLRVQGFPAD---PSGALAGLPDDLLVGTASAQPRATTRLTLKANLQADAAVPTAAWDPA 182 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--NWQVYTQDSSDPNSIAKTAT---- 226 + + N ++TV+D+ G H + VYF KTGD +W T + A T Sbjct: 183 NPGATSNFSTTMTVYDALGAGHAVQVYFRKTGDGAWDWHALTDGAGVAGGTAGQLTQIAG 242 Query: 227 -TLEFNANGTLVDGAMANNIATGAINGAEPATFSL--------SFLNSMQQNTGANNIVA 277 TL F G L ++ +P FS + L + Q + + Sbjct: 243 GTLAFGDGGELTSMTQTSSFTPAGQAAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTF 302 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 Q+GY G L S ++ +G + G ++N QT++LGQ+ +A FA + L G N+ T Sbjct: 303 IGQDGYGSGQLASVRVGPEGVISGVFTNGQTRVLGQVAVAGFAAPDQLDRAGGNLLQQTP 362 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG ++G AG+G ++ G+LE SNVDL+++ V +I AQR +Q+N++TI T DQ+L+ Sbjct: 363 GSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSE 422 Query: 398 LVNLR 402 L+ ++ Sbjct: 423 LIAMK 427 >UniRef50_Q74G30 Flagellar hook protein FlgE n=2 Tax=Geobacter RepID=Q74G30_GEOSL Length = 419 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 146/419 (34%), Positives = 225/419 (53%), Gaps = 24/419 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 A +SGLNA + VIGNNI+N T GFK G F+D+ + GS++G GV++ Sbjct: 6 ALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQT 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 + FT G+ +T G D+AI + FF + +++G +Y+R G F ++++ LVN +G Q+ Sbjct: 66 VENQFTQGSFESTESGTDLAIQGDSFFVVQNTSGR-YYTRAGAFSFNKDKTLVNPEGYQV 124 Query: 117 TGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 GY P++G + + + TN + K T+T +NL+S+ PT+ A+ Sbjct: 125 MGYGIIPSSGLSDGVLKPIDLTNFAT----TPPKQTSTVKFVVNLDSTQTTPTLAWDPAN 180 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--NWQVYTQDSS--DPNSIAKTAT-TL 228 + N S++V+DSQGNAH +VYF KT DN +W V D++ P S TL Sbjct: 181 PVATSNYSTSLSVYDSQGNAHTATVYFRKTADNAWDWHVILPDAAAGTPGSTTTPIDGTL 240 Query: 229 EFNANGTL-----VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 F+A G L + GA N G + +P F L + + Q ++ + + TQ+GY Sbjct: 241 TFDATGALTAQTPLAGAAQNITFAGGVTAPQPIFFDLG-VGATTQYASSSVVSSQTQDGY 299 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L I+D G V G YSN Q Q L Q+ LA F++ GL+ G ++ T SG L Sbjct: 300 YQGTLTKVTIDDKGYVNGVYSNGQLQKLYQVALAKFSSTAGLSKAGGTLFEETLESGQPL 359 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A T G + +LE SNVD++ + V MI QR Y +N++TI T D++L +++L+ Sbjct: 360 FSDASTPGVGKILANSLEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLSLK 418 >UniRef50_A3JJM5 Flagellar hook protein E n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJM5_9ALTE Length = 435 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 152/447 (34%), Positives = 238/447 (53%), Gaps = 57/447 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-------SKVGLGVK 53 MAF+ +SGL AAA +LDV GNNIAN++T GFK F D++A + VG G+ Sbjct: 1 MAFNTGLSGLRAAAVDLDVTGNNIANASTVGFKGSRVQFGDLYANGFLSSGNAPVGDGIS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F G + T GLD AI +GFF ++++ G + YSR GQF D++ +VN Q Sbjct: 61 VQSVKQSFGQGNVSFTDNGLDFAIDGDGFF-VLNNGGELRYSRAGQFGTDKDGFVVNNQN 119 Query: 114 LQLTGY--PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP-- 169 +++ G+ A G I+ ++ I + ++ + TT +NL++ + + T TP Sbjct: 120 MRVQGFVADAAGNLSGIRD-----DLQIGSDNLSPQRTTNLRTDLNLDAREQVLTATPPI 174 Query: 170 -FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSIAK 223 F + +YN + +FDS GN H+++ ++ K +NW ++ Q + A Sbjct: 175 PFDPLDPTTYNHVTATNIFDSLGNPHEVTQFYTKQAPASGSQSNWLLHLQIDGEAVGGAA 234 Query: 224 TATT---------LEFNANGTLVDGAMANNIATGAINGA-----------------EPAT 257 +TT L F+ +G L A A++ A G I+ A A Sbjct: 235 GSTTTPPNFVPYELVFDQSGNL---ASADSNANGVISIANWVPKDGDLNANGAASGAGAA 291 Query: 258 FSLSFLNSMQ--QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 F L+ ++ Q N G N+ Q+G+ G L ++ G + Y+N Q++ LGQ+ Sbjct: 292 FDLNLGSATQYGANFGVND---QRQDGFTTGRLSGLDVSQQGVIFARYTNGQSKSLGQVA 348 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 LA+F N +GL+ GD W T SG A++G +G G + + ++E SNVDLS ELVN+I Sbjct: 349 LASFNNTDGLSPSGDTSWVETFESGQAVIGRPDSGTLGAIQSSSVEESNVDLSAELVNLI 408 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 +AQRNYQ+NA+TI+T D + T++NLR Sbjct: 409 IAQRNYQANAKTIETSDAVTQTIINLR 435 >UniRef50_C1DW30 Flagellar hook protein FlgE n=3 Tax=Sulfurihydrogenibium RepID=C1DW30_SULAA Length = 409 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 142/417 (34%), Positives = 230/417 (55%), Gaps = 28/417 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------KVG 49 +F AVSGLN +DVI +NIAN T GFKS +F D+ A S ++G Sbjct: 4 SFYTAVSGLNGNQKWIDVISDNIANVNTIGFKSERVTFEDLVAKSLTTFANNTPKNMEIG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G +A T+DF+ G+ NT LD+A+ GFF + D+ G+V+Y+R GQF+LD N ++V Sbjct: 64 GGSFIALTTKDFSQGSFQNTVNPLDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANGDIV 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQ-INLNSSDPLPTVT 168 N+ G++L G+ T I + I+IP +++ + TT ++ NL+S + T++ Sbjct: 124 NVDGMKLQGW-KLDTAGNISAALD--KINIPYSILPSITTKINLVEPTNLDSR--VNTIS 178 Query: 169 -PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT- 226 +N ++N S+T++DS GN H ++ YF K+ N W V D N+ + Sbjct: 179 GTIDPTNPATFNYANSMTIYDSLGNPHTLTFYFQKSSPNTWNVAAY--VDNNTTTPVGSG 236 Query: 227 TLEFNANGTLVDGAMANNIATGAINGA-EPATFSLSFLNSMQQNTGANNIVATTQNGYKP 285 TL+F++ G L+ G+ ++ NGA P T ++ Q ++ I Q+G+ Sbjct: 237 TLQFDSTGKLISGSPI-TLSIPLTNGATTPQTVTVDLTQVKQ--VASDFIFYANQDGFAK 293 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 GDL+ +++DG V G YSN + +L+ ++ +A F + E L +G+N++ S ++ Sbjct: 294 GDLIGVSVSEDGVVRGMYSNGKVELIARLAVATFKDKEMLVRKGNNLYLPNTQSFTPIIT 353 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SNVD+SKE +N+I AQR YQ+NA+ I T DQIL +N++ Sbjct: 354 PGGI--LSKVRSGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEAMNIK 408 >UniRef50_A3NFX5 Flagellar hook protein FlgE n=13 Tax=Betaproteobacteria RepID=A3NFX5_BURP6 Length = 395 Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 141/403 (34%), Positives = 216/403 (53%), Gaps = 15/403 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SG+NA + L+ I +NIAN+ TYGFK+G A+FA M AG++ G + ITQ Sbjct: 1 MSFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQAN-GTYIGSITQS 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 T G TGR LD AI NGFF DS+GS+ ++R G F+ D + +V+ G + GY Sbjct: 60 VGTRGGFLPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRAQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 A+G +I +P AK + + NL++ P F + S+N Sbjct: 120 GASGAY---------GDIRVPTDTEPAKASDSLEYVGNLSADWAAPKNPNFDKDDDTSFN 170 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV---YTQDSSDPNSIAKTATTLEFNANGTL 236 + TV+DS G H ++ YFVK + V Y D T L+F+ NG L Sbjct: 171 HSVASTVYDSLGRQHIVTQYFVKGQPPSTDVIAYYAMDGEIVGGNTPVQTVLQFDTNGQL 230 Query: 237 VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 ++ G GA +++ + Q G NGY G +++D Sbjct: 231 TAPNSPVDLDLGTPAGASALAIKVNYAGTTQV-AGETTTTVNRDNGYAAGVPGEVMLDED 289 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G VV YSN + + +G + LA FAN +GL++ GD W A+ +SG L+G+AG+G G + Sbjct: 290 GGVVVQYSNGKQRKVGSLALATFANQDGLSAVGDTAWRASAASGNPLIGSAGSGALGKVV 349 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G+LE SN D+++ELV+M+ AQRNYQ+N++ + T++Q++ L+ Sbjct: 350 AGSLELSNADVTQELVDMMSAQRNYQANSKVLSTENQMMQALM 392 >UniRef50_A4SL12 Flagellar hook protein FlgE n=3 Tax=Gammaproteobacteria RepID=A4SL12_AERS4 Length = 446 Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 150/448 (33%), Positives = 214/448 (47%), Gaps = 48/448 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG+NAA +L+V NNIAN T GFK A FAD++A S +VG GV Sbjct: 1 MSFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVA 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + F G T LD+AI NGFF D +N Y+R G FKL+EN +VN Sbjct: 61 TGAVAHQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNN 120 Query: 112 QGLQLTGYP--ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 QG L GY GTP + A I +P+ K T NL+ P Sbjct: 121 QGHYLQGYEINTDGTPKAVSINAT-KPIQVPDRAGEPKMTELVEASFNLSIESKTKPTDP 179 Query: 170 --FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD----------NNWQVYTQDSSD 217 F +N+ ++ SVT++DS G H ++ YFV+ D W +Y + Sbjct: 180 AAFDPTNSATFAHSTSVTIYDSLGAPHVITKYFVRHEDPVTPGTPMTPGTWSMYMYEGDK 239 Query: 218 PNSIA----------KTATTLEFNANGTLVDGAMANNIATGAI-------------NGAE 254 P IA T + F + G L D A+ I NGA+ Sbjct: 240 PIDIASGAPSPGPGIPTGVQMTFTSGGKL-DPALTIPAPPAPIKTVTLGTAAGIINNGAD 298 Query: 255 PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 P L+ + Q N+ TQ+G G+L +I DG V YSN T + + Sbjct: 299 PTQAVEIRLSDVTQYNSPFNVTKLTQDGATVGNLTKVEITPDGIVSATYSNATTLKVAMV 358 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 LA FAN++GL GD W + SG AL GT +G G++ + A+E SNVDL+ +LVN+ Sbjct: 359 ALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSAVEQSNVDLTSQLVNL 418 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNLR 402 I AQRN+Q+N+++++ + T++ +R Sbjct: 419 ITAQRNFQANSRSLEVNSSLQQTILQIR 446 >UniRef50_Q3A5C5 Flagellar biosynthesis, hook protein n=2 Tax=Desulfuromonadales RepID=Q3A5C5_PELCD Length = 413 Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 145/420 (34%), Positives = 225/420 (53%), Gaps = 26/420 (6%) Query: 1 MAFSQA----VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKV 48 MA S A +SG+N T + VIGNNIAN+ T GFKS F+D+ A S+V Sbjct: 1 MALSSALYSGISGMNTNGTAMSVIGNNIANTNTVGFKSSRTVFSDLLASSVNGSGGASQV 60 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDENRN 107 G G ++ + F+ GT T D+AI G F + + S++Y+R G F D Sbjct: 61 GRGTGLSTVDNLFSQGTFETTESQTDLAIEGEGLFVVREEGAESLYYTRAGSFSFDGEGF 120 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPT 166 L N +G ++ G + A+ T+I + N + AK T ++ NL++++P+ T Sbjct: 121 LTNAEGYRVQGKTYVNG---VLSSADATDIMVDINAGIEAKMTDKITLSTNLDANEPVIT 177 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN--SIAKT 224 F ++ +YN S T++DS GN H M+ YF+K+ DN W D +D S A Sbjct: 178 A-AFDPNDTTTYNYSNSTTIYDSLGNTHLMTTYFIKSDDNTWDWNVVDENDATLYSSATA 236 Query: 225 ATTLEFNANGTLVDGAMANNIATGAIN-GAEPATFSLSF-LNSMQQNTGANNIVATTQNG 282 +LEF+ +G + G A G + GA A+ +++F L + Q + +++ TQNG Sbjct: 237 GNSLEFDTSGKQISGGTA---TLGPLTPGAGTASQTINFALKNTTQFANDSQVISQTQNG 293 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 Y G+L + I+++G V+ YSN + +IVLA F++ GL EG +++SAT SG Sbjct: 294 YGAGNLTNISIDNEGNVLAKYSNGEEIAKSRIVLAKFSSFSGLRKEGASLFSATGESGPP 353 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G GT G + ALE S VDL+ E V MI QR +Q+N++ I T D++L+ L+NL+ Sbjct: 354 RIGVPGT-ELGNIFTNALEQSTVDLAAEFVKMITTQRGFQANSKVITTTDEMLSELINLK 412 >UniRef50_C6NWL1 Flagellar hook protein flgE n=2 Tax=Proteobacteria RepID=C6NWL1_9GAMM Length = 419 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 165/430 (38%), Positives = 242/430 (56%), Gaps = 43/430 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLGV 52 AFS A+SGL AA T+L V+GNNI+N+ T GFKS A FAD + + +VG+G Sbjct: 3 AFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGIGT 62 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 +V + Q FT G T LDVAI+ NGFF+L + NG + YSRNGQF+L+ +V+ Sbjct: 63 RVMTVAQQFTQGNIQTTNNPLDVAINGNGFFQL-NYNGDIVYSRNGQFQLNSGGVIVDGN 121 Query: 113 GLQLTGYPA-----TGT--PPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 G +L G A TG P T+ Q A P + ++ ++ +NLNS++ Sbjct: 122 GAELLGIQAQNGKLTGATGPLTVSQNALP-----------PQASSGITLALNLNSTNQNL 170 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF----------VKTGDNNWQVY---T 212 + F+ ++ ++YN S T++DS G ++ Y+ T W VY T Sbjct: 171 SGAAFNINDPNTYNYSTSNTIYDSLGTPQLVTTYYQLVSGGTGSTTATSGETWNVYYSAT 230 Query: 213 QDSSDPNSIAKTATTLEFNANGTLVDGAMAN-NIATGAINGAEPATFSLSFLNSMQQNTG 271 + + + L F++ G LV G N N +GA+ +T ++S+ S N Sbjct: 231 GTTGSGGITSGSLGQLVFSSTGQLVSGGPFNVNPPLNWQDGAQSSTLNVSYSGSTNYNA- 289 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 N +V+ T NGY G L I+ G + YSN Q+Q+LGQI L FANN GL + G+N Sbjct: 290 PNAVVSATTNGYGVGQLTGLSIDPGGNIYARYSNGQSQVLGQIALTRFANNNGLQNLGNN 349 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 W+++ SSG+ L G G+ N G L +GA+E SNV+LS++LVN+IVAQ+ YQ+NAQTIKTQ Sbjct: 350 YWASSYSSGLPLSGAPGSTNLGVLQSGAVEQSNVNLSQDLVNLIVAQQAYQANAQTIKTQ 409 Query: 392 DQILNTLVNL 401 + ++ TL++L Sbjct: 410 NTVVQTLLSL 419 >UniRef50_B4RV33 Flagellar hook protein n=29 Tax=Gammaproteobacteria RepID=B4RV33_ALTMD Length = 461 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 154/462 (33%), Positives = 231/462 (50%), Gaps = 61/462 (13%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG++AA +LDV NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLAGGKTKVGDGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYS--RNGQFKLDENRNLVNM 111 + Q F+ G+ T LD+AI+ NGFF V S +S R GQFKLD + +VN Sbjct: 61 TQEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNS 120 Query: 112 QGLQLTGYP--ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G L G+P A GT ++ + IP++ + + T+ +++NL + D Sbjct: 121 NGDNLLGFPVNADGTSASVALSTTEP-VRIPDSSGSPQQTSEVDIRMNLPAGDAGLDPQD 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQ------------ 213 F+ + +YN SVTV+DS G++H M+ YF+K G DN W V T Sbjct: 180 FNPEDPLTYNAATSVTVYDSLGDSHVMTYYFIKDGSPGVDNEWYVATAIDDTLVDMTDSA 239 Query: 214 -DSSDP----NSI------AKTATTLEFNANGTL-----------VDGAMANNIATGAI- 250 + +DP NS+ A TA+ L F+ G +D M I Sbjct: 240 GNDTDPATAVNSVGGNTGNAVTASKLIFSQGGDFSGMETPDGNATLDFKMQTEALGAGIL 299 Query: 251 -NGAEP-ATFSLSF--------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVV 300 NG++P S+ F N Q A + + Q+G G L I DG V Sbjct: 300 ANGSDPNQQISIDFNLDVNSATPNEPTQFASAFEVTSLEQDGLPVGRLTGIDIGPDGLVR 359 Query: 301 GNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGAL 360 +SN ++ + ++ L F+N +GL E W + SG AL G A TG FG + + AL Sbjct: 360 ATFSNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSAL 419 Query: 361 EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E +NV+L+ EL++MI+AQRN+Q+N++ ++ + + T++N+R Sbjct: 420 EQANVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNIR 461 >UniRef50_A7K5D1 Flagellar hook protein FlgE n=56 Tax=Vibrionales RepID=A7K5D1_VIBSE Length = 437 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 137/440 (31%), Positives = 227/440 (51%), Gaps = 50/440 (11%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVKVAGIT 58 ++SGL+AA +L+ NNIAN+ TYGFK A FAD++ A + G G + + + Sbjct: 5 SLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQVA 64 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFF-----RLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 Q F +G++ T +D+ +S GFF RL + +RNG F L++ +V Sbjct: 65 QQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNEL--TRNGAFHLNKENYMVTAND 122 Query: 114 LQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 L GY P++G + + P I+IP K T + +NL ++ L T F Sbjct: 123 EFLLGYQVDPSSGEVSSYE----PQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQF 178 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVY----TQDSSDPNSIA-- 222 S+ D+YN+ S T++DS G ++ ++ Y++K T N W Y ++ P ++A Sbjct: 179 DFSDPDTYNRSTSSTIYDSMGQSYKLTTYYLKDQTQPNTWNTYYTVTDKEGEKPLNVAAG 238 Query: 223 -------KTATTLEFNANGTLVD------------GAMANNIATGAINGAEPATFSLSF- 262 T++FN +GTL G A N +NGA+PA +L+F Sbjct: 239 DAQTPTGHVGHTMKFNNDGTLASLNNGQPITSVALGDPATNTTPVDMNGADPAQ-TLNFG 297 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L S Q + ++G G L +++G+V+G YSN + LG++ L N Sbjct: 298 LGSATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVMGTYSNGENVTLGRVALVRVPNE 357 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 +GL +G W +TQ SG + G + G+FGT+ NG LE SN+D+++ELV++I AQRN+Q Sbjct: 358 QGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISAQRNFQ 417 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +N+++++ +Q+ ++ +R Sbjct: 418 ANSRSLEVHNQLQQNILQIR 437 >UniRef50_B5YIG4 Flagellar hook protein FlgE n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIG4_THEYD Length = 434 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 140/431 (32%), Positives = 215/431 (49%), Gaps = 43/431 (9%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKVAGITQ 59 +SGLNA L VIG+NIAN+ T GFK+ A+FAD+ + + +VG G + I + Sbjct: 9 ISGLNANGLALSVIGDNIANANTVGFKASRANFADILSQTLGGASAMQVGRGTMIIDIQK 68 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 FT GT T LD+AI +GFF + NG +Y+R GQF+++++ +V+ G L Y Sbjct: 69 LFTQGTLETTSNPLDLAIEGDGFFVVQQPNGPTYYTRAGQFRVNKDGYIVDPNGYLLQAY 128 Query: 120 PATGTPPTIQQGANPT----NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN- 174 + N T N+ + + T + Q+NL+S + T + S S Sbjct: 129 Q-------MDVNGNVTGAIGNVYLAGLMSDPSATDLITTQVNLDSREDTTTWSFTSGSTL 181 Query: 175 --ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ---VYTQDSSDPNSIA------- 222 A +YN ++T++DSQGN H + YF KT N W+ VY ++ N + Sbjct: 182 PVAGTYNYSTAITIYDSQGNPHLVYTYFCKTAANTWEAHVVYNNSATGTNYVEVDFDSGT 241 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF------------LNSMQQNT 270 T+ F++NG L D + A S LN+ Q Sbjct: 242 TQPVTIAFDSNGALSDVYVTTPHTPPDPTFRPTAALDFSSWGVTSPQNVDIDLNNSTQYG 301 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 +N +V QNGY G+L++ ++ DG + G ++N Q + + Q+VLA F L G+ Sbjct: 302 SSNAVVFQNQNGYSAGNLIAVTVDQDGVISGVFTNGQVKKVAQVVLAKFVAAHNLTKVGN 361 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 N++ + +SG G GT G + +LEASNVDL++E + MI AQR YQ+N + I T Sbjct: 362 NLYLESYASGGPTYGAPGTVGVGKVYANSLEASNVDLAEEFIRMIAAQRAYQANVRVITT 421 Query: 391 QDQILNTLVNL 401 D +LN L+N+ Sbjct: 422 TDNMLNELMNI 432 >UniRef50_B8KBZ1 Flagellar hook protein n=6 Tax=Vibrionaceae RepID=B8KBZ1_VIBPA Length = 438 Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 135/437 (30%), Positives = 226/437 (51%), Gaps = 43/437 (9%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVKVAGIT 58 A+SG++AA +L+ NNIAN+ T+GFK A F D++ A + G GV+ + Sbjct: 5 ALSGISAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAQKVA 64 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFF-----RLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 Q F +G++ T +D+ IS GFF RL + + +RNG F L+++ +V Sbjct: 65 QQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNEL--TRNGAFHLNKDNYMVTAND 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY G + P+ I+IP K T+ + +NL + L F S Sbjct: 123 EYLLGYQVNGDTGDVLS-YEPSPINIPKEFGKPKQTSNIEVGVNLPAGGDLKDPALFDYS 181 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVY--TQDSSDPNSI------AK 223 + ++YN+ S T++DS G ++ ++ Y++K T N WQ Y DS+ + A Sbjct: 182 DPETYNRSTSSTIYDSMGQSYKLTTYYLKDQTQANTWQTYYTVTDSAGEKPVNILGGDAT 241 Query: 224 TAT-----TLEFNANGTLVDGAMANNIATGAINGAEP------------ATFSLSF-LNS 265 T T T++FN +GTL NNI +G + G P + +LSF L+S Sbjct: 242 TPTGHVGHTMKFNNDGTLASLNSGNNIVSGPLGGTGPDDPNAINLNGADVSQTLSFGLDS 301 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 Q + ++G G L +++G+V+G YSN + LG++ + AN +GL Sbjct: 302 ATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVLGTYSNGENITLGRVAMVRVANEQGL 361 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +G W +TQ SG + G + G+FG++ +G LE SN+D+++ELV++I AQRN+Q+N+ Sbjct: 362 DKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQSNIDMTQELVDLITAQRNFQANS 421 Query: 386 QTIKTQDQILNTLVNLR 402 ++++ +Q ++ +R Sbjct: 422 RSLEVHNQTQQNILQIR 438 >UniRef50_A0LT62 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A0LT62_ACIC1 Length = 398 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 151/421 (35%), Positives = 211/421 (50%), Gaps = 57/421 (13%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGS-----------KVG 49 VSGL A T LDV+GNNIAN T GFK+ F D AG+ +VG Sbjct: 9 VSGLRAHQTMLDVVGNNIANVNTVGFKASQVEFEDTLSQMLRAAGAPQGVQGGTNPAQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV++A I+ FT G TG D+ I +GFF L D G Y+RNG F D N NLV Sbjct: 69 LGVQIAAISTTFTQGPAETTGVDTDLMIQGDGFFVL-DDGGQRVYTRNGAFSFDANGNLV 127 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVT 168 + G + G+ A+G + T I +P T M TTTA++ NL Sbjct: 128 SANGALVQGWLASGG--VVNTTGPVTAIKLPLGTSMPPSATTTATLAGNL---------- 175 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSV-YFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 P S + N ++TV+D++G A ++ Y T N+W++ D P + T Sbjct: 176 PADGSGSPIDN---NLTVYDAKGQATQYTLEYSYDTTSNSWKL---DILPPGGGSPTNVP 229 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSF------LNSMQQNTGANNIVATTQN 281 L F++ TG NG P T +L L+ + G N + + + Sbjct: 230 LSFDST-------------TGQYNGTNPQTVTLGGQNISLDLSGLTAYGGGNTVEVVSSD 276 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G G L SY I+ DGT+ G ++N Q L +I LA F N GL G + ++ + +SG Sbjct: 277 GSAMGSLASYTISPDGTIQGVFTNGMKQPLAKIALATFNNPGGLTKVGTSEYAESVNSGA 336 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A +G +GTG+ G L G LE SNVDLS+E N+I+A+R +Q+NA+ I T DQ+L LVNL Sbjct: 337 AQIGASGTGSRGQLAAGELEGSNVDLSQEFTNLIIAERGFQANAKVITTSDQVLQDLVNL 396 Query: 402 R 402 + Sbjct: 397 K 397 >UniRef50_D1TF51 Flagellar hook protein (Fragment) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF51_9BURK Length = 378 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 138/385 (35%), Positives = 199/385 (51%), Gaps = 42/385 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M++ +SGL+AA+ +LDVIGNNIAN+ T GFK GTA F+DM+A + ++G+GV Sbjct: 1 MSYQTGLSGLHAASNDLDVIGNNIANAHTVGFKQGTAVFSDMYANAMLGATNNQIGIGVA 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM-Q 112 + I +DF++GT T TG LD+ I NGFF L+ NG+ YSRNGQF+ D + N+++ Sbjct: 61 TSAIVRDFSEGTPTQTGNPLDLDIRGNGFF-LLSQNGTPVYSRNGQFQQDSDGNIISSGN 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASM----------QINLNSSD 162 GL L GY P + + L+ T T A++ NLN+ D Sbjct: 120 GLPLMGY-----------AEGPNGVVDTSRLVQLTTATVANLPPMPTSAIAWSFNLNAGD 168 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVY-TQDSSDPN 219 P VTPF +N SYN + T +DS+GN H +S+Y VK N W Y SD Sbjct: 169 DTPKVTPFDPTNNQSYNFATTATTYDSEGNQHQISIYLVKDPATPNQWSAYIAPQGSDVT 228 Query: 220 SIAKTATTLEFNANGTLV-------DGAMANNIATGAING-AEPATFSLSFLNSMQQNTG 271 T + GTL + + + NG A P T ++ N+ Q Sbjct: 229 VDNGTGAPSSYTQIGTLTFDSSGRLTSSSSLSFEMSMTNGSASPQTIAIDLGNTTQYAAT 288 Query: 272 ANNIVATTQNGYKPGDL-VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 +++ +GY + + DDGT+ Y+N +T ++GQ+ A FAN GL S+ Sbjct: 289 TDSVTRYHPDGYAAAAYNGTLSVADDGTITAGYTNGETLVIGQVATATFANPNGLESQSG 348 Query: 331 NVWSATQSSGVALLGTAGTGNFGTL 355 N++ ATQ+SG A +GT GT N G L Sbjct: 349 NLFYATQASGSAQIGTPGTFNHGAL 373 >UniRef50_A6F9Q0 Flagellar hook protein n=2 Tax=Gammaproteobacteria RepID=A6F9Q0_9GAMM Length = 437 Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 148/444 (33%), Positives = 225/444 (50%), Gaps = 53/444 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++S +SGL + L+VI NIAN T GFKSG A F+ +++G G GV+VA I+ + Sbjct: 1 MSYSIGLSGLRSTNEQLNVISQNIANVNTSGFKSGRAEFSSVYSGGSAG-GVEVAAISSN 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F DG NTGR +D+AIS GFF ++++ G Y+R G F + + + G +L GY Sbjct: 60 FDRDGDVVNTGRSMDLAISGRGFF-VLNNGGETSYTRAGSFVRNASNYIETSSGARLQGY 118 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS-NADSY 178 P + +++ + + AK +++ NL + P + D Y Sbjct: 119 PVDANGALLS--GVISDLKVGTGTLPAKASSSVEFAANLKADAAAPATAFDPTNIQPDMY 176 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVK------------------------------------ 202 N S VFDS G H ++ YFVK Sbjct: 177 NYSQSGKVFDSLGREHVLTQYFVKQVPGPAVTAVAAKPAVIADPTATPKVIGSPEVKAVA 236 Query: 203 ----TGDNNWQVYTQDSSDPNSIAKTAT-TLEFNANGTLVDGAMANNIATGAINGAEPAT 257 T +N W V+ D TAT TL F+ +G + + ++ I GA+P + Sbjct: 237 ARGITVENEWDVHY--FIDGQKAGTTATQTLNFDTSGNITSPTGSVELSQ-TITGADPLS 293 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 +S N M QN + ++ NGY GDL + +I+DDG++ G Y+N Q +L G+++LA Sbjct: 294 IKISMTN-MSQNAASFSLSRNETNGYGAGDLKTIRIDDDGSLYGVYTNGQDKLQGKVILA 352 Query: 318 NFANNEGLASEGDN-VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 NFAN GL +GDN W + +SG +G +G G+LT+GA E SNVDL+ ELV+++ Sbjct: 353 NFANPNGL-RQGDNTTWGQSFASGAPTVGLPSSGTLGSLTSGAYEGSNVDLTGELVSLMT 411 Query: 377 AQRNYQSNAQTIKTQDQILNTLVN 400 AQRNYQ+N++TI +++ L N Sbjct: 412 AQRNYQANSKTISAAEKMTQVLFN 435 >UniRef50_Q15R85 Flagellar basal body FlaE n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R85_PSEA6 Length = 458 Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 149/459 (32%), Positives = 233/459 (50%), Gaps = 58/459 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG++AA +LD NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYS--RNGQFKLDENRNLVNM 111 + Q F+ G+ T LD+A++ NGFF + S +S R G FKLD +VN Sbjct: 61 TQEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNS 120 Query: 112 QGLQLTGYPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G L G+P GT ++ + IP++ + + T+ S+++NL + D + Sbjct: 121 NGDNLLGFPVNPDGTSSSVALSTTQA-VRIPDSSGSPQPTSEVSLKMNLPAGDDAVDLDL 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQV--YTQDSS--------- 216 F+ + +YN SVTVFDS G++H M+ YF+K N W V Y D + Sbjct: 180 FNPDDPLTYNAATSVTVFDSLGDSHVMTYYFMKDQAATNEWVVTTYMDDIALNTEGDTPG 239 Query: 217 -----DPNSIAKTATT------LEFNANGTLVDGAMANNI--ATGAI-----------NG 252 PN + +T + + F+A G A A+ ATG I NG Sbjct: 240 VPPITGPNVVGETTGSPVAGYRMTFSAGGDFTSIANADGTSSATGDITSVALGGTILANG 299 Query: 253 AEPA-TFSLSFL--------NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 ++P+ T + +F + Q A + + Q+G G L I DG V Y Sbjct: 300 SDPSQTITTNFAFDPGNATPDEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATY 359 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 SN ++ + ++ L FAN++GL + + W + SG AL G A TG FG + + ALE + Sbjct: 360 SNGTSEPIIRVALVRFANDQGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQA 419 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NV+L+ EL+++I+AQRN+Q+N++ ++ +Q+ T++N+R Sbjct: 420 NVNLTTELIDLIIAQRNFQANSRALEVNNQLNQTILNIR 458 >UniRef50_D2S9L8 Flagellar hook-basal body protein n=3 Tax=Actinomycetales RepID=D2S9L8_9ACTO Length = 408 Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 153/421 (36%), Positives = 220/421 (52%), Gaps = 45/421 (10%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------------AG----SKV 48 A+SGL A T LDV GNNIAN T G+K+ F D AG ++V Sbjct: 8 AISGLRAHQTKLDVTGNNIANVNTVGYKASQTVFEDTLSQVVRNGSAPTAQAGGTNPAQV 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLGVKVAGIT +F G+ NTGR D IS +GFF + + Y+R G F D NL Sbjct: 68 GLGVKVAGITTNFEQGSAQNTGRSTDFMISGDGFF-ITQAGNEQLYTRAGSFSYDGAGNL 126 Query: 109 VNMQGLQLTGYPATG----TPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 V G L G+ AT T I+Q +++P +M T ++ NL+S+ Sbjct: 127 VTPDGALLQGWMATDGVVNTNGPIRQ------LTVPFGDVMQPTETDNGAVVGNLSSA-- 178 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 A+N + +T++D+ G AH +S+ F KTGDN W V +D ++ +A Sbjct: 179 --------AANGTGVQTQ--MTMYDALGKAHQISLSFTKTGDNTWNVVARDENEA-VLAS 227 Query: 224 TATTLEFN-ANGTLVDGAMANNIATGA-INGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 TA L FN GTL + I A + G+ P ++ L ++Q G + + + Sbjct: 228 TAGPLAFNPVAGTLPAASRTFQITPDASMAGSWPGQVTID-LADLRQFGGPSGLTPARVD 286 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G G L S ++ DGTV+G YSN + +G++ LA FAN GLA G++ + +SG Sbjct: 287 GNAMGSLQSISLSGDGTVMGVYSNNLREPIGKLALATFANPGGLAKAGNSSFRVGDNSGQ 346 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G G G G+L GALE SNVDL++E +IVAQR +Q+N++ I + D++L LVNL Sbjct: 347 PAIGEPGGGGRGSLVAGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSSDEVLQDLVNL 406 Query: 402 R 402 + Sbjct: 407 K 407 >UniRef50_C8WYV8 Fagellar hook-basal body protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYV8_DESRD Length = 433 Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 148/441 (33%), Positives = 230/441 (52%), Gaps = 54/441 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A VS L A ++VIGNN+ANS T FK+ F+D+ A +VG GV Sbjct: 6 ALYTGVSALGATGEAMNVIGNNLANSNTTAFKASRTLFSDLLASDVSSSSGTSQVGTGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 +A + F+ G T D+AI GFF++ D N G+ Y+R G F ++ LVN Q Sbjct: 66 LASVDTVFSQGGFNPTESSTDLAIEGEGFFKVSDPNTGADAYTRAGGFNFNDEGFLVNPQ 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNI------SIPNTLMAAKTTTTASMQINLNSSDPLPT 166 G ++ GY G T+ N +I S+P A+ T AS+ NLN+S + Sbjct: 126 GYRVQGYDVDGDGNTV---GNLKDIYTDLSGSVP-----AQETGRASLSTNLNASAEVGA 177 Query: 167 VTPFSASN-ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-TQDSSDPNSIAKT 224 F ++ A + N S+ V+DS G +H +VYF K G N W + T D N++ K+ Sbjct: 178 --SFDINDPAGTSNFSTSINVYDSLGTSHLANVYFTKAGSNAWNYHVTADVGGTNTVLKS 235 Query: 225 ATTLEFNANGTLVD---------------GAMANNIAT--------GAINGAEPATFSLS 261 ++F + G L + G NN+ T NG++ F + Sbjct: 236 HQ-IKFTSTGYLKEVDGNSYMNEKGEIPAGQEGNNVITVKNTGNPINWGNGSDGHVFDVE 294 Query: 262 FLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 F ++ Q G + +V+ Q+G+ G L +++ +G V+G+YSN +++ L ++ LA FAN Sbjct: 295 F--NLSQYAGQSELVSKQQDGFSSGALNGIEVDQEGMVIGSYSNGESKDLAKLGLAKFAN 352 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 N GLA G++++ AT +SG+ +GT G G GT+ + ALE S VD++K+ +MI QR Y Sbjct: 353 NNGLAQVGNSLFEATNASGLPAIGTPGAG-VGTIRSNALEQSTVDIAKQFTDMITTQRAY 411 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 Q+N++TI T D +L +VNL+ Sbjct: 412 QANSRTITTTDDMLQEVVNLK 432 >UniRef50_A6W8K5 Putative uncharacterized protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8K5_KINRD Length = 462 Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 156/465 (33%), Positives = 225/465 (48%), Gaps = 81/465 (17%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 VSGL + T +DV+GNNIAN T GFKS + FAD + ++VG Sbjct: 9 VSGLRSHQTMMDVVGNNIANVNTAGFKSSSVVFADTLSQLTKAAGAPTDAAAGTNPAQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV+V ITQ+ T G+ TG+ D+ + +G F + +G+ FYSRNG F LD N ++V Sbjct: 69 LGVRVNAITQNMTQGSAQATGKSTDLMLQGDGMFAIQQGDGT-FYSRNGSFTLDANGSVV 127 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTN-----ISIP-NTLMAAKTTTTASMQINLNSSDP 163 G + G+ A GA TN + IP +T+M A TT A + N++ + Sbjct: 128 TNDGGYVMGWKADAA------GAVNTNGQIGKLVIPSDTVMPAVATTEAKFKGNIDRTFK 181 Query: 164 LPTVTPFS------ASNADSYNKKGSVTV----FDSQGNAHDMSVYF------------- 200 PT P + +S D K +VT +D QG A + V F Sbjct: 182 TPTALPAADQYVTGSSPGDGVIKGTAVTSSFSSYDDQGIATKVFVTFTNDVNYTAATAAS 241 Query: 201 -------------VKTGDNNWQVYTQDSSDPNSIAK-----TATTLEFNANGTLVDGAMA 242 V N W V DS+ + K TA T+EF+ +G A Sbjct: 242 TDANGVVTPAKAAVYEPTNVWHVKAVDSNGKEVVLKKADGTTAETVEFDPDGA----AKG 297 Query: 243 NNIATGAINGA-----EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 N + GA + L+ L S TG +N V +G G L + DG Sbjct: 298 TNSMVATVEGAGTKADSTVSLDLTGLTSYVGTTGTSN-VNPVADGAPIGTLTGFSFGTDG 356 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 + GNYSN Q LGQI +A+F N+ GL EG++++S + +SG + G AG+ G++ Sbjct: 357 VITGNYSNGYKQTLGQIAIASFNNSAGLRKEGNSLYSVSTNSGQPVFGIAGSAGRGSILA 416 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G+LE SNVDLS E N+I+AQR +Q+N++ I + D++L LVNL+ Sbjct: 417 GSLEMSNVDLSAEFTNLILAQRGFQANSKVITSSDELLQDLVNLK 461 >UniRef50_B7R866 Flagellar basal body protein FlgE n=10 Tax=Thermoanaerobacteraceae RepID=B7R866_9THEO Length = 415 Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 142/423 (33%), Positives = 212/423 (50%), Gaps = 42/423 (9%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KV 48 A+SGL A LDVIGNNIAN T G+K+ +F ++F+ + ++ Sbjct: 8 AISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGGGTNPQQI 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLGV +A I FT G T D++I NGFF +V + S+ Y+R G F D N +L Sbjct: 68 GLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFF-IVSNGESILYTRAGNFSFDSNGDL 126 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDPLPTV 167 V G ++ G+ +T N IS+ N M TTT + NLN+S + Sbjct: 127 VTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWFGMEPSTTTQLEIGGNLNASTGI--- 183 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--NWQVYTQDSSDPNSIAKTA 225 + SYN + V+D+QG +H ++ F + N NW V +QD + + Sbjct: 184 -----GQSISYN----IIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVSVAGS 234 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAE------PATFSLSFLNSMQQNTGANNIVATT 279 T + F A+G + A T +N A P LS L T ++ + Sbjct: 235 TAITFGADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTET---DLRELS 291 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 +NG + G L S I+ G V G YSN + Q++GQI LA+F N GL G+ ++ T +S Sbjct: 292 KNGNEAGSLQSINIDKYGVVSGIYSNGRRQVIGQIALADFQNPMGLEKVGNTMFINTVNS 351 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G ++G AG+G G++ G LE SNV+L+ E V+MI QR +Q+NA+ I D++L LV Sbjct: 352 GEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVITVSDEMLQDLV 411 Query: 400 NLR 402 N++ Sbjct: 412 NMK 414 >UniRef50_A8VS11 DNA topoisomerase I n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS11_9BACI Length = 424 Score = 190 bits (482), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 149/433 (34%), Positives = 221/433 (51%), Gaps = 53/433 (12%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM----FAGS--------------K 47 + G+N T LDVIGNNI+N T+GFK G +F D+ AG+ + Sbjct: 8 GIGGMNNFQTKLDVIGNNISNVNTFGFKKGRVTFNDLVSQQLAGASSPQEGERGGTNPRQ 67 Query: 48 VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRN 107 VGLG A I T G+ +TGR LD+AIS +GFF++ D G FY+R G F LDEN Sbjct: 68 VGLGGSTASIDTINTQGSLQSTGRDLDMAISGDGFFQVADG-GQNFYTRAGNFYLDENGM 126 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 LVN GL+L GY G I + A ++ IP + A+ Q++L + Sbjct: 127 LVNADGLRLQGY-GVGDDGAIDEAAGVGDLFIP---AGEQVDPEATSQVDLRGN------ 176 Query: 168 TPFSASNADS-YNKKGSVTVF--DSQGNAHDMSVYFVKTGDNNW----QVYTQDSSDPNS 220 NADS ++ +V F D G ++ + KT +N W + + D D + Sbjct: 177 -----LNADSEIGEERTVRFFITDPLGGEQEIRLLMTKTAENEWDYSLEYWDNDIEDWDI 231 Query: 221 IAKTATTLEFNANGT---LVDGAM-ANNIAT-----GAINGA-EPATFSLSF-LNSMQQN 269 + F+ +GT + G M +N+ G I G E SL+ L+++ Q Sbjct: 232 LPDIGQGF-FDFSGTEDGVSRGRMNLDNLELIVEDLGFIGGPWEGHEGSLNLNLSNVTQF 290 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + + + ++NG G L SY +++ G + G +SN + +LLGQ+ L NF N GL+ G Sbjct: 291 SSRSTVEVESRNGSSDGTLESYTVSETGEINGIFSNGEVRLLGQVALVNFNNPSGLSKAG 350 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 N++ + +SG +G AG G G+L LE SNVDLS+E MIV+QR +Q+N + I Sbjct: 351 SNLFEVSNNSGEPQVGLAGIGGRGSLVGATLEMSNVDLSEEFAEMIVSQRGFQANTRMIT 410 Query: 390 TQDQILNTLVNLR 402 T D+IL L+NL+ Sbjct: 411 TSDEILQELINLK 423 >UniRef50_D2LSH1 Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSH1_BACS4 Length = 411 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 152/428 (35%), Positives = 205/428 (47%), Gaps = 62/428 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + G+ + T LDV+GNNIAN T GFK G +F D+ + Sbjct: 18 AMYAGIGGMKSFQTKLDVVGNNIANVNTSGFKKGRVTFQDLVSQQMSGAATPTDNRGGIN 77 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG + I T G+ TGR LD+ I+ +GFF +V+ G +YSR G F LDE Sbjct: 78 PMQVGLGTSMGSIDTIHTQGSLQTTGRDLDIGITGDGFF-IVNDGGQSYYSRAGNFYLDE 136 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-----NTLMAAKTTTTASMQINLN 159 N +LVN GL++ GY ++ G TN P L+ + T A + NLN Sbjct: 137 NGDLVNANGLRVQGY-------SVVDGELDTNTLGPLQIASGQLIPPQATDEAQFKGNLN 189 Query: 160 SSDPL-PTV-TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD 217 S + TV P+ V DS GN H + + F K N W V + Sbjct: 190 SETQVGETVNVPYP--------------VIDSLGNMHYLELTFQKQAGNEWTVQAGGQAL 235 Query: 218 PNSIAKTATTLEFNANGTLVDGA-MANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 N + F +G+ V M N G N A P L F Q A N Sbjct: 236 GN--------VNFGNDGSFVAADDMTVNFNPG--NNANPLNIELDFSRMSQY---ARNST 282 Query: 277 ATTQ--NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 A +G G L SY I+ G ++G +SN + +LLGQI LA F N GL+ G+N++ Sbjct: 283 ADIHYVSGNVDGTLESYSISQAGEIMGVFSNGEVRLLGQIALATFNNPGGLSKSGNNLYM 342 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 + +SG +G AG G G LT +LE SNVDLS+E MIVAQR +Q+N + I T D+I Sbjct: 343 VSNNSGNPQVGLAGDGGRGMLTGASLEMSNVDLSEEFTEMIVAQRGFQANTRMITTSDEI 402 Query: 395 LNTLVNLR 402 L LVNL+ Sbjct: 403 LQELVNLK 410 >UniRef50_B9MM16 Putative uncharacterized protein n=2 Tax=Clostridia RepID=B9MM16_ANATD Length = 488 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 156/483 (32%), Positives = 229/483 (47%), Gaps = 89/483 (18%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----------------GS--- 46 ++S L A T +DVIG+NIAN T GFKS +FA +FA GS Sbjct: 8 SISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASGRGGSNPM 67 Query: 47 KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR 106 ++GLGV VA + + T G+ T D+AI +GFF + + ++R G F LD+ Sbjct: 68 QIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGNFSLDKMG 127 Query: 107 NLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSDPLP 165 NLV GL + G+ I +P+ I+I + K T S NL++ + Sbjct: 128 NLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNLSADTKIY 187 Query: 166 T--VTPFSA---SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ----------- 209 + +T F ADS S +FDSQG H + + F+KTGDN W+ Sbjct: 188 SGQITKFEDLLNVPADS-KYSTSFKIFDSQGKEHTLQLTFIKTGDNTWEWFVDAPRVKKN 246 Query: 210 -----------VYTQDSSDPNS-----IAKTATTLEFNANGTLVDGAMANNIATGAINGA 253 VY D + N+ IA+ T+ F G ++D ++ AI G Sbjct: 247 IGTAQNPQEAYVYVDDMIEANNDYDNFIAR--GTITFGQAGKVLDDENTPDVEGIAITGG 304 Query: 254 -----EPATFSLSFLN------SMQQNTG------ANNIVATTQN--------------- 281 + TF+++F N +++ N+ A NI +N Sbjct: 305 RFINTQNGTFTINFKNNVVNPVTLKVNSSQFDVNDATNIAFFLKNITQFGNMESSIRVAQ 364 Query: 282 --GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 GY G L + ++ G + G YSN QL+GQI +A FAN GL GDN++ T +S Sbjct: 365 MTGYSAGSLQGFNVDASGKITGVYSNGLNQLIGQIAIATFANPAGLQRIGDNLYINTVNS 424 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G +GT G+G+ GT++ G LE SNVDL+KE +MIV QR YQ+NA+ I D++L LV Sbjct: 425 GDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLV 484 Query: 400 NLR 402 N++ Sbjct: 485 NIK 487 >UniRef50_Q1IR53 Flagellar basal body FlaE n=2 Tax=Acidobacteria RepID=Q1IR53_ACIBL Length = 409 Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 157/422 (37%), Positives = 220/422 (52%), Gaps = 39/422 (9%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGS----KVGLGV 52 FS +SGL A++T L I NN+AN T G+K A F D+F GS +VG G Sbjct: 4 FSIPLSGLTASSTALATIANNLANQNTIGYKQTRALFRDLFYQQIGQTGSGDPIQVGAGT 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + I +FTDG+ + TG DVAI +GFF + NG+ Y+R G FK+ + L Sbjct: 64 MIGTIDTNFTDGSVSPTGVPTDVAIMGDGFF-VAQQNGNDIYTRAGNFKVGADGTLRTQD 122 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G + GY A T G N+ + + TT+ + NLN+S A Sbjct: 123 GAVVLGYQAVDGKVTTGSGLGALNLG-QGQVSSPSATTSLQLTTNLNAS----------A 171 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN-----SIAKTATT 227 DSYN S+ V+DS G H ++ F KTG N W D+S P S+ + T Sbjct: 172 KVGDSYNT--SLKVYDSLGGVHVVTFTFTKTGTNTWDY---DASLPTGEGTVSLPSGSHT 226 Query: 228 LEFNANGTLVDGAMANNI-ATGAINGA---EPATFSL---SFLNSMQQNTGANNIVATTQ 280 L F+++G L + N TG +GA + T+ L + +SM Q + AT Q Sbjct: 227 LTFDSDGKLTTPSSNINFDLTGLSDGASDMKGVTWKLYDATGGSSMTQMAADSATPATAQ 286 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +GY G L ++ I DGT+ G +SN +T ++GQI +A+F N +GL G N + T +SG Sbjct: 287 DGYGSGMLQNFNIGADGTIEGTFSNGKTSIIGQIAIASFPNVQGLRKVGQNAYVGTLASG 346 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 A LG G+G GTL GALE SNVD++ E N+IVAQR YQ+NA+ I T D+I +N Sbjct: 347 QAALGAPGSGGRGTLGGGALELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTIN 406 Query: 401 LR 402 L+ Sbjct: 407 LK 408 >UniRef50_Q1ZPI3 Flagellar hook protein n=3 Tax=Photobacterium RepID=Q1ZPI3_PHOAS Length = 467 Score = 187 bits (474), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 131/468 (27%), Positives = 224/468 (47%), Gaps = 67/468 (14%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+ + A+SGL AA +L+ NNIAN+ T+GFK A F D++ A + G GV+ Sbjct: 1 MSMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF---YSRNGQFKLDENRNLVN 110 + + Q F +G++ T LD+ +S +GFF + D+ +RNG F L+ LVN Sbjct: 61 TSTVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 +G L GYP T+ ++ I + + T + +NL + + P F Sbjct: 121 SEGKFLLGYPVNKDSNTVA-SYEAKSMKIDDVFGQPTKSGTIKVSLNLPNKETAPKSNSF 179 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--------NNWQVYTQ--------- 213 + DS+NK S T++DS G + M+ Y+V D N W+V+ Sbjct: 180 DFKDPDSFNKSTSSTIYDSLGKPYKMTTYYVAKYDPNAVPTNANTWEVHQTVTNNSGEER 239 Query: 214 ----------------DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAI------- 250 D++DP + T + F+ NG G + AT AI Sbjct: 240 LLKPDPTKIPPAYQVIDNTDPTAPVVTGYRMRFDQNGQPYPGDPGDPTATPAIPPTPASP 299 Query: 251 ---------------NGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 GA+P + ++++ + Q + +G G L I+ Sbjct: 300 LNIQMETFASAGIDVGGADPTQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDID 359 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 +G ++ +YSN + ++G++ LA +N +GLA G +W+ TQ SG A+ G A G+FG+ Sbjct: 360 PEGNILASYSNGKDIVVGRVALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGS 419 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +G LE SN+D+++ELV++I AQRN+Q++++ + +Q+ ++ +R Sbjct: 420 VKSGTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQIR 467 >UniRef50_Q3J1S9 Flagellar hook protein FlgE n=5 Tax=Rhodobacter sphaeroides RepID=Q3J1S9_RHOS4 Length = 423 Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 133/432 (30%), Positives = 221/432 (51%), Gaps = 40/432 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+ + A+SGL+AA ++ +NIAN T GF+ A FAD+F S VG GV+ Sbjct: 1 MSINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG------SVFYSRNGQFKLDENRN 107 F+ G+ TG LD+AI GFF + G Y+R G F L+ Sbjct: 61 TLRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGV 120 Query: 108 LVNMQGLQLTGYPATGTPPTIQQ-GANPTNISIPNTLMAAKTTTTASMQINLNSSDPL-- 164 +N G +L +P + + Q + T ++IP T+ + T+T ++ ++L + + + Sbjct: 121 AINASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLG 180 Query: 165 -----PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-------NNWQVYT 212 P F ++ +Y +V +FD++GNA + + YF+KT + +W V Sbjct: 181 TQAAVPPAAAFDPADPTTYAAVTAVPIFDAKGNAVEAAAYFIKTANPTAGNPQTDWAVRL 240 Query: 213 QDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAIN--GAEPATFSLSFLNSMQQNT 270 + +P + A+ L F+A G L G TGA++ A ++++L L Q Sbjct: 241 VVAGEPLTPAQG--DLTFDATGALSGG-------TGALSFTAASGSSYTLD-LTETQLAD 290 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + + +Q+G L S +++ GTV Y +GQ+VL FAN + L G Sbjct: 291 RSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVAMGQVVLVTFANPQALRQLGA 350 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 + ++AT SG + GTAG FG + GALE +NVDL++ELV++I AQRNYQ++A+ ++T Sbjct: 351 SGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITAQRNYQASAKAMET 410 Query: 391 QDQILNTLVNLR 402 + ++ T++N+R Sbjct: 411 SNSLMQTIMNIR 422 >UniRef50_A6DYV2 Flagellar hook protein FlgE n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYV2_9RHOB Length = 419 Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 140/426 (32%), Positives = 211/426 (49%), Gaps = 32/426 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F A+SGLNAA T++ V NNIAN T GF A FAD++ S++G G + Sbjct: 1 MSFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSRPASQIGSGTE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV---DSNGSVFYSRNGQFKLDENRNLVN 110 V+ I DF G+ T TG LD+++ GFF++ D+ Y+R G F ++ + N Sbjct: 61 VSRIGVDFKQGSLTATGNVLDLSLQGPGFFQVRTGPDAGADAGYTRAGAFGMNREGFVTN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD-------P 163 G LT +P + T+ + IP + TT + NL+ S+ Sbjct: 121 AAGHFLTVFPTSENGDTLST-TQTQRLQIPQQFGTPQATTAVDLSFNLSLSNNGGLGAQA 179 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDP 218 F ++ +Y + V D+ G A YFV + D Q D Sbjct: 180 AIPAAAFDPADPTTYAATTQIPVLDAAGRAVPAQAYFVMSDAPDALDGGLAYTVQLVVDG 239 Query: 219 NSIAKT--ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 A T TL F+A G G A N G E A SLS L + + G + Sbjct: 240 VITAPTDPLATLSFDAGGAQTGGLEAMNFDFG-----EQA-LSLS-LGGSRVSEGPFGAI 292 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 A +QNG + DL S + DGTV +Y E + +GQ+ +ANF++ +GL S G + A+ Sbjct: 293 AVSQNGTRQLDLSSVDVRQDGTVWASYGAETSVAVGQVAVANFSDIQGLGSIGSATYRAS 352 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 + SG LG GT FG + G++E SNVDL+++LVN+I+AQRNYQ++A+ ++T + + Sbjct: 353 RESGDVRLGVPGTSGFGAIRAGSVERSNVDLTEQLVNLIMAQRNYQASAKALETNGTLAD 412 Query: 397 TLVNLR 402 T++N+R Sbjct: 413 TVLNIR 418 >UniRef50_C6P7Q7 Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Q7_CLOTS Length = 420 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 148/428 (34%), Positives = 225/428 (52%), Gaps = 47/428 (10%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------AGS-------KV 48 AVSGL A +DVIGNNIAN T GFK+ +F ++F GS +V Sbjct: 8 AVSGLKAHQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQGSGGGTNPQQV 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLGV +A I FT+G + T D++I NGFF +V++ G+ Y+R G F D N +L Sbjct: 68 GLGVAIASIDTLFTNGGSQRTDNPTDLSIDGNGFF-IVNNGGANLYTRAGNFSFDSNGDL 126 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 V G ++ G+ + N + ISI N + T+ ++ I L + T Sbjct: 127 VTPDGYKVMGWISQDGKTVNTDTGNLSPISIKN---WSSTSPASTKLIQLGGNLDAGT-- 181 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--NWQ--VYTQDSSDPNSIAKT 224 S ++ SYN VT++DSQG +H ++ F K DN NW + D +D ++ T Sbjct: 182 --SIGSSVSYN----VTIYDSQGGSHVATIQFTKK-DNAGNWDAAITNFDGNDLSASPVT 234 Query: 225 ATTLEFNANGTLVDGA---MANNIATGAINGAEPA-------TFSLSFLNSMQQNTGANN 274 +++F++NG + + A + N+++ I T LS L +T + Sbjct: 235 IGSIQFDSNGLITNPAGSIFSVNVSSLPITNTNATLGDGTNITIDLSNLTMYSSST---D 291 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 I +++G + G + S I+ G V G YSN +TQ++GQI LA+F N +GL G+ ++ Sbjct: 292 IRELSKDGNEAGSIESINIDQYGVVSGIYSNGRTQVIGQIALADFQNTQGLEKVGNTMFI 351 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 T +SG ++G A TG GT+ G LE SNVDL+ E NMI QR +++N++ I T D+I Sbjct: 352 NTVNSGDPMIGAANTGTRGTINPGTLEMSNVDLANEFANMITTQRGFEANSKVITTSDEI 411 Query: 395 LNTLVNLR 402 L LVNL+ Sbjct: 412 LQDLVNLK 419 >UniRef50_UPI0001850C8F flagellar hook protein FlgE n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850C8F Length = 426 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 150/431 (34%), Positives = 216/431 (50%), Gaps = 49/431 (11%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 +SG+ A T LDVIGNNIAN TYGFK G +F D+ ++G Sbjct: 9 ISGMKNAQTKLDVIGNNIANVNTYGFKKGRVTFQDLMNQTMSGATTPTENRGGQNAKQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG +A I T G+ TGR LDVAIS +G+F +V + + Y+R G F LD N +LV Sbjct: 69 LGGTIASIDIISTQGSLQTTGRSLDVAISGDGYF-VVRNGQNEMYTRAGNFYLDSNGSLV 127 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 + G + GY A I G + ++ MA ++T+ + NL +S P + Sbjct: 128 DGNGNLIQGYQADANG-VIDYGGMTDIVIDSDSTMAPRSTSEVTFNGNLKASAP---IYD 183 Query: 170 FSASNADSYNKKGSVTV----FDSQGNAHDMSVYFVKTGDNNWQV---YTQDSSDPNSIA 222 + + + G VTV DS G+ + V F KT N+W YT +I Sbjct: 184 ATNATTQAATADGRVTVDYSVKDSLGSDIPLKVTFTKTASNSWDTTISYTDTLGATQTI- 242 Query: 223 KTATTLEFNANGTLVDGAM---------ANNIATGAINGAEPATFSLSF--LNSMQQNTG 271 T L F+++G L + NNI GA++ P + F + +T Sbjct: 243 -TGPALSFSSDGKLDPATVTTLANINLPVNNINPGAVS---PQAIDIDFAQITQFDSSTS 298 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 AN T NG G L S+ I+ G + G YSN + Q + Q+V+A F+N GL S+G N Sbjct: 299 AN---INTINGNSEGYLESFTISSSGEINGIYSNGEVQAISQLVMATFSNAGGLLSQGGN 355 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 ++A+ +SG+ G A G G + +G+LE SNVDLS+E MI AQR++Q+N + I T Sbjct: 356 TFTASNNSGLPNYGIANEGR-GAIQSGSLEMSNVDLSEEFTEMITAQRSFQANTRIITTS 414 Query: 392 DQILNTLVNLR 402 D+IL LVNL+ Sbjct: 415 DEILQELVNLK 425 >UniRef50_A8MHE5 Putative uncharacterized protein n=2 Tax=Alkaliphilus RepID=A8MHE5_ALKOO Length = 448 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 141/448 (31%), Positives = 218/448 (48%), Gaps = 59/448 (13%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------------K 47 AVS L A +DVIGNNIAN T GFK +F ++F+ + + Sbjct: 8 AVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVTFQEVFSQTLRGAGRAQEGGRGGTNPQQ 67 Query: 48 VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDEN 105 VGLG+ V + T G+ +TG D+ I+ GFF + D+ G + Y+R G F LD N Sbjct: 68 VGLGINVNSMDTFHTRGSVESTGYNTDLMINGEGFFVVSDTQGGLQKSYTRAGAFGLDAN 127 Query: 106 RNLVNMQGLQLTGYPATGTP-----------PTIQQGANPTNISIPNTLMAAKTTT---T 151 NL+ G + GY A P ++ IS T A TT T Sbjct: 128 GNLITPDGYYVLGYTAVRDADGQVQKNEKGQPIFEENLTGLRISRDETAPPAATTKATFT 187 Query: 152 ASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT--GDNNWQ 209 ++ NL++ + + D + + V DS GNAH + V F +T G++ + Sbjct: 188 GNIDSNLSADS--------TGTAGDGGIHETVMKVHDSLGNAHTVKVQFQRTDQGNDTKR 239 Query: 210 VYTQDSSDPNSIA-------KTATTLEFNANG-----TLVDGAMANNIATGAINGAEPAT 257 + ++ +++ + AT L F++ G L G + AT ++GA+ + Sbjct: 240 TFAVTITELDNVKLGAPIPLEPATPLTFDSAGILDKTALTKGTLKLGHATDGLDGAKQLS 299 Query: 258 FSLSF--LNSMQQNTGANNIVATTQ-NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 L F L S + GA + A + NGY G + + I+ G + N++N Q+LG++ Sbjct: 300 IELDFTKLTSYAADKGAKSDAAALEINGYASGKIDDFTISTTGEIEANFTNGSRQILGRV 359 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 LANF N GL G N++ T +SG + G AGTG FG L GA+E SNVD+S+E +M Sbjct: 360 GLANFKNPAGLLKTGGNMYRETSNSGEVMFGYAGTGGFGALNPGAIEMSNVDISREFTDM 419 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNLR 402 I QR +Q+N++ I T D++L +VN++ Sbjct: 420 ITTQRGFQANSRIITTSDEMLQEIVNMK 447 >UniRef50_B0THB1 Flagellar hook protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THB1_HELMI Length = 442 Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 147/447 (32%), Positives = 207/447 (46%), Gaps = 65/447 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGS-----------KVG 49 V+ L T +D IGNNIAN T GFK +FAD A S +VG Sbjct: 9 VTALRNHQTRMDTIGNNIANVNTIGFKKSRVTFADALNQTIRGASSPQGGRGGTNPMQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG+ +A + FT + TG+ D+AI +GFF L+D G+ +Y+R G F LD N + Sbjct: 69 LGMNIATMETVFTPASVQGTGKNSDLAIEGDGFF-LLDDGGARYYTRAGNFDLDTEYNFI 127 Query: 110 NMQ-GLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDPLPTV 167 G+++ GY A T I +P I+I + L M A T NL S Sbjct: 128 RTDNGMKVMGYIADATGE-IDANGDPVPINIKDKLQMTASATNRVEFNKNLYSL------ 180 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV----KTGDNNWQVYTQ-DSSDPNSIA 222 A + + S+ ++DS+G H++ + F T N WQV + + DP S Sbjct: 181 ------QASAKPIQKSIEIYDSRGGKHNLVLTFKNVSNATTPNTWQVSARITTEDPQSKK 234 Query: 223 KTAT------TLEFNANGTL-----------------VD--GAMANNIATGA--INGAEP 255 T T+ F+ NG VD GAM N T I + Sbjct: 235 ITTANGYIIGTMLFSTNGLFKSFQVSDSVDFKFPGLGVDDIGAMPNGTYTAKFEIPDVKK 294 Query: 256 ATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 T L+++ Q I +QNGY GDL SY I+ G + G YSN Q + + Q+ Sbjct: 295 DTKLYLDLHAITQFNSETTIDKLSQNGYADGDLKSYAIDAAGVLTGTYSNGQNRKMAQVA 354 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 + F+N GL G N+++ T +SG G G G +T GALE SNVDLS+E +MI Sbjct: 355 VTTFSNPAGLFKAGSNLYTRTNNSGEPKTGQPAVGGRGAITPGALEMSNVDLSQEFTDMI 414 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 QR +Q+N++ I D +L LVNL+ Sbjct: 415 TTQRGFQANSRIISVSDSMLEELVNLK 441 >UniRef50_A1HN32 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN32_9FIRM Length = 420 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 142/433 (32%), Positives = 204/433 (47%), Gaps = 59/433 (13%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL T +DVIGNNIAN T GFK+ +F D+ + + ++G Sbjct: 9 VSGLRNHQTRMDVIGNNIANVNTIGFKASRVNFQDILSQTMQGASSGIGNQGGTNPIQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRN- 107 LGV +A I FTDG+ TG+ D++I GFF L G ++R G F D N Sbjct: 69 LGVSIASIDTIFTDGSFQPTGKQTDLSIQGKGFFVLSPDGGKTEVFTRAGNFDFDRLGNF 128 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPT 166 +V G ++ G+ A + T I IP T M A+ T + NL Sbjct: 129 IVPGTGYKVVGWKADSNGNIDTDPSKRTTIDIPVGTQMPAQATKAITFANNL-------- 180 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT 226 SA A+ K S ++D+ G + + V F KTGD W D + N+ T Sbjct: 181 ----SADAANGTTVKVSYDIYDNLGKRYTLPVVFTKTGDTTW-----DYTISNTSEYTVA 231 Query: 227 TLEFNANGTLVDGAMANNIATGA-------------INGAEPAT----FSLSFLNSMQQN 269 TL T V G + + ATG I+ PA L F + + Q Sbjct: 232 TLP----ATSVTGRLTFDAATGKLSSTTPPTVTTIDISYTTPAQKVSGIQLKF-DQVTQY 286 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 G + Q+GY PG L I+ +G +VG +SN +T+ L Q+ LA F N GL G Sbjct: 287 GGDTTLQIVDQDGYPPGSLEGVTIDPNGVIVGRFSNGKTRNLAQVALATFNNPAGLTKIG 346 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 D++++ + +SG +G G+G G L G LE SNVDL++E NMI+ QR +Q+N++ I Sbjct: 347 DSLYAVSSNSGTPEIGVTGSGGRGKLNPGTLEMSNVDLAQEFSNMIITQRGFQANSKIIS 406 Query: 390 TQDQILNTLVNLR 402 D++L L NL+ Sbjct: 407 VTDEMLQELANLK 419 >UniRef50_Q6MHY9 FlgE protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHY9_BDEBA Length = 427 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 132/431 (30%), Positives = 203/431 (47%), Gaps = 50/431 (11%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVKVAGIT 58 VSG+ A L VIG+NIAN+ T GFK+ A F D+ + G+++G GVK+ + Sbjct: 11 VSGMTAQGEALGVIGDNIANANTIGFKASRAEFQDIISKNLKGIVGGNQIGRGVKIGAVN 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTG 118 + G T + D+AIS +G+F++ S+G Y+R+G F D LV ++ G Sbjct: 71 PILSQGNIDATEKVTDLAISGDGYFKVKGSDGES-YTRDGSFHFDREGYLVTNDNQRVQG 129 Query: 119 YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS-DPLPTVTPFSASNADS 177 + + + T+I P L+ AK T + +NL+S +P P + Sbjct: 130 FSTDEKGNIVNK---MTDIKFPRALIPAKATKELKLDLNLDSRMEPTKKFDPADPYSTSH 186 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ--------------------------VY 211 Y+ V ++DSQGN H +S +F K D W+ ++ Sbjct: 187 YST--GVEMYDSQGNKHLVSFFFNKVNDREWEFKGLVDGKEITGGEEGKMSEVAAGKLMF 244 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 T D +S T+T F G L D + N +G + L+ +Q Sbjct: 245 TVDGK-LDSQETTSTNFNFKG-GALQDQQVKLNFGDAIKDGGKG-------LDGTKQYGK 295 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 +++++ Q+G G + ND+GT+ YSN Q L QI LA F N E L G+N Sbjct: 296 NSDLISWHQDGAAAGTITGLSFNDEGTLTAVYSNGQANDLAQIALAKFENPEALFKVGNN 355 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 ++ SG A +G G G L +LE S VDL+ E VNMI QR +Q+NA+TI T Sbjct: 356 RLKESRDSGTASVGAPGAAGRGKLFAKSLERSTVDLATEFVNMIQNQRGFQANAKTITTT 415 Query: 392 DQILNTLVNLR 402 D++LN ++ L+ Sbjct: 416 DELLNEVIQLK 426 >UniRef50_D1NM00 Fagellar hook-basal body protein n=5 Tax=Clostridium RepID=D1NM00_CLOTM Length = 440 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 144/435 (33%), Positives = 219/435 (50%), Gaps = 43/435 (9%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------------K 47 VSGL A T +DVIGNN+AN T GFKS +F ++F+ + + Sbjct: 9 VSGLQAHQTKMDVIGNNVANVNTVGFKSSRVTFQEVFSQTLKGASSPDPTTGRGGTNPMQ 68 Query: 48 VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLDENR 106 VGLG+ VA I T G+ T D+AI +GFF + + F ++R G F +D Sbjct: 69 VGLGLGVATIDTLMTRGSVQRTDNPTDLAIEGDGFFIVKGGSSDTFKFTRAGNFGIDRLG 128 Query: 107 NLVNMQGLQLTGYPATGTPPT------IQQGANPTNISIPNT-----LMAAKTTTTASMQ 155 NLV GL + G+ + P + P N+ + ++AAK TT A + Sbjct: 129 NLVTGSGLNVYGWQSYTKLPDGTYKFDTESQIEPINLYSDDVNKNKRMIAAKATTYAIFE 188 Query: 156 INLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----GDNNWQVY 211 NL++S + + S+ + + VTV+DS GN++ +++ F KT G W + Sbjct: 189 GNLDASYSIYSSAASGTSSNNRFTMP--VTVYDSLGNSYKINISFWKTDVTGGVTTW-TW 245 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMAN---NIATGAINGAEPATFSLSFLNSMQQ 268 DS + + + T+ F+ G +++ + I + G++ L F + + Sbjct: 246 QVDSGNGVTASGATGTILFDDQGQVIESSAVTPSITIIPDSSVGSQNINVKLDF-SRLTM 304 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 ++ AT +GY G LV++ I DG ++G YSN Q Q LG I LA+F N GL Sbjct: 305 YAADSSAKATNVDGYPAGSLVTFSIGSDGMIMGIYSNGQQQPLGLIALASFDNPAGLEKV 364 Query: 329 GDNVWSATQSSGVALLGT-AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 G+N++ T +SG G AGT GTL+ G LE SNVDLSKE MI+ QR +Q+N++ Sbjct: 365 GENMYIPTSNSGEFKKGVKAGTEGVGTLSPGTLEMSNVDLSKEFTEMIITQRGFQANSRI 424 Query: 388 IKTQDQILNTLVNLR 402 I T D++L LVNL+ Sbjct: 425 ITTSDEMLQELVNLK 439 >UniRef50_Q9X5Y0 Flagellar hook protein flgE n=2 Tax=Rhizobiaceae RepID=FLGE_RHIME Length = 406 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 138/409 (33%), Positives = 201/409 (49%), Gaps = 27/409 (6%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSKVGLGVKVAGITQDFT 62 VSG+NA + L + NIAN+ T G+K + F+ M GS GV+ Sbjct: 11 VSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSGGVQTEVRYSISQ 70 Query: 63 DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP-A 121 G TT T D+AI GFF + +NG + +R G F D NLVN G L GY Sbjct: 71 QGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNASGFTLMGYEYE 130 Query: 122 TGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 G PT+ T +++ + + A +T SM NL S P+ V+ Sbjct: 131 AGVDPTVVVNGFDGLTRVNLASDGLIAAGSTKGSMGANLPSGAPVGDVS----------- 179 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 S+ V+DSQGN + + KTG N W + D + +++ TL FNA G L Sbjct: 180 -TTSLVVYDSQGNTRILDFNYEKTGANAWTLEIVDRASGDALTVPPVTLAFNAAGELTT- 237 Query: 240 AMANNIATGAINGAEPAT------FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 + A +A GA+ PAT ++ F + Q A N + +G P + YQI Sbjct: 238 SPATVVANGALIVPPPATGAVVGSITIDFSKTTQLGY-AFNADGGSIDGNAPSKVAGYQI 296 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 + DG V Y N + +I LAN + + L E NV+S SGV + G AG+G+FG Sbjct: 297 DSDGIVYVKYENGKLDPRYRIALANVQSPDKLRPESGNVYSQGVDSGVIITGFAGSGDFG 356 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +GALE+SNVD+++EL MI +QRNY +N++ +T ++L LVNL+ Sbjct: 357 EILSGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLK 405 >UniRef50_Q44767 Flagellar hook protein flgE n=26 Tax=Spirochaetales RepID=FLGE_BORBU Length = 442 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 148/453 (32%), Positives = 219/453 (48%), Gaps = 77/453 (16%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL T +DV+GNNIAN T GFK G +F DM + S +VG Sbjct: 9 VSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARGGTNPKQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG+ VA I T G +T + D+ +S NGFF L + ++FY+R G F +D +R+LV Sbjct: 69 LGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGK-NLFYTRAGAFDVDSDRHLV 127 Query: 110 N-MQGLQLTGYPATGTP--PTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLP 165 N G+++ G+ A I ++ ++ IP AK+T + NL+ PL Sbjct: 128 NPANGMRIQGWMARDLEGEKVINTASDIEDLIIPIGDKEGAKSTKNVTFACNLDKRLPL- 186 Query: 166 TVTPFSASNADSYNKKGSV--TVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 A+ AD V +++DS GN + + VK D + PN Sbjct: 187 --IQEGANPADIARGTWVVNKSLYDSFGNVSVLELRVVK-----------DLNTPN--LW 231 Query: 224 TATTL---EFNANGTLVDGAMANNIATGAINGAE---------PATFSL----------- 260 AT L E N+N TL N A ++NG P TF++ Sbjct: 232 NATVLINGEQNSNFTL---GFDNEGALASLNGQPGQKGDILQIPITFNVLGANVGEVGEQ 288 Query: 261 -----------SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 S+ +S+ Q +++ A Q+GY G + +Y+I+ +G +VG YSN + Sbjct: 289 QTVNLKLGTVGSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRR 348 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 LG+I LA+F N GLA GD + T +SG +G G G + +G LE +NVDL++ Sbjct: 349 DLGKIALASFMNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAE 408 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +MIV QR +Q+NA+TI T DQ+L LV L+ Sbjct: 409 QFTDMIVTQRGFQANAKTITTSDQLLQELVRLK 441 >UniRef50_Q0EZL8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZL8_9PROT Length = 467 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 151/465 (32%), Positives = 224/465 (48%), Gaps = 68/465 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSK-VGLGV 52 A SGL + + V+G+NIAN + GFKS + SF D+ + GS+ VG GV Sbjct: 6 ALFSGASGLTSFGEAVRVVGDNIANVNSIGFKSQSVSFTDVLSQTIGVSSTGSQQVGNGV 65 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-SNGSVFYSRNGQFKLDENRNLVNM 111 K+ I+++ G+ NT D+AI+ NG F L D + YSR G F+LD+N NL++ Sbjct: 66 KIGTISRNQMQGSIQNTSSATDMAINGNGLFALRDPATNQTSYSRAGSFQLDKNFNLIDG 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP-LPTVTPF 170 G + GY P + + + T++S N AK+T + + L+S+ P LPT T F Sbjct: 126 GGNIVQGYAID--PLSGKAIGSATDLSFGNLAAQAKSTANVTSSLTLDSTAPVLPTGTVF 183 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSSDPNSI---- 221 + ++ +++ K VTVFD+ G H +S F + G+N W +T S D I Sbjct: 184 NPADPATFHFKSDVTVFDALGATHVVSQQFTRMGQDAAGNNVWDYHT--SVDGKEIVGGT 241 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAI----------NGAEPATF----------SLS 261 A T T + T+ G I T + A PATF +L+ Sbjct: 242 AGTPTEVGAPTASTVSAGGTVTAIGTQTLVFGPAGELVQENAPPATFNWSGSAASTITLN 301 Query: 262 FLNSMQQNT------------------------GANNIVATTQNGYKPGDLVSYQINDDG 297 F N+ Q T GA +++GY G L + + G Sbjct: 302 FGNAAGQGTLYPVATADSQGITGTGLDATVQMAGAFATRQVSKDGYAAGFLDTLTTDSSG 361 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 TV G ++N Q + L Q+ LA F N+ L G N+ T SG +L G G GT+T Sbjct: 362 TVSGTFTNGQRRALFQVALAKFPNDAVLNHVGGNLMQETIQSGSPVLEKPGNGGMGTITP 421 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDL+ E V +IV QR Y++N++TI T DQ+L++L+ L+ Sbjct: 422 YGLEQSNVDLAAEFVKLIVVQRGYEANSKTILTTDQMLSSLMQLK 466 >UniRef50_B6R7Z8 Flagellar hook protein FlgE n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7Z8_9RHOB Length = 397 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 134/413 (32%), Positives = 209/413 (50%), Gaps = 41/413 (9%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGSKVGLGVKVAGITQD 60 +VSG+NA + L + +NI+N+ T G+K +F+ + +G + G+ V + Sbjct: 10 SVSGMNAQSNKLSTVADNISNANTVGYKRYKTAFSSLVGSGGTSGHESGI-VNTTVVQTV 68 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 G T RG D+AI+ GFF++ DS GS +Y+R G F LD+N +VN G +L Sbjct: 69 RQQGAFNFTSRGTDLAINGKGFFQVQDSQGSTYYTRAGDFVLDKNGQMVNSGGYKL--LS 126 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 A G P T+ +++ P + ++ + +NL SS P+ T P N ++ Sbjct: 127 AGGAPVTV-------DLNTP----VWQASSEGELGVNLASSTPVRTGAPSYPGN---FDY 172 Query: 181 KGSVTVFDSQGNAHDMSVYFVKTG---------DNNWQV--YTQDSSDPNSIAKTATTLE 229 K SV+ +D GN + + + K G D+ W+V Y QD+ P +A L Sbjct: 173 KTSVSAYDQNGNVVKIDLVYSKIGQNMTGSTVDDSTWKVQAYNQDTP-PVELANV--DLV 229 Query: 230 FNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 F+ +GTL G+ + +A NG E T LS + N + +GY P + Sbjct: 230 FDGDGTLQTGS-PDELAFTVPNG-ETLTLDLSKTVTAGDKFSVNKVDV---DGYGPSTIK 284 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 + +I DG V G Y +LL QI + NF+N +GL ++ NV++AT +SG +G G Sbjct: 285 TIRIEADGRVFGVYEGSAEKLLDQIQIVNFSNPDGLQAKSGNVYAATDASGDPAVGFPGD 344 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+L +GA+E SNVDL+ EL M+ AQR Y +N + ++L L NLR Sbjct: 345 NGFGSLYSGAVEGSNVDLAAELTEMVQAQRTYSANTKVFNASSELLQELNNLR 397 >UniRef50_B9L4C8 Flagellar hook protein FlgE n=3 Tax=Bacteria RepID=B9L4C8_THERP Length = 423 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 147/431 (34%), Positives = 209/431 (48%), Gaps = 50/431 (11%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKV 48 A+SGL A T +DVIGNNIAN T GFK G F D+ + ++ Sbjct: 8 AISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRFTDILSQLVRGASGPTETRGGINPLQI 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRN 107 GLG V + T G TG+ D+AI +GFF V S+GS Y+R+G F + + Sbjct: 68 GLGAVVGAVDTIHTQGALQLTGKPSDLAIQGDGFF--VVSDGSQTLYTRDGAFDIGSDLR 125 Query: 108 LVNMQ-GLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 LVN G + G+ A G P I I L A TT ++Q NLN++ P Sbjct: 126 LVNPSNGFYVLGWQADANGNVDTAGPVGPITIPIGQQLDAVPTTQI-TVQGNLNANQD-P 183 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA 225 TP + V++ DS G H+ + F K G N W YT DP + + T Sbjct: 184 AATPHFVTK---------VSITDSLGKRHEFYILFDKVGTNTWN-YTLQEDDPRTTSTTE 233 Query: 226 TTLEF----NANGTLV---DGAM---ANNIATGAIN----GAEPATFSLSFLNSMQQNTG 271 +F +GTLV DG + A+NI+ ++ GA T + F Q Sbjct: 234 DDPDFALGGTPSGTLVFDADGNLDLAASNISAVDLDSTAGGASSITVTPDFSRLTQLAAP 293 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 + A L ++ ++ G V+G YSN T+++GQI LA F N GL G N Sbjct: 294 YSANAAANGAPAG--SLTTFTVSQSGQVLGIYSNGVTKVVGQIALALFTNPGGLMKVGGN 351 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + T +SG ++G A +G G + +G LE SNVDL++E +MI+AQR +Q+N++ I T Sbjct: 352 AYLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDLAQEFTSMIMAQRGFQANSRVITTS 411 Query: 392 DQILNTLVNLR 402 D++L LVNLR Sbjct: 412 DEVLQELVNLR 422 >UniRef50_Q1YLP3 Putative flagellar hook protein FlgE n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLP3_MOBAS Length = 388 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 140/411 (34%), Positives = 203/411 (49%), Gaps = 41/411 (9%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF---AGSKVGLGVKVAGITQ 59 F +VSG+NA A L + NIANS+T G+K + FA + G + G + Q Sbjct: 7 FRTSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLAQGGGEYNPGSVKTQVRQ 66 Query: 60 DFTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL-------DENRNLVNM 111 + G+ T G D+AI +GFF + D+ G FY+R G F E LVN Sbjct: 67 SISQQGSIAATSSGSDLAIQGDGFFVVQDTAGREFYTRAGSFVQRTETIGGKETTFLVNT 126 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G +LTG P G A P + + ++A K T + I P S Sbjct: 127 AGYRLTGSPVGG------GAAAPIELPV-GAIVAPKATDAGAFTIQF----------PES 169 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 A+ D+ KK S+ V+DS G A ++ V KT N W V DS P + TT+ F+ Sbjct: 170 AAVGDT--KKSSMVVYDSIGKAIEVPVDMEKTAANTWTVSYTDSGGPQT-----TTIVFD 222 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 N A AN T +NG T + F + + T ++ + T NG PG + Sbjct: 223 PNTGRPTAAPANMTYT-HVNGD---TVDIEFGSLTEYATDFSSKLVT--NGNPPGSFTGF 276 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 ++GT+ G + Q L ++ LA FA+ + L + NV+SAT SSGVA LG GT Sbjct: 277 AFAENGTLSGVMNTGQLIPLYEMSLARFASPDQLQASAGNVYSATASSGVAALGGPGTNG 336 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G+L + LE SNVDL+ EL +MI +QR+Y +N++ +T +IL+ LVNL+ Sbjct: 337 YGSLVSSGLEQSNVDLASELTSMIESQRSYSANSKVFQTGAEILDVLVNLK 387 >UniRef50_Q7WA94 Flagellar hook protein FlgE n=3 Tax=Bordetella RepID=Q7WA94_BORPA Length = 473 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 91/161 (56%), Positives = 113/161 (70%), Gaps = 7/161 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q +SGLNAA+ NLDVIGNNIANS T GFKSG ASFAD++A S+VGLGVKV+ I Q Sbjct: 1 MGFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYASSRVGLGVKVSAINQR 60 Query: 61 FTDGTTTNTGRGLDVAI-SQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 FT G + TG D+AI GFFRL D +G VFYSRNG+F +D+N +VN QG +LTGY Sbjct: 61 FTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFRLTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS 160 PA G GA P ++ +P +A + T+TA +Q NLN+ Sbjct: 121 PAGGV------GAQPVDLQLPQGNIAPQATSTAGLQTNLNA 155 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 100/249 (40%), Positives = 141/249 (56%), Gaps = 11/249 (4%) Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDSSDP 218 PL PF +N SY + TV+DS GN+H M YF K ++ ++VY P Sbjct: 227 PLVAGIPFDPTNPLSYTDQVPTTVYDSLGNSHQMIQYFAKRPAVGTESVYEVYYVLDGQP 286 Query: 219 NSIAKTAT-TLEFNANGTLVDGAMANNIATGAING----AEPATFSLSFLNSMQQNTGAN 273 + A+ TL F+ G L++ + G A+P ++S+ N + Q G++ Sbjct: 287 MQVNGGASQTLNFDTAGNLLNQPPTAQVTFANPGGNAAPADPLAITVSY-NGVTQ-YGSD 344 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 QNGY G+ + + DG++V Y+N +TQ +G +VLANF N +GL G+N W Sbjct: 345 FAPKVVQNGYSSGEFMGLSVGKDGSLVAKYTNGETQTIGTLVLANFNNVQGLQPVGNNAW 404 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 T SG A LG GT T+ ALEASNVD+S+ELVNMIVAQR YQ+NAQTIKTQD+ Sbjct: 405 VETSESGQATLGQPGTNGLATIAGQALEASNVDMSRELVNMIVAQRTYQANAQTIKTQDE 464 Query: 394 ILNTLVNLR 402 ++ L+N+R Sbjct: 465 VMQVLMNMR 473 >UniRef50_Q04UG8 Endoflagellar hook protein n=7 Tax=Spirochaetales RepID=Q04UG8_LEPBJ Length = 464 Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 151/460 (32%), Positives = 222/460 (48%), Gaps = 69/460 (15%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL +DVIGNNI+N T+GFK+ +F DM + +VG Sbjct: 9 VSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIGGVNPQQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG +A I + T G+ TG+ DVA+S GFF + D + FY+R G F LD+N V Sbjct: 69 LGSLIAAIDKIMTQGSLQTTGKNTDVAMSGEGFFIVKDGDKQ-FYTRAGAFNLDKNGYYV 127 Query: 110 N-MQGLQLTGYPATGTPP---TIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPL 164 N GL++ G+ A I A+ +I IP + A+ T+ + NLNSS Sbjct: 128 NPANGLKVQGWNARLDDKGNKFINSSASIEDIIIPVYSKEPARATSQIDFKSNLNSS--A 185 Query: 165 PTVTPFSAS--------NADSYNKKGSVTV---FDSQGNAHDMSVYFVKTGDNNWQVY-- 211 P V P + + D ++G VT FD QG + + F K DN W+ Sbjct: 186 PAVPPDATQEEITAMINDPDPKMRRGHVTTIKTFDDQGIQREFKMEFYKVRDNTWKARLS 245 Query: 212 ----TQDSSD------PNSIAKTATTLEF--NANGTLV---DGAMANNIATGAING---- 252 TQ S+D N+ T LEF +G LV DG +++ +G +N Sbjct: 246 MTDATQLSADVSGTGGQNTQLPGNTELEFGFTPDGKLVYVSDGV--DSMNSGKLNAKVSF 303 Query: 253 ---AEPA--TFSLSF-----LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 PA +F L+ ++ + Q + A Q+GY G L S+ I++ GT+ G Sbjct: 304 RIAGNPAVQSFDLNLGEAGMVDGITQFSSDFTTKAVKQDGYTMGYLESFSIDNSGTITGV 363 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 +SN Q L +I A F N GL GD +++ + +SG +G AG G + G LE Sbjct: 364 FSNGVRQPLARIATAVFNNPAGLDKAGDTMFAYSMNSGEPNIGEAGVQGRGKINAGLLEM 423 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS + +MIV QR +Q+N++TI T DQ++ ++ L+ Sbjct: 424 SNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQEVLGLK 463 >UniRef50_B6AMB9 Probable flagellar hook protein FlgE n=2 Tax=Leptospirillum sp. Group II RepID=B6AMB9_9BACT Length = 457 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 138/460 (30%), Positives = 214/460 (46%), Gaps = 82/460 (17%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------SKVGLGVKV 54 A SGLNA T++ VIGNNI N T GFK G A FA+++ S+ G GV V Sbjct: 10 ATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQPGSGVYV 69 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 I Q+FT G+ + LD+AI NGF + +G FY+RNG+ LD+ +V+ Sbjct: 70 DAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRIVDTSNR 129 Query: 115 QLTGY--PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS--SDPLPTVTPF 170 L GY P + ++I +P T + K T +INL++ ++ L F Sbjct: 130 ALQGYMNKNGKIQPIL------SDIRVPQTTVPPKATQNVFSRINLDAGMTEKLKEGREF 183 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT---GDNNWQVYTQDSS----------- 216 S+ +FDS G H ++ F+ T G +Q +S Sbjct: 184 EKSS----------NIFDSLGIQHLLTYKFIPTSVAGQWAFQATMDGASLTKGGGSISYP 233 Query: 217 -----DPNSIAKTATTLEFNANGTL----VDGAMANNIATGAIN----------GAEPAT 257 P ++ ++F+ NG + G+ A G ++ A P + Sbjct: 234 PLGRKTPKTLKGIVGLIQFDGNGIVKSVNYGGSPLKRDANGVVHALYQTTLADKAATPVS 293 Query: 258 FSLSF-----------LNSMQQNT-------GANNIVATTQNGYKPGDLVSYQINDDGTV 299 F + +N + Q ++ + TQ+G+K GDL + I+ DG + Sbjct: 294 FDVVIPTKGQTIRPNRINGVTQQVLQLTQFNAPSSTIEETQDGHKSGDLNNLAISRDGKI 353 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 VG++SN ++LG + +A+F N GLAS G N + + +SGV G G G G L + + Sbjct: 354 VGSFSNGVQKVLGVVSIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNS 413 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 LE S DL +++V+MI A+R YQ++A I T + ILNTL+ Sbjct: 414 LELSTTDLGRQMVDMITAERGYQASASIIATDNTILNTLL 453 >UniRef50_B9JZL6 Flagellar hook protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JZL6_AGRVS Length = 411 Score = 167 bits (422), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 129/414 (31%), Positives = 204/414 (49%), Gaps = 24/414 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + +VSGL A + L IG+NI+N++T G+K +F+ + G G Sbjct: 6 AMNSSVSGLTAQSNKLTSIGDNISNTSTTGYKGTETAFSSLVNG-----GTTSTTTQTVS 60 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPA 121 G +T D+AI +G+F + D G VF +R G F++DE+ LVN G L GY Sbjct: 61 QSGDLESTSSETDLAIDGDGYFVVQDDEGDVFLTRQGDFEIDEDGYLVNSSGYTLLGYSY 120 Query: 122 T-GTPPTIQQGANPTN-ISIPNTLMAAKTTTTASMQINLNSSDPLPT-VTPFSASNADSY 178 G P ++ G + + I + + A TTT + NL S + + + TP S S ++ Sbjct: 121 DNGEPASVINGFDGLEPVKIDTSEVTASATTTGEVSGNLESDEEVVSGDTPSSNSADATF 180 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV--YTQDSSDPNSIAKT---------ATT 227 K S+ +D QG + +YF KT D+ W+V Y D ++ + + +TT Sbjct: 181 TAKSSIVTYDEQGASTQYDIYFTKTDDDEWEVSIYRNDEANDDDDGTSFPYDNGELGSTT 240 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 L F++ G L DG+ + T + G T L F + Q T + + + NG Sbjct: 241 LTFDSAGELEDGSTSTLSFTDSETGL---TIDLDFSDITQ--TATSTSIEGSANGSAASS 295 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Y I DG + S+ T +I LA A+ + L G + SG ++G A Sbjct: 296 SSDYTIGSDGVISTVSSDGTTTDTYKIALATVASPDNLEEVGGTAYKVDADSGTVVVGFA 355 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 GTG+FGT+ + LE+SNVDL+ EL +MI AQR Y +N++ +T +L+T++N+ Sbjct: 356 GTGSFGTIESSTLESSNVDLASELSDMIAAQRAYSANSKVFQTAADMLDTVINM 409 >UniRef50_C7LUH2 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUH2_DESBD Length = 513 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 157/511 (30%), Positives = 236/511 (46%), Gaps = 126/511 (24%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA---GS-----KVGLGVKVAGITQ 59 +G+ A N+ VI +NIAN +T GFKS F + + GS +VG GV V+ I Sbjct: 12 TGIMAQQKNMAVISDNIANVSTVGFKSSHMIFNTLMSQQMGSASVSNQVGQGVGVSSILY 71 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRNLVNMQGLQLT 117 D + G T D++IS GFF +V NGS Y+R G F+ D L + QG L Sbjct: 72 DMSLGALEPTNTATDISISGKGFF-IVSPNGSSDQHYTRAGNFRFDAEGYLRDPQGNILQ 130 Query: 118 GY---------------PATGTPPT-----IQQGANPTNISIPNTLMAAKTTTTASMQIN 157 GY PA P T +Q G P +S P + TT M IN Sbjct: 131 GYRMPAESILDTAPVIPPAASAPITDIRLDMQDGGGP--VSEP------EATTEMRMMIN 182 Query: 158 LNSSD---PLPTVTPFSAS------------NADSYNKKGSVTVFDSQGNAHDMSVYF-- 200 L+SS T +PF+A +A +Y+ + ++ ++DS G AH++ YF Sbjct: 183 LDSSSQERSTSTTSPFTALFDSWDATQPEPLDAGAYSYQSAMKIYDSDGGAHEVRAYFDP 242 Query: 201 ------VKTGDNNWQVY-----TQDSS--DPNSIAKTATTLEFNANGTLV-----DGAMA 242 V +G+ W+ TQD+S D TL F A+G L+ +G+ Sbjct: 243 VQDGASVPSGNRMWEFLVTIPPTQDASGLDTKKGVLMTGTLTFTASGELLNMSAFEGSSD 302 Query: 243 NNIATGAIN--------------GAEPATFSL--------------------------SF 262 + + +N GAEP + +L S Sbjct: 303 DKNSWVPVNLSEDGYPVLNVNLVGAEPISSALDMGLRSNSGWALPAGVNTLADLGTAISD 362 Query: 263 LNSMQQ-----------NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 L S+Q N+G++ + +QNGY+ G L S ++ G +VG +SN Q Q L Sbjct: 363 LPSLQNADRQILSITNFNSGSSTLY-QSQNGYERGFLQSVSVDTAGVLVGYFSNGQNQGL 421 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 +I +A+F N +GL EG N++SAT+ SG +G AG G G++ +LE SNVDL+ E Sbjct: 422 YKIPMADFINPQGLFREGGNLFSATKDSGAVSVGWAGEGRLGSVITSSLENSNVDLATEF 481 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 VNMI+ Q+ + +N++ I T DQ++ T + ++ Sbjct: 482 VNMIITQKGFDANSKVITTGDQVVQTAIQMK 512 >UniRef50_C9LSP4 Flagellar hook protein FlgE n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSP4_9FIRM Length = 496 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 147/492 (29%), Positives = 220/492 (44%), Gaps = 101/492 (20%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-----------------VG 49 VSGL + T +DVIGNNIAN T GFKS +FAD ++ +G Sbjct: 9 VSGLKSHQTRMDVIGNNIANVNTIGFKSSRVTFADTLYQTQSGAAAPTGTVGGTNPKQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRN 107 LGV VA + Q F D + TG+ D+A+S NG F + G +Y+R G F D N N Sbjct: 69 LGVGVASVDQLFGDASPQATGKNTDLALSGNGLFVVSRDAGGKDKYYTRAGNFSFDANYN 128 Query: 108 -LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL--MAAKTTTTASMQINLNSSDPL 164 +V G + G+ A +I PT I I + + M AK TTT S + N+NSS + Sbjct: 129 YVVPGSGYHVVGWNADENG-SIDTKGTPTGIQIKDAMRSMGAKATTTISYKGNMNSS--V 185 Query: 165 PTVTPF---------SASNAD-------------------------SYNKKGSVT----- 185 PT+T S + D Y K S+ Sbjct: 186 PTITSIRNQTGAVVASPAKVDGVTNTSLTLTLSDGTTQTVTAKSNYEYRTKCSMPITTIA 245 Query: 186 -VFDSQGNAHDMSVYFVKTGD--------NNWQV-------------------YTQDSSD 217 V+DS GN H + F K + W+V +D Sbjct: 246 NVYDSLGNLHKVPFLFTKVPGSGTPPLMYDEWEVSLSPATTSGGTLDPVNQCSIKEDDGS 305 Query: 218 PNSIAKTATTLEFNANGTLVDGA------MANNIATGAINGAEPATFSLSF-LNSMQQNT 270 ++ TL+F+ NG V GA + N + + +G AT + + L S+ Q + Sbjct: 306 WTTVKMNKKTLKFDQNGKYVSGAGDPELTLQNGAGSISGSGTPSATMTATVDLKSLTQYS 365 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 G++ I A +G+ G L + G + G Y+N + + L Q+ +A F N GL G Sbjct: 366 GSDTIKAD-YDGHSAGTLKEINTDQSGILTGTYTNGEKRALAQVAVAQFDNAPGLTKAGA 424 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 N+++ + +SG A + T TLT ALE SNVD++ E +M+V QR +QSN++ I Sbjct: 425 NLYTESNNSGTANIKTVSALGL-TLTPSALEMSNVDVANEFADMVVTQRGFQSNSKVITV 483 Query: 391 QDQILNTLVNLR 402 D++L T++N++ Sbjct: 484 GDEMLETVINMK 495 >UniRef50_Q6AGA2 Flagellar hook protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AGA2_LEIXX Length = 390 Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 135/414 (32%), Positives = 199/414 (48%), Gaps = 52/414 (12%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 V GL A T LDV NNIAN T GFK+ + F D + + VG Sbjct: 9 VFGLQAQQTMLDVTANNIANVNTAGFKASSVQFEDALSQVTRTASAPTDVIGGTTPAAVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV+ AGI D+T G T TG+ ++ ++ +GFF ++ S G Y+R G F D++ LV Sbjct: 69 LGVRAAGIDTDWTQGATQTTGKATNLTLNGDGFF-VIRSAGQTQYTRAGNFTTDDSGTLV 127 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVT 168 G ++ G+ A G + G P+ I+IP N A TT+A+ NL S V Sbjct: 128 TPDGARVQGWGAAG--GVVNSGVAPSTITIPLNVQSPAVATTSATATGNLPSDAAAGAVV 185 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 SV V D+ G +++ F +G +W V +++D N A + L Sbjct: 186 ------------SSSVRVHDAAGGERTLTLTFTSSGGGSWSV---NAADANG-ATASGPL 229 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 F A G +A G I+ + M GA + T QNG G L Sbjct: 230 AFTAGARSTGG----TLAVGGIS---------VDMTQMTVYAGATSAGITKQNGSAAGAL 276 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 S+ + DGT+ G++SN +G++ +A F+N G G + ++AT SG+ + A Sbjct: 277 QSFTFDQDGTIEGSFSNGARLAIGRVAVATFSNPSGFQKAGSSAFTATADSGIPQV--AA 334 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GT+T GA E SNVDL +E N+IV+QR +Q++A+ I T D+IL L L+ Sbjct: 335 DSGTGTITVGAYEGSNVDLGREFTNLIVSQRAFQASARVITTSDEILQELTQLK 388 >UniRef50_C6HWM7 Probable flagellar hook protein FlgE n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM7_9BACT Length = 458 Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 146/458 (31%), Positives = 214/458 (46%), Gaps = 81/458 (17%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AG-------SKVGLGVKVAG 56 SGL+A T++ VIGNNI+N T GFK+G A FA+++ AG S+ G GV V Sbjct: 12 SGLSAMGTDMSVIGNNISNMNTNGFKAGRAVFANIYGQTLAGKSNAVGPSQPGSGVYVES 71 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 I FT G+ T LD+AI NGFF + G++ Y RNG LD N +V+ G L Sbjct: 72 IEPLFTQGSVQTTSNALDLAIQGNGFFSFRNRQGAILYGRNGALSLDRNGRIVDQGGHIL 131 Query: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL--NSSDPLPTVTPFSASN 174 GY A + + ++S+P + + K + +INL N ++ L T FS S+ Sbjct: 132 QGYMADARGKILPK---VRDLSVPQSTIPPKASQNVYSRINLDANMTEKLKTGKTFSKSS 188 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQV-----------------YTQDS- 215 +FDS G H ++ F T W V YT S Sbjct: 189 ----------NIFDSLGIEHLLTYKFHPTNQVGVWAVEATLDGATLTKGGGSISYTPASG 238 Query: 216 SDPNSIAKTATTLEFNANGTL-------------VDGAMANNIATGAI--NGAEPATFSL 260 P +I ++ F+ NG + DG + N + T A+ P SL Sbjct: 239 GKPMTIKGMVASVAFDGNGNVETVNYGGSPVSQSSDG-VQNVVYTMALADKAKTPVNLSL 297 Query: 261 SFLNSMQQNTGANN-------------------IVATTQNGYKPGDLVSYQINDDGTVVG 301 F+ Q N+ + TQ+GYK GDL + I+ G +VG Sbjct: 298 -FIPKAGQKVADNSKDGTTQQVLDLTQYAEPSTTIEETQDGYKAGDLSNIAIDRAGRIVG 356 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 ++SN LG I ++ F N GL S G N++ + SG+A +G AG G G + +LE Sbjct: 357 SFSNGTEHNLGAIAVSTFNNPNGLVSVGANLYKESIGSGIANIGRAGQGGRGQVLANSLE 416 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 SNVDL +++++MI A+R YQ+NA I +Q++NTL+ Sbjct: 417 QSNVDLGRQMIDMISAERGYQANASVISADNQLMNTLL 454 >UniRef50_B1XWJ5 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWJ5_LEPCP Length = 501 Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 102/239 (42%), Positives = 139/239 (58%), Gaps = 15/239 (6%) Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-----TQDSSDPNSIAKTATTLEFN 231 SYNK S+T +D +G M+ YF K+ + W +Y T + D + T L+F Sbjct: 265 SYNKATSMTAYDVKGQPVAMTYYFQKSAPDTWNIYATANGTSINVDASGRPVPVTQLQFP 324 Query: 232 ANGTLVDGAMANNI----ATGAINGA--EPAT-FSLSFLNSMQQNTGAN-NIVATTQNGY 283 +G A + T A +G+ EP T S F + Q GA ++ TQNGY Sbjct: 325 TSGAAPISPAAPVVFDVPGTTAADGSTTEPITGVSFDFTQATQY--GATFSVTDLTQNGY 382 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 PG++ S + +G + YSN T+ GQI +ANF N +GL + G N W++T +SG A Sbjct: 383 APGEMSSLNVESNGIITARYSNGLTKSAGQIEVANFRNPQGLQAVGGNAWASTFASGSAT 442 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +GT +GNFG L +G+LE SNVDL+ ELVNMI AQR YQ+NAQTIKTQD +L TLVNL+ Sbjct: 443 VGTPDSGNFGQLQSGSLEDSNVDLTAELVNMITAQRVYQANAQTIKTQDSVLQTLVNLK 501 Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 13/174 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGLNA + NL+VIGNN+AN+ TYG K+ A FADM+A + VG+GV+ Sbjct: 1 MNFQQGLSGLNATSKNLEVIGNNVANANTYGTKASRAEFADMYASTINNIGTGNVGIGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 VA ++Q FT G+ + T LD+AI+ GFF++ D+ G+ Y+RNGQFKLD+ +VN G Sbjct: 61 VAAVSQQFTQGSLSATDNPLDMAINGAGFFQVKDTAGNQLYTRNGQFKLDKEGFIVNNSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS----SDP 163 +L GYPA + A + +P +A T M++NL+S +DP Sbjct: 121 QKLLGYPANADGVVVPGAAGA--LQLPTAGIAPMATDEVKMEMNLDSRGVLTDP 172 >UniRef50_D1TKK3 Putative flagellar hook protein FlgE n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKK3_9BURK Length = 510 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 137/238 (57%), Gaps = 31/238 (13%) Query: 187 FDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANN-- 244 +DS G + +++YF KTG W VY ++ ++ TA FN++GTLV + N Sbjct: 281 YDSLGGSQTVNMYFAKTGSGTWNVYAGPATGTATLIGTA---NFNSSGTLVSTSQVNTPI 337 Query: 245 ------IATGAINGAEPATFSLSFLNSMQQNTGAN---NIVATTQ------------NGY 283 AT + G FSLS + T N N+ ATTQ +GY Sbjct: 338 ANPPTFTATTTLGG-----FSLSIPTTDGSGTPQNITLNLGATTQYGGKNGVNNLSTDGY 392 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L S+ ++ DGT+ GNYSN QT LGQIVLANFAN GL + G+N + T +SGVA Sbjct: 393 AAGQLTSFTVSADGTLTGNYSNGQTAALGQIVLANFANQNGLVNLGNNEYGQTSASGVAQ 452 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + T G+ N G L GA+E SNVDL+ ELVN+I AQRNYQ+NAQTIKTQ + TL+NL Sbjct: 453 ISTPGSTNHGVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLINL 510 Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/164 (45%), Positives = 107/164 (65%), Gaps = 14/164 (8%) Query: 16 NLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKVAGITQDFTDGTTTN 68 +LDVIGNNIAN+ T GFKSGTA FADM+A S ++G+G K++ + Q F+ GT T Sbjct: 16 DLDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTKLSEVQQQFSQGTITT 75 Query: 69 TGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTI 128 T + L+VAI+ NGF++L D NG++ YSRNG F+LD+N + N QGL+L GY A+ I Sbjct: 76 TNQALNVAINGNGFYQLSD-NGTLVYSRNGVFQLDKNGFITNAQGLKLMGYAASSA--GI 132 Query: 129 QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL----PTVT 168 A +++P +A + TT+ + +NLN+ D + P+VT Sbjct: 133 INTAQTVPLTVPTANIAPQATTSITAGLNLNAQDNIMLGAPSVT 176 >UniRef50_Q67K22 Flagellar hook protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K22_SYMTH Length = 418 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 138/425 (32%), Positives = 210/425 (49%), Gaps = 44/425 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGS------KVGLGVKVA 55 VSG+ + T +DVIGNNIAN T GFK+ +F D+F +GS ++GLGV V Sbjct: 8 VSGIRSHQTRMDVIGNNIANVNTTGFKASRVTFTDVFNQTLSSGSALTNPQQIGLGVAV- 66 Query: 56 GITQDFTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN-MQG 113 G T TD G TGR D+AIS G F L +N + YSR G F + + L+N G Sbjct: 67 GSTDLITDEGAFQMTGRAFDLAISGAGLFVLKGANDEILYSRAGMFDWNPDGILINPALG 126 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 +++ G+ A A +I I T+ + TT + + NL+ +A Sbjct: 127 MKVQGWMAVDGVIGRTDRATMQDIQIVRGTVSLPQATTKVTFKGNLD-----------AA 175 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 + DS + + +DS G +++ F K N W V D TL+F + Sbjct: 176 AEEDS-TYETIINAYDSLGRDIPITLRFTKGDGNTWTVQYWDPETEG--WSEEHTLDFGS 232 Query: 233 NGTLV--------DGAMANNIATGAINGAEPATFSLSFLNSMQQ-------NTGANNIVA 277 +G ++ D + T + A+ +L F Q T + + Sbjct: 233 DGRILGPQGPNDDDPRLWTITITDPNDQADDLEITLDFRKITQAYDASGSGGTARSTVEL 292 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 T++G G L + +N+ G ++G Y+N +QLL QI LA+F N GL EG++ ++ + Sbjct: 293 DTRDGRPMGSLEAVYVNELGEIIGRYTNGDSQLLAQIALAHFNNMAGLIKEGNSTFAESP 352 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 +SGV +GTAGTG GTL G LE SNVDL+ + MI+ QR YQ++A+ + T D +L Sbjct: 353 ASGVPQIGTAGTGGRGTLVPGNLEGSNVDLAGQFTEMILTQRGYQASARVVSTADDMLQE 412 Query: 398 LVNLR 402 ++NL+ Sbjct: 413 IINLK 417 >UniRef50_UPI00016C5508 hypothetical protein GobsU_27906 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5508 Length = 430 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 147/435 (33%), Positives = 207/435 (47%), Gaps = 58/435 (13%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----------AGS------KVGL 50 SGL ++ LDVIGNN+AN T G+K F D+ AG+ +VG Sbjct: 11 SGLTTNSSALDVIGNNLANINTTGYKDQRMVFRDVVYQTLSSGTSADAGTGGVNPTQVGF 70 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V I FT G TGR LDV + GFF + + V Y+R G F +D LV+ Sbjct: 71 GVGVGSIGTQFTQGNLNPTGRSLDVGLQGRGFFVMRNVE-DVAYTRAGAFGVDSAGYLVD 129 Query: 111 MQGLQLTGYPATGTPPTIQQGAN---------PTN--ISIP-NTLMAAKTTTTASMQINL 158 TG+ P + GA+ P N I IP T A TT Q NL Sbjct: 130 PG----TGFRVQRFGPVGEGGASNAGDPQFQIPGNLDIQIPFGTGAAGIATTNIDYQGNL 185 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS-SD 217 +S+ + V A+ A + V+D+Q A ++V F KT N + S +D Sbjct: 186 SSAMQVGEV----ATTA--------IQVYDAQSTARAVTVTFTKTAANTYTPSVLVSGAD 233 Query: 218 PNSIAKTATTLEFNANGTLVDGA---MANNIATGA-----INGAEPATFSLS---FLNSM 266 + T + FN+ G +V A + + GA IN A+ T +L N + Sbjct: 234 AAQVTLTGGPISFNSTGQIVGTANTPVTLTLTLGANALPGINTAQTITLNLGTAGLTNGL 293 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q GA A Q+G G L I+ DG V G ++N +T L Q+ +A F N +GL Sbjct: 294 TQFGGATTASAIGQDGSGFGTLTDVSIDADGIVQGKFTNGRTINLAQLAVAGFNNEDGLL 353 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 G+N + ++ +SG AL+G AG G G+L GALE+SNVD++ E +IVAQR +Q NA+ Sbjct: 354 RSGNNYFRSSVASGEALIGLAGQGGRGSLMGGALESSNVDIAIEFSRLIVAQRGFQVNAR 413 Query: 387 TIKTQDQILNTLVNL 401 TI + + L L N+ Sbjct: 414 TISSTNDTLQELANI 428 >UniRef50_C1DC21 Flagellar hook protein FlgE n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DC21_LARHH Length = 526 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 137/279 (49%), Gaps = 31/279 (11%) Query: 140 PN-TLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV 198 PN T A T A++ I N SDP +YN K ++T +DS GN ++V Sbjct: 263 PNATTPAGAAGTIAAVSIAFNPSDPA------------TYNSKTALTAYDSLGNPIQVAV 310 Query: 199 YFVKTGDNNWQVYTQDSSDPNSIAKTATT-------------LEFNANGTLVDGAMANNI 245 YF KT D W VY S+ T L F +G L +G Sbjct: 311 YFKKTADGQWDVYATAKHTDGSVVDLGTGNTAASPYTALGTGLAFGPDGKLTNGGPIAAA 370 Query: 246 ATGAINGAEPATFSLSFLNSMQQNT--GANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 G P F S Q T N +V Q GY + + QI+ G V Y Sbjct: 371 TYTPAGGGAPLALKFDFSGSTQFGTSFAVNELV---QPGYASAVVSNLQIDKTGIVSARY 427 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 SN QT+++GQ+VLANFAN +GL G+N W T +SG L G+ N G + + ALE S Sbjct: 428 SNGQTKVIGQVVLANFANQQGLQPIGNNRWMETYNSGNPTLNDPGSTNVGLIQSQALEDS 487 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NVDL+ ELVNMI AQR YQ+NAQTIK DQ+L +L+ +R Sbjct: 488 NVDLTGELVNMITAQRYYQANAQTIKVHDQVLQSLMQMR 526 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 101/170 (59%), Gaps = 14/170 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 MAF +SG+NAA+ LD IGNN+ANS+T GFK A FADMF A ++ G+GV Sbjct: 1 MAFQHGLSGINAASKQLDAIGNNVANSSTVGFKGSRAEFADMFAANFYGVAATQNGIGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 I Q F G T TG LD+AIS NGFF + ++NG + Y+RNGQF++D +N G Sbjct: 61 TTLIAQQFGQGNITTTGNQLDLAISGNGFFVMQNANG-ISYTRNGQFQIDR-EGYINNNG 118 Query: 114 LQLTGYPATG--TPPTIQQGANPTNISIPNTLMAAKTTTTA--SMQINLN 159 +L G+ TPP++Q G N + I N+L+ + + SM+ N+N Sbjct: 119 DKLMGWQVDDRTTPPSVQNG-NLGPLKIDNSLLEPRPSDYGGESMRFNIN 167 >UniRef50_B1M7H7 Flagellar basal body FlaE domain protein n=8 Tax=Alphaproteobacteria RepID=B1M7H7_METRJ Length = 407 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 124/407 (30%), Positives = 193/407 (47%), Gaps = 22/407 (5%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGITQDFT 62 VSG+NA + L + +NI N T G+K + F+ + GS V + Sbjct: 11 VSGMNAQSNRLGTVADNIQNQNTTGYKRASTEFSSLLIDPSPGSYDAGSVDTVVRHRISE 70 Query: 63 DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD-ENRNLVNMQGLQLTGYPA 121 +GT T T D+ I NGFF + D +G + +R G F +D + +LVN G++L GY Sbjct: 71 EGTGTATNSPTDLTIKGNGFFVVKDGSGRSYLTRAGNFVVDGQTGDLVNAAGMRLQGYSL 130 Query: 122 TGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 P++ + N+++ M +T +++ NL S P+ A+N Y+ Sbjct: 131 ANGEPSVSLNSFDGMMNVNVAKLAMKTSPSTAGTLEGNLFSDTPI-------ATNPPGYS 183 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA----TTLEFNANGT 235 K S+T +D+ G+ +YF KT +N WQV D+S P + T TTL FNA G Sbjct: 184 LKSSITTYDNLGHPFKADLYFAKTANNTWQVTAYDASLPGNYPGTPLGGPTTLTFNAFGQ 243 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 + GA N + +P T LS L+ + ++I A + NG + I+ Sbjct: 244 IA-GAPKLNFT---VPNGQPFTLDLSPLSQVADVAQVSDIKARSVNGNAASAVEGADIDT 299 Query: 296 DGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTL 355 DGTV Y + + +I +A+ + + L NV+ SG A +G A G G + Sbjct: 300 DGTVYAIYRDGSRRAAFRIPVASVGSPDNLTPRAGNVFDVNPESGPAQIGFANVGGRGHI 359 Query: 356 TNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + LE S VDL EL MI AQ Y +N++ +T ++L LVNL+ Sbjct: 360 QSKMLENSTVDLGNELATMIEAQTTYGANSKVFQTGSEMLELLVNLK 406 >UniRef50_C4Z5G6 Flagellar hook protein FlgE n=2 Tax=Clostridiales RepID=C4Z5G6_EUBE2 Length = 464 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 143/454 (31%), Positives = 214/454 (47%), Gaps = 78/454 (17%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------------------GS 46 AVSGL A T +DVIGNNIAN T FKS + +F+++F Sbjct: 31 AVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNAESGKGGTNAK 90 Query: 47 KVGLGVKVAGITQDF-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN 105 ++GLG V I+ T+G + T D+ I + FF +V+S G+ F++R G FK+DE+ Sbjct: 91 QIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFF-IVNSAGNTFFTRAGNFKVDES 149 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTA---SMQINLNSSD 162 LV G + G+ T ++ + ++ P + T+A + IN +S D Sbjct: 150 GALVTSAGANVMGWQVDETGKAVKDVVSKLYVNSPEFAYTSPQRTSAVNFTGNINASSKD 209 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV---YFVKTGDNNWQVYT----QDS 215 + T F +DS GN+ +V Y GDN T + Sbjct: 210 TITTTLNF----------------YDSLGNSFQATVNLDYAGVQGDNTQYTMTCVGVSKN 253 Query: 216 SDPNSIAKTAT-TLEFNANGTLVDGAMAN----------------NIATGAINGAEPA-- 256 +P + TA+ L FN L D + AN NI I +E + Sbjct: 254 GNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENIDIRTIGESETSPV 313 Query: 257 -TFSLSFLN------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 T S S L S++ N G + + G G + S I++ G +V +YSN T+ Sbjct: 314 LTLSGSGLTMYADKTSIKGNLGIDEV----GKGKAVGKMTSVGIDNSGYIVASYSNGDTK 369 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSG-VALLGTAGTGNFGTLTNGALEASNVDLS 368 +GQI +A F+N EGL EG+N++SAT +SG +G T + G++++G LE SNVDLS Sbjct: 370 NIGQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGVLEMSNVDLS 429 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E NMI QR YQ+N++ I D +L L+NL+ Sbjct: 430 SEFTNMITTQRGYQANSRIITVSDTLLEELINLK 463 >UniRef50_A6X6N9 Flagellar basal body FlaE domain protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X6N9_OCHA4 Length = 426 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 119/401 (29%), Positives = 199/401 (49%), Gaps = 20/401 (4%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF---AGSKVGLGVKVAGITQDFTD 63 VSG+NA A L + +NIAN++T G+K F+ + G + G + + +D Sbjct: 40 VSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQYNSGSVLTDVRYGISD 99 Query: 64 -GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY-PA 121 G +T D+AI NG+F + ++GS F +R G F D+N NLVN G L G P Sbjct: 100 QGGIRSTSSTTDLAIDGNGYFVVQGADGSTFLTRAGSFVPDKNGNLVNSAGYYLLGAGPN 159 Query: 122 TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK 181 G N N++ + + + +T+ + +NL S+D +P A +N K Sbjct: 160 DPAGALTMAGLNIINVN--SAALPPEASTSGNFTVNLPSTDQIPA--------AGEFNHK 209 Query: 182 GSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAM 241 S+ ++ +G + VYF KTG + W V ++++D +++ TTL F+ + A Sbjct: 210 TSLISYNDKGEKITLDVYFTKTGADEWSVTVKNAAD-DAVVGGPTTLTFDPTTGDMTSAG 268 Query: 242 ANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 + G G +L+ L + Q G I NG P + + +DG+VV Sbjct: 269 GVAVDLGPYGGQN---LNLN-LGASTQRAGDYTISQAQINGQAPSAVKGVDVANDGSVVA 324 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 Y N ++L +I LAN A+ + + NV+ + SG LG + G + +G LE Sbjct: 325 IYENGTQKVLARIPLANVASPDRMTVVSGNVFLPSADSGDVRLGFPQSDGMGKVMSGTLE 384 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SN D+++EL +MI AQR+Y +N++ +T ++++ LVNL+ Sbjct: 385 ESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLK 425 >UniRef50_O07884 Flagellar hook protein flgE n=7 Tax=Treponema RepID=FLGE_TREPA Length = 463 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 144/462 (31%), Positives = 221/462 (47%), Gaps = 74/462 (16%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------------SKVG 49 VSG+ T +DVIGNN+AN T GFK G +F D+ + +VG Sbjct: 9 VSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSAAARPNEEVGGVNPKEVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV +A I T G TG DV+I +GFF ++ S F++R G F +D LV Sbjct: 69 LGVLIASIDTVHTQGALQTTGINTDVSIQGSGFF-VLKSGEKTFFTRAGAFGVDNAGTLV 127 Query: 110 N-MQGLQLTGYPA--TGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLP 165 N G+++ G+ A I A ++ IP + A+ T+T NL+ LP Sbjct: 128 NPANGMRVQGWMAQDVAGERLINSSAQTQDLVIPIGQKIDAQQTSTVHYACNLDKR--LP 185 Query: 166 TVTPFSASNADSYNKKGSVT----VFDSQGNAHDMSVYFVKT-GDNN-WQVYTQDSSDPN 219 + A+ AD +K + T V+DS G H + + F + G NN WQ + DP Sbjct: 186 ELAA-DANEADV--RKSTWTTDFQVYDSFGQQHTLQINFSRVPGTNNQWQATV--AVDPG 240 Query: 220 SIAKTAT-----TLEFNANGTLVD----GAMANNIATGA----------------INGAE 254 + T T T + AN +V+ G +A+ T + GA Sbjct: 241 TEVDTQTRVGVGTSDGAANTFIVNFDNFGHLASVTDTAGNVTGPTGQVLLEASYDVVGAN 300 Query: 255 P--------ATFSLSF------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVV 300 P F+L+ N++ Q + A Q+GY G L +++I+ G + Sbjct: 301 PDDAGQVTRHAFTLNLGEIGTARNTITQFAERSTTKAYRQDGYAMGYLENFKIDQSGVIT 360 Query: 301 GNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGAL 360 G YSN +Q +GQ+ LA FAN GL G+N + + +SG+A + T+G G L G L Sbjct: 361 GVYSNGVSQDIGQLALAGFANQGGLEKAGENTYVQSNNSGIANISTSGVMGKGKLIAGTL 420 Query: 361 EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E SNVDL+ + +MI+ Q+ +Q+ A+TI+T D +L+T+++L+ Sbjct: 421 EMSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLSLK 462 >UniRef50_Q2RZC6 Flagellar biosynthesis cell-distal portion of basal-body rod n=2 Tax=Rhodothermaceae RepID=Q2RZC6_SALRD Length = 432 Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 136/444 (30%), Positives = 211/444 (47%), Gaps = 58/444 (13%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------AG----- 45 + S VSGL + T LD + NNIANS+T FK A+F++ AG Sbjct: 4 QSLSIGVSGLRSHQTRLDTVSNNIANSSTTAFKRQRAAFSEELGQAILGVGRTAGGSNIN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV----FYSRNGQF 100 SKVG GV VA I ++F+ G+ +TG D+A++ +GFF +G+ +R G F Sbjct: 64 PSKVGRGVSVASIDRNFSQGSLNDTGIKTDLALNGDGFFVASPKSGAASDQRRLTRAGNF 123 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS 160 ++N LV GL + G+ G T G PN AAK TT A + NL++ Sbjct: 124 TFNQNGELVTANGLNVQGWE-VGEDGTANTGELKNVQFDPNAQSAAKATTEAQVGGNLSA 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 + S+ V+D QG AH++ + F T ++ W +D P+ Sbjct: 183 DAEAGDTSEISS------------VVYDEQGKAHNVVINFENTSEDTWTFSVED---PDG 227 Query: 221 IAKTAT---------TLEFNANGTL-----------VDGAMANN-IATGAINGAEPATFS 259 + + A T+ F +G++ DG N+ ++ N A S Sbjct: 228 VLQDANGGGPGDANGTITFKDDGSVDSISGMTNAYDPDGNGTNDGVSLDWTNDAVQGGKS 287 Query: 260 LSF-LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 L L + Q +G+ QNG G+L Q +G + NY+N + Q+ + + Sbjct: 288 LGISLRDITQFSGSTTSKFQGQNGNSSGELSGVQFTPEGKLQLNYTNGVQEEEYQLAIGD 347 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 N GL +G+N ++ T +SG LG AG ++ +GALE+SNVDL+KE ++I AQ Sbjct: 348 VNNPNGLEQQGENFFTTTGASGDLQLGRAGRDLQTSVVSGALESSNVDLAKEFSDLIKAQ 407 Query: 379 RNYQSNAQTIKTQDQILNTLVNLR 402 R+YQ+++Q I T D++LN V L+ Sbjct: 408 RSYQASSQIITTADEVLNQTVQLK 431 >UniRef50_C7M216 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M216_ACIFD Length = 431 Score = 153 bits (387), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 141/454 (31%), Positives = 210/454 (46%), Gaps = 81/454 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGSKV------- 48 + S A+SG+ A LD I NNIAN+ T G++S FAD+ AG V Sbjct: 4 SLSSAISGIEANQEWLDNIANNIANANTTGYQSTQTEFADLLYQQQSAAGGPVPGQTGGT 63 Query: 49 -----GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 G GV+V+ DF+ GT TG DVAI GF +V+ G +Y+R+G +LD Sbjct: 64 NPLVVGSGVRVSATPTDFSQGTIVQTGTSTDVAIQGQGFL-VVNQGGQNYYTRDGALQLD 122 Query: 104 ENRNLVNMQGLQLTGY-P-ATGTPPTIQQGANPTNISIPNTLMAAKT-TTTASMQINLNS 160 LV G + G+ P A G + Q A ++IP +A T+T ++ NL + Sbjct: 123 GAGQLVTASGALVMGWVPNAAGQ---VNQNAPLAALTIPQGQVAQPVATSTITLGGNLPA 179 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 P V + T +D GN + + F + N T +++ P + Sbjct: 180 GSSNPVVV--------------TTTGYDDLGNPVPIQLTFTPSTTANQWTLTAETTPPGA 225 Query: 221 IAKTATTLEFNANGTLVDGAMANNI----ATGAIN---------------GAEPATFSLS 261 + A T V GA + + ATG I+ G P ++ L Sbjct: 226 TSPVALT---------VGGASSQTVTFDPATGQISAISGTSTANPDQLALGGFPTSYDLP 276 Query: 262 FLNSM--------------QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQ 307 +M Q + T QNGY G L + I DG + G Y+N + Sbjct: 277 AGYAMNLDFPTPGTAQAVTQFAASSPTAQVTNQNGYPSGALAGFTIGSDGVIEGTYANGR 336 Query: 308 TQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDL 367 TQ+LGQI LA FAN +GL+ +G+ +++AT +SG LG+ G G L GALE+SNV + Sbjct: 337 TQVLGQIALAQFANAQGLSKQGNLLYAATTNSGAPQLGSPGAAGLGQLVGGALESSNVSI 396 Query: 368 SKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 EL N++VAQ +YQ+N + ++T +L +LV + Sbjct: 397 GSELTNLVVAQTDYQANTKVVQTTATVLQSLVQM 430 >UniRef50_A1UTT0 Flagellar hook protein FlgE n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTT0_BARBK Length = 404 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 124/408 (30%), Positives = 187/408 (45%), Gaps = 25/408 (6%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----KVGLGVKVAGITQDF 61 +VSG+NA L I N+AN+ T G+K F++ S V GVK + + D Sbjct: 10 SVSGMNAQGKRLSGIAENVANAGTVGYKRTNVQFSNYVTPSGDYAYVPGGVK-SHVGHDI 68 Query: 62 T-DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 + G TGR D I+ NGFFR+ D NG+ F +R G F D++ L N G L Sbjct: 69 SIYGPARATGRPGDAMINGNGFFRVEDENGNEFLTRAGSFSRDKDGYLRNSSGHYLLNDE 128 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 IQ PT+ L + TT + N ++S + SYN+ Sbjct: 129 GQ----RIQIRGGPTD------LFGPEVTTGIDFKANFDASAESLGEGVIDPEDPKSYNQ 178 Query: 181 KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGA 240 K SVTV+DSQG + Y KT DN W V + A E N L D Sbjct: 179 KKSVTVYDSQGKKVQVDFYMRKTADNKWTVDAYHGDNKVGTADFNFDKEGNLQAPLPDFT 238 Query: 241 MANNIATGAINGAEPATFSLSF------LNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 + G G P TF ++ +S+ G + NG + G + Sbjct: 239 LTLPENDG---GDPPGTFQVAINLGGLGEDSLVTQKGNSYAFEAEANGMEVGSFDGFTFG 295 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 +G V Y+N++T+++ + LA + E L V+ +G ++G G G FG+ Sbjct: 296 KNGEVEVKYTNQKTRVISYVGLATVTSPESLTVLSGTVFQTNTRTGAQMVGRPGDGVFGS 355 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LT G LE SNV++S+EL +MI +QRNY +N++ +T ++++ +VNL+ Sbjct: 356 LTAGYLEDSNVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVNLK 403 >UniRef50_Q0AYM8 Flagellar hook protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYM8_SYNWW Length = 475 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 141/472 (29%), Positives = 213/472 (45%), Gaps = 82/472 (17%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------------AGSK------- 47 VSGL T +DVIGNNIAN T G+K F D +GS+ Sbjct: 9 VSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGSRGGTNPMG 68 Query: 48 VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRN 107 +GLG+ V+ I Q T TT T + LD+ I +G+F ++ +++R G F+LD N Sbjct: 69 IGLGMSVSSIDQIHTGAPTTATNKLLDMGIDGDGYF-MIRHGQQKYFTRAGNFELDTKGN 127 Query: 108 LVNM-QGLQLTGYPATGTPPTIQQGANPTN----ISIPNTLMAAKTTTTASMQI--NLNS 160 LV+ G + G+ P T Q + + + I + L+A T M NL++ Sbjct: 128 LVHTANGYYVQGWVTKIDPVTGQWNLDCSREVETVDI-SGLLACDPQATKEMSFSGNLDA 186 Query: 161 SDPLPTVTPFSASNADSYNKK--GSVTVFDSQGNAHDMSVYF------VKTGD---NNWQ 209 P V P S + S+ V+DS G +VYF V G +NW Sbjct: 187 EIPFKQVDPEDESIYPGTQESIITSMDVWDSLGKKE--TVYFRFFKYEVDAGPPRLSNWA 244 Query: 210 V-------YTQDSSDPNSIAKTATT------------------------LEFNANGTLVD 238 V +++ D +S + AT L+F+ NG +V Sbjct: 245 VDISLNNPLFENAKDYDSTSDFATVDLSVDPPTEETLTTGETEIVRLFNLQFDDNGKVVL 304 Query: 239 GAMANN--------IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 ++ I A AE F + F ++M Q G N++ QNGY G L S Sbjct: 305 AGTPDDPEPKTVDLIIDRASEAAEDIEFKIDF-SAMTQFAG-NSVTEIAQNGYGMGSLSS 362 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 Y + DG + G+Y N +T+ L ++ LA F N GL G ++ + +SG A++ Sbjct: 363 YTVGIDGVIRGSYDNGETRDLARVALARFQNPAGLTQLGGTMFQKSVNSGEAVVSPPTES 422 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +LE SNVDLS+E +MIV QR +Q+N++ I T D+++ LVNL+ Sbjct: 423 GMGKIVPSSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMIQELVNLK 474 >UniRef50_A4BEL5 Flagellar hook protein FlgE n=2 Tax=cellular organisms RepID=A4BEL5_9GAMM Length = 1472 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 177/349 (50%), Gaps = 62/349 (17%) Query: 113 GLQLTGYPATGTPP-TIQQGAN-PTNISIPN----TLMAAKTTTTASMQIN------LNS 160 GL + GY TGTPP T+ +GA+ TN I L T T ++ S Sbjct: 1127 GLTVQGY--TGTPPVTLGRGADAETNARIGGYVDIVLNEGYTMTEPDPRVAGLFNGLTES 1184 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--------NNWQVYT 212 S + F+ + ++YN+ S+TV+DS GN H + +++VK + N+W VY Sbjct: 1185 SFEEYVINEFNPDDPETYNESASLTVYDSLGNQHRLQLFYVKDPEDPARPQALNSWTVYA 1244 Query: 213 QDSSD-----------PNSIAKTAT--TLEFNANGTL---------------VDGAMANN 244 Q + P +I T L FNA+GTL VD +N Sbjct: 1245 QIDGENVGDPDASLPFPENIEPTYAEFKLYFNADGTLDEENTGEWLISNWDPVDENGDSN 1304 Query: 245 IATGAINGAE--------PAT---FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 A ++N AE P T FS+SF + Q G Q+GY G L +I Sbjct: 1305 GAYTSLNVAEGGSLPIPDPNTNSNFSVSFGGTTQYG-GPFARYNFQQDGYASGRLKDLEI 1363 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 +DDGT+ Y+N + Q+LGQ+ LA+FAN EGL G W + SG A +G GTG G Sbjct: 1364 DDDGTIYARYTNGEAQVLGQVALASFANMEGLNPVGQTEWQESFESGDATIGEPGTGLLG 1423 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 TL + ALE S VDLS++LV++I+AQRNYQ++A+TI+T + + T++NLR Sbjct: 1424 TLQSAALEDSTVDLSEQLVHLIIAQRNYQASAKTIETANAVTQTIINLR 1472 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 7/126 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLG-------VK 53 M+F +SG+ AA +L + GNNIAN++T GFK+ A F D + S +G+G V Sbjct: 1 MSFGSGLSGVAAANKDLKITGNNIANASTTGFKASRAEFGDAYTTSILGMGQDPIGSGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F G + T LD+AI NGFF N SV Y+R+G F +D++ +V+ QG Sbjct: 61 VNNVGQKFEQGNISQTNSVLDLAIDGNGFFVTEYPNNSVTYTRSGIFGIDKDGYIVSNQG 120 Query: 114 LQLTGY 119 L G+ Sbjct: 121 ATLQGF 126 >UniRef50_C5V017 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V017_9PROT Length = 498 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 10/209 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLN A+ +LD IGNN+AN++T GFK A FADMFA S +G G K Sbjct: 1 MSFQQGLSGLNGASRHLDTIGNNVANASTVGFKQSQAQFADMFAASLSGSGAMPIGTGTK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + Q FT G TNT LD AIS GFFRL D+ G+V YSRNGQF++D+ N+VN QG Sbjct: 61 LVAVAQQFTQGNITNTNNPLDTAISGQGFFRLTDAAGAVLYSRNGQFQVDKTGNVVNNQG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++GY A ++Q + I +T +A TTT ++ NL+S +P FS Sbjct: 121 HIVSGYLADAAGTIVKQ---TVPLKITSTNLAPVMTTTTTVGANLDSRAAVPATAAFSTI 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 + SY S++VFDS G +H ++YF + Sbjct: 178 DPTSYTSSTSLSVFDSLGASHVGTMYFAR 206 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 90/203 (44%), Positives = 110/203 (54%), Gaps = 19/203 (9%) Query: 218 PNSIAKTATTLEFNANGTL---------VDGAMANNIATGAINGAE-----PATFSLSFL 263 P + A TL F+ GTL GA + T + N P T + F Sbjct: 297 PATTATPFATLGFSPTGTLSTLTAGAGSTAGATLGKVTTPSFNPVSTITTSPQTITFDF- 355 Query: 264 NSMQQNT---GANNIVAT-TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 NS+ T G N V T TQNGY G L S DGT++G YSN Q++ LGQI L NF Sbjct: 356 NSLAAGTTQFGGNFGVNTLTQNGYTSGQLNSTSTGTDGTILGRYSNGQSRALGQITLTNF 415 Query: 320 ANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQR 379 N +GL G+N W T +SG GT G+ + G L A E SNVDL+ ELVNMI AQR Sbjct: 416 INPQGLQPVGNNEWVETSASGSPTTGTPGSSSLGMLQASATEDSNVDLTAELVNMITAQR 475 Query: 380 NYQSNAQTIKTQDQILNTLVNLR 402 YQ+NAQTIKTQD +L T+ +LR Sbjct: 476 VYQANAQTIKTQDSLLQTITSLR 498 >UniRef50_C6QF26 Flagellar basal body FlaE domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF26_9RHIZ Length = 417 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 123/414 (29%), Positives = 198/414 (47%), Gaps = 20/414 (4%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVK--VAGITQD 60 + ++SG+ + + + +NIAN T G+K +A FA + A V V V+ I + Sbjct: 7 MTTSISGMAVQSDRMGTVADNIANVNTTGYKEASAEFATLVAEGHVASYVPGSVSTIARR 66 Query: 61 FT--DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTG 118 G + T D+A+S NGFF + +G+ + +R G F + N LVN G L G Sbjct: 67 AVTHQGDLSYTNSPTDLAVSGNGFFMVQSPSGTPYLTRAGSF-ISTNGELVNAAGFTLLG 125 Query: 119 YPAT--GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Y G+ I A + N + A +T+ + Q+NL S + T P + + Sbjct: 126 YDLLNGGSSSVINSAAGLVPVGTANLGLKATPSTSGNFQVNLPSDAAVSTSLPSANAAGA 185 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTL 236 + K S+ +D+ G+ + +Y KTG N W+V D N+ A + A L Sbjct: 186 DFAGKTSIITYDNLGHKVTLDIYSAKTGPNQWEVSVYD----NAGASAGGGFPYAAGSQL 241 Query: 237 VDGAMANNIATGAINGAEPATFSLSFLNSMQQN---------TGANNIVATTQNGYKPGD 287 A+ + TG + PAT S++ N N GA V + NG P Sbjct: 242 TTQALTFSGTTGKLTSPSPATLSVNVPNGATLNFNMGNTTQLAGAYIPVDASANGNGPSA 301 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 + +I+ G V Y++ +I LAN A+ + L + NV++ + SG LGTA Sbjct: 302 VDRLEISAQGIVTAVYADGSRVDAFKIPLANVASPDNLTAISGNVFATNKESGDLQLGTA 361 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G+ G + +GALE S+VDL+ EL M+ AQR+Y +N++ +T ++L+ LVNL Sbjct: 362 NSGSLGKIVSGALEKSSVDLASELTTMVEAQRSYTANSKVFQTGTELLDVLVNL 415 >UniRef50_A0LDL2 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL2_MAGSM Length = 496 Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 148/500 (29%), Positives = 221/500 (44%), Gaps = 103/500 (20%) Query: 1 MAFSQAVSGLNAAATN----LDVIGNNIANSATYGFKSGTASFADMF----------AGS 46 M+ QA+ ++A TN + VIGNN++N+ T FK +F D+ A + Sbjct: 1 MSIHQAMYAGSSALTNYGNAMTVIGNNLSNTNTTAFKGSRTTFEDVLIQTVGISGTRAST 60 Query: 47 KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSV------------- 92 ++G GV V+ I Q G T D+AI GFF++ D+N GS Sbjct: 61 QIGTGVGVSAIDQLMQQGGFAGTSTVTDLAIDGQGFFKVRDANPGSAQLGGGGGNATSSM 120 Query: 93 --FYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAA-KTT 149 FY+R G FK + + +V GL L GY T + + T+I++ A K T Sbjct: 121 DTFYTRAGDFKQNLDGYMVTNAGLILQGYAVDQTSG--ETSGSMTDINLATYQSAEPKAT 178 Query: 150 TTASMQINLNSSDPLPT---VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN 206 T S+ + L S + T + + ++ SYN + V+DS G H++ ++F KT DN Sbjct: 179 TAISVGMMLQSDAAIITDANHSTYDPNDPASYNYATPIRVYDSLGQGHNVELHFKKTTDN 238 Query: 207 NWQVY----TQD---------------------SSDPNSIAKTATTLEFNANGTL----- 236 W Y ++D S P TA L F+ G L Sbjct: 239 TWNWYVAVPSEDLSAAQAGTGDLTNMMAVTGAMESAPTGAGYTAGVLTFDTYGRLDTEGS 298 Query: 237 ----------------------------VDGAMANNIATGAI------NGAEPATFSLSF 262 D +IA GA+ N AE A L Sbjct: 299 TPITFQFTGNSSTAETQQILFDFGDAITADATNDFSIADGAVLYGSGTNTAEVANTGL-- 356 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L S+Q+ + + A +QNG+ G L S + DGT+ G Y+N +T+ L QI L +F N Sbjct: 357 LGSVQRASSFTTMSA-SQNGFSAGFLESLSVGLDGTINGTYTNGETKALYQIGLVDFDNE 415 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 + L G N+++ T SGV G +G GT+ + LE SNVD+S E+VNMI QR +Q Sbjct: 416 QALDQVGANLFAETHLSGVPREGEPNSGALGTIRSYTLENSNVDMSNEMVNMITTQRAFQ 475 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +N++ I D +L L+ L+ Sbjct: 476 ANSRLITVTDGMLEELIALK 495 >UniRef50_Q1N302 Flagellar hook protein FlgE n=3 Tax=Proteobacteria RepID=Q1N302_9GAMM Length = 1240 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 142/278 (51%), Gaps = 47/278 (16%) Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--------DNNWQVYTQ----DSSD 217 F A + D+YN S T++DS GN+H M+ YFV+ +N W +Y Q D D Sbjct: 964 FDAQDQDTYNHATSTTIYDSLGNSHIMTQYFVREPLDPTRPNEENVWAMYVQIDGKDVGD 1023 Query: 218 PNSIAKTATTLE---------FNANGTL---------------VD------GAM-ANNIA 246 P+S LE FN +GT VD GA+ + N+ Sbjct: 1024 PDSTLPFPDNLEPTQFRQELFFNPDGTFDQQSTGPIFVTNWDPVDEEGSPTGALKSQNVL 1083 Query: 247 TGAINGAEPAT---FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 G + +P T F + L Q ++ +QNGY G L +I+ DG + + Sbjct: 1084 EGGLPLNDPPTNSNFEI-LLEDSSQFGSPFSVSEVSQNGYTTGRLTGLEIDADGFIFARF 1142 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 +N Q ++LGQ+ LA+F N EGL GD W + SG +G+ TG FG L + ALE S Sbjct: 1143 TNGQAEVLGQVALASFKNPEGLIPLGDTAWGESFESGTPTVGSPRTGTFGNLRSSALEDS 1202 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 NVDLS+ELV +I+AQRN+Q++A+TI+T D + T++ L Sbjct: 1203 NVDLSEELVGLIIAQRNFQASAKTIETSDTVTQTIIQL 1240 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 8/130 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGSK-VGLGVK 53 MAF+ +SG+ AA+T+L+V GNN+AN++T GFK A FAD++ GSK VG GV Sbjct: 1 MAFNIGLSGIRAASTDLEVTGNNVANASTVGFKESRAEFADVYTTTILGTGSKPVGSGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F+ G + T LD+AI NGFF L D NG+ Y+R G F LD++ +V G Sbjct: 61 VDNVRQEFSQGNISGTENALDMAIDGNGFFILND-NGTESYTRAGIFGLDKDGFVVANSG 119 Query: 114 LQLTGYPATG 123 +L GY A G Sbjct: 120 ARLQGYEANG 129 >UniRef50_Q1MRH2 Flagellar hook protein FlgE n=6 Tax=Desulfovibrionaceae RepID=Q1MRH2_LAWIP Length = 502 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 140/496 (28%), Positives = 219/496 (44%), Gaps = 105/496 (21%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSK----VGLGVKVA 55 +G+ +T L + NNIAN+ T G+K F D+F+ GS+ G+G +V Sbjct: 10 TGMKTHSTGLGTVSNNIANANTIGYKQQQVVFQDLFSQDLAIGSTGSQGPNQAGMGAQVG 69 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQ 115 + FT G D+AI GFF++ + V Y+R G F+ ++ L + G Sbjct: 70 SVRTIFTQGAFEPGNSVTDLAIGGKGFFQVTLED-KVHYTRAGNFRFTQDGFLNDPSGFT 128 Query: 116 LTGYPATGTPPTIQQGANPTNISIPNTLMA---AKTTTTASMQINL-NSSDPLPT----- 166 L G + P ++ P + + +A AKT+T + +NL +S+D + Sbjct: 129 LMGSRISNNPNIKKETLEPIQLDFNDPTVAKSPAKTSTALNAVVNLGDSTDKTQSEANPY 188 Query: 167 -----------VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF----VKTGDNNWQ-- 209 P S SN Y+ + V+D QGN+HD++VYF TG ++ Sbjct: 189 FALLESWKGNGTPPISTSN---YSYAQPMRVYDQQGNSHDITVYFDGAPSSTGSKTFEYL 245 Query: 210 VYTQDSSDPNSIAKTAT-------TLEFNANGTL--VDGAMANNIATGAINGAEPAT--- 257 V S D ++ + T + T+ F++NG L + AT +N +PA Sbjct: 246 VAMNPSEDGSAASGTDSAGLLMSGTMTFSSNGELKNMTAFTPTGSATKDLNAWQPAPLVN 305 Query: 258 ----FSLSFLNS------------MQQNT------------------------------- 270 FS +F+ + QQN Sbjct: 306 GLPQFSANFVGAGIQPLTLDFGIKSQQNMWAGAPASAAAIGTDIGKLPSMMPIQTSSGNS 365 Query: 271 ----GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 G+++ +Q+GY GDLV I +G + G YSN Q I LA F + +GL Sbjct: 366 TARNGSSSTRRYSQDGYPQGDLVDVTITSEGKLQGKYSNSQVVDFYNIPLARFTSEDGLR 425 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 EG+N +SAT SG G GT N+G L+ LE SNVD+S+E+VNMI+ QR +Q N++ Sbjct: 426 REGNNHYSATLDSGGPEFGLPGTSNYGKLSVNQLETSNVDMSREMVNMIIIQRGFQMNSK 485 Query: 387 TIKTQDQILNTLVNLR 402 ++ T D +L + L+ Sbjct: 486 SVTTADTMLQKALELK 501 >UniRef50_Q01PQ4 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PQ4_SOLUE Length = 421 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 134/438 (30%), Positives = 212/438 (48%), Gaps = 58/438 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 +FS A+S L+A AT +DV+GNN+AN T GFK+ F D+ S +VG G Sbjct: 4 SFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFRDLVTQSLGAGLGETQVGFGTG 63 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + FT G ++ LD A+ +GFF ++ G+ Y+R G F++D+ NL G Sbjct: 64 RPLTIRQFTQGAIQSSTGLLDAAVQGDGFFVAKNAQGNTVYTRAGNFQVDDAGNLKTNTG 123 Query: 114 LQLTGYPAT-GTPPTIQQGANPTNISIPNTLMAAK---TTTTASMQINLNSSDPLPTVTP 169 + G+ + T + +I +P + AAK +T ++ +NLNSS Sbjct: 124 ESVQGWTSLDSTTGVLDTNGAIGDIVVP--VGAAKQPIASTGFTLDLNLNSS-------- 173 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ----VYTQDSSD-----PNS 220 A+ D+ ++ V+DS G +H ++V+F KT + W V +D S P Sbjct: 174 --AAAEDTSKFSDTIKVYDSLGESHILTVHFQKTDASQWSYSVSVPGEDLSGGTAGTPTD 231 Query: 221 IAKTATTLEFNANGTLVDGAMANNIA---TGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 I + + L F A+G L A + I TG +GA A L + N N G Sbjct: 232 IGASGS-LTFGADGQLTSPAAGSVIGLDITGLASGA--ADMHLDW-NPRTDNGGGR---- 283 Query: 278 TTQNGYKPG-------------DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 TQ G +P L+ + D G ++ YS+ Q ++GQ+ +A+ N E Sbjct: 284 ITQFG-QPSSASASSQNGSAAAQLIRVGLADGGKMLAQYSDGQQVVVGQVAMASVRNPES 342 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L + G+N + A+ + +G TG G + GA+EAS VD++KE N+IV QR YQ+N Sbjct: 343 LIAVGNNNYQASARTATPAIGLPNTGGRGDIVGGAIEASTVDIAKEFTNLIVLQRGYQAN 402 Query: 385 AQTIKTQDQILNTLVNLR 402 ++ I T D++ +NL+ Sbjct: 403 SRVITTVDELSQETINLK 420 >UniRef50_A6CQ97 Flagellar hook protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQ97_9BACI Length = 396 Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 136/428 (31%), Positives = 197/428 (46%), Gaps = 67/428 (15%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGS-------------KV 48 +SG+ T LDVIGNNIAN TYGFK G +F D +G+ +V Sbjct: 4 GISGMKNFQTKLDVIGNNIANVNTYGFKKGRVTFKDTMNQTISGASAAQEARGGRNPMQV 63 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLG ++ I T + +TGR LD+AI+ +G+F +V + FYSR G F LD+N L Sbjct: 64 GLGSTLSTIDTIHTQSSLQSTGRPLDLAINGDGYF-VVKQGDAQFYSRAGNFYLDDNGTL 122 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 VN G+++ Y G I+ N+ N + AK T + SM NL++ Sbjct: 123 VNGDGMKVQSY-ENGVLQDIK-----VNV---NAQLPAKITESISMFGNLSND------- 166 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 A + + ++ +V D + DM + T W + + + + A L Sbjct: 167 ---AVGNEPFVQQINVVTNDGKQITLDMKLTPQGTPSTKWGMEFINQNGDTPLNSAAYVL 223 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS--------------MQQNTGANN 274 +F G VD A A P L + +S N G + Sbjct: 224 DF---GNPVDPA------------ANPPNVDLPYTDSNGITQNLNVTMDYTQLTNLGGDL 268 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 A +G G L S+ I G + G YSN + +G + LA F+N GL G N + Sbjct: 269 SAAADPDGNTAGSLESFNIGSMGEINGVYSNGEITTIGYLALAKFSNPSGLTKAGGNSFQ 328 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 + +SG + AG G GT+ +G+LE SNVDLS+E MI AQR +Q+N + I T D+I Sbjct: 329 QSVNSGTPNVNVAGEGR-GTIVSGSLEMSNVDLSEEFTEMISAQRGFQANTRIITTSDEI 387 Query: 395 LNTLVNLR 402 L LVNL+ Sbjct: 388 LQELVNLK 395 >UniRef50_Q11LP2 Flagellar basal body FlaE n=7 Tax=Alphaproteobacteria RepID=Q11LP2_MESSB Length = 422 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 127/436 (29%), Positives = 197/436 (45%), Gaps = 65/436 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDFTDGTT 66 VSG+NA A L + +NIANS+T G+K T F+ + V G + G Sbjct: 11 VSGMNAQANRLSTVADNIANSSTNGYKRATTEFSTLV----------VPGTQGSYNSGGV 60 Query: 67 TNTGRGL--------------DVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 T+T R D+A++ +GFF + SNG + +R G F LD + LVN Sbjct: 61 TSTVRNAVSAQGVLQYTTSITDLAVNGSGFFIVQGSNGQPYLTRAGSFVLDGDGRLVNSS 120 Query: 113 GLQLTGYP-ATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G QL GY A GTP G A I+I + A + NL P Sbjct: 121 GYQLMGYSYANGTPSATANGYAGLEPITIKQPELVATPSRNGVFSANL----------PL 170 Query: 171 SASNADS---------------YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS 215 A D+ Y+ K S+ + ++G + VYF KTGD+ W+V D Sbjct: 171 DAEIVDTGAGQSTAGDNTSTSEYSVKTSLVAYGNRGEQVLLDVYFTKTGDDEWEVAVFDR 230 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE--------PATFSLSF-LNSM 266 +D A T + A+G L + + TG + G P L L+ + Sbjct: 231 AD----ATPDTGFPY-ASGPLATDQLTFDPTTGKLTGTSVTGVTIPVPGGDDLELDLSQL 285 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q + +G P + S +I+ +G V Y++ + L +I LAN + + L Sbjct: 286 SQLDSGFQVYDAEVDGTPPTSIDSIEISAEGIVYAQYADGSFKPLYRIPLANVTSPDQLE 345 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 N ++ T +SG +G AG+ G + +GALE+SNVD+++EL +MI +QR+Y +N++ Sbjct: 346 VLSGNAFAETAASGAVRIGFAGSDGLGDIASGALESSNVDIAEELTSMIESQRSYTANSK 405 Query: 387 TIKTQDQILNTLVNLR 402 +T ++ LVNL+ Sbjct: 406 VFQTGSDLMELLVNLK 421 >UniRef50_O52070 Flagellar hook protein flgE n=37 Tax=Rhizobiales RepID=FLGE_BRUAB Length = 396 Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 126/404 (31%), Positives = 196/404 (48%), Gaps = 27/404 (6%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL---GVKVAGITQDFTD 63 VSG+NA A L + +NIAN++T G+K F+ + S G G + + +D Sbjct: 11 VSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSVLTDVRYGISD 70 Query: 64 -GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPAT 122 G +T D+AI NG+F + GS + +R G F D+N +LVN G L G A Sbjct: 71 QGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAGYYLLGAGAD 130 Query: 123 GTPPTIQ-QGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK 181 + G N N++ + A+ +T +NL S+D P A YN K Sbjct: 131 EAAGGLTVAGLNVVNVNA--AALPAEGSTAGDFTVNLPSTDQAPA--------AGGYNHK 180 Query: 182 GSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN-GTLVDGA 240 S+ ++ +G + VYF KTG + W V ++++D I T L F+ G LV G Sbjct: 181 TSLISYNDKGEKITLDVYFTKTGADEWNVSVKNAADGVEIG--TTVLNFDPTTGDLVSGG 238 Query: 241 MANNIAT--GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 N+A GA G T +L+ S Q+ G I NG P + + +DG Sbjct: 239 ---NVAVNLGAYGGQ---TLNLNLGGSTQR-AGDYTISQAVINGQAPSSIKGVDVGNDGA 291 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 VV Y N ++L +I LAN A+ + + N++ + SG LG G + +G Sbjct: 292 VVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGMGKIMSG 351 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SN D+++EL +MI AQR+Y +N++ +T ++++ LVNL+ Sbjct: 352 TLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLK 395 >UniRef50_Q21IK9 Flagellar basal body FlaE n=3 Tax=Bacteria RepID=Q21IK9_SACD2 Length = 804 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/284 (36%), Positives = 155/284 (54%), Gaps = 55/284 (19%) Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK---------TGDNNWQVYTQ----DSS 216 F ++ +YN S+T++DS GN+H M+ YFVK + N+W +Y + D Sbjct: 525 FDPTDQSTYNSATSMTIYDSLGNSHVMTQYFVKQDYDATDPTSVPNHWVMYARIDDADVG 584 Query: 217 DPNSI----AKTATTLE-----FNANGTL---------------VD------GAMA--NN 244 DP++ A T TL FN +G+L VD GA+ N Sbjct: 585 DPDTTLPPPANTQPTLASYDVYFNEDGSLNTLLTSDMLISNWTPVDADGNPNGALGPQNI 644 Query: 245 IATGAINGAEPATFSLSFLNSMQQNT------GANNIVATTQNGYKPGDLVSYQINDDGT 298 +A G EP T S +F+ S++ T N+I +QNG+ G L I D+GT Sbjct: 645 LAGGTQTVVEPPTSS-NFVISLEGTTQFGSEFSVNDI---SQNGFSTGRLSGLNIADNGT 700 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 + ++N Q+ LGQ+VLA+F+N +GL G+ +W+ T SG +GT G+ G + G Sbjct: 701 IFARFTNGQSLRLGQVVLADFSNQQGLQPTGNTMWAETFESGSPNVGTPGSAALGAVQAG 760 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ALE SNVDLS++LVN+I+AQRN+Q++A+TI+T D + T++NLR Sbjct: 761 ALEESNVDLSEQLVNLIIAQRNFQASAKTIETADAVTQTIINLR 804 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 11/171 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F A+SG+ AA+++L V GNNIAN++T GFK+ A F D++A S +G GV+ Sbjct: 1 MPFDTALSGIRAASSDLSVTGNNIANASTTGFKASRAEFGDVYATSVLGAGVNAIGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F+ G T LD+AI+ NGFF +V G Y+R G F LD+ +VN G Sbjct: 61 VQEVAQRFSQGNVGFTENELDLAINGNGFF-VVSQQGETLYTRAGSFGLDDEGYVVNNTG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 L G+ A G G +I I + +A + TT +NL+S++P+ Sbjct: 120 AVLQGFSADGAG---NIGGIQGDIRIQTSNLAPRQTTGVESLLNLDSTEPV 167 >UniRef50_A0AGF2 Complete genome n=21 Tax=Listeria RepID=A0AGF2_LISW6 Length = 411 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 125/426 (29%), Positives = 197/426 (46%), Gaps = 54/426 (12%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-------------FAGS---KVG 49 A+SG+NA L V NNIAN+ T G+K + F D+ +AG+ G Sbjct: 8 AISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAGTNPMSFG 67 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-SNGSVFYSRNGQFKLDENRNL 108 G K+ I D+T G+ T+TGR D A+ GFF D + G++ Y+R+G F + +N L Sbjct: 68 SGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFAVSDNNYL 127 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTV 167 QG + GY AT + G N I IP N+ + + T S+ N+ Sbjct: 128 TTQQGKYVMGY-ATDKNGNVLNG-NLQPIQIPLNSAIPGEATKNGSLSGNI--------- 176 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS----------- 216 P D+ + + ++V+D+ G H + V N + T D+S Sbjct: 177 -PLDWGEKDTISSE--LSVYDNAGGKHKLQV--------NMKAATPDASGNVSYEYEIQM 225 Query: 217 DPNSIAKTAT-TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 D ++ T TL +NA G L + NI + + L+ S N G N + Sbjct: 226 DGKALTPPVTGTLNYNAQGELTNPDALKNIQINSTVNGKQVNMGLNL--SGLTNYGTNQV 283 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + T +G + Y + D G + +YS+ + Q+ +A F+N +GL G+ + Sbjct: 284 FSPTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVP 343 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 SSG A+ G AG G ++ +LE SNVDLS+E VN++ Q +Q N + I+ D ++ Sbjct: 344 GLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVM 403 Query: 396 NTLVNL 401 +VNL Sbjct: 404 KQIVNL 409 >UniRef50_Q2SDU1 Flagellar hook protein FlgE n=3 Tax=Gammaproteobacteria RepID=Q2SDU1_HAHCH Length = 651 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/272 (35%), Positives = 148/272 (54%), Gaps = 39/272 (14%) Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVYT----QDSSDPN 219 F ++ ++YN S T++DS GN+H ++ +FVK T DN W +Y QD DP Sbjct: 380 FDPADENTYNHATSTTIYDSLGNSHVLTTFFVKEPQTATTPDNLWTMYALIDGQDIGDPL 439 Query: 220 SIAKTAT----TLEFNANGT----LVDGAMANN----IATGAINGAE------------- 254 T T +L F+ +G+ L D + +N G NGAE Sbjct: 440 VTGGTPTRASYSLVFDQDGSINEVLSDDVLISNWTPLAPDGTPNGAEGPLNVADGGTLPI 499 Query: 255 --PATFSLSF--LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 P T S F L + Q A + QNG+ G L+ ++D G + Y+N ++++ Sbjct: 500 PDPPTSSNFFVDLGTTTQYGSAFAVNDLQQNGFTTGRLIGLDVDDGGVIFARYTNGESKV 559 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 LGQ+ LANF + +GLA G+ W T +SG ++G+ GT + G + + +LE SNVDLS++ Sbjct: 560 LGQVALANFNDIQGLAPVGETTWVETFNSGNPVIGSPGTASLGAIRSSSLEDSNVDLSEQ 619 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LV +I+AQRNYQ+NA+TI+T + I T++NLR Sbjct: 620 LVGLIIAQRNYQANAKTIETANAITQTIINLR 651 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 10/171 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F+ A++G+ AA+ +L+V GNNIAN++T GFK A F D++A S VG GV+ Sbjct: 1 MPFNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGDGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F G + T GLD+AI+ GFF L +NG YSR G F +D+ N+VN G Sbjct: 61 VQKVRQEFAQGNLSFTENGLDLAINGEGFFILDTNNGDRRYSRAGAFGIDKEGNVVNSSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + L G+ A + + G ++ I +T +A TT +NL++S+P+ Sbjct: 121 MHLQGFVANDS--GVVSGV-LGDLVIDDTSLAPDRTTRVDANLNLDASEPV 168 >UniRef50_B7HLV4 Flagellar hook protein n=32 Tax=Bacillus cereus group RepID=B7HLV4_BACC7 Length = 407 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 120/424 (28%), Positives = 199/424 (46%), Gaps = 46/424 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-------------FAGS-- 46 A +++G+NA L V NNIAN+ T G+K A F D+ +AG+ Sbjct: 4 ALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAGTNP 63 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDE 104 +G GVK++G D+TDGT T TG A+ NGFF + DS G++ ++R G F + Sbjct: 64 KSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFTISS 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + N +G + YPA + + P + +P + + T+ + N+ Sbjct: 124 DYYITNTEGQYVFAYPADSSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIP---- 179 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ--VYTQDSSDP--- 218 AD+ + V+D+ GN M V F + G++N++ VY ++ S Sbjct: 180 -----------ADAKQITQELPVYDNAGNTWTMRVEFKQDGEHNYKYKVYMRNDSKKETA 228 Query: 219 -NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 N + ++F+A G N A NG T + F + + + + Sbjct: 229 FNEVDGAGGEVKFDAVGKP---NPVNPEANIPFNGG---TVKIDF-SKLTNHPTEKTLAV 281 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 T +G + I D G V+ YS+ + GQ+ +A F N GL G+ ++AT Sbjct: 282 TDVDGRAAATVKDCFIADGGYVMVKYSDGSMKAAGQLAVAMFPNEGGLMKTGNGNYTATN 341 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 ++G+ +G +G G + A E +NVDLS E V++++ QR +Q NA+ IK D++LN Sbjct: 342 TTGILAMGVSGQNGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNE 401 Query: 398 LVNL 401 +VNL Sbjct: 402 VVNL 405 >UniRef50_A0Q031 Flagellar basal-body rod protein FlgG n=1 Tax=Clostridium novyi NT RepID=A0Q031_CLONN Length = 485 Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 143/481 (29%), Positives = 205/481 (42%), Gaps = 90/481 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 +SG+ T LDV GNNIAN +T GFKS F DM + G +VG Sbjct: 9 ISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQGGVNGKQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFF-----RLVDSN--------------G 90 LGV+VAGI + G T R LDVA+ G+F L +SN G Sbjct: 69 LGVQVAGIDTVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVSESEHTMSG 128 Query: 91 SVF---YSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAK 147 F Y+R+G F LD NL+ G ++ GY T G ++SI A Sbjct: 129 GAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINEKDST---GNATGDVSIDYNANGAV 185 Query: 148 TTTTASMQINLNSSDPL-----PTVTPFSASNADSYNK---KGSVTVFDSQGNA------ 193 A + L +S+ L P A+ D N G +FD+ G+A Sbjct: 186 NFVNADGEFGLKASNTLVPLRIPDSVHMKATTKDKQNMIITNGDKILFDNDGDATNGIQG 245 Query: 194 -HDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAING 252 ++S+ G N +V + + + + N T ++ A A+ I AI+G Sbjct: 246 FPEISLDDTFKGKENVKVEIKYDTKDKAGKDKGWIIFLNGKKTFLE-ANASEIDDAAIDG 304 Query: 253 AEPATFSLSFLNSMQQNTGANNIVAT-------------TQNGYK---------PGDLVS 290 + A S S +++ + I T + YK L S Sbjct: 305 VDAALLSASEKKDIKELLNGSKITITDPDPNTTNIDTDDKKAKYKWSFTLQPECDKKLRS 364 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL----LGT 346 + I DG V G + LGQI A+F N EGL EG N++S T +SGV LGT Sbjct: 365 FAIEKDGLVKGVLDDGTVTALGQIATASFKNQEGLKKEGKNLYSNTANSGVPTVRSGLGT 424 Query: 347 A-----GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G G +G + G LE SNVDL+++ +MIV R +Q++ + I T D+IL ++NL Sbjct: 425 PKNLDNGDG-YGEMLQGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIINL 483 Query: 402 R 402 + Sbjct: 484 K 484 >UniRef50_B9MGE1 Flagellar basal body FlaE domain protein n=3 Tax=Comamonadaceae RepID=B9MGE1_DIAST Length = 531 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 124/235 (52%), Gaps = 34/235 (14%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M F Q +SGLNA+A NLDVIG+NIANS T GFK+ FA M A G+ G+GV+ Sbjct: 1 MGFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ I Q F G T TG LDVAI+ NGFF L +GS Y+R G FKLD N+V G Sbjct: 61 VSAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDG 120 Query: 114 LQLTGYP----------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 Q+ GYP +T P T PT IP A+ TT NL++ P Sbjct: 121 AQVMGYPIDPVTGLRTSSTAVPLTF-----PTTAPIP-----ARQTTAIKTAFNLDARTP 170 Query: 164 ----LPTVT-PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ 213 P T P +A+ +Y S+ V+DSQG A +S YF K G N W +Y Q Sbjct: 171 NAKGDPGATPPVAATPRTTYGT--SLNVYDSQGVATPLSFYFEKNGANTWDIYNQ 223 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 97/149 (65%), Gaps = 1/149 (0%) Query: 255 PATFSLSF-LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 P ++ ++ LN + Q + +Q+GY G+L + ++G ++ YSN T+ GQ Sbjct: 383 PGSYPVTLDLNKVTQFGTKFAVSELSQDGYTSGELTGINVENNGMIMTRYSNGVTRAEGQ 442 Query: 314 IVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVN 373 I LA+F N +GLA+ G N W T SG +LG GNFG L GALE SNVDL+ ELVN Sbjct: 443 IALASFRNTQGLAAVGGNNWVETYESGQPVLGAPTDGNFGALRAGALEDSNVDLTAELVN 502 Query: 374 MIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 M+ AQR YQ+NAQTIKTQDQ+++TLVNLR Sbjct: 503 MMTAQRAYQANAQTIKTQDQVMSTLVNLR 531 >UniRef50_Q63D88 Flagellar hook protein n=35 Tax=Bacillus cereus group RepID=Q63D88_BACCZ Length = 437 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 131/449 (29%), Positives = 209/449 (46%), Gaps = 66/449 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-------------FAGS-- 46 A +++G+NAA L V NNIAN+ T G+K A F D+ +AG+ Sbjct: 4 ALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAGTNP 63 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDE 104 +G GVK +G + DF+DG+ T T ++ AI NG F + D N G+V Y+R G F + + Sbjct: 64 KSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFGVSK 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + G + GY I + P+ I IP + + T A++ NL + Sbjct: 124 DNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPRN-- 181 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV----------------KTGDNN 207 NA S+ TVFD++GN+ + V K G+ Sbjct: 182 ---------QNALSH----EFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKPKAGEYT 228 Query: 208 WQVYTQDSSDPNSIAKTAT------TLEFNANGTL--VDGAMANNIATGAINGAEPATFS 259 + V ++ S K L F+ G L D + + TG I + T + Sbjct: 229 YSVSVRNDSKNEKEFKPIVGMPDDKPLIFDNLGNLKQTDEPVQKDPVTGEI--TKGGTIT 286 Query: 260 LSFLNSMQ------QNTGANNIVATTQNGYKPGDLV-SYQINDDGTVVGNYSNEQTQLLG 312 + F + + N ++TT+ +P + Y I+D G V+ YS+ +++G Sbjct: 287 IPFGDGLTLDLSGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSMKVVG 346 Query: 313 QIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELV 372 Q+ +A F N+ GL G+ + AT S+G+ +G AG G + A E+SNVDLS E V Sbjct: 347 QLAVATFPNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFV 406 Query: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++++ QR +Q NA+ IK D++LN +VNL Sbjct: 407 DLMLYQRGFQGNAKVIKVSDEVLNEVVNL 435 >UniRef50_Q0G073 Flagellar hook protein E n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G073_9RHIZ Length = 390 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 137/420 (32%), Positives = 206/420 (49%), Gaps = 57/420 (13%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAG--ITQD 60 F +VSG+NA + L + +NIANSAT G+K F+ + S G G +G ++Q Sbjct: 7 FRTSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSG-GRGNYTSGSVLSQT 65 Query: 61 FTD----GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRN-----LVNM 111 D G T T D+AIS +GFF + D NG F++R G F + LVN Sbjct: 66 RYDISTQGLVTTTSSKTDLAISGDGFFVVEDQNGQPFFTRAGSFVQRTEPDTGETFLVNA 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTA--SMQINLNSSDPLPTVTP 169 G +LTG Q G P + + ++A + TTT+ SMQ+ LN + Sbjct: 126 AGYKLTG----------QNG--PVQVPV-GEIVAPQATTTSELSMQLPLNGTG------- 165 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLE 229 GS T F+S+G A ++S+ +TG + W + T D+ P++ A ++ Sbjct: 166 ---------THTGSFTAFNSRGEAVNVSMTATRTGADQWDL-TFDA--PSASAPVTVSVT 213 Query: 230 FNANGTLVDGAM--ANNI-----ATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 F+A L + + A N+ A G G P+T +L+ L + A A NG Sbjct: 214 FDAATGLPNPPITTAGNLQIVPPANGG--GGAPSTVALN-LGQLTSYDAAFTFQAEA-NG 269 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 + I+DDG V G + + L +I LA F + + L NV+ +Q SG Sbjct: 270 NPATGFSDFTISDDGRVFGILTTGRQIELDRIQLARFQSPDQLDVISGNVFRPSQLSGDP 329 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G +G FG L +GALE SNVDL+ EL +MIV QR+Y +N++T +T ++L+ LVNL+ Sbjct: 330 QFGFSGELGFGDLISGALEESNVDLASELTDMIVTQRSYAANSKTFQTGSEMLDLLVNLK 389 >UniRef50_UPI0001BCD67A flagellar hook protein FlgE n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD67A Length = 524 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 143/520 (27%), Positives = 222/520 (42%), Gaps = 129/520 (24%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL + T +DVIGNNIAN T GFK+G +F DM + + +VG Sbjct: 9 VSGLKSHNTRMDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAASPGTTIGGTNPKQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV V GI F+DG+ +TG+ D+A++ N F +V +Y+RNG F+ D N V Sbjct: 69 LGVSVGGIDTIFSDGSVQSTGKNTDLALTGNALF-VVKRGDQTYYTRNGAFEFDAKGNYV 127 Query: 110 -NMQGLQLTGY--PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL-- 164 GL + G+ T +GA + +M + T T S NL+++ P+ Sbjct: 128 LPSSGLHVQGWMNKTTNNSKVSTEGAAENIVIDAGRIMGPEQTDTVSYSENLDANTPIIT 187 Query: 165 ------PTVTP------------FSASNAD-----------------------SYNKKGS 183 P TP +AS A S K S Sbjct: 188 GYSFSDPRTTPPTPHARTTSGMYITASQAQPVTLSLSDGTKQTVTSGTYTIGRSMPKVTS 247 Query: 184 VTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT---------------- 227 +DS GN H+ + ++ D+ Y QD+ D NS+ K A+T Sbjct: 248 FGYYDSSGNKHE-GLLILEKADSRTVTY-QDA-DGNSVTKRASTWIARVGNPTARNTGGS 304 Query: 228 ----------LEFNANGTLVDGAM-------------------------ANNI------A 246 L F+ NG L G + AN+I A Sbjct: 305 TTTHTLSSATLAFDENGVLRAGVLGGTSPNLTHDTDSPVTPPAVPPAVSANSIENATFTA 364 Query: 247 TGAINGAEPATFSLSFLNS---MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 T + + P + ++ F N+ + Q G + + A NGY G L S ++ G + G Y Sbjct: 365 THSNAVSSPQSITVQFANNESPLTQYAGYDTVKAAA-NGYASGSLASVSVDSTGVITGTY 423 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT-LTNGALEA 362 +N + QI +A F+N GL G +++ + +S ++ + G +T ALE Sbjct: 424 TNGVRRAEAQIGVAKFSNPSGLTKIGGSLYQESNNSNSKVVRAQTVESTGAKITPSALEM 483 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVD++ + +MI+ QR +QSN++ I D++L TL+N++ Sbjct: 484 SNVDIADQFSDMIITQRGFQSNSKVITVGDEMLETLINMK 523 >UniRef50_C5BRS0 Flagellar basal body protein FlgE n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRS0_TERTT Length = 813 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 149/285 (52%), Gaps = 49/285 (17%) Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK---------TGDNNWQVYTQ--- 213 T+ F ++ +YN S+ V+DS G +H M+ YFV+ T N+W ++ Q Sbjct: 530 TLNAFDPTDQGTYNSATSMNVYDSLGVSHIMTQYFVRQEYDPNDPTTSPNHWVMHVQIDG 589 Query: 214 -DSSDPNSIAKTATTLE---------FNANGTLVD---------------------GAMA 242 + DP++ +E FN NGTL + GAM Sbjct: 590 RNVGDPDTSLPPPANIEPTLASFNVFFNENGTLNELLTEDMLISNWVVLDQQGNPTGAMG 649 Query: 243 --NNIATGAINGAEPAT---FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 N +A G+I EP T F + + Q T + + T Q+GY G L I+++G Sbjct: 650 PQNVLAGGSIVIPEPPTSSNFVIELAGTSQSGTDFS-VDDTDQDGYASGRLSGLAIDENG 708 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 + Y+N + Q L Q+ LA+F N +GL G+ +W+ + +SG +GT +G G + + Sbjct: 709 VIFARYTNGEGQPLAQVALADFTNQQGLQPIGNTMWAESFASGPPNVGTPQSGALGAIQS 768 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GALE SNVDLS+ELV +I+AQRN+Q++A+TI+T DQ+ T++NLR Sbjct: 769 GALEESNVDLSEELVRLIIAQRNFQASAKTIETADQVTQTIINLR 813 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 15/173 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F+ A+SG+ AA+T+L V GNNIAN++T GFK A F D+FA S +G GV+ Sbjct: 1 MPFNTALSGIRAASTDLTVTGNNIANASTIGFKRSRAEFGDVFATSVLGAGANAIGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F G T LD+AI+ NGFF L D G+ YSR G F LD+ + N G Sbjct: 61 VEDVAQNFKQGNVAFTQNELDLAINGNGFFVLSD-QGTPVYSRAGTFGLDDQGYVTNNVG 119 Query: 114 LQLTGYPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 +L G+ A TG I +I I + + + TT + L+S++P+ Sbjct: 120 ARLQGFQADSTGNISGISD-----DILIQTSNLPPRQTTLVESVLTLDSTEPV 167 >UniRef50_B2JJ19 Flagellar basal body FlaE domain protein n=6 Tax=Burkholderia RepID=B2JJ19_BURP8 Length = 501 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/250 (40%), Positives = 138/250 (55%), Gaps = 18/250 (7%) Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 PT F +N+ +Y+ SV V+DS G + +YFVKT +W VY D N Sbjct: 257 PTALAFDPTNSATYSYSTSVPVYDSLGGEQQVDMYFVKTSAGSWDVYA--GKDGNVSTTK 314 Query: 225 ATTLEFNANGTLVDGAMANNIATGAI-----------NGAEPATFSLSFLNSMQ--QNTG 271 T +F+ +G LV ++ T + A P +L + Q G Sbjct: 315 IGTAKFDTSGNLVSTLDSSGNPTSTLFAFNFSIPNSDGSATPQNLTLKIGGTTQFGSKDG 374 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 N++ TQ+G+ G L ++ + DG + GNYSN QT LGQ+ LA FAN GL + G+N Sbjct: 375 TNSL---TQDGFAAGQLTNFTVGTDGIITGNYSNGQTAALGQVALATFANQNGLINLGNN 431 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + AT +SGVA++ G+ N G+L GA E SNVDL+ ELVN+I AQRNYQ+NAQTIKTQ Sbjct: 432 QFQATAASGVAVVAAPGSTNHGSLQGGATENSNVDLTSELVNLITAQRNYQANAQTIKTQ 491 Query: 392 DQILNTLVNL 401 + TL+NL Sbjct: 492 QTVDQTLINL 501 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 133/243 (54%), Gaps = 23/243 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M + Q +SGL A+++LDVIGNNIAN+ T GFK G A FADM+A S ++G+G + Sbjct: 1 MGYQQGLSGLAGASSDLDVIGNNIANANTVGFKQGAAQFADMYANSVATAVNNQIGIGTR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + Q+F+ GT + L VAI+ +GFF++ +NG++ YSRNG F+LD+N + N G Sbjct: 61 MSQVEQNFSQGTISTDDIALHVAINGSGFFQM-SNNGALTYSRNGVFQLDKNGYITNADG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP---F 170 L+L GY A G P + +P + T T + +NLN+ D L TP F Sbjct: 120 LKLMGYAANANGIINTAGTVP--LQVPTANIPPTATKTITAGLNLNAQDALKLGTPSVTF 177 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 + S N S+T NA+ ++ F ++ YT SSD T+TT + Sbjct: 178 TTSTGSLTNNGVSITDATQGTNANTYTITF-----SSPTAYTVTSSD-----GTSTTGTY 227 Query: 231 NAN 233 +AN Sbjct: 228 SAN 230 >UniRef50_Q9ZKY0 Flagellar hook protein flgE n=23 Tax=Helicobacteraceae RepID=FLGE_HELPJ Length = 718 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 88/236 (37%), Positives = 132/236 (55%), Gaps = 19/236 (8%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNNW----------QVYTQDSSDPNSIAKTATTLEFNA 232 S+ V DS G H M + F ++G W ++ ++ PN L FN Sbjct: 485 SIDVIDSLGTKHAMRIEFYRSGGAEWNFRVIVPEPGELVGGSAARPNVF--EGGRLHFNN 542 Query: 233 NGTLVDGAMANNIATGAINGAE-PATFSLSF-----LNSMQQNTGANNIVATTQNGYKPG 286 +G+L G + NGA+ P +L+F + + + A QNGY+ G Sbjct: 543 DGSLA-GMNPPLLQFDPKNGADAPQRINLAFGSSGSFDGLTSVDKISETYAIEQNGYQAG 601 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 DL+ + + DG ++G +SN +T L Q+ LANFAN+ GL + G NV+S T +SG AL+G Sbjct: 602 DLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNVFSQTGNSGQALIGA 661 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A TG G+++ LE+SNVDLS+ L N+IV QR +Q+N++ + T DQILNTL+NL+ Sbjct: 662 ANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNLK 717 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 104/235 (44%), Gaps = 37/235 (15%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK------------------V 48 V+G+ A LD+ NNIAN T GFK ASF DM + K V Sbjct: 9 VNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGLAGQNDFSV 68 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLDENRN 107 GLGV V T+ F+ G NT D+AI +GFF + G ++R+G+F D + Sbjct: 69 GLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGEFLFDSQGS 128 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANP-----------TNISI-PNTLMAAKTTTTASMQ 155 LV GL + G+ G+ T +G++ NI I P +M A+ + SM+ Sbjct: 129 LVTTGGLVVQGWVRNGS-DTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARASNRISMR 187 Query: 156 INLNSSDPLP-TVTPFSASNADSYNKKGSVTVFDSQGN----AHDMSVYFVKTGD 205 NLN+ T F+ ++ G V+DS N A DM + + GD Sbjct: 188 ANLNAGRHADQTAAVFALDSSAKTPSDGINPVYDSGTNLAQVAEDMGSLYNEDGD 242 >UniRef50_A5W0G4 Flagellar basal body FlaE domain protein n=3 Tax=Pseudomonas RepID=A5W0G4_PSEP1 Length = 584 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 137/259 (52%), Gaps = 26/259 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA LDV GNNIAN T GFK+ A FAD++AG+ +VG GV Sbjct: 1 MSFNIGLSGLYAANKQLDVTGNNIANVNTTGFKASRAEFADVYAGANRLGVGKNQVGNGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 ++A I+Q FT G TG LD+ I GFF L D NGS Y+R G F+ ++ + Sbjct: 61 RLAAISQQFTQGDVNTTGNALDMGIQGQGFFVLSD-NGSKVYTRAGSFQPSKDNFVETSD 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---PL----- 164 GL+L GY A T + G T++ I + + K T+ INLNSS P Sbjct: 120 GLRLQGYMADATGKIQKSGL--TDLKIDTSALQPKPTSLIDQGINLNSSAASIPFQVYDN 177 Query: 165 ---PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----QDSSD 217 P + F ++ +Y + + TV D+ G H++ Y+ KT N W +YT ++ D Sbjct: 178 TKPPALAAFDPADPSTYQRSSTSTVLDADGVEHEVQQYYRKTDTNEWTMYTLVDGRNPFD 237 Query: 218 PNSIAKTATTLEFNANGTL 236 P S A T+ +N++GT+ Sbjct: 238 PASTTPLAGTINYNSDGTI 256 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 38/268 (14%) Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----QDSSDPNSIAKT 224 PF S+ +Y + V+DSQGN H M ++ KTG N W +YT ++ +P S Sbjct: 319 PFDPSDDSTYTRSFPTKVYDSQGNEHTMEQFYRKTGTNEWTMYTLVDGRNPFNPGSTEPL 378 Query: 225 ATTLEFNANGTL-------------------------------VDGAMANNIATGAINGA 253 T+ FN++G++ + A N A GA+ A Sbjct: 379 VGTIAFNSDGSVNSMTADNTGHPVGTSFTVVNNTFSMIGWVPAAEDASGNWSANGAVGDA 438 Query: 254 EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 S++ S T ++ +Q+GY G L + I+ G + ++SN Q++ +GQ Sbjct: 439 AGMKMSMASTTSYNTETAR---MSQSQDGYATGILSNLSIDATGVLFASFSNGQSRAIGQ 495 Query: 314 IVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVN 373 + LA+FAN +GL G W+ T +SG+ + + TG G + + +LE SNV+L++ELV+ Sbjct: 496 VALASFANEQGLQQIGSTRWTETYNSGIPGIDSPKTGTLGAIESNSLEGSNVNLTQELVD 555 Query: 374 MIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +I AQ YQ+NA+TI T+ ++ T++ + Sbjct: 556 LIKAQSYYQANAKTISTESTVMQTIIQM 583 >UniRef50_Q6AJT3 Related to flagellar hook protein (FlgE) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJT3_DESPS Length = 566 Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 138/256 (53%), Gaps = 26/256 (10%) Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY----TQDSS----D 217 ++ F + ++ SV +FDS GN H +S YF KT DN W Y +D S D Sbjct: 317 SICTFDYKDPKTFTYSASVQIFDSLGNPHLISTYFRKTDDNTWDTYYSLEKEDGSVIPAD 376 Query: 218 PNSIAKTATTLEFNANGTLVDGA-----------MANNIATGAINGAEPATFSLSFLNSM 266 PN+I + T L F + G VD A I G NG+EP +++F ++ Sbjct: 377 PNAI--SLTQLRFGSEGQPVDSAGLPLDGPPTATTEEPIDWG--NGSEPTPITVTF-DTT 431 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q N+ ++ +++ QNGY G+L I++ G V+ YSN + + + I LA F N GL Sbjct: 432 QFNS-SSKVISQEQNGYGAGNLSGVNIDEGGNVIAAYSNGKNRNIAAISLAKFQNPAGLT 490 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 EG+N+++AT +SG +G G G + +LE SNVD+S E V MI QR YQ+N++ Sbjct: 491 MEGNNLFAATGTSGAPRVGLPGP-ELGKVFTNSLEQSNVDMSVEFVRMITIQRGYQANSK 549 Query: 387 TIKTQDQILNTLVNLR 402 I T D++L L+NL+ Sbjct: 550 IITTVDELLGELINLK 565 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 38/272 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A VSGLN + VIGNN+AN+ T +K F+D+ + S +VG GV Sbjct: 6 ALYTGVSGLNTNGQAMTVIGNNLANTNTIAYKGSRTMFSDLLSSSVTGSGGTSQVGRGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDENRNLVNMQ 112 ++ + DF+ GT +T GLD+AI N FF L SN S+ YSR G FK +E LVN Sbjct: 66 LSRVDNDFSQGTFESTSSGLDLAIEGNSFFLLSPSNDQSIHYSRAGSFKFNEGGYLVNPG 125 Query: 113 GLQLTG--YPATGTPPTIQQGANPTNISIPNT-LMAAKTTTTASMQINLNSSDPLPTVTP 169 GL++ G Y A G G +P++I + ++ T+ M NL+S+ + + Sbjct: 126 GLRVQGIAYGADGE----LAGGDPSDIFLDGAGMIKGAATSEMIMNTNLDSNAKIFPID- 180 Query: 170 FSASNADSYNKKGSVTV---------FDSQGNAHDMSVYFVKTGDNNWQVY--------- 211 F ASN +SYN +T+ + Y+ KT +N+W+ Y Sbjct: 181 FDASNTNSYNFSEELTLTGPATVPATVPPSNSTITAQTYYRKTAENSWECYYTAKETMAD 240 Query: 212 -TQDSSDPNSIAKTATTLEFNANGTLVDGAMA 242 T SS SI A +E +A G LVD + A Sbjct: 241 GTAGSSTAASIK--AGEVEIDAAGNLVDTSSA 270 >UniRef50_Q2KCE1 Flagellar hook protein n=27 Tax=Alphaproteobacteria RepID=Q2KCE1_RHIEC Length = 434 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 136/435 (31%), Positives = 207/435 (47%), Gaps = 49/435 (11%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG----LGVKVAGITQDF 61 AVSG+NA A L + +NIAN T G+K+ + SF+ + S G GV+ + + Q Sbjct: 10 AVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGVQTS-VRQAV 68 Query: 62 TD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 +D G + T D+AIS +GFF + +G+ +R G F+ D+ NLVN G QL GY Sbjct: 69 SDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQLMGYS 128 Query: 121 A-TGTPPTIQQGAN---PTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 +G P + G + P N++ + A +T+ + NL+S + V P + +A+ Sbjct: 129 YDSGAPAVVVNGFDGLVPVNVN--QEGLTAIASTSGVFKGNLDSGANIAPVAPATLPSAN 186 Query: 177 SYN-----KKGSVTVFDSQGNAHDMSVYFVKTG----------DNNWQVYTQDSSDPNSI 221 + KK S+ +D GN YF KT + W+V ++D + Sbjct: 187 AATTTADTKKFSMVAYDHLGNKVMYDFYFTKTSVVTPPPATGTASTWEVAVFRNADAATG 246 Query: 222 AKTATT-------------LEFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQ 267 T+ L F+ NG ++ G GA+ A+ S++ S Sbjct: 247 GTTSFPYTGGAGAVVASGNLTFDRNGKMLTG--------GALPIADTKNALSINMDLSGF 298 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 GA T NG + I+ DG V Y + T+ L +I LAN A+ + L Sbjct: 299 TQLGAAFAGTGTPNGQAASPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTL 358 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 NV+SA SGV + G T GT+ +GALE SNVDL+ EL MI AQR+Y +N++ Sbjct: 359 MSGNVYSANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKV 418 Query: 388 IKTQDQILNTLVNLR 402 +T I++ LVNL+ Sbjct: 419 FQTGSDIMDVLVNLK 433 >UniRef50_C2PD26 Flagellar hook protein FlgE n=1 Tax=Bacillus cereus MM3 RepID=C2PD26_BACCE Length = 441 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 134/458 (29%), Positives = 206/458 (44%), Gaps = 80/458 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-------------FAGS-- 46 A +++G++A L V NNIAN+ T G+K A F D+ +AG+ Sbjct: 4 ALYTSITGMSATQNALSVTSNNIANAQTAGYKKQKAIFDDLLYNNTVGSRGDGSYAGTNP 63 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDE 104 +G G+K +G DF+DG+ T TG ++ AI NG F + D NG +V Y+R G F + Sbjct: 64 KSIGNGLKFSGTATDFSDGSITLTGEKMETAIEGNGLFLVGDRNGGNVEYTRKGSFGVSA 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQ---GANPTNISIP-NTLMAAKTTTTASMQINL-- 158 + + G + GY G P Q+ + P+ I +P T + T A++ NL Sbjct: 124 DNFITATGGQYVLGY---GVKPGTQEVDFSSQPSAIKLPVGTAIGGSVTDKATLGGNLSR 180 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVYT 212 N SD L T T++D +GN + + + GD Sbjct: 181 NQSD-LST----------------DFTIYDDEGNKITLRMDIKQNTKKETVGDKEIDTPI 223 Query: 213 Q-----------DSSDPNSI--------AKTATTLEFNANGTL--VDGAMANNIATGAIN 251 Q DS + A ++F+ G L +D + + T I Sbjct: 224 QGEYTYTFSMRNDSKNEKEFKPVLGENDAPITKNMKFDKAGKLERLDEDVQRDPNTKEI- 282 Query: 252 GAEPATFSLSFLNS-MQQNTGA-------NNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 + T + F N ++ N G I AT G Y I+D G V+ Y Sbjct: 283 -TQGGTIKIPFANQNLELNLGGLTNYPTGKTITATDVAGRPAAIANDYSISDGGFVMMRY 341 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 S+ +++GQ+ +A F N+ GL G+ + AT SSG+ +G AG G + GA E+S Sbjct: 342 SDGSMKVVGQLAVATFPNSGGLMKSGNGNYIATPSSGIPAIGVAGENGAGNVRGGAKESS 401 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 NVDLS E V++++ QR +Q NA+ IK D++LN +VNL Sbjct: 402 NVDLSVEFVDLMLYQRGFQGNAKVIKVSDEVLNEVVNL 439 >UniRef50_C5SQ30 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ30_9CAUL Length = 459 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 136/457 (29%), Positives = 218/457 (47%), Gaps = 70/457 (15%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFA------------DMFAGSKVGLGVKV 54 VS L+A +T L I NNIAN T +KS + SFA + L + Sbjct: 11 VSALSANSTALAAISNNIANVNTTAYKSVSTSFAANVSSSGSSTYSSGGVSASTALSITE 70 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFKLDENRNLVNM 111 AG Q TTT++ LD+AI +GFF + D +G +Y+R+G F +++ LVN Sbjct: 71 AGALQ-----TTTSS---LDLAIDGSGFFVVSEGADGSGGSYYTRDGSFSVNDEGYLVNS 122 Query: 112 QGLQLTGYPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP-----L 164 G L G+ A +G ++ + I IP + TT+ S+ NLNS+ Sbjct: 123 SGYYLQGWQADSSGNVTAASSVSDLSAIKIPTSSDTPTATTSISLAANLNSATEAYAGEY 182 Query: 165 PTVTPFSASNADSYNKKG-------SVTVFDSQGNAHDMSVYFVKTGD-NNW--QVYTQD 214 T S +N D + G ++V DS G H +++ +K+ N W ++++ D Sbjct: 183 DISTGLSMANYDEDEETGVEPDFEIGISVSDSLGKEHTLTLSVLKSETTNEWTAELWSDD 242 Query: 215 SS----DPNSIAKTATTLEFNANGTLVDGAMAN------------NIA-----TGAIN-- 251 + +I K+ T + FN +GTL + ++A +IA TGA+ Sbjct: 243 VTGGYGSEGNIIKSGT-ITFNEDGTLNEDSLAAFFGAEDLSQIKIDIAASSDETGALRWT 301 Query: 252 ---GAEPATFSLSFLNS---MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSN 305 GA + SLSF ++ + Q + + + +G DL I DDGTV Y + Sbjct: 302 SETGAAAQSLSLSFDDTQGGLTQYATTSEVKSIKADGTVFSDLSDVTIADDGTVNAIYED 361 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 +++L QI +A F N GL ++ NV++ + SG L T G+G G L + +LEAS V Sbjct: 362 GTSRVLAQIPVATFVNANGLTAKSGNVYALSSESGSYTLRTPGSGGAGLLASSSLEASTV 421 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 DLS E ++I QR Y + ++ I T D+++ T++ + Sbjct: 422 DLSSEFTSLITIQRAYSAASKIITTSDEMMQTVIESK 458 >UniRef50_A7GVS8 Flagellar hook protein FlgE n=2 Tax=Campylobacter RepID=A7GVS8_CAMC5 Length = 819 Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 93/239 (38%), Positives = 140/239 (58%), Gaps = 27/239 (11%) Query: 186 VFDSQGNAHDMSVYFVKTGDNN-----WQVYTQDSSDPNSIAKTAT--------TLEFNA 232 ++DS G+ H +S+ + KTG N W + Q +P I + +L FNA Sbjct: 585 IYDSLGSKHTVSIKWAKTGTTNDGGTEWSMIIQ-VPEPAKINYSGEGPDNVITGSLRFNA 643 Query: 233 NGTLVDGAMANNIATGAINGAEPAT-FSLSF--------LNSMQQNTGANNIVATTQNGY 283 NG+L A T A NG++ SL+F L S +++ +I +Q+GY Sbjct: 644 NGSLASFHPATFTFT-ANNGSQAGQNVSLNFGLGTDFNGLTSFDKDSSTESI---SQDGY 699 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L +I++ GT++G ++N ++ L Q+ LA F NNEGL SEG NV+S T +SG A+ Sbjct: 700 TGGTLRDIKIDETGTIIGAFTNGKSFGLAQVALATFTNNEGLQSEGGNVFSQTANSGEAV 759 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G AGTG+ GT+ LEASNVDLS+ L ++IV QR +Q+N++TI T D++LNTL+ L+ Sbjct: 760 IGAAGTGDKGTVAASKLEASNVDLSRALTDLIVIQRGFQANSKTITTSDEMLNTLLQLK 818 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 24/200 (12%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL A +DV GNNIAN TYG+K A+FAD+ + + ++G Sbjct: 9 VSGLQAHQIAMDVEGNNIANVNTYGYKYNRANFADILSQTPRVATAPQGELGGQNPMQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNL 108 LG + T+ F+ GT T+T + D+A+ NGFF + G+ +Y+RNG F D+ N Sbjct: 69 LGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFIVSPDGGTTRYYTRNGDFVRDKAGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNSSDPL--- 164 VN G + G+ TI NI I L A+ TT ++ NL+S + + Sbjct: 129 VNNSGHIVQGWTRDEETGTIDSTGPIKNIVIKEGLTTPARATTEVKIKGNLDSGNTIGAR 188 Query: 165 --PTVTPFSASNADSYNKKG 182 P + S + YN G Sbjct: 189 STPIYSLDSVAGGRDYNNNG 208 >UniRef50_C5CYE8 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYE8_VARPS Length = 395 Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 119/412 (28%), Positives = 186/412 (45%), Gaps = 43/412 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGS------KVGLGVK 53 ++GL + L VI NN AN T GFKS + FADMF GS +VG G+ Sbjct: 9 MTGLLGYSRGLRVIANNTANINTPGFKSSSLQFADMFYSGGNLGGGSTSQNRDQVGFGLS 68 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV-NMQ 112 AG + F G TG LD+A+ G F L D+NG Y+R GQFK D + LV + Sbjct: 69 TAGTSLSFKQGELRQTGNDLDMAVDGQGLFALQDANGKTTYTRAGQFKFDADGTLVSRVN 128 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNSSDPLPTVTPFS 171 G ++ G G I++ +M+ + T+ NL Sbjct: 129 GEKVMGLDDRG---------GLVAITLAGQMMSLGRPTSRVEFSGNL------------- 166 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYF-VKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 SN + G + V D+ G +H +++ F V + + + + ++ T + Sbjct: 167 -SNTVTEQTIGGIAVVDASGASHTLTMKFSVVSAAQSGTTMKVELMEGTTVVSTGQMVFV 225 Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 T A A A G P +L F + + G ++ +Q+G PG L Sbjct: 226 GGKPTP---ETAKLQAAYAPAGQPPMALTLDFSSDVVLFAGQTSLKVDSQDGIGPGALSG 282 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 + DG + NYSN T ++ LA F + + + S GDN + + LG AG G Sbjct: 283 TTFDADGNLTLNYSNGSTVKGARLALARFDSPDAVGSLGDNQFEQLDENAWH-LGVAGEG 341 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG ++ G +E SNVDLS+E ++++ QR YQ+++Q I T + +L L +++ Sbjct: 342 AFGKVSAGRVEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQELFSMK 393 >UniRef50_Q5FS48 Flagellar hook protein FlgE n=2 Tax=cellular organisms RepID=Q5FS48_GLUOX Length = 411 Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 127/426 (29%), Positives = 202/426 (47%), Gaps = 49/426 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG-----LGVKVAG 56 A AVSGLNA + + NNIANS T G+K+ T SF D +++ L VA Sbjct: 7 AVHTAVSGLNAQSHAFTDLSNNIANSQTTGYKASTTSFEDYVTNNELANDGESLSDSVAA 66 Query: 57 ITQDFTD--GTTTNTGRGLDVAISQNGFFRLVDSNGSV-----------FYSRNGQFKLD 103 T+ TD T + +AIS NGFF +V + G +Y+RNG F D Sbjct: 67 TTRQHTDNQCMVTTSTNSTALAISGNGFFNVVQATGQSNDSTPVLGTQQYYTRNGDFSQD 126 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 +N LVN G L GY T T+ G + + I +P+T+ T +T Sbjct: 127 KNGYLVNTSGYYLEGYNVDATSGTL--GTSLSAIQVPSTIAFRPTEST-----------K 173 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 L +S++ + + S T +DS G A + + + K D W V +D +D + Sbjct: 174 LTATGTLDSSSSKTVDM--STTAYDSTGAASTVDLSWTKLSDTTWAV--KDVNDTTGTSN 229 Query: 224 TATTLEFNANG-----TLVDGAMANNIATGAIN---GAEPATFSLSFLNSMQQNTGANNI 275 +AT + F+++G T D A++ ++ + N + T SLS + G+ N Sbjct: 230 SAT-VTFDSSGAVSSVTSQDSTGASSTSSSSFNYTGSPQDMTVSLSGVT-----LGSANT 283 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 V+ T + G + DG+V+ + N +QL+ +I L FA+ L+++ ++A Sbjct: 284 VSMTSDSVTTGTFSGISMETDGSVMATFDNGYSQLVAKIPLTTFADPNSLSAQNGQAYTA 343 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG + T GTLT G++E S DL+ +L +IVAQ+ Y +N + + T DQ+L Sbjct: 344 TSQSGSPQINAVNTNGAGTLTTGSIEESTTDLTGDLSKLIVAQQAYGANTKVVSTADQLL 403 Query: 396 NTLVNL 401 T + + Sbjct: 404 QTTLAM 409 >UniRef50_A9KNF2 Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNF2_CLOPH Length = 479 Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 143/474 (30%), Positives = 217/474 (45%), Gaps = 82/474 (17%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------------AGS---K 47 VSGL T +DVIGNNI+N T GFK+ +A+F+D+ AG+ + Sbjct: 9 VSGLRVHQTKMDVIGNNISNVNTVGFKASSATFSDILYQTTKSASGPNPNTGTAGTNAMQ 68 Query: 48 VGLGVKVAGITQDFTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR 106 +GLG +A IT T G + T D+ I +GFF + + G+ F+++ G F +D Sbjct: 69 IGLGANLASITASITKTGGSQRTDNPFDLMIEGDGFFVVNNGVGN-FFTKAGSFNVDAAG 127 Query: 107 NLVNMQGLQLTGYPATGTPP--TIQQGANPTNISIPNTLMAAKTTTTA--------SMQI 156 L G + G+ + P T+ +P I P L +A TT SM Sbjct: 128 TLCTPTGATVMGWQPSREDPRKTVPGSVSPLRIMSPENLYSAPEATTDIYLHGNIDSMDT 187 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV----YFVKTGDNNW--QV 210 NL SS F + +SY + V + S+ + D V + K GD+ + +V Sbjct: 188 NLTSSTGRIVNMSFFDNLGNSYTAE--VKIKQSEDSKSDYKVTIQNIYDKKGDSIFAKKV 245 Query: 211 YTQDSSDPNSIAKTATTLEF---------NANGTL-VD---------GAMANNIATG--- 248 D+ D A T F N +GT+ VD GA N ++ G Sbjct: 246 VDPDTGDITYEASNITDFNFGNGTGSVTVNDDGTIEVDCDEIDLKFNGANGNFVSVGDDA 305 Query: 249 --------AINGAEPATFS---LSFLN-SMQQNTGANNIVAT-------TQNGYKPGDLV 289 +N A+P F + F + +M N+G + +T T G G++ Sbjct: 306 DNATSIKFKVN-ADPDPFKDVNIDFSSITMYNNSGTTTVESTKGAKADGTGAGKAAGNMS 364 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG-VALLGTAG 348 I+ G + G Y N +LLGQ+V+A F+N GL + G+N++SAT +SG +G Sbjct: 365 GISIDQQGMIFGTYDNGDRKLLGQVVVATFSNPAGLEAIGNNMFSATPNSGEFNGVGEDI 424 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T + G G LE SNVDLS++ MI QR +Q+N++ I T D +L L+NL+ Sbjct: 425 TSSGGKFITGVLEMSNVDLSQQFTEMITTQRGFQANSRIITTSDTLLEELINLK 478 >UniRef50_Q07TK1 Flagellar basal body FlaE domain protein n=8 Tax=Bradyrhizobiaceae RepID=Q07TK1_RHOP5 Length = 421 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 127/432 (29%), Positives = 206/432 (47%), Gaps = 52/432 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-----GVKVAG 56 A S A+S LN+ + +L +I +NIANS T G+K+ +A F + S GV V Sbjct: 6 ALSSAISALNSQSQSLAMISDNIANSQTVGYKTTSALFDSLVTSSSSASSYSSGGVTVLS 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNMQGL 114 + + G T T D+ IS NGFF + + GS Y+R G F +D++ +VN G Sbjct: 66 KSNISSQGLLTTTTSSTDIGISGNGFFPVSTALNGGSTLYTRAGSFTIDDSGYMVNASGA 125 Query: 115 QLTGYP---------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L G+ TG+ + P + +I T +A T TT ++ + Sbjct: 126 YLLGWRTDADGNVVGGTGSGDLV-----PIDTNIAATSGSATTETTVALNL--------- 171 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV------YTQDSSDPN 219 P A+ D++ S+ ++DS G A+ M + + KT DN W T DS+ Sbjct: 172 ---PADAAVNDTFTS--SMPLYDSLGTANSMQITWEKTADNTWTASVANPTLTSDSTKTT 226 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIA-TGAINGAEPATFSLSF-----LNSMQQN---- 269 A T+ FN++G+L + + +G GA +T +L ++ + Q Sbjct: 227 GTASGTITITFNSDGSLKSTSSPTAFSVSGWTTGAANSTITLDLGTIGGIDGLTQKSSGS 286 Query: 270 -TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 T A ++ + +G G L S + DDG V YSN T L +I +A FA + L + Sbjct: 287 TTPAIDLTSIESDGSAYGKLSSVAVGDDGKVNATYSNGTTISLYKIPVATFAAPDQLQVK 346 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 + +++AT SG A++ +G+ GT+ G LEAS D + E NMI AQ+ Y + +Q I Sbjct: 347 SNGLYAATADSGTAIVQQSGSNGAGTIQGGKLEASTADTNTEFSNMISAQQAYSAASQVI 406 Query: 389 KTQDQILNTLVN 400 +++ +TL++ Sbjct: 407 TAVNEMFDTLIS 418 >UniRef50_D1U447 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U447_9DELT Length = 535 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 142/535 (26%), Positives = 220/535 (41%), Gaps = 134/535 (25%) Query: 1 MAFSQ---AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA------------- 44 M+FS +G+ A + V+ NN+AN +T GFK A F D+ + Sbjct: 1 MSFSSLYVGATGVVAHGERMQVVANNLANVSTIGFKKADALFGDLMSSQLGYGGGQFESG 60 Query: 45 ---GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-----GSVFYSR 96 S++G GV ++ I F +G NT D+AI+ NGFF + D+ G+ Y+R Sbjct: 61 SSYASQMGQGVSMSAIRTVFAEGGLENTTTTTDLAITGNGFFGVRDTTAGGTMGASHYTR 120 Query: 97 NGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLM----------AA 146 G F+ + + LV+ +L GY + + + + ++ Sbjct: 121 AGSFRFNNDAYLVDPHDFRLQGYAVDRETGVVATQVSDVQLPYEDVVIDGQPVRLVRSQP 180 Query: 147 KTTTTASMQINLN-------SSDPLPTVTPFSASNADSYNK---------KGSVTVFDSQ 190 + TT M NL+ SS P A N S +K ++T++D+ Sbjct: 181 RATTDVEMVTNLDAVATEQYSSATNPFFAMLEAYNGSSGSKPFGENLPAYSSALTIYDAD 240 Query: 191 GNAHDMSVYF----------VKTGDNNWQ--VYTQDSSDPNSIAKTAT-------TLEFN 231 GN H+M+VYF G + W+ V SSD + T+ L FN Sbjct: 241 GNEHEMTVYFDPVNASSLSNAAPGYSYWEYLVALPGSSDGSGAYGTSAAGLAGMGVLTFN 300 Query: 232 ANGTLVDGAMANNIATGA----INGAEPATFSLSFLNSMQQNTGANNIVATTQN------ 281 +G LV G A ++ GA ++ PATF+L + G+N T+ Sbjct: 301 GSGQLV-GQSAYSLTGGADGKNLSNWAPATFNLDGEPQVSFTFGSNGAAIGTEQLVSYDF 359 Query: 282 -------------------GYKPGDLV---------------------SYQIND------ 295 G G+LV +YQI D Sbjct: 360 GLTSTTSTWLSGAATAAGVGLNVGNLVQMANEARDARITTSYDQSSFTAYQIQDGFTWGY 419 Query: 296 --------DGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 DG + G +SN QT+ Q+ FA+ GL +G N + AT +SG A+ G A Sbjct: 420 LLNTSVDGDGFLSGYFSNGQTEEFYQVANYRFASEWGLRRDGGNNFVATDASGAAMDGKA 479 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G+ LE SNVD+++E +MI+ QR YQ+N + I T D +LNTL++++ Sbjct: 480 LVGGRGSFVQNTLEMSNVDMAEEFASMIITQRGYQANTKVITTSDSLLNTLISVK 534 >UniRef50_Q48GC1 Flagellar basal-body protein, putative n=6 Tax=Pseudomonas syringae group RepID=Q48GC1_PSE14 Length = 586 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 145/258 (56%), Gaps = 25/258 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F+ A+SG++AA L+V GNNIANS T GFKS A F+ +++ S+ VG GV+ Sbjct: 1 MSFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVR 60 Query: 54 VAGITQDFTDGTT-TNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 +A + Q+F G + T +G LD+ I NGFF +V GS+ Y+R G F D +V+ + Sbjct: 61 LASMQQNFNQGESMTTSGNPLDMRIQGNGFF-VVSDGGSLAYTRAGAFLKDAANFVVDSE 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP-LPTVTPFS 171 G +L GY A I++G T++ I + ++A+ TT + INL++S P L + F Sbjct: 120 GGRLQGY-AANEQGEIKRGLR-TDLQIDTSNVSARATTRVAENINLDASLPSLARLPVFD 177 Query: 172 ASNADSYNKKGSVTVFDSQGNA---------HDMSVYFVKTGDNNWQVYT----QDSSDP 218 ++ +Y + T+ D+ A H++ YFVKTGD+ W +Y ++ DP Sbjct: 178 PADPATYTRAVGRTIQDAGSGAGATAVPASDHELKQYFVKTGDSQWSMYVLIDGRNPVDP 237 Query: 219 NSIAKTATTLEFNANGTL 236 NS+A TLE NG+L Sbjct: 238 NSVAPLHVTLEQRPNGSL 255 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/268 (31%), Positives = 135/268 (50%), Gaps = 35/268 (13%) Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT---------Q 213 P+P P S+ +Y+ + +FDSQGN H++ YFVK G N+W+++ Sbjct: 320 PVPAFDP---SDLKTYSDMFANAIFDSQGNQHELKQYFVKDGTNSWRIHALIDGRNPQMP 376 Query: 214 DSSDP-------------NSIAKTATTLEFNANGTLVDG---AMANNIATG----AINGA 253 DS+DP S+ ++NG + G AM TG NGA Sbjct: 377 DSTDPLTANIVFDSGGWVQSLTGGPGFASTHSNGLQLTGWTPAMPAERVTGPEKWVPNGA 436 Query: 254 EPAT--FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 + ++ F N +Q N A++ +T +G+ G L S + DG + ++N + + Sbjct: 437 AGSAKGITIDFTNLLQHNA-ASSRSSTHVDGHAAGQLSSLSVGRDGILRAGFTNGMNKNI 495 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 GQ++LA+FAN +GL + D W+ + SGVA +G G G+L LE SNV L+ EL Sbjct: 496 GQVILASFANPQGLQARSDTRWTESADSGVADYDVSGVGTLGSLIGDGLEGSNVVLADEL 555 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLV 399 + +I AQ YQ+N++ I T+ ++ TL+ Sbjct: 556 IALIQAQTAYQANSKAISTEATVMQTLI 583 >UniRef50_Q12T69 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T69_SHEDO Length = 392 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 124/410 (30%), Positives = 193/410 (47%), Gaps = 41/410 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--KVGLGVKVAGITQ 59 AF +SGLN+ + NLD + NNIAN T G++ G SF G K GLG +++G+ Sbjct: 4 AFYTGLSGLNSYSKNLDNVSNNIANMNTAGYR-GMDSFYQALGGDSDKPGLGAQISGLGY 62 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G TG D+AI+ GFF L+D VFY+R GQF+ D+N LV+ TG+ Sbjct: 63 RFSVGDIRQTGNDFDLAITGTGFFALLDGE-KVFYTRTGQFEFDQNNVLVDKN----TGF 117 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 G I + I++ + A K T T + + N S PL D + Sbjct: 118 KVAG----IDSNGQLSEINLL-SYQAIKPTATTKLSLTGNLS-PL-----------DDVH 160 Query: 180 KKGSVTVFDSQGNAHDMSVYFV---KTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGT- 235 + S + +S G D+S+ F T N W+V + D I + +++F +GT Sbjct: 161 QISSAKMINSLGEEVDLSIKFTNEKATFPNQWKV---EILDDKGIVLHSDSVKFGPDGTP 217 Query: 236 -LVDGAMANNIATGAINGAEPATFSLSFLNSMQ-----QNTGAN-NIVATTQNGYKPGDL 288 + G+ N+A + N P ++ + TG + N+ +G G L Sbjct: 218 EVGSGSFIFNLADSSGN-TTPIDITVGTIGDFSAVTQTSATGVDSNVTLHAVDGKGVGQL 276 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 V + G V NYSN I + +F + L+ E V+ A+ +LG AG Sbjct: 277 VKRSFDPQGRVTLNYSNGDKVTPFTIAMVDFDDISTLSIESGTVFKASDLES-RVLGKAG 335 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 G F L ++E SNVDLS+E +M+V QR YQ++++ + +Q++ L Sbjct: 336 EGRFKQLATSSIEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQL 385 >UniRef50_Q89F43 Flagellar hook protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89F43_BRAJA Length = 410 Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 132/430 (30%), Positives = 194/430 (45%), Gaps = 65/430 (15%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG------------LGVKV 54 VSG++A + L + +NIAN T G+K + F+ + S G + Sbjct: 11 VSGMSAQSNKLSTVSDNIANVNTTGYKRASTEFSSLILKSGSGNYDSGAVETTVRYAISD 70 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLDENRNLVNMQG 113 AG TQ FT TT D+A+ NGFF + ++N + Y +R G F D NLVN G Sbjct: 71 AGHTQ-FTTSTT-------DLAVQGNGFFVVSNANNTQQYLTRAGSFVPDAQGNLVNAAG 122 Query: 114 LQLTGYPATGTPPT--------IQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L G P T + I A + + +P+T A T TT ++ DP Sbjct: 123 YYLLGQPGKVTNFSQNSLSGMQIVNIAQVSQVPVPST---AGTLTTGNL-------DPKA 172 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----GDNNWQVYTQDSSDPNSI 221 V A SY+ K S+ +++ G A + VY T G + WQ+ +S+ S+ Sbjct: 173 AVIAGPPGPA-SYSSKSSIVAYNNIGQAVTLDVYMSHTATAAGSDTWQIQAYNSATGTSV 231 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF---------LNSMQQNTGA 272 T GA+ A P T S + L++M Q TG Sbjct: 232 GAATTFTF-----------DTTATGKGALAAASPTTLSFTVPGGAAVTMDLSNMTQ-TGT 279 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 + T NG P + ++D G V N Q L I+LA+ + + L E NV Sbjct: 280 DFSFKATVNGSAPAAIDKVDVDDAGHVTAILKNGQQMTLYTIMLADVPSPDNLTPEPGNV 339 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 +S +SG A G AGTG GT+ +GALE SNVDL+ EL MI AQR + +N+++ +T Sbjct: 340 YSTNMNSGNAQAGNAGTGGLGTIQSGALEDSNVDLADELTGMIEAQRGFTANSKSFQTGA 399 Query: 393 QILNTLVNLR 402 +L+ +VNL+ Sbjct: 400 DLLDVVVNLK 409 >UniRef50_Q6LW64 Hypothetical flagellar hook protein FlgE n=1 Tax=Photobacterium profundum RepID=Q6LW64_PHOPR Length = 472 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/241 (38%), Positives = 141/241 (58%), Gaps = 11/241 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA---GSKVGLGVKVAGI 57 M+ + +SGL A + ++ I +NIAN T G+KS F D++A G GV+VA I Sbjct: 1 MSMNIGMSGLIATSEQMNSISHNIANVGTAGYKSSRTEFQDIYAPEFGGGEMNGVEVAAI 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 Q F +GTTT TGR D+AI+ GFF +V++ G ++RNG F LD++ NLV G L Sbjct: 61 RQSFKNGTTTPTGRNGDLAINGEGFF-MVENKGQQMFTRNGVFNLDKDGNLVASDGSHLQ 119 Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSASNAD 176 GY TGT IQ G T++++ M A+++T +M++NL++ S + TPF + Sbjct: 120 GYGVTGTG-QIQTG-TITDLTVETGDMPARSSTKVNMEVNLDANSLAIVPKTPFDPEDPS 177 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-YTQDSSDPNSIAKTATTLEFNANGT 235 ++ + TV+DS G H+++ Y+VKT DN W V Y D D + KTA ++ F++ G Sbjct: 178 TFTSSATTTVYDSLGAEHEVTQYYVKTADNAWDVHYLID--DEKTATKTA-SMAFDSEGK 234 Query: 236 L 236 L Sbjct: 235 L 235 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 96/184 (52%), Gaps = 18/184 (9%) Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN 274 S+DP + A A L F N +G+ I + AE F F Sbjct: 303 SADPIAAATVAVDLAFTPN----NGSANQTIK---FDVAETTQFGKEFA----------- 344 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 I +Q+G+ PG + + DG V YSN QT++ GQ+ LA F N EGL G+ W+ Sbjct: 345 ITKNSQDGHAPGQVAGWYFEGDGRVFARYSNGQTKVQGQVSLARFPNQEGLQQAGNTRWT 404 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 + SSG AL+G AGTG G + G E SNVDLS E+VN++ AQ NYQ+NA+TIK ++ Sbjct: 405 QSFSSGAALVGAAGTGQLGNVRTGMYENSNVDLSSEMVNLMSAQSNYQANAKTIKVAQEM 464 Query: 395 LNTL 398 L Sbjct: 465 TQIL 468 >UniRef50_A6W1A3 Putative uncharacterized protein n=2 Tax=Marinomonas RepID=A6W1A3_MARMS Length = 565 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 153/289 (52%), Gaps = 29/289 (10%) Query: 137 ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 +++ TL A T T + + +SS + + F N D+Y+ + T +DS G +H + Sbjct: 283 LAVSGTLGGAAITATLTPEEIRDSS--IVSREAFDPLNPDTYSYGNTRTTYDSLGESHTL 340 Query: 197 SVYFVKTGDNN-WQVY-TQDSS----DPNS-----IAKTATTLEFNANGTLVDGAMANNI 245 YF+K G+NN +++ T D DP + + T + F+A G L+ + I Sbjct: 341 GYYFIKQGENNTYELRVTMDGEESFVDPTTGEDARYLEKNTAVSFDAAGNLM--GVYRGI 398 Query: 246 ATGAINGAEPATFSLSFLNSM-QQNTGANNIVATTQ-----------NGYKPGDLVSYQI 293 + I +P + ++ ++ ++ +TQ NG+ G+L Sbjct: 399 SPLGIE--QPVPLEVRGIDPTNRERITQLDLAGSTQFALANTDTFEQNGFSAGELQGVSF 456 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 + DG ++ NY+N+QT LGQI LA F + +GL G +W AT++SG A +G + G Sbjct: 457 DSDGLLIANYTNQQTATLGQIALATFDSTDGLMPSGHTMWVATKTSGPADIGRPNSATLG 516 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + GALE SNVDL+ ELV +I AQRNYQ+N++T++T++ + T++NLR Sbjct: 517 KIAGGALEESNVDLTAELVALIEAQRNYQANSKTLETENTVTQTIINLR 565 Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 38/290 (13%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF--------AGSKVGLGV 52 M F+ A+SG+ A+A L V GNNIAN+ T GFK F D++ +G+ +G GV Sbjct: 1 MGFNTALSGIKASADYLSVTGNNIANADTTGFKKSRIEFDDLYNTSVLGAGSGNNIGSGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 V+ ++Q+F+ G + T LD+AI +GFF ++D+ + Y+R G FKLDEN LV Sbjct: 61 SVSKVSQEFSSGNLSYTDNNLDLAIDGSGFF-VIDAGIANAYTRAGNFKLDENGFLVTNS 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS--SDPLPTVTP- 169 G + G+ A G N ++ IP + + TT+ +++NL+S D P + Sbjct: 120 GNNVQGFNAVDG----VVGGNLADLKIPTDRIPPEPTTSMGLKVNLDSKNEDVPPFIKAI 175 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--NNWQVY-------TQDSSDPNS 220 F ++ D+YN + V D G +H ++ Y+ K G+ N ++V+ T D+ P Sbjct: 176 FDPNDPDTYNFTQTQGVVDGNGQSHIVTYYYAK-GELPNTYKVHATVDGNLTDDAGLP-F 233 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNT 270 +A+T T GT +G +G E A FSL ++ + N+ Sbjct: 234 LAETYATFNTAEGGTDYNG-----------DGVEEAPFSLLYVGPNEPNS 272 >UniRef50_Q1YV97 Flagellar hook protein FlgE n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV97_9GAMM Length = 944 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 122/213 (57%), Gaps = 11/213 (5%) Query: 197 SVYFVKTGDNNWQVYTQ----DSSD-P--NSIAKTATTLEFNANGTLVDGAMANNIATGA 249 +VY +T D +W T DS+D P I L F+ +G+LV + + Sbjct: 735 TVYVTQTKDGDWTETTDGGEFDSNDVPYWTPIFLDKGELTFDTSGSLVSPVAGVKLESAG 794 Query: 250 INGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 I G + +L++ NS Q N+ ++++ +QNG GDLV I DDG VV +YSN + Sbjct: 795 ITGGD---ITLNYDNSTQFNS-PFSVLSQSQNGAPEGDLVGVNIGDDGLVVASYSNGSQK 850 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 LG+I+LANFA +GL GD + AT SG A LG G FGT+ GA E SNVDL+ Sbjct: 851 SLGKIILANFATPKGLRQVGDTSYYATSVSGDANLGEPGAAGFGTIRAGARERSNVDLTA 910 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ELV++I AQRN+Q+NA+ I+T + T++ +R Sbjct: 911 ELVDLITAQRNFQANAKAIETSSSLTQTIIQIR 943 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 122/226 (53%), Gaps = 17/226 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F +++GLNAA T L V NNIANS T GFK F D+FA S VG GV Sbjct: 1 MSFYTSLTGLNAATTQLAVTSNNIANSGTGGFKRSDTDFGDIFATSPLEKASSVVGRGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + ++Q+F+ G + LD+AI+ +GFF L S+G+ Y+RNG F L+E +VN G Sbjct: 61 LKEVSQEFSQGNIEFSANSLDLAITGDGFFPLESSDGTKIYTRNGAFMLNEQNQMVNSAG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 L P T G +P+ ++IP T+ TT + +NL S+ P F+ Sbjct: 121 QALQSLPVDSTNKA-DFGVDPSALTIPRATVSEFLPTTEVELGLNL-PSEVTPITATFNP 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-------NNWQVY 211 D+Y+K S+TV+ + G+A+ ++Y+VKT + N WQ Y Sbjct: 179 DKPDTYHKTTSLTVYGTSGSANLATIYYVKTANATAETPFNKWQTY 224 >UniRef50_D2M8A9 Flagellar basal body FlaE domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8A9_RHOPA Length = 422 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 129/428 (30%), Positives = 215/428 (50%), Gaps = 43/428 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGSKVGLGVKVAG 56 A S A+S LNA + +L +I +NIANS T G+K+ +ASF+ + A + GV V Sbjct: 6 ALSSAISALNAQSQSLAMISDNIANSQTVGYKTTSASFSQLVTAASGASTYSSGGVTVLA 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFF--RLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 + T G T T D+ IS NGFF + G+ Y+R G F LD + LVN G Sbjct: 66 RSNITTQGLLTTTTSSTDIGISGNGFFPVTTAVTGGTTLYTRGGSFTLDNSGYLVNASGA 125 Query: 115 QLTGYPATGTPPTIQQGANP-TNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L G+ T + GA+ T + I ++ A + T + + N P A+ Sbjct: 126 YLLGWR-TDADGNVAGGASADTMVPIDTSVAATSGSATTTTTVAAN--------LPADAA 176 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT------ 227 D++ S++++DS G A+ M + + KT +N+W T ++P + TAT Sbjct: 177 VNDTFTT--SMSLYDSLGTANSMQITWTKTAENSW---TATFANPTLASNTATATGTVSG 231 Query: 228 ---LEFNANGTLV--DGAMANNIATGAINGAEPATFSLSFLNS------MQQNTGAN--- 273 + FN++G+L + + A TG NGA + ++ + Q ++GA Sbjct: 232 SIAISFNSDGSLASTNPSPATISVTGWTNGAADSVITMDLGTAGGTDGLTQYSSGATTPA 291 Query: 274 -NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 ++ + +G G L S I DDGTV YSN +T + ++ +A FA + L ++ + + Sbjct: 292 VDLTSIESDGMAYGKLSSIAIGDDGTVSATYSNGKTTTIYKVPVATFAAADQLEAKDNGM 351 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 ++AT +SG A++ +GT G++ G LEAS D + E +MI AQ+ Y + +Q I + Sbjct: 352 YAATLASGTAVVQLSGTNGAGSIEGGVLEASTSDTNTEFSSMISAQQAYSAASQVISAVN 411 Query: 393 QILNTLVN 400 ++ +TL++ Sbjct: 412 EMYDTLIS 419 >UniRef50_A0NPJ1 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NPJ1_9RHOB Length = 463 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 133/465 (28%), Positives = 203/465 (43%), Gaps = 74/465 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + AVSGL A A L+ I N+ANS T G+K +F+D+ +G +V+G T F Sbjct: 6 AINSAVSGLAAQAKALENISGNVANSQTTGYKRLDTTFSDLVSGGGSKQAQQVSGTT--F 63 Query: 62 TDGTTTNTGRG----LDV----AISQNGFFRLVDSNGSV----------FYSRNGQFKLD 103 TNT +G +DV AI+ G+F + ++ V +Y+R G F+ D Sbjct: 64 ATSRATNTVQGDITSVDVDTYMAINGPGYFVVTKASDVVDGSTTFADETYYTRAGDFERD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQ-GANPTNISIPNTLMAAKTTTTASMQINL---- 158 + L+N G L G+P P T G NPT I I N +AA TT Q NL Sbjct: 124 KEGYLINSSGYYLQGFPLD--PNTGNAIGDNPTVIQIENQPLAASATTAVDYQANLPRVP 181 Query: 159 --NSSDPLPTVTPF-----------SASNADSYNKK---GSVTVFDSQGNAHDMSVYFVK 202 N D T A+ AD N GS+T+++ G A + V + K Sbjct: 182 ATNDYDGTDESTALLNATVGAGNVAVANEADFLNSSISGGSITIYNQNGTAMPVEVRYAK 241 Query: 203 TG---------DNNWQVYTQDSSDPNSIAKTATTLEFNANG---TLVDGAMANNIATGA- 249 T ++ W +Y D T++F+ G TL GAMA + G+ Sbjct: 242 TANYDAGPPVVEDAWTMYIGTGGDATDAWYDVGTIQFDDTGEMTTLTAGAMAGSAVNGSG 301 Query: 250 ---------INGAEPATFSLSF----LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 I G A SF L G + V+ Q+G+ G+L ++ Sbjct: 302 DGFTISSLTIGGTTAANVEFSFADGSLTQYSDKDGRASSVSLDQDGFPAGELTGVAVDAS 361 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G V+ +YSN Q + + QI LA F + L ++AT SG A L G + Sbjct: 362 GRVIASYSNNQQRPVYQIPLATFQAEQDLQRVDGAAFAATAGSGDADLSGG-----GQIL 416 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +E SN D++ E +I+ Q+ Y +N++ + + D++L+ +N+ Sbjct: 417 AKKVELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDDALNM 461 >UniRef50_A7GNH9 Putative uncharacterized protein n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GNH9_BACCN Length = 467 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 138/463 (29%), Positives = 203/463 (43%), Gaps = 72/463 (15%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSK------------VG 49 ++SG++A L V NNIAN+ T G+K A F D+ G+K +G Sbjct: 8 SISGMSAMQNALSVTSNNIANAQTVGYKKQKAVFDDLLYNNTVGAKGDDTKAGTNPKSIG 67 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNL 108 GVK +G + D+ G+ T TG VAI NGFF + DS G+ V Y+R G F EN + Sbjct: 68 NGVKFSGTSTDYNGGSITMTGINGQVAIEGNGFFVVGDSQGNGVQYTRKGTFGKSENNYI 127 Query: 109 VNMQGLQLTGYP--ATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLP 165 VN +G + Y G P T A P ISIP + + + ++ S+ NL S D Sbjct: 128 VNGEGQYVLAYKLDEDGKPDT-SHPAGP--ISIPLGSAIDGEVSSKGSLIGNL-SRDNKK 183 Query: 166 TVTPFSASNADSYNKKGSVTV----------------------FDSQGNA-HDMSVYFVK 202 + F N N V + D +GN V Sbjct: 184 IIHDFPVFNKSGDNITMRVQIEQVTELVDPDLPIGADGKPILPKDDKGNPIKPEKVEKPV 243 Query: 203 TGDNNWQVYTQ-------------DSSDPNSIAKTAT-TLEFNA-NGTLV---DGAMANN 244 G + V T+ D P T T TLEF+ G L + + + Sbjct: 244 PGKYKYTVLTRNNSKNEKEFTPIADDKAPGEKKPTLTKTLEFDPITGKLTRTDEAVVRDP 303 Query: 245 IATGAINGAE---P---ATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 + I G + P TF L+ L+ + + + NG + Y+I+D+G Sbjct: 304 VTKEVIKGGQVDIPFGGDTFKLN-LSQLTNLPTKDTLDHKDVNGRAAAVAMDYKISDNGY 362 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 V+ YS+ T+ + Q+ +A F N +GL G+ + T S+G +G A G + G Sbjct: 363 VMVTYSDNSTRAVSQLAVATFKNQDGLMKVGNGNYVPTASAGDPFIGVAEQNGAGKIIGG 422 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A E SNVDLS E V++++ QR +Q NA+ IK D +LN +VNL Sbjct: 423 AQEGSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDDVLNEVVNL 465 >UniRef50_Q24T89 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24T89_DESHY Length = 383 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 89/430 (20%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGS-----------KV 48 A+SGL +DVIGNNIAN T GFK +F+ M AGS ++ Sbjct: 8 AISGLKNHQIKMDVIGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQGGTNPAQI 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLG V+ I Q T G++ +TG+ D+ I GFF L +NG YSR G F D++ L Sbjct: 68 GLGSMVSSIDQIMTPGSSQSTGKDTDMMIQGKGFFVL-QNNGETVYSRAGAFTQDDDGTL 126 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKT----TTTASMQINLNSSDPL 164 P TG ++ +T ++ TT +++ NL + Sbjct: 127 TE---------PGTGAKVMGHMYGMEKSVDTMSTTTEDESKIDWTTLEAIKFNLGEN--- 174 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 P+ S A +VK+GD W VY S+P+ I Sbjct: 175 ---PPYVLSEATKIPPDA-----------------WVKSGD-EW-VY----SNPSLIGVN 208 Query: 225 ATTLEFNANGTLVDGAMANNIA---TGAINGAEPA------TFSLSFLNSMQQNTGANNI 275 ATT T GA+ +N T + +PA TF+++ L+ + G + Sbjct: 209 ATT-------TAPTGAVFDNTRGTITVTTDPTKPADDTGIYTFTITNLDG-EYADGTDIP 260 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQ---TQLLGQIVLANFANNEGLASEGDNV 332 +AT L S+ ++ G + G YSN + ++++GQ+ +A+F+N+ GL + G++ Sbjct: 261 LAT---------LTSFSVDSKGAITGVYSNGEASASRVIGQVAIASFSNDAGLLNLGNSF 311 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 ++A+ +SG A +G AG G + +E SNVDLS+E +MIV QR +Q+N++ I D Sbjct: 312 YAASNNSGQASIGGAGEDGRGNIVPSTVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSD 371 Query: 393 QILNTLVNLR 402 +L L++L+ Sbjct: 372 SLLQELIDLK 381 >UniRef50_D1B6B8 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B8_THEAS Length = 636 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 150/296 (50%), Gaps = 20/296 (6%) Query: 124 TPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGS 183 T PT + G ++S L+AA + T + ++D L V A+ + N++ S Sbjct: 343 TVPTRRDGT--FDLSAATNLLAAAQSPTGNAVTVQATTDGLGLVVKDGATTVATLNQRLS 400 Query: 184 ------VTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN-SIAKTATTLEFNANGTL 236 + ++DS GNAH + V + K +N W+ S+P ++ + F + G Sbjct: 401 SVHTSKMDIYDSLGNAHTLEVSWEKIDNNQWRWRAFLPSEPGITMTDNTGVINFTSEGK- 459 Query: 237 VDGAMANNIATG-AINGAEPATFSLSF---------LNSMQQNTGANNIVATTQNGYKPG 286 ++G ++ A GAE +T L F + + Q A A Q+GY G Sbjct: 460 IEGVDTFDVTINFAALGAEDSTVRLDFSGRSFDKDAIEGVTQYGSAFTTKAYYQDGYPMG 519 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 L Y ++ DGTV G YSN Q Q L ++ LA FAN +GL E V+S + +SG+A + Sbjct: 520 VLQDYAVSSDGTVQGVYSNGQRQPLYKLALALFANPQGLFKESGTVFSQSANSGIAQIVK 579 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G + LE SNVDLS+E VN+IVAQR +Q+NA+ I T DQ+L L+NL+ Sbjct: 580 PMEGGAGRIMGSNLEMSNVDLSQEFVNLIVAQRGFQANARVITTSDQVLEELINLK 635 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 79/178 (44%), Gaps = 26/178 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----------AGS--------K 47 VSG+ T LDV+GNNIAN T GFK F D+ AG + Sbjct: 9 VSGVKGHQTYLDVVGNNIANVNTTGFKRSNVLFQDLLYQNVRGAMAPDAGQGRGGINPMQ 68 Query: 48 VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRN 107 VGLG V + T GT TG D IS +G+F +V + FY+R G +D N Sbjct: 69 VGLGSMVGAVETIHTQGTMQYTGNRNDFGISGDGYF-VVKTGADTFYTRAGSATMDSGGN 127 Query: 108 LVNMQGLQLT--GYPATGTP--PTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNS 160 LV M G+ GY + P PT +I+IP + A TT + NL+S Sbjct: 128 LV-MSGMGYIYQGYKMSKDPTDPTKYVEGPLGDINIPVGQKLEANKTTLGGYRCNLDS 184 >UniRef50_B9L651 Flagellar hook protein FlgE n=2 Tax=Nautiliaceae RepID=B9L651_NAUPA Length = 853 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 138/235 (58%), Gaps = 18/235 (7%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNN-------WQVYTQDSSDPNSIAKTAT-TLEFNANG 234 S+ VFDS G+ H ++++F KT + W+ Y + + P+++ + A ++FN +G Sbjct: 621 SIDVFDSLGSKHTLTLHFRKTHTSENPNDPTVWKWYAEVPA-PSTLDQPAYGYVKFNPDG 679 Query: 235 TLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVAT------TQNGYKPGD 287 + ++ ++ NG+ L F +M + G + A TQ+GY GD Sbjct: 680 S-INSYNPPSLIFNPNNGSSTGQAIQLDF-GTMGKFDGITSFEAPSATSGQTQDGYPGGD 737 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 L ++ GTV+G ++N ++ L Q+ +A F NNEGL SEG ++SA+ +SG ++GTA Sbjct: 738 LQQLVVDQTGTVIGVFTNGRSYSLAQVAIAKFVNNEGLMSEGGTLFSASPNSGEPIIGTA 797 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GTG G++ +LE SNVDLS+ L +IV QR +Q+N++TI T DQ+LNTL+ L+ Sbjct: 798 GTGGRGSIQPSSLEMSNVDLSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQLK 852 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 19/177 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGLNA +DV NNIAN T GFK +F ++ + + ++G Sbjct: 9 VSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTVKSATAPQGDLGGKNSLQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLDENRNL 108 LG V+ + F G+ NT + D+AI+ +GFF + G + Y+R G F D N N Sbjct: 69 LGTSVSAVETMFKQGSIQNTDKNTDMAINGDGFFVVSGDGGKTYRYTRAGDFTFDANGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDPL 164 V+ G + G+ A TI + ISIP L A T+ +++ NLNS D + Sbjct: 129 VDPNGYIVQGWLADPETHTIDTASGVKPISIPPGLTTPANPTSKIAIKANLNSGDHI 185 >UniRef50_Q485P3 Flagellar hook protein FlgE n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485P3_COLP3 Length = 554 Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 126/244 (51%), Gaps = 20/244 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SGLNAA +LDV NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGLNAAQKDLDVSSNNIANVNTVGFKESRAEFVDVYASSLLAAGKTKVGDGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRNLVNM 111 A + Q F+ G+ T LD+AI+ NGFF V GS+ Y+R GQFKL+ + +VN Sbjct: 61 TADVAQQFSQGSIQFTNNALDLAITGNGFFATVPELGSLETSYTRAGQFKLNSDNFVVNS 120 Query: 112 QGLQLTGYPAT--GTPPTIQ-QGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 QG L G+P G+ ++ A P I IP T+ +++NL + T Sbjct: 121 QGGHLLGFPVNPDGSSASVSLSTAEP--IRIPTESGTPTKTSEVDVRMNLPAGAGYITSA 178 Query: 169 P--FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----TGDNNWQVYTQDSSDPNSIA 222 P F + ++N SVT+FDS G +H M+ +FVK N W ++ P +A Sbjct: 179 PANFDPEDPLTFNSSTSVTIFDSLGKSHIMTYFFVKDDPAVAPNQWMMFASVDGKPIDLA 238 Query: 223 KTAT 226 T Sbjct: 239 DDPT 242 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 11/159 (6%) Query: 244 NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 N+ T N EP F+ +F + A Q+G G L +I DG V Y Sbjct: 407 NLDTAGPNPNEPTQFASNF-----------EVTALNQDGLAVGRLTGIEIGVDGLVRATY 455 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 SN +Q L +I + NFAN +GL+ G + W + SG AL G AG+G FGT+ + ALE S Sbjct: 456 SNGTSQPLSRIAMVNFANEQGLSQTGGSNWKESLVSGKALAGEAGSGTFGTINSSALEQS 515 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NV+L+ EL+++I AQRN+Q+N++ ++ +Q+ T++ +R Sbjct: 516 NVNLTTELIDLISAQRNFQANSRALEVDNQLNQTILQIR 554 >UniRef50_C4ZAN8 Flagellar hook protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAN8_EUBR3 Length = 477 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 135/476 (28%), Positives = 206/476 (43%), Gaps = 86/476 (18%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------------------GS 46 AVSGL T +DVIGNNIAN T FK+ + F+++ Sbjct: 8 AVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGASAGNGAAGTGGKNAK 67 Query: 47 KVGLGVKVAGITQDFTD-GTTTNTGRGLDVAISQNG---FFRLVDSNGSVFYSRNGQFKL 102 ++GLGVK + T G+ TG D+ ++ FF + D +F +R G F + Sbjct: 68 QIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLF-TRAGDFYV 126 Query: 103 DENRNLV------NMQGLQL--TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASM 154 D N L +QG Q+ G T ++Q ++ T S P + TT A + Sbjct: 127 DGNGYLCMSSTGYTLQGWQVDAKGTVIKDTVSSLQVMSSATKTSAP------EATTKAYV 180 Query: 155 QINLNSSDP-------LPTVTPF-------------SASNADSYNKKGSVTVFDSQGNAH 194 L+ +D + T+ F +N D + DS+GN+ Sbjct: 181 SGVLDKNDAQAADTGRIITIGFFDDLGYNYTAKFGIKKTNTDGTYDVTLKDIVDSKGNSI 240 Query: 195 ---DMSVYFVKTGDNNWQV---YTQDSSDPNSIAKTATTLEFNANGTLVDGAMAN----- 243 D F+ + N Q Y + DP +I + A+ + + GT + AN Sbjct: 241 FDVDKDGNFITSQGPNGQTMYSYKGRAVDPQTIFEDASLVFDQSEGTFTSISSANSPAAK 300 Query: 244 ---------NIATGAINGAEPATFSLSFLNSMQQNT-------GANNIVATTQNGYKPGD 287 N +ING+ + + F SM N G N + G G Sbjct: 301 TINLNLSVLNTQDASINGSNFSNIEVDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGA 360 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG-VALLGT 346 L ++DDG + G+Y N T LL QI +A FAN GL GDN + +T +SG +G Sbjct: 361 LTGITVSDDGKIYGSYDNGNTVLLCQIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGV 420 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + + G++++G LE SNVDLS + +MIV QR +Q+N++ I T D +L L+NL+ Sbjct: 421 EISADGGSISSGELEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLK 476 >UniRef50_A7HW68 Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW68_PARL1 Length = 454 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 131/457 (28%), Positives = 206/457 (45%), Gaps = 65/457 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----KVGLGVKVAGI 57 + + A++G+ A ++ L I +NIANS T GFK +F D+ S + V A Sbjct: 6 SMTTAITGIRAQSSALGHISDNIANSQTIGFKRTDTNFQDIVTASTSRNHLPGAVLAAPS 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRL------VDSNGSV----FYSRNGQFKLDENRN 107 + G+ + +AI+ +GFF + VD N +Y+R G F +D+ Sbjct: 66 FTNNVQGSIDASEVPTHMAINGSGFFVVSARVATVDGNPVFDNVNYYTRRGDFSMDKYGY 125 Query: 108 LVNMQGLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS---- 160 LVN G L G P TG P G P+ I I +AA+TT+T S + NL + Sbjct: 126 LVNGGGYTLQGLAIDPVTGNP----VGDTPSRIQINRDFLAARTTSTISYKANLPAWPKT 181 Query: 161 --SDP------LPTVTPF----------SASNADSYNKK----GSVTVFDSQGNAHDMSV 198 +DP L TV F SA+N D + G+VT +D G ++ Sbjct: 182 VNADPAIANSELLTVGRFTPALADLSVISAANEDIFLDNSLSGGAVTGYDELGAPANVQF 241 Query: 199 YFVKT-----GDNNWQVY--TQDSSD--PNSIAKTATTLEFNANGTLVDGAMANNIATGA 249 + K G + W ++ T DS+ + F+ G L + I Sbjct: 242 RWAKIDNEDGGGDTWNLFYKTSDSATGATDKWVNVGQDYAFDGQGRLTPAVDSTTITGLT 301 Query: 250 INGAEPATFSLSF-LNSMQQNTGANNIVATT---QNGYKPGDLVSYQINDDGTVVGNYSN 305 +NG +L +++ Q N V TT QNGY G+LVS ++++G + G YSN Sbjct: 302 VNGVSLGNVTLDHGASNVTQFEDDNGTVKTTELDQNGYPSGELVSIAVSENGRITGTYSN 361 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 +T L Q+ LA F ++ L ++ATQ SG +LG G + A EASNV Sbjct: 362 GKTVDLAQVSLATFNASDKLKKLDGTAFAATQESGEPMLGGG-----GDIIASAREASNV 416 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 D++ E +IV Q+ Y + + + T D+++ +N++ Sbjct: 417 DIADEFSKLIVTQQAYTAGTRIVTTADELIRETLNMK 453 >UniRef50_C5SMJ1 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMJ1_9CAUL Length = 472 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 133/463 (28%), Positives = 198/463 (42%), Gaps = 69/463 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGI---TQDF-- 61 V+GL A + L I NNIANS T +K F + S G G+ T+ Sbjct: 11 VAGLAANSNALSAISNNIANSTTTAYKRVRTDFQSIVTASSTPTGYNAGGVISTTRHMIS 70 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVD-----SNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 T GT LD+ I GFF + + ++R+G F DE+ L N L L Sbjct: 71 TLGTLQKASSQLDLGIDGQGFFITTQKSEPGAEDARLFTRDGSFFADEDGYLRNASNLYL 130 Query: 117 TGYPAT-GTPPTIQQG--ANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--------- 164 G+P T G PT+ + I++ N + TT A + NLN++ + Sbjct: 131 QGWPITAGGGPTLSAADLSQLRTINVENIAAQIEPTTFAEIVGNLNANQTISDRADEYAA 190 Query: 165 -PTVTPFSASNADSYNKKGS--------VTVFDSQGNAHDMSVYFVK----------TGD 205 PT P + +A + + S + V DSQG ++V +K Sbjct: 191 SPTTLPMATYDASAPDTTTSTRPDYEITIPVSDSQGGERRLTVSMIKLAADPTATPPIAA 250 Query: 206 NNW--QVYTQDSSDPN-SIAKTATT--------LEFNANGTLVDGAMANNIATGAIN--- 251 N W +V++ D D S A A+T L +N+ G L D + +TGA + Sbjct: 251 NTWAYEVWSPDVKDSTISPATEASTNGIVSRGHLVYNSAGKLTDIVDSTGTSTGATSLNL 310 Query: 252 --------GAEPATFSLSFLNSM----QQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 G T + F Q N+ + N V +G L QI+ +G V Sbjct: 311 SFNWNSAIGVAAQTVQVEFNGDQGGLTQLNSASTNRV--DADGTPFSGLDKVQISKEGLV 368 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 + N T+ + Q+ LA F N +GL N ++ + SG L G G L G Sbjct: 369 TAVFKNGSTRDIAQLALATFVNADGLTPVSGNAYTVSNDSGPLTLKVPGVSGAGLLGVGT 428 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LEAS+VDLS+E N+IV QR Y +N++TI T D++L L+N++ Sbjct: 429 LEASDVDLSEEFTNLIVTQRAYSANSRTITTADEMLQELLNIK 471 >UniRef50_Q30UL8 Flagellar hook FlgE n=2 Tax=Campylobacterales RepID=Q30UL8_SULDN Length = 718 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/238 (37%), Positives = 137/238 (57%), Gaps = 21/238 (8%) Query: 183 SVTVFDSQGNAHDMSVYFVK------TGDN-NWQVYTQDSSDPNSIA---KTATTLEFNA 232 S+ +FDS G+ H + F K TG + N ++ + + +S+A + + FN+ Sbjct: 483 SIDIFDSLGSKHTLRTEFRKVAVDASTGSSWNMKISVPEPATIDSVAPYNEKTGFVRFNS 542 Query: 233 NGTLVDGAMAN--NIATGAINGA---EPATFSLSFLNSMQQNTGANNIVATT---QNGYK 284 +G+L A N N++ A NG+ + L NS T ++ AT+ Q+G+ Sbjct: 543 DGSL---ATFNPPNVSFTANNGSAANQQVAIKLGTSNSFDGMTSFDSKSATSGISQDGFT 599 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 GDLV +I+ GT++G++SN ++ L QI +A F NNEGL++EG NV+ T +SG ++ Sbjct: 600 GGDLVGIRIDQSGTLIGSFSNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANSGDPII 659 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GTA T G + ALEASNVDLS L +I+ QR YQ+N +TI T DQ+L TL+ L+ Sbjct: 660 GTAATAGRGFMQAAALEASNVDLSLALTQLIIIQRGYQANGKTITTSDQLLQTLIGLK 717 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 87/310 (28%), Positives = 134/310 (43%), Gaps = 36/310 (11%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-----------------VG 49 VSGL + +DV NNIAN T G+K A+F+D+ A ++ VG Sbjct: 9 VSGLQSHQVAMDVESNNIANVNTVGYKYSRANFSDLLAQTRAIATAPQGELGGKNPVQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLDENRNL 108 LG V+ +T+ F+ G+ N+ + DVAI +GFF + G+ + Y+R G FK D N Sbjct: 69 LGATVSSMTRIFSQGSVQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDFKFDAGGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDPLPTV 167 V+ G + G+ + A TNI+IP L A T ++ NLNS + T Sbjct: 129 VDNNGFIVQGWLRDRATGFVDATAPITNINIPPGLTTPASPTQHVVIKANLNSGPLVKTY 188 Query: 168 TPFSASNADSYNKKGSV---TVFDSQGNAHD---MSVYF--------VKTGDNNWQVYTQ 213 +P A SY + D GN D M V F ++TG W +T Sbjct: 189 SP--AYEVKSYPTGTPLPNPEAIDENGNPIDSGNMGVLFNDSGEAFNLQTGQGIWASFTP 246 Query: 214 DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGAN 273 + + A +E + L DG + G + G A + +++++ T Sbjct: 247 -TKTAATAGVAAGAVELDITLELDDGTLKQITTNGGLAGNTAADNAARYVSAINAQTSVT 305 Query: 274 NIVATTQNGY 283 I+AT G+ Sbjct: 306 GIIATYSGGF 315 >UniRef50_B9CY95 Flagellar hook protein FlgE n=1 Tax=Campylobacter rectus RM3267 RepID=B9CY95_WOLRE Length = 784 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 135/238 (56%), Gaps = 20/238 (8%) Query: 183 SVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSIAKTATT-------LEF 230 S +FDS G H++ + FVK G W + Q ++PN I + F Sbjct: 549 STDLFDSLGTKHNIKIDFVKRGYTPNGGTEWTMVIQ-VAEPNRINPDGEPANVITGYVRF 607 Query: 231 NANGTLVDGAMANNIATGAINGA---EPATFSLSFLNSMQQNTGANNIVAT---TQNGYK 284 N +G+L + A+ I GA NG+ + L M +N +T +Q+GY Sbjct: 608 NPDGSLATYSPAS-ITFGAQNGSAGGQHIELKLGTTAQMDGLASTDNDSSTADISQDGYA 666 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 G+L +I+ GT+VG+++N ++ L Q+ +A F+NNEGL+SEG N++S T +SG ++ Sbjct: 667 SGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFSNNEGLSSEGGNLFSRTANSGDPVI 726 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G A T G +++ +LE SNVDLS+ L +IV QR +Q+N++TI T D++LNTL+ L+ Sbjct: 727 GAAQTAGRGKISSSSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQLK 784 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 19/173 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 V+GL A +DV GNNIAN T GFK A+F D+ + +VG Sbjct: 9 VTGLQAHQIAMDVEGNNIANVNTVGFKYSRANFDDLIYQTSRIATGPQNRHGGVNSMQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRL-VDSNGSVFYSRNGQFKLDENRNL 108 LGV+ T+ F G+ T + D+A+ +GFF + D + +Y+RNG F D N Sbjct: 69 LGVQTNSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSPDGGKTTYYTRNGDFSRDSVGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNS 160 V+ G + G+ I +I IP+ L + A+ TT +++ NL+S Sbjct: 129 VDNGGNIVQGWMRDEVTGEIDPTRPIGDIKIPSGLTVPARATTNIALKGNLDS 181 >UniRef50_B7RBK4 Flagellar hook protein n=3 Tax=Thermotogaceae RepID=B7RBK4_9THEM Length = 623 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 32/250 (12%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNN-----------WQVYTQDSSDPNSI-------AKT 224 +V V+DS GNA+ + FV+ G+ W+ YT DS +P S+ Sbjct: 375 AVQVYDSLGNAYTVYYEFVRLGNTTIGSESFKNAWIWRAYT-DSGEPISLIDEDGGSGYV 433 Query: 225 ATTLEFNANGTLVDGA---MANNIATGAIN---------GAEPATFSLSFLNSMQQNTGA 272 A ++F+ +G + + N+++G + G T + F + Q +G Sbjct: 434 AGLIDFDESGRPIQYRGLDSSYNLSSGEVRTIQFDAGQSGDGVVTITADF-SGATQFSGD 492 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 + + Q+G G L S+ IN+ G ++G +SN T +LGQI LA F N GL+ G+++ Sbjct: 493 STLNIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSL 552 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 + + +SGV +G G+G G L GALE SNVDL++E MIVAQR +Q+NA+ I T D Sbjct: 553 YVVSANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTAD 612 Query: 393 QILNTLVNLR 402 QILN LVN++ Sbjct: 613 QILNELVNIK 622 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 50/264 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 ++GL +DV+GNNI+N T GFK+ +F M A + ++G Sbjct: 9 ITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSPQENVGGTNPMQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG +V+ I + T G+ NTG D+AI +GFF +V S +Y+R G F LD N NL+ Sbjct: 69 LGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFF-IVSDGSSYYYTRAGAFTLDSNGNLI 127 Query: 110 NMQ-GLQLTGYPATGTPPTIQQGANPTNISIPNTL------MAAKTTTTASMQINLNSSD 162 G ++ G+ A P T ++ + TN I + + M AK T+ + NLNS Sbjct: 128 QTSTGYKVQGWTAVQDPETGERYID-TNKPIGDLVISAGMTMPAKKTSNVRFEGNLNSK- 185 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + P S +T+ D G HD+ V+F KT + +DP S + Sbjct: 186 ----LGPGSF----------VITLTDENGINHDVRVWFEKT-------QSDLGTDPFSSS 224 Query: 223 KTAT-TLEFNANGTL-VDGAMANN 244 + T ++ + +GT VDG M N Sbjct: 225 QRYTMKIDIDNDGTADVDGYMVFN 248 >UniRef50_B9R0M9 Conserved domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0M9_9RHOB Length = 477 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 134/484 (27%), Positives = 217/484 (44%), Gaps = 98/484 (20%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + AVSGL+A AT L+ I N+ANS T GFK +F+D+ +G +V+G T Sbjct: 6 AINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTFSDLVSGGGSTQADQVSGTTYAT 65 Query: 62 TDGTTTNTG----RGLD--VAISQNGFFRLVDS----NGSV------FYSRNGQFKLDEN 105 + T T G +D +AI+ G+F + + +GS FY+R G F++++ Sbjct: 66 SRATNTIGGDISSNDVDTYMAINGEGYFVVTQAADFVDGSTTFADDTFYTRAGDFEVNKE 125 Query: 106 RNLVNMQGLQLTGYP---ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD 162 VN G L G+P ATG P G NP+ I I + +AA +TTT + Q +L Sbjct: 126 GYFVNQSGYYLKGFPLDPATGNP----VGDNPSVIQINSQPLAASSTTTVNYQASLPR-- 179 Query: 163 PLPTVTPFSASNADSY---------------------------------NKKGSVTVFDS 189 +P T + + A+S GSVT ++S Sbjct: 180 -VPATTNYDPNTANSELLNDGANGAPGPNLGATEIGDTGTLEADFLASSISGGSVTAYNS 238 Query: 190 QGNAHDMSVYFVKT----GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNI 245 G+ ++V + K G W +Y + + + F+ G + A+AN Sbjct: 239 NGSEVPLNVRWAKVDNTAGAEVWSMYVDTGGEAGTSYYKVGDVTFDGTGQV--SALANTG 296 Query: 246 ATGAIN------------------------GAEPATFSLSFLN-SMQQNTGANNI---VA 277 AT A+ G + ++SF N S+ Q + I V Sbjct: 297 ATAALGVTTSGTTSFTLDEITVGGVTAGTAGNAADSITISFANGSLTQFADPDGIATSVN 356 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 +QNGY G+L + I++ G V+ +YSN QT+ L +I LA F + L ++AT Sbjct: 357 LSQNGYAAGELTNIAIDESGRVIASYSNNQTRALYEIPLATFQAEQSLRRVDGAAFAATS 416 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG A L G + + ALE SN D++ E +I+ Q+ Y +N++ + + D++L++ Sbjct: 417 DSGDADLSGG-----GAVISNALELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDS 471 Query: 398 LVNL 401 +N+ Sbjct: 472 ALNM 475 >UniRef50_C6RJ18 Flagellar hook protein FlgE n=1 Tax=Campylobacter showae RM3277 RepID=C6RJ18_9PROT Length = 756 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 46/304 (15%) Query: 131 GANPTNISIPNTLMAAKTTT-----TASMQINLNSSDPLPTVTPFSASNA----DSYN-- 179 GA NI++ A K T TASM P SA A DS N Sbjct: 467 GAKDMNIAVTGLTNATKNVTENVKFTASMA---------PISGSLSAGGATRVTDSLNMA 517 Query: 180 -KKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSI----AKTATT-- 227 S ++DS G H++ + F+K G W + Q ++PNSI + T Sbjct: 518 AHSSSTDLYDSLGTKHNVKMDFIKRGYTENGGTEWTMVIQ-VAEPNSINTVEPRNVVTGY 576 Query: 228 LEFNANGTLVDGAMANNIATGAING-AEPATFSLSF--------LNSMQQNTGANNIVAT 278 + FN +G+L + A+ I GA NG A L F L S N+ +I Sbjct: 577 VRFNPDGSLATYSPAS-ITFGAQNGSAIGQNIELKFGTTQTTDGLTSTDNNSSTADI--- 632 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +Q+GY G+L +I+ GT+VG+++N ++ L Q+ +A FANN+GLA EG N++S T + Sbjct: 633 SQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFANNQGLAGEGGNLFSRTAN 692 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG ++G A T G ++ +LE SNVDLS+ L +IV QR +Q+N++TI T D++LNTL Sbjct: 693 SGDPIIGAAQTAGRGKISASSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTL 752 Query: 399 VNLR 402 + L+ Sbjct: 753 LQLK 756 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 44/248 (17%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 V+GL A +DV GNNIAN T G+K A+F D+ + +VG Sbjct: 9 VTGLQAHQIAMDVEGNNIANVNTVGYKYNRANFDDLIYQTSRIATAPQNQHGGVNNMEVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRN 107 LG ++ T+ F G+ T + D+A+ +GFF +V S+G + +Y+RNG F D N Sbjct: 69 LGTQINSTTRIFKQGSLQTTDKQTDIALQGDGFF-MVSSDGGKTTYYTRNGDFSRDSEGN 127 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDPLPT 166 V+ G + G+ I +I IP L + A+ TT +++ NL+S + Sbjct: 128 FVDNGGNIVQGWMRDEETGEIDPTRPIGDIKIPVGLTVPARATTNIALKGNLDSGN---- 183 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT 226 D NKK + D N D+ DN+ + + D N++ A Sbjct: 184 ---------DVGNKKIPIYKLDQHHNGVDL--------DNDGTIAGSEVHDENNVG--AN 224 Query: 227 TLEFNANG 234 N NG Sbjct: 225 RFYVNKNG 232 >UniRef50_D2C6I0 Fagellar hook-basal body protein n=3 Tax=Thermotoga RepID=D2C6I0_THENR Length = 755 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 135/250 (54%), Gaps = 32/250 (12%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNN-----------WQVYTQDSSDPNSI-------AKT 224 +V V+DS GNA+ + FV+ G+ W+ YT DS +P S+ Sbjct: 507 AVQVYDSLGNAYTVYYEFVRLGNTTIGSESFKNAWIWRAYT-DSGEPISLIDEDGGSGYV 565 Query: 225 ATTLEFNANGTLVDGA---MANNIATGAI---------NGAEPATFSLSFLNSMQQNTGA 272 A ++F+ +G + + N+++G + +G T + F + Q +G Sbjct: 566 AGLIDFDESGRPIQYRGLDSSYNLSSGEVRTIQFDAGQSGDGVVTITADF-SGATQFSGD 624 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 + + Q+G G L S+ IN+ G ++G +SN T +LGQI LA F N GL+ G+++ Sbjct: 625 STLNIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSL 684 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 + + +SGV +G G+G G L GALE SNVDL++E MIVAQR +Q+NA+ I T D Sbjct: 685 YVVSANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTAD 744 Query: 393 QILNTLVNLR 402 QILN LVN++ Sbjct: 745 QILNELVNIK 754 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 50/264 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 ++GL +DV+GNNI+N T GFK+ +F M A + ++G Sbjct: 9 ITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVGGTNPMQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG +V+ I + T G+ NTG D+AI +GFF +V S +Y+R G F LD N NL+ Sbjct: 69 LGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFF-IVSDGSSYYYTRAGAFTLDSNGNLI 127 Query: 110 NMQ-GLQLTGYPATGTPPTIQQGANPTNISIPNTL------MAAKTTTTASMQINLNSSD 162 G ++ G+ A P T ++ + TN I + + M AK T+ + NLNS Sbjct: 128 QTSTGYKVQGWTAVQDPETGERYID-TNKPIGDLVISAGMTMPAKKTSNVRFEGNLNSK- 185 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + P S +T+ D G HD+ V+F KT + +DP S + Sbjct: 186 ----LGPGSF----------VITLTDENGINHDVRVWFEKT-------QSDLGTDPFSSS 224 Query: 223 KTAT-TLEFNANGTL-VDGAMANN 244 + T ++ + +GT VDG M N Sbjct: 225 QRYTMKIDIDNDGTADVDGYMVFN 248 >UniRef50_B8J3H7 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3H7_DESDA Length = 499 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 136/499 (27%), Positives = 213/499 (42%), Gaps = 114/499 (22%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------------------AGSKV 48 +G+ A ++V NN+AN +T G+K F+D+F A +V Sbjct: 10 TGMKGLAEGMNVTTNNLANVSTIGYKQQGILFSDIFYAEQGGMGNWWNAQDNSRVALGQV 69 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 G+G++V + F G ++ D+AIS GFF++ D ++Y+R G F+ D L Sbjct: 70 GMGLQVESVRTLFGQGALESSNTVTDMAISGKGFFQVTDGV-DLYYTRAGDFRPDREGVL 128 Query: 109 VNMQGLQLTGYP--ATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASMQINL-----NS 160 GL L GY A G+ +QQ I+I M +K+TT+ M+ NL NS Sbjct: 129 RTPSGLALNGYKYNADGSKGGLQQ------ITIDKFATMPSKSTTSVDMRFNLGLETPNS 182 Query: 161 SDPL-PTVTPFSASNAD--------SYNKKGSVTVFDSQGNAHDMSVYF----------- 200 +D P + + +A+ +Y S+T++ GN ++YF Sbjct: 183 TDAANPYFSLLNTYDANASPPLSNLAYGYAQSITLYGENGNQQQATIYFDAAPSDRPGSV 242 Query: 201 ----VKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE-- 254 + TG+ ++ P + A TL F+A G L D A G+ + A+ Sbjct: 243 VQYLISTGNT---PRDENGLAPGTGALMTGTLTFDAKGQLTDMTAFTPSAEGSKDLADWA 299 Query: 255 PATFSLSFLNSMQQNTGANNI-------------------VATTQNG------------- 282 P+ S L M N A + V +QN Sbjct: 300 PSALSDGGLPQMTVNGVATTVNLGISAAGGWQNAPANAAAVGASQNALGGMGQDATVAVD 359 Query: 283 ----YKPGDLVSYQINDDGTVVGNYSN---------------EQTQLLGQIVLANFANNE 323 YK V+ + N +G G SN Q+ L QI + F + + Sbjct: 360 ATTNYKGSSPVTRRNNQNGYPEGFLSNISISANGDVVGLFSNNQSMDLWQIPVCRFTSED 419 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL EG N++SAT +G +G AGT N+GT+ +E SNVD++ E+ NMI+ QR +QS Sbjct: 420 GLRREGHNMFSATADAGQMDMGEAGTENYGTIRAYNIENSNVDVATEMANMIITQRGFQS 479 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ + T DQ+L V L+ Sbjct: 480 NSKVVTTADQMLQKAVELK 498 >UniRef50_A8TLX3 Flagellar basal body FlaE domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLX3_9PROT Length = 433 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 122/440 (27%), Positives = 201/440 (45%), Gaps = 62/440 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGI--------- 57 VS L A + +I +NIAN T G+K TA F + S G+ Sbjct: 11 VSALAAQSQAFGIISDNIANVNTIGYKDTTARFQTLVTESSSSSRYSPGGVLARPFVNPE 70 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRL------VDSNGSVFYSRNGQFKLDENRNLVNM 111 Q GTT+NT D+++ +GFF + + S G +R G F DE NLVN Sbjct: 71 KQGLLQGTTSNT----DISLVGDGFFIVNENDDPLTSGGEYLLTRAGSFTEDEEGNLVNA 126 Query: 112 QGLQLTGYP--ATGT---PPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT 166 G L G+ +TGT T Q ++ +++ + ++TA++ +NL Sbjct: 127 AGFFLQGWRTDSTGTIVNSNTKDQLSSLETVNLAGFTSVSNPSSTANLAVNL-------- 178 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD---PNSIAK 223 P +A+ A + + ++T+FDS G H M++ + K N Y+ D ++ + A Sbjct: 179 --PANATTAST--QTTNLTIFDSLGVEHLMTINWTKNAQANEWAYSLDVTNQAGTTTAAI 234 Query: 224 TATTLEFNA----------NGTLVDGAMANN------IATGAINGAEPATFSLSF----- 262 A T++F+ GTLVDG A +A G+ GA ++ +++ Sbjct: 235 VAGTIDFDPADGTIEDIDNGGTLVDGDTAQTTLPITALAFGS--GAAASSIVINWGTVGQ 292 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 N M Q +G+ QNG P L + +I+++G V + N T+ + +I + Sbjct: 293 TNGMSQLSGSYEATLLNQNGSSPSALTAVEIDNEGVVTARFKNGDTRPIYKIAIGTVPAA 352 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 L SE N + + SG LL AG G + + ALE S VDLS E ++I+ QR Y Sbjct: 353 TELRSENGNAYKLSSRSGDLLLTEAGLQGAGAIESSALEQSTVDLSDEFTDLIITQRAYS 412 Query: 383 SNAQTIKTQDQILNTLVNLR 402 + + I T D++L+ ++ ++ Sbjct: 413 AATKLITTGDELLDEIIRVK 432 >UniRef50_A0RRQ1 Flagellar hook protein FlgE n=4 Tax=Proteobacteria RepID=A0RRQ1_CAMFF Length = 911 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 131/239 (54%), Gaps = 27/239 (11%) Query: 186 VFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSIAKT--------ATTLEFNA 232 ++DS G+ H++ + F K W + Q +P I A T+ F + Sbjct: 677 IYDSLGSKHEIKMEFRKISYSPENGTEWSMLIQ-VPEPGKINTETGEVANVIAGTVRFKS 735 Query: 233 NGTLVDGAMANNIATGAINGAEPAT-FSLSF--------LNSMQQNTGANNIVATTQNGY 283 +G+L+ G +N+ A NG+ P ++F L S + +NIV Q+GY Sbjct: 736 DGSLL-GYSPSNLTFTANNGSAPGQNIEINFGKIGDYNGLRSNDNTSTTDNIV---QDGY 791 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L ++++ GT++G ++N ++ L Q+ LA F NNEGL S+G NV+ T +SG + Sbjct: 792 TAGTLNELRVDESGTIIGAFTNGRSFGLAQVALAKFTNNEGLESDGGNVFVQTANSGAPV 851 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G+A T G + +LE SNVDLS+ L +IV QR YQ+N++TI T DQ+LNTL+ L+ Sbjct: 852 IGSAQTAGRGKINASSLEMSNVDLSRSLTQLIVVQRGYQANSKTITTGDQMLNTLLQLK 910 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 19/184 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A V+GL A +DV G+NIAN T GFK ASFAD+F+ + Sbjct: 4 ALWAGVTGLQAHQIAMDVEGDNIANVNTVGFKYSRASFADLFSQTAKVATAPQGDLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG ++ +T+ F G+ T + D+AI +GFF + G + Y+RNG F D Sbjct: 64 SMQIGLGTQINSVTKIFKQGSVQTTDKNTDLAIQGDGFFVVSPDGGKTYKYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ TI NI I P A+ TT ++ NLNS Sbjct: 124 SLGNFVDKNGYIVQGWLRNEDTGTIDPTGPVKNIQIEPGLSTPARATTEVALIGNLNSGS 183 Query: 163 PLPT 166 + T Sbjct: 184 SIGT 187 >UniRef50_Q1JZT1 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZT1_DESAC Length = 548 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/153 (41%), Positives = 101/153 (66%), Gaps = 2/153 (1%) Query: 250 INGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 IN AE T ++ + Q + +++++ TQ+GY G LVS +++DG ++GNYSN + + Sbjct: 397 INEAED-TQAVDIIFDATQYSSESDVISQTQDGYATGTLVSLTVDNDGNILGNYSNGEPR 455 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 L +I LA F+N GLA G+N++ AT SG A++GT G+G G + +LE SNVDL++ Sbjct: 456 KLARIALAKFSNPVGLAKAGNNLYEATDDSGTAIVGTVGSG-VGKIFTNSLEMSNVDLAQ 514 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E V MI QR +Q+N++ I T D++L L+NL+ Sbjct: 515 EFVKMITTQRGFQANSKIITTTDELLGELINLK 547 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/229 (35%), Positives = 115/229 (50%), Gaps = 26/229 (11%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVKVAGIT 58 VSGLNA L V+GNNIANS T GFKS F+D+ + S+VG G ++ + Sbjct: 11 VSGLNANGNALTVLGNNIANSNTIGFKSSRTIFSDLLSAEIAGSGGASQVGRGAGLSTVD 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 F+ GT T D+AI GFF + D S++Y+R G F DE LVN +G + Sbjct: 71 NIFSQGTFETTESNTDLAIEGPGFFMVSDPGEASIYYTRAGAFNFDETGTLVNPEGYAVQ 130 Query: 118 GYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPL-----PTVTPFS 171 GY T+ + T+++I + A TT S+ NLN++DP V+PF Sbjct: 131 GYYLNDAGETV---GDLTDLTIETRSFSPANPTTKISLATNLNANDPYLGTQGDAVSPFD 187 Query: 172 ASN-ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN-------WQVYT 212 ++ AD+ N SV +FDS G H ++ YF K N W+ +T Sbjct: 188 VNDPADTSNYASSVRIFDSLGREHLVTTYFNKLDPENNPDGVMQWESHT 236 >UniRef50_Q2BQT8 Flagellar hook protein (FlgE)-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQT8_9GAMM Length = 634 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 110/184 (59%), Gaps = 11/184 (5%) Query: 228 LEFNANGTLVDGAMANNIATGA------INGAEPA----TFSLSFLNSMQQNTGANNIVA 277 LEFN + L+ G +GA ++GA+PA T +L L Q A+ + + Sbjct: 452 LEFNPSSGLLRGINDVTFTSGATAPSITVSGADPANNATTITLD-LTGTTQFASASIVKS 510 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 +TQ+GY GDL+ ++ G +V ++SN Q Q LG + +A F N GL GD W+AT Sbjct: 511 STQDGYTKGDLIGVSFSETGEMVASFSNGQNQDLGVVAIATFENQSGLQPSGDTEWTATL 570 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 +SG A++ GTG GTL + ALE SNVDLS ELV +I AQRN+Q+N++TI+TQ+ + Sbjct: 571 TSGDAIVNPPGTGLNGTLRSAALEQSNVDLSAELVALIEAQRNFQANSKTIETQNTVTQA 630 Query: 398 LVNL 401 ++ + Sbjct: 631 ILQI 634 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 13/209 (6%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL--------GVKV 54 F+ AV+GL AA+T+LDVIGNNIANS+T GFK+ F D++A + VG GV V Sbjct: 4 FNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSGVTV 63 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 + I QDF GT T LD+AI+ +GFF+L D G ++R G F+LD++ +V+ G Sbjct: 64 SDIAQDFQAGTIEFTNNNLDLAINGSGFFQLDDGQGGTTFTRAGAFQLDKDGFIVSKSGK 123 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSAS 173 L GY + G N+++ K T + N++S DP P+ Sbjct: 124 FLQGYGLDDQGNRLPIG----NLAVSQKESPPKATEDIDLSFNIDSREDPTTLTFPYDKD 179 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 S+ +V FDS GN H + V+ Sbjct: 180 TPASFTYSTTVRTFDSLGNEHTIKYNMVE 208 >UniRef50_Q28JM2 Flagellar hook protein FlgE putative n=30 Tax=Bacteria RepID=Q28JM2_JANSC Length = 452 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 121/439 (27%), Positives = 198/439 (45%), Gaps = 56/439 (12%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGITQDFT 62 V+GL+ A+ L I +NIANS T G+K TA F+ M G+ GV+V T Sbjct: 24 VAGLSVNASRLATIADNIANSGTNGYKRATADFSSMVIDQGGGTYSAGGVRVT--TGRLI 81 Query: 63 D--GTTTNTGRGLDVAISQNGFFRLVDSNG---------SVFYSRNGQFKLDENRNLVNM 111 D G T G D+A+ GF + S+ ++ + G F+ D + LV Sbjct: 82 DQSGALATTNNGTDLAVRGRGFLPVTRSSAVNAAAGAELPLYLATTGSFRTDADGYLVTS 141 Query: 112 QGLQLTGYPAT--GTPPTIQQ----GANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 G+ L G+PA G P+ + G P +++ ++ TT S+ +NL +D Sbjct: 142 SGVTLMGWPADADGNVPSFPRDTSAGLEPVQVNV--NQFTSEPTTRISLGVNLPGTD--- 196 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----GD---NNWQVYTQDSSDP 218 + S + ++ SV FD+ G + + +F T GD N W + +DS+ Sbjct: 197 -----TTSESSGDTRQLSVEYFDNLGTSQSIEAFFTPTVPVVGDPASNTWTMTLRDSASN 251 Query: 219 NSIAKTATTL--EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN-SMQQNTGA--- 272 N++ T + + G + TG A T ++ L ++ N GA Sbjct: 252 NAVIGEYTVVFDDSRTGGGTIQSVSQPLPVTGGGWSATEGTLTVDVLGGPIEINIGAQGS 311 Query: 273 --------NNIVATT--QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 +N T+ ++G G+LVS +++ +G V N+ T+ + QI L + N Sbjct: 312 GSGLTQLSDNFAPTSISKDGSPVGNLVSVEVDPNGFVKANFDVGITRTVYQIPLIDLPNP 371 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 GL +E + +++ + SG L AG G G + ALE S D++ EL +I QR Y Sbjct: 372 NGLIAEDNQLYTTSAESGSFFLWDAGDGPTGDVVAFALEESTTDVAAELTQLIQTQRAYS 431 Query: 383 SNAQTIKTQDQILNTLVNL 401 SNA+ I+T D++L N+ Sbjct: 432 SNAKIIQTVDEMLQETTNI 450 >UniRef50_A7HN97 Putative uncharacterized protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN97_FERNB Length = 770 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 88/253 (34%), Positives = 129/253 (50%), Gaps = 35/253 (13%) Query: 183 SVTVFDSQGNAHDMSVYFVKTG------DNNWQVYTQDSSDPN----SIAKTAT------ 226 S V+DS GN + + + FVK +N W + +S N S TAT Sbjct: 519 STQVYDSLGNPYTLYIDFVKLASVYGNHENAWAFRIRSASGENIKYLSNYDTATEITGGT 578 Query: 227 --TLEFNANGTLVDGAMANNIATGAI---------------NGAEPATFSLSFLNSMQQN 269 L F+ G L+ G + + +TG I NG L LNSM Q Sbjct: 579 CGVLRFDKTGRLL-GVNSFDPSTGRISEGENVDAILFNAGENGDGIVKIKLD-LNSMTQF 636 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + Q+G G L S+ I+++G ++G+++N +LG++ LA F N GL G Sbjct: 637 AALADAFVKNQDGNAQGVLESFSISENGDIIGSFTNGLVDVLGKVALATFNNPAGLLELG 696 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 ++++ + +SG A +G G FG+L GALE SNVDLS+E +I+AQR +Q+NA+TI Sbjct: 697 NSLYGESANSGTARIGQPSKGGFGSLVAGALEMSNVDLSEEFTKLIIAQRGFQANARTIT 756 Query: 390 TQDQILNTLVNLR 402 T DQIL +VNLR Sbjct: 757 TADQILQEVVNLR 769 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 26/178 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------------SKVG 49 VSGL +DV+ NNI+N T GFK ++A F+ ++G Sbjct: 9 VSGLQGFQQEIDVVSNNISNVNTIGFKGARVTYATNFSQILDMSRRATDNTGGTNPKQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNL 108 G++VA I + G+ NTG+ D+AI GFF L SNG F++R G F LD N + Sbjct: 69 YGIRVASIDKIMNQGSFQNTGKKTDLAIQGEGFFIL--SNGQRQFFTRAGNFDLDLNGTI 126 Query: 109 VN-MQGLQLTGYPATGTPPTIQQGANP----TNISIPNTL-MAAKTTTTASMQINLNS 160 V GL+L G+ A P + ++ + +NI I + L MAAK TT +M NL++ Sbjct: 127 VQPTTGLKLQGWVAEVDPMSGRRYVDTNKPISNIQISSGLSMAAKQTTRMTMAGNLDA 184 >UniRef50_B1TBA9 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBA9_9BURK Length = 388 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 121/416 (29%), Positives = 185/416 (44%), Gaps = 59/416 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVKVAGITQ 59 +SGL A + L IG+N+AN T GFKS F D+ G + G GV A T Sbjct: 9 MSGLAAYSKGLQTIGDNVANLNTPGFKSSAPRFQDLCDGRPTAREGKRSGSGVAYAHATL 68 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL-DENRNLVNMQGLQLTG 118 +F G + LD+AI +G L D + ++ Y+R GQF + D+ GL+L Sbjct: 69 NFRQGELRGSTGQLDLAIDGDGLLALRDGD-TIRYARTGQFHIADDGFVTERTSGLKLAT 127 Query: 119 YPATGT--PPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 ATGT P ++ Q + P + T S P T FS S+ Sbjct: 128 LDATGTLAPISLAQ----RQLDPPCATRVVRFTDNLS-----------PGSTDFSVSD-- 170 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVK-TG--DNNWQVYTQDSSD-PNSIAKTATTLEFNA 232 V ++D+ G H + V F + TG W+V D P I TL+F+ Sbjct: 171 -------VEIYDANGAKHVLKVSFAQDTGVMPGRWKVTVADRDGTPLQIG----TLQFHG 219 Query: 233 N-----GTLVDGAMANNIATGAINGAEPAT-FSLSFLNSMQQNTGANNIVATTQNGYKPG 286 +D + ++ T ++ +E T FS ++++ + Q+GY G Sbjct: 220 GIPEPGQDRIDVTLPSSQLTVTLDFSEGVTAFSAGATSTLRM---------SKQDGYAAG 270 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 L S I+ DG + YSN Q G + LA FA+ + L G ++ A+ Sbjct: 271 MLASMNIDGDGQLALRYSNGQIGHAGAVALARFADPQRLVRLGAGLFDASHLP-PPRYAK 329 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G G L +GA+EASNVDLS E +I+ QR +Q+ +Q I T ++++ L +R Sbjct: 330 SGDPLVGQLRSGAVEASNVDLSGEFGQLILIQRGFQAASQVISTSNEMIMQLFQMR 385 >UniRef50_C3XKG1 Flagellar hook protein FlgE n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XKG1_9HELI Length = 758 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 21/237 (8%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNNWQ---VYTQDSSDPNSIAKTATTLE-----FNANG 234 +V ++DS GN H+ ++ F K GD+ W + + + S A+ LE F NG Sbjct: 525 TVDIYDSLGNKHEFTMQFEKVGDSEWSFRIIVPEPAELIGSSAQRPNILEGGSVTFGENG 584 Query: 235 TLVDGAMANNIATGAINGAE-PATFSLSF--------LNSMQQNTGANNIVATTQNGYKP 285 L+ G ++I GA P L F L S + + A N+ +GY Sbjct: 585 ELL-GVNPSSIQFKPNTGASFPQNIELDFGKGGGFDGLTSTSRESQAQNV---NGDGYAS 640 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 G L Y + GT++G++ N Q L Q+ +A FAN EGL G N+++ + +SG A +G Sbjct: 641 GVLKEYYFDATGTLIGSFDNGQNLALAQVAIATFANYEGLQESGSNLFAESANSGRATIG 700 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 TAGTG ++ LE SN DLS+ L +IV QR +Q+N+++I T DQ+LNTL+ L+ Sbjct: 701 TAGTGGRASVAASKLEMSNADLSRGLTQLIVVQRGFQANSKSITTADQVLNTLLGLK 757 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 82/277 (29%), Positives = 119/277 (42%), Gaps = 50/277 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-----------------VG 49 VSG+ A LDV NNIAN T GFK A F+ M + +K VG Sbjct: 9 VSGMQAHQIALDVESNNIANVNTTGFKYSRADFSTMVSQTKRSATIPYAGYGGVNDFSVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRN 107 LG + T+ F G+ NT R D+A+ G F +V +NG S Y+R+G F D N Sbjct: 69 LGTGIETTTKIFEQGSLQNTDRKGDLALEGKGMF-VVSNNGGYSNMYTRDGAFMFDAVGN 127 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPT----------NISI-PNTLMAAKTTTTASMQI 156 LVN G + G+ + G++ NI+I P + AK T I Sbjct: 128 LVNTSGFIVQGWVRDLSKLNCACGSDSLNRVDSTGPVGNITIDPRLTIPAKKTGVVVGNI 187 Query: 157 NL---NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAH----DMSVYF--------V 201 NL N ++ + +P +S+A++Y G ++D+ H DM V F + Sbjct: 188 NLTSGNKTENIGCPSPLDSSSANNYVAGGLDRLYDTSDKQHEIPQDMGVMFNDAGEAMRL 247 Query: 202 KTGDNNWQVYTQDSSDP----NSIAKTATTLEFNANG 234 + G W Y +++P +I A T N NG Sbjct: 248 QEGQGIWISYQTATAEPLELGGNIPAGAVTTTVNING 284 >UniRef50_C6XF46 Flagellar hook protein FlgE n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF46_LIBAP Length = 421 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 111/416 (26%), Positives = 186/416 (44%), Gaps = 24/416 (5%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGITQDF 61 A+SG++A + + + +NIAN T G+K +F+ + + S V G++++ Sbjct: 10 AMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGLEISTKDMIS 69 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPA 121 G+ +T D+AI GFF + + +R G F ++ L N+ G L GYP Sbjct: 70 EQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVLLGYPL 129 Query: 122 T--GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL--NSSDPLPTVTPFSASNADS 177 P + I++ + ++A TTT + NL N++ P TP Sbjct: 130 KNASAPLIVNSFQGLERINVKHAELSAMPTTTGFISNNLDKNATIITPDKTPKHNGRDAE 189 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV--YTQDSSDPNSIAKTATTLE-FNANG 234 Y K S +D+ G++ VY+ KTGD W+V + QD S NS L + Sbjct: 190 YTHKSSFAAYDTLGSSVVYDVYYTKTGDKKWEVSIFRQDQSTNNSFPYNVAPLNTVEVSF 249 Query: 235 TLVDGAMAN--------NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 V G +AN N T I+ + T +S Q G + NG+ PG Sbjct: 250 DPVTGYLANSSHKAISFNDNTSGID--QQITIDIS---KTTQLAGGFIPQKSEINGHAPG 304 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 + ++ DG V Y + + ++ +A + + L N + T+ SG +G Sbjct: 305 KPKDFSVSKDGYVDIIYDDGTRVPIYRLAIATVPSEDNLKLFDGNTYLPTRDSGDISIGF 364 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G + +GALE +NVD++ EL +I AQRNY N++ +T ++ L++L+ Sbjct: 365 PGHNQHGEIFSGALETANVDIASELTELIEAQRNYAVNSKVFQTGSDFMDILISLK 420 >UniRef50_Q2CGG5 Flagellar hook protein FlgE, putative n=3 Tax=Rhodobacteraceae RepID=Q2CGG5_9RHOB Length = 432 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 125/439 (28%), Positives = 184/439 (41%), Gaps = 51/439 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A A ++ I NIAN+ T GF+ SF+ M + I +D Sbjct: 6 AMKTGVSGLQANAASVANISENIANANTDGFRR---SFSQMVTTTTTNPSSMSGVIARDR 62 Query: 62 TD----GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYS-----RNGQFKLDENRNLVNMQ 112 D G+ T D+A+ GFF + S R G F DEN NL N Sbjct: 63 IDMGTPGSMRPTDSATDLALEGGGFFVVSQRPDEPLASNYMLTRAGSFTPDENGNLKNAA 122 Query: 113 GLQLTGYPA-----TGTPPTIQQGANPTNISIPNTLMAAKTTTTA-SMQINLNSSDPLPT 166 G L G+P TG G T + ++ A TTT A S + S Sbjct: 123 GFYLAGFPTDQNGQTGGIDRTSFGDLSTVNVLERSIQGAPTTTIALSGNLPAQESGLATP 182 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT 226 PF +S F+ G A + + ++ + + N DPN Sbjct: 183 GAPFISS----------AEYFNPLGGAERLELRWLPSMNKNEWTLEISGPDPNQPPYGWV 232 Query: 227 TLEFNANGT----------LVDGAMAN---NIATGAI-----NGAEPATFSLSF-----L 263 T F +G + +G AN N ATG NG P +L Sbjct: 233 TATFEDSGPNAGSPLTYQGMPNGGGANFAFNDATGQATLTIDNGNTPQVITLDLGAPGEF 292 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 + M Q G ++G + G+L +I +DGTV G + N Q L + +AN +N E Sbjct: 293 DGMTQFAGDYTPPQIDRDGSEAGNLARVEIENDGTVFGFFDNGQRMSLFSLPVANVSNPE 352 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL + N + +++SG LG AG G ++ GALE SNVD+++EL ++I QR Y + Sbjct: 353 GLVAGNGNAYKLSRASGAMTLGIAGGGGTASIYAGALEGSNVDIAEELTDLIATQRAYST 412 Query: 384 NAQTIKTQDQILNTLVNLR 402 NA+ + T D++L+ ++ Sbjct: 413 NAKVVTTADEMLDETTRIK 431 >UniRef50_C5RFU7 Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFU7_CLOCL Length = 474 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 130/474 (27%), Positives = 211/474 (44%), Gaps = 87/474 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 ++GL A T LDVIGNNIAN T FKS + F D S VG Sbjct: 9 ITGLKANQTKLDVIGNNIANVGTTAFKSSSIRFTDSLYQNMTSASAPGYNLGGTNPSVVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFF----------------------RLVD 87 LGVKV+ +T + T G NTG LD AI +GFF +++ Sbjct: 69 LGVKVSAVTTNMTQGNLQNTGSNLDCAIDGDGFFMVATGPLPTGNEFGVTLDTLSHSIIN 128 Query: 88 SNG-SVFYSRNGQFKLDENRNLVNMQG-------LQLTG-------YPATGTPPTIQQGA 132 NG V Y+R+G F LD + NL++ G LQ TG Y A G + + Sbjct: 129 GNGMGVNYTRDGSFSLDADGNLLSNSGYRILGYPLQETGLGISSVDYAANGNCNFVDANS 188 Query: 133 NPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADSYNKKGSVTVFDSQ 190 + +TL+ K ++ N+ D P + + + + K +T+ Sbjct: 189 PYGITAATDTLVPMKIPNKVAIAATRNTLDATGAPVGLAMTYTGSSTTTDKPDITI---- 244 Query: 191 GNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF--NANGTLVDGAMANNIATG 248 NA + +V D +++ D ++ TT + + NG+ D + T Sbjct: 245 NNADNT---YVGDTDVTIKIFFNDKYQDTTVTPPMTTPRYVISINGS--DAVAVADADTI 299 Query: 249 AINGAEPATFSLSFLNSMQQNTGAN-----NIVATTQNGYK-------PGDLVSYQINDD 296 I A+ +T +LS L+ + N + +I A +N ++ + ++ I + Sbjct: 300 NIKMADGSTKTLSQLDIVLNNAPTDPATPADIQAAAKNSWQFTVNADGEKAIKNFNIEKN 359 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL-GTAGTGN---- 351 G + G + + +LGQ+ ++ F N GL G+N+++ + +SG ++ + GT Sbjct: 360 GVIKGVLQDGRVTVLGQLAMSTFKNTVGLQKLGNNLYNVSANSGEPIIRSSVGTEKDRSN 419 Query: 352 ---FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+ NG +E SNVDL+++ MIVA R +Q+N++ I T D+IL LV L+ Sbjct: 420 EDAFGSCVNGVVEMSNVDLAEQFTEMIVASRAFQANSKIITTSDEILQELVQLK 473 >UniRef50_Q5HS69 Flagellar hook protein n=15 Tax=Campylobacter RepID=Q5HS69_CAMJR Length = 845 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 21/239 (8%) Query: 184 VTVFDSQGNAHDMSVYFVKT-----GDNNWQVYTQ--DSSDPNSIAKTAT-----TLEFN 231 + ++DS G+ H + V FVK G N WQ+ + + ++ N+ + T T FN Sbjct: 607 LEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPTNIIVGTARFN 666 Query: 232 ANGTLVDGAMANNIATGAINGAEP-ATFSLSFLNS-----MQQNTGANNIVATTQNGYKP 285 +G+L + I NGA P LSF S + + A+ + +GY Sbjct: 667 NDGSLAN-YTPKTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTS 725 Query: 286 GDLV--SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G+L + +++D G ++G ++N +T + +I +A+ ANN GL G N++ T +SG + Sbjct: 726 GNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIV 785 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G AGTG G + ALE SNVDLS+ L +I+ QR YQ+N++TI T DQ+L TL+ L+ Sbjct: 786 VGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLK 844 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 86/173 (49%), Gaps = 19/173 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL A +DV GNNI+N T GFK A F MF+ + ++G Sbjct: 9 VSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGGSNPLQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLDENRNL 108 LGV V+ T+ + G+ T + DVAI+ +GFF + D G Y +R+G FKLD N Sbjct: 69 LGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDFKLDAYGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNS 160 VN G + G+ TI +P NI I P + A +T +++ NLNS Sbjct: 129 VNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLNS 181 >UniRef50_A5FUQ6 Flagellar basal body FlaE domain protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUQ6_ACICJ Length = 425 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 133/446 (29%), Positives = 206/446 (46%), Gaps = 74/446 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV---GLGVKVAGIT 58 A +VSGL A ++ I +NIANS T G+K F + S G VA Sbjct: 6 ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQSTASNNGPDSVVA--N 63 Query: 59 QDFT---DGTTTNTGRGLDVAISQNGFFRL--------------VDSNGSVFYSRNGQFK 101 ++T +GT T + L +AI+ NG+F + + +Y+R G F Sbjct: 64 PEYTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFT 123 Query: 102 LDENRNLVNMQGLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL 158 L+ + LVN G L G+ P TGT T++ A +Q++ Sbjct: 124 LNSSGYLVNGAGAYLDGWSVNPTTGT---------------------VNTSSLAPIQVSQ 162 Query: 159 NSSDPLPT--VTPFSAS---NADSYNKKGSVTVFDSQGNAHDMSVYF--VKTGDNNWQVY 211 +S P+PT VT SA+ S V V+DS GN +++ + V N W Sbjct: 163 GASPPVPTSNVT-LSATLPTTPSSTPVTTQVDVYDSLGNMQPLNLSWSPVTGSANTW--- 218 Query: 212 TQDSSDPNSIAKT--ATTLEFNANGTL---VDGAMANNIATGAI------NG-AEPATFS 259 T + S PN+ T + T+ FN NGTL G + A G + NG A+P T Sbjct: 219 TLNVSSPNATPSTVGSATMAFNTNGTLSSITAGTGTTSPAAGQLQISPSYNGSAQPITLD 278 Query: 260 LSFLNS---MQQNTGAN-NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 S + Q G + N+ +QNG G + I+ G + NY+N ++ + QI Sbjct: 279 FGAPGSTAGLTQYAGTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANYTNGFSKQIAQIP 338 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 LA+FA+ + L ++ + +ATQ+SG A + G G+ G L G++E SNVD++ + ++I Sbjct: 339 LASFASPDALQNKSGQIETATQASGAATINAVG-GSGGALVTGSVENSNVDIATQFTDLI 397 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNL 401 AQ+ Y +N + + QIL T VN+ Sbjct: 398 NAQQAYTANTKVVTAAQQILTTTVNM 423 >UniRef50_D1B5D3 Flagellar hook protein FlgE n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B5D3_SULD5 Length = 851 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 132/250 (52%), Gaps = 44/250 (17%) Query: 183 SVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSI-----AKTATT--LEF 230 S ++DS G+ H + + KTG W V T +P I K T + F Sbjct: 616 STDIYDSLGSKHTIRFQYTKTGFTETGGTEWSV-TVTVPEPGDINLGEEPKNVVTGSIRF 674 Query: 231 NANGTLV------------DGAMANNI------ATGAINGAEPATFSLSFLNSMQQNTGA 272 N++G+L +G+ AN I + G ++G + S +++ Sbjct: 675 NSDGSLATYTPRNLTYTANNGSTANQIVQLNFGSVGQLDG----------ITSFDKDSST 724 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 NI Q+GY GDL +++ GT++G+++N ++ L Q+ ++ F NN GL S+G N Sbjct: 725 TNI---NQDGYTGGDLSGLSVDETGTIIGSFTNGRSFALAQVAMSTFTNNGGLESDGGNC 781 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 + T +SG + G AGTG G++ + +LE SNVDLS+ L +IV QR YQ+N++TI T D Sbjct: 782 YIQTSNSGDPVFGQAGTGGKGSVQSSSLEMSNVDLSRSLTQLIVIQRGYQANSKTITTAD 841 Query: 393 QILNTLVNLR 402 ++LNTL+ L+ Sbjct: 842 EMLNTLLQLK 851 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 19/178 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A V+GL A +DV NNIAN T G+K A+F+++ + + Sbjct: 4 ALWAGVTGLQAHQIAMDVESNNIANVNTTGYKYSRANFSNLLSQTVSIATAPQGELGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG ++ +T+ F G+ T + D+AIS +GFF + G+ + Y+RNG F D Sbjct: 64 SMQIGLGTTISTVTKIFEQGSIETTDKDTDLAISGDGFFVVSPDGGTTYKYTRNGDFSFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNS 160 N N V+ G + G+ I + +NI I P A T+ S++ NL+S Sbjct: 124 ANGNFVDSNGYIIQGWLRDQETGQIDTTSPISNILITPGYTTPANATSIVSIKANLDS 181 >UniRef50_B7IDJ5 Flagellar hook protein FlgE n=2 Tax=Thermosipho RepID=B7IDJ5_THEAB Length = 704 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 39/272 (14%) Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----------TGDNNWQVYTQDSSD 217 T F+ S +S SV V+D+ GNA+ + + FVK T N W +++S Sbjct: 434 TNFAVSEFNSPFYTTSVQVYDTLGNAYTLYIDFVKLSANYYDGTDTFKNAWAFRVRNASG 493 Query: 218 PNS------------IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF--- 262 N + TA + F+ +G G A + +TG +N E ++ F Sbjct: 494 ENIKYLSNYETGQEITSGTAGVMTFDESGRFT-GIYAFDPSTGKVNRGESID-AIKFDAG 551 Query: 263 ------------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 L + Q ++ T QNG G L S+ I ++G ++G +SN T Sbjct: 552 ENGDGEVKIKLNLTGITQFAATSDAYVTEQNGNAQGTLESFSIAENGDIIGTFSNGLTDK 611 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 LG++ LA F N GL G+++++ + +SG A++ G G G+L +GALE SNVDLS+E Sbjct: 612 LGKVALAIFNNPAGLLEAGNSLYTESANSGGAIIRQPGFGGSGSLISGALEMSNVDLSEE 671 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +I+AQR +Q+NA+ + T DQIL +VNLR Sbjct: 672 FTKLIIAQRGFQANARVVTTADQILQEVVNLR 703 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 148/309 (47%), Gaps = 56/309 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 V+GL +DV+GNNIAN +T GFK+ ++A F+ ++G Sbjct: 9 VTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTGGTNPKQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 GVKVA I + + G+ NTG+ D+AI +GFF L D +G ++Y+R G F LD N LV Sbjct: 69 YGVKVASIDKIMSQGSFQNTGKKTDLAIQGDGFFILKDGSGKIYYTRAGNFDLDVNGTLV 128 Query: 110 NM-QGLQLTGYPATGTPPTIQQGANP----TNISIPNTL-MAAKTTTTASMQINLNSS-D 162 GL+L G+ A P + ++ + ++I I L MAAK T+ ++ NL++ Sbjct: 129 QASSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTSYMTVANNLDARVG 188 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNA-----HDMSVYFVKTGDNNWQVY--TQDS 215 P TV S +S + K +FD + A D +Y K VY + DS Sbjct: 189 PSKTVMTLSGYGGNSVDVK---ILFDRESGALQEPFSDYQIYRAK-------VYSGSDDS 238 Query: 216 SDPNSIAKTATTLEFNANGTLVD-GAMANNI-ATGAINGAEPATFSLSFLNSMQQNTGAN 273 D ++F+ G +V GA+ ++ AT +G SL+ LN++QQ+ G Sbjct: 239 VDGE------IYIKFDKFGNVVQSGAIKQSLSATATTDG------SLT-LNNIQQDDGNY 285 Query: 274 NIVATTQNG 282 + NG Sbjct: 286 TFIIKDSNG 294 >UniRef50_B4RG77 Flagellar hook protein FlgE n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG77_PHEZH Length = 452 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 65/454 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGI---TQDFTD 63 VSGL A ++ L I +NIAN T +K +FA++ V G+ T+ F Sbjct: 5 VSGLVANSSALAAISDNIANVNTVAYKRNQVNFANVVTAQAVKGKYSAGGVQSVTRQFVS 64 Query: 64 --GTTTNTGRGLDVAISQNGFFRLVDSNGSVF------YSRNGQFKLDENRNLVNMQGLQ 115 G + D+AIS +GFF + + + ++R+G F +D + +VN GL Sbjct: 65 QQGLIQASNSTTDLAISGDGFFVVANKGLGLTGADPRSFTRSGAFAVDSDGYMVNDAGLY 124 Query: 116 LTGYP--ATGTPPTIQQGANPTNISIPNTL------MAAKTTTTASMQINLNSSDPLP-- 165 L G+P A GT NP+++S+ ++ A TT + N+N P+ Sbjct: 125 LQGWPVQADGT-----FNVNPSDLSLMQSINVKNLGSAVAPTTELGVTANVNKDGPVSAS 179 Query: 166 ------TVTPFS-ASNADSYNKKG-------SVTVFDSQGNAHDMSVYFVKTG-DNNW-- 208 +V S A ADS G + V DS G + +++ +K N W Sbjct: 180 EATYDGSVAATSMAEYADSAGATGVKPDFVIEMNVVDSAGGSRKIALAMLKDDVANAWHA 239 Query: 209 QVYTQDSSD--------PNSIAKTATTLEFNANGTLVDG---AMANNIATGAINGAEP-- 255 ++Y +S P +A+ T+ FNA+GT+ G A +++ A GA P Sbjct: 240 EIYAVPASSVDLAAGTPPGQLARG--TINFNADGTINLGTTTAALQSLSLDASAGATPRW 297 Query: 256 ------ATFSLSF-LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 A ++ L+ + Q + + + A NG G++++ ++ +G V Y N Q Sbjct: 298 ATGLGLAAQDINLALDKLSQYSSTSTVTAIQSNGAGVGNVIAIDVDPEGVVSAVYDNSQI 357 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 + + +I +A F N + LA+ N + T +G + AG G G ++ +LEAS VDLS Sbjct: 358 RKIAKIGVATFPNPDALAAVSGNAYRPTIPAGEMTVKEAGIGGAGKISPSSLEASTVDLS 417 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E +I Q+ Y ++++ I T DQ+L L+N++ Sbjct: 418 AEFTGLIATQKAYSASSKIITTADQMLEELINIK 451 >UniRef50_D0XTV6 Flagellar basal body FlaE domain protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTV6_9CAUL Length = 425 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 123/428 (28%), Positives = 194/428 (45%), Gaps = 42/428 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A S AVSGL A + L I NIANS+T +K+ F + +G K G + +T Sbjct: 6 ALSTAVSGLTAQSRALSAISENIANSSTTAYKTTDVYFQALVSGGK-GSSTSTSAVTAKS 64 Query: 62 TD-----GTTTNTGRGLDVAISQNGFFRLV-DSNGSV---FYSRNGQFKLDENRNLVNMQ 112 + GT T+T +VAI GFF + D G+ Y+RNG F+ + + L+N + Sbjct: 65 SQAMSVQGTVTSTSVATNVAIQDAGFFVVTSDPAGAASEDMYTRNGSFETNADGYLINTE 124 Query: 113 GLQLTGYPATGTPPTIQQGANP-TNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G L G+P + N T +S N L + T A+ +I ++++ P Sbjct: 125 GFYLMGWPTDAEGNVLASNTNDLTGLSAIN-LSSIGGTAKATTEIEMSANVP-------- 175 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD---SSDPNSIAKT---- 224 A A S+ + DS G +H + + KT DN W++ D +SD + + T Sbjct: 176 ADAAVGAALTTSMQMIDSLGVSHTVGQTWTKTADNTWELTLSDPVLTSDGTTQSGTINGG 235 Query: 225 ATTLEFNANGTL--VDGAMANNIATGAINGAEPATFSLSF-----------LNSMQQNTG 271 T+ FN +G+L V A+ + TG +GA + SL S G Sbjct: 236 PYTVVFNTDGSLGSVTPALDFTV-TGFSSGAADSAVSLDIGEVGGTDGVTQYASTSSTIG 294 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 + V T Q+G G+L I+ DG V N+ N + + QI +A F+N GL Sbjct: 295 LED-VQTEQDGALYGELSGISIDSDGLVTANFDNGISLAIYQIPIATFSNPNGLTLVSGT 353 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + ++G L G G G+L ALE S D++ E MI+AQ+ Y + +Q + + Sbjct: 354 TYDENSAAGQVHLNLPGEGGAGSLVASALEGSTTDIATEFNKMIIAQQAYSAASQVVSSA 413 Query: 392 DQILNTLV 399 + ++L+ Sbjct: 414 SDMFDSLI 421 >UniRef50_Q1PUJ3 Similar to flagellar hook protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUJ3_9BACT Length = 532 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 122/220 (55%), Gaps = 5/220 (2%) Query: 188 DSQGNAHDMSVYFVKTGDNNWQVY-TQDSSDPNSIAKTATTLEFNANGTL-VDGAMANNI 245 DSQG H++++ F+K D W + + S+D T + + FN +G+L G Sbjct: 312 DSQGTGHNVTLSFIKKNDGEWDMRASMPSADGTITTDTISAITFNDDGSLKSSGDTTLTF 371 Query: 246 ATGAINGAEPATFSLSFL---NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 I ++ F L + + Q+ +++ A+ Q+G + G S+ ++ DGT+ Sbjct: 372 KFDGITTSQTVKFKLGTFGKTDGIYQSGKGSSVTASEQDGSESGSFSSFSVDTDGTMYAL 431 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 YSN + + Q+ LA F N +GL GDN++ T SSG L T GTG+ G + NG LEA Sbjct: 432 YSNGTSSKIAQLQLATFGNVQGLRRSGDNLYEQTDSSGEPLYTTGGTGSAGDIYNGYLEA 491 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVD++ EL ++I+AQR +Q N++ I T D++L VNL+ Sbjct: 492 SNVDMTSELTSLIMAQRGFQLNSRVISTADEVLAEAVNLK 531 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 17/144 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK---------VGLGV 52 A V+G+ + + LDVIGNN++N TYG+KS F+D+ + K +G+GV Sbjct: 6 ALYAGVTGIRSHQSWLDVIGNNLSNINTYGYKSSRLLFSDLISQDKGSGGVNPMQIGMGV 65 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 KV I+ F+ GT T D AI +GFF L N + F+SR G F D + LV+ Sbjct: 66 KVGSISSLFSQGTLEATNNEFDFAIQGDGFFVLNGGNKN-FFSRVGTFATDASNQLVD-- 122 Query: 113 GLQLTGY---PATGTPPTIQQGAN 133 TGY ++G TI G++ Sbjct: 123 --STTGYQILDSSGKTITIPYGSS 144 >UniRef50_C5ZVV6 Flagellar hook protein n=2 Tax=Helicobacter RepID=C5ZVV6_9HELI Length = 751 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 25/239 (10%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDN--NWQVYTQDSSD--------PNSIAKTATTLEFNA 232 ++ ++DS GN HD ++ F K N NW++ + ++ PN + + T F Sbjct: 518 TLDIYDSLGNKHDFTIQFTKVAGNQWNWRIIVPEPAELIGGTAQRPNILEGGSVT--FGE 575 Query: 233 NGTLVDGAMANNIATGAINGAE-PATFSLSF--------LNSMQQNTGANNIVATTQNGY 283 G ++ G + I NGA P + L F L S + ANNI +GY Sbjct: 576 QGEIL-GFNPSTIQFKPNNGAAFPQSIDLDFGTSGGYDGLTSTAAESQANNIDG---DGY 631 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L + + GT++G + N QT L Q+ +A+FAN EGL G N+++ + +SG Sbjct: 632 TAGMLQDFYFDATGTMIGKFDNGQTLALAQVAVASFANYEGLQESGSNLFAESPNSGGPT 691 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +GTAG+G ++ LE SN DLS+ L +IV QR +Q+++++I T DQILNTL+ L+ Sbjct: 692 IGTAGSGGRASIQASKLEMSNSDLSRGLTQLIVVQRGFQASSKSITTSDQILNTLLGLK 750 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 110/260 (42%), Gaps = 46/260 (17%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-----------------VG 49 VSG+ A LDV NNIAN T GFK A F+ M + +K VG Sbjct: 9 VSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRAATIPYAGYGGVNDYSVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRN 107 LG + T+ F+ G+ NT R D+A+ NG F +V +NG Y+R+G F D N Sbjct: 69 LGTGIETTTKIFSQGSLQNTDRKADLALEGNGMF-VVSNNGGFTNMYTRDGAFSFDAVGN 127 Query: 108 LVNMQGLQLTGY----------PATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQI 156 LV G + G+ +G + NI+I P + AK T T + I Sbjct: 128 LVTTSGYIVQGWVRDLSKLNCDCGSGNINRVDSTGPIGNITIDPRLTIPAKATETVTGNI 187 Query: 157 NLNSSDPLPTVT---PFSASNADSYNKKGSVTVFDSQGN----AHDMSVYF--------V 201 NL S T P +++A++Y G ++D+ A DM V F + Sbjct: 188 NLTSGTKTENTTCPSPLDSTSANNYIAGGLDRLYDTADRQLEVAQDMGVMFNDAGEAMQL 247 Query: 202 KTGDNNWQVYTQDSSDPNSI 221 + G W Y ++ P I Sbjct: 248 QEGQGIWVSYQTATTTPLHI 267 >UniRef50_D1U366 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U366_9DELT Length = 515 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 86/124 (69%) Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +Q+GY PG L++ I+++G + G Y+N QTQ L I LANF N +GL+S+G N++SAT Sbjct: 391 SQDGYAPGVLINVAIDENGVLSGEYTNGQTQELYTIALANFTNTQGLSSQGSNLYSATTE 450 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG A +GT G+ FGT+ + +LE SNVD + EL +I+ Q YQ+NA+ I T D +L+ Sbjct: 451 SGQAFIGTPGSAGFGTIASNSLEQSNVDTATELTKLIILQAAYQANAKVITTADTLLSAA 510 Query: 399 VNLR 402 ++++ Sbjct: 511 ISMK 514 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 47/249 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGIT 58 +SGL A + V+ NN+ANS T +KS + +F D+F + +VG GV VA + Sbjct: 11 ISGLKAQSQATSVVSNNLANSTTTAYKSSSITFEDVFYSTVYAGGSVGQVGNGVTVASVN 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQGLQLT 117 D++ G+ +T DVAI+ NGF+ ++D + G+ +Y+R G F + L + G ++ Sbjct: 71 TDYSQGSYESTNSATDVAINGNGFYVVIDPDTGNTYYTRAGNFTFNTEGYLEDAHGNKVQ 130 Query: 118 GY-------PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT-- 168 G+ T T I Q +P N T+ +NL+S++ T + Sbjct: 131 GWAMNDGSIEGTLTDIVIDQSQSPPN-----------ATSEVGFSLNLDSTETDHTTSAT 179 Query: 169 -PFSA------SNAD------SYNKKGSVTVFDSQGNAHDMSVYF--VKTGDNN--WQ-V 210 P++A AD +Y +++VFD G+AHD++VYF V+T D W+ V Sbjct: 180 NPYAALFEAYDGTADPALGDSAYAYSTTISVFDENGSAHDVTVYFDPVETDDGTIVWEYV 239 Query: 211 YTQDSSDPN 219 T + S+ N Sbjct: 240 VTCNGSEDN 248 >UniRef50_B7ATR6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATR6_9BACE Length = 420 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 37/421 (8%) Query: 17 LDVIGNNIANSATYGFK-------------SGTASFADMFAGS------KVGLGVKVAGI 57 +DVIGNNIAN T FK + AS + G ++GLG V I Sbjct: 1 MDVIGNNIANVNTIAFKSSSVSFSEVFYQTTQVASGPNATTGKGGQNAKQIGLGTSVGSI 60 Query: 58 -TQDFTDGTTTNTGRGLDVAISQNG-FFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQ 115 T+ T+G + T DV +S +G F +V SNG+ +++R G F D + LV G Sbjct: 61 STKVDTEGASQRTDNPFDVKLSGSGNSFFIVRSNGNTYFTRAGDFTYDASGALVTQSGAN 120 Query: 116 LTGYPATGTPPTIQQGANPTNI-SIPNTLMAAKTTTTASMQINLNSSDP-LPTVTPFSAS 173 + G+ ++ P + S T + TT + N+NSS + S + Sbjct: 121 VMGWVTNDQGEIVKDVVQPLYVKSDEFTYTMPEQTTNLKVSGNINSSSGNFAKGSGTSGA 180 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLE---- 229 + D + +++ +D+ G + ++ + N+ + A T + Sbjct: 181 DGDQKGETMTLSFYDNLGYRYQATIAVTQVDKYNYHTEVTGVTKEGKAADLTVTFDHDIS 240 Query: 230 FNANGTLVDGAMANNIATGAINGAEPATF-------SLSFLNSMQQNTGANNIVATTQNG 282 FN L+DG +++ GA+ +F +S L S+ T I + G Sbjct: 241 FNPTTGLLDGT-DSSLDFTITGGADADSFVKDTIAVDISNLKSIGDETKFEYIDVAGK-G 298 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG-V 341 G + S I DDG ++ +YSN T ++GQI +F N GL G N+++AT +SG Sbjct: 299 KAVGKMSSVGIQDDGRIIASYSNGDTVVIGQIATQSFTNAAGLEKVGTNMYAATLNSGEF 358 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G T G++ +G +E SNVDL+ E +MI QR +Q+N++ I D +L L+NL Sbjct: 359 DGVGEDITSAGGSMVSGTIEMSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELINL 418 Query: 402 R 402 + Sbjct: 419 K 419 >UniRef50_B8CYR1 Flagellar hook protein FlgE, epsilon proteobacterial n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYR1_HALOH Length = 519 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 10/223 (4%) Query: 182 GSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT-TLEFNANGTLVDGA 240 G++T FD G ++ N W D +D N A A+ T+ FN +GT+ G+ Sbjct: 304 GAMTDFDGAG-----AITLSNPPSNTWDWNLVDVTDANLPASPASGTITFNPDGTINSGS 358 Query: 241 MANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + IA NGA T +L F Q G + +GY+ G L + I+D G + Sbjct: 359 NGS-IAFDPTNGAATGQTINLDFSALTQLAEGFD--FKINSDGYETGALEGFTIDDGGVI 415 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 G+YSN + +GQI +A F N GL EG+ ++S +++SG +G AG+G G ++ G Sbjct: 416 TGSYSNGLVRPIGQIAIAYFVNPSGLMKEGETLFSPSENSGDPQIGEAGSGGRGKISVGN 475 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDL+++ +MI QR +Q+N++ I T DQ+L LVNL+ Sbjct: 476 LEMSNVDLAEQFTDMITTQRGFQANSKIITTTDQMLQDLVNLK 518 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 35/216 (16%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSK-------------VG 49 VSGL A T +DVIGNNIAN T G+KS + +F +M + G+K VG Sbjct: 9 VSGLKAHQTRMDVIGNNIANVNTVGYKSSSVTFKEMLSQTLRGAKAPQGGRGGVNPMQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV V IT D T G TG D+AI NG+F +V++ ++R G+ LD+N LV Sbjct: 69 LGVGVGSITVDHTQGNLQPTGVTTDLAIQGNGYF-VVNNGQKNLFTRAGRLNLDDNGYLV 127 Query: 110 NMQ-GLQLTGYPATGTPPTIQQGANPTNISIPN--TLMAAKTTTTASMQINLNSSDPLPT 166 N+ G + G+ A + TI G +P NI I + ++M A+ T A++ NL+S Sbjct: 128 NVSNGFVIQGWMADISTGTINSGQDPENIHITDEYSIMNARATGNATISGNLDSQ----- 182 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 F + ++ +V V DS G H +++ F K Sbjct: 183 ---FGGT------REITVDVLDSLGEMHTVTLSFTK 209 >UniRef50_B6IQC5 Flagellar hook protein FlgE n=1 Tax=Rhodospirillum centenum SW RepID=B6IQC5_RHOCS Length = 434 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 136/440 (30%), Positives = 191/440 (43%), Gaps = 53/440 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGSKVGLGVKVAG 56 A VSGL A + I +NI+NS+T G+K F+ + GS GV+ Sbjct: 6 AMYSGVSGLAAQSAKFAAISDNISNSSTVGYKRSGVQFSTLVTSASSPGSYSAGGVQADL 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFF----RLVDSNG---SVFYSRNGQFKLDENRNLV 109 T+ G T D+AIS GFF R NG S +R+G F++DEN NL Sbjct: 66 HTEVSRGGIVQATNSATDMAISGRGFFVVSNRSAAVNGEAPSYMLTRSGAFRVDENGNLH 125 Query: 110 NMQGLQLTGYP------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD- 162 N G L G+ G P+ +++ + AK TT NL +S Sbjct: 126 NTAGYFLQGWKLGPDGKVVGGEPSRTSFTGLETVNLSSITGLAKATTQIDFAANLPASQT 185 Query: 163 -PLPTVTPFSASNADSYNKKGSVTVF------DSQGNAHDMSVYFVKTGDNNWQVY---- 211 P PFS S D Y G S N ++++Y T + Sbjct: 186 GKTPPAQPFSTS-VDYYTPLGGTGRLTLEWAPQSAANEWNLTIYDGTTSLGTANIVFNGN 244 Query: 212 TQDSSDPNSIAKTATTLEFNANGTL-VDGAMANNIATGAI----NGAEPATFSLSFLNSM 266 T S P S+ T E A+ TL VD A TG+I NG +P +L N Sbjct: 245 TATSGPPGSLN---TMSEVGASPTLDVDAA------TGSIKLDVNG-QPIVVNLGRPNQT 294 Query: 267 QQNT-GANNIVATTQN----GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 T ++ V T N Y P L +I DDG + Y N Q + QI +A+ N Sbjct: 295 GGLTQWGDDYVPTKINKDGASYAP--LERVEIGDDGVMTAIYKNGLRQAVYQIPVADVTN 352 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 +GL N + ++ SG L AG+G G + ALEASNVD+++EL ++I QR Y Sbjct: 353 PDGLRRMDGNAFQVSRESGDYYLWDAGSGKAGAVDGAALEASNVDIAEELTSIIETQRAY 412 Query: 382 QSNAQTIKTQDQILNTLVNL 401 SNA+ I+T D++L+ + L Sbjct: 413 SSNAKIIQTADEMLDEVSRL 432 >UniRef50_A9BEX9 Putative uncharacterized protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEX9_PETMO Length = 702 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 90/279 (32%), Positives = 143/279 (51%), Gaps = 46/279 (16%) Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT- 226 T FS +N S + S V+DS GN ++ + F K N W + + D + K+ Sbjct: 425 TNFSEANYISPSVTTSTVVYDSLGNPYNTYLKFTKIDANTW-YWKAELEDGTPLYKSTAD 483 Query: 227 ----------TLEFNANGTLV--------DGAMANNIATG----------------AIN- 251 + F++NG + DG + I G A+N Sbjct: 484 GQLLDDSAEGVIAFDSNGNIAATQWKINPDGTIDQTIGDGDDGAAGFWFDPAELGAALNP 543 Query: 252 --------GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 GA P S++F + Q N+I T Q+G G L S+ IN +G ++G++ Sbjct: 544 SVDPQSAAGAGPVNVSINF-QELSQFFAENSIAVTEQDGNAQGTLESFAINTNGQIIGSF 602 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 +N T LGQ+ LA F N EGL++ G+++++ + +SG+ +G +G G G++ GALE S Sbjct: 603 TNGLTAPLGQVALATFNNPEGLSATGNSMYAMSSNSGLPQIGVSGVGGRGSINPGALEMS 662 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NVDL++E NMI+AQR +Q+N+++I T D ILN LVN++ Sbjct: 663 NVDLAEEFTNMIIAQRGFQANSRSITTADAILNELVNIK 701 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 33/181 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFAD-----MFAGS------------KVG 49 ++GL LD++ NNIAN T G+K A+F + AG+ ++G Sbjct: 9 ITGLRNFQDQLDIVANNIANVNTVGYKGSRATFQTTLFQTLSAGNAPQNQLGGTNPMQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG ++A I + T G+ +TG+ D+ I GFF L D G +Y+R G F D N V Sbjct: 69 LGSQLASIDKLMTQGSPMSTGKATDLMIQGEGFFILSDGIGQ-YYTRAGNFTRDYNGFFV 127 Query: 110 N-MQGLQLTGYPATGTPPTIQQGANPT--------NISIPN-TLMAAKTTTTASMQINLN 159 + G++L G+ A I Q N T +I I + +MAAK T+ + NLN Sbjct: 128 DPASGMKLQGWTA-----KIDQEGNRTIDTNDPIGDIQISSGQVMAAKQTSFVRLAHNLN 182 Query: 160 S 160 + Sbjct: 183 A 183 >UniRef50_C1TKJ0 Flagellar hook protein FlgE n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKJ0_9BACT Length = 875 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 16/236 (6%) Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDN--NWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 +G T++DS GN H + V + K G N +W+ + D + ++ + F++ G L+ Sbjct: 642 HEGKGTIYDSLGNEHTLEVVWKKVGSNAWSWEAFLPDEPELK-LSDNKGVIRFSSEGKLL 700 Query: 238 DGAMANNIATG--AINGAEPATFSLSF---------LNSMQQNTGANNIVATTQNGYKPG 286 G N I+ G AI GA+ A L F + + Q A TQNGY G Sbjct: 701 SGG-ENTISIGFSAI-GADDADVVLDFSGKSFDKEEIEGVTQYGSAFTTKPYTQNGYSMG 758 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 L + +++DGT+VG Y N Q + L ++ LA FAN +GL G+ +S + +SG + Sbjct: 759 ILEDFSVSNDGTIVGIYDNGQNRGLYKMALAMFANPQGLVKTGNTCFSKSINSGDPSIVN 818 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A GT+ +LE SNVD+++E ++I QR +Q++A+ I T D +L L+NL+ Sbjct: 819 AMVEGAGTIAGSSLEYSNVDITEEFTDLITTQRGFQASARVITTSDSVLEELLNLK 874 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 94/189 (49%), Gaps = 31/189 (16%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 VSG A LDV+GNNIAN T GFK T F D+ + +VG Sbjct: 9 VSGAKAHQKRLDVVGNNIANVNTVGFKKSTVVFQDLLSQTERGAMAPDGNVGGVNAKQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV+VAGI T GT + TG D+AI G++ +V + Y+R GQF LD N +L Sbjct: 69 LGVQVAGIETIHTQGTVSQTGNRTDMAIQGEGYY-VVRNGAENLYTRAGQFVLDSNSDLA 127 Query: 110 NMQGLQLTGYPATGTPPTIQQ------GANPTNISIP-NTLMAAKTTTTASMQINLNSS- 161 M G TGY G T+ + G+ ++I+IP M AK T+T + NL+S Sbjct: 128 -MSG---TGYRVQGNEMTVDEDGVISTGSELSDINIPIGRKMEAKATSTVGYRCNLDSRV 183 Query: 162 DP-LPTVTP 169 DP LP P Sbjct: 184 DPYLPLGIP 192 >UniRef50_A7H673 Flagellar hook protein n=8 Tax=Campylobacter jejuni RepID=A7H673_CAMJD Length = 875 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 23/240 (9%) Query: 184 VTVFDSQGNAHDMSVYFVKT-----GDNNWQVYTQDSSDPNSIAKTAT--------TLEF 230 + ++DS G+ H + V FVK G N WQ+ + +P I T T F Sbjct: 637 LEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIR-VPEPAEINATGEGPNNIIVGTARF 695 Query: 231 NANGTLVDGAMANNIATGAINGAEP-ATFSLSFLNS-----MQQNTGANNIVATTQNGYK 284 N +G+L + I NGA P LSF S + + A+ + +GY Sbjct: 696 NNDGSLSN-YNPRTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYP 754 Query: 285 PGDLVS--YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G+L +++D G ++G ++N +T + ++ +A+ ANN GL G N++ T +SG Sbjct: 755 SGNLKPEGIRVDDKGNILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSGNI 814 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++G AGTG G + ALE SNVDLS+ L +I+ QR YQ+N++TI T DQ+L TL+ L+ Sbjct: 815 VVGEAGTGGRGEMKTAALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLK 874 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 96/196 (48%), Gaps = 21/196 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL A +DV GNNI+N T GFK A F MF+ + ++G Sbjct: 9 VSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRGGQNPLQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLDENRNL 108 LGV V+ T+ + G+ T + DVAI+ +GFF + D G Y +R+G FKLD N Sbjct: 69 LGVSVSSTTRIHSQGSVQITDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFKLDAYGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSDPLPTV 167 VN G + G+ +I P NI I P + A +T +++ NLNS + T Sbjct: 129 VNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAQSTEVAIKANLNSGLNIGTA 188 Query: 168 -TP-FSASNADSYNKK 181 TP +S + +N+K Sbjct: 189 STPLYSLDSVHGFNQK 204 >UniRef50_B7GGB1 Flagellar hook protein FlgE n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GGB1_ANOFW Length = 460 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 134/482 (27%), Positives = 193/482 (40%), Gaps = 117/482 (24%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVG 49 + G+ LDVIGNNI+N TYG+K +F D+ + G ++G Sbjct: 9 IGGIRNFQYKLDVIGNNISNVNTYGYKKARVTFKDLVSQQISAATSSTGTRGGINGKQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFF--------RLVDSNG----------- 90 LG + I T G+T T R LD+A+ +GFF L+ +G Sbjct: 69 LGSGLGSIETIHTQGSTQTTSRPLDLALGGDGFFVVGSINDVTLISMDGPAGKLGTNKVN 128 Query: 91 ------SVF---YSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPN 141 VF ++R G F LDE +VN G L G A T+ A P+ Sbjct: 129 TGVPIDRVFNLSFTRAGNFYLDEYGYIVNSDGQYLIGEAAIKDVDTVITNA-------PH 181 Query: 142 TLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV 201 A + ++ LNS T+ F D + K D+ V F+ Sbjct: 182 VAQARR-----DLETFLNS-----TLVNFIKKWKDEFTKDP-----DNNPTTQTDFVNFI 226 Query: 202 KTGDNNWQVYTQD---SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE-PAT 257 + +N + + +DPN FN + A N + N A+ P T Sbjct: 227 RNFNNELKNLNEKITGKTDPNDTTLATAGTYFNDR--VSPKASINPVPLLPENEADWPDT 284 Query: 258 FSLS-------------FLNSMQQNTGANNIVATTQNGYKPGDLVSYQ------------ 292 + + F+ S+QQ V + K G++ S++ Sbjct: 285 LAEAEKMMGPYLEGISGFVESVQQ-------VLQDYSEPKYGNVTSFEPGLIQIPKTAKS 337 Query: 293 --INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG---------- 340 I DG V SN Q ++ GQI+LA F N GL G N + T +SG Sbjct: 338 FGITADGKVTFIDSNGQLKIAGQILLAQFPNPTGLEKMGGNTFKETNNSGKLDRNANGLT 397 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 + L G G + +GALE SNVDLS+E MIVAQR +Q+N + I T D+IL LVN Sbjct: 398 INELSRPGLNGAGEIISGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVN 457 Query: 401 LR 402 L+ Sbjct: 458 LK 459 >UniRef50_B8DS27 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS27_DESVM Length = 525 Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 83/123 (67%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 QNGY G L SY +++ G + YSN QTQ L + LA+F N++GL EG N++SAT S Sbjct: 402 QNGYATGYLTSYYVDEGGVIYATYSNGQTQALFIVALASFNNDQGLQLEGGNLYSATTES 461 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G A +G AG G +G++ LE SNVD+S E+V++IV QR YQ+N++ I T D++L T + Sbjct: 462 GTANIGRAGQGIYGSIYGEKLEESNVDVSTEMVDLIVMQRAYQANSKVITTVDEMLQTAL 521 Query: 400 NLR 402 L+ Sbjct: 522 GLK 524 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 53/282 (18%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGI 57 +VSGL + A ++ VIGNN+ANS+T G+KS + F D+F S ++G G ++ I Sbjct: 10 SVSGLLSTAESISVIGNNLANSSTTGYKSMSMLFEDVFYSSITTSGGIDQIGNGSAISAI 69 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNMQGLQ 115 + DF+ G+ +T +++AI+ G+F + D ++G ++Y+R G F + LVN G Q Sbjct: 70 STDFSQGSYQDTSEAMNMAIAGEGYFIVEDPQNDGQIYYTRAGDFTFNTEGYLVNSSGYQ 129 Query: 116 LTGYPATGTPPTIQQGANPT------NISIPNTLMAAKTTTTASMQINLNS--------- 160 + G+ P +P+ ++ + + A TT ++ +NL+S Sbjct: 130 VQGWAV---DPDTASSTDPSTTGALGDVQLKSRTSPASATTNVTLTVNLDSGGDDNSTST 186 Query: 161 SDP-LPTVTPFSASNAD-----SYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQ 209 +DP +T + S D Y + ++TV+D G+AH+++VYF + TG W+ Sbjct: 187 TDPYFSLLTEWDGSADDPLGTTKYEYQTTITVYDEAGSAHELTVYFDQVEDSATGSTTWE 246 Query: 210 --VYTQDSSDPNSIAK------------TATTLEFNANGTLV 237 V S D +I A TL F+A G LV Sbjct: 247 YLVTMNPSEDVRTIGGQSVSGTSAAGLLMAGTLSFDATGALV 288 >UniRef50_A4U4J9 Flagellar hook protein FlgE n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4J9_9PROT Length = 430 Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 119/440 (27%), Positives = 204/440 (46%), Gaps = 61/440 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + AV+ L A +T L +I +N++NS+T G+K+ T SF + S G+T Sbjct: 6 AMNSAVTALKAQSTALSIISDNLSNSSTTGYKANTTSFKTLVTQSYSSTSYASGGVTASV 65 Query: 62 -----TDGTTTNTGRGLDVAISQNGFFRLVDSNGSV----FYSRNGQFKLDENRNLVNMQ 112 G + T D+A+ +GFF V S G+ F++R+G+F++D + + + Sbjct: 66 RQNVAAQGVISGTSNSTDLALDGDGFF--VVSYGATGEETFFTRDGEFEID-SAGFMCLG 122 Query: 113 GLQLTGYPATGTPPTIQQGANPTN----ISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 L G+ + I N ++ +++ A+ T+ ++Q NL Sbjct: 123 NYYLQGWETDSSGNVIAGSTNSSSTLSAVNVNRFTGTAEATSAETIQANL---------- 172 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD---SSD-------- 217 P A+ D ++ VFD+ G +H +++ + KT N W++ D SSD Sbjct: 173 PADAATGDVVTA--TMEVFDALGVSHTVTMSYEKTAANEWELSLSDPVLSSDTATDSGDI 230 Query: 218 ---PNSI-------------AKTATTLEFNANGTLVDGAMANNIATGAINGAE--PATFS 259 P ++ AT LEF+ G A++IAT AI+ + T S Sbjct: 231 TGGPFTLTFADGALTSITDAGGVATELEFSITGF---STGASDIATIAIDVGQGTSGTGS 287 Query: 260 LSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 L+ +S + + I + T +G + G L S +++ G + ++ N Q + ++ +A+F Sbjct: 288 LTQFSSNSDDPDIS-ITSITGDGVEYGALSSVEVDKKGVIWAHFDNGQDIAIYKLAVADF 346 Query: 320 ANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQR 379 N GL ++G V+ T +SG L AG T+T ALE+S VD S E MIVAQ+ Sbjct: 347 TNANGLENQGYGVYQQTSASGDFTLHEAGEDGVATITPSALESSTVDTSDEFTRMIVAQQ 406 Query: 380 NYQSNAQTIKTQDQILNTLV 399 Y + +Q I T + + L+ Sbjct: 407 AYSAASQVISTASDMFDDLM 426 >UniRef50_B5Y7E4 Flagellar hook protein FlgE n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7E4_COPPD Length = 519 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 142/289 (49%), Gaps = 32/289 (11%) Query: 126 PTIQQGANPT-NISIPNTLMAAKTTTT-ASMQINLNSSDPLPTVTPFSASNADSYNKKGS 183 P ++ N +I IP +L T TT Q NLN++ P F+ SN Sbjct: 250 PVVEPDTNKVGDIVIPRSLTIPPTPTTNVQFQGNLNANAPEGANVTFTVSN--------- 300 Query: 184 VTVFDSQGNAHDMSVYFVKTGD-NNWQV-YTQDSSDPNSIAKTATTLEFNANGTLVD--- 238 V DS G H M + VK+ N W V + +S+ P T F+++G + D Sbjct: 301 --VIDSLGVTHSMLINAVKSASPNTWDVTVSMESASPVQYVVT-----FDSDGRISDVKK 353 Query: 239 ----GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 I NGA+ +L+F S A++ V +G G L+S+ + Sbjct: 354 DGQSYGTTPTIDFDPGNGAQTRQITLNF--SAITQYAADSRVVGLVDGNVNGKLLSWFVT 411 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 D+G V+G + N Q + L QI LANF N GL+ EG+N+W T +SG G G+ G+ Sbjct: 412 DEGKVMGEFDNGQIRELAQIALANFQNPAGLSREGNNLWQNTANSG--FRGYVEAGDLGS 469 Query: 355 L-TNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L GALE+SNVDL++E N+I+ QR +Q++ + I T D++ ++ L+ Sbjct: 470 LIIRGALESSNVDLAEEFTNLIITQRGFQASTRVITTSDEVTQDIIGLK 518 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 19/136 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----------------- 44 +F +SGL +DVI NNIAN T +K+ A+F+D+ A Sbjct: 4 SFFNGISGLKVHQIRIDVISNNIANVNTTAYKAARATFSDVVALTLKGARAPYGGRGGTN 63 Query: 45 GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 S+VGLGV +A I T G T NT R D+AI +GFF + D + +++R+G F +D Sbjct: 64 PSQVGLGVGLATIDNIMTQGPTNNTNRASDLAIQGDGFFVVSDGQRN-WFTRDGAFDIDL 122 Query: 105 NRNLVNMQ-GLQLTGY 119 L+ + GL++ G+ Sbjct: 123 TGRLIQLSTGLKVQGW 138 >UniRef50_B5J6Y8 Conserved domain protein n=3 Tax=cellular organisms RepID=B5J6Y8_9RHOB Length = 1412 Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 85/123 (69%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 QNG+ G L I+ +G + NY+N Q + LG+IVLANF N GL G+ + T SS Sbjct: 1289 QNGFTSGRLDGLNIDSNGLLRANYTNGQNKPLGKIVLANFNNQNGLKQVGNATFVETASS 1348 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G ++G AGT FG++ +GALE SNVD+++ELVN+I AQRN+Q++++ I+T Q+ T++ Sbjct: 1349 GEPIIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQRNFQASSKAIETSTQLTQTII 1408 Query: 400 NLR 402 N+R Sbjct: 1409 NIR 1411 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 110/220 (50%), Gaps = 17/220 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F A++GLN A ++ NNIAN T GFK A F D+FA S +G G Sbjct: 1 MSFYTALTGLNGAQADIAASSNNIANVGTTGFKLSRAEFGDIFATSPLQNSTSSIGSGAI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNM 111 + G+ Q FT G + + LD+AIS GFF L S S V Y+RNG F +D NRN+V+ Sbjct: 61 LKGVKQQFTQGNISASLNALDMAISGQGFFALKPSLTSTQVVYTRNGSFNVDNNRNVVDS 120 Query: 112 QGLQLTGYPA-TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP- 169 G L YP T + + + +P T + TT + +N+ ++ + T Sbjct: 121 SGQFLLTYPVNEDGSVTAKDIDSAVPLRLPVTSGDPQGTTKVDLAVNVPANADVVTENQK 180 Query: 170 ------FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT 203 F ++++S+ S T+FD GN +VYF+KT Sbjct: 181 FVDGYVFDPNDSESFTNSTSFTIFDDLGNPTIATVYFIKT 220 >UniRef50_C0QPA5 Flagellar basal body and hook protein FlgE n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA5_PERMH Length = 540 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 127/259 (49%), Gaps = 32/259 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------KVG 49 +F +GLNA L VI +NIAN T GFK+ +F D+ + S ++G Sbjct: 4 SFYTGNAGLNANKNWLSVISDNIANVNTIGFKAERVNFEDLISSSLTTFANNSPKNMEIG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G V T+DF+ G NT D+A+ GFF + D+ +Y+R GQF+ D N +L+ Sbjct: 64 GGSFVGSTTKDFSQGALMNTNTPTDLALDGEGFFMVRDAQDVTYYTRAGQFRTDANGDLI 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTN----ISIPNTLMAAKTTTTASMQ-INLNSSDPL 164 N+ G++L G+ + N I+IPN + TT A + NL++ L Sbjct: 124 NLNGMKLLGW-------QLDDAGNIAGAIGAINIPNDMPPHVTTKLALKEPTNLDAGSEL 176 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP------ 218 T F S+A +Y+ ++TV+DS G H+ +YFV TG N W+V+ +P Sbjct: 177 VTGV-FDTSDARTYSYVNAITVYDSLGVPHEAQLYFVHTGPNQWRVFGLMDDEPIQFNVP 235 Query: 219 -NSIAKTATTLEFNANGTL 236 ++ A +EFN G + Sbjct: 236 GDANTYDALVVEFNGVGQI 254 Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 252 GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 G P F+L N Q + I Q+GY GDL+S +++DG V G YSN Q + Sbjct: 393 GGNPIQFTLDIQNMKQ--VESEFIFYAEQDGYAKGDLLSVSVSEDGLVRGVYSNGQVKDW 450 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 +I +A F + E L +G+N++ + ++ G + G LE SNVD+S+E Sbjct: 451 ARIAIATFNDKEILIRKGNNLFLPNSQTYTPIIVPGGV--ISKIRGGFLELSNVDISREF 508 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +N+I AQR YQ+NA+TI T DQ+L +N++ Sbjct: 509 INLITAQRAYQANARTITTSDQVLQETMNIK 539 >UniRef50_Q31FL0 Flagellar hook protein FlgE n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FL0_THICR Length = 538 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/118 (53%), Positives = 81/118 (68%), Gaps = 4/118 (3%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--SKVGLGVKVAGITQDFTD 63 AVSGLNAA+ L VI NN+AN+ T G+KS A F+DMF G S G GV+V ITQDFT+ Sbjct: 9 AVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFSDMFYGAQSTPGNGVRVDSITQDFTN 68 Query: 64 GTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRNLVNMQGLQLTGY 119 GT T+TGR LD+AI +GFF L D G Y+RNG FKLD++ + + +G ++ GY Sbjct: 69 GTITDTGRDLDMAIDGDGFFILEDRTGKYENVYTRNGSFKLDKDGYVTSQEGNKVQGY 126 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 78/139 (56%) Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 M Q G+ N+ TQNGY GDLV DG + YSN ++ + Q+ +ANF + Sbjct: 400 FTKMTQFAGSYNLRGVTQNGYAIGDLVGVYTGKDGVIEARYSNGRSVPVAQLGMANFNDK 459 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 L G ++ + +SG +GT+ +G++ GALE SNVD + ELV+MI QR YQ Sbjct: 460 NALEKLGGQSYAESFASGAVQIGTSERNGYGSINAGALEYSNVDTAGELVHMIQTQRTYQ 519 Query: 383 SNAQTIKTQDQILNTLVNL 401 ++AQ I+T + T++ L Sbjct: 520 ASAQVIQTSQTLTQTILQL 538 >UniRef50_C6BZU9 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZU9_DESAD Length = 513 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 87/123 (70%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G LVS +++++G ++GNY+N Q+ L Q+ LA+F N GL +EG ++ AT S Sbjct: 390 QDGYPTGSLVSVEVDENGILIGNYTNSQSIELFQLGLASFTNESGLKAEGGTLFRATTDS 449 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G A++GTAG+ FG++ + ALE SNVDL+ ++ +I+ Q +YQ+N++ + T D +L T + Sbjct: 450 GEAIIGTAGSSGFGSVVSNALEGSNVDLASQMTELIIIQSSYQANSKVVTTADTLLQTAI 509 Query: 400 NLR 402 +L+ Sbjct: 510 SLK 512 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 41/224 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGIT 58 +SGL + V+ NN+ANS+T GFKS A F D+F + +VG G V+ I Sbjct: 11 ISGLYVNSFATSVVSNNLANSSTVGFKSSDAIFEDVFYSTLTTGGGLAQVGNGAGVSTIN 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQGLQLT 117 D++ GT N+ +VAI+ +G++ +VD + S +Y+R G F D++ LV+ G Q+ Sbjct: 71 TDYSQGTYQNSSISTNVAINGDGYYMVVDPDTSTTYYTRAGNFDFDKDGFLVDAYGNQVQ 130 Query: 118 GYP-----ATGTPPTIQ--QGANPTNISIPNTLMAAKTTTTASMQINLNSS--DPLPTVT 168 G+ A+G+ TIQ Q +P K T+ ++ +NL+S D T Sbjct: 131 GWEMENGSASGSLTTIQLDQSQSP-----------PKATSEIALTMNLDSQSVDEAITAN 179 Query: 169 PFSA------------SNADSYNKKGSVTVFDSQGNAHDMSVYF 200 P+++ + Y+ ++TV+D G+AHDM+ Y Sbjct: 180 PYTSLFELYDGTQNPPLDDSQYSYSTTMTVYDENGSAHDMTYYM 223 >UniRef50_A4WW59 Putative uncharacterized protein n=4 Tax=Rhodobacter sphaeroides RepID=A4WW59_RHOS5 Length = 474 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 130/467 (27%), Positives = 204/467 (43%), Gaps = 75/467 (16%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGSKVGLGVKVAGITQD 60 V+GL A AT L I +NIANS TYG+K A F M +G+ GV+ + Sbjct: 11 VAGLYANATKLASIADNIANSGTYGYKRADADFESMVITQSANSGTYSAGGVRANTLRLV 70 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDS--------NGSVFYSRNGQFKLDENRNLVNMQ 112 G +T +D+AIS G +V N ++ +R G FK D N L Sbjct: 71 EERGAIVSTSNAMDIAISGRGMLPVVRETSLGSTTGNDALLMTRTGSFKTDPNGVLKTDT 130 Query: 113 GLQLTGYPA--TGTPPTI----------------QQGANPTN-----ISIP---NTLMAA 146 GL L G+PA GT PT+ Q A+PT +++P L A+ Sbjct: 131 GLVLLGWPANADGTVPTMSRDSISQLQPVVIAANQTAADPTTRMNLGVNLPAERTKLGAS 190 Query: 147 KTTTTASMQI--NLNSSDPL-----PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVY 199 + T +++ NL +S+ L PT+ +A DS K ++ + DS + +++Y Sbjct: 191 ASPLTVAVEYFGNLGTSETLQVSYYPTIPTVAA---DSPTNKWTMVIQDSASSDRTIAIY 247 Query: 200 FVKTGDNNWQVYT-----------QDSSDPNSIAKTATTLEFNAN----GTLVDGAMANN 244 ++ D T + P S + F+ + GT + A N Sbjct: 248 ELQFSDARSGGGTLLDLSGATPAGSPAVKPLSTFSPVAGVSFDVDPYGAGTPT-ASPAYN 306 Query: 245 IATG----AINGAEPATFSLSF-----LNSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 ATG A+ G+ T L+ +++ Q +G T+NG G+L +I+ Sbjct: 307 SATGQVTLAVGGSAANTLDLTLGRPGSASALTQVSGDFAQTGITKNGSPVGNLTGVEIDA 366 Query: 296 DGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTL 355 G + Y T+++ QI L + N GL + + ++ + SG L AG G G + Sbjct: 367 GGLIKATYDTGFTRVIYQIPLVDVPNYNGLTALNNQTFAISPDSGSFYLWDAGDGPTGDV 426 Query: 356 TNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A E S D+++EL N+I QR Y SNA+ I+T D++L NL+ Sbjct: 427 VGYAREGSTTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLK 473 >UniRef50_A9DSB3 Flagellar hook protein FlgE n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSB3_9RHOB Length = 422 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 112/428 (26%), Positives = 193/428 (45%), Gaps = 39/428 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A ++ + I +NIAN+ T G++ + F GS AG+ D Sbjct: 6 ALQIGVSGLQANSSRVQNISSNIANANTVGYRRTFSEFVTQNTGSTQ------AGVLTDV 59 Query: 62 -----TDGTTTNTGRGLDVAISQNGFFRL-------VDSNGSVFYSRNGQFKLDENRNLV 109 T+G T D+A+ +GFF + ++SN + +R G F D+N +L Sbjct: 60 RANISTNGNIVGTNSTTDLAVQGDGFFVVSRNANDPIESN--YYLTRAGSFTPDQNGDLR 117 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 N G L+G+P T + N + + + T S + ++ + P P Sbjct: 118 NSAGYFLSGFPTDAAGNTGSVSSTSYNDLSTVNIASYQVQGTPSSSVGVSGNVPAQETGP 177 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPN----SIAKT 224 + A + ++ + G + +++ + DN W V D + N ++ T Sbjct: 178 GTTGTA----FESTLRYVNQLGGSDALTLSWTPGAVDNEWTVSITDEAGTNYGDATVNFT 233 Query: 225 ATTLEFNANGTLVDGAMANNIATGAI-----NGAEPATFSLSF-----LNSMQQNTGANN 274 + + + + G + + ATG + NG P + F M Q +G Sbjct: 234 DSGADAGSPASYTPGTLPIDPATGVVTLSITNGGTPQALEIDFGAPGTFGGMTQFSGDYT 293 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 A T +G + G L +++D G + G + N Q + L Q+ LAN AN + + S N + Sbjct: 294 PPAFTDDGTETGSLERAEMSDSGVLFGVFDNGQRRALFQVPLANVANPDQMRSVDGNAYV 353 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 AT+ SG LG G++ + ALE SNVD+++EL ++I QR Y S+A+ I T D++ Sbjct: 354 ATRDSGAVSLGNPMLNGLGSINSNALEGSNVDIAQELTDLIQTQRAYSSSAKIITTSDEM 413 Query: 395 LNTLVNLR 402 L+ +N++ Sbjct: 414 LSETLNIK 421 >UniRef50_C4V4D1 Flagellar hook protein FlgE n=2 Tax=Selenomonas RepID=C4V4D1_9FIRM Length = 680 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 124/231 (53%), Gaps = 17/231 (7%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK----------TATTLEFNA 232 ++TV+DS G H + V F K +N W + D +I + T T L+F+ Sbjct: 455 TITVYDSLGAKHSVPVVFTKASNNKWTLSLGSGGDTFNITEADGTTTTVALTKTDLKFDT 514 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 +G+ V G + ++ NGA P +++ L ++ Q +G + I A + +G+ G L S Sbjct: 515 SGSYVSGTAS--LSLTYENGAAPQQVAMN-LAAITQYSGTSTIAADS-DGHAAGTLASVD 570 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 I+ G + G Y+N Q QI +A F N GL G N++ + +SG + +G + Sbjct: 571 IDSTGVITGTYTNGVRQKEAQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTI--SGASDI 628 Query: 353 GT-LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GT LT ALE SNVDL+ + +MI+ QR +QSN++ I D++L TL+N++ Sbjct: 629 GTELTTSALEMSNVDLADQFSDMIITQRGFQSNSKMITVSDEMLETLINMK 679 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 91/177 (51%), Gaps = 20/177 (11%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKV 48 AVSGL T +DV+GNNIAN T GFK+ +FADM + ++ Sbjct: 8 AVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASAPNGTIGGVNPKQI 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLG+ VA +T+G+ TG+ D+AIS+ +V FY+RNG F D NL Sbjct: 68 GLGMSVASTDLLYTNGSVQQTGKNTDIAISRGDGLFVVSKGQQKFYTRNGAFSFDAEGNL 127 Query: 109 -VNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + GL + GY A ++ G N TNI IP M A+TT TAS NLN++ P Sbjct: 128 TIPSTGLYVQGYMANNGVISV-AGDNTTNIRIPAGKSMEAQTTATASYTKNLNATTP 183 >UniRef50_C6BXM1 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM1_DESAD Length = 529 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/124 (45%), Positives = 80/124 (64%) Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +QNGY G L + +++ DG V G YSN Q L + LANF N GL EG N++S+T+ Sbjct: 405 SQNGYGAGFLQAVEVDRDGVVTGRYSNGQVLDLYVLTLANFNNQYGLRREGGNLFSSTRD 464 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG AL G AGTG G++ + LE SNVD+ E+V +I QR +Q+N++ I T DQ+L L Sbjct: 465 SGPALTGRAGTGPLGSIASNKLEQSNVDVGDEMVKLITTQRGFQANSKAITTADQLLGEL 524 Query: 399 VNLR 402 + L+ Sbjct: 525 IQLK 528 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 34/229 (14%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGIT 58 +SG+ A + + +IGNN+AN T GFK SF D F + +VG GV +A I Sbjct: 11 ISGIRAHSQAMSIIGNNLANGNTIGFKGARTSFEDSFYSAVNTGGGIGQVGHGVGIASIY 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFF--RLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 DF G + +VAI GFF R D++G+ +Y+R G F ++ L + G + Sbjct: 71 GDFKQGPFEPSSEATNVAIGGKGFFTVRHPDTDGT-YYTRAGNFIFNKQGVLTDPHGYVV 129 Query: 117 TGYPA-----TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVT-- 168 G+ +G P I PT+I + T+ +M +NL+S ++ VT Sbjct: 130 QGWKVNPNSESGKPDII---GTPTDIKLDRFQSPPVRTSEIAMNVNLSSKAEDKCNVTGQ 186 Query: 169 PFSASN------------ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD 205 PF + + AD Y + ++ FD G +HD+++YF D Sbjct: 187 PFFSLHQTWNGKNNPPIPADRYAFQNTIKTFDESGTSHDLTIYFDPVKD 235 >UniRef50_Q2LSZ5 Flagellar hook protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ5_SYNAS Length = 518 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 27/254 (10%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGITQ 59 +GLNA+ +D+IGNN+ANS+T G+KS FA+M + S +VG GV ++ + Sbjct: 21 TGLNASQRQMDIIGNNLANSSTLGYKSADTQFANMLSQSLTSGSGSFQVGQGVAISSVNT 80 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F G+ +TG D+AI GFF + D G+++Y+R G F +D++ LV++ G ++ G Sbjct: 81 KFDQGSFESTGSVTDMAIDGEGFFPVKDKEGAIYYTRAGAFVIDKDGYLVDVNGYRVQGI 140 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 P A T+I + N A T T + +NLN S+ T F S Sbjct: 141 NLFSAPGD----AELTDICLKNIQSAPSATKTFGIGVNLNDSEDAG--TSFVVSQ----- 189 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKT-GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVD 238 VFDS+G H++S+ F KT GD W + + +I + ++F+ +G L + Sbjct: 190 -----NVFDSKGAIHNLSLTFTKTEGDGYWGCQAK-LDNVETINSSCCGIKFDESGNLKN 243 Query: 239 GAMANNIATGAING 252 + + + GA++G Sbjct: 244 TYL-TSCSAGAVSG 256 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 1/128 (0%) Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 I A +GY G L S + DG + G ++N QT LGQ+VLANF N L G + ++ Sbjct: 391 IKALEVDGYTSGVLKSLSVEKDGIISGIFTNGQTSDLGQVVLANFPNVGALRKIG-SYFA 449 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 T SG A++ + GTG G + + +LE SN D+S E VNMI AQR YQ++A+ I T D++ Sbjct: 450 ETNFSGAAIINSPGTGGLGEIMSNSLEQSNTDVSMEFVNMINAQRAYQASARIITTSDEM 509 Query: 395 LNTLVNLR 402 L L+N++ Sbjct: 510 LTELMNIK 517 >UniRef50_B2A353 Putative uncharacterized protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A353_NATTJ Length = 508 Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 89/140 (63%) Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L ++Q G + + ++G G+L +Y+++ G + G Y+N +T+ LGQ+VL++F N Sbjct: 368 LGDVRQVAGESTVEGVAEDGQAQGELETYEVDSAGIITGTYTNGETRQLGQVVLSDFTNP 427 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 GL G ++ T++SG G AGTG G + GALE SNVD+ ++ +MIV QR +Q Sbjct: 428 GGLEKLGSGLYQPTRNSGEPSYGIAGTGGRGEIAPGALEMSNVDMGEQFTDMIVTQRGFQ 487 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +N+++I T D++L LVNL+ Sbjct: 488 ANSRSITTGDEVLQELVNLK 507 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 109/229 (47%), Gaps = 44/229 (19%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGS-----------KVG 49 VSGL T LD IGNN+AN T GFK +F D F A S +VG Sbjct: 8 GVSGLRNHQTRLDTIGNNVANVNTAGFKGDRVTFQDAFNQTLEAASAPNERGGTNPQQVG 67 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG+ + + T G+ NTGR D+AI +GFF +V+ S ++R G F +D NLV Sbjct: 68 LGMNIGSMDTIHTQGSLENTGRDTDLAIEGDGFF-VVNDGQSDMFTRVGNFGVDSEGNLV 126 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTN------ISIP-NTLMAAKTTTTASMQINLNS-S 161 + Q TGY G + A+ N + IP ++ + T NLNS + Sbjct: 127 S----QGTGYKVQGY--AYDEDADEINTDEIVDMEIPLGDVVDPEATENVKYNGNLNSNT 180 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV 210 +P TV+ +V VFD+ G+ H +++ F ++G+N WQ+ Sbjct: 181 EPGETVST-------------TVNVFDNLGSEHTLNLEFEESGENEWQM 216 >UniRef50_C6XM57 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM57_HIRBI Length = 458 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 201/451 (44%), Gaps = 61/451 (13%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-----FAGSKVGLGVKVAGITQDFT 62 +GL A A+ + NIAN T GFK F M + S V+ T Sbjct: 12 AGLRANASAMAATSENIANVNTVGFKRIRNDFTAMLNNQNYQSSYSAGAVRATATTLMRE 71 Query: 63 DGTTTNTGRGLDVAISQNGFF--RLVDSNGSVF----YSRNGQFKLDENRNLVNMQGLQL 116 GT ++ +AIS G+F R + + F Y+R GQF DE L N G L Sbjct: 72 QGTLQSSSVSTHMAISGEGYFVTRARGGDATSFDEYSYTRAGQFAPDEGGYLKNTAGQYL 131 Query: 117 TGYPATGTPPTIQQGANPTNISIPNTLMA------AKTTTTASMQINLNSSDPLPTVTPF 170 G+P A+PT+++ + + A+ + S+ NLN+ + T + Sbjct: 132 YGWPIVNDQVV---NASPTDLTALSAVRVSGYGGVAEASANLSITANLNADQEVNPAT-Y 187 Query: 171 SASNADSYNKKGSVT----VFDSQGNAHDMSVYFVKTGD-NNWQV--YTQDSSDPNSIAK 223 +A + + N T V+DS+G H ++ F+KT + N W+V Y S+D + Sbjct: 188 TAGDMAAGNITPDFTTPLEVYDSKGGRHTVNFSFLKTANANEWEVEAYVTPSTDIEGVTD 247 Query: 224 TATT---LEFNANGTLVDGAMANNIATG-------AINGAEPAT---------------- 257 + F A+G L+D N +A G +I ++PA+ Sbjct: 248 GLLANGKMIFTASG-LIDPVATNALADGFDPEGSISIGASDPASVGTTPRWADGLGIEAQ 306 Query: 258 -FSLSFLNS-----MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 L N + Q + + + +T +G G L S +++DG V+ Y+N ++ + Sbjct: 307 DIQLDLGNGNSTTGLTQYSSDSILDTSTVDGVPFGSLASVDVDEDGVVIAQYTNGFSRKI 366 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 Q+ +A F N GL ++ + + +G L +G G + + ALE+S VDL++E Sbjct: 367 FQVPVATFGNEGGLIAQAGGSYRSGPETGDMNLRAPKSGEAGEVISSALESSTVDLAEEF 426 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 N+IV QR Y + ++ I T D++LN L++++ Sbjct: 427 SNLIVTQRAYSAASKIITTADEMLNELISIK 457 >UniRef50_D0XNJ6 Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XNJ6_9CAUL Length = 478 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 132/473 (27%), Positives = 209/473 (44%), Gaps = 73/473 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGI---T 58 A VSGL A + L I NIAN T G+K A F+ + G G G+ T Sbjct: 6 ALLAGVSGLTANSAALAAISQNIANVNTVGYKRTAAEFSTVVNSQSQGAGYSAGGVLANT 65 Query: 59 QDFT--DGTTTNTGRGLDVAISQNGFF------RLVDSNGSVFYSRNGQFKLDENRNLVN 110 +++ G T D+ I+ GFF +D+ + ++R G F++D L N Sbjct: 66 RNYIAQGGQLQRTTSSTDLGIAGQGFFVTTEKAEGLDAGDARLFTRAGAFRVDNFGYLKN 125 Query: 111 MQGLQLTGYP--ATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--- 164 GL L G+P A G PT T+I++ + A+ TT A + NL SS + Sbjct: 126 TAGLYLQGWPVNAEGDIPTDPSDLGKLTSINVGSVGGTAEATTRAQVNANLKSSQAVSAD 185 Query: 165 --------PTVTPFSASNADSYNKKGSVT--VFDSQGNAHDMSVYFVKTGD-NNWQ--VY 211 +++ ++A+ + +T V DS+G ++ F+KT + N WQ V+ Sbjct: 186 IATYSTATKSMSTYNATTGTGFKPDFQITVPVSDSKGGQRTVAYSFLKTANPNEWQTEVH 245 Query: 212 TQDSSD-------PNSIAKTATTLEFNANGTL-VDGAMANNIAT-GAINGAEPATFSLSF 262 +SD N I K+ L F +G L VD A AT G++ A+P+ S++ Sbjct: 246 VIPASDIDNGTTPSNGILKSGLVL-FTQDGRLDVDAMKARETATPGSMLFADPSVASITL 304 Query: 263 ------------------LNSMQQNTG--------------ANNIV-ATTQNGYKPGDLV 289 L QN +++IV A NG G+L Sbjct: 305 GASDAAAGTAAAPKWKTSLGIDNQNVSFDLTASAGGLTQYDSDSIVQAVVTNGTAFGNLS 364 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 + +I+++G V + N T+ + Q+ LA F + + L N + +Q SG L T G Sbjct: 365 NIEIDEEGYVTAIFDNGVTRRIAQVALATFTSADSLTPASGNAYRVSQGSGTFNLKTPGA 424 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G + LEAS VDLS E +I QR Y ++++ I T D++L L++++ Sbjct: 425 GGAGLIGASQLEASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAELISIK 477 >UniRef50_C7LRK3 Putative uncharacterized protein n=2 Tax=Desulfovibrionales RepID=C7LRK3_DESBD Length = 562 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/155 (41%), Positives = 94/155 (60%), Gaps = 3/155 (1%) Query: 248 GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQ 307 GAING A+ +S L+S +TG+ I Q+GY G L + ++ DG + G YSN Q Sbjct: 410 GAINGF--ASTEISALSSTNYSTGSTTIFQA-QDGYTAGFLQNISVDRDGVITGRYSNGQ 466 Query: 308 TQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDL 367 L + LA F NN L EG N++S T+SSG + G A TG G++ + +LE SNVDL Sbjct: 467 VLQLFAVTLATFNNNYALYREGGNLFSETRSSGPPITGLANTGGKGSIASNSLEQSNVDL 526 Query: 368 SKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + E V MI ++ +Q+N++TI T DQ+L L+ L+ Sbjct: 527 ATEFVKMITTEKGFQANSKTITTVDQMLTVLIQLK 561 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 38/231 (16%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GS-KVGLGVKVAGITQ 59 SGL A ++ VIGNNI+N +T GFK F D + GS +VG GV V + Sbjct: 12 SGLKAHGEDMTVIGNNISNVSTIGFKGSRMYFEDALSQQITTASGSGQVGRGVSVGTVMG 71 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNLVNMQGLQLTG 118 DF+ G+ +T D+AI NGFF + + V +Y+R G F+ DE LV+ +G +L G Sbjct: 72 DFSQGSLESTTEATDLAIGGNGFFMVSPAGQEVNYYTRAGNFRFDEEGYLVDPRGYRLQG 131 Query: 119 YP-------ATGTPPTIQQGAN-------PTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + A + T Q P ++ + N + T+ + +N++SS Sbjct: 132 WEVQQANTSAAASGDTTAQATTGVQILGVPQDVKLENFQSPPQATSRVDLILNVDSSSED 191 Query: 165 PTVTP----------FSASNAD-----SYNKKGSVTVFDSQGNAHDMSVYF 200 +V+P + A+ A+ SY + ++ V+D G++H+M+VY Sbjct: 192 KSVSPTDPFTALFDTYDATAAEPIGEASYAYQTTIKVYDENGSSHNMTVYM 242 >UniRef50_D2L1Z5 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1Z5_9DELT Length = 551 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 85/268 (31%), Positives = 144/268 (53%), Gaps = 37/268 (13%) Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-----GD------------NNWQV 210 TPF + A G++T FDS G+ +MS Y +K GD N + V Sbjct: 287 TPFGGTEAAGLLMTGTMT-FDSSGSMENMSAYTMKASNATPGDFDATQWTAADVSNGYPV 345 Query: 211 YTQDSSDPNSIAKTATT-------LEFNANGT--LVDGAMANNIATGAINGAEPATFSLS 261 +T + ++ + T +T L F + GA +++AT G +PA Sbjct: 346 FTANFKSVSNASFTNSTNNPLNIALNFGISNIAGFSAGASGSSLATA---GHDPANLVHF 402 Query: 262 FLNSMQQNTG-------ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 ++M+ N+ +++ V ++QNGY G L + ++ DG + G++SN QTQ L + Sbjct: 403 NPSTMKVNSNVTTNYATSSSTVFSSQNGYTSGLLNNVSVDADGILTGSFSNGQTQKLWAL 462 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 LANF N +GL+ EG N+++AT SG A TG+ G+++ LE+SNVD++ E+V+M Sbjct: 463 ALANFTNLQGLSREGSNLYAATLESGQGTTNRANTGSVGSISGNTLESSNVDMATEMVSM 522 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNLR 402 I+ QR +++N++TI T D +L+ ++ L+ Sbjct: 523 ILTQRGFEANSKTITTVDSMLSEVIQLK 550 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 62/263 (23%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSK-VGLGVKVAGIT 58 VSGL A +T + IGNN+AN T GFK F D+ AG K +G GV+V + Sbjct: 13 VSGLLANSTKMSTIGNNLANVNTVGFKGARTDFMDLMSANIGTAAGDKQIGRGVRVGTVV 72 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRL-----VDSNGSV--------FYSRNGQFKLDEN 105 D++ G T LD+AI+ NGFF + V SNG + +YSR G F D + Sbjct: 73 SDYSQGGLETTSNSLDMAINGNGFFMVKQKSQVGSNGKMLNTGNQTNYYSRAGNFSFDSD 132 Query: 106 RNLVNMQGLQLTGYP----------ATGTPPTIQQGANPTNISIPNTLMA-----AKTTT 150 LV QGL + G+ A+GT + Q P + I + ++ AK T+ Sbjct: 133 GYLVTPQGLAVQGWKVDQERIDAANASGT--VLSQ--TPVSGEIQDIRLSQFTSPAKATS 188 Query: 151 TASMQINLNSSDPLPTVTPFSASNAD--------------------SYNKKGSVTVFDSQ 190 + ++ NL+S + + SASNA+ +Y+ + +V V+D Sbjct: 189 SVTLITNLDSD--TKSASTRSASNANYYYAMTESWDGTQDPAMPSTAYSYQTTVKVYDEN 246 Query: 191 GNAHDMSVYFVKTGDNNWQVYTQ 213 G+ H ++ Y+ K D N + Y + Sbjct: 247 GSPHTLTTYYDKVADVNGKEYWE 269 >UniRef50_C4XMS5 Flagellar hook protein FlgE n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMS5_DESMR Length = 550 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 85/127 (66%) Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 V ++QNGY G L S ++ DG + G +SN QTQ L + LANF N +GL+ +G N+++A Sbjct: 423 VFSSQNGYTSGLLTSVSVDSDGILTGTFSNGQTQKLWALALANFTNLQGLSRQGSNLYAA 482 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG A TG+ G+++ LE SNVDL+ E+V+MI+ QR +++N++TI T D +L Sbjct: 483 TLDSGQGTTNRANTGSVGSISGNTLETSNVDLATEMVSMILTQRGFEANSKTITTVDSML 542 Query: 396 NTLVNLR 402 + ++ L+ Sbjct: 543 SEVIQLK 549 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 90/300 (30%), Positives = 131/300 (43%), Gaps = 72/300 (24%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSK-VGLGVKVAGIT 58 VSGL A +T + IGNN+AN TYGFK F D+ AG K +G GV+V I Sbjct: 13 VSGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIGRGVRVGTIV 72 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRL-----VDSNGSVF--------YSRNGQFKLDEN 105 D++ G T LD+AIS NGFF + V SNG + Y+R G F D + Sbjct: 73 SDYSQGGLETTSENLDMAISGNGFFMVKQKSQVGSNGKMLNTGNTTTYYTRAGDFSFDSD 132 Query: 106 RNLVNMQGLQLTGYP----------ATGTPPT-IQQGANPTNISIPNTLMAAKTTTTASM 154 LV QGL + G+ A+GT + + +I + AK T++ +M Sbjct: 133 GYLVTPQGLAVQGWKVDQDRIDAASASGTVLSQVPVTGEIQDIRLTQFTSPAKATSSVTM 192 Query: 155 QINLNSSDPLP-------------------TVTPFSASNADSYNKKGSVTVFDSQGNAHD 195 L+S T +P S A Y + ++ V+D G+ H Sbjct: 193 VTQLDSDTTTQNTRTAGTNYYYAMTEQWDGTASPAMPSTA--YGYQSTLKVYDENGSPHT 250 Query: 196 MSVYFVKT----GDNNWQ-VYTQDSSDP-------NSIAKTAT-------TLEFNANGTL 236 ++VY+ K G + W+ T D S+ N IA T T T+ F+++G+L Sbjct: 251 LTVYYDKVVSEDGKDYWEYCVTCDPSEDGRVDSAGNPIAGTETAGLLMTGTMTFDSSGSL 310 >UniRef50_A8U5X1 Flagellar hook protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5X1_9LACT Length = 289 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 19/211 (9%) Query: 195 DMSVYFVKTGDNNWQVYTQDS---SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAIN 251 D S + VK GDN + YT+D +DPN T+ L+ V G +AN A N Sbjct: 94 DSSFFTVKEGDNTF--YTRDGGFYTDPNGNLVTSGGLK-------VQGFVANPPAVNDTN 144 Query: 252 GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 P TF + A I + G DL SY ++ G +VG+YS ++ +L Sbjct: 145 -FNPDTFVDG------KTMSAITIPQSIGEGADKADLQSYSVDSKGFIVGSYSGGKSMVL 197 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 G++ L +F+N +GL G N+++ T +SG G+ G +G++ +G LE SNVDL+ E Sbjct: 198 GRVGLTSFSNPDGLQKSGGNLYTETANSGAPEAGSPGEPGYGSVRSGFLEMSNVDLANEF 257 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 MIV R+YQ+N+++I T D +L L+NL+ Sbjct: 258 TEMIVTSRSYQANSRSITTSDTMLEELINLK 288 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 23/163 (14%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------GSKVGLGVKV 54 V+G+ T +DVI NNIAN T FK+G F DM + +VGLGV+V Sbjct: 8 GVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRFEDMLSQTNASAQTGINAQQVGLGVQV 67 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNG---FFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 I + G+ +TGR LD I +NG FF + + + + FY+R+G F D N NLV Sbjct: 68 GSIDTVMSGGSLQSTGRALDFGI-ENGDSSFFTVKEGD-NTFYTRDGGFYTDPNGNLVTS 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASM 154 GL++ G+ A PP + N TN + P+T + KT + ++ Sbjct: 126 GGLKVQGFVA--NPPAV----NDTNFN-PDTFVDGKTMSAITI 161 >UniRef50_A6Q2N3 Flagellar basal body and hook protein FlgE n=2 Tax=Bacteria RepID=A6Q2N3_NITSB Length = 533 Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 91/278 (32%), Positives = 138/278 (49%), Gaps = 28/278 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------KV 48 +F SGLNA T L VI +NIAN T GFK +F+D+ A S ++ Sbjct: 4 SFYTGNSGLNANKTWLGVISDNIANVNTNGFKQERVNFSDLVASSLTTYSSSGAPRNKEI 63 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRN 107 G G VAG +DF+ G+ NT + L +A+ GFF + + + + +Y+R G F++D N + Sbjct: 64 GGGAFVAGTIKDFSQGSFKNTNQPLSLALDGEGFFMVKNPSADLTYYTRAGDFRVDANGD 123 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTA-SMQINLNSSDPLPT 166 ++N GL+L G+ T GA + I+IPN L T A NL++ T Sbjct: 124 VINPAGLKLQGWMLDETGNI--AGAMGS-INIPNNLDPKNTDKVAFENPANLDAGVDAIT 180 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI----- 221 T F S+ +Y+ ++T +DS G +H + YF+KT N W+V+TQ D ++ Sbjct: 181 KT-FDPSDPTTYHYVNTITTYDSLGTSHVLKHYFIKTDINTWRVFTQ--LDDRAVTYNDG 237 Query: 222 --AKTATTLEFNANGTLVDGAMANNIATGAINGAEPAT 257 A L+FN G L + AT + +E AT Sbjct: 238 TNEYAALELKFNGKGELTSAQYISQPATQSEAASEAAT 275 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 2/128 (1%) Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 I QNG GDL+S + +DG + G Y+N Q + + ++ +A F + E L +GDN++ Sbjct: 407 IFYAQQNGASKGDLMSISVTEDGIIKGTYTNGQVKDVARLAVATFKDKEILVRKGDNLYL 466 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 Q + ++ G + +G LE SNVD+S+E +N+I AQR YQ+NA+TI T DQI Sbjct: 467 PNQQTFTPIIVPGGV--ISKIRSGMLEMSNVDISQEFINLITAQRAYQANAKTITTSDQI 524 Query: 395 LNTLVNLR 402 L T ++++ Sbjct: 525 LQTTMDIK 532 >UniRef50_UPI0001C35D09 hypothetical protein ChatD1_21894 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35D09 Length = 664 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 33/194 (17%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AG----------SKV 48 AVSG+ A T LDVIGNNIAN TYGFKS A F D+F AG S+V Sbjct: 8 AVSGMKAHQTKLDVIGNNIANVNTYGFKSSRARFQDVFYQTLQSAAGGDNNKGGTNASQV 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR-N 107 G G ++ GI D + +TGR LDVAI+ GFF+++D++G++FY+R G LD N N Sbjct: 68 GYGSQLGGIDLDMSRSALQSTGRPLDVAIAGEGFFQVMDADGNIFYTRAGNLMLDSNSGN 127 Query: 108 LVNMQG---LQLTGYPATGTP---------PTIQQGANPTNISIPN---TLMAAKTTTTA 152 LV+ G L ++G P P PT G ++I T+ + K TT A Sbjct: 128 LVDSNGYTVLGVSGDPLGKAPSSDKIHLNIPTKSSGLASKTLTINGTQFTITSEKATTDA 187 Query: 153 SMQINLNSSDPLPT 166 ++ I + D LP+ Sbjct: 188 NVSITFKAEDNLPS 201 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 4/129 (3%) Query: 278 TTQNGYKPGDL----VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 T +NG + G + S I +G + + ++ +G+I L F N GL G++ + Sbjct: 535 TLENGTEGGAISLSGASIAILGNGIIEATHPDKGKIQIGRIDLVTFENPYGLEESGNSYF 594 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 AT +SG A AG G L +LE SNVD+S E +MIV QR +Q+N++ I D Sbjct: 595 RATSNSGEAKACQAGEDGTGALKTSSLEMSNVDISTEFSDMIVTQRGFQANSRIITVSDS 654 Query: 394 ILNTLVNLR 402 IL LVNL+ Sbjct: 655 ILEELVNLK 663 >UniRef50_Q1MQV7 Flagellar hook protein FlgE n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQV7_LAWIP Length = 690 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 86/139 (61%) Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 N+ G ++ + +QNGY GDL++Y +N +G + G YSN L Q+ L +F + + Sbjct: 551 NAFTNYAGGSSTKSASQNGYGFGDLMNYSVNAEGVLFGVYSNGVQLPLYQVALYDFNSKQ 610 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL EG N++S T+ SG G A T FG++ LE SNVD+S E V+MI QR +QS Sbjct: 611 GLRREGGNLFSQTRESGDPSSGAANTSGFGSINANTLEGSNVDISTEFVSMIATQRGFQS 670 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ + T DQ+L T+VN++ Sbjct: 671 NSKIVTTIDQMLETVVNMK 689 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 117/273 (42%), Gaps = 64/273 (23%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AG-SKVGLGVKVAGIT 58 VSGL + ++VIGNNIAN T GFK FAD AG +++G GV + + Sbjct: 11 VSGLLSHGEKMNVIGNNIANVNTVGFKGQRMDFADFIYQDGFSTAGITQIGRGVGIGAVM 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQGLQL 116 +F G+ T D+AI GFF+ V GS +Y+R G F+ + + LV+ G L Sbjct: 71 GNFGQGSFETTTEATDLAIGGRGFFK-VKPQGSETSYYTRAGNFRFNNDGYLVDPHGYAL 129 Query: 117 TGYPATGT--PPTIQQGAN-------------PTNISIPNTLMAAKTTTTASMQINLNSS 161 G+ T P I G N PT+I + +A TT S +NL+S Sbjct: 130 QGWKIDNTEGPQRISGGVNPGTNTSQIMGTGEPTDIRLDTWTVAPLQTTNVSFNVNLSSD 189 Query: 162 D----------PL--------------PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMS 197 P P P S +Y+ + S+ V+D G H ++ Sbjct: 190 KSGDKSQNVNSPFTSLFNIWNGKQPSEPNNPPMPES---AYSYQTSIKVYDEAGGTHTLT 246 Query: 198 VYFVK----------TGDNNWQ-VYTQDSSDPN 219 VYF + +G++ W+ V T D S+ N Sbjct: 247 VYFDQVSPKDYKGGGSGESVWEYVVTMDPSEDN 279 >UniRef50_C1SLD6 Flagellar hook protein FlgE n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD6_9BACT Length = 829 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 36/248 (14%) Query: 183 SVTVFDSQGNAHDMSVYFVKTG--DNNWQVYTQDSSDPNSIAKTATT-----LEFNANGT 235 S T++D+QGNAH + F + DN W++ D I+ TT + FNANG+ Sbjct: 589 SQTIYDAQGNAHTVQYNFEMSDSLDNVWKLTVSTPDDGAEISFNETTGNQVYMHFNANGS 648 Query: 236 LVDGAMANNIATGAINGAEPATFSLSF--------LNSMQQNTGA-------------NN 274 N + T + G A+ S+++ ++ ++ + G + Sbjct: 649 F------NYLTTES--GQRIASLSMNYDTGGGAGVVSDIEMDLGTAGKFDGIYISSDDSG 700 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 I Q+GY G L S N +G ++G Y+N Q + QI A F N GL GD + Sbjct: 701 ITKAAQDGYATGLLESTLFNSNGEIIGYYTNGQVATIAQIATATFTNPGGLTKVGDTTFQ 760 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 + +SG +G GTG G + LE SNVDLS E VNMI QR +Q+N++ I T D++ Sbjct: 761 KSSNSGDPAIGRPGTGFRGKVAAETLENSNVDLSTEFVNMITTQRGFQANSRVITTSDEM 820 Query: 395 LNTLVNLR 402 L L++L+ Sbjct: 821 LQELMSLK 828 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 47/230 (20%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKV 48 A+SGL+ +DV+GNNI+N T G+KSG A F DM + ++V Sbjct: 8 AISGLSVNQQAMDVLGNNISNVNTVGYKSGRAVFEDMLSQTLVGSTAPSDTLGGTNSTQV 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRN 107 GLG +AG+ F G+ +T D+AI +GFF + + S + Y+R G F+ D + + Sbjct: 68 GLGTSLAGVDTIFETGSMQSTSVNTDLAIQGDGFFVIKGAGSSDLLYTRAGDFRFDTSGS 127 Query: 108 LVNMQGLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 LV G + G+ P TG T + +S AK T+ AS+ L+ +D Sbjct: 128 LVTSSGFYVQGWMVDPDTGELLT-EGTTEDIVLSSAYQTAQAKVTSEASLAGVLD-TDAD 185 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD 214 P++ + + +++ TGD+ +QVY+ D Sbjct: 186 PSIVSYPS------------------------LLHYADTGDSIFQVYSDD 211 >UniRef50_Q4JMN8 Predicted flagellar hook protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMN8_9BACT Length = 1387 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 84/128 (65%) Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 ++ Q+G+ G L +I+ GT+ NY+N Q LG+IV+ANF N GL G+ ++ Sbjct: 1259 VLTVEQDGFTSGRLDGIEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYT 1318 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 T SG +G AG+ FG + +G+LE SNVD+++ELVN+I AQRN+Q++A+ I+T + Sbjct: 1319 ETAVSGTPQVGEAGSEGFGNILSGSLERSNVDITEELVNLITAQRNFQASAKAIETTTGL 1378 Query: 395 LNTLVNLR 402 T++N+R Sbjct: 1379 TQTIINIR 1386 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 17/220 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F A++GLN ++ ++ NNIAN T GFK F D+F A S +G G Sbjct: 1 MSFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNASSSIGSGTI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNM 111 + GI Q FT G + LD+AIS GFF L S + Y+RNG ++ +R +V+ Sbjct: 61 LKGIKQQFTQGNIAASLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVNNDRYVVDS 120 Query: 112 QGLQLTGYPA-TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP- 169 G L YP T T + + + +P T + T+ + +N+N++ + T P Sbjct: 121 AGQFLLTYPVNTDGSVTAKDLDSAVPLQLPVTSGDPQATSNIKLGVNVNAASDVVTDRPQ 180 Query: 170 ------FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT 203 F ++ +++ S+T+FD GN +VYF+KT Sbjct: 181 FQDGYTFDPNDPETFTNSTSITIFDDLGNPTIATVYFIKT 220 >UniRef50_Q2RRL4 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRL4_RHORT Length = 442 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 123/433 (28%), Positives = 192/433 (44%), Gaps = 59/433 (13%) Query: 17 LDVIGNNIANSATYGFKSGTASFADMFAGSKVGL---GVKVAGITQDFTDGTTTNTGRGL 73 L I N+AN T G+K +F + + S GVK + G TGR L Sbjct: 21 LGQISTNVANINTTGYKQVDTNFKTLLSESTANFDFFGVKPVDYRRVSEQGGLLTTGRNL 80 Query: 74 DVAISQNGFFRL---VDSNGSVFYSRNGQFK-----------LDENRNLVNMQGLQLTGY 119 DVAI G F + D +G FY+R+G F + N L G + G+ Sbjct: 81 DVAIGGQGLFMVNQQADLSGETFYTRDGSFGARVAKETVGKVVAGNSYLSTQDGYYVMGW 140 Query: 120 PATGTPPTIQQGANP--TNISIPNTLMAAKT----------------TTTASMQINLNSS 161 A +Q G P N + T+ A+ TT A ++ N+N+ Sbjct: 141 AAD--QAAVQAGTEPFPVNDTKTGTITGARALSPIQLNTRAEADGQATTAAVVRANINA- 197 Query: 162 DPLPTVT-----PFSASNADSYNKKGSVTVFDSQGNAHDMSVYF--VKTGDNNWQVYTQD 214 L T T P + G+ + S ++S+ F V N+W V D Sbjct: 198 --LATTTQSLGIPVWGPEVTTTAADGTTS---STWPRQNVSLEFTPVAGTQNSWTVAVSD 252 Query: 215 SSDPNSIAKTATTLEFNANGTLV---DGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 + + T + FN +GTL+ DG +A +A NG T ++ ++++ Q +G Sbjct: 253 PNGGTTGTATPAQVTFNGDGTLLSPDDGQLA--VAVTYANGTT-GTIAVD-IDALTQVSG 308 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 A I NGYK G L+S I+ G + G YSN QT L ++ L +F N+ L + G N Sbjct: 309 ATQIRNLDTNGYKEGSLISTNIDASGVLSGTYSNGQTLPLYKLALTDFQANDHLEAIGKN 368 Query: 332 VWSATQSSGVALLGTAGT-GNFG-TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 ++ A+ ++G + + +A + + G T+T+GALE S VDL + MI Q Y S+A + Sbjct: 369 LYRASDAAGESRIFSADSAASVGTTVTSGALEQSTVDLGDQFSKMITTQTAYSSSATVFR 428 Query: 390 TQDQILNTLVNLR 402 T D++ T+ L+ Sbjct: 429 TCDEMSQTVSGLK 441 >UniRef50_B8FK43 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK43_DESAA Length = 693 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 82/138 (59%) Query: 265 SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 S Q A N GY GDL ++ DG + G+YSN Q + L +I LA F N +G Sbjct: 555 STTQYASAGNTTYQATTGYGVGDLDGISVSSDGVITGSYSNGQIKPLFRIALAKFNNVQG 614 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L G N+++AT++SG A+ GT GT+T+ +LE SNVDL+ E V MI QR YQ+N Sbjct: 615 LQKMGQNMFAATRNSGDAITNKPGTNGLGTITSNSLEQSNVDLANEFVKMITTQRGYQAN 674 Query: 385 AQTIKTQDQILNTLVNLR 402 ++ I DQ+L ++NL+ Sbjct: 675 SKVITVTDQLLQEVINLK 692 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 10/128 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +SG+N ++ VIG+NIAN +T GFKS +F D+ A + ++G G Sbjct: 6 ALFSGISGMNTLGNSMTVIGDNIANVSTVGFKSSRVTFQDVLAQTVSTQSGTGQLGRGAA 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNM 111 + IT F+ G+ +T D+AI GFF + D +++R G+F+ DE+ N VN Sbjct: 66 MGDITGIFSQGSLESTDSATDLAIGGEGFFVVRDPENVNLEYFTRAGEFRFDEDGNFVNP 125 Query: 112 QGLQLTGY 119 G + G+ Sbjct: 126 SGYLVRGW 133 >UniRef50_C1A555 Flagellar hook protein FlgE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A555_GEMAT Length = 506 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 96/158 (60%), Gaps = 4/158 (2%) Query: 249 AINGAEPATFSLSF---LNSMQQ-NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 A+ GA P L+ +N + Q + ++ V QNGY G L ++ I+ G + G ++ Sbjct: 348 AVPGANPVRIDLTLGGGVNGLTQFASTSSTAVLRDQNGYTAGTLQNFSIDRFGLITGFFT 407 Query: 305 NEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASN 364 N T L +IVLA+F N GL GDN++ + +SG A+LG A G+ +T+GALE SN Sbjct: 408 NGTTSPLARIVLADFNNPSGLLRIGDNMYQESANSGGAVLGFALEGSQSQMTSGALEMSN 467 Query: 365 VDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 VDL++E NMIVAQR +Q+N + + T D++L L+ ++ Sbjct: 468 VDLAQEFTNMIVAQRGFQANGKVVSTSDEMLQELMTIK 505 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 108/238 (45%), Gaps = 53/238 (22%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTAS----FADMFAGS-------------KVG 49 VSGL +DVIGNNIAN T FK+G + FA + AG+ ++G Sbjct: 9 VSGLRNNQVRMDVIGNNIANVNTVAFKAGRVTFKEGFAQLLAGASRPPGDQGGINPIQIG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LG+++ I Q F G TG D+AI + FF + N S FY+R G F++D LV Sbjct: 69 LGMQIGSIDQIFNQGNLETTGLNTDIAIQGDSFFVVRKGNQS-FYTRAGNFQVDALGQLV 127 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTN---------ISIP-NTLMAAKTTTTASMQINLN 159 + PA G I QG N I +P ++A TT + NLN Sbjct: 128 S---------PANG---FIVQGRMYENGQLQDGIQDIRLPFGQKVSANPTTDMKLAGNLN 175 Query: 160 SS---------DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNW 208 +S DP+ P N ++ + + VFDSQG HD+ + KTG N+W Sbjct: 176 ASAPVFQGDFNDPMDRALPI---NEKAWTET-QIGVFDSQGTKHDVKLQMWKTGPNSW 229 >UniRef50_Q7UII2 Flagellar hook protein FlgE n=1 Tax=Rhodopirellula baltica RepID=Q7UII2_RHOBA Length = 811 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 3/199 (1%) Query: 207 NWQVYTQDSSDPNSIAKTATT--LEFNANGTLVDGAMAN-NIATGAINGAEPATFSLSFL 263 W + D+S S T T ++F+ NG V +I + P F + F Sbjct: 612 RWYADSPDNSVSGSTDITVGTGLIQFDGNGNFVTATEETISINRQGLPSVSPMQFEMDFS 671 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 T + AT Q+G +PG L S+ + +DGT+ G +SN ++ LGQ+ LA FAN Sbjct: 672 LVSGLATDEATLAATQQDGSEPGVLNSFIVGEDGTIRGVFSNGISRDLGQLQLARFANPA 731 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL + G N+++ ++G+ + G G GT+ GALE SN D+ K+LV +++A Y+ Sbjct: 732 GLEARGLNLYAEGVNTGLPVTGQPGENGIGTVIGGALELSNTDIGKDLVELVLASTQYRG 791 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ I T Q+++ L+NLR Sbjct: 792 NSRVITTTQQLIDELLNLR 810 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 17/135 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AG--------- 45 A + A++GL+AA T +DVIGNN+AN+ T GFKS A FA F AG Sbjct: 6 ALTTALTGLSAAETQIDVIGNNLANAQTVGFKSSDAVFATQFLQTLSLGAGPSANNGGTN 65 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLGV+VA I + GT + D+AI +GFF++ ++G Y+RNG FKL+ Sbjct: 66 PRQIGLGVQVAEIAANHNQGTIEISSSSSDLAIQGDGFFQVQAADGEKLYTRNGIFKLNS 125 Query: 105 NRNLVNMQGLQLTGY 119 + LVN G +L GY Sbjct: 126 DAELVNATGQRLLGY 140 >UniRef50_B0ULI9 Flagellar basal body FlaE domain protein n=10 Tax=Rhizobiales RepID=B0ULI9_METS4 Length = 456 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 134/458 (29%), Positives = 203/458 (44%), Gaps = 67/458 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK--VGLGVKVAGITQ 59 A AVSGL A A +L+ I NIAN+ T G++ +FAD+ A VA +Q Sbjct: 6 AMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRIDTTFADLLAEQPNDRQTSGSVAASSQ 65 Query: 60 DFTD---GTTTNTGRGLDVAISQNGFFRLVDSNGSV----------FYSRNGQFKLDENR 106 FT+ G +TG ++A++ GFF + + + Y+R G F +D++ Sbjct: 66 -FTNTLQGNIASTGITTNMALNGGGFFVVRTPSATSGGQPSFTSQDLYTRRGDFAVDKDG 124 Query: 107 NLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL-- 164 LVN G L G P T Q N I I N + A+ TTT S NL S+ Sbjct: 125 YLVNGAGSYLVGQSLD--PRTGQATGNGV-IRIGNQALPAQATTTISYAANLPSTPGTTG 181 Query: 165 PTV-----------------TPFSASNADSYN------KKGSVTVFDSQGNAHDMSVYFV 201 P V +P + + +DS + GS+T + + G ++ + + Sbjct: 182 PAVLGALAGGDVRVMSGTSASPATVAASDSGSFLASSLSGGSLTAYSAAGGPVNLQLRWA 241 Query: 202 K---------TGDNNWQVY--TQDSSDPNSIAKT--ATTLEFNANGTLVDGAMAN-NIAT 247 K TGD W ++ Q+ +D + A T T FNA+G L A + I Sbjct: 242 KVAAADSAAGTGDT-WNLFYAKQNGTDSTATAWTNAGTAFTFNASGQLTTPAGGSATIPN 300 Query: 248 GAINGAEPATFSLSFLNSMQQNTGANNIVATT----QNGYKPGDLVSYQINDDGTVVGNY 303 ++G T +L+ + GA TT QNG G L S + DG V G Y Sbjct: 301 VTVDGVPLGTLTLNTASGGLTQYGAAGGQVTTNTLQQNGSASGTLRSLAVTSDGRVTGTY 360 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 SN T L Q+ +A F + L +E ++ T SG + G AGT T+ G +E S Sbjct: 361 SNGTTATLAQVGIARFNAPDALKAESLGNYAQTVESGGPVSGLAGT----TVVGGNVEQS 416 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 N D + E +I+ Q+ Y +N + + T Q+++ LVN+ Sbjct: 417 NTDTANEFSKLIITQQAYSANTRVMSTAQQMMSDLVNI 454 >UniRef50_C2BUK6 Flagellar basal body and hook protein n=3 Tax=Mobiluncus RepID=C2BUK6_9ACTO Length = 484 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 3/149 (2%) Query: 254 EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 +P LS L G NN +G G + Y + DGT+ G +SN + L + Sbjct: 338 QPINLDLSALTGF---GGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALAR 394 Query: 314 IVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVN 373 I +A+FAN GL G + + T +SG +G AGTG G +T GA+E SNVDL+ E N Sbjct: 395 IAVASFANPLGLEKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTN 454 Query: 374 MIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +I++QR +Q+N++ I T D+IL LVN++ Sbjct: 455 LILSQRGFQANSRVITTSDEILQELVNMK 483 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 105/217 (48%), Gaps = 24/217 (11%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA------------------GSKV 48 +SGL+ T LDV NNIAN T GFKS + F D F+ ++V Sbjct: 9 ISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNERGGMNPAQV 68 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLGVK+ ITQ+FT G TGR LD I+ +GF+ L +NGS Y+RNG F LD + Sbjct: 69 GLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSFGLDAQGQV 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL---P 165 V G + G+ TI P NI++P T TT + +D + P Sbjct: 129 VAADGSFVQGWMGD-KDGTINASGTPGNITLPLTKTVEGRPTTKVIYGGNIPADQIYMDP 187 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 T + S NA + + V +D +GN HD+ + F + Sbjct: 188 TGSKTSPDNA--FQRSQIVHAYDDKGNPHDVLLTFAR 222 >UniRef50_Q1NLV6 Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NLV6_9DELT Length = 1069 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 75/123 (60%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+G+ G L S ++ G + GNYSN Q + Q+ LA+FAN +GL G N++ AT S Sbjct: 946 QDGFAAGFLQSVSVDTAGIITGNYSNGQVLMRAQVALADFANLQGLHKVGGNIFRATTQS 1005 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G + G GT G + +LE SNVDL E V MI QR +Q+N++ I T D++LN L+ Sbjct: 1006 GAPVTGQPGTNGLGEIAPNSLEQSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELI 1065 Query: 400 NLR 402 N++ Sbjct: 1066 NIK 1068 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 32/241 (13%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGS-KVGLGVKVAGIT 58 +SGL+ +++V+G+NIAN T + + A+F D+ AGS +VG GV + + Sbjct: 11 ISGLSTMGNSMNVLGDNIANVNTTAYNASRATFQDVLSQSVATSAGSAQVGRGVTLTTVD 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRNLVNMQGLQL 116 F G+ +T D+AI GFF + S + ++R G+F+ D NL+N G + Sbjct: 71 GLFAQGSFESTSTATDMAIGGEGFFMMRGSGSAEADMFTRAGEFRFDTQGNLINPAGHFI 130 Query: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT---------- 166 G+ I+ NI + T M +NL+S P T Sbjct: 131 QGWQVDKDSGQIEGTIGDINIGRATPPVP---TDRIDMIVNLDSRIPRETTEQRLYEAWN 187 Query: 167 ------VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPN 219 V P +A+++ +V V+DS+G AHD+++YF + T +N W+ + DP+ Sbjct: 188 GTNMTGVNPSPPIDANNFEYTTAVKVYDSKGAAHDVTIYFDRTTQENQWEFLV--TCDPS 245 Query: 220 S 220 S Sbjct: 246 S 246 >UniRef50_C0QAJ6 FlgE n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAJ6_DESAH Length = 901 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 3/146 (2%) Query: 260 LSFLN---SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 ++F+N S Q ++N V +GY GDL + DG + G YSN Q L ++ L Sbjct: 756 INFINDSLSSTQYARSSNTVYQDADGYSAGDLQGVDVASDGIMTGVYSNGQLIPLFRVGL 815 Query: 317 ANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 A F NN GL++ G N++S T+ SG A+ G GT++ +LE SNVD+S+E V MI Sbjct: 816 AKFLNNNGLSNSGGNLFSETRDSGSAITNKPGENGLGTISPNSLEMSNVDISEEFVKMIT 875 Query: 377 AQRNYQSNAQTIKTQDQILNTLVNLR 402 QR +Q+N++TI T D+++ T++N++ Sbjct: 876 TQRGFQANSKTITTVDEMMQTVINMK 901 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 24/261 (9%) Query: 8 SGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGITQ 59 SGL + V+GNNI+N T GFK G ++FAD + S +VG G+ + + Q Sbjct: 12 SGLTNMGNAMQVVGNNISNVNTVGFKKGRSTFADTLSQSVATQSGTDQVGRGMSIGAVDQ 71 Query: 60 DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQGLQLTG 118 F G+ +TG D++I +GFF + SN FY+R G F D++ LVN + + G Sbjct: 72 SFDTGSFESTGNSTDLSIGGDGFFVVRQSNSENNFYTRAGNFHFDKSGQLVNPESYLVQG 131 Query: 119 YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNA--- 175 + T + +I + + K ++T SM NL+S TV ++ ++ Sbjct: 132 WAL--DEDTGEDIGAINDIVLNAFTSSPKQSSTVSMITNLDSDAESQTVVLSNSWDSGET 189 Query: 176 ---DS--YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ-VYTQDSSDPNSIAKTATTLE 229 DS Y + V V+D+ G+ HD++VY+ K +W+ V T D S+ N +T Sbjct: 190 TYMDSTNYEYQSVVKVYDALGSTHDVTVYYDKKTGTDWEYVVTCDPSEDNRNLVEST--- 246 Query: 230 FNANGTLVDGAMANNIATGAI 250 ++ G L G ++ + ++G I Sbjct: 247 -DSKGLLARGTISFSESSGDI 266 >UniRef50_A4C6G9 Flagellar hook protein n=2 Tax=Alteromonadales RepID=A4C6G9_9GAMM Length = 492 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 91/153 (59%), Gaps = 2/153 (1%) Query: 251 NGAEP-ATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 NGA P F+++ N + Q + A I A +Q+G G L I DG + YSN Q Sbjct: 341 NGANPDQQFNINMSN-LTQFSSAFEITALSQDGQTVGRLTGISIGGDGLIEAKYSNGDAQ 399 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 + ++ LA F N +GL G+ W+ ++ SG AL G +G FG++ +G LE +NV+L+ Sbjct: 400 AISKVALARFPNEQGLTQIGNTSWTPSRESGEALAGEPDSGTFGSIRSGTLEQANVNLTG 459 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ELV++I AQRN+Q+N++ ++ +QI ++ +R Sbjct: 460 ELVDLIAAQRNFQANSRALEVNNQISQNILQIR 492 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 12/216 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F+ A+SGL AA +LDV NNIAN TYGFK A FAD+F A ++ G GV Sbjct: 1 MSFNIALSGLKAAQKDLDVTANNIANVNTYGFKESRAEFADVFSTSLFSNAKTQNGEGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNM 111 + Q F G+ T LD+AI+ NGFF DS S Y+R+G FKLD + LV Sbjct: 61 TQVVAQQFHQGSLLFTSNALDMAINGNGFFVTTDSPLSRDFTYTRSGAFKLDADNRLVTA 120 Query: 112 QGLQLTGYPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G L G P G+ ++ I IP++ + T M NL+S+ Sbjct: 121 GGDFLQGLPVNEDGSVKSVSLSTT-APIQIPDSAGSPSATGAVDMSFNLDSNAKALDPYK 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD 205 F+ + +Y S ++DS GN+ S Y+VK D Sbjct: 180 FNPLDTTTYTASTSTVIYDSLGNSRIASFYYVKVAD 215 >UniRef50_C8R2K5 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2K5_9DELT Length = 636 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 81/123 (65%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G L + + DGT+VGNYSN Q+ Q++LA+FAN GL +N + A+ S Sbjct: 514 QDGYGAGVLQNVSVKPDGTIVGNYSNGQSHDQAQVMLADFANYHGLIPGSNNTYQASAQS 573 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G ++GT G+G FG + +LE SNVDL+++ ++ + QR +Q+N+++I T D+I TL+ Sbjct: 574 GDPVIGTPGSGVFGQVLGSSLEGSNVDLARQFADLTMTQRIFQANSKSITTADEIHQTLM 633 Query: 400 NLR 402 L+ Sbjct: 634 RLK 636 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 41/226 (18%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----KVGLGVKVAGITQDF 61 +SG+N+ A N+ V+G+N+AN T +K+ +F ++ S +VG G ++ I+++F Sbjct: 11 MSGINSMAGNMAVLGDNVANINTVSYKNSQTTFQNVLTSSQDRFHEVGNGSQIQAISKNF 70 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN-------RNLV----- 109 G T + D+AI GFF + D NG Y+R+GQF L NLV Sbjct: 71 RPGPLEQTTKATDMAIGGKGFFMVNDYNGETLYTRDGQFDLKVEDYTPAGFYNLVTPAGY 130 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT--- 166 +QGL L G P I + S+P + T ++ +NL SS PT Sbjct: 131 RVQGLNLDYGNGNGQPGDILVRRD----SLP------QATENVTLALNLQSSAAPPTDTT 180 Query: 167 ---------VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT 203 TP A+ A Y+ + S+ +D QG + ++++F T Sbjct: 181 SLYESWNGAATPPLAAGA--YDYQTSIEAYDDQGQSFPLNIFFDHT 224 >UniRef50_Q1NNN7 Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NNN7_9DELT Length = 619 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 82/131 (62%) Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 A+ ++ Q+G+ G L + DGT+VG YSN+Q+ Q++LA+FA+ GL N Sbjct: 489 ASATLSQQQDGFGEGYLQDISVKPDGTMVGRYSNQQSVEQAQVMLADFADYRGLEPTSHN 548 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + AT +G +G AG G+FG + LE SNVDL +E ++I+ QR +Q+N+++I T Sbjct: 549 AYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLIMTQRIFQANSKSITTA 608 Query: 392 DQILNTLVNLR 402 D++ +TL+ L+ Sbjct: 609 DEVFDTLMRLK 619 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 27/227 (11%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----KVGLGVKVAGITQDF 61 VSGLN+ + N+ V+G+NIAN T +KS ASF ++ S ++G G +VA IT++F Sbjct: 11 VSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNGSQVAAITKNF 70 Query: 62 TDGTTTNTGRGLDVAISQNGFFR----LVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 G T + D+AIS GFF L D + Y+R+GQFKL+ ++ + +G Sbjct: 71 RPGDLETTNQSTDMAISGKGFFMVNNPLAD---EMLYTRDGQFKLE--KSAITPEGFYNL 125 Query: 118 GYPA----TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 PA G GA+ + + + T S+ +NL S P S Sbjct: 126 ATPAGHLVQGRNLAANGGADNLGDILIQEVSDPRATGNVSLAMNLQSKPGREDAQPLHTS 185 Query: 174 ---------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY 211 AD Y+ + + FD QG D++VYF +T +N + + Sbjct: 186 WNGAAAEPLAADRYDYRTIIQAFDDQGRQFDLTVYFDQTERDNQREF 232 >UniRef50_C8QYQ3 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYQ3_9DELT Length = 806 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 75/123 (60%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 QNG+ G L S ++ G + GN+SN Q + ++ LA+FAN +GL G N++ AT S Sbjct: 683 QNGFAAGFLQSVSVDTAGIITGNFSNGQVLMQAKVALADFANLQGLHKVGGNIFRATTQS 742 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G + G GT G + +LE SNVDL E V MI QR +Q+N++ I T D++LN L+ Sbjct: 743 GAPVTGEPGTNGLGEIAPNSLEMSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELI 802 Query: 400 NLR 402 N++ Sbjct: 803 NIK 805 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 33/247 (13%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVKVAGIT 58 +SGL+ + V+G+NIAN T F S ++F D+ + S +VG GV + + Sbjct: 11 ISGLSTMGNGMSVLGDNIANVNTVAFNSSRSTFQDVLSQSVSTAAGTAQVGRGVTLTTVD 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLV--DSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 F G+ +T D+AI GFF L DS + ++R G+F+ D++ L + G + Sbjct: 71 GLFAQGSFESTSTPTDMAIGGEGFFMLRGGDSAEADMFTRAGEFRFDQHGFLTSPGGHFV 130 Query: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL-----NSSDPLPTVTPFS 171 G+ ++ + +I + M T + QI+L D T + Sbjct: 131 QGW-------SVDKNTGQIEGTIGDIRMDRSTPPVQTEQIDLIVNLDARVDQASASTLYD 183 Query: 172 ASN--------ADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSIA 222 + N A +Y S+ V+DS+G A D+++YF +T +N W+ +SDP + Sbjct: 184 SWNGTADDPIAATNYQYTTSLKVYDSKGVARDVTIYFDRTAKENEWEFLV--TSDPAADR 241 Query: 223 KTATTLE 229 + + E Sbjct: 242 RELSEAE 248 >UniRef50_A1SEP1 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A1SEP1_NOCSJ Length = 282 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 1/133 (0%) Query: 271 GANNIVATTQNGYKPG-DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 G +IV NG P L SY++ DG + + + ++ Q+ LANF N GLA G Sbjct: 149 GLTDIVLPEDNGATPPLALSSYELGRDGKLTATFEDGSKLVVAQVALANFNNPMGLARAG 208 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 + ++ T +SGVA LG +G G+ G L+ G++E SNVDL+ E N+I+AQR +Q++++ I Sbjct: 209 ETSFTTTANSGVAELGVSGEGSRGALSPGSVEMSNVDLAAEFTNLILAQRGFQASSRVIT 268 Query: 390 TQDQILNTLVNLR 402 T DQ+L LVN++ Sbjct: 269 TSDQVLEDLVNIK 281 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 18/130 (13%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 +SGL T LDV GNNIAN+ T GFKS + F D + +VG Sbjct: 9 ISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLGGTNPIQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 LGV+VA + G TGR D+ I+ +G F ++ N + Y+R G F D + LV Sbjct: 69 LGVQVAATNTNLNQGANQTTGRPTDLMINGDGMFVVMRGNVAT-YTRAGAFSWDNSGTLV 127 Query: 110 NMQGLQLTGY 119 + G ++ GY Sbjct: 128 SPGGGRVQGY 137 >UniRef50_D2R533 Flagellar basal body FlaE domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R533_9PLAN Length = 815 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 90/153 (58%) Query: 250 INGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 I ++P F + F +T +++ A+ Q+G G L SY I +DG + G +SN ++ Sbjct: 662 IPSSDPLEFRIDFSQVSGLSTETSSLAASRQDGSSAGTLTSYIIGEDGVIRGVFSNGVSR 721 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 LGQ+ LA FAN GL G N+++ +SG+ + G G G++ +GA+E SN D+ K Sbjct: 722 DLGQVRLARFANPAGLEQRGQNLFAQGVNSGLPVEGNPGNDGMGSIISGAVELSNTDIGK 781 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L+++++A Y+ NA+ I ++L+ L+NLR Sbjct: 782 NLIDLVLATTQYRGNARVITAAQELLDELLNLR 814 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 17/135 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 A + A++G+ AA T +DV+GNN+ANS T GFK+ + FA F ++ Sbjct: 6 ALTTALTGMTAAETQIDVVGNNLANSQTVGFKASDSVFATQFLQTQSLGSGPTSGSGGTN 65 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 GLG +VA IT DFT GT + D+AI GFF + DS G Y+RNGQFK + Sbjct: 66 PRQTGLGTRVAEITPDFTQGTIEVSSNPSDLAIQGEGFFIVQDSQGEQVYTRNGQFKTNS 125 Query: 105 NRNLVNMQGLQLTGY 119 + LV G ++ G+ Sbjct: 126 DNELVTTTGQRVLGF 140 >UniRef50_A8RWD3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RWD3_9CLOT Length = 550 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 98/191 (51%), Gaps = 37/191 (19%) Query: 10 LNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----------------GSKVGLGV 52 + A T LDVIGNNIAN TYGFKS A F D++ S+VG G Sbjct: 1 MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATGGDNNKGGTNASQVGYGA 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR-NLVNM 111 ++AG+ + +TGR +DVAI+ GFF+++DS+G++FY+R G +LD N NLV+ Sbjct: 61 QLAGVDLNMGRSALQSTGRPMDVAITGEGFFQVMDSDGNIFYTRAGNLQLDNNSGNLVDA 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPN-----------------TLMAAKTTTTASM 154 G + G TG P GA+ ++SIP T+ + TT+ A++ Sbjct: 121 NGYTVLG--VTGDPLGKAAGADKIHLSIPGKNNAQSANSQTINGIEYTITSQNTTSAANV 178 Query: 155 QINLNSSDPLP 165 I+ D LP Sbjct: 179 TISFRLDDTLP 189 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 4/129 (3%) Query: 278 TTQNGYKPGDL----VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 T NG + GD+ V I +G + + + +G+I L F N GL G++ + Sbjct: 421 TLTNGSEGGDVALSGVGVTILSNGIIEATHPDLGKIQIGRIDLVTFDNPYGLEGVGNSYF 480 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 T +SG L AG G L +LE SNVD+S E +MIV QR +Q+N++ I D Sbjct: 481 KTTANSGDPKLCQAGENGTGALKTSSLEMSNVDISTEFADMIVTQRGFQANSRIITVSDS 540 Query: 394 ILNTLVNLR 402 IL LVNL+ Sbjct: 541 ILEELVNLK 549 >UniRef50_A3UFN4 Flagellar hook protein n=2 Tax=Hyphomonadaceae RepID=A3UFN4_9RHOB Length = 465 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 128/475 (26%), Positives = 215/475 (45%), Gaps = 90/475 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + SGL A ++ L I +NIAN T G+K F + K+G G G T+ Sbjct: 6 AMAAGASGLIANSSALAAISDNIANVNTVGYKRVDTIFTPNY---KIGGG----GETRYA 58 Query: 62 TDGTTTNT-----GRGL--------DVAISQNGFFRLVDS------NGSVFYSRNGQFKL 102 + G ++N+ GL D+AI +GFF + S + +V ++R+G F+ Sbjct: 59 SSGVSSNSRLDVNSSGLLTPGVSATDMAIDGDGFFVVRPSPTAGGSSDAVLFTRSGGFQT 118 Query: 103 DENRNLVNMQGLQLTGYP--ATGTPPTIQQGANPTNISIPNTLMAAKTT-------TTAS 153 D + L N G+ L +P A GT + Q NP+N+ +TL A + T+S Sbjct: 119 DSSGYLRNDAGMYLYAWPVQADGT---VNQ--NPSNV---DTLEAVNLSNIGGTANATSS 170 Query: 154 MQINLN------------SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV 201 ++IN N + DP + T AS + + + ++ ++D+QG +++ F+ Sbjct: 171 VRINANLQASTTPSAAAATYDPTASGTNM-ASGTVTPDFERTIQIYDTQGGVRSVTMSFL 229 Query: 202 K--TGDNNWQV--YTQDSSD-----PNSIAKTAT-TLEFNANGTLVDGA----------- 240 K T N W V + Q +SD P + AT + F+ NG +V GA Sbjct: 230 KHATNANQWHVELHVQPASDVTTGAPLIDGQIATGIVAFDTNGEIVPGAPTTLPTSLPFE 289 Query: 241 --------MANNIATGAINGAEPATFSLSFLNS-----MQQNTGANNIVATTQNGYKPGD 287 A + A G T SL + + Q +N+ +T +G G Sbjct: 290 ASDAAGAVGAGAVRWAASTGVGAQTISLDLGTAGTPGGITQFNSPSNLDSTVVDGAIFGA 349 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 +++DDG + ++N + + Q+ +A N GLAS G + T+ SG L Sbjct: 350 FAGVEVSDDGFLSARFTNGVVRRVYQLPVATVFNPNGLASVGGASFQITEDSGAFTLNAP 409 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G+G GT+ +E SNVD++ E N+I+ QR Y ++++ I T D++L + ++ Sbjct: 410 GSGASGTIAAKTVENSNVDIATEFSNLIITQRAYSASSRIITTADEMLAEAIQMK 464 >UniRef50_A3SFR5 Putative flagellar hook protein n=2 Tax=Sulfitobacter RepID=A3SFR5_9RHOB Length = 433 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 125/445 (28%), Positives = 195/445 (43%), Gaps = 62/445 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A + + I NIANS T G++ G A A G GV ++ Sbjct: 6 ALQTGVSGLRANSKAVGSISENIANSNTVGYRRGFAHMVTTTASGGNGDGVLSVNAVEEL 65 Query: 62 ---TDGTTTNTGRGLDVAISQNGFFRL-VDSNGSV----FYSRNGQFKLDENRNLVNMQG 113 T G +T D+AI NGFF + ++ N +V +R G F DE NL N G Sbjct: 66 DIATAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLKNAAG 125 Query: 114 LQLTGYP--ATGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNS-----SDP- 163 L GYP G ++ + + + ++I N ++A T+T + NL S +DP Sbjct: 126 YYLAGYPYGLEGDIGSVDRTSFKDMETVNIGNLNISAGVTSTITAFGNLPSQDTGQADPG 185 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPNSIA 222 P VT S VF + G + +S + T N W + +D N Sbjct: 186 APFVT--------------SSEVFTALGESQRVSFSWAPGTTANTWDLAI---ADQNGNG 228 Query: 223 KTATTLEFNANGTLVDGAMA-NNI--------------ATGAI-----NGAEPATFSLSF 262 + T+EFN G ++ +NI ATG NG P ++ Sbjct: 229 LGSVTIEFNNAGPAAGSPLSYSNINSTATAPAAFTVDPATGVATITLDNGVVPQEIDITL 288 Query: 263 -----LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 + + Q G ++ A ++G G+LV +I +DGT+ G + N + L I +A Sbjct: 289 GKPGAFDGISQFAGDFSL-AFDRDGSSAGELVRTEITEDGTLFGVFDNGMRRALYDIPVA 347 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 AN GL N + + +G A + G++ GALE SNVD+++E+ ++I A Sbjct: 348 VVANPNGLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKA 407 Query: 378 QRNYQSNAQTIKTQDQILNTLVNLR 402 QR + +NA+ I T D +++ L+ Sbjct: 408 QRAFSTNAKVITTVDDMMDETTRLK 432 >UniRef50_Q1NGN5 Flagellar basal-body rod protein FlgG n=2 Tax=Sphingomonadaceae RepID=Q1NGN5_9SPHN Length = 281 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 14/156 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV-------GLGVK 53 M+F ++SGL A +L I NN+AN + FK A F D+FA S + G GV+ Sbjct: 1 MSFYVSLSGLKGAQADLSAISNNVANVNSTAFKKSKAQFGDIFAASPMQTTHQVAGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V GITQ FT GT T + LD+AI+ GFF + +G++ Y+RNG F +D +R V+ G Sbjct: 61 VQGITQQFTQGTIETTDKTLDLAITGEGFFTVKGEDGTISYTRNGAFSVDNDRFAVDTTG 120 Query: 114 LQLTGY---PATG---TPPTIQQG-ANPTNISIPNT 142 ++ + P TG TPPT G + T++ IP T Sbjct: 121 SRIQVFAVDPETGDLTTPPTSATGPGDLTDLQIPTT 156 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 83/128 (64%), Gaps = 1/128 (0%) Query: 276 VATTQNGYKPG-DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 + TT N G L S ++ +G V Y++ T LGQ+ +A+F + EGL +GD W+ Sbjct: 153 IPTTYNNEADGAQLTSVGVSKEGLVSAIYADGSTVYLGQVAMASFNSLEGLRQQGDAHWT 212 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 +T SG +LGTA G FG++ +G+LE SNVD++ ELV +I AQRN+Q+N++ I+ + + Sbjct: 213 STVESGNPILGTANQGMFGSVNSGSLERSNVDITDELVQLIAAQRNFQANSKAIEAANTL 272 Query: 395 LNTLVNLR 402 T+VN+R Sbjct: 273 TTTIVNIR 280 >UniRef50_B4U878 Putative uncharacterized protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U878_HYDS0 Length = 583 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 108/223 (48%), Gaps = 18/223 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----------- 50 +F A+SGL+A L +I NN++N+ T G+K+ F ++ A VG+ Sbjct: 4 SFYNAISGLDAFNNYLSIISNNMSNADTIGYKAVNPIFENVVANVNVGINTLTDTLKSTI 63 Query: 51 ---GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN--GSVFYSRNGQFKLDEN 105 GV V ++ G TG D+AI NG F L D G+VFY+RNGQF + + Sbjct: 64 YGAGVIVDSTQLNWQLGNFEQTGNNTDLAIQGNGLFILQDPANAGNVFYTRNGQFTISQQ 123 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 +VN GL+L GY + + P I IP A T NLNS+ P Sbjct: 124 GYMVNPDGLKLLGYKVDQSGSVVGTSLQPIYI-IPQQPPKATDLITYQQPTNLNSTAPSI 182 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNW 208 T F+ N ++N + ++T FD+ GNA + YF KTG N W Sbjct: 183 T-QAFNPLNTATFNYQNTLTTFDTLGNAIEGDTYFQKTGPNTW 224 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 95/160 (59%), Gaps = 8/160 (5%) Query: 245 IATGAINGAEPATFSLSFL--NSMQQNTGANNIVATTQNGYKPGDLVS-YQINDDGTVVG 301 +A G + GA+P T + + + NS ++ + +Q+GY G+LV+ Y ++ DGTVVG Sbjct: 426 LAFGQLIGAKPTTSTSAGIIDNSYITQDASDFTITASQDGYSLGNLVNVYVLSSDGTVVG 485 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 YSN Q+ L ++ LA F + L +G N++++ + + L G+A + +G LE Sbjct: 486 VYSNGQSTPLYRVALAQFQDPNELIEKGSNLYTSIYTPTILLPGSADI-----IQSGMLE 540 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 SNVD+++ + ++ A+R+YQ+NA+ + + D +L +N+ Sbjct: 541 QSNVDIAQAYIQLVTAERSYQANAKVVTSSDNVLQATLNM 580 >UniRef50_Q2RRB3 Putative uncharacterized protein n=2 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRB3_RHORT Length = 472 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 132/460 (28%), Positives = 201/460 (43%), Gaps = 74/460 (16%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-----VGLGVKVAGITQD 60 AVS +NA ++++ I NN+ANS+T G+K+ ASF + G+ G GV VA TQ+ Sbjct: 23 AVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGV-VASATQN 81 Query: 61 FTD-GTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQGLQLT 117 + G T D+A+ G F + D +GS ++Y+R G F + + +LVN L Sbjct: 82 VINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNNYYLQ 141 Query: 118 GYPA--TGTPP--TIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 GYP G P T GA+ I++ AAK T+ S+Q V P A+ Sbjct: 142 GYPTDRNGVPLTNTGNSGASLETINLAGATGAAKATSEMSIQ----------AVLPAQAT 191 Query: 174 NADS--------YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD---SSD----- 217 DS Y V ++DS G AH M+V + K D W + D SSD Sbjct: 192 AGDSTAVPPVAAYTSSSDVEIYDSLGVAHTMTVKWTKMSDTKWTMTLYDPKLSSDMTGDA 251 Query: 218 --------------------PNSIAKTATTLEFNANGTL-VDGAMANNIATGAINGAEPA 256 P + A +EF G L +A I A NG A Sbjct: 252 TGAISSTTTGVTDVPANAGPPATSHGIAVDVEFTDQGLLKTPSVLALKITPDASNGTGAA 311 Query: 257 TFSL--------------SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 + ++ N A ++ Q+G G S I+ G V N Sbjct: 312 ISEIALNLGTAGKANGLSTYSNEDSDGKPAVDLKKVVQDGVTYGTYYSNTISKAGLVYAN 371 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 ++N + + Q+ LA F+N GL + +SAT SG TAGTG G +++G++E+ Sbjct: 372 FTNGISYPIYQVPLAMFSNVNGLEAVSGTAYSATVKSGTPTYVTAGTGGSGGVSSGSVES 431 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 S VD + E +IV+Q+ Y + Q I + ++ L++ + Sbjct: 432 STVDTAAEFSKLIVSQQAYSAATQIISSNQEMFQNLISAK 471 >UniRef50_B8J087 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J087_DESDA Length = 808 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 80/134 (59%) Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 NT + + TQ+GY G L + I++ G V G YSN +T L QI L +F N++GL E Sbjct: 674 NTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIALYDFQNHQGLYRE 733 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G N++SAT SG LG AG FG +E SNVD++ E V MI QR +Q+N++ I Sbjct: 734 GGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMISTQRGFQANSKGI 793 Query: 389 KTQDQILNTLVNLR 402 T D +L T++ ++ Sbjct: 794 TTVDTMLETVIGMK 807 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 43/238 (18%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFAD-MFAG-------SKVGLGVKVAGI 57 +VSGL + ++V+GNNIAN +T GFKS F D ++ G S++G G V I Sbjct: 10 SVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGASVYAI 69 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQGLQL 116 DF+ G+ +T D+AI NGFF++ N ++Y+R G F +++R L N +G L Sbjct: 70 LGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPEGYLL 129 Query: 117 TGYPATGTPP-TIQQGA-----------------NPTNISIPNTLMAAKTTTTASMQINL 158 G+ T GA PT+I + + + + TT + + L Sbjct: 130 QGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQTTNVTFTMGL 189 Query: 159 --------NSSDPLPTVTPFSASNADS--------YNKKGSVTVFDSQGNAHDMSVYF 200 +S+ P F +A S Y + S+ V+D G H ++VY+ Sbjct: 190 TNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGTHTLTVYY 247 >UniRef50_C0GT28 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT28_9DELT Length = 755 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 80/123 (65%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G L + +I+ +G + G Y N Q L + LA+F N +GL EG N++S T+SS Sbjct: 632 QDGYTTGFLQNIEIDRNGVLTGRYDNGQVMDLYALTLADFHNEQGLRKEGGNLFSETRSS 691 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G A+ G AGT G +++ +LE SNVDL+ E V +I ++ +Q+N++TI+T D +L ++ Sbjct: 692 GPAMTGLAGTRGLGEISSNSLEMSNVDLATEFVKLIQTEKGFQANSKTIQTTDTMLGIIM 751 Query: 400 NLR 402 ++ Sbjct: 752 QMK 754 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 77/181 (42%), Gaps = 30/181 (16%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVKVAGI 57 VSGL + IGNNI+N +T GFK F D + +VG GV V + Sbjct: 10 GVSGLKGHGEKMGTIGNNISNVSTVGFKGSRMHFEDFMSQDINTGAGVGQVGRGVGVGAV 69 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFF----RLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 DF+ G+ +T DVAI +GFF R D N Y+R G F+ DE LV+ Sbjct: 70 MNDFSQGSLESTNEATDVAIGGDGFFQVSARGTDEN---LYTRAGNFRFDEEGYLVDPNN 126 Query: 114 LQLTGYPATGTPPTIQ--------------QGANPTNISIPNTLMAAKTTTTASMQINLN 159 + G+ PP + QGA P +I + + + T +NL+ Sbjct: 127 NVVQGWEVREDPPGVADDDEIIQTETGVEIQGA-PGDIRLDDFQSPPEQTRKVDKMVNLD 185 Query: 160 S 160 S Sbjct: 186 S 186 >UniRef50_B9KEI8 Flagellar hook protein FlgE n=1 Tax=Campylobacter lari RM2100 RepID=B9KEI8_CAMLR Length = 814 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 47/270 (17%) Query: 170 FSASNADSYNKK-------GSVTVFDSQGNAHDMSVYFVKT-----GDNNWQV------- 210 F+A N + Y++ S+ +FDS G H+++V F K G W + Sbjct: 554 FNAGNNEKYSQDMYLSAHTASIEIFDSLGTRHELTVQFTKQSKTADGGAEWSIIISVPEP 613 Query: 211 ----YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEP-ATFSLSF--- 262 ++ D + N + L F +G+L N + NG++P L F Sbjct: 614 AEINFSGDGAPGNIVVGN---LRFGNDGSL-QSYTPNVLNFTGNNGSKPDQVIKLDFGTT 669 Query: 263 -----LNSMQQNTGANNIVATTQ---NGYKPGDLV--SYQINDDGTVVGNYSNEQTQLLG 312 L S +++ ATT+ +GY G+L + + +++G + G ++N +T L Sbjct: 670 GGFDGLTSYDKDS------ATTKQETDGYTGGNLKPDALRTDENGYIYGEFTNGKTLALA 723 Query: 313 QIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELV 372 ++ LA F NN GL G+N++ AT +SG A +G AG G G L A+E SNVDLS+ L Sbjct: 724 KVALATFPNNMGLEEMGNNLYKATANSGTATIGHAGEGGRGGLKGSAIEMSNVDLSRALT 783 Query: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +IV QR YQ+N++TI T DQ+LNTL+ L+ Sbjct: 784 ELIVIQRGYQANSKTITTSDQLLNTLLQLK 813 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 23/211 (10%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVG 49 VSGL A +DV GNNIAN T+GFK A F+ + + + +VG Sbjct: 9 VSGLQAHQYAMDVEGNNIANVNTFGFKYSRADFSTLMSQTSKIATAPDGNLGGKNPMQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNL 108 LG V T+ + G T + D+AI+ +GFF + + G+ F++R G FK D N Sbjct: 69 LGAGVNSTTRIHSQGNIQTTDKNTDMAINGDGFFIVSNDGGTTQFFTRAGDFKTDAVGNF 128 Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDPLPT- 166 V+ G + G+ I + T+I IP + M A+ +++ S+ NL+S + L T Sbjct: 129 VDNNGYTVQGWNYNQETGQIDSSKSVTDIVIPPGMSMPARPSSSVSLTANLDSGNTLGTN 188 Query: 167 ---VTPFSASNADSYNKKGSVTVFDSQGNAH 194 P A ++ +K + T D H Sbjct: 189 ASAKRPIYALDSLHGGRKDTGTTIDENDTGH 219 >UniRef50_Q72C41 Flagellar hook protein FlgE n=3 Tax=Desulfovibrio vulgaris RepID=Q72C41_DESVH Length = 564 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 76/123 (61%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G L + ++ DG + G YSN T L Q+ L +F + + L EG N++S T+ S Sbjct: 441 QDGYTFGFLQNITVDRDGIMQGKYSNGVTLDLYQVTLVDFTSKQNLRREGGNLFSGTRDS 500 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G L G A + G +++ +LE SNVDL++E V MI QR +QSN++ I T D +L +V Sbjct: 501 GDPLPGPANSNGLGAISSNSLEQSNVDLAREFVEMITTQRGFQSNSKVITTTDTMLEVVV 560 Query: 400 NLR 402 N++ Sbjct: 561 NMK 563 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 86/303 (28%), Positives = 124/303 (40%), Gaps = 74/303 (24%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AG-SKVGLGVKVAGIT 58 VSGL A ++V+GNNIAN T GFK F D AG ++VG GV + I Sbjct: 11 VSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQVGRGVSIGAIF 70 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQGLQL 116 D++ G T D+AI GFF V G+ +Y+R G F+ D + LV+ G L Sbjct: 71 GDYSQGAFQTTNESTDLAIQGRGFFS-VKPKGTEDTYYTRAGNFRFDADGYLVDPHGYVL 129 Query: 117 TGYP--------------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-- 160 G+ AT T I+ P +I + + T ++ +NL+S Sbjct: 130 QGWAIERSQNSLTSSAVTATSTTSKIKGSGVPVDIKLDGFTAEPQHTQNITLNVNLDSNP 189 Query: 161 ---------------------SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVY 199 +PL P A +A +Y + ++ V+D G AH ++VY Sbjct: 190 GNDKSSSTTNPYFSLFETWNGQNPLTGTQPALAQSAFAY--QSTIKVYDEAGTAHTLTVY 247 Query: 200 FVKT----------GDNNWQ-VYTQD-SSDPNSIAKTAT------------TLEFNANGT 235 F + G W+ + T D + D IA TA TL F+ G Sbjct: 248 FDQVDPDSVTNEPNGRKQWEYIVTMDPAEDKRVIAGTAMNTTRAAGLLMTGTLTFDTTGQ 307 Query: 236 LVD 238 LVD Sbjct: 308 LVD 310 >UniRef50_B8CYN8 Flagellar basal-body rod protein FlgG n=2 Tax=Bacteria RepID=B8CYN8_HALOH Length = 262 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 283 YKPGDLVSYQINDDGTV-VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 Y P D S I DGT+ V + Q Q +GQI LA F+N GL S G N++ T +SG Sbjct: 141 YIPEDASSISITSDGTIAVEINGSNQPQQIGQIELARFSNPAGLNSIGRNLFKPTVASGD 200 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++GT G+ FGT+ G LE SNV + +E+VNMI AQR Y+ N++ I+ D++L T L Sbjct: 201 PIVGTPGSPGFGTIAQGFLEMSNVKVVEEMVNMIAAQRAYEINSKAIQAADEMLRTASQL 260 Query: 402 R 402 R Sbjct: 261 R 261 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 26/156 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------------------ 43 A A +G++A TN+D I NN+AN T GFK +F D+ Sbjct: 4 ALWTAATGMDAQQTNIDTISNNLANVNTTGFKKTRVNFQDLMYQHIRQPGTPNSQGGQIP 63 Query: 44 AGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 G +VG GVKV+ + F+ G NT LD+ I +GF +++ +G++ Y+R+G K D Sbjct: 64 VGIEVGHGVKVSATQKIFSPGNIQNTDNPLDILIEGDGFLQVLLPDGTLAYTRDGSLKRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI 139 +V GYP P I + ++ISI Sbjct: 124 SMGRIVTSD-----GYPIQ---PEIYIPEDASSISI 151 >UniRef50_B6BH25 Conserved domain protein n=2 Tax=Campylobacterales RepID=B6BH25_9PROT Length = 419 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 107/442 (24%), Positives = 183/442 (41%), Gaps = 71/442 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA------------GSKVG 49 AF +SGL + +++I +N+AN +T GF+ FA MF S +G Sbjct: 5 AFYTGISGLKSNQGGINIITDNLANISTVGFRGYNTEFASMFEDNLNTTSKNSATSSTIG 64 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 GVK+ T + G + + D+AI NG+F + Y+R G F D + +L+ Sbjct: 65 AGVKLQAATMNRDQGVIQISDKSTDLAIVGNGWFG-IQGEKDTMYTRGGNFTFDRDSDLI 123 Query: 110 NMQGLQLTGYPA--------TGTPPTIQQG--ANPTNISIPNTL-MAAKTTTTASMQINL 158 G + G TG ++ G + + P TL + +TTA N+ Sbjct: 124 TQDGFYVLGTMGANIQDDVLTGILDEVKLGDVKSQEKLRFPQTLTYPSVASTTAKFLGNI 183 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-----GDNNWQV-YT 212 + D T+ V D N + + + F K + W V T Sbjct: 184 GTDDEARTI---------------GAGVIDGLNNRNHLRLSFTKVVPQVLPGSQWDVTAT 228 Query: 213 QDSSDPNSIAKTATT-LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 + D +I T T F++ G L+ + T N P L +G Sbjct: 229 TQTLDGTTIYDTQTGGASFDSRGALISTTL-----TSIDNNGSPVAIDLG--------SG 275 Query: 272 ANNIVATTQ---------NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 + +VA + +G + GDL Y +N + V+ ++N +G+I + +F N Sbjct: 276 FDGVVAISNIPISASSLADGTQGGDLEGYSVNKNAEVIATFTNGLQSSVGKIAVYHFRNE 335 Query: 323 EGLASEGDNVWSATQSSGVALL--GTAGTGNFGT-LTNGALEASNVDLSKELVNMIVAQR 379 +GL + ++SG L ++G GT + N LE SNV ++ L ++I+ QR Sbjct: 336 QGLDRASGARFFEGKNSGSPLFYQDSSGENIIGTDILNFHLEGSNVQMTTGLTDLIIFQR 395 Query: 380 NYQSNAQTIKTQDQILNTLVNL 401 Y +N+++I T DQ++ + + Sbjct: 396 AYDANSKSITTADQMMQKALQM 417 >UniRef50_UPI00016999D0 flagellar hook protein FlgE n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016999D0 Length = 188 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 18/193 (9%) Query: 196 MSVYFVKTGDNNWQVYTQ-DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAI---- 250 M++++ K DN W +T D ++ A + F++NG L GA ++ +G + Sbjct: 1 MNIFYRKVADNQWNAFTYVDGNNVTVGGNAAADIRFSSNGALSTGA--GDVTSGGLVPLD 58 Query: 251 -----NGAEPAT-FSLSFLNSMQ--QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 GA P + + +++N+ Q + N++ TQ+G+ G L ++ +G V Sbjct: 59 TFTPSGGAAPISGLNFNYVNTTQFGSSFAVNDL---TQDGFTSGRLSGVDVDSEGVVFAR 115 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 ++N ++ LG++ +A F NN+GL GD W + +SG LG AGT +FG + +GALE Sbjct: 116 FTNGRSVGLGKVAMARFNNNQGLRQVGDTRWVESFASGDVQLGEAGTSSFGLMQSGALEN 175 Query: 363 SNVDLSKELVNMI 375 SNVDL+++LVN+I Sbjct: 176 SNVDLAEQLVNLI 188 >UniRef50_A1VXC8 Flagellar hook protein n=16 Tax=Campylobacter RepID=A1VXC8_CAMJJ Length = 545 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 2/134 (1%) Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 G V T Q+G G Y I+DDG++V +SN + ++G++ L NF N +GL + GD Sbjct: 411 GVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGD 470 Query: 331 NVWSATQSSGVA--LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 N+++AT +SG A ++ N G LE SNVDLS EL N+IV Q+ + +++++I Sbjct: 471 NIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSI 530 Query: 389 KTQDQILNTLVNLR 402 T DQ++ +N++ Sbjct: 531 TTSDQMIQKAINMK 544 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA---------GSKVGLGV 52 +F +SG+ + + +D+ NNIAN T GFK A F D+F ++ G G Sbjct: 4 SFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGYGS 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 A F G+ + DVA+ GFF ++ ++G+ +Y+RNG F+ D N LV+ Sbjct: 64 GAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVDSY 123 Query: 113 G 113 G Sbjct: 124 G 124 >UniRef50_B9K8L8 Flagellar basal-body rod protein FlgG n=106 Tax=Bacteria RepID=B9K8L8_THENN Length = 268 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 49/118 (41%), Positives = 70/118 (59%) Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 P + VS ++ DG V + Q LG I L F N GL S GDN++ AT +SG + Sbjct: 150 PENAVSINVSPDGIVSAELQDGTIQQLGTITLVRFVNPSGLKSIGDNLYIATPASGDPIE 209 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G FG + G LE SNVD+ +E+V+MI AQR Y+ N++ I+T D++L T N++ Sbjct: 210 GVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYEFNSRVIQTADEMLRTATNVK 267 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 25/165 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------------- 43 ++ A +G++A LD I NN+AN T G+K A F D+ Sbjct: 10 ISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATSTL 69 Query: 44 -AGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 G VG GV+ A T+ FT G TG LD+AI+ +GFF++ +G + Y+R+G FK+ Sbjct: 70 PTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSFKV 129 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAK 147 D +V GL L P TI + A N+S P+ +++A+ Sbjct: 130 DSEGRIVTSNGLLLV--PEI----TIPENAVSINVS-PDGIVSAE 167 >UniRef50_A6CER6 Flagellar hook protein FlgE n=2 Tax=Planctomyces RepID=A6CER6_9PLAN Length = 563 Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 14/244 (5%) Query: 169 PFSASNADSYNKKGSVT---VFDSQGNAHDM---SVYFVKTGDNNWQVYTQDSSDPNS-- 220 PF+ S S N + ++T +FDS G M SV ++ +N Y +S+D N Sbjct: 321 PFTKSQ--SSNGESAITDFVIFDSLGEPVTMKMTSVLESQSSNNTVFRYFLESADDNDGD 378 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAINGAEP---ATFSLSFLNSMQQNTGANNIVA 277 IA + T+ F++NG + + N +N A T LS ++ + + + + Sbjct: 379 IAVSNGTITFDSNGNVTN-YTPNTFGISRVNTAADEMDVTLDLSDISGISSASAGSTLKL 437 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 T Q+G PG L S+ I++ G + G + N + LGQI L+ F+N +GL G++ + Sbjct: 438 TLQDGSDPGTLASFVIDETGIINGVFDNGIIRTLGQITLSRFSNPQGLLEFGNSTFQEGV 497 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SSG L T G GT+ G++E SN D+ + LV++IVA NY+ NA+ I + Q+++ Sbjct: 498 SSGPPFLVTPGNFGAGTIRAGSIELSNTDVGRSLVDLIVASTNYRGNARVISSVQQLVDE 557 Query: 398 LVNL 401 L+ L Sbjct: 558 LLVL 561 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 18/135 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSK--------- 47 A + ++ GL+ T++DV+GNNIAN+ T GFK+ F + GS+ Sbjct: 6 ALNTSLGGLSLNETSIDVLGNNIANAGTNGFKASNVLFTTQLSRTLSVGSRPTTSNGGTN 65 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 VGLG A I +DFT G+ TN+ D+AI +GFF L +G V YSRNG F+L+ Sbjct: 66 PRQVGLGALSASIRKDFTQGSVTNSTSPSDLAIQGDGFFILDGPDGQV-YSRNGNFELNS 124 Query: 105 NRNLVNMQGLQLTGY 119 L N G ++ GY Sbjct: 125 QSLLTNQSGFKVQGY 139 >UniRef50_O67711 Flagellar hook protein flgE n=2 Tax=Aquificaceae RepID=FLGE_AQUAE Length = 482 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 27/232 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----------- 50 +F A++G++ + LDV +N+AN+ T GFK F DM + VGL Sbjct: 4 SFYNAITGMDVSRFALDVTSDNLANANTVGFKKSRPIFQDMVSQVVVGLNTTTGTVKTTT 63 Query: 51 ---GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENR 106 G V + +T G+ T D+AI F L D +Y+R+G+F+++ Sbjct: 64 FGAGAVVDSTQKVWTIGSFKQTEITTDLAIEGKALFILRDVLTNQTYYTRDGRFRINREG 123 Query: 107 NLVNMQGLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASM--QINLNSS 161 L+N GL + G+ P TG G +I + T + K T NL+ Sbjct: 124 YLINPNGLYVQGFKVNPVTGE----VTGTQLEDIRV-ETQIPPKATGEIYFNPPTNLDER 178 Query: 162 DPL--PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY 211 P+ T TPF+ ++ +YN + ++T++DS G +YFVKTG N W+VY Sbjct: 179 APIIDQTTTPFNPLDSFTYNYRYTLTIYDSLGREVPADIYFVKTGTNQWKVY 230 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 6/120 (5%) Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVS-YQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 NS A+ +V Q+GY G+L+ Y +++DG VVG YSN +T ++ LA F + Sbjct: 363 NSYITQHAADFVVTMDQDGYARGELIDLYVLSEDGVVVGVYSNGETLPTYRLALAQFTDP 422 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 E L +G N++++ ++ + L G + + + +E SNVD++KE +N+I AQR YQ Sbjct: 423 EELVKKGSNLYASVKTPTILLPGGS-----NKIRSAVVEMSNVDIAKEFINLITAQRTYQ 477 >UniRef50_A3WGT9 Flagellar hook protein n=2 Tax=Erythrobacter RepID=A3WGT9_9SPHN Length = 279 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 18/182 (9%) Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG- 286 LE A+GTL D A + I ++GA T N A+ + T++ PG Sbjct: 108 LEIVASGTLQD-AFGDRIQGFPVDGAGTPT----------SNVPADITIPTSRTVTDPGT 156 Query: 287 ------DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 L S + G + YS+ ++ + + LA F N GL S G W AT SG Sbjct: 157 GATQDFQLTSVGFDARGVLTATYSDGFSEPVAMLSLATFPANGGLRSIGQTKWEATAESG 216 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G G GNFG + G LE SNVDL++E+V+++ AQRN+Q+NA+ I T I T++N Sbjct: 217 DPEFGQPGVGNFGAIATGTLERSNVDLAEEMVSLLTAQRNFQANARAIDTATAITQTVLN 276 Query: 401 LR 402 L+ Sbjct: 277 LQ 278 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 40/239 (16%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-------SKVGLGVK 53 M+F ++SG+ A T+L VI NNIAN+ T GFK +A F+D+ A + G+G Sbjct: 1 MSFFTSLSGMRNAETDLRVISNNIANAETAGFKKSSAQFSDLVASGGSTDPRTTPGIGAT 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNMQ 112 V+ I+QDF G TGR LD+AI+ GF ++ +G + ++RNG ++ + L + Sbjct: 61 VSRISQDFGLGQLEQTGRALDIAINGGGFITSANAISGDINFTRNGNLEIVASGTLQDAF 120 Query: 113 GLQLTGYP--ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G ++ G+P GTP + P +I+IP + T A+ L S Sbjct: 121 GDRIQGFPVDGAGTPTS----NVPADITIPTSRTVTDPGTGATQDFQLTSV--------- 167 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----------GDNNWQVYTQDSSDPN 219 ++ +G +T S G + +++ + T G W+ T +S DP Sbjct: 168 ------GFDARGVLTATYSDGFSEPVAMLSLATFPANGGLRSIGQTKWEA-TAESGDPE 219 >UniRef50_Q310Y8 Flagellar hook protein FlgE n=3 Tax=Desulfovibrio RepID=Q310Y8_DESDG Length = 527 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 75/123 (60%) Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G L + + DG + G YSN L QI L +F + + L EG N++S + +S Sbjct: 404 QDGYTFGFLQNVTVTRDGILQGRYSNGAVLDLYQITLYDFQSKDNLRREGGNLFSESNAS 463 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G+A G A +GT+ + +LE SNVDL+KE VNMI QR +QSN++ I T D +L ++ Sbjct: 464 GLAAPGPANANGYGTVNSNSLEQSNVDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVI 523 Query: 400 NLR 402 ++ Sbjct: 524 QMK 526 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 67/287 (23%) Query: 17 LDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVKVAGITQDFTDGTTTN 68 ++V+GNNIAN T GFK F D + +VG GV + I DF+ G+ Sbjct: 1 MNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQVGRGVGIGTIYGDFSQGSFET 60 Query: 69 TGRGLDVAISQNGFFRL-VDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPT 127 T D+AI GFF + + +Y+R G F+ D+ LV+ G L G+ P+ Sbjct: 61 TTEATDLAIGGRGFFAVSPKGEETAYYTRAGNFRFDKEGYLVDPHGYVLQGWQIETPRPS 120 Query: 128 --------------IQQGANPTNISIPNTLMAAKTTTTASMQINL----------NSSDP 163 I+ P +I +P K T+ ++ NL N+++P Sbjct: 121 LATSTAGSVSSTSKIKGAGVPKDIQLPGFTAEPKHTSNVTIISNLDDASGGDNSTNAANP 180 Query: 164 L--------PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----------TGD 205 + T P + N+ +Y + ++ V+D G AH++++Y+ + +G Sbjct: 181 MFALFNSWDGTAEPPLSENSFAY--QTTIKVYDEGGTAHNLTIYYDQVASDTISGEGSGQ 238 Query: 206 NNWQ-VYTQDSSD-------------PNSIAKTATTLEFNANGTLVD 238 +W+ + T D +D P + A TL F+++G L+D Sbjct: 239 KHWEYIVTMDPADEQRSINGIDFKGTPAAGMLMAGTLTFDSSGQLID 285 >UniRef50_A6BBC3 Flagellar hook protein (Fragment) n=2 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BBC3_VIBPA Length = 335 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 4/160 (2%) Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT 226 VTPF ++ S+N + V+DS GN+H ++ YF KT DN W+V Q ++ Sbjct: 174 VTPFDPADPTSFNSSYTTQVYDSLGNSHTVTQYFTKTADNAWEVNVQVDGGKTPVSTIPV 233 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 T FN +GTL + N+A A GA + ++ S Q A + + NGY G Sbjct: 234 T--FNKDGTLAAPTGSFNVAFPAA-GANAMSVDINLKGSTQFG-AAFGVSTNSPNGYTSG 289 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 +L ++ D+G V Y+N Q+QL GQ+VLA+FAN +GLA Sbjct: 290 ELAGVRVEDNGMVYATYTNGQSQLQGQVVLADFANTQGLA 329 >UniRef50_B8FTP1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FTP1_DESHD Length = 426 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/113 (41%), Positives = 77/113 (68%), Gaps = 3/113 (2%) Query: 293 INDDGTVVGNYSNEQ---TQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 I+ +G + G YSN + ++ +GQ+ +ANFAN+ GL + G+N ++AT +SG+A +G AGT Sbjct: 312 IDGNGIISGIYSNGKGSASRRIGQLAIANFANDAGLQNVGNNFYAATNNSGIADIGAAGT 371 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + ++E SNVDLS+E +MIV QR +Q+N++ I D +L L++L+ Sbjct: 372 AGRGNIIPNSVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQELIDLK 424 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 18/122 (14%) Query: 6 AVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGS-----------KV 48 A+SGL +DV+GNNIAN T GFK +F+ M AGS +V Sbjct: 8 AISGLKNHQIKMDVVGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQGGTNPAQV 67 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 GLG V+ I Q T G++ NTG+ D I+ GFF ++ G + Y R G F D+N L Sbjct: 68 GLGSMVSSIDQIMTTGSSQNTGKSTDAMINGRGFFVFRNA-GQIVYGRAGAFSQDQNGYL 126 Query: 109 VN 110 + Sbjct: 127 TD 128 >UniRef50_B9L650 Flagellar basal body and hook protein n=1 Tax=Nautilia profundicola AmH RepID=B9L650_NAUPA Length = 642 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 16/225 (7%) Query: 186 VFDSQGNAHDMSVYFVKTGD-NNWQVYTQDSS----DPNSIAKTATTLEFNANGTLVDGA 240 + ++ G +SV F K NN V+ + S D N I+ + F+++G L Sbjct: 424 IIEANGQKDTISVTFTKQKVLNNQIVWNGEVSILDPDSNEISTQNFEMTFDSDGHL---- 479 Query: 241 MANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVV 300 ++ I + P +L+F + T + TQNG + G L +YQI+ +G + Sbjct: 480 ----LSPTQITISSPQNITLNFNMTSYAKTDLATSYSFTQNGVEEGFLKNYQIDQNGQIQ 535 Query: 301 GNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF---GTLTN 357 +SN Q +LGQI + +F N++GL S G N++ T +S A+L T GN+ ++ + Sbjct: 536 ALFSNGQMSVLGQIPVYHFQNDQGLESLGGNLFRETANSNKAILYTDQNGNYISGSSIIS 595 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LEASNVD S+ + +IV Q+ Y S A+T+ T DQ++ ++++ Sbjct: 596 NTLEASNVDFSQAMTELIVTQKAYSSAAKTVTTSDQMIQRAIDMK 640 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 36/221 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 +F ++GL + +D+ G+NIAN T G+K F+ +F+ S +G+G K Sbjct: 4 SFYNGITGLKSFQYGIDIWGDNIANINTTGYKEQIPEFSTLFSETLNSDPVYSDIGMGSK 63 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + G+ NT DV+I+ G+ + N + +Y+R G F D LV+ G Sbjct: 64 LSSTAINLDQGSLINTDNPFDVSINGEGWLAVKRYNDT-YYTRTGSFTRDAQGYLVDDNG 122 Query: 114 LQLT-------------GYP---ATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQI 156 L Y + T I Q + IS+P N ++ A TT A++ Sbjct: 123 DYLLVANANNLIQNADGSYSVNRSINTDNLISQNTQMSPISLPNNVILPAIATTEATLTS 182 Query: 157 NLNSSDPLPTVTP----------FSASNADSYNKKGSVTVF 187 NLN SD + T P +S AD + G VF Sbjct: 183 NLNDSDVITTTKPSTTESDFSALYSKDGADLKVRDGDSLVF 223 >UniRef50_D2L5W2 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5W2_9DELT Length = 518 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 80/126 (63%) Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 A +Q+G+ G L S ++++G V G +SN QT+ L + LA+F N L EG+N+ SAT Sbjct: 392 AQSQDGFASGTLNSTSVDENGVVSGTFSNGQTKDLYVLALADFRNPTDLRREGNNLLSAT 451 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 SG A G A +G + ++ +LE+SNVD++ E+VN+I QR +QSN++ + T D ++ Sbjct: 452 TESGAATTGRANSGIYDGISGYSLESSNVDMATEMVNLITLQRAFQSNSKVVTTADTMME 511 Query: 397 TLVNLR 402 + ++ Sbjct: 512 KALEIK 517 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 36/247 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM---FAG------SKVGLGV 52 A VSG+ + + + NN+AN+ T G+KS FADM AG S++G+GV Sbjct: 3 AIWTGVSGMLSYSQGIANTSNNLANTNTVGYKSSRMLFADMISELAGSTTDTNSQIGMGV 62 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAIS-QNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVN 110 +V ++ G + +D+AI ++G+F + D + +Y+R G F + + LV+ Sbjct: 63 QVGTVSMSTGVGAIATGDQSMDMAIDGEHGYFTVKDPVSDKTYYTRAGDFNFNTDGYLVS 122 Query: 111 MQGLQLTGYPA----------TGTP-PTIQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 G ++ G+ TG+ P + +PT+I I + + A+ T + SM NL+ Sbjct: 123 PTGNRVQGWAVDQAAVTQAERTGSVLPEVPVTGDPTDIRITDFTLPAQATGSVSMITNLD 182 Query: 160 S-SDP--LPTVTPFSASNADSYNKK----------GSVTVFDSQGNAHDMSVYFVKTGDN 206 S +DP L P+ S SY+ + V+D++G AH ++V + K D Sbjct: 183 SLTDPGILDATDPY-CSMFKSYDAANTPPATAAYTSDIKVYDAEGGAHSLTVNYSKVTDT 241 Query: 207 NWQVYTQ 213 + Y + Sbjct: 242 GGKEYWE 248 >UniRef50_UPI00016C0DB8 hypothetical protein Epulo_06138 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0DB8 Length = 473 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 4/121 (3%) Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G G++ + + DG + YSN +LLGQ+ + F N GL DNV+ +T +SG Sbjct: 356 GKAAGEMQGFDVGTDGKITAYYSNGDIKLLGQVAVTYFDNLAGLEKVADNVFKSTANSG- 414 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G G G+ G LE SNVDLSKE MI QR YQ++++TI T D++L L+NL Sbjct: 415 ---DFDGVGAAGSFATGTLEMSNVDLSKEFTEMITTQRGYQASSKTITTSDEMLQELINL 471 Query: 402 R 402 + Sbjct: 472 K 472 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 34/221 (15%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------------K 47 VSGL + +DVIGNNIAN T GFKS +FAD++ + + Sbjct: 9 VSGLQSHQLKMDVIGNNIANVNTIGFKSQRVTFADVYYQTTQSATTANEMTGLGGMNAMQ 68 Query: 48 VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRN 107 +GLG V+ I T G+ T D+ I + F + D+ G+ +Y+R+G F++DE Sbjct: 69 IGLGTSVSSIDMLMTPGSAQRTDNPFDLMIEDDAMFIVSDATGT-YYTRSGAFRVDERGT 127 Query: 108 LVNMQGLQLTGYPATGTPPTIQQG-ANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLP 165 LV G+++ G+PA I +G ++ P N +TTT ++ NLN D + Sbjct: 128 LVIPNGMRVQGWPANEIGTEIMRGTVGDLKLNTPENNSADPQTTTDVNITGNLNVDDSI- 186 Query: 166 TVTPFSASNADSYNKK---GSVTVFDSQGNAHDMSVYFVKT 203 NAD ++ +D+ G + M + F T Sbjct: 187 --------NADGTTASPIYSAIKFYDTLGTQYSMPITFTAT 219 >UniRef50_B0MPE1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPE1_9FIRM Length = 521 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 70/116 (60%) Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 DL S IN+DGT+ G +S +LG+I + F N GL G + W T SSG + Sbjct: 405 DLDSVYINEDGTIYGVHSVHGIIMLGRIDIVTFDNPNGLEQVGSSYWRETLSSGQPQVNI 464 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 AG ++ +GALE SNVDLS+E +MI+ QR +Q+N++ I T D +L +VNL+ Sbjct: 465 AGENGSASVVSGALEMSNVDLSQEFSDMIITQRGFQANSRIITTSDTMLEEIVNLK 520 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 19/154 (12%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF--------AGS---------KVG 49 VSGL +DVIGNNIAN T GFK+ +F +++ AGS +VG Sbjct: 9 VSGLKTHQQKMDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQGGVNPSQVG 68 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G K+ I Q T + D A+S +GFF+++D G++FYSR G F +D NLV Sbjct: 69 YGTKLGAIGQVMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFNVDNAGNLV 128 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL 143 + G + G +G + +N +P L Sbjct: 129 DSNGNMVLG--VSGDATGVDASSNRITFVVPEVL 160 >UniRef50_C4XPF7 Flagellar hook protein FlgE n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPF7_DESMR Length = 518 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 82/125 (65%) Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 ++Q+GY G++ + ++++G + G+++N QT+ L + LA+F N L G+N+ S T Sbjct: 393 SSQDGYAKGEMTATNVDENGVIWGSFTNGQTKALYVLALADFTNPTDLYRNGNNLLSPTT 452 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG A +G A +G F ++ LE+SNVD++ E+VN+I+ QR +Q+N++ + T + ++ T Sbjct: 453 ESGKATVGRANSGVFDSIAGNTLESSNVDMASEMVNLIINQRAFQANSKVVTTAESLMET 512 Query: 398 LVNLR 402 + ++ Sbjct: 513 ALQIK 517 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 54/251 (21%) Query: 7 VSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVKVAGIT 58 VSGL + + GNN+AN T G+KS FADM + GS++G GV+V I Sbjct: 8 VSGLLTYSQGIATTGNNLANVNTVGYKSSRMLFADMISTMAGGTSDGSQIGTGVQVGSIA 67 Query: 59 QDFTDGTTTNTGRGLDVAIS-QNGFFRLVD-SNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 G+ + D+AI+ + G+F + D +N +Y+R G F D+N NL++ G + Sbjct: 68 LQTEVGSLQDASNSTDLAITGERGYFVVKDAANDKTYYTRAGDFNFDKNGNLMSATGCNV 127 Query: 117 TGY--------------------PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI 156 G+ P TGT T+I+I + + + T T + Sbjct: 128 QGWAVDQDAILKAKRNNVILSEVPTTGT---------VTDITIKDFTIDPQATGTMEVVT 178 Query: 157 NLNS---------SDPLPTVTP-FSASN----ADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 NL+S +DP T+ + A+N ADS + + ++ ++DS G AH +VY+ K Sbjct: 179 NLDSQSSVGELDATDPYFTMFKNYDATNDTPVADS-DYQATIKIYDSNGVAHTATVYYSK 237 Query: 203 TGDNNWQVYTQ 213 T DN+ + Y + Sbjct: 238 TSDNSGKEYWE 248 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A1J2 Flagellar hook protein flgE n=279 Tax=Proteobact... 418 e-115 UniRef50_C4U020 Flagellar hook protein FlgE n=2 Tax=Yersinia Rep... 371 e-101 UniRef50_A4TKA1 Flagellar hook protein FlgE n=34 Tax=Enterobacte... 368 e-100 UniRef50_C4SBL3 Flagellar basal body FlaE domain protein n=2 Tax... 362 1e-98 UniRef50_C5SD65 Putative uncharacterized protein n=1 Tax=Allochr... 356 7e-97 UniRef50_D0FQ44 Flagellar hook protein FlgE n=2 Tax=Erwinia pyri... 355 1e-96 UniRef50_D0I440 Flagellar hook protein FlgE n=1 Tax=Grimontia ho... 353 9e-96 UniRef50_C1DW30 Flagellar hook protein FlgE n=3 Tax=Sulfurihydro... 350 6e-95 UniRef50_A2SKD4 Flagellar basal body and hook protein n=3 Tax=Be... 349 1e-94 UniRef50_A9IKQ4 FlgE protein n=2 Tax=Bordetella RepID=A9IKQ4_BORPD 348 2e-94 UniRef50_Q8D3G0 FlgE protein n=2 Tax=Enterobacteriaceae RepID=Q8... 348 2e-94 UniRef50_Q74G30 Flagellar hook protein FlgE n=2 Tax=Geobacter Re... 344 3e-93 UniRef50_Q6MHY9 FlgE protein n=1 Tax=Bdellovibrio bacteriovorus ... 341 2e-92 UniRef50_B4UFG1 Putative uncharacterized protein n=3 Tax=Anaerom... 341 3e-92 UniRef50_B5YIG4 Flagellar hook protein FlgE n=1 Tax=Thermodesulf... 340 4e-92 UniRef50_A1K948 FlgE protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K... 339 1e-91 UniRef50_B2AI79 FlgE: Flagellar hook protein n=6 Tax=Betaproteob... 339 1e-91 UniRef50_A4G6B1 Flagellar hook protein FlgE n=8 Tax=Betaproteoba... 338 2e-91 UniRef50_Q0AA87 Flagellar basal body FlaE domain protein n=1 Tax... 337 5e-91 UniRef50_B7R866 Flagellar basal body protein FlgE n=10 Tax=Therm... 336 1e-90 UniRef50_C4KAU4 Flagellar basal body FlaE domain protein n=1 Tax... 335 2e-90 UniRef50_B9MM16 Putative uncharacterized protein n=2 Tax=Clostri... 335 2e-90 UniRef50_D1NM00 Fagellar hook-basal body protein n=5 Tax=Clostri... 335 2e-90 UniRef50_A1WUE2 Flagellar basal body FlaE domain protein n=1 Tax... 335 2e-90 UniRef50_Q04UG8 Endoflagellar hook protein n=7 Tax=Spirochaetale... 333 6e-90 UniRef50_Q0AJ53 Flagellar basal body FlaE domain protein n=1 Tax... 333 9e-90 UniRef50_A1HN32 Putative uncharacterized protein n=1 Tax=Thermos... 332 1e-89 UniRef50_B0RT16 Complete genome, strain B100 n=13 Tax=Xanthomona... 331 3e-89 UniRef50_A8VS11 DNA topoisomerase I n=1 Tax=Bacillus selenitired... 330 4e-89 UniRef50_Q3A5C5 Flagellar biosynthesis, hook protein n=2 Tax=Des... 330 6e-89 UniRef50_A8MHE5 Putative uncharacterized protein n=2 Tax=Alkalip... 329 8e-89 UniRef50_A1WFE3 Flagellar basal body FlaE domain protein n=7 Tax... 329 1e-88 UniRef50_B9Z359 Flagellar basal body FlaE domain protein n=1 Tax... 329 1e-88 UniRef50_A5V5R7 Flagellar basal body FlaE domain protein n=1 Tax... 329 1e-88 UniRef50_Q67K22 Flagellar hook protein n=1 Tax=Symbiobacterium t... 328 2e-88 UniRef50_D2LSH1 Putative uncharacterized protein n=1 Tax=Bacillu... 328 2e-88 UniRef50_A4BQF0 Flagellar hook protein n=1 Tax=Nitrococcus mobil... 328 2e-88 UniRef50_A4SL12 Flagellar hook protein FlgE n=3 Tax=Gammaproteob... 327 5e-88 UniRef50_B2UJX1 Flagellar basal body FlaE domain protein n=3 Tax... 326 7e-88 UniRef50_C6MIR8 Putative uncharacterized protein n=1 Tax=Nitroso... 326 1e-87 UniRef50_A4A615 Flagellar hook protein FlgE n=3 Tax=unclassified... 325 2e-87 UniRef50_Q47I23 Putative uncharacterized protein n=1 Tax=Dechlor... 323 6e-87 UniRef50_A1T0J3 Flagellar hook protein FlgE n=18 Tax=Gammaproteo... 323 7e-87 UniRef50_A3NFX5 Flagellar hook protein FlgE n=13 Tax=Betaproteob... 323 9e-87 UniRef50_Q5DY15 Lateral flagellar hook protein (FlgE-like) n=39 ... 323 1e-86 UniRef50_Q0AYM8 Flagellar hook protein n=1 Tax=Syntrophomonas wo... 321 2e-86 UniRef50_D2S9L8 Flagellar hook-basal body protein n=3 Tax=Actino... 321 3e-86 UniRef50_B9L4C8 Flagellar hook protein FlgE n=3 Tax=Bacteria Rep... 321 3e-86 UniRef50_Q44767 Flagellar hook protein flgE n=26 Tax=Spirochaeta... 320 7e-86 UniRef50_D2TJ84 Lateral flagellar hook protein n=1 Tax=Citrobact... 319 1e-85 UniRef50_C6P7Q7 Putative uncharacterized protein n=1 Tax=Thermoa... 319 1e-85 UniRef50_C8WYV8 Fagellar hook-basal body protein n=1 Tax=Desulfo... 318 2e-85 UniRef50_C6WVA7 Flagellar basal body FlaE domain protein n=3 Tax... 317 4e-85 UniRef50_A0YG82 Flagellar hook protein n=1 Tax=marine gamma prot... 317 4e-85 UniRef50_A0LT62 Putative uncharacterized protein n=2 Tax=Actinom... 317 5e-85 UniRef50_B1K372 Flagellar basal body FlaE domain protein n=54 Ta... 316 1e-84 UniRef50_D0L1M3 Flagellar hook-basal body protein n=5 Tax=Chroma... 315 2e-84 UniRef50_Q7WA94 Flagellar hook protein FlgE n=3 Tax=Bordetella R... 314 3e-84 UniRef50_A3JJM5 Flagellar hook protein E n=1 Tax=Marinobacter sp... 314 4e-84 UniRef50_Q1I728 Flagellar hook protein FlgE n=8 Tax=Pseudomonas ... 313 6e-84 UniRef50_C2BUK6 Flagellar basal body and hook protein n=3 Tax=Mo... 312 1e-83 UniRef50_Q1QW31 Flagellar basal body FlaE n=2 Tax=Gammaproteobac... 311 2e-83 UniRef50_B4RV33 Flagellar hook protein n=29 Tax=Gammaproteobacte... 309 9e-83 UniRef50_Q7NU18 Flagellar hook protein flgE n=1 Tax=Chromobacter... 309 2e-82 UniRef50_A6GSX9 Flagellar hook protein E n=1 Tax=Limnobacter sp.... 308 2e-82 UniRef50_O07884 Flagellar hook protein flgE n=7 Tax=Treponema Re... 306 7e-82 UniRef50_B0THB1 Flagellar hook protein n=1 Tax=Heliobacterium mo... 306 1e-81 UniRef50_Q1ZPI3 Flagellar hook protein n=3 Tax=Photobacterium Re... 306 1e-81 UniRef50_C6NYI1 Flagellar hook protein flgE n=1 Tax=Acidithiobac... 306 1e-81 UniRef50_UPI0001850C8F flagellar hook protein FlgE n=1 Tax=Bacil... 305 2e-81 UniRef50_Q9X5Y0 Flagellar hook protein flgE n=2 Tax=Rhizobiaceae... 304 3e-81 UniRef50_Q15R85 Flagellar basal body FlaE n=1 Tax=Pseudoalteromo... 304 3e-81 UniRef50_A8GYL4 Flagellar basal body FlaE domain protein n=13 Ta... 303 1e-80 UniRef50_A4C6G9 Flagellar hook protein n=2 Tax=Alteromonadales R... 301 2e-80 UniRef50_Q48GC0 Flagellar hook protein FlgE n=10 Tax=Pseudomonas... 301 4e-80 UniRef50_A7K5D1 Flagellar hook protein FlgE n=56 Tax=Vibrionales... 300 5e-80 UniRef50_A6W8K5 Putative uncharacterized protein n=1 Tax=Kineoco... 299 1e-79 UniRef50_Q3J1S9 Flagellar hook protein FlgE n=5 Tax=Rhodobacter ... 298 2e-79 UniRef50_A6X6N9 Flagellar basal body FlaE domain protein n=1 Tax... 298 3e-79 UniRef50_B8KBZ1 Flagellar hook protein n=6 Tax=Vibrionaceae RepI... 297 5e-79 UniRef50_Q11LP2 Flagellar basal body FlaE n=7 Tax=Alphaproteobac... 297 6e-79 UniRef50_C6XF46 Flagellar hook protein FlgE n=1 Tax=Candidatus L... 295 2e-78 UniRef50_Q8K9K6 Flagellar hook protein flgE n=4 Tax=Buchnera aph... 295 2e-78 UniRef50_Q1IR53 Flagellar basal body FlaE n=2 Tax=Acidobacteria ... 294 3e-78 UniRef50_A6F9Q0 Flagellar hook protein n=2 Tax=Gammaproteobacter... 294 4e-78 UniRef50_A1UTT0 Flagellar hook protein FlgE n=1 Tax=Bartonella b... 291 4e-77 UniRef50_A6CQ97 Flagellar hook protein n=1 Tax=Bacillus sp. SG-1... 290 5e-77 UniRef50_Q5ZW68 Flagellar hook protein FlgE n=5 Tax=Legionella R... 289 9e-77 UniRef50_O52070 Flagellar hook protein flgE n=37 Tax=Rhizobiales... 287 4e-76 UniRef50_B6R7Z8 Flagellar hook protein FlgE n=1 Tax=Pseudovibrio... 286 1e-75 UniRef50_Q2KCE1 Flagellar hook protein n=27 Tax=Alphaproteobacte... 285 2e-75 UniRef50_A6DYV2 Flagellar hook protein FlgE n=1 Tax=Roseovarius ... 285 3e-75 UniRef50_B1M7H7 Flagellar basal body FlaE domain protein n=8 Tax... 284 3e-75 UniRef50_C7LUH2 Putative uncharacterized protein n=1 Tax=Desulfo... 283 8e-75 UniRef50_B6AMB9 Probable flagellar hook protein FlgE n=2 Tax=Lep... 283 1e-74 UniRef50_C6QF26 Flagellar basal body FlaE domain protein n=1 Tax... 283 1e-74 UniRef50_Q2RZC6 Flagellar biosynthesis cell-distal portion of ba... 280 7e-74 UniRef50_A0LDL2 Putative uncharacterized protein n=1 Tax=Magneto... 279 2e-73 UniRef50_Q0EZL8 Putative uncharacterized protein n=1 Tax=Maripro... 277 3e-73 UniRef50_UPI00016C0DB8 hypothetical protein Epulo_06138 n=1 Tax=... 277 5e-73 UniRef50_D1U366 Putative uncharacterized protein n=1 Tax=Desulfo... 277 6e-73 UniRef50_Q1MRH2 Flagellar hook protein FlgE n=6 Tax=Desulfovibri... 277 6e-73 UniRef50_C9LSP4 Flagellar hook protein FlgE n=1 Tax=Selenomonas ... 276 1e-72 UniRef50_C6HWM7 Probable flagellar hook protein FlgE n=1 Tax=Lep... 276 1e-72 UniRef50_Q6AGA2 Flagellar hook protein n=1 Tax=Leifsonia xyli su... 274 5e-72 UniRef50_UPI00016C5508 hypothetical protein GobsU_27906 n=1 Tax=... 272 1e-71 UniRef50_C5SQ30 Putative uncharacterized protein n=1 Tax=Asticca... 272 2e-71 UniRef50_B9JZL6 Flagellar hook protein n=1 Tax=Agrobacterium vit... 271 4e-71 UniRef50_C4Z5G6 Flagellar hook protein FlgE n=2 Tax=Clostridiale... 269 1e-70 UniRef50_B8FTP1 Putative uncharacterized protein n=1 Tax=Desulfi... 269 2e-70 UniRef50_C5CYE8 Putative uncharacterized protein n=1 Tax=Variovo... 268 2e-70 UniRef50_A0Q031 Flagellar basal-body rod protein FlgG n=1 Tax=Cl... 268 2e-70 UniRef50_Q01PQ4 Putative uncharacterized protein n=1 Tax=Candida... 268 3e-70 UniRef50_B6IQC5 Flagellar hook protein FlgE n=1 Tax=Rhodospirill... 267 5e-70 UniRef50_Q1YLP3 Putative flagellar hook protein FlgE n=1 Tax=Aur... 266 1e-69 UniRef50_A0AGF2 Complete genome n=21 Tax=Listeria RepID=A0AGF2_L... 265 2e-69 UniRef50_A9KNF2 Putative uncharacterized protein n=1 Tax=Clostri... 264 5e-69 UniRef50_B4RG77 Flagellar hook protein FlgE n=1 Tax=Phenylobacte... 263 9e-69 UniRef50_Q63D88 Flagellar hook protein n=35 Tax=Bacillus cereus ... 262 1e-68 UniRef50_Q89F43 Flagellar hook protein n=1 Tax=Bradyrhizobium ja... 262 1e-68 UniRef50_B7HLV4 Flagellar hook protein n=32 Tax=Bacillus cereus ... 262 2e-68 UniRef50_A7GNH9 Putative uncharacterized protein n=1 Tax=Bacillu... 261 4e-68 UniRef50_Q2CGG5 Flagellar hook protein FlgE, putative n=3 Tax=Rh... 259 1e-67 UniRef50_C5SMJ1 Putative uncharacterized protein n=1 Tax=Asticca... 259 1e-67 UniRef50_UPI0001BCD67A flagellar hook protein FlgE n=1 Tax=Selen... 259 1e-67 UniRef50_Q28JM2 Flagellar hook protein FlgE putative n=30 Tax=Ba... 259 2e-67 UniRef50_C6XM57 Putative uncharacterized protein n=1 Tax=Hirschi... 257 4e-67 UniRef50_C4G364 Putative uncharacterized protein n=1 Tax=Abiotro... 257 6e-67 UniRef50_C2PD26 Flagellar hook protein FlgE n=1 Tax=Bacillus cer... 257 7e-67 UniRef50_C6NWL1 Flagellar hook protein flgE n=2 Tax=Proteobacter... 256 8e-67 UniRef50_A7HW68 Putative uncharacterized protein n=1 Tax=Parviba... 256 1e-66 UniRef50_B7GGB1 Flagellar hook protein FlgE n=1 Tax=Anoxybacillu... 255 2e-66 UniRef50_C4ZAN8 Flagellar hook protein n=1 Tax=Eubacterium recta... 255 3e-66 UniRef50_A0NPJ1 Putative uncharacterized protein n=1 Tax=Labrenz... 255 3e-66 UniRef50_Q0G073 Flagellar hook protein E n=1 Tax=Fulvimarina pel... 254 3e-66 UniRef50_B8J3H7 Putative uncharacterized protein n=1 Tax=Desulfo... 254 5e-66 UniRef50_A8TLX3 Flagellar basal body FlaE domain protein n=1 Tax... 252 2e-65 UniRef50_C7M216 Putative uncharacterized protein n=1 Tax=Acidimi... 252 2e-65 UniRef50_D0XTV6 Flagellar basal body FlaE domain protein n=1 Tax... 251 3e-65 UniRef50_Q24T89 Putative uncharacterized protein n=1 Tax=Desulfi... 251 4e-65 UniRef50_D0XNJ6 Putative uncharacterized protein n=1 Tax=Brevund... 251 5e-65 UniRef50_B1TBA9 Putative uncharacterized protein n=1 Tax=Burkhol... 251 5e-65 UniRef50_A9DSB3 Flagellar hook protein FlgE n=1 Tax=Oceanibulbus... 249 2e-64 UniRef50_C5RFU7 Putative uncharacterized protein n=1 Tax=Clostri... 247 6e-64 UniRef50_D1TF51 Flagellar hook protein (Fragment) n=1 Tax=Burkho... 246 8e-64 UniRef50_A3UFN4 Flagellar hook protein n=2 Tax=Hyphomonadaceae R... 246 1e-63 UniRef50_Q6LW64 Hypothetical flagellar hook protein FlgE n=1 Tax... 246 1e-63 UniRef50_Q07TK1 Flagellar basal body FlaE domain protein n=8 Tax... 244 5e-63 UniRef50_C6C0P3 Putative uncharacterized protein n=1 Tax=Desulfo... 242 1e-62 UniRef50_O67711 Flagellar hook protein flgE n=2 Tax=Aquificaceae... 240 8e-62 UniRef50_A4U4J9 Flagellar hook protein FlgE n=1 Tax=Magnetospiri... 238 2e-61 UniRef50_A3SFR5 Putative flagellar hook protein n=2 Tax=Sulfitob... 236 9e-61 UniRef50_B7ATR6 Putative uncharacterized protein n=1 Tax=Bactero... 235 2e-60 UniRef50_A4WW59 Putative uncharacterized protein n=4 Tax=Rhodoba... 234 3e-60 UniRef50_B9R0M9 Conserved domain protein n=1 Tax=Labrenzia alexa... 233 7e-60 UniRef50_D1U447 Putative uncharacterized protein n=1 Tax=Desulfo... 231 4e-59 UniRef50_Q12T69 Putative uncharacterized protein n=1 Tax=Shewane... 231 5e-59 UniRef50_Q2RRL4 Putative uncharacterized protein n=1 Tax=Rhodosp... 228 2e-58 UniRef50_B6BH25 Conserved domain protein n=2 Tax=Campylobacteral... 225 3e-57 UniRef50_A5FUQ6 Flagellar basal body FlaE domain protein n=1 Tax... 223 1e-56 UniRef50_D2M8A9 Flagellar basal body FlaE domain protein n=1 Tax... 222 2e-56 UniRef50_Q2RRB3 Putative uncharacterized protein n=2 Tax=Rhodosp... 219 1e-55 UniRef50_Q5FS48 Flagellar hook protein FlgE n=2 Tax=cellular org... 219 2e-55 UniRef50_C8WBV9 Putative uncharacterized protein n=2 Tax=Zymomon... 219 2e-55 UniRef50_B0ULI9 Flagellar basal body FlaE domain protein n=10 Ta... 218 3e-55 UniRef50_Q9Z5T5 Flagellar hook protein n=2 Tax=Zymomonas mobilis... 217 8e-55 UniRef50_Q97H59 Flagellar hook protein FlgE n=1 Tax=Clostridium ... 209 2e-52 UniRef50_C6N701 Putative uncharacterized protein n=1 Tax=Legione... 202 3e-50 UniRef50_A5W0G4 Flagellar basal body FlaE domain protein n=3 Tax... 200 6e-50 UniRef50_B9MGE1 Flagellar basal body FlaE domain protein n=3 Tax... 199 2e-49 UniRef50_B5JK44 Conserved domain protein n=1 Tax=Verrucomicrobia... 198 3e-49 UniRef50_D1B6B8 Putative uncharacterized protein n=1 Tax=Therman... 197 5e-49 UniRef50_A6Q2N3 Flagellar basal body and hook protein FlgE n=2 T... 195 3e-48 UniRef50_Q6AJT3 Related to flagellar hook protein (FlgE) n=1 Tax... 194 4e-48 UniRef50_B2V236 Flagellar hook protein FlgE n=9 Tax=Clostridium ... 193 1e-47 UniRef50_C0QPA5 Flagellar basal body and hook protein FlgE n=1 T... 192 1e-47 UniRef50_Q485P3 Flagellar hook protein FlgE n=1 Tax=Colwellia ps... 192 2e-47 UniRef50_Q48GC1 Flagellar basal-body protein, putative n=6 Tax=P... 191 4e-47 UniRef50_Q2LSZ5 Flagellar hook protein n=1 Tax=Syntrophus acidit... 188 4e-46 UniRef50_C1DC21 Flagellar hook protein FlgE n=1 Tax=Laribacter h... 187 4e-46 UniRef50_C1TKJ0 Flagellar hook protein FlgE n=1 Tax=Dethiosulfov... 187 5e-46 UniRef50_B1XWJ5 Putative uncharacterized protein n=1 Tax=Leptoth... 187 5e-46 UniRef50_A6W1A3 Putative uncharacterized protein n=2 Tax=Marinom... 187 8e-46 UniRef50_B9L651 Flagellar hook protein FlgE n=2 Tax=Nautiliaceae... 186 1e-45 UniRef50_B7RBK4 Flagellar hook protein n=3 Tax=Thermotogaceae Re... 185 2e-45 UniRef50_Q9ZKY0 Flagellar hook protein flgE n=23 Tax=Helicobacte... 185 2e-45 UniRef50_A0RRQ1 Flagellar hook protein FlgE n=4 Tax=Proteobacter... 183 1e-44 UniRef50_Q1MQV7 Flagellar hook protein FlgE n=1 Tax=Lawsonia int... 182 2e-44 UniRef50_Q1N302 Flagellar hook protein FlgE n=3 Tax=Proteobacter... 181 3e-44 UniRef50_B7IDJ5 Flagellar hook protein FlgE n=2 Tax=Thermosipho ... 181 5e-44 UniRef50_Q1JZT1 Putative uncharacterized protein n=1 Tax=Desulfu... 181 5e-44 UniRef50_Q2BQT8 Flagellar hook protein (FlgE)-like n=1 Tax=Neptu... 180 6e-44 UniRef50_C0QAJ6 FlgE n=1 Tax=Desulfobacterium autotrophicum HRM2... 179 2e-43 UniRef50_B8CYR1 Flagellar hook protein FlgE, epsilon proteobacte... 179 2e-43 UniRef50_A7GVS8 Flagellar hook protein FlgE n=2 Tax=Campylobacte... 178 3e-43 UniRef50_D2C6I0 Fagellar hook-basal body protein n=3 Tax=Thermot... 178 3e-43 UniRef50_B2A353 Putative uncharacterized protein n=1 Tax=Natrana... 178 4e-43 UniRef50_A4BEL5 Flagellar hook protein FlgE n=2 Tax=cellular org... 177 6e-43 UniRef50_Q72C41 Flagellar hook protein FlgE n=3 Tax=Desulfovibri... 177 1e-42 UniRef50_C7LRK3 Putative uncharacterized protein n=2 Tax=Desulfo... 176 1e-42 UniRef50_A7HN97 Putative uncharacterized protein n=1 Tax=Fervido... 175 2e-42 UniRef50_C5V017 Putative uncharacterized protein n=1 Tax=Gallion... 175 3e-42 UniRef50_C6RJ18 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 175 3e-42 UniRef50_Q2SDU1 Flagellar hook protein FlgE n=3 Tax=Gammaproteob... 175 4e-42 UniRef50_Q30UL8 Flagellar hook FlgE n=2 Tax=Campylobacterales Re... 174 4e-42 UniRef50_Q1YV97 Flagellar hook protein FlgE n=1 Tax=gamma proteo... 173 1e-41 UniRef50_A5N7C1 FlgE n=2 Tax=Clostridium kluyveri RepID=A5N7C1_C... 173 1e-41 UniRef50_B9CY95 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 172 3e-41 UniRef50_B8DS27 Putative uncharacterized protein n=1 Tax=Desulfo... 172 3e-41 UniRef50_Q4JMN8 Predicted flagellar hook protein n=1 Tax=uncultu... 172 3e-41 UniRef50_C5ZVV6 Flagellar hook protein n=2 Tax=Helicobacter RepI... 171 3e-41 UniRef50_C5BRS0 Flagellar basal body protein FlgE n=1 Tax=Teredi... 171 4e-41 UniRef50_Q21IK9 Flagellar basal body FlaE n=3 Tax=Bacteria RepID... 170 8e-41 UniRef50_C1A555 Flagellar hook protein FlgE n=1 Tax=Gemmatimonas... 169 2e-40 UniRef50_D1B5D3 Flagellar hook protein FlgE n=1 Tax=Sulfurospiri... 169 2e-40 UniRef50_C1SLD6 Flagellar hook protein FlgE n=1 Tax=Denitrovibri... 168 2e-40 UniRef50_C8QYQ3 Putative uncharacterized protein n=1 Tax=Desulfu... 168 2e-40 UniRef50_Q1NLV6 Putative uncharacterized protein n=2 Tax=delta p... 168 3e-40 UniRef50_D2L1Z5 Putative uncharacterized protein n=1 Tax=Desulfo... 167 6e-40 UniRef50_B5Y7E4 Flagellar hook protein FlgE n=1 Tax=Coprothermob... 167 7e-40 UniRef50_C3XKG1 Flagellar hook protein FlgE n=1 Tax=Helicobacter... 167 8e-40 UniRef50_B5J6Y8 Conserved domain protein n=3 Tax=cellular organi... 166 2e-39 UniRef50_C4V4D1 Flagellar hook protein FlgE n=2 Tax=Selenomonas ... 165 3e-39 UniRef50_C6BZU9 Putative uncharacterized protein n=1 Tax=Desulfo... 165 3e-39 UniRef50_UPI0001C35D09 hypothetical protein ChatD1_21894 n=1 Tax... 165 4e-39 UniRef50_Q5HS69 Flagellar hook protein n=15 Tax=Campylobacter Re... 165 4e-39 UniRef50_B9KEI8 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 163 8e-39 UniRef50_B2JJ19 Flagellar basal body FlaE domain protein n=6 Tax... 162 2e-38 UniRef50_B8FK43 Putative uncharacterized protein n=1 Tax=Desulfa... 162 3e-38 UniRef50_A7H673 Flagellar hook protein n=8 Tax=Campylobacter jej... 161 4e-38 UniRef50_C4XPF7 Flagellar hook protein FlgE n=1 Tax=Desulfovibri... 161 6e-38 UniRef50_Q3ADD6 Flagellar basal-body rod protein FlgG n=1 Tax=Ca... 160 1e-37 UniRef50_Q31FL0 Flagellar hook protein FlgE n=1 Tax=Thiomicrospi... 160 1e-37 UniRef50_C6BXM1 Putative uncharacterized protein n=1 Tax=Desulfo... 160 1e-37 UniRef50_C4XMS5 Flagellar hook protein FlgE n=1 Tax=Desulfovibri... 160 1e-37 UniRef50_B4U878 Putative uncharacterized protein n=1 Tax=Hydroge... 159 2e-37 UniRef50_C9R9Y6 Fagellar hook-basal body protein n=1 Tax=Ammonif... 159 2e-37 UniRef50_B8J087 Putative uncharacterized protein n=1 Tax=Desulfo... 158 2e-37 UniRef50_B9K8L8 Flagellar basal-body rod protein FlgG n=106 Tax=... 158 4e-37 UniRef50_A9BEX9 Putative uncharacterized protein n=1 Tax=Petroto... 158 4e-37 UniRef50_D2L5W2 Putative uncharacterized protein n=1 Tax=Desulfo... 157 6e-37 UniRef50_C0GT28 Putative uncharacterized protein n=1 Tax=Desulfo... 156 1e-36 UniRef50_Q310Y8 Flagellar hook protein FlgE n=3 Tax=Desulfovibri... 156 1e-36 UniRef50_A4U4W8 Probable: Flagellar hook protein FlgE, gene: FLG... 156 2e-36 UniRef50_A4J757 Putative uncharacterized protein n=1 Tax=Desulfo... 156 2e-36 UniRef50_C8W1G5 Putative uncharacterized protein n=1 Tax=Desulfo... 155 2e-36 UniRef50_D1TKK3 Putative flagellar hook protein FlgE n=1 Tax=Bur... 155 2e-36 UniRef50_Q7UII2 Flagellar hook protein FlgE n=1 Tax=Rhodopirellu... 155 3e-36 UniRef50_Q1PUJ3 Similar to flagellar hook protein n=1 Tax=Candid... 155 3e-36 UniRef50_A3ZNY1 Flagellar hook protein FlgE n=1 Tax=Blastopirell... 154 5e-36 Sequences not found previously or not previously below threshold: >UniRef50_P0A1J2 Flagellar hook protein flgE n=279 Tax=Proteobacteria RepID=FLGE_SALTI Length = 403 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 353/404 (87%), Positives = 373/404 (92%), Gaps = 3/404 (0%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD Sbjct: 1 MSFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG+QLTGYP Sbjct: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 ATGTPPTIQQGANP I+IPNTLMAAK+TTTASMQINLNS+DP+P+ TPFS S+ADSYNK Sbjct: 121 ATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNK 180 Query: 181 KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD--PNSIAKTATTLEFNANGTLVD 238 KG+VTV+DSQGNAHDM+VYFVKT DN W VYT DSSD + +TTL+FN NG L Sbjct: 181 KGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNENGILES 240 Query: 239 GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 G NI TG INGA ATFSLSFLNSMQQNTGANNIVAT QNGYKPGDLVSYQIN+DGT Sbjct: 241 GG-TVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGT 299 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 VVGNYSNEQ Q+LGQIVLANFANNEGLAS+GDNVW+ATQ+SGVALLGTAG+GNFG LTNG Sbjct: 300 VVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNG 359 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR Sbjct: 360 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 403 >UniRef50_C4U020 Flagellar hook protein FlgE n=2 Tax=Yersinia RepID=C4U020_YERKR Length = 437 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 260/437 (59%), Positives = 314/437 (71%), Gaps = 35/437 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQAVSGLNAA++NLDVIGNNIANSAT GFK+G+ SFADMFAGS+ G+GVKVAGITQD Sbjct: 1 MGFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F DGTTT T R LD+AISQNGFFR+ DS G +FY+RNGQFKLDENRN+VNMQGL LTGYP Sbjct: 61 FNDGTTTTTNRRLDLAISQNGFFRMQDSTGGIFYARNGQFKLDENRNIVNMQGLNLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT----------VTPF 170 ATGTPPT+QQGANP +SIP ++ AK TT+ +M NL S+ + F Sbjct: 121 ATGTPPTVQQGANPVPLSIPQGMIPAKATTSGNMVANLTSTHNIIPAETTSSAGVTTPTF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-----NNWQVYTQDSSD-PNSIAKT 224 D+Y+ ++T FDS GN H+++V++VK + N+W VYT+DSS P +A+ Sbjct: 181 DPDKPDTYSFVNNITTFDSLGNRHEINVFYVKRSEDAVNGNSWDVYTRDSSAVPAQVAER 240 Query: 225 ATTLEFNANGTLVDGAMAN-------------------NIATGAINGAEPATFSLSFLNS 265 ++ F+ NG LV+ I G +NGA F+L+ S Sbjct: 241 RGSMRFDTNGALVETTNPVITPPATTPVETPTTVPFTLTIPMGIVNGAPAQDFALNVAGS 300 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 QQNTG ++IV Q GY G+ +QIN+DG+VVG YSN+QTQLLGQIV+ NFAN EGL Sbjct: 301 KQQNTGTDSIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQLLGQIVMVNFANPEGL 360 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +SEG+NVW T SSG A+LGTAG+G FGTLT+GALE+SNVDLSKELVNMIVAQRNYQSNA Sbjct: 361 SSEGNNVWKETLSSGNAILGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNA 420 Query: 386 QTIKTQDQILNTLVNLR 402 QTIKTQDQIL TLVNLR Sbjct: 421 QTIKTQDQILQTLVNLR 437 >UniRef50_A4TKA1 Flagellar hook protein FlgE n=34 Tax=Enterobacteriaceae RepID=A4TKA1_YERPP Length = 428 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 259/428 (60%), Positives = 316/428 (73%), Gaps = 26/428 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQAVSG+NAA++NLDVIGNNIANSAT GFK+G+ SFADMFAGS+ G+GVKVAGITQD Sbjct: 1 MGFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F DGT T T R LD+AISQNGFFR+ DS+G ++Y+RNGQFKLDENRN+VNMQGL LTGYP Sbjct: 61 FNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADSY 178 ATGTPPT+QQGANP +SIP +++AK TT+ +M NL S+ + +PF N D+Y Sbjct: 121 ATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSPFDPDNPDTY 180 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSSDPNSIAKTA-------- 225 + ++T FDS GN H+++V++VK T N W VYT+DSS + Sbjct: 181 SFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK 240 Query: 226 -TTLEFNANGTLVDGAMANN----------IATGAINGAEPATFSLSFLNSMQQNTGANN 274 ++ F++NG L + N I G +NGA +F+L+ S QQNTGA++ Sbjct: 241 RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADS 300 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 IVA Q GY G+ +QIN DG+VVG YSN+QTQLLGQIV+ NF+N EGL+SEGDNVW Sbjct: 301 IVAQNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWK 360 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 TQSSG LGTAG+G FGTLT+GALE+SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI Sbjct: 361 ETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 420 Query: 395 LNTLVNLR 402 L TLV+LR Sbjct: 421 LQTLVSLR 428 >UniRef50_C4SBL3 Flagellar basal body FlaE domain protein n=2 Tax=Yersinia RepID=C4SBL3_YERMO Length = 407 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 197/407 (48%), Positives = 261/407 (64%), Gaps = 7/407 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQ +SGLNAA+ LDV+GNNIANS T GFKSG+ +FAD+FAGS+VG+GV+V+ + Q+ Sbjct: 1 MGFSQGLSGLNAASQALDVVGNNIANSQTVGFKSGSIAFADVFAGSQVGMGVQVSSVNQN 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F+DG + LD+ I NGFFRL + G VFYSRNGQFK DEN ++N QG+ LTGY Sbjct: 61 FSDGVLGSGASSLDMGIQGNGFFRLTNEAGRVFYSRNGQFKQDENGFIINNQGMFLTGYQ 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSASNADSYN 179 A+GTPP IQ GA I IP+ M A+ + S+ NL+S ++ + F ++ SY+ Sbjct: 121 ASGTPPAIQPGAAVGPIQIPSGQMPARASDGGSLSGNLDSGTEVVDPAIKFDPADNKSYS 180 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT-----LEFNANG 234 V +DS GN H ++VY+VKT DN W+ Y+ D++ P L+F+ +G Sbjct: 181 SVSQVDGYDSLGNRHTINVYYVKTSDNEWKAYSSDTTSPKLDNNGDPVYQELELKFDTSG 240 Query: 235 TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 L ++ + A NG EP F L + M Q + + T GY PG + Y + Sbjct: 241 QLTTKPAKLSVQSAAYNGGEPLDFELDM-DGMTQQASDTAMASPTTTGYAPGQMNGYTVG 299 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 D+G ++ +YSN Q QLLGQ+VL+NF N GL+S+GDN WS T +SG + G AGTGN G Sbjct: 300 DNGQIIASYSNGQQQLLGQVVLSNFTNPGGLSSQGDNCWSETPASGQPVDGIAGTGNLGN 359 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L LEASNVDLSKE+VNMIV QRNYQSN+QTIKTQ ++L L NL Sbjct: 360 LFGNRLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQILANL 406 >UniRef50_C5SD65 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD65_CHRVI Length = 436 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 162/436 (37%), Positives = 228/436 (52%), Gaps = 34/436 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M+FS +SGL AAA +L+V GNN+ANS T GFK A FAD++A S K +GV++ Sbjct: 1 MSFSIGLSGLQAAAKDLEVTGNNVANSGTIGFKKSRAEFADIYASSFYTCVNKSAVGVRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQ 112 +TQ F+ G T LD+AI+ GFF L G Y+RNG F++D + +VN Sbjct: 61 DAVTQQFSQGNVELTDNTLDLAINGEGFFVLNSEAGQDGKVYTRNGAFQVDRDGYVVNSS 120 Query: 113 GLQLTGYPATGTPPTIQ--QGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G +L YP T + +I +P MA K TT +Q+NLNS + + T T Sbjct: 121 GQRLQAYPPTTPNSAVSAFDTGKLEDIQLPLDNMAPKATTEVELQVNLNSDETVITGTTP 180 Query: 171 SAS------------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT---QDS 215 + SYN + V+DS G D+++YFVKT +NW V+ + Sbjct: 181 PGPAFAFPTAPATDVDPTSYNWSTTYQVYDSLGKPRDVTMYFVKTAPDNWAVHVGMRDSA 240 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANN---------IATGAINGAEPATFSLSFLNSM 266 + T F A G N + NGA FS+ NS Sbjct: 241 GVMQDVGGGTNTAIFTAAGVFDTATSTPNPIAVSVGPFLTPPDDNGAGALAFSIDMSNST 300 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q + NN+ TQ+GY G L + ++ DG + YSN ++ +LGQ+ +ANF N +GL Sbjct: 301 QYHNSRNNLNDVTQDGYTSGTLSGFDVDADGAIFSRYSNGKSYVLGQVAMANFKNPQGLQ 360 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 GDN W + +SG + AG G G++ + ALE SNVDLS+ELVNMI AQRNY++NA+ Sbjct: 361 QLGDNNWGESYNSGEPIYAAAGDGRLGSIQSCALENSNVDLSQELVNMITAQRNYEANAK 420 Query: 387 TIKTQDQILNTLVNLR 402 TI T DQ+ T++N+R Sbjct: 421 TISTSDQMTQTILNIR 436 >UniRef50_D0FQ44 Flagellar hook protein FlgE n=2 Tax=Erwinia pyrifoliae RepID=D0FQ44_ERWPY Length = 410 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 195/411 (47%), Positives = 265/411 (64%), Gaps = 10/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+FSQ +SGLNAAA+ LDV+GNNIANS T+GFK+G+ FAD+FAG++ G+GV+VAG +Q+ Sbjct: 1 MSFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFAGAQ-GMGVQVAGSSQN 59 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN-MQGLQLTGY 119 F DG T TGR +D+ I+ NGFFRL+D G +YSRNGQF D N + N GL+LTGY Sbjct: 60 FKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLRLTGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 ATGTPP IQ GA I I T M +T+ + NL +S + T TPF ++ +++N Sbjct: 120 QATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGKLNGNLTASAEVVTKTPFDHTDGETFN 179 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT------TLEFNAN 233 + FDS GN H + +Y+VKT W+ Y D+S P + ++F+ N Sbjct: 180 SSSQIEAFDSLGNRHTIDIYYVKTATGEWKAYANDASAPVTSGTPPKSEYTELDIKFDEN 239 Query: 234 GTLVDGAMAN--NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 G L + A ++ N+ + +NGA P L Q + A+ +G+ G+ V++ Sbjct: 240 GKLTNDAASSILNVKSAGLNGATPLDLQLDLSGITQHESDASTFEPVKTDGHAAGNYVNF 299 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 QI D+G + NY N + QL+ Q+VLANFAN GL G+N W + SG +++GTAGTG+ Sbjct: 300 QIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVESPQSGGSIIGTAGTGS 359 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+LT GALE SNVDL E+VNMIV QRNYQSN+QTIKTQ ++L TLVNLR Sbjct: 360 FGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQTLVNLR 410 >UniRef50_D0I440 Flagellar hook protein FlgE n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I440_VIBHO Length = 401 Score = 353 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 151/405 (37%), Positives = 222/405 (54%), Gaps = 11/405 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---SKVGLGVKVAGI 57 M+ + +SGL A + ++ I +NI+N T G+KS F D++A GV+V+ + Sbjct: 1 MSINIGLSGLRATSDQINTISHNISNVGTVGYKSSRTEFQDVYAPQFGGGEFGGVEVSNV 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 Q FT G T+TGR D+AI+ GFF + NG Y+RNG F LD + LV GL+L Sbjct: 61 RQSFTSGAATSTGRNSDLAINGEGFFMVQQ-NGQRMYTRNGIFNLDSDGYLVTADGLRLQ 119 Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNA 175 GY + T Q T++ I MAAK TT S+ +NL++S + P F + Sbjct: 120 GYGVSETGSI--QNGALTDLQISTADMAAKVTTKVSLGVNLDASAAVIVPKEKKFDKDDP 177 Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGT 235 ++ S TV+DS G H+++ YFVKT +N W V+ +D + T LEF+ NG Sbjct: 178 STFTCSASTTVYDSLGGEHEITQYFVKTDENTWSVHY--VADGKELDPKNTQLEFDENGK 235 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 L+ ++ NG+ + ++ Q +I + Q+GY PG L + + Sbjct: 236 LIKPEDPISVTLTPKNGSATMKIEMD-VSEFTQFGSDFSINESKQDGYAPGKLAGWYFDA 294 Query: 296 DGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTL 355 DG+V YSN +TQL GQ+VLA F N EGL G W+ + SSG AL G GTG FG L Sbjct: 295 DGSVYARYSNGKTQLQGQLVLARFPNQEGLQQAGGTRWTESFSSGTALFGQPGTGQFGAL 354 Query: 356 TNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 GA E+SNVDL++E+V+++ AQ NYQ+NA+TI+ +++ L Sbjct: 355 RVGAYESSNVDLTEEMVSLMSAQSNYQANAKTIQASQEMVQILFQ 399 >UniRef50_C1DW30 Flagellar hook protein FlgE n=3 Tax=Sulfurihydrogenibium RepID=C1DW30_SULAA Length = 409 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 137/414 (33%), Positives = 220/414 (53%), Gaps = 22/414 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------KVG 49 +F AVSGLN +DVI +NIAN T GFKS +F D+ A S ++G Sbjct: 4 SFYTAVSGLNGNQKWIDVISDNIANVNTIGFKSERVTFEDLVAKSLTTFANNTPKNMEIG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G +A T+DF+ G+ NT LD+A+ GFF + D+ G+V+Y+R GQF+LD N ++V Sbjct: 64 GGSFIALTTKDFSQGSFQNTVNPLDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANGDIV 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTT-TASMQINLNSSDPLPTVT 168 N+ G++L G+ A I+IP +++ + TT NL+S + Sbjct: 124 NVDGMKLQGWKLD---TAGNISAALDKINIPYSILPSITTKINLVEPTNLDSRVNTISG- 179 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 +N ++N S+T++DS GN H ++ YF K+ N W V ++ + + TL Sbjct: 180 TIDPTNPATFNYANSMTIYDSLGNPHTLTFYFQKSSPNTWNVAAYVDNN-TTTPVGSGTL 238 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 +F++ G L+ G+ P T ++ Q ++ I Q+G+ GDL Sbjct: 239 QFDSTGKLISGSPITLSIPLTNGATTPQTVTVDLTQVKQV--ASDFIFYANQDGFAKGDL 296 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 + +++DG V G YSN + +L+ ++ +A F + E L +G+N++ S ++ T G Sbjct: 297 IGVSVSEDGVVRGMYSNGKVELIARLAVATFKDKEMLVRKGNNLYLPNTQSFTPII-TPG 355 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SNVD+SKE +N+I AQR YQ+NA+ I T DQIL +N++ Sbjct: 356 -GILSKVRSGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEAMNIK 408 >UniRef50_A2SKD4 Flagellar basal body and hook protein n=3 Tax=Betaproteobacteria RepID=A2SKD4_METPP Length = 420 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 163/422 (38%), Positives = 234/422 (55%), Gaps = 22/422 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLNAA+ NL++IGNN+AN++T+G KS A F D++A + VG+GV Sbjct: 1 MSFQQGLSGLNAASKNLEIIGNNVANASTFGAKSSRAEFGDVYANALNGSGTNMVGIGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q FT G T T +D+AI+ +GFF++ D Y+RNGQFK+D +VN G Sbjct: 61 LATVAQQFTQGNITTTDNPMDLAINGSGFFQVSDGKNPTMYARNGQFKIDREGFIVNNSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD--PLPTVTPFS 171 +L GYPA G + I +P +A + T ++++NL++ P Sbjct: 121 YKLLGYPADGQGVIVP--GQAQAIQLPTAGIAPRATDRIAIEMNLDARQAVTTPATGGID 178 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA-----T 226 + +YN SVTV+D++G ++ YF K+G + W VY + P S+ T T Sbjct: 179 FDDPATYNNATSVTVYDAKGQDVALTYYFQKSGADQWDVYVTANGTPISVDGTGAALPST 238 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN------SMQQNTGANNIVATTQ 280 T+ F ANG+ + +L S Q + +Q Sbjct: 239 TMTFPANGSAPTAPVGAVPINIPATTNAAGGTTLPITGIELDVTSATQYGSGFGVTDMSQ 298 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 GY PG L I +G ++ YSN Q++ GQ+ LANF N +GL G+NVW+ T +SG Sbjct: 299 TGYAPGQLSGISIEANGVIMARYSNGQSKPGGQLELANFRNPQGLQPLGNNVWATTFTSG 358 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 ++G AG GNFG L +GALE SN+DL+ ELVNMI AQR YQ+NAQT+KTQD ++ TLVN Sbjct: 359 DPVVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQRVYQANAQTVKTQDSMMQTLVN 418 Query: 401 LR 402 LR Sbjct: 419 LR 420 >UniRef50_A9IKQ4 FlgE protein n=2 Tax=Bordetella RepID=A9IKQ4_BORPD Length = 413 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 190/421 (45%), Positives = 250/421 (59%), Gaps = 27/421 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q +SGLNAAA NLDVIGNNIANS T GFKS TASFAD++A S+VGLGVKV+ I Q Sbjct: 1 MGFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASSRVGLGVKVSAINQR 60 Query: 61 FTDGTTTNTGRGLDVAISQ-NGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G T TG D+AI GFFRL D +G VFYSRNG+F +D++ LVN QG +LTGY Sbjct: 61 FSVGNVTVTGGEYDIAIDGPKGFFRLTDPSGGVFYSRNGEFLVDKDFYLVNAQGYRLTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 A G+ P ++ +P +A K T A +Q NLN++ P +PF + A + Sbjct: 121 AA------GAVGSAPVDLRLPQGNIAPKPTDAAGLQTNLNANADAIDPATSPFDPTLAST 174 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ-------VYTQDS------SDPNSIAKT 224 Y TV+DS GNAH ++ YFVK + YT D ++ + Sbjct: 175 YTDSVPTTVYDSLGNAHQLTQYFVKRAGDTVTNESVYEVYYTLDGEAMDPTTEAAGVWGG 234 Query: 225 ATTLEFNANGTLVDGAM---ANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 ATTL F+A G L + G + A+P ++S+ Q G++ TQN Sbjct: 235 ATTLTFDAAGRLTSAPTVDLSFATPGGTTSPADPLAITMSYDGVTQY--GSDFSPKITQN 292 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 GY G+ IN DGT+ NY+N +T ++G + LANF N +GL G+N W+ T +SG Sbjct: 293 GYSSGEYSGLSINSDGTLQANYTNGETAIIGTLALANFNNVQGLQPVGNNAWAETGASGQ 352 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LG GT T+ A+EASNVD+SKELVNMIVAQR YQ+NAQTIKTQD+++ L+N+ Sbjct: 353 PTLGQPGTNGLATVVGQAVEASNVDMSKELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 412 Query: 402 R 402 R Sbjct: 413 R 413 >UniRef50_Q8D3G0 FlgE protein n=2 Tax=Enterobacteriaceae RepID=Q8D3G0_WIGBR Length = 410 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 176/411 (42%), Positives = 252/411 (61%), Gaps = 10/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F Q ++G+N+AA LDVIGNNIANS T GFKS SF+D+F+GS VGLG +++ +TQ+ Sbjct: 1 MSFIQGINGINSAAQALDVIGNNIANSQTIGFKSSYVSFSDIFSGSMVGLGSQLSNVTQN 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F G+ + LD+AIS NGFFRL DS G ++++RNG+FKL+ +R +VN+Q LTGY Sbjct: 61 FASGSMVTGSKNLDMAISGNGFFRLSDSGGKIYFTRNGEFKLNSHRQIVNLQNKFLTGYQ 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 A G PP+I G++ NI IP+T M +T + NL S +P + F+ N SYN Sbjct: 121 ARGNPPSIDSGSSIENIIIPSTSMNPVVSTEGEIHGNLKSDVDVPKNSIFNIKNPKSYNF 180 Query: 181 KGSVTVFDSQGNAHDMSVYFV-KTGDNNWQVYTQDSS-----DPNSIAKTATTLEFNANG 234 + +DS G H + ++FV + NW V+ D + D +I + F+ NG Sbjct: 181 TTQLEAYDSLGKKHVIKIFFVKQEAQGNWMVHGYDETSPIVDDSKNIKTNPILISFDENG 240 Query: 235 TLVDGAMAN---NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 L +N +I +++G++P ++ L M Q + N I NG+ G Y Sbjct: 241 NLKKSENSNKYISIDGSSLDGSDPLKVEIN-LEEMTQYSSDNQINYQKINGHGVGKFNDY 299 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 ++D G ++ NYSN QTQL+ QI +ANF NN GL G+N W + SG A++G + TG+ Sbjct: 300 NVSDSGKIIANYSNGQTQLIAQIAMANFTNNLGLTPNGENCWLESAESGPAIIGLSETGS 359 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG ++ LE+SNVD+S ELV M+ Q NYQSNAQTIKTQDQ+L LVN++ Sbjct: 360 FGRISGQKLESSNVDISNELVKMMTQQSNYQSNAQTIKTQDQLLQILVNMK 410 >UniRef50_Q74G30 Flagellar hook protein FlgE n=2 Tax=Geobacter RepID=Q74G30_GEOSL Length = 419 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 140/416 (33%), Positives = 215/416 (51%), Gaps = 18/416 (4%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 A +SGLNA + VIGNNI+N T GFK G F+D+ + GS++G GV++ Sbjct: 6 ALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQT 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 + FT G+ +T G D+AI + FF + +++G +Y+R G F ++++ LVN +G Q+ Sbjct: 66 VENQFTQGSFESTESGTDLAIQGDSFFVVQNTSG-RYYTRAGAFSFNKDKTLVNPEGYQV 124 Query: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 GY + P +++ K T+T +NL+S+ PT+ A+ Sbjct: 125 MGYGIIPSSGLSDGVLKPIDLT-NFATTPPKQTSTVKFVVNLDSTQTTPTLAWDPANPVA 183 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT-----LEFN 231 + N S++V+DSQGNAH +VYF KT DN W + + TT L F+ Sbjct: 184 TSNYSTSLSVYDSQGNAHTATVYFRKTADNAWDWHVILPDAAAGTPGSTTTPIDGTLTFD 243 Query: 232 ANGTLVD-----GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 A G L GA N G + +P F L + + Q ++ + + TQ+GY G Sbjct: 244 ATGALTAQTPLAGAAQNITFAGGVTAPQPIFFDLG-VGATTQYASSSVVSSQTQDGYYQG 302 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 L I+D G V G YSN Q Q L Q+ LA F++ GL+ G ++ T SG L Sbjct: 303 TLTKVTIDDKGYVNGVYSNGQLQKLYQVALAKFSSTAGLSKAGGTLFEETLESGQPLFSD 362 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A T G + +LE SNVD++ + V MI QR Y +N++TI T D++L +++L+ Sbjct: 363 ASTPGVGKILANSLEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLSLK 418 >UniRef50_Q6MHY9 FlgE protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHY9_BDEBA Length = 427 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 128/426 (30%), Positives = 197/426 (46%), Gaps = 30/426 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + VSG+ A L VIG+NIAN+ T GFK+ A F D+ + G+++G GVK Sbjct: 6 SLYTGVSGMTAQGEALGVIGDNIANANTIGFKASRAEFQDIISKNLKGIVGGNQIGRGVK 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + + G T + D+AIS +G+F++ S+G Y+R+G F D LV Sbjct: 66 IGAVNPILSQGNIDATEKVTDLAISGDGYFKVKGSDGE-SYTRDGSFHFDREGYLVTNDN 124 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++ G+ + + T+I P L+ AK T + +NL+S PT A Sbjct: 125 QRVQGFSTDEKGNIVNK---MTDIKFPRALIPAKATKELKLDLNLDSRME-PTKKFDPAD 180 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-------YTQDSSDPNSIAKTAT 226 + + V ++DSQGN H +S +F K D W+ + A Sbjct: 181 PYSTSHYSTGVEMYDSQGNKHLVSFFFNKVNDREWEFKGLVDGKEITGGEEGKMSEVAAG 240 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF----------LNSMQQNTGANNIV 276 L F +G L + + L+F L+ +Q ++++ Sbjct: 241 KLMFTVDGKLDSQETTSTNFNFKGGALQDQQVKLNFGDAIKDGGKGLDGTKQYGKNSDLI 300 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 + Q+G G + ND+GT+ YSN Q L QI LA F N E L G+N + Sbjct: 301 SWHQDGAAAGTITGLSFNDEGTLTAVYSNGQANDLAQIALAKFENPEALFKVGNNRLKES 360 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 + SG A +G G G L +LE S VDL+ E VNMI QR +Q+NA+TI T D++LN Sbjct: 361 RDSGTASVGAPGAAGRGKLFAKSLERSTVDLATEFVNMIQNQRGFQANAKTITTTDELLN 420 Query: 397 TLVNLR 402 ++ L+ Sbjct: 421 EVIQLK 426 >UniRef50_B4UFG1 Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=B4UFG1_ANASK Length = 428 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 27/425 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKVA 55 A S +GL A++ L V+G+NIAN+ T GFKSG A+F D + S ++GLG ++A Sbjct: 6 ALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSRLA 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS---NGSVFYSRNGQFKLDENRNLVNMQ 112 G+ + T G +TG D+A+ NGFF + + FY+R+GQF +D++ LVN++ Sbjct: 66 GVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVNLE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GL++ G+PA P+ P ++ + + TT +++ NL + +PT A Sbjct: 126 GLRVQGFPAD---PSGALAGLPDDLLVGTASAQPRATTRLTLKANLQADAAVPTAAWDPA 182 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT-------A 225 + + N ++TV+D+ G H + VYF KTGD W + + Sbjct: 183 NPGATSNFSTTMTVYDALGAGHAVQVYFRKTGDGAWDWHALTDGAGVAGGTAGQLTQIAG 242 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS--------FLNSMQQNTGANNIVA 277 TL F G L ++ +P FS L + Q + + Sbjct: 243 GTLAFGDGGELTSMTQTSSFTPAGQAAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTF 302 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 Q+GY G L S ++ +G + G ++N QT++LGQ+ +A FA + L G N+ T Sbjct: 303 IGQDGYGSGQLASVRVGPEGVISGVFTNGQTRVLGQVAVAGFAAPDQLDRAGGNLLQQTP 362 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG ++G AG+G ++ G+LE SNVDL+++ V +I AQR +Q+N++TI T DQ+L+ Sbjct: 363 GSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSE 422 Query: 398 LVNLR 402 L+ ++ Sbjct: 423 LIAMK 427 >UniRef50_B5YIG4 Flagellar hook protein FlgE n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIG4_THEYD Length = 434 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 136/433 (31%), Positives = 211/433 (48%), Gaps = 37/433 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKV 54 + +SGLNA L VIG+NIAN+ T GFK+ A+FAD+ + + +VG G + Sbjct: 4 SLFTGISGLNANGLALSVIGDNIANANTVGFKASRANFADILSQTLGGASAMQVGRGTMI 63 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 I + FT GT T LD+AI +GFF + NG +Y+R GQF+++++ +V+ G Sbjct: 64 IDIQKLFTQGTLETTSNPLDLAIEGDGFFVVQQPNGPTYYTRAGQFRVNKDGYIVDPNGY 123 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L Y N+ + + T + Q+NL+S + T + S S Sbjct: 124 LLQAYQMD---VNGNVTGAIGNVYLAGLMSDPSATDLITTQVNLDSREDTTTWSFTSGST 180 Query: 175 ---ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----------QDSSDPNSI 221 A +YN ++T++DSQGN H + YF KT N W+ + D +S Sbjct: 181 LPVAGTYNYSTAITIYDSQGNPHLVYTYFCKTAANTWEAHVVYNNSATGTNYVEVDFDSG 240 Query: 222 AKTATTLEFNANGTLVD-------------GAMANNIATGAINGAEPATFSLSFLNSMQQ 268 T+ F++NG L D + + P + NS Q Sbjct: 241 TTQPVTIAFDSNGALSDVYVTTPHTPPDPTFRPTAALDFSSWGVTSPQNVDIDLNNS-TQ 299 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 +N +V QNGY G+L++ ++ DG + G ++N Q + + Q+VLA F L Sbjct: 300 YGSSNAVVFQNQNGYSAGNLIAVTVDQDGVISGVFTNGQVKKVAQVVLAKFVAAHNLTKV 359 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G+N++ + +SG G GT G + +LEASNVDL++E + MI AQR YQ+N + I Sbjct: 360 GNNLYLESYASGGPTYGAPGTVGVGKVYANSLEASNVDLAEEFIRMIAAQRAYQANVRVI 419 Query: 389 KTQDQILNTLVNL 401 T D +LN L+N+ Sbjct: 420 TTTDNMLNELMNI 432 >UniRef50_A1K948 FlgE protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K948_AZOSB Length = 445 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 185/445 (41%), Positives = 255/445 (57%), Gaps = 43/445 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 MAF Q +SGLN+++ LDVI NN+AN++T GFK+ FADM+A + +VG+G Sbjct: 1 MAFQQGLSGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGS 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 KVA +TQ FT G T T LD+AI+ NGFFRL S+GS+ YSRNGQF +D N N+VN Sbjct: 61 KVAAVTQSFTQGNLTATNNPLDMAINGNGFFRLSRSDGSIAYSRNGQFDVDRNGNIVNAT 120 Query: 113 GLQLTGYPA-TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G +LTG+ A + P+ I I T +A + T TAS+ +NL+SS+ P Sbjct: 121 GEKLTGFQALDTSGTQTVFSGEPSVIYIDTTNIAPRETGTASVGVNLDSSEKNPLNKNPV 180 Query: 172 ASNADS-----------YNKKGSVTVFDSQGNAHDMSVYFVKTGD------NNWQVY--- 211 S+ ++ YN S+TV+DS GNA M++YFV+ D N W VY Sbjct: 181 GSDINNFLNYTAIPVESYNYTTSMTVYDSLGNASLMNLYFVRDPDVAGVSPNTWTVYGRL 240 Query: 212 ----TQDSSDPNSIAKTA----TTLEFNANG----TLVDGAMANNIATGAI--NGAEPAT 257 D +DP T+ F G T+ + N TGA GA+ Sbjct: 241 SNDVVPDPADPALSTGAPLENLGTITFTNLGVPDSTIAGNGVFNVTRTGAQLGTGADDLN 300 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 F+L S Q NT + + Q+GY G L +++ G V G +SN Q + + ++ LA Sbjct: 301 FTLDLSRSTQWNTDSGVTTSPRQDGYTTGRLTGLSVSNTGVVQGTFSNGQVRDIARLALA 360 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 NF++ +GL S GDN+W+ + SG +G GTG G++T G +E SNVDL++ELV+MIV Sbjct: 361 NFSSPQGLTSLGDNLWAESFESGQPTVGAPGTGVLGSVTAGQIEESNVDLTQELVSMIVQ 420 Query: 378 QRNYQSNAQTIKTQDQILNTLVNLR 402 QRNYQ+NAQ+I+TQDQIL TLVNLR Sbjct: 421 QRNYQANAQSIRTQDQILQTLVNLR 445 >UniRef50_B2AI79 FlgE: Flagellar hook protein n=6 Tax=Betaproteobacteria RepID=B2AI79_CUPTR Length = 414 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 198/420 (47%), Positives = 258/420 (61%), Gaps = 25/420 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q VSGLNAAA+NLDVIGNNIAN+ T G+K A FAD++AG+K+GLGV+V + Q Sbjct: 1 MGFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYAGTKIGLGVRVNSVVQS 60 Query: 61 FTDGTTTNTGRGLDVAI-SQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F G +GR LDVAI + NGFFRL G+V+YSRNGQF+ E+ + NMQGLQ+TGY Sbjct: 61 FNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQVTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF----SASNA 175 PA G P + I N M + T++ + + L+S +PT S + Sbjct: 121 PA---GVAGGAGVQPQPLVISNAQMEPRATSSITAKFQLDSRATVPTQAFASSAGSPPTS 177 Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN-------------NWQVYTQDSSDPNSIA 222 + +N ++ V+DS GN + YF K D+ +WQ+Y D + N++ Sbjct: 178 NMFNYSTAINVYDSLGNKQQLMAYFAKVADSAVAPVHPTVAGGTDWQMYVTDV-NGNAVG 236 Query: 223 KTATTLEFNANGTLVDGAM-ANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 TL F+ G L A A + A+NGA+ L L+ Q N++ +QN Sbjct: 237 GAPVTLAFDNAGALQSPAAGAVTLTQPAVNGAQAMAMKLD-LSGTTQFGADNDVKQLSQN 295 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 GY G L+ + +N DGT+ GNYSNEQT+ LGQIV+A F N EGL EGDNVWSAT SSG Sbjct: 296 GYTSGSLLGFSVNGDGTITGNYSNEQTKPLGQIVMAAFGNVEGLKPEGDNVWSATGSSGQ 355 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LLG AG G+ GTL + A+EASNVDLS +LVN+IVAQRNYQ+NAQTIK QD ++ TLVNL Sbjct: 356 PLLGVAG-GSLGTLRSNAVEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 414 >UniRef50_A4G6B1 Flagellar hook protein FlgE n=8 Tax=Betaproteobacteria RepID=A4G6B1_HERAR Length = 418 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 152/422 (36%), Positives = 231/422 (54%), Gaps = 24/422 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLNAA+ +L+ IGNN+ANS T GFK FAD++A + ++G+G + Sbjct: 1 MSFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGTQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q F+ G T + LD+AI+ +GFFR+ S G++ Y+RNGQF+L + + + G Sbjct: 61 IARVAQLFSQGNITASNNPLDMAINGDGFFRMS-SGGTISYARNGQFELSKEGFIQSASG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTGY A + P + I +A + TT +++ L+S + F+ Sbjct: 120 ARLTGYMADANG--VVAIGAPAELKINKADLAPEATTKYELKLTLDSRKNVLNSANFNPD 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP----------NSIAK 223 + ++N SV V+DS GN+H + ++VKT W V+ + P + Sbjct: 178 DPTTFNDSTSVPVYDSLGNSHILRTFYVKTAGGEWDVFATNDGVPIGYDPAAVPPANAPV 237 Query: 224 TATTLEFNANGTLVDGAMANNIATG---AINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 T++F G L+ + + P + QQ + + Sbjct: 238 ALGTMQFGPGGVLIPSIPPTPLVVPMDVSTGATTPFNIVIDH-TGTQQFAQSFGVNKQLP 296 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +G+ PG L ++ + DG++VG YSN + +LGQ++L++FAN GL + GDN W T SG Sbjct: 297 DGFPPGTLTAFNVASDGSIVGRYSNGKVNVLGQVILSSFANPNGLQNIGDNQWVETAESG 356 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 VAL G+ G++ + +E SNVDL+ ELVNMI AQR YQ+NAQTIKTQDQIL TLVN Sbjct: 357 VALTSAPGSSGLGSVQSARIEESNVDLTAELVNMITAQRYYQANAQTIKTQDQILQTLVN 416 Query: 401 LR 402 LR Sbjct: 417 LR 418 >UniRef50_Q0AA87 Flagellar basal body FlaE domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AA87_ALHEH Length = 430 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 150/437 (34%), Positives = 232/437 (53%), Gaps = 42/437 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F +++GLNAA + L++ G+NIANS+T+GFK FAD+FA S +G GV+ Sbjct: 1 MSFGTSLTGLNAAQSELNITGDNIANSSTWGFKESRPEFADLFASSNLGVTGLAIGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + Q F+ G T LD+ IS GFFRL D +G + Y+R+G F+LD + N G Sbjct: 61 LQNVGQQFSQGQFDFTENSLDLGISGKGFFRLSD-DGDISYTRSGAFQLDREGWITNSAG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTG+ A G + G + + +A + TT A +Q NLN+ +P A Sbjct: 120 KRLTGFAADGDGNIVGDGQQ--ELRVETGNVAPEATTEARIQANLNAGAEIPPAYTLDAD 177 Query: 174 N----------------------------ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD 205 + ++N+ S T FDS G H + YF+K D Sbjct: 178 DRLADFDQLEWVGPDENNPVPGAVFDPRDTATFNESTSTTFFDSLGRQHTANFYFIKGND 237 Query: 206 NNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS 265 N+W V+T+ + + + F NG + A T A+ AE F L L S Sbjct: 238 NDWYVHTEVDGEVLN-NGQPQPISFGPNG--LIEGNATFDYTRALADAEDLDFELD-LES 293 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 + Q + TQ+G+ G+ S +++DGT+ ++N Q+++LG++ + F + E L Sbjct: 294 LTQFGTPFAVSDITQDGFAAGEFSSLDVSEDGTIFARFTNGQSEVLGRVGVTKFPSQENL 353 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 GD W AT +G ++GTAGT +FG++ +GALE SNVD+S++LV MIVAQRN+ +NA Sbjct: 354 QPVGDTEWVATFEAGEPVVGTAGTSDFGSIESGALEQSNVDISEQLVKMIVAQRNFSANA 413 Query: 386 QTIKTQDQILNTLVNLR 402 + I T+DQI ++N+R Sbjct: 414 KMISTEDQITQEILNIR 430 >UniRef50_B7R866 Flagellar basal body protein FlgE n=10 Tax=Thermoanaerobacteraceae RepID=B7R866_9THEO Length = 415 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 134/425 (31%), Positives = 212/425 (49%), Gaps = 38/425 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL A LDVIGNNIAN T G+K+ +F ++F+ + Sbjct: 4 SMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLGV +A I FT G T D++I NGFF + + S+ Y+R G F D Sbjct: 64 PQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGE-SILYTRAGNFSFDS 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSDP 163 N +LV G ++ G+ +T N IS+ N M TTT + NLN+S Sbjct: 123 NGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWFGMEPSTTTQLEIGGNLNASTG 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--NWQVYTQDSSDPNSI 221 + + ++ V+D+QG +H ++ F + N NW V +QD + Sbjct: 183 IGQ------------SISYNIIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVS 230 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAIN----GAEPATFSLSFLNSMQQNTGANNIVA 277 +T + F A+G + A T +N A+ ++ L+ + + ++ Sbjct: 231 VAGSTAITFGADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNID-LSKLTMFSTETDLRE 289 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 ++NG + G L S I+ G V G YSN + Q++GQI LA+F N GL G+ ++ T Sbjct: 290 LSKNGNEAGSLQSINIDKYGVVSGIYSNGRRQVIGQIALADFQNPMGLEKVGNTMFINTV 349 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 +SG ++G AG+G G++ G LE SNV+L+ E V+MI QR +Q+NA+ I D++L Sbjct: 350 NSGEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVITVSDEMLQD 409 Query: 398 LVNLR 402 LVN++ Sbjct: 410 LVNMK 414 >UniRef50_C4KAU4 Flagellar basal body FlaE domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4KAU4_THASP Length = 450 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 156/451 (34%), Positives = 230/451 (50%), Gaps = 50/451 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGV 52 M+F Q +SGL+ ++ LD+I NN+AN+ T GFK+G+A F+D+FA G +VG+G Sbjct: 1 MSFQQGLSGLSVSSKALDIISNNVANTNTIGFKTGSAIFSDVFAASLTGSISGKQVGVGA 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + + Q FT G T T LD+AI+ +GFF + NG Y+RNGQF+LD+ + Sbjct: 61 TLGAVRQTFTQGNLTTTNNPLDLAINGDGFFVVSRENGPDVYTRNGQFELDKEGFIRTPT 120 Query: 113 GLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSD--------- 162 G +L G+ + TP + ++ +P T+ + NL+++D Sbjct: 121 GERLKGFQSPVTPGALPTPIGGLKDVQVPIVGSQPMPTSRVEIGGNLDANDLSAAQRYPQ 180 Query: 163 ------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF----------VKTGDN 206 P + +A +YN S+ +DS G +H+++ YF V T +N Sbjct: 181 LFGSTFTFPLPAGENWQDARTYNFSTSIKAYDSLGKSHELTYYFAKVTPTPNDPVNTNEN 240 Query: 207 NWQVYTQ-DSSDPNSIAKTA--------TTLEFNANGTL------VDGAMANNIATGAIN 251 W+V+T D P + +L FN GT+ A I Sbjct: 241 TWKVFTSVDGGYPLGVGTDGSIEDPSVIWSLTFNEKGTVNTPIVGPTAANPLAIPASYTP 300 Query: 252 GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 GA+ F + F + M+Q G+ I TQ+GY G+L + DG V G Y+N +T+ L Sbjct: 301 GADRIRFHVDFSD-MRQIGGSYLITELTQDGYTGGELAGVSVGRDGIVTGRYTNGETREL 359 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 Q+ L F N L S G+N W AT SG+ AG G G ++ G +E +NV+L+ EL Sbjct: 360 AQLALQTFRNPNALLSIGNNFWEATTESGLTAPSKAGEGVAGVVSAGMIEDANVELTNEL 419 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 V MIV QRNYQ+NAQ+IK QDQ+L TLVNLR Sbjct: 420 VQMIVQQRNYQANAQSIKAQDQVLQTLVNLR 450 >UniRef50_B9MM16 Putative uncharacterized protein n=2 Tax=Clostridia RepID=B9MM16_ANATD Length = 488 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 143/484 (29%), Positives = 213/484 (44%), Gaps = 83/484 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++S L A T +DVIG+NIAN T GFKS +FA +FA Sbjct: 4 SMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASGRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 ++GLGV VA + + T G+ T D+AI +GFF + + ++R G F L Sbjct: 64 SNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGNFSL 123 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSS 161 D+ NLV GL + G+ I +P+ I+I + K T S NL++ Sbjct: 124 DKMGNLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNLSAD 183 Query: 162 DPLPTVTPFSASN----ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ-------- 209 + + + S +FDSQG H + + F+KTGDN W+ Sbjct: 184 TKIYSGQITKFEDLLNVPADSKYSTSFKIFDSQGKEHTLQLTFIKTGDNTWEWFVDAPRV 243 Query: 210 --------------VYTQDSSDPNSIAKTA---TTLEFNANGTLVDGAMANN-----IAT 247 VY D + N+ T+ F G ++D + I Sbjct: 244 KKNIGTAQNPQEAYVYVDDMIEANNDYDNFIARGTITFGQAGKVLDDENTPDVEGIAITG 303 Query: 248 GAINGAEPATFSLSFLNS-----------------------------MQQNTGANNIVAT 278 G + TF+++F N+ Q ++I Sbjct: 304 GRFINTQNGTFTINFKNNVVNPVTLKVNSSQFDVNDATNIAFFLKNITQFGNMESSIRVA 363 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 GY G L + ++ G + G YSN QL+GQI +A FAN GL GDN++ T + Sbjct: 364 QMTGYSAGSLQGFNVDASGKITGVYSNGLNQLIGQIAIATFANPAGLQRIGDNLYINTVN 423 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG +GT G+G+ GT++ G LE SNVDL+KE +MIV QR YQ+NA+ I D++L L Sbjct: 424 SGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDL 483 Query: 399 VNLR 402 VN++ Sbjct: 484 VNIK 487 >UniRef50_D1NM00 Fagellar hook-basal body protein n=5 Tax=Clostridium RepID=D1NM00_CLOTM Length = 440 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 142/439 (32%), Positives = 216/439 (49%), Gaps = 41/439 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A T +DVIGNN+AN T GFKS +F ++F+ + Sbjct: 4 SMFSGVSGLQAHQTKMDVIGNNVANVNTVGFKSSRVTFQEVFSQTLKGASSPDPTTGRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFK 101 +VGLG+ VA I T G+ T D+AI +GFF + + F ++R G F Sbjct: 64 TNPMQVGLGLGVATIDTLMTRGSVQRTDNPTDLAIEGDGFFIVKGGSSDTFKFTRAGNFG 123 Query: 102 LDENRNLVNMQGLQLTGY------PATGTPPTIQQGANPTNISIPN-----TLMAAKTTT 150 +D NLV GL + G+ P + P N+ + ++AAK TT Sbjct: 124 IDRLGNLVTGSGLNVYGWQSYTKLPDGTYKFDTESQIEPINLYSDDVNKNKRMIAAKATT 183 Query: 151 TASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT---GDNN 207 A + NL++S + + S+ + + VTV+DS GN++ +++ F KT G Sbjct: 184 YAIFEGNLDASYSIYSSAASGTSSNNRFTMP--VTVYDSLGNSYKINISFWKTDVTGGVT 241 Query: 208 WQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGA---EPATFSLSFLN 264 + DS + + + T+ F+ G +++ + T + + + L F Sbjct: 242 TWTWQVDSGNGVTASGATGTILFDDQGQVIESSAVTPSITIIPDSSVGSQNINVKLDFSR 301 Query: 265 SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 + ++ AT +GY G LV++ I DG ++G YSN Q Q LG I LA+F N G Sbjct: 302 -LTMYAADSSAKATNVDGYPAGSLVTFSIGSDGMIMGIYSNGQQQPLGLIALASFDNPAG 360 Query: 325 LASEGDNVWSATQSSGVALLGT-AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 L G+N++ T +SG G AGT GTL+ G LE SNVDLSKE MI+ QR +Q+ Sbjct: 361 LEKVGENMYIPTSNSGEFKKGVKAGTEGVGTLSPGTLEMSNVDLSKEFTEMIITQRGFQA 420 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ I T D++L LVNL+ Sbjct: 421 NSRIITTSDEMLQELVNLK 439 >UniRef50_A1WUE2 Flagellar basal body FlaE domain protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUE2_HALHL Length = 418 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 144/422 (34%), Positives = 229/422 (54%), Gaps = 24/422 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F+ +++G+N+A+ +L+ NN+AN+ T GFK A F D+FA VG G + Sbjct: 1 MSFNISLTGINSASKDLETTSNNLANAGTTGFKESRAEFNDLFAMGPMGIPQLAVGQGSR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q F+ G+ T R LD+ I GFFR+ D +G V Y+R GQF++D + +VN G Sbjct: 61 LANVGQMFSQGSFDFTERSLDLGIEGRGFFRMED-DGEVSYTRAGQFEVDRDGYIVNNTG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS-DPLPTVTPFSA 172 +LTG+ I G + + +P + A+ + + NL++ D + F Sbjct: 120 KRLTGFQTDEDGSRIGDGRD--QLQLPTDGIPARASENVEIAANLSADADVIDEGVAFDP 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS------DPNSIAKTAT 226 + +++ + + T++DSQG+A D + YF K G+N W VYTQ D Sbjct: 178 DDNETFTESTTTTLYDSQGSARDATFYFRKVGNNEWDVYTQVDGVDYEQADTEGDYFGPH 237 Query: 227 TLEFNANGTLVD------GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 L F+ +G+LVD G +A+ + + + F M Q N+ +Q Sbjct: 238 RLSFDTSGSLVDAEGDDEGRIASLEDVPLLAEVDDLDLDIDF-GEMTQFARPFNVTNVSQ 296 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +GY G+ + + DGT++ YSN + Q +GQ+ L +F + E L S G+ W AT+ +G Sbjct: 297 DGYAAGEFENINVEGDGTILARYSNGEAQAVGQVALTSFPSEEKLQSVGETSWQATRDAG 356 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 L+G G G FG + NGALE SNV++S +LVNMI AQRN+ +NAQ + TQDQ+ ++N Sbjct: 357 DPLIGVPGQGQFGRVENGALEQSNVEVSDQLVNMITAQRNFSANAQMVSTQDQVTQEILN 416 Query: 401 LR 402 +R Sbjct: 417 IR 418 >UniRef50_Q04UG8 Endoflagellar hook protein n=7 Tax=Spirochaetales RepID=Q04UG8_LEPBJ Length = 464 Score = 333 bits (854), Expect = 6e-90, Method: Composition-based stats. Identities = 139/461 (30%), Positives = 207/461 (44%), Gaps = 61/461 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL +DVIGNNI+N T+GFK+ +F DM + Sbjct: 4 SLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG +A I + T G+ TG+ DVA+S GFF + D + FY+R G F LD+ Sbjct: 64 PQQVGLGSLIAAIDKIMTQGSLQTTGKNTDVAMSGEGFFIVKDGD-KQFYTRAGAFNLDK 122 Query: 105 NRNLVN-MQGLQLTGYPA---TGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLN 159 N VN GL++ G+ A I A+ +I IP + A+ T+ + NLN Sbjct: 123 NGYYVNPANGLKVQGWNARLDDKGNKFINSSASIEDIIIPVYSKEPARATSQIDFKSNLN 182 Query: 160 SSDPLPTVTPFSASNADSYN---------KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV 210 SS P N ++ FD QG + + F K DN W+ Sbjct: 183 SSAPAVPPDATQEEITAMINDPDPKMRRGHVTTIKTFDDQGIQREFKMEFYKVRDNTWKA 242 Query: 211 Y------TQDSSDPNSIAKTATTLE--------FNANGTLV----------DGAMANNIA 246 TQ S+D + T L F +G LV G + ++ Sbjct: 243 RLSMTDATQLSADVSGTGGQNTQLPGNTELEFGFTPDGKLVYVSDGVDSMNSGKLNAKVS 302 Query: 247 TGAINGAEPATFSLSF-----LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 +F L+ ++ + Q + A Q+GY G L S+ I++ GT+ G Sbjct: 303 FRIAGNPAVQSFDLNLGEAGMVDGITQFSSDFTTKAVKQDGYTMGYLESFSIDNSGTITG 362 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 +SN Q L +I A F N GL GD +++ + +SG +G AG G + G LE Sbjct: 363 VFSNGVRQPLARIATAVFNNPAGLDKAGDTMFAYSMNSGEPNIGEAGVQGRGKINAGLLE 422 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS + +MIV QR +Q+N++TI T DQ++ ++ L+ Sbjct: 423 MSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQEVLGLK 463 >UniRef50_Q0AJ53 Flagellar basal body FlaE domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AJ53_NITEC Length = 419 Score = 333 bits (853), Expect = 9e-90, Method: Composition-based stats. Identities = 152/426 (35%), Positives = 232/426 (54%), Gaps = 32/426 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M F +SGL AA+ LDV GNNIAN+ T GFK A F+D+FA S ++G+G +V Sbjct: 1 MGFQHGLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFSDVFANSLGGGKNQIGIGTQV 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 A I Q+F G T++ LDVAI+ NGFFR ++NG++ Y+RNGQF LD++ LVN Sbjct: 61 AAIAQEFAQGNVTSSDNPLDVAITGNGFFR-TNNNGTISYTRNGQFHLDKDGFLVNANSY 119 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 +TG+ A + I P N+ +P + + K T + +NL++ + +V F A+N Sbjct: 120 NVTGFAADASGQIIPNI--PVNLRLPTSDLTPKPTANFATGVNLDARTSVTSVA-FDANN 176 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANG 234 +Y S +FDS GN+H ++++F KT W V+ ++ + F G Sbjct: 177 PLTYAHSTSGEIFDSLGNSHILNLFFQKTNSTEWGVFATVDGAVDTTNGLPLGVTFGGGG 236 Query: 235 TLVDGAMANNIATGAINGAEPATFSLSF-------------------LNSMQQNTGANNI 275 + +N I T P ++ F L Q + Sbjct: 237 STSLTFDSNGIMTTP---TGPIDVTVDFQAIDATKWGAIPDLTFSFDLTRSTQFGNKFGV 293 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 Q+G+ G L Y I+D+G + G+Y+N T+ LGQ+ LA F+N GL G+N W+ Sbjct: 294 NMMNQDGFTSGRLAGYSISDNGEIRGSYTNGVTRTLGQLALAGFSNPNGLKPMGNNQWAE 353 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG+ L+GT TG G+L + A+E SNVDL+ ELV++I+ QR YQ+NA+TI+TQD ++ Sbjct: 354 TAESGLPLIGTPETGVLGSLQSSAVEESNVDLTSELVSLIMTQRVYQANAKTIQTQDAVM 413 Query: 396 NTLVNL 401 +++N+ Sbjct: 414 QSIMNI 419 >UniRef50_A1HN32 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN32_9FIRM Length = 420 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 136/429 (31%), Positives = 204/429 (47%), Gaps = 41/429 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DVIGNNIAN T GFK+ +F D+ + + Sbjct: 4 SLFAGVSGLRNHQTRMDVIGNNIANVNTIGFKASRVNFQDILSQTMQGASSGIGNQGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLD 103 ++GLGV +A I FTDG+ TG+ D++I GFF L G ++R G F D Sbjct: 64 PIQIGLGVSIASIDTIFTDGSFQPTGKQTDLSIQGKGFFVLSPDGGKTEVFTRAGNFDFD 123 Query: 104 ENRN-LVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSS 161 N +V G ++ G+ A + T I IP T M A+ T + NL++ Sbjct: 124 RLGNFIVPGTGYKVVGWKADSNGNIDTDPSKRTTIDIPVGTQMPAQATKAITFANNLSAD 183 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 A+ K S ++D+ G + + V F KTGD W ++S+ Sbjct: 184 A------------ANGTTVKVSYDIYDNLGKRYTLPVVFTKTGDTTWDYTISNTSEYTVA 231 Query: 222 AKTATT----LEFNANGTLVDGAMANNIATGAINGAEPAT----FSLSFLNSMQQNTGAN 273 AT+ L F+A + + T I+ PA L F + + Q G Sbjct: 232 TLPATSVTGRLTFDAATGKLSSTTPPTVTTIDISYTTPAQKVSGIQLKF-DQVTQYGGDT 290 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 + Q+GY PG L I+ +G +VG +SN +T+ L Q+ LA F N GL GD+++ Sbjct: 291 TLQIVDQDGYPPGSLEGVTIDPNGVIVGRFSNGKTRNLAQVALATFNNPAGLTKIGDSLY 350 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 + + +SG +G G+G G L G LE SNVDL++E NMI+ QR +Q+N++ I D+ Sbjct: 351 AVSSNSGTPEIGVTGSGGRGKLNPGTLEMSNVDLAQEFSNMIITQRGFQANSKIISVTDE 410 Query: 394 ILNTLVNLR 402 +L L NL+ Sbjct: 411 MLQELANLK 419 >UniRef50_B0RT16 Complete genome, strain B100 n=13 Tax=Xanthomonadaceae RepID=B0RT16_XANCB Length = 407 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 154/412 (37%), Positives = 229/412 (55%), Gaps = 15/412 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 MAF+ ++SG+NAA +L+V NNIAN T GFK A FADMF + VG GV+ Sbjct: 1 MAFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ + Q F+ G TGR LD+AIS GFF + SNG+ Y+R G F+ D N ++N QG Sbjct: 61 VSNVAQQFSQGNIDPTGRSLDLAISGEGFFAVS-SNGAKMYTRAGNFQTDANGYVINPQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L + + G +++ + T K+T+T ++ L + PTVTPF+ + Sbjct: 120 ARLQVFAPNPSGNGFDVG-RLSDLQLLTTDSPPKSTSTVNLAFTLPGNASAPTVTPFNPA 178 Query: 174 NADSYNKKGS-VTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQDSSDPNSIAKTATTLEFN 231 + +Y+ + V+DS G +H + YFVKT + N WQV+ S TTL+F+ Sbjct: 179 DDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDG---SAVGAPTTLQFS 235 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSF-LNSMQQNTGANNIVATTQNGYKPGDLVS 290 G+L A S+ ++ Q A + T Q+GY G L Sbjct: 236 DTGSLTTPANGIVAMDPFTPSTGAGVLSMQLNVSGSTQYGEAFALRDTRQDGYASGKLNE 295 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 I+ G V YSN + LGQ+ L +F N +GL S+G+N+W+ + +SG A +G T Sbjct: 296 ISIDTSGVVFARYSNGADKALGQVALNSFVNPQGLQSQGNNMWAESYTSGAARVGAPDTS 355 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + G + +G+LEAS VDL+++LVNMIVAQRN+Q+N+Q I TQDQ+ T++N+R Sbjct: 356 DLGQIESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINIR 407 >UniRef50_A8VS11 DNA topoisomerase I n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS11_9BACI Length = 424 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 133/435 (30%), Positives = 204/435 (46%), Gaps = 49/435 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + + G+N T LDVIGNNI+N T+GFK G +F D+ + Sbjct: 4 SLYSGIGGMNNFQTKLDVIGNNISNVNTFGFKKGRVTFNDLVSQQLAGASSPQEGERGGT 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 +VGLG A I T G+ +TGR LD+AIS +GFF++ D G FY+R G F LD Sbjct: 64 NPRQVGLGGSTASIDTINTQGSLQSTGRDLDMAISGDGFFQVAD-GGQNFYTRAGNFYLD 122 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 EN LVN GL+L GY G I + A ++ IP + + T+ ++ NLN+ Sbjct: 123 ENGMLVNADGLRLQGYGV-GDDGAIDEAAGVGDLFIPAGEQVDPEATSQVDLRGNLNADS 181 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNW----QVYTQDSSDP 218 + + + D G ++ + KT +N W + + D D Sbjct: 182 EIGEE------------RTVRFFITDPLGGEQEIRLLMTKTAENEWDYSLEYWDNDIEDW 229 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIA-----------TGAINGAEPATFSLSFLNSMQ 267 + + + N+ G + +L+ N + Sbjct: 230 DILPDIGQGFFDFSGTEDGVSRGRMNLDNLELIVEDLGFIGGPWEGHEGSLNLNLSN-VT 288 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 Q + + + ++NG G L SY +++ G + G +SN + +LLGQ+ L NF N GL+ Sbjct: 289 QFSSRSTVEVESRNGSSDGTLESYTVSETGEINGIFSNGEVRLLGQVALVNFNNPSGLSK 348 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 G N++ + +SG +G AG G G+L LE SNVDLS+E MIV+QR +Q+N + Sbjct: 349 AGSNLFEVSNNSGEPQVGLAGIGGRGSLVGATLEMSNVDLSEEFAEMIVSQRGFQANTRM 408 Query: 388 IKTQDQILNTLVNLR 402 I T D+IL L+NL+ Sbjct: 409 ITTSDEILQELINLK 423 >UniRef50_Q3A5C5 Flagellar biosynthesis, hook protein n=2 Tax=Desulfuromonadales RepID=Q3A5C5_PELCD Length = 413 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 137/413 (33%), Positives = 213/413 (51%), Gaps = 18/413 (4%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +SG+N T + VIGNNIAN+ T GFKS F+D+ A S +VG G Sbjct: 6 ALYSGISGMNTNGTAMSVIGNNIANTNTVGFKSSRTVFSDLLASSVNGSGGASQVGRGTG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQ 112 ++ + F+ GT T D+AI G F + + ++Y+R G F D L N + Sbjct: 66 LSTVDNLFSQGTFETTESQTDLAIEGEGLFVVREEGAESLYYTRAGSFSFDGEGFLTNAE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G ++ G + A+ T+I + N + AK T ++ NL++++P+ F Sbjct: 126 GYRVQG---KTYVNGVLSSADATDIMVDINAGIEAKMTDKITLSTNLDANEPV-ITAAFD 181 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN--SIAKTATTLE 229 ++ +YN S T++DS GN H M+ YF+K+ DN W D +D S A +LE Sbjct: 182 PNDTTTYNYSNSTTIYDSLGNTHLMTTYFIKSDDNTWDWNVVDENDATLYSSATAGNSLE 241 Query: 230 FNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 F+ +G + G A G T + + N Q + +++ TQNGY G+L Sbjct: 242 FDTSGKQISGGTATLGPLTPGAGTASQTINFALKN-TTQFANDSQVISQTQNGYGAGNLT 300 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 + I+++G V+ YSN + +IVLA F++ GL EG +++SAT SG +G GT Sbjct: 301 NISIDNEGNVLAKYSNGEEIAKSRIVLAKFSSFSGLRKEGASLFSATGESGPPRIGVPGT 360 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + ALE S VDL+ E V MI QR +Q+N++ I T D++L+ L+NL+ Sbjct: 361 E-LGNIFTNALEQSTVDLAAEFVKMITTQRGFQANSKVITTTDEMLSELINLK 412 >UniRef50_A8MHE5 Putative uncharacterized protein n=2 Tax=Alkaliphilus RepID=A8MHE5_ALKOO Length = 448 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 137/448 (30%), Positives = 216/448 (48%), Gaps = 51/448 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVS L A +DVIGNNIAN T GFK +F ++F+ + Sbjct: 4 SMYSAVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVTFQEVFSQTLRGAGRAQEGGRGGT 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFK 101 +VGLG+ V + T G+ +TG D+ I+ GFF + D+ G + Y+R G F Sbjct: 64 NPQQVGLGINVNSMDTFHTRGSVESTGYNTDLMINGEGFFVVSDTQGGLQKSYTRAGAFG 123 Query: 102 LDENRNLVNMQGLQLTGY----PATGTPPTIQQG-----ANPTNISIP-NTLMAAKTTTT 151 LD N NL+ G + GY A G ++G N T + I + TT Sbjct: 124 LDANGNLITPDGYYVLGYTAVRDADGQVQKNEKGQPIFEENLTGLRISRDETAPPAATTK 183 Query: 152 ASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT--GDNNWQ 209 A+ N++S+ + + D + + V DS GNAH + V F +T G++ + Sbjct: 184 ATFTGNIDSNLSAD----STGTAGDGGIHETVMKVHDSLGNAHTVKVQFQRTDQGNDTKR 239 Query: 210 VYTQDSSDPNSIA-------KTATTLEFNANG-----TLVDGAMANNIATGAINGAEPAT 257 + ++ +++ + AT L F++ G L G + AT ++GA+ + Sbjct: 240 TFAVTITELDNVKLGAPIPLEPATPLTFDSAGILDKTALTKGTLKLGHATDGLDGAKQLS 299 Query: 258 FSLSFLNSMQQNT---GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 L F ++ A NGY G + + I+ G + N++N Q+LG++ Sbjct: 300 IELDFTKLTSYAADKGAKSDAAALEINGYASGKIDDFTISTTGEIEANFTNGSRQILGRV 359 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 LANF N GL G N++ T +SG + G AGTG FG L GA+E SNVD+S+E +M Sbjct: 360 GLANFKNPAGLLKTGGNMYRETSNSGEVMFGYAGTGGFGALNPGAIEMSNVDISREFTDM 419 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNLR 402 I QR +Q+N++ I T D++L +VN++ Sbjct: 420 ITTQRGFQANSRIITTSDEMLQEIVNMK 447 >UniRef50_A1WFE3 Flagellar basal body FlaE domain protein n=7 Tax=Comamonadaceae RepID=A1WFE3_VEREI Length = 426 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 163/427 (38%), Positives = 233/427 (54%), Gaps = 26/427 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGLNAA+ +LDVIG+N+AN+ T GFKSG A FA+M A + G+GV Sbjct: 1 MGFQQGLSGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVD 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 VA ++Q F G+ T TG LDVAI+ GFF L +G+ Y+R+G FKLD++ N++ Sbjct: 61 VAAVSQQFGQGSLTITGNNLDVAINGAGFFTLTLPDGTPAYTRSGNFKLDKDGNMITNDA 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLM-AAKTTTTASMQINLNSSDPLP---TVTP 169 ++ GYP ++ GA P + P + AK T T + NL++ P Sbjct: 121 ARVMGYPVD-PATGLRTGAEPVGMVFPTSAPIPAKQTGTITAAFNLDARAPDAAGNPAAQ 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQ---DSSDPNSIAKTA 225 S+ V+DSQG A +++YF KT N W VY + + P A Sbjct: 180 PPVPATPRTTYGTSINVYDSQGVAKPVNLYFQKTATANTWAVYDRLDDPGATPPVQAMPI 239 Query: 226 TTLEFNANGTLVDGAMA---------NNIATGAINGAEPATFSLSF-LNSMQQNTGANNI 275 + F+ +G + A I N +++ L+ + Q + Sbjct: 240 GQITFDNDGKITGPAAPAPATGFALPLTIDPTPPNPNGLPAYTVQLKLDGVTQFGTRFAV 299 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + +Q+GY G+L I +G ++ YSN T+ GQ+ L+ N +GLA+ G N W A Sbjct: 300 SSLSQDGYTVGELAGIDIESNGMLMTRYSNGVTRSEGQLALSRIRNAQGLAAVGSNNWVA 359 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T +SG A++GTA GNFG L +GALE SNVDL+ ELVNM+ AQR YQ+NAQT+KTQDQ++ Sbjct: 360 THASGPAVVGTASDGNFGALRSGALEDSNVDLTAELVNMMTAQRTYQANAQTVKTQDQVM 419 Query: 396 NTLVNLR 402 +TLVNLR Sbjct: 420 STLVNLR 426 >UniRef50_B9Z359 Flagellar basal body FlaE domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z359_9NEIS Length = 419 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 165/421 (39%), Positives = 232/421 (55%), Gaps = 21/421 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M F Q +SGL AA+ L+V+GNN+AN++T GFK + FADM+ + ++ G+GV+ Sbjct: 1 MGFQQGLSGLAAASKQLEVVGNNVANASTNGFKRSRSEFADMYGSSLYGVSNAQAGIGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG---SVFYSRNGQFKLDENRNLVN 110 A ++Q F G +TG LD+AIS GFF L + YSRNG F++D N LVN Sbjct: 61 TAEVSQLFDQGNINSTGNNLDLAISGKGFFVLKSPSAASSQDAYSRNGAFQVDANGYLVN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD-PLPTVTP 169 G +L GY A IQ A P ++ +L++ T+ + +NLNSS + Sbjct: 121 GDGYKLQGYAA--QNGVIQYTATPVDLQFQTSLISPTATSNVDLGVNLNSSAMVISPTPT 178 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN----NWQVYTQDSSDPNSIAKTA 225 + ++ +YN SV V+DS GN HD+S YFVK +W V + Sbjct: 179 VNPTDTSTYNSATSVKVYDSLGNTHDLSFYFVKGTPTATGTDWTVNLYVDGTAVTSPAGP 238 Query: 226 TTLEFNANGTLVDGAMANNI---ATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 TL F+ NG L G + +NI AT P T + L+ Q + + + + +G Sbjct: 239 QTLSFDTNGVLTSGGVLSNIQYTATTPNGSTTPMTIATVDLSKSTQFNSSFGVNSLSADG 298 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS-GV 341 PG L S IN+ G + YSN +T +GQ+ LANF N +GL S G N+W SS G Sbjct: 299 NAPGTLTSTNINNQGIIEATYSNGKTVAIGQVALANFTNVQGLQSMGGNLWKDVASSTGG 358 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A +G + + G + + ALE SNVDL+ ELV+MIVAQR YQ+NAQ+IKT+D IL TL+NL Sbjct: 359 AKVGAPMSADLGEIQSQALEQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTILQTLINL 418 Query: 402 R 402 R Sbjct: 419 R 419 >UniRef50_A5V5R7 Flagellar basal body FlaE domain protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5R7_SPHWW Length = 435 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 32/434 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV------GLGVKV 54 M+F A+SGL A+ T+L VI NNIAN T GFK F D+ + S + G G ++ Sbjct: 1 MSFYTALSGLKASQTDLAVISNNIANVGTTGFKRSGTEFGDLVSSSPMQSSGIAGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLV--DSNGSVFYSRNGQFKLDENRNLVNMQ 112 GI Q FT G ++ R LD+AIS GFF +SNG V Y+RNG F +D NR LV+ Sbjct: 61 RGIAQQFTQGGLESSERSLDLAISGQGFFVTRASNSNGQVSYTRNGAFSVDANRFLVDSS 120 Query: 113 GLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV---- 167 G L P G ++ +I +P T +K T T + + S+ +P+ Sbjct: 121 GAYLQALPTDTKGNVTATGLSSARSIQLPLTSGTSKATQTIDLSVTFPSAGDVPSTRAIY 180 Query: 168 -----TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------GDNNWQVYTQDS 215 F ++ +SYN+ + TV+D+ GNA M+ Y+++ D NW +T Sbjct: 181 STTNPYKFDRTDPNSYNQSTTTTVYDAAGNAFPMTTYYIRENLPGGSVTDTNWTAHTFIG 240 Query: 216 SDP------NSIAKTATTLEFNANGTLVDGAMANNIAT-GAINGAEPATFSLSFLNSMQQ 268 + TL F++ G + A N+ + P F+L++ S + Sbjct: 241 DTEISYDSSAATQPAPLTLTFDSTGAKTAPSGAINLGPLTPAGASAPLEFTLNYSGSTKM 300 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + + + Q+GY G L + + DG +V +SN +Q LG+I+LANF+N EGL Sbjct: 301 SASPFTLTSFDQDGYAAGQLDNVSVGADGLIVATFSNGDSQALGKIILANFSNPEGLRQL 360 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 GD+ W AT SG ++G A + G + +GALE +NVD+++ELV +I AQRN+ +NA+TI Sbjct: 361 GDSKWGATGLSGEPIIGEASSNGTGQIQSGALEQANVDITEELVALIQAQRNFSANAKTI 420 Query: 389 KTQDQILNTLVNLR 402 + + + T+VNLR Sbjct: 421 EAANTMTQTIVNLR 434 >UniRef50_Q67K22 Flagellar hook protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K22_SYMTH Length = 418 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 128/429 (29%), Positives = 204/429 (47%), Gaps = 42/429 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------KVGL 50 + VSG+ + T +DVIGNNIAN T GFK+ +F D+F + ++GL Sbjct: 3 SLYSGVSGIRSHQTRMDVIGNNIANVNTTGFKASRVTFTDVFNQTLSSGSALTNPQQIGL 62 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V +G TGR D+AIS G F L +N + YSR G F + + L+N Sbjct: 63 GVAVGSTDLITDEGAFQMTGRAFDLAISGAGLFVLKGANDEILYSRAGMFDWNPDGILIN 122 Query: 111 MQ-GLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVT 168 G+++ G+ A A +I I T+ + TT + + NL+++ + Sbjct: 123 PALGMKVQGWMAVDGVIGRTDRATMQDIQIVRGTVSLPQATTKVTFKGNLDAAAEEDS-- 180 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 + + +DS G +++ F K N W V D TL Sbjct: 181 ----------TYETIINAYDSLGRDIPITLRFTKGDGNTWTVQYWDPETEG--WSEEHTL 228 Query: 229 EFNANGTLVDGAMANN--------IATGAINGAEPATFSLSFLNSMQQNTGA-------N 273 +F ++G ++ N+ T + A+ +L F Q + + Sbjct: 229 DFGSDGRILGPQGPNDDDPRLWTITITDPNDQADDLEITLDFRKITQAYDASGSGGTARS 288 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 + T++G G L + +N+ G ++G Y+N +QLL QI LA+F N GL EG++ + Sbjct: 289 TVELDTRDGRPMGSLEAVYVNELGEIIGRYTNGDSQLLAQIALAHFNNMAGLIKEGNSTF 348 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 + + +SGV +GTAGTG GTL G LE SNVDL+ + MI+ QR YQ++A+ + T D Sbjct: 349 AESPASGVPQIGTAGTGGRGTLVPGNLEGSNVDLAGQFTEMILTQRGYQASARVVSTADD 408 Query: 394 ILNTLVNLR 402 +L ++NL+ Sbjct: 409 MLQEIINLK 417 >UniRef50_D2LSH1 Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSH1_BACS4 Length = 411 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 140/418 (33%), Positives = 192/418 (45%), Gaps = 42/418 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + G+ + T LDV+GNNIAN T GFK G +F D+ + Sbjct: 18 AMYAGIGGMKSFQTKLDVVGNNIANVNTSGFKKGRVTFQDLVSQQMSGAATPTDNRGGIN 77 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG + I T G+ TGR LD+ I+ +GFF + D G +YSR G F LDE Sbjct: 78 PMQVGLGTSMGSIDTIHTQGSLQTTGRDLDIGITGDGFFIVND-GGQSYYSRAGNFYLDE 136 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 N +LVN GL++ GY L+ + T A + NLNS + Sbjct: 137 NGDLVNANGLRVQGYSVVDGELDTNTLGPLQ--IASGQLIPPQATDEAQFKGNLNSETQV 194 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 V DS GN H + + F K N W V + + Sbjct: 195 GETVNVPY------------PVIDSLGNMHYLELTFQKQAGNEWTV--------QAGGQA 234 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 + F +G+ V A + N A P L F M Q + +G Sbjct: 235 LGNVNFGNDGSFV-AADDMTVNFNPGNNANPLNIELDFSR-MSQYARNSTADIHYVSGNV 292 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 G L SY I+ G ++G +SN + +LLGQI LA F N GL+ G+N++ + +SG + Sbjct: 293 DGTLESYSISQAGEIMGVFSNGEVRLLGQIALATFNNPGGLSKSGNNLYMVSNNSGNPQV 352 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G AG G G LT +LE SNVDLS+E MIVAQR +Q+N + I T D+IL LVNL+ Sbjct: 353 GLAGDGGRGMLTGASLEMSNVDLSEEFTEMIVAQRGFQANTRMITTSDEILQELVNLK 410 >UniRef50_A4BQF0 Flagellar hook protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQF0_9GAMM Length = 400 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 148/409 (36%), Positives = 230/409 (56%), Gaps = 16/409 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F A++GLNAA+ +LDV GNN+ANSAT GFKS A FAD++A + +G GV+ Sbjct: 1 MSFETALTGLNAASADLDVTGNNVANSATTGFKSSRAEFADIYALSNVGTAQTSIGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A +TQ FT G TG LD+A++ GFF L ++NG+ YSRNG F+LD + +V+ G Sbjct: 61 LAAVTQQFTQGQFDFTGNTLDLAVNGTGFFAL-NANGTTAYSRNGAFQLDRDGFIVDADG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L GY A ++ + +A + T + NL++ F A+ Sbjct: 120 HRLNGYQA---GSNGAISGALGDLQVNIGNVAPQATANIGLSANLDARAATIPTA-FDAA 175 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + +YN S TV+D+QG H ++YF K DN W +Y D + AK T+ F++ Sbjct: 176 DPATYNFSTSTTVYDAQGKDHFATLYFQKQSDNVWDIYA--DGDDGTGAKDPATVTFDSR 233 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 G V A + A + S+ + +S+ Q ++ +Q+G+ G + + Sbjct: 234 GEFVSATGATTYSFNYAG-AGTSNISVDY-SSLTQYGSVFDVKELSQDGFSTGQFTNLGV 291 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 DDG ++ ++N Q+Q LGQI L+ F + + L GD W+ T +SG + G+ G Sbjct: 292 EDDGRLLARFTNGQSQTLGQIALSRFPSPQSLQQIGDTHWAETFASGAPVTAAPGSSGVG 351 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T+ GALE SNV+L+++LV+MI AQRN+Q+N+Q I TQDQI +++N+R Sbjct: 352 TIQGGALEKSNVNLTEQLVHMITAQRNFQANSQMISTQDQITQSILNIR 400 >UniRef50_A4SL12 Flagellar hook protein FlgE n=3 Tax=Gammaproteobacteria RepID=A4SL12_AERS4 Length = 446 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 148/446 (33%), Positives = 210/446 (47%), Gaps = 44/446 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG+NAA +L+V NNIAN T GFK A FAD++A S +VG GV Sbjct: 1 MSFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVA 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + F G T LD+AI NGFF D +N Y+R G FKL+EN +VN Sbjct: 61 TGAVAHQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNN 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT-NISIPNTLMAAKTTTTASMQINLN--SSDPLPTVT 168 QG L GY N T I +P+ K T NL+ S Sbjct: 121 QGHYLQGYEINTDGTPKAVSINATKPIQVPDRAGEPKMTELVEASFNLSIESKTKPTDPA 180 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD----------NNWQVYTQDSSDP 218 F +N+ ++ SVT++DS G H ++ YFV+ D W +Y + P Sbjct: 181 AFDPTNSATFAHSTSVTIYDSLGAPHVITKYFVRHEDPVTPGTPMTPGTWSMYMYEGDKP 240 Query: 219 NSIA----------KTATTLEFNANGTL----VDGAMANNIAT--------GAINGAEPA 256 IA T + F + G L A I T NGA+P Sbjct: 241 IDIASGAPSPGPGIPTGVQMTFTSGGKLDPALTIPAPPAPIKTVTLGTAAGIINNGADPT 300 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 L+ + Q N+ TQ+G G+L +I DG V YSN T + + L Sbjct: 301 QAVEIRLSDVTQYNSPFNVTKLTQDGATVGNLTKVEITPDGIVSATYSNATTLKVAMVAL 360 Query: 317 ANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 A FAN++GL GD W + SG AL GT +G G++ + A+E SNVDL+ +LVN+I Sbjct: 361 AKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSAVEQSNVDLTSQLVNLIT 420 Query: 377 AQRNYQSNAQTIKTQDQILNTLVNLR 402 AQRN+Q+N+++++ + T++ +R Sbjct: 421 AQRNFQANSRSLEVNSSLQQTILQIR 446 >UniRef50_B2UJX1 Flagellar basal body FlaE domain protein n=3 Tax=Ralstonia pickettii RepID=B2UJX1_RALPJ Length = 402 Score = 326 bits (837), Expect = 7e-88, Method: Composition-based stats. Identities = 182/410 (44%), Positives = 247/410 (60%), Gaps = 17/410 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGL+AA+ NLDVIG+N+AN+ T G+K TA F D++A S +VG GV+ Sbjct: 1 MGFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQVGQGVE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNMQ 112 V ++Q FT G T TG LD+AI+ GF+R+VD+ +G V YSRNGQF+ D+N +++ Sbjct: 61 VTRVSQSFTQGNVTITGNPLDIAINGTGFYRMVDTASGQVSYSRNGQFQTDKNGYIISAT 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G LTGY T A TN+ IP +A TT + INL+++ PT TPFS Sbjct: 121 GQNLTGYGVDSTGKV--NTAVLTNLQIPVNDLAPLATTNTAFGINLDAAATAPTTTPFSP 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 +N+ ++N S V+D G AH ++ Y+V+T W VY+Q + + TTL FN+ Sbjct: 179 TNSATFNHSVSEQVYDGTGTAHMLTNYYVRTATG-WDVYSQVDGNNPTGGNPVTTLTFNS 237 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA-TTQNGYKPGDLVSY 291 NG L ++ ++ A S+ F + Q G N+ TQ+GY G L SY Sbjct: 238 NGQLTSTPSKIAVSFAGMSIA-----SMDFTGTTQYGGGYNDTAPGVTQDGYATGRLASY 292 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 + DGT+ YSN +T LGQI +ANF EGL + G N W T +SG LGT G G+ Sbjct: 293 SVGTDGTITARYSNGRTATLGQIAMANFKAPEGLQNIGGNQWVETSNSGAPNLGTPGMGS 352 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 FG L + A+E SNVDLS+ELVNMI+AQR+YQ+NAQTIKTQD IL TLV + Sbjct: 353 FGLLQSSAVEQSNVDLSQELVNMIIAQRSYQANAQTIKTQDTILQTLVTM 402 >UniRef50_C6MIR8 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIR8_9PROT Length = 423 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 171/427 (40%), Positives = 228/427 (53%), Gaps = 30/427 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLG 51 M F Q +SGL+AA+TNLDV+GNNIAN T G+K A F D+FA S +VG+G Sbjct: 1 MGFQQGLSGLSAASTNLDVVGNNIANVNTVGYKQSQAQFTDIFANSLDGAGSSRTQVGIG 60 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 +VA + Q F G T LD+AI+ GFFR+ D NG + YSRNGQF+LD N L + Sbjct: 61 ARVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSD-NGVISYSRNGQFRLDGNGFLTDA 119 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G+ LTGY TN+ + T ++ + T+T ++ NL S+ P VT F Sbjct: 120 SGINLTGYAPDANGNI--NTGQATNLKLNTTDISPRVTSTFNLGFNLPSNADAPAVTTFD 177 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--NNWQVYTQDSSDPNSIAKTAT--- 226 A+N S+N+K S FDS GN H + YF K+G N W +Y + Sbjct: 178 ANNTQSFNEKKSGVFFDSLGNDHAFTYYFQKSGTLANTWDMYASVDGAIDPTGVPMGVTL 237 Query: 227 ------TLEFNANGTLVDGAMANNIATG------AINGAEPATFSLSFLNSMQQNTGANN 274 TL F+ NG L N++ + P F+L L + Q Sbjct: 238 DGAASVTLTFDDNGILTAPTAPFNVSVDLATINPTLGAGSPLVFALD-LTTATQFGSQFG 296 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 I +GY G L + + +G + GNYSN Q + LGQ+VLA+F N +GL GD W Sbjct: 297 INLAQSDGYASGRLAGFTTSPEGIIQGNYSNGQNKTLGQVVLASFVNPQGLNPIGDGRWI 356 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 T SSG L+G +G G L A+E++NVDL+ ELV MI AQR YQ+NA+TI+TQD I Sbjct: 357 ETPSSGQPLVGEPNSGTLGVLQASAVESANVDLTSELVKMITAQRMYQANAKTIETQDAI 416 Query: 395 LNTLVNL 401 L TLVNL Sbjct: 417 LQTLVNL 423 >UniRef50_A4A615 Flagellar hook protein FlgE n=3 Tax=unclassified Gammaproteobacteria RepID=A4A615_9GAMM Length = 429 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 159/434 (36%), Positives = 232/434 (53%), Gaps = 37/434 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAFS A+SG+NAA +L V+ NNIAN++T GFK+ A FAD++A S +G GV Sbjct: 1 MAFSTAISGINAATADLGVVSNNIANASTTGFKASRAEFADVYATSLLGAGSNAIGKGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +AG+TQ+F G T T LD+AI+ NGFF+L G+V Y+R G F++D LV+ Q Sbjct: 61 LAGVTQEFGQGNITFTNNSLDLAINGNGFFQLS-VEGAVEYTRAGNFQVDREGFLVSNQN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV------ 167 +L G+ G +I I +L+ T+ S+ NL+S + Sbjct: 120 ARLQGFQVDGGG---DVTGQLGDIQIDTSLIDPNPTSNVSLTSNLDSREVTTGTGFATNG 176 Query: 168 ------TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQDSSD--- 217 P +A + +N S T+FDS GN H +S+Y+VKT + N ++VY+ Sbjct: 177 PYDAFAVPPTAPSPADFNATTSTTIFDSLGNPHVLSLYYVKTANPNEFEVYSLIDGQSQD 236 Query: 218 -PNSIAKTATTLEFNANGTLVDG--------AMANNIATGAINGAEPATFSLSFLNSMQQ 268 TL+F +NG A +TGA+NGA TF + L Q Sbjct: 237 PGTGTVGDPVTLQFTSNGQFDPASDTQIDVTAWTPVDSTGAVNGAAAQTFVVD-LQQTTQ 295 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 A + + Q+G+ G L +I++ G Y+N +++ LGQI LA+F N GL Sbjct: 296 FGTAFAVSSVIQDGFAAGQLRGLEIDESGIAFARYTNGESRALGQIALASFNNQNGLQPV 355 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 GD W T SSG +G GT G + + ALE SNV++++ELV++IVAQRN+Q+NAQ I Sbjct: 356 GDTNWVETFSSGSPNVGEPGTSGLGAVQSAALEDSNVEITQELVDLIVAQRNFQANAQVI 415 Query: 389 KTQDQILNTLVNLR 402 + +D I T++NLR Sbjct: 416 QAEDAITQTVINLR 429 >UniRef50_Q47I23 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I23_DECAR Length = 442 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 174/446 (39%), Positives = 244/446 (54%), Gaps = 48/446 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAF Q +SGLN ++ LDV NNIAN++T GFKS + FAD++A S +VG+GV Sbjct: 1 MAFQQGLSGLNTSSKALDVTSNNIANASTVGFKSASTHFADVYAASLAGGGASQVGIGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + I Q FT G T T LD+A++ NGFFR+ +G+V Y+RNGQF LD +VN Sbjct: 61 ASAIAQQFTQGNITTTSNSLDIALNGNGFFRMTQ-DGAVRYTRNGQFHLDSTGYIVNDNK 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTT----TTASMQINLNSSDPLPTVTP 169 LTGY A + + P+ I + ++ + T +NLNS+D +P Sbjct: 120 ENLTGYAADAQGKIVA--STPSGIKVDTAPISPQATGATSDGVRFSLNLNSTDKVPGTAW 177 Query: 170 FSAS-----NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-------------Y 211 S + + +YN +VTV+D+ GNAH M++YFVK+ +V Y Sbjct: 178 TSPTGTNVPDTSTYNYSNAVTVYDTLGNAHTMTMYFVKSAPTAAEVLANPTTTGAWDVHY 237 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGA---------------EPA 256 D + ++ + + F++ G + +A A P Sbjct: 238 QVDGTSEANVGGSPLRMTFDSTGAYLAPTTPATLAVNLNGVATNLSTPANVVTNSATSPL 297 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 +F+++F S Q I + TQ+GY G L S I D+G + G YSN QT+ + QIVL Sbjct: 298 SFAMNFAGS-TQYGSDFAIASKTQDGYASGQLSSLTIGDNGVIQGVYSNGQTRNMAQIVL 356 Query: 317 ANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 ANF N GL S G+N + T SG +++GT TG FG L +GA+E SNVDL+ ELVNMIV Sbjct: 357 ANFQNPNGLMSIGNNDYIETADSGQSMIGTPNTGTFGVLQSGAVEDSNVDLTAELVNMIV 416 Query: 377 AQRNYQSNAQTIKTQDQILNTLVNLR 402 QRNYQ+NAQ+IKTQDQI+ TLVN+R Sbjct: 417 QQRNYQANAQSIKTQDQIMQTLVNIR 442 >UniRef50_A1T0J3 Flagellar hook protein FlgE n=18 Tax=Gammaproteobacteria RepID=A1T0J3_PSYIN Length = 398 Score = 323 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 146/401 (36%), Positives = 212/401 (52%), Gaps = 6/401 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SGLNA L+ I NNIAN +TYGFK A FA ++ G + G GV+V+GITQ+ Sbjct: 1 MSFNIAISGLNATNKQLNTISNNIANVSTYGFKESRAEFASIYNGGQAG-GVEVSGITQN 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F +G+ TGR LD+AIS NGFF VD+ G Y+R+G F D++ +V+ G +L GY Sbjct: 60 FDRNGSLEATGRALDLAISGNGFFATVDNKGQQIYTRSGAFSTDKDNFIVSSAGNKLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 Q N +++I ++AK T + N ++ F ++ S+ Sbjct: 120 TVDAKANL--QKGNIDDLAISTASLSAKATDSIEFTANFDARATPVASAAFDPADPTSFT 177 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + FDS GNAH +S YF+ TG N W + + D + A +EF G L D Sbjct: 178 SSYTAQAFDSLGNAHTVSQYFINTGSNQWNIKVI-ADDNDVTPDPAPVIEFTTEGLLADT 236 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + + + GA + S Q + NGY G+L ++ D+G + Sbjct: 237 STIPILVSIPALGANLIAVEIDLTGS-TQYGADFGVSTNNPNGYTAGELTGIRVEDNGMI 295 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 ++N Q+QL GQ+VLA+F N L + W T SG + G G+G G LT+ Sbjct: 296 FAQFTNGQSQLQGQLVLADFPNPTALEQSNNTSWMQTFGSGTPVKGAPGSGVLGKLTSNM 355 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 LE SNVDL+ ELV+++ AQRNYQ+N +TI T DQ+ L N Sbjct: 356 LETSNVDLTSELVSLMTAQRNYQANTKTISTADQLTKALFN 396 >UniRef50_A3NFX5 Flagellar hook protein FlgE n=13 Tax=Betaproteobacteria RepID=A3NFX5_BURP6 Length = 395 Score = 323 bits (827), Expect = 9e-87, Method: Composition-based stats. Identities = 141/404 (34%), Positives = 215/404 (53%), Gaps = 15/404 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SG+NA + L+ I +NIAN+ TYGFK+G A+FA M AG++ G + ITQ Sbjct: 1 MSFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQA-NGTYIGSITQS 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 T G TGR LD AI NGFF DS+GS+ ++R G F+ D + +V+ G + GY Sbjct: 60 VGTRGGFLPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRAQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 A+G +I +P AK + + NL++ P F + S+N Sbjct: 120 GASGAYG---------DIRVPTDTEPAKASDSLEYVGNLSADWAAPKNPNFDKDDDTSFN 170 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV---YTQDSSDPNSIAKTATTLEFNANGTL 236 + TV+DS G H ++ YFVK + V Y D T L+F+ NG L Sbjct: 171 HSVASTVYDSLGRQHIVTQYFVKGQPPSTDVIAYYAMDGEIVGGNTPVQTVLQFDTNGQL 230 Query: 237 VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 ++ G GA +++ Q G NGY G +++D Sbjct: 231 TAPNSPVDLDLGTPAGASALAIKVNYA-GTTQVAGETTTTVNRDNGYAAGVPGEVMLDED 289 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G VV YSN + + +G + LA FAN +GL++ GD W A+ +SG L+G+AG+G G + Sbjct: 290 GGVVVQYSNGKQRKVGSLALATFANQDGLSAVGDTAWRASAASGNPLIGSAGSGALGKVV 349 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G+LE SN D+++ELV+M+ AQRNYQ+N++ + T++Q++ L+ Sbjct: 350 AGSLELSNADVTQELVDMMSAQRNYQANSKVLSTENQMMQALMQ 393 >UniRef50_Q5DY15 Lateral flagellar hook protein (FlgE-like) n=39 Tax=Gammaproteobacteria RepID=Q5DY15_ECOLX Length = 400 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 149/404 (36%), Positives = 212/404 (52%), Gaps = 10/404 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++ A +GLNA LD I NNIAN+ T G+KS T F+ M+AGS+ +GV VAG Q Sbjct: 1 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYAGSQA-MGVSVAGTAQS 59 Query: 61 FTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 + G+ +TG LD+AI+ +GFF DS G++ Y+R G F+ D+N +VN G L GY Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT--VTPFSASNADS 177 P + Q T+I I + A+ +++ N ++SD PF +N+ S Sbjct: 120 PVDDSGTL--QTGTVTDIQIKTGNIPAQASSSLIFTANFDASDDAIDRTTVPFDPTNSSS 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV-YTQDSSDPNSIAKTATTLEFNANGTL 236 Y + TV+DS GN H + YF KT DN W+V YT D + A TL F+ N Sbjct: 178 YTDSYTTTVYDSLGNEHSVCQYFTKTSDNTWEVQYTFDGQQQTGV--PAMTLTFDPNTGK 235 Query: 237 VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 + + A P ++ + Q ++ NGY Q++DD Sbjct: 236 LTSPTTPQTIEFQTDAAAPIDLTVDYSTC-TQYGSEFSVTTNAANGYASATQNGVQVDDD 294 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G V YSN + L GQ+VLA F N GL + W T SG L+G G+G GTL+ Sbjct: 295 GKVYATYSNGERMLQGQVVLATFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLS 354 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 +G LE+SNVD++ ELVN++ AQRNYQ+N + I T Q+ + L Sbjct: 355 SGVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQLDDALFQ 398 >UniRef50_Q0AYM8 Flagellar hook protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYM8_SYNWW Length = 475 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 134/474 (28%), Positives = 203/474 (42%), Gaps = 76/474 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DVIGNNIAN T G+K F D + Sbjct: 4 SMYSGVSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGSRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 +GLG+ V+ I Q T TT T + LD+ I +G+F + +++R G F+L Sbjct: 64 TNPMGIGLGMSVSSIDQIHTGAPTTATNKLLDMGIDGDGYFMIRHGQ-QKYFTRAGNFEL 122 Query: 103 DENRNLV-NMQGLQLTGYPATGTPPTIQQGANPT----NISIPNTLM-AAKTTTTASMQI 156 D NLV G + G+ P T Q + + + I L + T S Sbjct: 123 DTKGNLVHTANGYYVQGWVTKIDPVTGQWNLDCSREVETVDISGLLACDPQATKEMSFSG 182 Query: 157 NLNSSDPLPTVTPFSAS--NADSYNKKGSVTVFDSQGNAHDMSVYF-------VKTGDNN 207 NL++ P V P S + S+ V+DS G + F +N Sbjct: 183 NLDAEIPFKQVDPEDESIYPGTQESIITSMDVWDSLGKKETVYFRFFKYEVDAGPPRLSN 242 Query: 208 WQV-------YTQDSSDPNSIAKTATT------------------------LEFNANGTL 236 W V +++ D +S + AT L+F+ NG + Sbjct: 243 WAVDISLNNPLFENAKDYDSTSDFATVDLSVDPPTEETLTTGETEIVRLFNLQFDDNGKV 302 Query: 237 VDGAMANN--------IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 V ++ I A AE F + F ++M Q G N++ QNGY G L Sbjct: 303 VLAGTPDDPEPKTVDLIIDRASEAAEDIEFKIDF-SAMTQFAG-NSVTEIAQNGYGMGSL 360 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 SY + DG + G+Y N +T+ L ++ LA F N GL G ++ + +SG A++ Sbjct: 361 SSYTVGIDGVIRGSYDNGETRDLARVALARFQNPAGLTQLGGTMFQKSVNSGEAVVSPPT 420 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +LE SNVDLS+E +MIV QR +Q+N++ I T D+++ LVNL+ Sbjct: 421 ESGMGKIVPSSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMIQELVNLK 474 >UniRef50_D2S9L8 Flagellar hook-basal body protein n=3 Tax=Actinomycetales RepID=D2S9L8_9ACTO Length = 408 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 140/420 (33%), Positives = 211/420 (50%), Gaps = 35/420 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + + A+SGL A T LDV GNNIAN T G+K+ F D + Sbjct: 4 SMNSAISGLRAHQTKLDVTGNNIANVNTVGYKASQTVFEDTLSQVVRNGSAPTAQAGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++VGLGVKVAGIT +F G+ NTGR D IS +GFF + + Y+R G F D Sbjct: 64 PAQVGLGVKVAGITTNFEQGSAQNTGRSTDFMISGDGFF-ITQAGNEQLYTRAGSFSYDG 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 NLV G L G+ AT + +++P +M T ++ NL+S+ Sbjct: 123 AGNLVTPDGALLQGWMATD--GVVNTNGPIRQLTVPFGDVMQPTETDNGAVVGNLSSAA- 179 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 A+ + +T++D+ G AH +S+ F KTGDN W V +D ++ + Sbjct: 180 -----------ANGTGVQTQMTMYDALGKAHQISLSFTKTGDNTWNVVARDENEAVLAST 228 Query: 224 TATTLEFNANGTLVDGAMANNIATGA-INGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 GTL + I A + G+ P ++ + ++Q G + + +G Sbjct: 229 AGPLAFNPVAGTLPAASRTFQITPDASMAGSWPGQVTIDLAD-LRQFGGPSGLTPARVDG 287 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G L S ++ DGTV+G YSN + +G++ LA FAN GLA G++ + +SG Sbjct: 288 NAMGSLQSISLSGDGTVMGVYSNNLREPIGKLALATFANPGGLAKAGNSSFRVGDNSGQP 347 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G G G G+L GALE SNVDL++E +IVAQR +Q+N++ I + D++L LVNL+ Sbjct: 348 AIGEPGGGGRGSLVAGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSSDEVLQDLVNLK 407 >UniRef50_B9L4C8 Flagellar hook protein FlgE n=3 Tax=Bacteria RepID=B9L4C8_THERP Length = 423 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 134/431 (31%), Positives = 201/431 (46%), Gaps = 42/431 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL A T +DVIGNNIAN T GFK G F D+ + Sbjct: 4 SMFSAISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRFTDILSQLVRGASGPTETRGGIN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG V + T G TG+ D+AI +GFF + D + Y+R+G F + Sbjct: 64 PLQIGLGAVVGAVDTIHTQGALQLTGKPSDLAIQGDGFFVVSDGS-QTLYTRDGAFDIGS 122 Query: 105 NRNLVN-MQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 + LVN G + G+ A + I+IP + A TT ++Q NLN++ Sbjct: 123 DLRLVNPSNGFYVLGWQADANGN-VDTAGPVGPITIPIGQQLDAVPTTQITVQGNLNANQ 181 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY----------- 211 A + + V++ DS G H+ + F K G N W Sbjct: 182 D----------PAATPHFVTKVSITDSLGKRHEFYILFDKVGTNTWNYTLQEDDPRTTST 231 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 T+D D + TL F+A+G L A + ++ +++ S Sbjct: 232 TEDDPDFALGGTPSGTLVFDADGNLDLAASNISAVDLDSTAGGASSITVTPDFSRLTQLA 291 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 A NG G L ++ ++ G V+G YSN T+++GQI LA F N GL G N Sbjct: 292 APYSANAAANGAPAGSLTTFTVSQSGQVLGIYSNGVTKVVGQIALALFTNPGGLMKVGGN 351 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + T +SG ++G A +G G + +G LE SNVDL++E +MI+AQR +Q+N++ I T Sbjct: 352 AYLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDLAQEFTSMIMAQRGFQANSRVITTS 411 Query: 392 DQILNTLVNLR 402 D++L LVNLR Sbjct: 412 DEVLQELVNLR 422 >UniRef50_Q44767 Flagellar hook protein flgE n=26 Tax=Spirochaetales RepID=FLGE_BORBU Length = 442 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 139/444 (31%), Positives = 213/444 (47%), Gaps = 49/444 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DV+GNNIAN T GFK G +F DM + S Sbjct: 4 SLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG+ VA I T G +T + D+ +S NGFF L + ++FY+R G F +D Sbjct: 64 PKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGK-NLFYTRAGAFDVDS 122 Query: 105 NRNLVN-MQGLQLTGYPATG--TPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNS 160 +R+LVN G+++ G+ A I ++ ++ IP AK+T + NL+ Sbjct: 123 DRHLVNPANGMRIQGWMARDLEGEKVINTASDIEDLIIPIGDKEGAKSTKNVTFACNLDK 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVYTQDSSDP 218 PL + ++ + +++DS GN + + VK N W + + Sbjct: 183 RLPLIQ-EGANPADIARGTWVVNKSLYDSFGNVSVLELRVVKDLNTPNLWNATVLINGEQ 241 Query: 219 NSIAKTATTLEFNANGTLVD--------------GAMANNIATGAINGAEPATFSL---- 260 NS TL F+ G L N + E T +L Sbjct: 242 NS----NFTLGFDNEGALASLNGQPGQKGDILQIPITFNVLGANVGEVGEQQTVNLKLGT 297 Query: 261 --SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 S+ +S+ Q +++ A Q+GY G + +Y+I+ +G +VG YSN + LG+I LA+ Sbjct: 298 VGSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALAS 357 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 F N GLA GD + T +SG +G G G + +G LE +NVDL+++ +MIV Q Sbjct: 358 FMNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQ 417 Query: 379 RNYQSNAQTIKTQDQILNTLVNLR 402 R +Q+NA+TI T DQ+L LV L+ Sbjct: 418 RGFQANAKTITTSDQLLQELVRLK 441 >UniRef50_D2TJ84 Lateral flagellar hook protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJ84_CITRO Length = 400 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 148/403 (36%), Positives = 210/403 (52%), Gaps = 8/403 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++ A +GLNA LD I NNIAN+ T G+KS T F+ M+A S+ +GV VAG Q Sbjct: 1 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTDFSAMYADSQA-MGVSVAGTAQS 59 Query: 61 FTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 G+ +TG LD+AI+ GFF + DS G++ Y+R G F+ D+N +VN G L GY Sbjct: 60 IARGGSMVSTGNALDLAINNGGFFVMCDSAGNITYTRAGSFETDKNGYIVNASGACLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT--VTPFSASNADS 177 P G+ Q T++ I + A+ T+ + N ++SD PF SN+DS Sbjct: 120 PVDGSGTL--QTGTVTDLQIQTGNIPAQATSNMTFTANFDASDETVDRSTMPFDLSNSDS 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 Y + TV+DS GN H + YF KT DN+W+V S + T G L Sbjct: 178 YTDSYTTTVYDSLGNEHSVCQYFTKTDDNSWEVQYSFDGQMESGVEPVTLTFDPNTGKLT 237 Query: 238 DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 ++ A P + + + Q ++ + NGY Q++DDG Sbjct: 238 SPTSPVSVEF-ETGAAAPIDMTFDYSSC-TQYGSDFSVTTNSANGYASATQNGVQVDDDG 295 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 V YSN + L GQIVLA F N GL + W T SG AL+G G+G+ GTL++ Sbjct: 296 KVYATYSNGERMLQGQIVLATFPNENGLEAVSGTAWVQTGESGSALIGVPGSGSCGTLSS 355 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G LE+SNVD++ ELV ++ AQRNYQ+N + I T Q+ + L Sbjct: 356 GMLESSNVDITTELVELMTAQRNYQANTKVISTSTQLDDALFQ 398 >UniRef50_C6P7Q7 Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Q7_CLOTS Length = 420 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 133/430 (30%), Positives = 216/430 (50%), Gaps = 43/430 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVSGL A +DVIGNNIAN T GFK+ +F ++F + Sbjct: 4 SMYSAVSGLKAHQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQGSGGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV +A I FT+G + T D++I NGFF + ++ G+ Y+R G F D Sbjct: 64 PQQVGLGVAIASIDTLFTNGGSQRTDNPTDLSIDGNGFFIV-NNGGANLYTRAGNFSFDS 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTT-ASMQINLNSSDP 163 N +LV G ++ G+ + N + ISI N + +T + NL++ Sbjct: 123 NGDLVTPDGYKVMGWISQDGKTVNTDTGNLSPISIKNWSSTSPASTKLIQLGGNLDAGTS 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQ--VYTQDSSDPNS 220 + + +VT++DSQG +H ++ F K + NW + D +D ++ Sbjct: 183 IGSSV------------SYNVTIYDSQGGSHVATIQFTKKDNAGNWDAAITNFDGNDLSA 230 Query: 221 IAKTATTLEFNANGTLVDGA--------MANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 T +++F++NG + + A + I + ++ N + + + Sbjct: 231 SPVTIGSIQFDSNGLITNPAGSIFSVNVSSLPITNTNATLGDGTNITIDLSN-LTMYSSS 289 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 +I +++G + G + S I+ G V G YSN +TQ++GQI LA+F N +GL G+ + Sbjct: 290 TDIRELSKDGNEAGSIESINIDQYGVVSGIYSNGRTQVIGQIALADFQNTQGLEKVGNTM 349 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 + T +SG ++G A TG GT+ G LE SNVDL+ E NMI QR +++N++ I T D Sbjct: 350 FINTVNSGDPMIGAANTGTRGTINPGTLEMSNVDLANEFANMITTQRGFEANSKVITTSD 409 Query: 393 QILNTLVNLR 402 +IL LVNL+ Sbjct: 410 EILQDLVNLK 419 >UniRef50_C8WYV8 Fagellar hook-basal body protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYV8_DESRD Length = 433 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 140/434 (32%), Positives = 220/434 (50%), Gaps = 40/434 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A VS L A ++VIGNN+ANS T FK+ F+D+ A +VG GV Sbjct: 6 ALYTGVSALGATGEAMNVIGNNLANSNTTAFKASRTLFSDLLASDVSSSSGTSQVGTGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 +A + F+ G T D+AI GFF++ D N G+ Y+R G F ++ LVN Q Sbjct: 66 LASVDTVFSQGGFNPTESSTDLAIEGEGFFKVSDPNTGADAYTRAGGFNFNDEGFLVNPQ 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G ++ GY G T+ N +I + + A+ T AS+ NLN+S + + Sbjct: 126 GYRVQGYDVDGDGNTV---GNLKDIYTDLSGSVPAQETGRASLSTNLNASAEVGASFDIN 182 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 A + N S+ V+DS G +H +VYF K G N W + + + ++F Sbjct: 183 -DPAGTSNFSTSINVYDSLGTSHLANVYFTKAGSNAWNYHVTADVGGTNTVLKSHQIKFT 241 Query: 232 ANGTL---------------VDGAMANNIAT--------GAINGAEPATFSLSFLNSMQQ 268 + G L G NN+ T NG++ F + F ++ Q Sbjct: 242 STGYLKEVDGNSYMNEKGEIPAGQEGNNVITVKNTGNPINWGNGSDGHVFDVEF--NLSQ 299 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 G + +V+ Q+G+ G L +++ +G V+G+YSN +++ L ++ LA FANN GLA Sbjct: 300 YAGQSELVSKQQDGFSSGALNGIEVDQEGMVIGSYSNGESKDLAKLGLAKFANNNGLAQV 359 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G++++ AT +SG+ +GT G GT+ + ALE S VD++K+ +MI QR YQ+N++TI Sbjct: 360 GNSLFEATNASGLPAIGTPG-AGVGTIRSNALEQSTVDIAKQFTDMITTQRAYQANSRTI 418 Query: 389 KTQDQILNTLVNLR 402 T D +L +VNL+ Sbjct: 419 TTTDDMLQEVVNLK 432 >UniRef50_C6WVA7 Flagellar basal body FlaE domain protein n=3 Tax=Betaproteobacteria RepID=C6WVA7_METML Length = 421 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 176/425 (41%), Positives = 239/425 (56%), Gaps = 27/425 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGV-------K 53 M+F Q +SGLNAA+ L+VIGNN++N+ T GFK A FAD+FA S G G Sbjct: 1 MSFQQGLSGLNAASKQLEVIGNNVSNANTVGFKQSRAEFADVFANSITGGGGSQIGIGTN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q FT G T T LD+AI+ NGFFR+ S G+V Y+RNGQF+LD+ +V+ Sbjct: 61 LATVAQQFTQGNITATNNSLDIAINGNGFFRMS-SGGAVTYTRNGQFQLDKQGFIVDSAS 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS-SDPLPTVTPFSA 172 +LTGY A + ++ I + TT INL+S ++P+P FS+ Sbjct: 120 KRLTGYAADANGNIL--SGAAVDLQINTADIQPVATTKIEGTINLDSRNNPMPAAPVFSS 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT-TLEFN 231 ++ +YN +VTV+DS GN+H + +F KT N W +YT P + AT + F Sbjct: 178 TDPTTYNNSTAVTVYDSLGNSHTLQNFFRKTAANVWDIYTTVDGAPIPASGAATAQMTFT 237 Query: 232 ANGTLVDGAMA--------------NNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 G N T NGA T ++ + S Q A +I A Sbjct: 238 GTGVSPTITPTAPATGIPSVTFTPMNTATTPVANGAANVTTTIDYSKS-TQFGSAFSINA 296 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 +Q+G+ G L + DGT+VG YSN Q++ LG++VL++F N GL S G N W+ + Sbjct: 297 LSQDGFTSGRLSGFNTASDGTIVGRYSNGQSKNLGRVVLSSFTNPNGLQSLGGNAWAVSA 356 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SSG AL G G+G G L + A+E SNVDL+ ELVNMI AQR YQ+NAQTIKTQDQ+L T Sbjct: 357 SSGPALTGAPGSGLLGVLQSSAVEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVLQT 416 Query: 398 LVNLR 402 LVNLR Sbjct: 417 LVNLR 421 >UniRef50_A0YG82 Flagellar hook protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG82_9GAMM Length = 429 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 147/432 (34%), Positives = 234/432 (54%), Gaps = 33/432 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV------GLGVKV 54 M+F+ A+SGL AA T+L+V GNNIAN++T GFK A F D++A S V G GV V Sbjct: 1 MSFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEFGDVYANSLVSGSNTTGSGVLV 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 I+Q F G + T LD+AI+ GFF + +S+G+ Y+R G F +D+ + N G Sbjct: 61 NSISQQFDQGNISFTDNSLDLAINGTGFFVVAESSGATAYTRAGYFGIDDEGYITNNSGS 120 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L G+ T G P ++ + + +A T+ + NL++ P+++PF+ ++ Sbjct: 121 TLQGF--LPTGTGSGVGGTPADLRVQSGDLAPSATSAVDLLFNLDARGDAPSISPFNPND 178 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSI------------ 221 AD++N S+T+FDS+G A S ++ KT +N W ++ S D ++ Sbjct: 179 ADTFNSSTSLTIFDSRGQAQVFSTFYEKTAVENVWNMHAYISDDAGNLQNVISPAGGAGG 238 Query: 222 AKTATTLEFNANGTLVDGAMA-----------NNIATGAINGAEPATFSLSFLNSMQQNT 270 A L F +G L +N ++ + A + F+++ S Q Sbjct: 239 ANPFFQLTFGTDGLLTGTNPTGLTIDNWNPQGSNQSSTNGSTAIASDFTINIGPS-TQFG 297 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 ++ A QNG+ G L +IN G V Y+N + +LGQ+ +A F+N +GL G+ Sbjct: 298 SDFSVAAVDQNGFATGKLTGLEINTTGEVFARYTNGEALILGQVAMALFSNEQGLNPLGE 357 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 W+ + SG ++G TGN G + +GALE SNVDLS+ELV +I+AQRN+Q+NA+TI+T Sbjct: 358 TGWAQSFESGEPVVGAPLTGNLGGIQSGALEESNVDLSEELVRLIIAQRNFQANAKTIET 417 Query: 391 QDQILNTLVNLR 402 D + ++N+R Sbjct: 418 ADTVTQAIINIR 429 >UniRef50_A0LT62 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A0LT62_ACIC1 Length = 398 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 140/419 (33%), Positives = 205/419 (48%), Gaps = 43/419 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL A T LDV+GNNIAN T GFK+ F D + Sbjct: 4 SLFSGVSGLRAHQTMLDVVGNNIANVNTVGFKASQVEFEDTLSQMLRAAGAPQGVQGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++VGLGV++A I+ FT G TG D+ I +GFF ++D G Y+RNG F D Sbjct: 64 PAQVGLGVQIAAISTTFTQGPAETTGVDTDLMIQGDGFF-VLDDGGQRVYTRNGAFSFDA 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 N NLV+ G + G+ A+G + T I +P T M TTTA++ NL Sbjct: 123 NGNLVSANGALVQGWLASG--GVVNTTGPVTAIKLPLGTSMPPSATTTATLAGNL----- 175 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 ++ ++TV+D++G A ++ + D + D P + Sbjct: 176 --------PADGSGSPIDNNLTVYDAKGQATQYTLEYSY--DTTSNSWKLDILPPGGGSP 225 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 T L F++ +G + G N SL L+ + G N + + +G Sbjct: 226 TNVPLSFDSTTGQYNGTNPQTVTLGGQN------ISLD-LSGLTAYGGGNTVEVVSSDGS 278 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L SY I+ DGT+ G ++N Q L +I LA F N GL G + ++ + +SG A Sbjct: 279 AMGSLASYTISPDGTIQGVFTNGMKQPLAKIALATFNNPGGLTKVGTSEYAESVNSGAAQ 338 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G +GTG+ G L G LE SNVDLS+E N+I+A+R +Q+NA+ I T DQ+L LVNL+ Sbjct: 339 IGASGTGSRGQLAAGELEGSNVDLSQEFTNLIIAERGFQANAKVITTSDQVLQDLVNLK 397 >UniRef50_B1K372 Flagellar basal body FlaE domain protein n=54 Tax=Burkholderia RepID=B1K372_BURCC Length = 414 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 167/421 (39%), Positives = 234/421 (55%), Gaps = 26/421 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M + Q +SGL A++NLDVIGNNIAN+ T GFK G A+FADM+A S ++G+G + Sbjct: 1 MGYQQGLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q+F GT +T LDVAI+ NGFF++ SNG YSR+G F D+N +V+ QG Sbjct: 61 LASVQQNFGQGTINSTKSSLDVAINGNGFFQMS-SNGVTTYSRDGTFHRDKNGAIVDAQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY A + A + P + +A + T+ + Q NLN+ D +P TPF+A+ Sbjct: 120 RNLMGYAAGAGG--VINTAQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNAT 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + +YN S+ V+D+ G + +++YF K WQ Y T+ F+A+ Sbjct: 178 DNTTYNYNSSIQVYDTLGGSQQVTMYFAKNAAGTWQAYAGVQG---QTPTNLGTVTFDAS 234 Query: 234 GTLVDGAMANNIATGA------------INGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 G L A GA P +L L Q G + + Q+ Sbjct: 235 GRLSSTTSAATGQPTPSLGQFAFSIPNTTGGANPQNLTLD-LGGTTQYGGKDGVNNLAQD 293 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G+ G L ++ I DG + GNYSN Q+ +LG I LANF N GL + G N ++ T +SGV Sbjct: 294 GFASGTLTTFSIGTDGKLTGNYSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGV 353 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + G+ N GTL ALE SNV+L+ ELVN+I AQRNYQ+NAQTIKTQ + TL+NL Sbjct: 354 PQISAPGSTNHGTLQGSALENSNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLNL 413 Query: 402 R 402 R Sbjct: 414 R 414 >UniRef50_D0L1M3 Flagellar hook-basal body protein n=5 Tax=Chromatiales RepID=D0L1M3_HALNC Length = 418 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 152/420 (36%), Positives = 220/420 (52%), Gaps = 20/420 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F+ +++GLNAA +LDV NNIAN+ + GFKS A F D++A + G GV Sbjct: 1 MSFNTSITGLNAAQKDLDVTSNNIANANSTGFKSSRAQFGDIYAVSAYGNSKTATGQGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRNLVNM 111 + Q FT G+ T LD+AIS GFF + S+ YSR G +++ +VN Sbjct: 61 TEAVQQQFTQGSLQFTNNSLDLAISGQGFFTFQPTLDSLQSVYSRAGALGANKDGFIVNT 120 Query: 112 QGLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L P + A+ I +P A K TT + NL +S +PTVTPF Sbjct: 121 NGQYLKALPVSANGTLQSTSLASAKPIQLPVAAGAPKATTLVTQSFNLPASATVPTVTPF 180 Query: 171 SAS----NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQDSSDPNSIAKTA 225 + + SY + S V+DS GN H ++ Y+VKT + N W VY Q D + + Sbjct: 181 DTTQATPDPASYTQANSQQVYDSLGNTHTLTSYYVKTANPNEWNVYYQ--VDTQTPIQGP 238 Query: 226 TTLEFNANGTLVDGAMANNIATGAIN---GAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 +TL F+ANG L + A + GA P ++ Q N+ A +Q+G Sbjct: 239 STLTFDANGQLPTTPAPFAVTATAASLGTGAAPLNINVQTQGDSTQYNAPFNMAAQSQDG 298 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G L + +G + +YSN Q LG + LANF+N +GL G+N W+ + SG Sbjct: 299 NTTGQLTGVSVGSNGLIQASYSNGQNIPLGMVALANFSNPQGLKQVGNNSWAESVDSGAP 358 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G GTG FG + GALE SNVDL+++LVN+I AQRN+Q+NAQ I+T ++++N+R Sbjct: 359 TAGQPGTGTFGLIQGGALEQSNVDLTQQLVNLITAQRNFQANAQAIQTDKTATDSVINIR 418 >UniRef50_Q7WA94 Flagellar hook protein FlgE n=3 Tax=Bordetella RepID=Q7WA94_BORPA Length = 473 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 183/475 (38%), Positives = 243/475 (51%), Gaps = 75/475 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q +SGLNAA+ NLDVIGNNIANS T GFKSG ASFAD++A S+VGLGVKV+ I Q Sbjct: 1 MGFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYASSRVGLGVKVSAINQR 60 Query: 61 FTDGTTTNTGRGLDVAISQ-NGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 FT G + TG D+AI GFFRL D +G VFYSRNG+F +D+N +VN QG +LTGY Sbjct: 61 FTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFRLTGY 120 Query: 120 PATG---------------TPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD-- 162 PA G P TN++ ++ T + L+ + Sbjct: 121 PAGGVGAQPVDLQLPQGNIAPQATSTAGLQTNLNANAKVIDPNDTPADDGAVELDGTTYR 180 Query: 163 ----------------------------------------------PLPTVTPFSASNAD 176 PL PF +N Sbjct: 181 FTNASGTFAWVAPAPLDGTYNGGDIVIAGGAVTGDLASQPGYQPYKPLVAGIPFDPTNPL 240 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDSSDPNSIAKTA-TTLEFN 231 SY + TV+DS GN+H M YF K ++ ++VY P + A TL F+ Sbjct: 241 SYTDQVPTTVYDSLGNSHQMIQYFAKRPAVGTESVYEVYYVLDGQPMQVNGGASQTLNFD 300 Query: 232 ANGTLVDGAMANNIAT----GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 G L++ + G A+P ++S+ Q G++ QNGY G+ Sbjct: 301 TAGNLLNQPPTAQVTFANPGGNAAPADPLAITVSYNGVTQY--GSDFAPKVVQNGYSSGE 358 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 + + DG++V Y+N +TQ +G +VLANF N +GL G+N W T SG A LG Sbjct: 359 FMGLSVGKDGSLVAKYTNGETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQP 418 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GT T+ ALEASNVD+S+ELVNMIVAQR YQ+NAQTIKTQD+++ L+N+R Sbjct: 419 GTNGLATIAGQALEASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNMR 473 >UniRef50_A3JJM5 Flagellar hook protein E n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJM5_9ALTE Length = 435 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 143/440 (32%), Positives = 223/440 (50%), Gaps = 43/440 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-------SKVGLGVK 53 MAF+ +SGL AAA +LDV GNNIAN++T GFK F D++A + VG G+ Sbjct: 1 MAFNTGLSGLRAAAVDLDVTGNNIANASTVGFKGSRVQFGDLYANGFLSSGNAPVGDGIS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F G + T GLD AI +GFF ++++ G + YSR GQF D++ +VN Q Sbjct: 61 VQSVKQSFGQGNVSFTDNGLDFAIDGDGFF-VLNNGGELRYSRAGQFGTDKDGFVVNNQN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL---PTVTPF 170 +++ G+ A ++ I + ++ + TT +NL++ + + PF Sbjct: 120 MRVQGFVADAAGNL---SGIRDDLQIGSDNLSPQRTTNLRTDLNLDAREQVLTATPPIPF 176 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-----NNWQVYTQDSSDPNSIAKTA 225 + +YN + +FDS GN H+++ ++ K +NW ++ Q + A + Sbjct: 177 DPLDPTTYNHVTATNIFDSLGNPHEVTQFYTKQAPASGSQSNWLLHLQIDGEAVGGAAGS 236 Query: 226 TT---------LEFNANGTLVDGAMANNIATGAIN--------------GAEPATFSLSF 262 TT L F+ +G L N N A F L+ Sbjct: 237 TTTPPNFVPYELVFDQSGNLASADSNANGVISIANWVPKDGDLNANGAASGAGAAFDLN- 295 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L S Q + Q+G+ G L ++ G + Y+N Q++ LGQ+ LA+F N Sbjct: 296 LGSATQYGANFGVNDQRQDGFTTGRLSGLDVSQQGVIFARYTNGQSKSLGQVALASFNNT 355 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 +GL+ GD W T SG A++G +G G + + ++E SNVDLS ELVN+I+AQRNYQ Sbjct: 356 DGLSPSGDTSWVETFESGQAVIGRPDSGTLGAIQSSSVEESNVDLSAELVNLIIAQRNYQ 415 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +NA+TI+T D + T++NLR Sbjct: 416 ANAKTIETSDAVTQTIINLR 435 >UniRef50_Q1I728 Flagellar hook protein FlgE n=8 Tax=Pseudomonas RepID=Q1I728_PSEE4 Length = 463 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 151/468 (32%), Positives = 234/468 (50%), Gaps = 73/468 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA LDV GNNIAN T GFKS A FAD++AG+ +VG GV Sbjct: 1 MSFNIGLSGLYAANKQLDVTGNNIANVNTNGFKSSRAEFADVYAGANRLGVGKNQVGNGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 ++A ++Q F G NTG LD+ I GFF L D NGS+ YSR G F+ +++ +V Sbjct: 61 RLANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSD-NGSLSYSRAGAFQTNKDNFVVTSD 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS- 171 GL+L GY A Q T++ I + +A K+TT INLNSS + + Sbjct: 120 GLRLQGYAADANGKI--QKGVLTDLKIDTSALAPKSTTLIDQGINLNSSALDIPLQVWDA 177 Query: 172 --------------ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----- 212 ++ +Y+ V+DSQGN H M ++ KTG N W +YT Sbjct: 178 TATPPAMVPNKPFDPTDRTTYSDSFPTKVYDSQGNEHVMEQFYRKTGTNEWTMYTLVDGR 237 Query: 213 ----QDSSDPNSIAKTATTLEFNANGTLVDGAMA-------------------------- 242 ++ P T+ FN +G++ + + A Sbjct: 238 NPFTPGAAAPAGTTPLTGTINFNPDGSVKNMSTAATGVPTTPAGQFEWSVTNNIFSMKGW 297 Query: 243 ---------NNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 N + GA+ A+ S++ S A ++ +Q+GY G L + I Sbjct: 298 VPAAKDAAGNWASNGAVGNADGMRLSMN---STTSYNTATARMSQSQDGYATGILSNLSI 354 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 + G + ++SN+Q++ +GQ+ +A+FAN +GL G W + +SG+ + TG G Sbjct: 355 DSTGVMFASFSNQQSRAIGQVAIASFANPQGLQQIGGTRWKESFASGIPGIDAPKTGTLG 414 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++ + +LEASNV+L++ELV +I AQ NYQ+NA+TI T+ I+ T++ + Sbjct: 415 SVESNSLEASNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQM 462 >UniRef50_C2BUK6 Flagellar basal body and hook protein n=3 Tax=Mobiluncus RepID=C2BUK6_9ACTO Length = 484 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 135/482 (28%), Positives = 208/482 (43%), Gaps = 83/482 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +SGL+ T LDV NNIAN T GFKS + F D F+ Sbjct: 4 SLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNERGGM 63 Query: 46 --SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 ++VGLGVK+ ITQ+FT G TGR LD I+ +GF+ L +NGS Y+RNG F LD Sbjct: 64 NPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSFGLD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 +V G + G+ TI P NI++P + + TT N+ + Sbjct: 124 AQGQVVAADGSFVQGWMGDKDG-TINASGTPGNITLPLTKTVEGRPTTKVIYGGNIPADQ 182 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG------DNNWQVYTQDSS 216 T S +++ + V +D +GN HD+ + F + + W++ D++ Sbjct: 183 IYMDPTGSKTSPDNAFQRSQIVHAYDDKGNPHDVLLTFARNDFANPGSEPMWELRAYDAN 242 Query: 217 -------------------------------------DPNSIAKTATTLEFNANGTL--- 236 + +F +GTL Sbjct: 243 VFKELDETQREKLTNDGGARIALEVEDGGSVSIGGSKVKPADGDGVLNFKFKTDGTLDED 302 Query: 237 ----------------VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 V+ ++ +L L+++ G NN Sbjct: 303 SLKAMKTVKFKLDQVNVNETTTPKSSSILQPNVTKQPINLD-LSALTGFGGVNNFGQKQV 361 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +G G + Y + DGT+ G +SN + L +I +A+FAN GL G + + T +SG Sbjct: 362 DGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGLEKAGSSYFVETGNSG 421 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 +G AGTG G +T GA+E SNVDL+ E N+I++QR +Q+N++ I T D+IL LVN Sbjct: 422 QPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANSRVITTSDEILQELVN 481 Query: 401 LR 402 ++ Sbjct: 482 MK 483 >UniRef50_Q1QW31 Flagellar basal body FlaE n=2 Tax=Gammaproteobacteria RepID=Q1QW31_CHRSD Length = 387 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 168/404 (41%), Positives = 234/404 (57%), Gaps = 19/404 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQ++SG+NAA++ LD IGNNIANS T GFKS + FAD+FA S+ GLG +VAG QD Sbjct: 1 MGFSQSLSGVNAASSQLDTIGNNIANSQTVGFKSSSVQFADIFANSQ-GLGTRVAGKLQD 59 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F G+ TGRGLD+AI+ +GFF+ N + YSRNGQ + + N QG +LT Sbjct: 60 FGTGSLETTGRGLDLAIAGDGFFQFTQ-NEQLAYSRNGQLSMSADGYFENAQGARLT--- 115 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 + + A+ TT NLN+ F+ +D+Y+ Sbjct: 116 ----------DQQGEPLQVTQFSQGAQATTGVETAFNLNAETEALAPNNFNQDQSDTYSY 165 Query: 181 -KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTL-VD 238 + TV+DS G AHDMS+Y+ KTG+N+W+V + + A ++ FN +G VD Sbjct: 166 VTNAGTVYDSLGVAHDMSLYYTKTGENDWEVRAALDGEM-ADGGAAQSISFNESGVPDVD 224 Query: 239 GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 A++ N A+ + L Q A + Q+G G V +I ++G Sbjct: 225 TALSFNFGDLGNGSADFDNIEVD-LAGTTQYGEAFELREFAQDGNASGTFVGVEITENGE 283 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 V+ NYSN ++ +G + +ANF N EGL +GDN+W+ATQ SG ALLG AGTG G+L +G Sbjct: 284 VLANYSNGNSEAVGTVGMANFRNPEGLEPQGDNLWAATQESGAALLGQAGTGQLGSLESG 343 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LEASNVDL++ELV+MI+AQRN+Q+N I+TQ IL T+ NLR Sbjct: 344 TLEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVTNLR 387 >UniRef50_B4RV33 Flagellar hook protein n=29 Tax=Gammaproteobacteria RepID=B4RV33_ALTMD Length = 461 Score = 309 bits (793), Expect = 9e-83, Method: Composition-based stats. Identities = 142/461 (30%), Positives = 219/461 (47%), Gaps = 59/461 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG++AA +LDV NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLAGGKTKVGDGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + Q F+ G+ T LD+AI+ NGFF V ++ ++R GQFKLD + +VN Sbjct: 61 TQEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNS 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT-NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L G+P + + T + IP++ + + T+ +++NL + D F Sbjct: 121 NGDNLLGFPVNADGTSASVALSTTEPVRIPDSSGSPQQTSEVDIRMNLPAGDAGLDPQDF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDS----------- 215 + + +YN SVTV+DS G++H M+ YF+K G DN W V T Sbjct: 181 NPEDPLTYNAATSVTVYDSLGDSHVMTYYFIKDGSPGVDNEWYVATAIDDTLVDMTDSAG 240 Query: 216 ------------SDPNSIAKTATTLEFNANGTLVDGAMANNIAT---------------- 247 A TA+ L F+ G + AT Sbjct: 241 NDTDPATAVNSVGGNTGNAVTASKLIFSQGGDFSGMETPDGNATLDFKMQTEALGAGILA 300 Query: 248 --GAINGAEPATFSLSFLNSM----QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 N F+L ++ Q A + + Q+G G L I DG V Sbjct: 301 NGSDPNQQISIDFNLDVNSATPNEPTQFASAFEVTSLEQDGLPVGRLTGIDIGPDGLVRA 360 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 +SN ++ + ++ L F+N +GL E W + SG AL G A TG FG + + ALE Sbjct: 361 TFSNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALE 420 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +NV+L+ EL++MI+AQRN+Q+N++ ++ + + T++N+R Sbjct: 421 QANVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNIR 461 >UniRef50_Q7NU18 Flagellar hook protein flgE n=1 Tax=Chromobacterium violaceum RepID=Q7NU18_CHRVO Length = 416 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 166/421 (39%), Positives = 233/421 (55%), Gaps = 25/421 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SG+NAA+ LD IGNN+AN+ T GFKS F D++A S G GV Sbjct: 1 MGFQQGLSGINAASVQLDSIGNNVANANTVGFKSSRTEFGDLYAQSIFGTAANSPGNGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V +T + + G T NTGR LD+AI+ NGFF + NG+ YSR+GQF+++ LVN G Sbjct: 61 VLAVTANMSAGNTENTGRSLDLAINNNGFFIMNQPNGTQTYSRDGQFQVNSQGYLVNSYG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY + Q N+ I NT ++ + T+ S + LNS+ +P +P + + Sbjct: 121 AYLQGYGVNTSGQ--PQVGPLQNLQITNTTISPQATSQISWPVQLNSNATVPVNSPVNPT 178 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYF----VKTGDNNWQVYTQDSSDPNSIAK-----T 224 + +YN V+DS GN+H +++Y+ N W V P +I T Sbjct: 179 DPTTYNWPSPTVVYDSLGNSHQVTLYYSLASTSATGNTWTVTPYVDGAPATIPGGGSGNT 238 Query: 225 ATTLEFNANGTLVDGAMAN----NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 +++FN NG+L + AN T + + +L+ N + QN G I TQ Sbjct: 239 NFSVKFNNNGSLANTTPANVNLTFNTTNGSSTPQTVAINLTGSNQIAQNYGTGTI---TQ 295 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 NG PG L I +G V +SN QT+ LGQ+ LA F N +GL + G N W + +SG Sbjct: 296 NGSAPGLLTGVSIASNGVVQATFSNSQTKTLGQVALATFVNPQGLLNLGGNQWQQSGNSG 355 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 A + GTGN GTLT G++E SNV+L+ ELVNMI AQR YQ+NAQTIKTQD ++ TL+N Sbjct: 356 PATVNQPGTGNAGTLTAGSVEDSNVNLTNELVNMITAQRYYQANAQTIKTQDTLIQTLLN 415 Query: 401 L 401 + Sbjct: 416 I 416 >UniRef50_A6GSX9 Flagellar hook protein E n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX9_9BURK Length = 437 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 145/433 (33%), Positives = 215/433 (49%), Gaps = 35/433 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 +F Q +SGLNAA L+VI NN++N++ GFK A F+D+FA + +GLG Sbjct: 8 SFQQGLSGLNAAQRGLEVIANNVSNASVVGFKGSEAEFSDVFARAFNGARSTNGIGLGTS 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A +TQ+F G TG LD+AIS GFF++ NG Y+RNGQF L+ +VN +G Sbjct: 68 LAAVTQNFKQGNINVTGNPLDLAISGTGFFKVQAGNGDNIYTRNGQFTLNNEGVIVNSRG 127 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP-LPTVTPFSA 172 +L G+P A +I +P + T +A++++NL++ + F Sbjct: 128 DKLQGFPVDAATGRPSDVAQ--DILVPRGSIPPAATRSANLELNLDARATAIDPALAFDP 185 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK--------- 223 +N +++N S+TV+D G AH M++Y K N+W V+ + Sbjct: 186 ANLNTFNNSTSMTVYDELGGAHIMAIYMRKEASNDWSVFATVDGTQVDVGTAPVAVTTAP 245 Query: 224 ---TATTLEFNANGTLVDGAMANNIA-----------TGAINGAEPATFSLSFLNSMQQN 269 T+ L++ +G L N + G P F+ N Q Sbjct: 246 AQSTSANLQYGVDGLLTTPNSGNLTVDMSRFVTASGVPFSSTGTAPNQFTFDMSN-TTQY 304 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + + Q+G++ + + DG + +Y+N Q QI L F N EGL G Sbjct: 305 GSSFVVQNLGQDGFESSPFAGFDVGADGMLTISYANGQLVNHAQIGLYRFPNPEGLQPVG 364 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 N W AT SSG L+ + FG + +GALE SN+DL+ ELV MI AQR YQ+N+QTIK Sbjct: 365 SNGWLATNSSGPELVSLSEDTAFGIIQSGALEESNIDLTAELVAMISAQRVYQANSQTIK 424 Query: 390 TQDQILNTLVNLR 402 TQD I T+ NLR Sbjct: 425 TQDSIFQTITNLR 437 >UniRef50_O07884 Flagellar hook protein flgE n=7 Tax=Treponema RepID=FLGE_TREPA Length = 463 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 129/461 (27%), Positives = 200/461 (43%), Gaps = 62/461 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSG+ T +DVIGNN+AN T GFK G +F D+ + Sbjct: 4 SLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSAAARPNEEVGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV +A I T G TG DV+I +GFF L F++R G F +D Sbjct: 64 PKEVGLGVLIASIDTVHTQGALQTTGINTDVSIQGSGFFVLKSGE-KTFFTRAGAFGVDN 122 Query: 105 NRNLVN-MQGLQLTGYPATG--TPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNS 160 LVN G+++ G+ A I A ++ IP + A+ T+T NL+ Sbjct: 123 AGTLVNPANGMRVQGWMAQDVAGERLINSSAQTQDLVIPIGQKIDAQQTSTVHYACNLDK 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 + ++ V+DS G H + + F + N Q + DP + Sbjct: 183 R-LPELAADANEADVRKSTWTTDFQVYDSFGQQHTLQINFSRVPGTNNQWQATVAVDPGT 241 Query: 221 IAKTAT--------------TLEFNANGTLVDGAMANNIATGAINGA------------- 253 T T + F+ G L TG Sbjct: 242 EVDTQTRVGVGTSDGAANTFIVNFDNFGHLASVTDTAGNVTGPTGQVLLEASYDVVGANP 301 Query: 254 ------EPATFSLSFL------NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 F+L+ N++ Q + A Q+GY G L +++I+ G + G Sbjct: 302 DDAGQVTRHAFTLNLGEIGTARNTITQFAERSTTKAYRQDGYAMGYLENFKIDQSGVITG 361 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 YSN +Q +GQ+ LA FAN GL G+N + + +SG+A + T+G G L G LE Sbjct: 362 VYSNGVSQDIGQLALAGFANQGGLEKAGENTYVQSNNSGIANISTSGVMGKGKLIAGTLE 421 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDL+ + +MI+ Q+ +Q+ A+TI+T D +L+T+++L+ Sbjct: 422 MSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLSLK 462 >UniRef50_B0THB1 Flagellar hook protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THB1_HELMI Length = 442 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 133/452 (29%), Positives = 204/452 (45%), Gaps = 65/452 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+ L T +D IGNNIAN T GFK +FAD + Sbjct: 4 SLFSGVTALRNHQTRMDTIGNNIANVNTIGFKKSRVTFADALNQTIRGASSPQGGRGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG+ +A + FT + TG+ D+AI +GFF L+D G+ +Y+R G F LD Sbjct: 64 PMQVGLGMNIATMETVFTPASVQGTGKNSDLAIEGDGFF-LLDDGGARYYTRAGNFDLDT 122 Query: 105 N-RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSD 162 + G+++ GY A T I +P I+I + L M A T NL S Sbjct: 123 EYNFIRTDNGMKVMGYIADATGE-IDANGDPVPINIKDKLQMTASATNRVEFNKNLYSLQ 181 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----TGDNNWQVYTQDSSD- 217 A + + S+ ++DS+G H++ + F T N WQV + +++ Sbjct: 182 ------------ASAKPIQKSIEIYDSRGGKHNLVLTFKNVSNATTPNTWQVSARITTED 229 Query: 218 ------PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGA-------EPATFSLSF-- 262 + T+ F+ NG +++++ T++ F Sbjct: 230 PQSKKITTANGYIIGTMLFSTNGLFKSFQVSDSVDFKFPGLGVDDIGAMPNGTYTAKFEI 289 Query: 263 ------------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 L+++ Q I +QNGY GDL SY I+ G + G YSN Q + Sbjct: 290 PDVKKDTKLYLDLHAITQFNSETTIDKLSQNGYADGDLKSYAIDAAGVLTGTYSNGQNRK 349 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 + Q+ + F+N GL G N+++ T +SG G G G +T GALE SNVDLS+E Sbjct: 350 MAQVAVTTFSNPAGLFKAGSNLYTRTNNSGEPKTGQPAVGGRGAITPGALEMSNVDLSQE 409 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +MI QR +Q+N++ I D +L LVNL+ Sbjct: 410 FTDMITTQRGFQANSRIISVSDSMLEELVNLK 441 >UniRef50_Q1ZPI3 Flagellar hook protein n=3 Tax=Photobacterium RepID=Q1ZPI3_PHOAS Length = 467 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 128/468 (27%), Positives = 220/468 (47%), Gaps = 67/468 (14%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+ + A+SGL AA +L+ NNIAN+ T+GFK A F D+++ S G GV+ Sbjct: 1 MSMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF---YSRNGQFKLDENRNLVN 110 + + Q F +G++ T LD+ +S +GFF + D+ +RNG F L+ LVN Sbjct: 61 TSTVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 +G L GYP T+ ++ I + + T + +NL + + P F Sbjct: 121 SEGKFLLGYPVNKDSNTVASY-EAKSMKIDDVFGQPTKSGTIKVSLNLPNKETAPKSNSF 179 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--------NNWQVY----------- 211 + DS+NK S T++DS G + M+ Y+V D N W+V+ Sbjct: 180 DFKDPDSFNKSTSSTIYDSLGKPYKMTTYYVAKYDPNAVPTNANTWEVHQTVTNNSGEER 239 Query: 212 --------------TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEP-- 255 D++DP + T + F+ NG G + AT AI Sbjct: 240 LLKPDPTKIPPAYQVIDNTDPTAPVVTGYRMRFDQNGQPYPGDPGDPTATPAIPPTPASP 299 Query: 256 ---------------------ATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 + ++++ + Q + +G G L I+ Sbjct: 300 LNIQMETFASAGIDVGGADPTQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDID 359 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 +G ++ +YSN + ++G++ LA +N +GLA G +W+ TQ SG A+ G A G+FG+ Sbjct: 360 PEGNILASYSNGKDIVVGRVALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGS 419 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +G LE SN+D+++ELV++I AQRN+Q++++ + +Q+ ++ +R Sbjct: 420 VKSGTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQIR 467 >UniRef50_C6NYI1 Flagellar hook protein flgE n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYI1_9GAMM Length = 416 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 161/419 (38%), Positives = 242/419 (57%), Gaps = 21/419 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------SKVGLG 51 M ++ A+SGL+AA T+L+ IGNNIAN T GFK A F D++A + G+G Sbjct: 1 MGYNTAISGLDAAQTDLNTIGNNIANVNTVGFKESNAQFGDLYAASLAGSAGASTTPGIG 60 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 V ++Q+FT G TG LD+AI+ GFF + ++NG++ Y+RNGQF + N L N Sbjct: 61 VSTVDLSQNFTQGNIQTTGNPLDMAINGPGFFIV-NNNGTMDYTRNGQFHVSSNGVLENN 119 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 L + G+ + +N++I + M + T+ A++ NLN++D P+VTPFS Sbjct: 120 GDLPVQGFQPV-PGSNGRFSTILSNLTISESAMPPQATSQAALVANLNANDVPPSVTPFS 178 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-------DNNWQVY--TQDSSDPNSIA 222 ASN +SYN + V+DS GNA D+++YFV+ N W VY +SS Sbjct: 179 ASNPNSYNDSTTFQVYDSLGNAQDITLYFVQASGTGSANQPNQWDVYYSAGNSSGTTVAT 238 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 + TTL+F+ G LV G A+ +G +G+ +T S++ S N+ + + NG Sbjct: 239 GSLTTLQFSNTGQLVSGGTASFTVSGWGDGSASSTISVNLSGSTLTNS-PFAVTSENVNG 297 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 Y PG S + G + NY+N Q + +G++ LANFAN +GLA N+WSAT ++G Sbjct: 298 YAPGTYSSISVQSTGEIDANYTNGQKKAIGKVALANFANLQGLAPISGNLWSATATAGNP 357 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L+ + GT G + +GA+E+SNV LS +LV+MIVAQ+ YQ+N TIKT+ Q +L+ L Sbjct: 358 LVNSPGTAGLGVIQSGAVESSNVSLSSQLVDMIVAQQAYQANTSTIKTEQQDTQSLLQL 416 >UniRef50_UPI0001850C8F flagellar hook protein FlgE n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850C8F Length = 426 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 137/426 (32%), Positives = 207/426 (48%), Gaps = 29/426 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + +SG+ A T LDVIGNNIAN TYGFK G +F D+ + Sbjct: 4 SMYSGISGMKNAQTKLDVIGNNIANVNTYGFKKGRVTFQDLMNQTMSGATTPTENRGGQN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG +A I T G+ TGR LDVAIS +G+F + + + Y+R G F LD Sbjct: 64 AKQIGLGGTIASIDIISTQGSLQTTGRSLDVAISGDGYFVVRNGQNEM-YTRAGNFYLDS 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 N +LV+ G + GY A I G + ++ MA ++T+ + NL +S P+ Sbjct: 123 NGSLVDGNGNLIQGYQADANG-VIDYGGMTDIVIDSDSTMAPRSTSEVTFNGNLKASAPI 181 Query: 165 PTVTPFSASNADSYNK-KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT-QDSSDPNSIA 222 T + A + + +V DS G+ + V F KT N+W + + Sbjct: 182 YDATNATTQAATADGRVTVDYSVKDSLGSDIPLKVTFTKTASNSWDTTISYTDTLGATQT 241 Query: 223 KTATTLEFNANGTLVDGAMAN------NIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 T L F+++G L + + P + F + Q + + Sbjct: 242 ITGPALSFSSDGKLDPATVTTLANINLPVNNINPGAVSPQAIDIDFA-QITQFDSSTSAN 300 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 T NG G L S+ I+ G + G YSN + Q + Q+V+A F+N GL S+G N ++A+ Sbjct: 301 INTINGNSEGYLESFTISSSGEINGIYSNGEVQAISQLVMATFSNAGGLLSQGGNTFTAS 360 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG+ G A G + +G+LE SNVDLS+E MI AQR++Q+N + I T D+IL Sbjct: 361 NNSGLPNYGIANE-GRGAIQSGSLEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQ 419 Query: 397 TLVNLR 402 LVNL+ Sbjct: 420 ELVNLK 425 >UniRef50_Q9X5Y0 Flagellar hook protein flgE n=2 Tax=Rhizobiaceae RepID=FLGE_RHIME Length = 406 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 132/418 (31%), Positives = 194/418 (46%), Gaps = 29/418 (6%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GV 52 M+ VSG+NA + L + NIAN+ T G+K + F+ M S G GV Sbjct: 1 MSLYGTMRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSGGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + G TT T D+AI GFF + +NG + +R G F D NLVN Sbjct: 61 QTEVRYSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNAS 120 Query: 113 GLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G L GY + T +++ + + A +T SM NL S P+ V+ Sbjct: 121 GFTLMGYEYEAGVDPTVVVNGFDGLTRVNLASDGLIAAGSTKGSMGANLPSGAPVGDVS- 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLE 229 S+ V+DSQGN + + KTG N W + D + +++ TL Sbjct: 180 -----------TTSLVVYDSQGNTRILDFNYEKTGANAWTLEIVDRASGDALTVPPVTLA 228 Query: 230 FNANGTLVDGAMANN-----IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 FNA G L I GA + ++ F + Q A N + +G Sbjct: 229 FNAAGELTTSPATVVANGALIVPPPATGAVVGSITIDF-SKTTQLGYAFNADGGSIDGNA 287 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 P + YQI+ DG V Y N + +I LAN + + L E NV+S SGV + Sbjct: 288 PSKVAGYQIDSDGIVYVKYENGKLDPRYRIALANVQSPDKLRPESGNVYSQGVDSGVIIT 347 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G AG+G+FG + +GALE+SNVD+++EL MI +QRNY +N++ +T ++L LVNL+ Sbjct: 348 GFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLK 405 >UniRef50_Q15R85 Flagellar basal body FlaE n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R85_PSEA6 Length = 458 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 135/458 (29%), Positives = 218/458 (47%), Gaps = 56/458 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG++AA +LD NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQFKLDENRNLVNM 111 + Q F+ G+ T LD+A++ NGFF + S ++R G FKLD +VN Sbjct: 61 TQEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNS 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPTN-ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L G+P + + T + IP++ + + T+ S+++NL + D + F Sbjct: 121 NGDNLLGFPVNPDGTSSSVALSTTQAVRIPDSSGSPQPTSEVSLKMNLPAGDDAVDLDLF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFV--KTGDNNWQVYTQDS------------- 215 + + +YN SVTVFDS G++H M+ YF+ + N W V T Sbjct: 181 NPDDPLTYNAATSVTVFDSLGDSHVMTYYFMKDQAATNEWVVTTYMDDIALNTEGDTPGV 240 Query: 216 ---------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE------------ 254 + + F+A G A A+ ++ + Sbjct: 241 PPITGPNVVGETTGSPVAGYRMTFSAGGDFTSIANADGTSSATGDITSVALGGTILANGS 300 Query: 255 --PATFSLSFL--------NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 T + +F + Q A + + Q+G G L I DG V YS Sbjct: 301 DPSQTITTNFAFDPGNATPDEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATYS 360 Query: 305 NEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASN 364 N ++ + ++ L FAN++GL + + W + SG AL G A TG FG + + ALE +N Sbjct: 361 NGTSEPIIRVALVRFANDQGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQAN 420 Query: 365 VDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 V+L+ EL+++I+AQRN+Q+N++ ++ +Q+ T++N+R Sbjct: 421 VNLTTELIDLIIAQRNFQANSRALEVNNQLNQTILNIR 458 >UniRef50_A8GYL4 Flagellar basal body FlaE domain protein n=13 Tax=Gammaproteobacteria RepID=A8GYL4_SHEPA Length = 402 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 148/404 (36%), Positives = 225/404 (55%), Gaps = 8/404 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SGL A +L+ I NNIANS+T GF+SG + F+ ++ G + G GV V +Q+ Sbjct: 1 MSFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIYNGGQAG-GVNVMSTSQN 59 Query: 61 FTDG-TTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G + T TGR LD+ I GFF L +GS Y+R G F D + + + G +L GY Sbjct: 60 FSMGGSLTYTGRQLDMGIQGEGFFVLSGQDGSTSYARAGMFNQDADGYITDPAGNRLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 T Q N T++ + +AA+ T+T + NL++ + P +PF +A + Sbjct: 120 SIGATGNL--QNGNVTDLQVQTGALAAQATSTIGLTSNLDARVEVIDPATSPFDPDDAST 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 Y+ ++ FDS GN H ++ Y+VKT DN W V+ + + TLEF++NG L Sbjct: 178 YHSSSTIAAFDSLGNEHALTQYYVKTADNKWSVH-YNMDGTDVTPVGGHTLEFDSNGMLT 236 Query: 238 DGAMANNIATGAINGAEPATFSLSFL-NSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 G T A + L+ + Q N + QNGY G+L +I+D+ Sbjct: 237 TGNDITLNITDAAIIGGASNMELALSFDKSTQYAADYNNSSLNQNGYTSGELNGIRIDDN 296 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G + G Y+N Q Q+ GQ+VLA+F+N GL +N W+A+ ++G ++GT TG G L+ Sbjct: 297 GMLYGTYTNGQEQIQGQVVLADFSNPNGLVPTSNNAWTASNAAGQPIIGTPTTGTLGGLS 356 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G LE SNVD + E+VN++ AQRNYQSNA+ + T + L+N Sbjct: 357 AGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400 >UniRef50_A4C6G9 Flagellar hook protein n=2 Tax=Alteromonadales RepID=A4C6G9_9GAMM Length = 492 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 142/493 (28%), Positives = 217/493 (44%), Gaps = 92/493 (18%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SGL AA +LDV NNIAN TYGFK A FAD+F+ S + G GV Sbjct: 1 MSFNIALSGLKAAQKDLDVTANNIANVNTYGFKESRAEFADVFSTSLFSNAKTQNGEGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN--GSVFYSRNGQFKLDENRNLVNM 111 + Q F G+ T LD+AI+ NGFF DS Y+R+G FKLD + LV Sbjct: 61 TQVVAQQFHQGSLLFTSNALDMAINGNGFFVTTDSPLSRDFTYTRSGAFKLDADNRLVTA 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT-NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L G P + T I IP++ + T M NL+S+ F Sbjct: 121 GGDFLQGLPVNEDGSVKSVSLSTTAPIQIPDSAGSPSATGAVDMSFNLDSNAKALDPYKF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD------------------------- 205 + + +Y S ++DS GN+ S Y+VK D Sbjct: 181 NPLDTTTYTASTSTVIYDSLGNSRIASFYYVKVADPTTTNAAATVPGSGFDALPADPNDA 240 Query: 206 ---NNWQVYTQDSSDP------------------------------NSIAKTATTLEFNA 232 N+W +++ + D + + T L+F++ Sbjct: 241 TNANSWVMFSTVTDDAGVQKKVDLGNDLLSGGAPDARTFSTGDPVGDPTSHTGMLLQFDS 300 Query: 233 NGTLVDGAMA---------------NNIATGAINGAEPAT--------FSLSFLNSMQQN 269 +G+ V T +GA T F+++ N + Q Sbjct: 301 SGSPVASTFPVPKTEPLGTPLNVTITPPPTAPYDGASVVTNGANPDQQFNINMSN-LTQF 359 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + A I A +Q+G G L I DG + YSN Q + ++ LA F N +GL G Sbjct: 360 SSAFEITALSQDGQTVGRLTGISIGGDGLIEAKYSNGDAQAISKVALARFPNEQGLTQIG 419 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 + W+ ++ SG AL G +G FG++ +G LE +NV+L+ ELV++I AQRN+Q+N++ ++ Sbjct: 420 NTSWTPSRESGEALAGEPDSGTFGSIRSGTLEQANVNLTGELVDLIAAQRNFQANSRALE 479 Query: 390 TQDQILNTLVNLR 402 +QI ++ +R Sbjct: 480 VNNQISQNILQIR 492 >UniRef50_Q48GC0 Flagellar hook protein FlgE n=10 Tax=Pseudomonas RepID=Q48GC0_PSE14 Length = 441 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 163/444 (36%), Positives = 230/444 (51%), Gaps = 47/444 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA +LDV GNNIAN AT GFKS A FAD +A S VG GV Sbjct: 1 MSFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGV 60 Query: 53 KVAGITQDFTDGTTTN-TGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 A ++Q F+ G T T LD+AI+ NGFF L + NG Y+R G F D+ +VN Sbjct: 61 TTAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSN-NGEKLYTRAGAFHTDKEGYVVNS 119 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G++L GY + +++ + ++ + K TT + NLNS+ LP++T F Sbjct: 120 GGMKLQGYNVDANGSVV--TGALSDLRVDSSNLQPKATTAITNVANLNSTTALPSLTTFD 177 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS----DPNSIAKTATT 227 A++ SYN K S +D+QGNAH + YFVKTG N W +Y+ DP + Sbjct: 178 ATDTKSYNMKYSTPTYDTQGNAHTLDQYFVKTGTNTWSMYSLMDGRSISDPTTTTADKND 237 Query: 228 LEFNANGTLVDGAMANNIATGAI------------------------------NGAEPAT 257 L F+++G LV A A NGA A+ Sbjct: 238 LTFDSSGNLVVAAPGTVPTDSANIKFNTDGTFTVANWVPGVQSGTGTTTSWGANGATGAS 297 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 L+ + Q + ++ Q+GY G L + ++ G + Y+N ++Q++GQ L Sbjct: 298 IKLNMA-GITQTASVSGLITQDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLT 356 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 NFAN +GLA G W T +SGV + GT +G G +T ALE SNVDL+ ELVN+I A Sbjct: 357 NFANVQGLAQAGGTNWRETFASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKA 416 Query: 378 QRNYQSNAQTIKTQDQILNTLVNL 401 Q NYQ+NA+TI TQ I+ T + + Sbjct: 417 QSNYQANAKTISTQSTIMQTTIQM 440 >UniRef50_A7K5D1 Flagellar hook protein FlgE n=56 Tax=Vibrionales RepID=A7K5D1_VIBSE Length = 437 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 130/437 (29%), Positives = 216/437 (49%), Gaps = 40/437 (9%) Query: 4 SQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKVAG 56 ++SGL+AA +L+ NNIAN+ TYGFK A FAD+++ S G G + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVD---SNGSVFYSRNGQFKLDENRNLVNMQG 113 + Q F +G++ T +D+ +S GFF + + +RNG F L++ +V Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNELTRNGAFHLNKENYMVTAND 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY + + P I+IP K T + +NL ++ L T F S Sbjct: 123 EFLLGYQVDPSSGEVSSY-EPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFS 181 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFV--KTGDNNWQVY-------------TQDSSDP 218 + D+YN+ S T++DS G ++ ++ Y++ +T N W Y Sbjct: 182 DPDTYNRSTSSTIYDSMGQSYKLTTYYLKDQTQPNTWNTYYTVTDKEGEKPLNVAAGDAQ 241 Query: 219 NSIAKTATTLEFNANGTLVD------------GAMANNIATGAINGAEPATFSLSF-LNS 265 T++FN +GTL G A N +NGA+PA +L+F L S Sbjct: 242 TPTGHVGHTMKFNNDGTLASLNNGQPITSVALGDPATNTTPVDMNGADPAQ-TLNFGLGS 300 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 Q + ++G G L +++G+V+G YSN + LG++ L N +GL Sbjct: 301 ATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVMGTYSNGENVTLGRVALVRVPNEQGL 360 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +G W +TQ SG + G + G+FGT+ NG LE SN+D+++ELV++I AQRN+Q+N+ Sbjct: 361 DKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISAQRNFQANS 420 Query: 386 QTIKTQDQILNTLVNLR 402 ++++ +Q+ ++ +R Sbjct: 421 RSLEVHNQLQQNILQIR 437 >UniRef50_A6W8K5 Putative uncharacterized protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8K5_KINRD Length = 462 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 144/460 (31%), Positives = 214/460 (46%), Gaps = 61/460 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL + T +DV+GNNIAN T GFKS + FAD + Sbjct: 4 SMFSGVSGLRSHQTMMDVVGNNIANVNTAGFKSSSVVFADTLSQLTKAAGAPTDAAAGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++VGLGV+V ITQ+ T G+ TG+ D+ + +G F + +G FYSRNG F LD Sbjct: 64 PAQVGLGVRVNAITQNMTQGSAQATGKSTDLMLQGDGMFAIQQGDG-TFYSRNGSFTLDA 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 N ++V G + G+ A G + +T+M A TT A + N++ + Sbjct: 123 NGSVVTNDGGYVMGWKADAAGAVNTNGQIGKLVIPSDTVMPAVATTEAKFKGNIDRTFKT 182 Query: 165 PTVTPFSASNADSYNK----------KGSVTVFDSQGNAHDMSVYF-------------- 200 PT P + + S + +D QG A + V F Sbjct: 183 PTALPAADQYVTGSSPGDGVIKGTAVTSSFSSYDDQGIATKVFVTFTNDVNYTAATAAST 242 Query: 201 ------------VKTGDNNWQVYTQDSSDPNSI-----AKTATTLEFNANGTLVDGAMAN 243 V N W V DS+ + TA T+EF+ +G Sbjct: 243 DANGVVTPAKAAVYEPTNVWHVKAVDSNGKEVVLKKADGTTAETVEFDPDGAAKGTNSMV 302 Query: 244 NIATGAINGAE-PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 GA A+ + L+ L S TG +N+ +G G L + DG + GN Sbjct: 303 ATVEGAGTKADSTVSLDLTGLTSYVGTTGTSNVNPVA-DGAPIGTLTGFSFGTDGVITGN 361 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 YSN Q LGQI +A+F N+ GL EG++++S + +SG + G AG+ G++ G+LE Sbjct: 362 YSNGYKQTLGQIAIASFNNSAGLRKEGNSLYSVSTNSGQPVFGIAGSAGRGSILAGSLEM 421 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS E N+I+AQR +Q+N++ I + D++L LVNL+ Sbjct: 422 SNVDLSAEFTNLILAQRGFQANSKVITSSDELLQDLVNLK 461 >UniRef50_Q3J1S9 Flagellar hook protein FlgE n=5 Tax=Rhodobacter sphaeroides RepID=Q3J1S9_RHOS4 Length = 423 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 130/430 (30%), Positives = 215/430 (50%), Gaps = 36/430 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+ + A+SGL+AA ++ +NIAN T GF+ A FAD+F S VG GV+ Sbjct: 1 MSINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG------SVFYSRNGQFKLDENRN 107 F+ G+ TG LD+AI GFF + G Y+R G F L+ Sbjct: 61 TLRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGV 120 Query: 108 LVNMQGLQLTGYPATGTPPTIQQ-GANPTNISIPNTLMAAKTTTTASMQINLNSS----- 161 +N G +L +P + + Q + T ++IP T+ + T+T ++ ++L + Sbjct: 121 AINASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLG 180 Query: 162 --DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-------NNWQVYT 212 +P F ++ +Y +V +FD++GNA + + YF+KT + +W V Sbjct: 181 TQAAVPPAAAFDPADPTTYAAVTAVPIFDAKGNAVEAAAYFIKTANPTAGNPQTDWAVRL 240 Query: 213 QDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 + +P + L F+A G L G A + A ++++L L Q + Sbjct: 241 VVAGEP--LTPAQGDLTFDATGALSGGTGALSFT-----AASGSSYTLD-LTETQLADRS 292 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 + +Q+G L S +++ GTV Y +GQ+VL FAN + L G + Sbjct: 293 FEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVAMGQVVLVTFANPQALRQLGASG 352 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 ++AT SG + GTAG FG + GALE +NVDL++ELV++I AQRNYQ++A+ ++T + Sbjct: 353 FAATADSGQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITAQRNYQASAKAMETSN 412 Query: 393 QILNTLVNLR 402 ++ T++N+R Sbjct: 413 SLMQTIMNIR 422 >UniRef50_A6X6N9 Flagellar basal body FlaE domain protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X6N9_OCHA4 Length = 426 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 116/410 (28%), Positives = 198/410 (48%), Gaps = 22/410 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF---AGSKVGLGVK 53 M+ VSG+NA A L + +NIAN++T G+K F+ + G + G Sbjct: 30 MSLYGMMRTGVSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQYNSGSV 89 Query: 54 VAGITQDFT-DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + + + G +T D+AI NG+F + ++GS F +R G F D+N NLVN Sbjct: 90 LTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGADGSTFLTRAGSFVPDKNGNLVNSA 149 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L G + A I++ + + + +T+ + +NL S+D +P Sbjct: 150 GYYLLGAGPNDPAGALTM-AGLNIINVNSAALPPEASTSGNFTVNLPSTDQIPA------ 202 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 A +N K S+ ++ +G + VYF KTG + W V ++++D +++ TTL F+ Sbjct: 203 --AGEFNHKTSLISYNDKGEKITLDVYFTKTGADEWSVTVKNAAD-DAVVGGPTTLTFDP 259 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 + A + G +L+ L + Q G I NG P + Sbjct: 260 TTGDMTSAGGVAVDLGPYG---GQNLNLN-LGASTQRAGDYTISQAQINGQAPSAVKGVD 315 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 + +DG+VV Y N ++L +I LAN A+ + + NV+ + SG LG + Sbjct: 316 VANDGSVVAIYENGTQKVLARIPLANVASPDRMTVVSGNVFLPSADSGDVRLGFPQSDGM 375 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SN D+++EL +MI AQR+Y +N++ +T ++++ LVNL+ Sbjct: 376 GKVMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLK 425 >UniRef50_B8KBZ1 Flagellar hook protein n=6 Tax=Vibrionaceae RepID=B8KBZ1_VIBPA Length = 438 Score = 297 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 125/437 (28%), Positives = 217/437 (49%), Gaps = 39/437 (8%) Query: 4 SQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKVAG 56 A+SG++AA +L+ NNIAN+ T+GFK A F D+++ S G GV+ Sbjct: 3 YVALSGISAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAQK 62 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVD---SNGSVFYSRNGQFKLDENRNLVNMQG 113 + Q F +G++ T +D+ IS GFF + + + +RNG F L+++ +V Sbjct: 63 VAQQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTAND 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY G + P+ I+IP K T+ + +NL + L F S Sbjct: 123 EYLLGYQVNGDTGDVLSY-EPSPINIPKEFGKPKQTSNIEVGVNLPAGGDLKDPALFDYS 181 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFV--KTGDNNWQVYTQD-------------SSDP 218 + ++YN+ S T++DS G ++ ++ Y++ +T N WQ Y Sbjct: 182 DPETYNRSTSSTIYDSMGQSYKLTTYYLKDQTQANTWQTYYTVTDSAGEKPVNILGGDAT 241 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGA---EPATFSLSF----------LNS 265 T++FN +GTL NNI +G + G +P +L+ L+S Sbjct: 242 TPTGHVGHTMKFNNDGTLASLNSGNNIVSGPLGGTGPDDPNAINLNGADVSQTLSFGLDS 301 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 Q + ++G G L +++G+V+G YSN + LG++ + AN +GL Sbjct: 302 ATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVLGTYSNGENITLGRVAMVRVANEQGL 361 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +G W +TQ SG + G + G+FG++ +G LE SN+D+++ELV++I AQRN+Q+N+ Sbjct: 362 DKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQSNIDMTQELVDLITAQRNFQANS 421 Query: 386 QTIKTQDQILNTLVNLR 402 ++++ +Q ++ +R Sbjct: 422 RSLEVHNQTQQNILQIR 438 >UniRef50_Q11LP2 Flagellar basal body FlaE n=7 Tax=Alphaproteobacteria RepID=Q11LP2_MESSB Length = 422 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 121/426 (28%), Positives = 193/426 (45%), Gaps = 29/426 (6%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GV 52 M+ VSG+NA A L + +NIANS+T G+K T F+ + G GV Sbjct: 1 MSLYGMMKTGVSGMNAQANRLSTVADNIANSSTNGYKRATTEFSTLVVPGTQGSYNSGGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 G T D+A++ +GFF + SNG + +R G F LD + LVN Sbjct: 61 TSTVRNAVSAQGVLQYTTSITDLAVNGSGFFIVQGSNGQPYLTRAGSFVLDGDGRLVNSS 120 Query: 113 GLQLTGYP-ATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV--- 167 G QL GY A GTP G A I+I + A + NL + Sbjct: 121 GYQLMGYSYANGTPSATANGYAGLEPITIKQPELVATPSRNGVFSANLPLDAEIVDTGAG 180 Query: 168 --TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA 225 T ++ Y+ K S+ + ++G + VYF KTGD+ W+V D +D Sbjct: 181 QSTAGDNTSTSEYSVKTSLVAYGNRGEQVLLDVYFTKTGDDEWEVAVFDRADATPDTGFP 240 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF---------LNSMQQNTGANNIV 276 A+G L + + TG + G ++ L+ + Q + Sbjct: 241 Y-----ASGPLATDQLTFDPTTGKLTGTSVTGVTIPVPGGDDLELDLSQLSQLDSGFQVY 295 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 +G P + S +I+ +G V Y++ + L +I LAN + + L N ++ T Sbjct: 296 DAEVDGTPPTSIDSIEISAEGIVYAQYADGSFKPLYRIPLANVTSPDQLEVLSGNAFAET 355 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG +G AG+ G + +GALE+SNVD+++EL +MI +QR+Y +N++ +T ++ Sbjct: 356 AASGAVRIGFAGSDGLGDIASGALESSNVDIAEELTSMIESQRSYTANSKVFQTGSDLME 415 Query: 397 TLVNLR 402 LVNL+ Sbjct: 416 LLVNLK 421 >UniRef50_C6XF46 Flagellar hook protein FlgE n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF46_LIBAP Length = 421 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 101/416 (24%), Positives = 181/416 (43%), Gaps = 16/416 (3%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGI 57 + A+SG++A + + + +NIAN T G+K +F+ + + S V G++++ Sbjct: 6 SMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGLEISTK 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 G+ +T D+AI GFF + + +R G F ++ L N+ G L Sbjct: 66 DMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVLL 125 Query: 118 GYPATGT--PPTIQQGANPTNISIPNTLMAAKTTTTASMQINL--NSSDPLPTVTPFSAS 173 GYP P + I++ + ++A TTT + NL N++ P TP Sbjct: 126 GYPLKNASAPLIVNSFQGLERINVKHAELSAMPTTTGFISNNLDKNATIITPDKTPKHNG 185 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-------TQDSSDPNSIAKTAT 226 Y K S +D+ G++ VY+ KTGD W+V T +S N Sbjct: 186 RDAEYTHKSSFAAYDTLGSSVVYDVYYTKTGDKKWEVSIFRQDQSTNNSFPYNVAPLNTV 245 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 + F+ + + I+ ++ ++ Q G + NG+ PG Sbjct: 246 EVSFDPVTGYLANSSHKAISFNDNTSGIDQQITID-ISKTTQLAGGFIPQKSEINGHAPG 304 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 + ++ DG V Y + + ++ +A + + L N + T+ SG +G Sbjct: 305 KPKDFSVSKDGYVDIIYDDGTRVPIYRLAIATVPSEDNLKLFDGNTYLPTRDSGDISIGF 364 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G + +GALE +NVD++ EL +I AQRNY N++ +T ++ L++L+ Sbjct: 365 PGHNQHGEIFSGALETANVDIASELTELIEAQRNYAVNSKVFQTGSDFMDILISLK 420 >UniRef50_Q8K9K6 Flagellar hook protein flgE n=4 Tax=Buchnera aphidicola RepID=FLGE_BUCAP Length = 409 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 149/413 (36%), Positives = 240/413 (58%), Gaps = 15/413 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-----FAGSKVGLGVKVA 55 M+ + ++GL +D++ NNIAN++T GFKS T SF D+ ++ + GV ++ Sbjct: 1 MSIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGIS 60 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQ 115 + Q+F+DG T R LD+ I Q+GFFR++DS G V+Y+RNG F LD+N+N+VN QG+ Sbjct: 61 NLVQNFSDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMY 120 Query: 116 LTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 LTG + +N I++ + L++AK T+ ++ +L + + Sbjct: 121 LTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKLKADLINDFSSTNSITGKNDD 180 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD---PNSIAKTATTLEFN 231 + ++ +T++D N H +++ F + D+ W++ Q + + N I L+F+ Sbjct: 181 ISN-SEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFD 239 Query: 232 ANGTLVDGAMANNIATGAINGA-EPATFSLS-FLNSMQQNTGANNIVATTQNGYKPGDLV 289 + G L+ + + + N +P T +L FL + N + + +QNGY G L Sbjct: 240 SEGNLISNSSLQIKSKNSKNIILDPITLNLECFLEKSETNMPS---IELSQNGYTKGFLK 296 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 ++I ++G ++G Y+NE+ Q +GQI LA F N E L E ++WSAT SG +G AG Sbjct: 297 HFEILNNGEIIGQYTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGD 356 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+L LE+SNVDL+KEL+NMI+AQRNYQS+AQ KT+D+I+NTLVNL+ Sbjct: 357 QGFGSLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVNLK 409 >UniRef50_Q1IR53 Flagellar basal body FlaE n=2 Tax=Acidobacteria RepID=Q1IR53_ACIBL Length = 409 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 144/419 (34%), Positives = 209/419 (49%), Gaps = 33/419 (7%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----------KVGLGV 52 FS +SGL A++T L I NN+AN T G+K A F D+F +VG G Sbjct: 4 FSIPLSGLTASSTALATIANNLANQNTIGYKQTRALFRDLFYQQIGQTGSGDPIQVGAGT 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + I +FTDG+ + TG DVAI +GFF + NG+ Y+R G FK+ + L Sbjct: 64 MIGTIDTNFTDGSVSPTGVPTDVAIMGDGFF-VAQQNGNDIYTRAGNFKVGADGTLRTQD 122 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G + GY A T G N+ + + TT+ + NLN+S + Sbjct: 123 GAVVLGYQAVDGKVTTGSGLGALNLG-QGQVSSPSATTSLQLTTNLNASAKVGD------ 175 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI--AKTATTLEF 230 + S+ V+DS G H ++ F KTG N W + ++ + TL F Sbjct: 176 ------SYNTSLKVYDSLGGVHVVTFTFTKTGTNTWDYDASLPTGEGTVSLPSGSHTLTF 229 Query: 231 NANGTLVDGAMANNIA-TGAINGAEPAT------FSLSFLNSMQQNTGANNIVATTQNGY 283 +++G L + N TG +GA + + +SM Q + AT Q+GY Sbjct: 230 DSDGKLTTPSSNINFDLTGLSDGASDMKGVTWKLYDATGGSSMTQMAADSATPATAQDGY 289 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L ++ I DGT+ G +SN +T ++GQI +A+F N +GL G N + T +SG A Sbjct: 290 GSGMLQNFNIGADGTIEGTFSNGKTSIIGQIAIASFPNVQGLRKVGQNAYVGTLASGQAA 349 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LG G+G GTL GALE SNVD++ E N+IVAQR YQ+NA+ I T D+I +NL+ Sbjct: 350 LGAPGSGGRGTLGGGALELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTINLK 408 >UniRef50_A6F9Q0 Flagellar hook protein n=2 Tax=Gammaproteobacteria RepID=A6F9Q0_9GAMM Length = 437 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 140/442 (31%), Positives = 217/442 (49%), Gaps = 49/442 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++S +SGL + L+VI NIAN T GFKSG A F+ +++G G GV+VA I+ + Sbjct: 1 MSYSIGLSGLRSTNEQLNVISQNIANVNTSGFKSGRAEFSSVYSGGSAG-GVEVAAISSN 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F DG NTGR +D+AIS GFF ++++ G Y+R G F + + + G +L GY Sbjct: 60 FDRDGDVVNTGRSMDLAISGRGFF-VLNNGGETSYTRAGSFVRNASNYIETSSGARLQGY 118 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS-NADSY 178 P + +++ + + AK +++ NL + P + D Y Sbjct: 119 PVDANGALL--SGVISDLKVGTGTLPAKASSSVEFAANLKADAAAPATAFDPTNIQPDMY 176 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVK------------------------------------ 202 N S VFDS G H ++ YFVK Sbjct: 177 NYSQSGKVFDSLGREHVLTQYFVKQVPGPAVTAVAAKPAVIADPTATPKVIGSPEVKAVA 236 Query: 203 ----TGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATF 258 T +N W V+ T TL F+ +G + + ++ A+P + Sbjct: 237 ARGITVENEWDVHYFIDGQKAGTTAT-QTLNFDTSGNITSPTGSVELSQTITG-ADPLSI 294 Query: 259 SLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 +S N M QN + ++ NGY GDL + +I+DDG++ G Y+N Q +L G+++LAN Sbjct: 295 KISMTN-MSQNAASFSLSRNETNGYGAGDLKTIRIDDDGSLYGVYTNGQDKLQGKVILAN 353 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 FAN GL + W + +SG +G +G G+LT+GA E SNVDL+ ELV+++ AQ Sbjct: 354 FANPNGLRQGDNTTWGQSFASGAPTVGLPSSGTLGSLTSGAYEGSNVDLTGELVSLMTAQ 413 Query: 379 RNYQSNAQTIKTQDQILNTLVN 400 RNYQ+N++TI +++ L N Sbjct: 414 RNYQANSKTISAAEKMTQVLFN 435 >UniRef50_A1UTT0 Flagellar hook protein FlgE n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTT0_BARBK Length = 404 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 120/407 (29%), Positives = 180/407 (44%), Gaps = 17/407 (4%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK----VGLGVKVAGIT 58 +VSG+NA L I N+AN+ T G+K F++ S V GVK Sbjct: 7 MHTSVSGMNAQGKRLSGIAENVANAGTVGYKRTNVQFSNYVTPSGDYAYVPGGVKSHVGH 66 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTG 118 G TGR D I+ NGFFR+ D NG+ F +R G F D++ L N G L Sbjct: 67 DISIYGPARATGRPGDAMINGNGFFRVEDENGNEFLTRAGSFSRDKDGYLRNSSGHYLL- 125 Query: 119 YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSY 178 IQ PT++ + TT + N ++S + SY Sbjct: 126 ---NDEGQRIQIRGGPTDL------FGPEVTTGIDFKANFDASAESLGEGVIDPEDPKSY 176 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVD 238 N+K SVTV+DSQG + Y KT DN W V + A E N L D Sbjct: 177 NQKKSVTVYDSQGKKVQVDFYMRKTADNKWTVDAYHGDNKVGTADFNFDKEGNLQAPLPD 236 Query: 239 GAMANNIATGAINGAE-PATFSLSFL--NSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 + G +L L +S+ G + NG + G + Sbjct: 237 FTLTLPENDGGDPPGTFQVAINLGGLGEDSLVTQKGNSYAFEAEANGMEVGSFDGFTFGK 296 Query: 296 DGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTL 355 +G V Y+N++T+++ + LA + E L V+ +G ++G G G FG+L Sbjct: 297 NGEVEVKYTNQKTRVISYVGLATVTSPESLTVLSGTVFQTNTRTGAQMVGRPGDGVFGSL 356 Query: 356 TNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T G LE SNV++S+EL +MI +QRNY +N++ +T ++++ +VNL+ Sbjct: 357 TAGYLEDSNVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVNLK 403 >UniRef50_A6CQ97 Flagellar hook protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQ97_9BACI Length = 396 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 130/420 (30%), Positives = 192/420 (45%), Gaps = 45/420 (10%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------------- 46 +SG+ T LDVIGNNIAN TYGFK G +F D + Sbjct: 1 MYSGISGMKNFQTKLDVIGNNIANVNTYGFKKGRVTFKDTMNQTISGASAAQEARGGRNP 60 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN 105 +VGLG ++ I T + +TGR LD+AI+ +G+F + + FYSR G F LD+N Sbjct: 61 MQVGLGSTLSTIDTIHTQSSLQSTGRPLDLAINGDGYFVVKQGDAQ-FYSRAGNFYLDDN 119 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPL 164 LVN G+++ Y + +I + N + AK T + SM NL++ Sbjct: 120 GTLVNGDGMKVQSY----------ENGVLQDIKVNVNAQLPAKITESISMFGNLSN---- 165 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 A + + ++ +V D + DM + T W + + + + Sbjct: 166 ------DAVGNEPFVQQINVVTNDGKQITLDMKLTPQGTPSTKWGMEFINQNGDTPLNSA 219 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQ--NTGANNIVATTQNG 282 A L+F G VD A + T +L+ Q N G + A +G Sbjct: 220 AYVLDF---GNPVDPAANPPNVDLPYTDSNGITQNLNVTMDYTQLTNLGGDLSAAADPDG 276 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G L S+ I G + G YSN + +G + LA F+N GL G N + + +SG Sbjct: 277 NTAGSLESFNIGSMGEINGVYSNGEITTIGYLALAKFSNPSGLTKAGGNSFQQSVNSGTP 336 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + AG GT+ +G+LE SNVDLS+E MI AQR +Q+N + I T D+IL LVNL+ Sbjct: 337 NVNVAGE-GRGTIVSGSLEMSNVDLSEEFTEMISAQRGFQANTRIITTSDEILQELVNLK 395 >UniRef50_Q5ZW68 Flagellar hook protein FlgE n=5 Tax=Legionella RepID=Q5ZW68_LEGPH Length = 437 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 150/442 (33%), Positives = 226/442 (51%), Gaps = 45/442 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M F+ A+SG+ A+ +L+VIGNNIANSAT GFK A FAD+++ S VG GVK Sbjct: 1 MVFNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGSNAVGGGVK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + Q F GT + + LD+A++ +GFF L D G+ Y+R GQFKL+ +VN Sbjct: 61 LSRVHQSFATGTLSTSNNTLDLAVNGSGFFILSD-QGAKIYTRAGQFKLNNENYIVNANN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTG ++ I + + ++ S+ +NLNS P V + Sbjct: 120 QRLTGLLTDSNGAITGASG---DLRINTANITPRASSNVSVGVNLNSQSKAPNVDWVGGA 176 Query: 174 NA--DSYNKKGSVTVFDSQGNAHDMSVYFVKTG----------------DNNWQVYTQDS 215 + D+YN S T++DS GN+H +S+YF+ +N W V Q Sbjct: 177 SPATDTYNNVTSSTIYDSLGNSHVLSMYFIHADSTALAGSPNAASPAGTENQWYVAFQID 236 Query: 216 SDPNSIAKTATTLE------FNANGTLVDGAMANN---------IATGAINGAEPATFSL 260 + A FN++G+ +N ++ NG+ P ++ Sbjct: 237 NQNVPPNVGAQNTNNLFRANFNSDGSFAGVFDTSNAALPNNLIPLSFNLNNGSSPLNLNI 296 Query: 261 SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 +S Q + + NGY G L I+D G + G Y+N Q+ +GQI LANFA Sbjct: 297 DLSDS-TQFGSPFAVQSAYNNGYTTGSLAGLDIDDSGMIYGRYTNGQSLAMGQIQLANFA 355 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 + E L + G+ W+ T +SG L+ G+G G + +G LE SNVDL+ ELV +I AQRN Sbjct: 356 DPESLQNIGNTSWAETTASGQPLISAPGSGGLGLINSGRLEESNVDLTGELVKLINAQRN 415 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 +Q+NAQTI+T D I T++N+R Sbjct: 416 FQANAQTIRTGDAITQTIINIR 437 >UniRef50_O52070 Flagellar hook protein flgE n=37 Tax=Rhizobiales RepID=FLGE_BRUAB Length = 396 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 117/410 (28%), Positives = 189/410 (46%), Gaps = 23/410 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG---LGVK 53 M+ VSG+NA A L + +NIAN++T G+K F+ + S G G Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60 Query: 54 VAGITQDFT-DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + + + G +T D+AI NG+F + GS + +R G F D+N +LVN Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSA 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L G A + A +++ + A+ +T +NL S+D P Sbjct: 121 GYYLLGAGADEAAGGLTV-AGLNVVNVNAAALPAEGSTAGDFTVNLPSTDQAPA------ 173 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 A YN K S+ ++ +G + VYF KTG + W V ++++D I T L F+ Sbjct: 174 --AGGYNHKTSLISYNDKGEKITLDVYFTKTGADEWNVSVKNAADGVEIGTT--VLNFDP 229 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 + + GA T +L+ L Q G I NG P + Sbjct: 230 TTGDLVSGGNVAVNLGAYG---GQTLNLN-LGGSTQRAGDYTISQAVINGQAPSSIKGVD 285 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 + +DG VV Y N ++L +I LAN A+ + + N++ + SG LG Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SN D+++EL +MI AQR+Y +N++ +T ++++ LVNL+ Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLK 395 >UniRef50_B6R7Z8 Flagellar hook protein FlgE n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7Z8_9RHOB Length = 397 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 122/413 (29%), Positives = 194/413 (46%), Gaps = 35/413 (8%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGSKVGLGVKVAGI 57 + +VSG+NA + L + +NI+N+ T G+K +F+ + +G + G+ V + Sbjct: 7 MNTSVSGMNAQSNKLSTVADNISNANTVGYKRYKTAFSSLVGSGGTSGHESGI-VNTTVV 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 G T RG D+AI+ GFF++ DS GS +Y+R G F LD+N +VN G +L Sbjct: 66 QTVRQQGAFNFTSRGTDLAINGKGFFQVQDSQGSTYYTRAGDFVLDKNGQMVNSGGYKLL 125 Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADS 177 A +++ + ++ + +NL SS P+ T P N D Sbjct: 126 -------------SAGGAPVTVDLNTPVWQASSEGELGVNLASSTPVRTGAPSYPGNFD- 171 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS--------DPNSIAKTATTLE 229 K SV+ +D GN + + + K G N DS+ D + L Sbjct: 172 --YKTSVSAYDQNGNVVKIDLVYSKIGQNMTGSTVDDSTWKVQAYNQDTPPVELANVDLV 229 Query: 230 FNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 F+ +GTL G+ T T +L ++ ++ +GY P + Sbjct: 230 FDGDGTLQTGSPDELAFTVPNGE----TLTLDLSKTVT-AGDKFSVNKVDVDGYGPSTIK 284 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 + +I DG V G Y +LL QI + NF+N +GL ++ NV++AT +SG +G G Sbjct: 285 TIRIEADGRVFGVYEGSAEKLLDQIQIVNFSNPDGLQAKSGNVYAATDASGDPAVGFPGD 344 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+L +GA+E SNVDL+ EL M+ AQR Y +N + ++L L NLR Sbjct: 345 NGFGSLYSGAVEGSNVDLAAELTEMVQAQRTYSANTKVFNASSELLQELNNLR 397 >UniRef50_Q2KCE1 Flagellar hook protein n=27 Tax=Alphaproteobacteria RepID=Q2KCE1_RHIEC Length = 434 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 128/428 (29%), Positives = 195/428 (45%), Gaps = 27/428 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GVKVAGI 57 + AVSG+NA A L + +NIAN T G+K+ + SF+ + S G GV+ + Sbjct: 6 SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGVQTSVR 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 G + T D+AIS +GFF + +G+ +R G F+ D+ NLVN G QL Sbjct: 66 QAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQLM 125 Query: 118 GYPATGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS---- 171 GY P + +++ + A +T+ + NL+S + V P + Sbjct: 126 GYSYDSGAPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSGANIAPVAPATLPSA 185 Query: 172 -ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----------DNNWQVYTQDSSDPNS 220 A+ + KK S+ +D GN YF KT + W+V ++D + Sbjct: 186 NAATTTADTKKFSMVAYDHLGNKVMYDFYFTKTSVVTPPPATGTASTWEVAVFRNADAAT 245 Query: 221 IAKTATTLEFNA-----NGTLVDGAMANNIATGAINGAEPAT-FSLSFLNSMQQNTGANN 274 T+ A +G L + GA+ A+ S++ S GA Sbjct: 246 GGTTSFPYTGGAGAVVASGNLTFDRNGKMLTGGALPIADTKNALSINMDLSGFTQLGAAF 305 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 T NG + I+ DG V Y + T+ L +I LAN A+ + L NV+S Sbjct: 306 AGTGTPNGQAASPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYS 365 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 A SGV + G T GT+ +GALE SNVDL+ EL MI AQR+Y +N++ +T I Sbjct: 366 ANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDI 425 Query: 395 LNTLVNLR 402 ++ LVNL+ Sbjct: 426 MDVLVNLK 433 >UniRef50_A6DYV2 Flagellar hook protein FlgE n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYV2_9RHOB Length = 419 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 134/426 (31%), Positives = 208/426 (48%), Gaps = 32/426 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F A+SGLNAA T++ V NNIAN T GF A FAD++ S++G G + Sbjct: 1 MSFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSRPASQIGSGTE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV---DSNGSVFYSRNGQFKLDENRNLVN 110 V+ I DF G+ T TG LD+++ GFF++ D+ Y+R G F ++ + N Sbjct: 61 VSRIGVDFKQGSLTATGNVLDLSLQGPGFFQVRTGPDAGADAGYTRAGAFGMNREGFVTN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP------- 163 G LT +P + T+ + IP + TT + NL+ S+ Sbjct: 121 AAGHFLTVFPTSENGDTL-STTQTQRLQIPQQFGTPQATTAVDLSFNLSLSNNGGLGAQA 179 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN-------WQVYTQDSS 216 F ++ +Y + V D+ G A YFV + + + V Sbjct: 180 AIPAAAFDPADPTTYAATTQIPVLDAAGRAVPAQAYFVMSDAPDALDGGLAYTVQLVVDG 239 Query: 217 DPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 + TL F+A G G A N G SLS L + + G + Sbjct: 240 VITAPTDPLATLSFDAGGAQTGGLEAMNFDFGEQ------ALSLS-LGGSRVSEGPFGAI 292 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 A +QNG + DL S + DGTV +Y E + +GQ+ +ANF++ +GL S G + A+ Sbjct: 293 AVSQNGTRQLDLSSVDVRQDGTVWASYGAETSVAVGQVAVANFSDIQGLGSIGSATYRAS 352 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 + SG LG GT FG + G++E SNVDL+++LVN+I+AQRNYQ++A+ ++T + + Sbjct: 353 RESGDVRLGVPGTSGFGAIRAGSVERSNVDLTEQLVNLIMAQRNYQASAKALETNGTLAD 412 Query: 397 TLVNLR 402 T++N+R Sbjct: 413 TVLNIR 418 >UniRef50_B1M7H7 Flagellar basal body FlaE domain protein n=8 Tax=Alphaproteobacteria RepID=B1M7H7_METRJ Length = 407 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 122/411 (29%), Positives = 189/411 (45%), Gaps = 22/411 (5%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGIT 58 VSG+NA + L + +NI N T G+K + F+ + GS V Sbjct: 7 LHAGVSGMNAQSNRLGTVADNIQNQNTTGYKRASTEFSSLLIDPSPGSYDAGSVDTVVRH 66 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN-RNLVNMQGLQLT 117 + +GT T T D+ I NGFF + D +G + +R G F +D +LVN G++L Sbjct: 67 RISEEGTGTATNSPTDLTIKGNGFFVVKDGSGRSYLTRAGNFVVDGQTGDLVNAAGMRLQ 126 Query: 118 GYPATGTPPTI--QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNA 175 GY P++ N+++ M +T +++ NL S P+ A+N Sbjct: 127 GYSLANGEPSVSLNSFDGMMNVNVAKLAMKTSPSTAGTLEGNLFSDTPI-------ATNP 179 Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA----TTLEFN 231 Y+ K S+T +D+ G+ +YF KT +N WQV D+S P + T TTL FN Sbjct: 180 PGYSLKSSITTYDNLGHPFKADLYFAKTANNTWQVTAYDASLPGNYPGTPLGGPTTLTFN 239 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 A G + N + +P T LS L+ + ++I A + NG + Sbjct: 240 AFGQIAGAPKLNFT----VPNGQPFTLDLSPLSQVADVAQVSDIKARSVNGNAASAVEGA 295 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 I+ DGTV Y + + +I +A+ + + L NV+ SG A +G A G Sbjct: 296 DIDTDGTVYAIYRDGSRRAAFRIPVASVGSPDNLTPRAGNVFDVNPESGPAQIGFANVGG 355 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + + LE S VDL EL MI AQ Y +N++ +T ++L LVNL+ Sbjct: 356 RGHIQSKMLENSTVDLGNELATMIEAQTTYGANSKVFQTGSEMLELLVNLK 406 >UniRef50_C7LUH2 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUH2_DESBD Length = 513 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 133/507 (26%), Positives = 215/507 (42%), Gaps = 106/507 (20%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + +G+ A N+ VI +NIAN +T GFKS F + + ++VG GV Sbjct: 6 SLYIGTTGIMAQQKNMAVISDNIANVSTVGFKSSHMIFNTLMSQQMGSASVSNQVGQGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-DSNGSVFYSRNGQFKLDENRNLVNMQ 112 V+ I D + G T D++IS GFF + + + Y+R G F+ D L + Q Sbjct: 66 VSSILYDMSLGALEPTNTATDISISGKGFFIVSPNGSSDQHYTRAGNFRFDAEGYLRDPQ 125 Query: 113 GLQLTGYPA-------TGTPPTIQQGANPTNISIP-----NTLMAAKTTTTASMQINLNS 160 G L GY T A T+I + + + TT M INL+S Sbjct: 126 GNILQGYRMPAESILDTAPVIPPAASAPITDIRLDMQDGGGPVSEPEATTEMRMMINLDS 185 Query: 161 SDPLPTVTPFS---------------ASNADSYNKKGSVTVFDSQGNAHDMSVYF----- 200 S + + S +A +Y+ + ++ ++DS G AH++ YF Sbjct: 186 SSQERSTSTTSPFTALFDSWDATQPEPLDAGAYSYQSAMKIYDSDGGAHEVRAYFDPVQD 245 Query: 201 ---VKTGDNNWQVYTQDSS-------DPNSIAKTATTLEFNANGTLVDGAMANNIATGAI 250 V +G+ W+ D TL F A+G L++ + + Sbjct: 246 GASVPSGNRMWEFLVTIPPTQDASGLDTKKGVLMTGTLTFTASGELLNMSAFEGSSDDKN 305 Query: 251 N-------------------GAEPATFSLSF-------------LNSMQQNTGANNIVAT 278 + GAEP + +L +N++ A + + + Sbjct: 306 SWVPVNLSEDGYPVLNVNLVGAEPISSALDMGLRSNSGWALPAGVNTLADLGTAISDLPS 365 Query: 279 TQN-----------------------GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 QN GY+ G L S ++ G +VG +SN Q Q L +I Sbjct: 366 LQNADRQILSITNFNSGSSTLYQSQNGYERGFLQSVSVDTAGVLVGYFSNGQNQGLYKIP 425 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 +A+F N +GL EG N++SAT+ SG +G AG G G++ +LE SNVDL+ E VNMI Sbjct: 426 MADFINPQGLFREGGNLFSATKDSGAVSVGWAGEGRLGSVITSSLENSNVDLATEFVNMI 485 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 + Q+ + +N++ I T DQ++ T + ++ Sbjct: 486 ITQKGFDANSKVITTGDQVVQTAIQMK 512 >UniRef50_B6AMB9 Probable flagellar hook protein FlgE n=2 Tax=Leptospirillum sp. Group II RepID=B6AMB9_9BACT Length = 457 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 131/460 (28%), Positives = 205/460 (44%), Gaps = 74/460 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------SKVGL 50 + A SGLNA T++ VIGNNI N T GFK G A FA+++ S+ G Sbjct: 6 SMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQPGS 65 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V I Q+FT G+ + LD+AI NGF + +G FY+RNG+ LD+ +V+ Sbjct: 66 GVYVDAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRIVD 125 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 L GY ++I +P T + K T +INL++ Sbjct: 126 TSNRALQGYMNKNGKIQPI----LSDIRVPQTTVPPKATQNVFSRINLDAGMTEKLKEGR 181 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY--TQDSS------------ 216 + S +FDS G H ++ F+ T + T D + Sbjct: 182 --------EFEKSSNIFDSLGIQHLLTYKFIPTSVAGQWAFQATMDGASLTKGGGSISYP 233 Query: 217 -----DPNSIAKTATTLEFNANG-------------------------TLVDGAMANNIA 246 P ++ ++F+ NG T + A ++ Sbjct: 234 PLGRKTPKTLKGIVGLIQFDGNGIVKSVNYGGSPLKRDANGVVHALYQTTLADKAATPVS 293 Query: 247 TGAINGAEPATFSLSFLNS-------MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + + T + +N + Q ++ + TQ+G+K GDL + I+ DG + Sbjct: 294 FDVVIPTKGQTIRPNRINGVTQQVLQLTQFNAPSSTIEETQDGHKSGDLNNLAISRDGKI 353 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 VG++SN ++LG + +A+F N GLAS G N + + +SGV G G G G L + + Sbjct: 354 VGSFSNGVQKVLGVVSIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNS 413 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 LE S DL +++V+MI A+R YQ++A I T + ILNTL+ Sbjct: 414 LELSTTDLGRQMVDMITAERGYQASASIIATDNTILNTLL 453 >UniRef50_C6QF26 Flagellar basal body FlaE domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF26_9RHIZ Length = 417 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 122/414 (29%), Positives = 195/414 (47%), Gaps = 20/414 (4%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSKVGLGVKVAGIT 58 + ++SG+ + + + +NIAN T G+K +A FA + A S V V Sbjct: 7 MTTSISGMAVQSDRMGTVADNIANVNTTGYKEASAEFATLVAEGHVASYVPGSVSTIARR 66 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTG 118 G + T D+A+S NGFF + +G+ + +R G F + N LVN G L G Sbjct: 67 AVTHQGDLSYTNSPTDLAVSGNGFFMVQSPSGTPYLTRAGSF-ISTNGELVNAAGFTLLG 125 Query: 119 YPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Y G+ I A + N + A +T+ + Q+NL S + T P + + Sbjct: 126 YDLLNGGSSSVINSAAGLVPVGTANLGLKATPSTSGNFQVNLPSDAAVSTSLPSANAAGA 185 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTL 236 + K S+ +D+ G+ + +Y KTG N W+V D N+ A + A L Sbjct: 186 DFAGKTSIITYDNLGHKVTLDIYSAKTGPNQWEVSVYD----NAGASAGGGFPYAAGSQL 241 Query: 237 VDGAMANNIATGAINGAEPATFSLSFLNS---------MQQNTGANNIVATTQNGYKPGD 287 A+ + TG + PAT S++ N Q GA V + NG P Sbjct: 242 TTQALTFSGTTGKLTSPSPATLSVNVPNGATLNFNMGNTTQLAGAYIPVDASANGNGPSA 301 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 + +I+ G V Y++ +I LAN A+ + L + NV++ + SG LGTA Sbjct: 302 VDRLEISAQGIVTAVYADGSRVDAFKIPLANVASPDNLTAISGNVFATNKESGDLQLGTA 361 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G+ G + +GALE S+VDL+ EL M+ AQR+Y +N++ +T ++L+ LVNL Sbjct: 362 NSGSLGKIVSGALEKSSVDLASELTTMVEAQRSYTANSKVFQTGTELLDVLVNL 415 >UniRef50_Q2RZC6 Flagellar biosynthesis cell-distal portion of basal-body rod n=2 Tax=Rhodothermaceae RepID=Q2RZC6_SALRD Length = 432 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 130/441 (29%), Positives = 199/441 (45%), Gaps = 54/441 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + S VSGL + T LD + NNIANS+T FK A+F++ Sbjct: 5 SLSIGVSGLRSHQTRLDTVSNNIANSSTTAFKRQRAAFSEELGQAILGVGRTAGGSNINP 64 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----SVFYSRNGQFK 101 SKVG GV VA I ++F+ G+ +TG D+A++ +GFF +G +R G F Sbjct: 65 SKVGRGVSVASIDRNFSQGSLNDTGIKTDLALNGDGFFVASPKSGAASDQRRLTRAGNFT 124 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 ++N LV GL + G+ G T G PN AAK TT A + NL++ Sbjct: 125 FNQNGELVTANGLNVQGWEV-GEDGTANTGELKNVQFDPNAQSAAKATTEAQVGGNLSAD 183 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD------S 215 + S V+D QG AH++ + F T ++ W +D Sbjct: 184 AEAGD------------TSEISSVVYDEQGKAHNVVINFENTSEDTWTFSVEDPDGVLQD 231 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS---------- 265 ++ T+ F +G+ VD A SL + N Sbjct: 232 ANGGGPGDANGTITFKDDGS-VDSISGMTNAYDPDGNGTNDGVSLDWTNDAVQGGKSLGI 290 Query: 266 ----MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 + Q +G+ QNG G+L Q +G + NY+N + Q+ + + N Sbjct: 291 SLRDITQFSGSTTSKFQGQNGNSSGELSGVQFTPEGKLQLNYTNGVQEEEYQLAIGDVNN 350 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL +G+N ++ T +SG LG AG ++ +GALE+SNVDL+KE ++I AQR+Y Sbjct: 351 PNGLEQQGENFFTTTGASGDLQLGRAGRDLQTSVVSGALESSNVDLAKEFSDLIKAQRSY 410 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 Q+++Q I T D++LN V L+ Sbjct: 411 QASSQIITTADEVLNQTVQLK 431 >UniRef50_A0LDL2 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL2_MAGSM Length = 496 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 131/492 (26%), Positives = 201/492 (40%), Gaps = 93/492 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------AGSKVGLG 51 A S L + VIGNN++N+ T FK +F D+ A +++G G Sbjct: 6 AMYAGSSALTNYGNAMTVIGNNLSNTNTTAFKGSRTTFEDVLIQTVGISGTRASTQIGTG 65 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------------SVFYS 95 V V+ I Q G T D+AI GFF++ D+N FY+ Sbjct: 66 VGVSAIDQLMQQGGFAGTSTVTDLAIDGQGFFKVRDANPGSAQLGGGGGNATSSMDTFYT 125 Query: 96 RNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASM 154 R G FK + + +V GL L GY + + + T+I++ K TT S+ Sbjct: 126 RAGDFKQNLDGYMVTNAGLILQGYAVD--QTSGETSGSMTDINLATYQSAEPKATTAISV 183 Query: 155 QINLNSSDPL---PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY 211 + L S + + + ++ SYN + V+DS G H++ ++F KT DN W Y Sbjct: 184 GMMLQSDAAIITDANHSTYDPNDPASYNYATPIRVYDSLGQGHNVELHFKKTTDNTWNWY 243 Query: 212 TQDSSD-------------------------PNSIAKTATTLEFNANGTLVDGAMANNI- 245 S+ P TA L F+ G L Sbjct: 244 VAVPSEDLSAAQAGTGDLTNMMAVTGAMESAPTGAGYTAGVLTFDTYGRLDTEGSTPITF 303 Query: 246 -ATGAINGAEPATFSLSFLNSMQ----------------------------------QNT 270 TG + AE F +++ Q Sbjct: 304 QFTGNSSTAETQQILFDFGDAITADATNDFSIADGAVLYGSGTNTAEVANTGLLGSVQRA 363 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + ++ +QNG+ G L S + DGT+ G Y+N +T+ L QI L +F N + L G Sbjct: 364 SSFTTMSASQNGFSAGFLESLSVGLDGTINGTYTNGETKALYQIGLVDFDNEQALDQVGA 423 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 N+++ T SGV G +G GT+ + LE SNVD+S E+VNMI QR +Q+N++ I Sbjct: 424 NLFAETHLSGVPREGEPNSGALGTIRSYTLENSNVDMSNEMVNMITTQRAFQANSRLITV 483 Query: 391 QDQILNTLVNLR 402 D +L L+ L+ Sbjct: 484 TDGMLEELIALK 495 >UniRef50_Q0EZL8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZL8_9PROT Length = 467 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 143/465 (30%), Positives = 218/465 (46%), Gaps = 68/465 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLGV 52 A SGL + + V+G+NIAN + GFKS + SF D+ + + +VG GV Sbjct: 6 ALFSGASGLTSFGEAVRVVGDNIANVNSIGFKSQSVSFTDVLSQTIGVSSTGSQQVGNGV 65 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNM 111 K+ I+++ G+ NT D+AI+ NG F L D YSR G F+LD+N NL++ Sbjct: 66 KIGTISRNQMQGSIQNTSSATDMAINGNGLFALRDPATNQTSYSRAGSFQLDKNFNLIDG 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL-PTVTPF 170 G + GY P + + + T++S N AK+T + + L+S+ P+ PT T F Sbjct: 126 GGNIVQGYAID--PLSGKAIGSATDLSFGNLAAQAKSTANVTSSLTLDSTAPVLPTGTVF 183 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSS--------- 216 + ++ +++ K VTVFD+ G H +S F + G +N W +T Sbjct: 184 NPADPATFHFKSDVTVFDALGATHVVSQQFTRMGQDAAGNNVWDYHTSVDGKEIVGGTAG 243 Query: 217 ---------------DPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS 261 A TL F G LV AT +G+ +T +L+ Sbjct: 244 TPTEVGAPTASTVSAGGTVTAIGTQTLVFGPAGELVQENAPP--ATFNWSGSAASTITLN 301 Query: 262 F------------------------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 F L++ Q GA +++GY G L + + G Sbjct: 302 FGNAAGQGTLYPVATADSQGITGTGLDATVQMAGAFATRQVSKDGYAAGFLDTLTTDSSG 361 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 TV G ++N Q + L Q+ LA F N+ L G N+ T SG +L G G GT+T Sbjct: 362 TVSGTFTNGQRRALFQVALAKFPNDAVLNHVGGNLMQETIQSGSPVLEKPGNGGMGTITP 421 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDL+ E V +IV QR Y++N++TI T DQ+L++L+ L+ Sbjct: 422 YGLEQSNVDLAAEFVKLIVVQRGYEANSKTILTTDQMLSSLMQLK 466 >UniRef50_UPI00016C0DB8 hypothetical protein Epulo_06138 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0DB8 Length = 473 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 125/480 (26%), Positives = 197/480 (41%), Gaps = 90/480 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL + +DVIGNNIAN T GFKS +FAD++ + Sbjct: 4 SLFSGVSGLQSHQLKMDVIGNNIANVNTIGFKSQRVTFADVYYQTTQSATTANEMTGLGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 ++GLG V+ I T G+ T D+ I + F + D+ G +Y+R+G F++ Sbjct: 64 MNAMQIGLGTSVSSIDMLMTPGSAQRTDNPFDLMIEDDAMFIVSDATG-TYYTRSGAFRV 122 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGA-NPTNISIP-NTLMAAKTTTTASMQINLNS 160 DE LV G+++ G+PA I +G ++ P N +TTT ++ NLN Sbjct: 123 DERGTLVIPNGMRVQGWPANEIGTEIMRGTVGDLKLNTPENNSADPQTTTDVNITGNLNV 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV------------------- 201 D + +A + ++ +D+ G + M + F Sbjct: 183 DDSI------NADGTTASPIYSAIKFYDTLGTQYSMPITFTATTLDAAQGQTVWTIGIPA 236 Query: 202 ---KTGDNNWQVYTQDSSD-----PNSIAKTATTLEFNANGTLV---------------- 237 T N + T + P ++F+ +G +V Sbjct: 237 DTLTTPPNPFTTITDTDGNQYLITPPVPTPNPAVIKFDVDGEIVLDGTEEMQFTAINLRN 296 Query: 238 ----------DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGAN-----NIVATTQNG 282 +A IA G T ++ Q ++ N + G Sbjct: 297 AYVRDPDDPSIATLAPIIADVGTQGTGGGTIEVNLSLLTQYDSITNLDPNMGTLDFNGAG 356 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G++ + + DG + YSN +LLGQ+ + F N GL DNV+ +T +SG Sbjct: 357 KAAGEMQGFDVGTDGKITAYYSNGDIKLLGQVAVTYFDNLAGLEKVADNVFKSTANSGDF 416 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G G+ G LE SNVDLSKE MI QR YQ++++TI T D++L L+NL+ Sbjct: 417 ----DGVGAAGSFATGTLEMSNVDLSKEFTEMITTQRGYQASSKTITTSDEMLQELINLK 472 >UniRef50_D1U366 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U366_9DELT Length = 515 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 130/513 (25%), Positives = 225/513 (43%), Gaps = 116/513 (22%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL A + V+ NN+ANS T +KS + +F D+F + +VG GV Sbjct: 6 SMYTGISGLKAQSQATSVVSNNLANSTTTAYKSSSITFEDVFYSTVYAGGSVGQVGNGVT 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 VA + D++ G+ +T DVAI+ NGF+ ++D + G+ +Y+R G F + L + Sbjct: 66 VASVNTDYSQGSYESTNSATDVAINGNGFYVVIDPDTGNTYYTRAGNFTFNTEGYLEDAH 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G ++ G+ T+I I + T+ +NL+S++ T + + Sbjct: 126 GNKVQGWAMNDGSIE----GTLTDIVIDQSQSPPNATSEVGFSLNLDSTETDHTTSATNP 181 Query: 173 SNA---------------DSYNKKGSVTVFDSQGNAHDMSVY--------------FVKT 203 A +Y +++VFD G+AHD++VY +V T Sbjct: 182 YAALFEAYDGTADPALGDSAYAYSTTISVFDENGSAHDVTVYFDPVETDDGTIVWEYVVT 241 Query: 204 GDNNWQVYTQDSSDPNSIAKTA----TTLEFNANGTLV---------------------- 237 + + + ++ N+ + T+ F+++G +V Sbjct: 242 CNGSEDNRDFNGTEMNATSGAGMLMTGTVTFSSSGDIVSMTAFTLSDTPTNLTDPLAAEN 301 Query: 238 --------DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN--------------- 274 DG + + +P +L N+ TG + Sbjct: 302 WVLADFDADGFPVFSANFTGADEDQPIALNLGMANTNTTGTGWDTSGGISSLADFTPTTA 361 Query: 275 -------------------------IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 + +Q+GY PG L++ I+++G + G Y+N QTQ Sbjct: 362 VGDLPAFNNGVVQTTTTTSTSLSSATYSLSQDGYAPGVLINVAIDENGVLSGEYTNGQTQ 421 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 L I LANF N +GL+S+G N++SAT SG A +GT G+ FGT+ + +LE SNVD + Sbjct: 422 ELYTIALANFTNTQGLSSQGSNLYSATTESGQAFIGTPGSAGFGTIASNSLEQSNVDTAT 481 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 EL +I+ Q YQ+NA+ I T D +L+ ++++ Sbjct: 482 ELTKLIILQAAYQANAKVITTADTLLSAAISMK 514 >UniRef50_Q1MRH2 Flagellar hook protein FlgE n=6 Tax=Desulfovibrionaceae RepID=Q1MRH2_LAWIP Length = 502 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 130/499 (26%), Positives = 210/499 (42%), Gaps = 99/499 (19%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG------------SKVG 49 + +G+ +T L + NNIAN+ T G+K F D+F+ ++ G Sbjct: 4 SLFIGATGMKTHSTGLGTVSNNIANANTIGYKQQQVVFQDLFSQDLAIGSTGSQGPNQAG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 +G +V + FT G D+AI GFF++ + V Y+R G F+ ++ L Sbjct: 64 MGAQVGSVRTIFTQGAFEPGNSVTDLAIGGKGFFQVTLED-KVHYTRAGNFRFTQDGFLN 122 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL---MAAKTTTTASMQINL-NSSDPLP 165 + G L G + P ++ P + + AKT+T + +NL +S+D Sbjct: 123 DPSGFTLMGSRISNNPNIKKETLEPIQLDFNDPTVAKSPAKTSTALNAVVNLGDSTDKTQ 182 Query: 166 TVTPF-------------SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN----- 207 + + +Y+ + V+D QGN+HD++VYF + Sbjct: 183 SEANPYFALLESWKGNGTPPISTSNYSYAQPMRVYDQQGNSHDITVYFDGAPSSTGSKTF 242 Query: 208 -WQVYTQDSSDPNSIAKT-------ATTLEFNANGTLVDGA--MANNIATGAINGAEPA- 256 + V S D ++ + T + T+ F++NG L + AT +N +PA Sbjct: 243 EYLVAMNPSEDGSAASGTDSAGLLMSGTMTFSSNGELKNMTAFTPTGSATKDLNAWQPAP 302 Query: 257 ------------------TFSLSFLNSMQQN----------------------------- 269 +L F QQN Sbjct: 303 LVNGLPQFSANFVGAGIQPLTLDFGIKSQQNMWAGAPASAAAIGTDIGKLPSMMPIQTSS 362 Query: 270 ------TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 G+++ +Q+GY GDLV I +G + G YSN Q I LA F + + Sbjct: 363 GNSTARNGSSSTRRYSQDGYPQGDLVDVTITSEGKLQGKYSNSQVVDFYNIPLARFTSED 422 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL EG+N +SAT SG G GT N+G L+ LE SNVD+S+E+VNMI+ QR +Q Sbjct: 423 GLRREGNNHYSATLDSGGPEFGLPGTSNYGKLSVNQLETSNVDMSREMVNMIIIQRGFQM 482 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++++ T D +L + L+ Sbjct: 483 NSKSVTTADTMLQKALELK 501 >UniRef50_C9LSP4 Flagellar hook protein FlgE n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSP4_9FIRM Length = 496 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 142/496 (28%), Positives = 215/496 (43%), Gaps = 99/496 (19%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + VSGL + T +DVIGNNIAN T GFKS +FAD ++ Sbjct: 4 SLFSGVSGLKSHQTRMDVIGNNIANVNTIGFKSSRVTFADTLYQTQSGAAAPTGTVGGTN 63 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKL 102 +GLGV VA + Q F D + TG+ D+A+S NG F + G +Y+R G F Sbjct: 64 PKQIGLGVGVASVDQLFGDASPQATGKNTDLALSGNGLFVVSRDAGGKDKYYTRAGNFSF 123 Query: 103 DEN-RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL--MAAKTTTTASMQINLN 159 D N +V G + G+ A +I PT I I + + M AK TTT S + N+N Sbjct: 124 DANYNYVVPGSGYHVVGWNADENG-SIDTKGTPTGIQIKDAMRSMGAKATTTISYKGNMN 182 Query: 160 SSDPL--------------------------------PTVTPFSASNADSYNKKGSV--- 184 SS P T +A + Y K S+ Sbjct: 183 SSVPTITSIRNQTGAVVASPAKVDGVTNTSLTLTLSDGTTQTVTAKSNYEYRTKCSMPIT 242 Query: 185 ---TVFDSQGNAHDMSVYFVKTGD--------NNWQVYT-------------------QD 214 V+DS GN H + F K + W+V +D Sbjct: 243 TIANVYDSLGNLHKVPFLFTKVPGSGTPPLMYDEWEVSLSPATTSGGTLDPVNQCSIKED 302 Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIA--------TGAINGAEPATFSLSFLNSM 266 ++ TL+F+ NG V GA + +G+ + T ++ L S+ Sbjct: 303 DGSWTTVKMNKKTLKFDQNGKYVSGAGDPELTLQNGAGSISGSGTPSATMTATVD-LKSL 361 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q +G++ I A +G+ G L + G + G Y+N + + L Q+ +A F N GL Sbjct: 362 TQYSGSDTIKA-DYDGHSAGTLKEINTDQSGILTGTYTNGEKRALAQVAVAQFDNAPGLT 420 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 G N+++ + +SG A + T TLT ALE SNVD++ E +M+V QR +QSN++ Sbjct: 421 KAGANLYTESNNSGTANIKTVSALGL-TLTPSALEMSNVDVANEFADMVVTQRGFQSNSK 479 Query: 387 TIKTQDQILNTLVNLR 402 I D++L T++N++ Sbjct: 480 VITVGDEMLETVINMK 495 >UniRef50_C6HWM7 Probable flagellar hook protein FlgE n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM7_9BACT Length = 458 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 127/460 (27%), Positives = 204/460 (44%), Gaps = 73/460 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------SKVGL 50 + A SGL+A T++ VIGNNI+N T GFK+G A FA+++ S+ G Sbjct: 6 SMYVANSGLSAMGTDMSVIGNNISNMNTNGFKAGRAVFANIYGQTLAGKSNAVGPSQPGS 65 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V I FT G+ T LD+AI NGFF + G++ Y RNG LD N +V+ Sbjct: 66 GVYVESIEPLFTQGSVQTTSNALDLAIQGNGFFSFRNRQGAILYGRNGALSLDRNGRIVD 125 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L GY A + + ++S+P + + K + +INL+++ Sbjct: 126 QGGHILQGYMADARGKILPK---VRDLSVPQSTIPPKASQNVYSRINLDANMTEKLK--- 179 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------------------GDNNWQVY 211 S +FDS G H ++ F T G + Sbjct: 180 -----TGKTFSKSSNIFDSLGIEHLLTYKFHPTNQVGVWAVEATLDGATLTKGGGSISYT 234 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN------- 264 P +I ++ F+ NG + + + + +G + ++++ + Sbjct: 235 PASGGKPMTIKGMVASVAFDGNGNVETVNYGGSPVSQSSDGVQNVVYTMALADKAKTPVN 294 Query: 265 -------------------------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + Q + + TQ+GYK GDL + I+ G + Sbjct: 295 LSLFIPKAGQKVADNSKDGTTQQVLDLTQYAEPSTTIEETQDGYKAGDLSNIAIDRAGRI 354 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 VG++SN LG I ++ F N GL S G N++ + SG+A +G AG G G + + Sbjct: 355 VGSFSNGTEHNLGAIAVSTFNNPNGLVSVGANLYKESIGSGIANIGRAGQGGRGQVLANS 414 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 LE SNVDL +++++MI A+R YQ+NA I +Q++NTL+ Sbjct: 415 LEQSNVDLGRQMIDMISAERGYQANASVISADNQLMNTLL 454 >UniRef50_Q6AGA2 Flagellar hook protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AGA2_LEIXX Length = 390 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 130/419 (31%), Positives = 194/419 (46%), Gaps = 52/419 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + V GL A T LDV NNIAN T GFK+ + F D + Sbjct: 4 SLDSGVFGLQAQQTMLDVTANNIANVNTAGFKASSVQFEDALSQVTRTASAPTDVIGGTT 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 + VGLGV+ AGI D+T G T TG+ ++ ++ +GFF ++ S G Y+R G F D+ Sbjct: 64 PAAVGLGVRAAGIDTDWTQGATQTTGKATNLTLNGDGFF-VIRSAGQTQYTRAGNFTTDD 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + LV G ++ G+ A G + G P+ I+IP N A TT+A+ NL S Sbjct: 123 SGTLVTPDGARVQGWGAAG--GVVNSGVAPSTITIPLNVQSPAVATTSATATGNLPSDAA 180 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 V SV V D+ G +++ F +G +W V D++ + Sbjct: 181 AGAVV------------SSSVRVHDAAGGERTLTLTFTSSGGGSWSVNAADANGATASGP 228 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 A T + G + S+ M GA + T QNG Sbjct: 229 LAFTAGARSTGGTL----------------AVGGISVDM-TQMTVYAGATSAGITKQNGS 271 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L S+ + DGT+ G++SN +G++ +A F+N G G + ++AT SG+ Sbjct: 272 AAGALQSFTFDQDGTIEGSFSNGARLAIGRVAVATFSNPSGFQKAGSSAFTATADSGIPQ 331 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + A GT+T GA E SNVDL +E N+IV+QR +Q++A+ I T D+IL L L+ Sbjct: 332 V--AADSGTGTITVGAYEGSNVDLGREFTNLIVSQRAFQASARVITTSDEILQELTQLK 388 >UniRef50_UPI00016C5508 hypothetical protein GobsU_27906 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5508 Length = 430 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 138/437 (31%), Positives = 197/437 (45%), Gaps = 50/437 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A SGL ++ LDVIGNN+AN T G+K F D+ + Sbjct: 5 ALFVGSSGLTTNSSALDVIGNNLANINTTGYKDQRMVFRDVVYQTLSSGTSADAGTGGVN 64 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VG GV V I FT G TGR LDV + GFF + + V Y+R G F +D Sbjct: 65 PTQVGFGVGVGSIGTQFTQGNLNPTGRSLDVGLQGRGFFVMRNVE-DVAYTRAGAFGVDS 123 Query: 105 NRNLVNM-QGLQLTGYPATGTPPTIQQGANP------TNISIP-NTLMAAKTTTTASMQI 156 LV+ G ++ + G G +I IP T A TT Q Sbjct: 124 AGYLVDPGTGFRVQRFGPVGEGGASNAGDPQFQIPGNLDIQIPFGTGAAGIATTNIDYQG 183 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT-QDS 215 NL+S+ + V ++ V+D+Q A ++V F KT N + Sbjct: 184 NLSSAMQVGEV------------ATTAIQVYDAQSTARAVTVTFTKTAANTYTPSVLVSG 231 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIAT--------GAINGAEPATFSLS---FLN 264 +D + T + FN+ G +V A T IN A+ T +L N Sbjct: 232 ADAAQVTLTGGPISFNSTGQIVGTANTPVTLTLTLGANALPGINTAQTITLNLGTAGLTN 291 Query: 265 SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 + Q GA A Q+G G L I+ DG V G ++N +T L Q+ +A F N +G Sbjct: 292 GLTQFGGATTASAIGQDGSGFGTLTDVSIDADGIVQGKFTNGRTINLAQLAVAGFNNEDG 351 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L G+N + ++ +SG AL+G AG G G+L GALE+SNVD++ E +IVAQR +Q N Sbjct: 352 LLRSGNNYFRSSVASGEALIGLAGQGGRGSLMGGALESSNVDIAIEFSRLIVAQRGFQVN 411 Query: 385 AQTIKTQDQILNTLVNL 401 A+TI + + L L N+ Sbjct: 412 ARTISSTNDTLQELANI 428 >UniRef50_C5SQ30 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ30_9CAUL Length = 459 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 121/453 (26%), Positives = 191/453 (42%), Gaps = 52/453 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVK----VAGI 57 A VS L+A +T L I NNIAN T +KS + SFA + S + Sbjct: 6 AMLSGVSALSANSTALAAISNNIANVNTTAYKSVSTSFAANVSSSGSSTYSSGGVSASTA 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLV---DSNGSVFYSRNGQFKLDENRNLVNMQGL 114 G T LD+AI +GFF + D +G +Y+R+G F +++ LVN G Sbjct: 66 LSITEAGALQTTTSSLDLAIDGSGFFVVSEGADGSGGSYYTRDGSFSVNDEGYLVNSSGY 125 Query: 115 QLTGYPAT--GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 L G+ A G ++ + I IP + TT+ S+ NLNS+ + Sbjct: 126 YLQGWQADSSGNVTAASSVSDLSAIKIPTSSDTPTATTSISLAANLNSATEAYAGEYDIS 185 Query: 173 SNADSYNKKGS------------VTVFDSQGNAHDMSVYFVKT-GDNNWQVYTQDSSDPN 219 + N ++V DS G H +++ +K+ N W Sbjct: 186 TGLSMANYDEDEETGVEPDFEIGISVSDSLGKEHTLTLSVLKSETTNEWTAELWSDDVTG 245 Query: 220 SIAKTA-----TTLEFNANGTLVDGAMANNIA----------------------TGAING 252 T+ FN +GTL + ++A + G Sbjct: 246 GYGSEGNIIKSGTITFNEDGTLNEDSLAAFFGAEDLSQIKIDIAASSDETGALRWTSETG 305 Query: 253 AEPATFSLSFLN---SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 A + SLSF + + Q + + + +G DL I DDGTV Y + ++ Sbjct: 306 AAAQSLSLSFDDTQGGLTQYATTSEVKSIKADGTVFSDLSDVTIADDGTVNAIYEDGTSR 365 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 +L QI +A F N GL ++ NV++ + SG L T G+G G L + +LEAS VDLS Sbjct: 366 VLAQIPVATFVNANGLTAKSGNVYALSSESGSYTLRTPGSGGAGLLASSSLEASTVDLSS 425 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E ++I QR Y + ++ I T D+++ T++ + Sbjct: 426 EFTSLITIQRAYSAASKIITTSDEMMQTVIESK 458 >UniRef50_B9JZL6 Flagellar hook protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JZL6_AGRVS Length = 411 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 124/414 (29%), Positives = 196/414 (47%), Gaps = 24/414 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + +VSGL A + L IG+NI+N++T G+K +F+ + G G Sbjct: 6 AMNSSVSGLTAQSNKLTSIGDNISNTSTTGYKGTETAFSSLVNG-----GTTSTTTQTVS 60 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPA 121 G +T D+AI +G+F + D G VF +R G F++DE+ LVN G L GY Sbjct: 61 QSGDLESTSSETDLAIDGDGYFVVQDDEGDVFLTRQGDFEIDEDGYLVNSSGYTLLGYSY 120 Query: 122 TG--TPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD-SY 178 I + I + + A TTT + NL S + + + S+++AD ++ Sbjct: 121 DNGEPASVINGFDGLEPVKIDTSEVTASATTTGEVSGNLESDEEVVSGDTPSSNSADATF 180 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA-----------TT 227 K S+ +D QG + +YF KT D+ W+V + + N TT Sbjct: 181 TAKSSIVTYDEQGASTQYDIYFTKTDDDEWEVSIYRNDEANDDDDGTSFPYDNGELGSTT 240 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 L F++ G L DG+ + T + T L F + Q T + + + NG Sbjct: 241 LTFDSAGELEDGSTSTLSFTDSET---GLTIDLDFSDITQ--TATSTSIEGSANGSAASS 295 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Y I DG + S+ T +I LA A+ + L G + SG ++G A Sbjct: 296 SSDYTIGSDGVISTVSSDGTTTDTYKIALATVASPDNLEEVGGTAYKVDADSGTVVVGFA 355 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 GTG+FGT+ + LE+SNVDL+ EL +MI AQR Y +N++ +T +L+T++N+ Sbjct: 356 GTGSFGTIESSTLESSNVDLASELSDMIAAQRAYSANSKVFQTAADMLDTVINM 409 >UniRef50_C4Z5G6 Flagellar hook protein FlgE n=2 Tax=Clostridiales RepID=C4Z5G6_EUBE2 Length = 464 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 128/452 (28%), Positives = 202/452 (44%), Gaps = 66/452 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVSGL A T +DVIGNNIAN T FKS + +F+++F + Sbjct: 27 SMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNAESGKGG 86 Query: 47 ----KVGLGVKVAGITQDF-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFK 101 ++GLG V I+ T+G + T D+ I + FF + +S G+ F++R G FK Sbjct: 87 TNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIV-NSAGNTFFTRAGNFK 145 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNS 160 +DE+ LV G + G+ T ++ + ++ P + T+ + N+N+ Sbjct: 146 VDESGALVTSAGANVMGWQVDETGKAVKDVVSKLYVNSPEFAYTSPQRTSAVNFTGNINA 205 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV---YFVKTGDNNWQVYTQ---- 213 S ++ +DS GN+ +V Y GDN T Sbjct: 206 S--------------SKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDNTQYTMTCVGVS 251 Query: 214 -DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPAT--------------- 257 + + + + L FN L D + AN T + + T Sbjct: 252 KNGNPTDLTFTASGPLSFNTLTGLADQSNANIQLTFSNDATLAQTNENIDIRTIGESETS 311 Query: 258 --FSLSFLNSMQQNTGANNIVATTQN----GYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 +LS + + G G + S I++ G +V +YSN T+ + Sbjct: 312 PVLTLSGSGLTMYADKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIVASYSNGDTKNI 371 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVAL-LGTAGTGNFGTLTNGALEASNVDLSKE 370 GQI +A F+N EGL EG+N++SAT +SG +G T + G++++G LE SNVDLS E Sbjct: 372 GQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGVLEMSNVDLSSE 431 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NMI QR YQ+N++ I D +L L+NL+ Sbjct: 432 FTNMITTQRGYQANSRIITVSDTLLEELINLK 463 >UniRef50_B8FTP1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FTP1_DESHD Length = 426 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 103/424 (24%), Positives = 181/424 (42%), Gaps = 26/424 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL +DV+GNNIAN T GFK +F+ M + + Sbjct: 4 SLYSAISGLKNHQIKMDVVGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG V+ I Q T G++ NTG+ D I+ GFF ++ G + Y R G F D+ Sbjct: 64 PAQVGLGSMVSSIDQIMTTGSSQNTGKSTDAMINGRGFFVFRNA-GQIVYGRAGAFSQDQ 122 Query: 105 NRNLVNM-QGLQLTG--YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 N L + G + G + A A T + + + Sbjct: 123 NGYLTDPGTGAFVLGQMWGANDREILEWGSAPLTPLRFNIGSYPPEPEGGIIKINLGDFV 182 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 + + + DS ++ + + + +D + Sbjct: 183 QNGSNYEYVNPALIGASATVPDGGTLDSTTGK--ITFTKDPADEASGDPPAIEITDIDYD 240 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 T +F G++ + + + + + + ++ + + + Sbjct: 241 KLTIPAGDFVQKGSVYVYENPDLVGADLEDITDGSFDPKTGTITLNAAPPSAGVEIEGVD 300 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQ---TQLLGQIVLANFANNEGLASEGDNVWSATQS 338 G L I+ +G + G YSN + ++ +GQ+ +ANFAN+ GL + G+N ++AT + Sbjct: 301 GRLRAKLDEVTIDGNGIISGIYSNGKGSASRRIGQLAIANFANDAGLQNVGNNFYAATNN 360 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG+A +G AGT G + ++E SNVDLS+E +MIV QR +Q+N++ I D +L L Sbjct: 361 SGIADIGAAGTAGRGNIIPNSVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQEL 420 Query: 399 VNLR 402 ++L+ Sbjct: 421 IDLK 424 >UniRef50_C5CYE8 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYE8_VARPS Length = 395 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 115/415 (27%), Positives = 179/415 (43%), Gaps = 39/415 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------KV 48 + ++GL + L VI NN AN T GFKS + FADMF +V Sbjct: 4 SIYVGMTGLLGYSRGLRVIANNTANINTPGFKSSSLQFADMFYSGGNLGGGSTSQNRDQV 63 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 G G+ AG + F G TG LD+A+ G F L D+NG Y+R GQFK D + L Sbjct: 64 GFGLSTAGTSLSFKQGELRQTGNDLDMAVDGQGLFALQDANGKTTYTRAGQFKFDADGTL 123 Query: 109 VN-MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 V+ + G ++ G G I ++ + T+ NL Sbjct: 124 VSRVNGEKVMGLDDRGGLVAITLAGQMMSL--------GRPTSRVEFSGNL--------- 166 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 SN + G + V D+ G +H +++ F + + + Sbjct: 167 -----SNTVTEQTIGGIAVVDASGASHTLTMKFSVVSAAQSGTTMKVELMEGTTVVSTGQ 221 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 + F G A A A G P +L F + + G ++ +Q+G PG Sbjct: 222 MVFV--GGKPTPETAKLQAAYAPAGQPPMALTLDFSSDVVLFAGQTSLKVDSQDGIGPGA 279 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 L + DG + NYSN T ++ LA F + + + S GDN + + LG A Sbjct: 280 LSGTTFDADGNLTLNYSNGSTVKGARLALARFDSPDAVGSLGDNQFEQLDENAWH-LGVA 338 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G FG ++ G +E SNVDLS+E ++++ QR YQ+++Q I T + +L L +++ Sbjct: 339 GEGAFGKVSAGRVEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQELFSMK 393 >UniRef50_A0Q031 Flagellar basal-body rod protein FlgG n=1 Tax=Clostridium novyi NT RepID=A0Q031_CLONN Length = 485 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 132/485 (27%), Positives = 200/485 (41%), Gaps = 88/485 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----------------- 44 + +SG+ T LDV GNNIAN +T GFKS F DM + Sbjct: 4 SMYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQGGVN 63 Query: 45 GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRL-------VDSNG------- 90 G +VGLGV+VAGI + G T R LDVA+ G+F + ++ G Sbjct: 64 GKQVGLGVQVAGIDTVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVSESE 123 Query: 91 --------SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNT 142 V Y+R+G F LD NL+ G ++ GY T ++SI Sbjct: 124 HTMSGGAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINEKDSTGNATG---DVSIDYN 180 Query: 143 LMAAKTTTTASMQINLNSSDP-----LPTVTPFSASNADSYNKKGS---VTVFDSQGNAH 194 A A + L +S+ +P A+ D N + +FD+ G+A Sbjct: 181 ANGAVNFVNADGEFGLKASNTLVPLRIPDSVHMKATTKDKQNMIITNGDKILFDNDGDAT 240 Query: 195 D-------MSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIAT 247 + +S+ G N +V + + + + N T ++ A A+ I Sbjct: 241 NGIQGFPEISLDDTFKGKENVKVEIKYDTKDKAGKDKGWIIFLNGKKTFLE-ANASEIDD 299 Query: 248 GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG--------------------- 286 AI+G + A S S +++ + I T + Sbjct: 300 AAIDGVDAALLSASEKKDIKELLNGSKITITDPDPNTTNIDTDDKKAKYKWSFTLQPECD 359 Query: 287 -DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL- 344 L S+ I DG V G + LGQI A+F N EGL EG N++S T +SGV + Sbjct: 360 KKLRSFAIEKDGLVKGVLDDGTVTALGQIATASFKNQEGLKKEGKNLYSNTANSGVPTVR 419 Query: 345 ---GTA----GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 GT +G + G LE SNVDL+++ +MIV R +Q++ + I T D+IL Sbjct: 420 SGLGTPKNLDNGDGYGEMLQGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQD 479 Query: 398 LVNLR 402 ++NL+ Sbjct: 480 IINLK 484 >UniRef50_Q01PQ4 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PQ4_SOLUE Length = 421 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 121/427 (28%), Positives = 200/427 (46%), Gaps = 36/427 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 +FS A+S L+A AT +DV+GNN+AN T GFK+ F D+ S +VG G Sbjct: 4 SFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFRDLVTQSLGAGLGETQVGFGTG 63 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + FT G ++ LD A+ +GFF ++ G+ Y+R G F++D+ NL G Sbjct: 64 RPLTIRQFTQGAIQSSTGLLDAAVQGDGFFVAKNAQGNTVYTRAGNFQVDDAGNLKTNTG 123 Query: 114 LQLTGYPA-TGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 + G+ + T + +I +P +T ++ +NLNSS Sbjct: 124 ESVQGWTSLDSTTGVLDTNGAIGDIVVPVGAAKQPIASTGFTLDLNLNSSAAAE------ 177 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT----- 226 D+ ++ V+DS G +H ++V+F KT + W + S T Sbjct: 178 ----DTSKFSDTIKVYDSLGESHILTVHFQKTDASQWSYSVSVPGEDLSGGTAGTPTDIG 233 Query: 227 ---TLEFNANGTLVDGAMANNIATGAINGAEPATF--------SLSFLNSMQQNTGANNI 275 +L F A+G L A + I A A + + + Q ++ Sbjct: 234 ASGSLTFGADGQLTSPAAGSVIGLDITGLASGAADMHLDWNPRTDNGGGRITQFGQPSSA 293 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 A++QNG L+ + D G ++ YS+ Q ++GQ+ +A+ N E L + G+N + A Sbjct: 294 SASSQNGSAAAQLIRVGLADGGKMLAQYSDGQQVVVGQVAMASVRNPESLIAVGNNNYQA 353 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 + + +G TG G + GA+EAS VD++KE N+IV QR YQ+N++ I T D++ Sbjct: 354 SARTATPAIGLPNTGGRGDIVGGAIEASTVDIAKEFTNLIVLQRGYQANSRVITTVDELS 413 Query: 396 NTLVNLR 402 +NL+ Sbjct: 414 QETINLK 420 >UniRef50_B6IQC5 Flagellar hook protein FlgE n=1 Tax=Rhodospirillum centenum SW RepID=B6IQC5_RHOCS Length = 434 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 111/435 (25%), Positives = 178/435 (40%), Gaps = 43/435 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 A VSGL A + I +NI+NS+T G+K F+ + GS GV+ Sbjct: 6 AMYSGVSGLAAQSAKFAAISDNISNSSTVGYKRSGVQFSTLVTSASSPGSYSAGGVQADL 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-------FYSRNGQFKLDENRNLV 109 T+ G T D+AIS GFF + + + +V +R+G F++DEN NL Sbjct: 66 HTEVSRGGIVQATNSATDMAISGRGFFVVSNRSAAVNGEAPSYMLTRSGAFRVDENGNLH 125 Query: 110 NMQGLQLTGYP------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 N G L G+ G P+ +++ + AK TT NL +S Sbjct: 126 NTAGYFLQGWKLGPDGKVVGGEPSRTSFTGLETVNLSSITGLAKATTQIDFAANLPASQ- 184 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPNSIA 222 + + SV + G +++ + + N W + D + A Sbjct: 185 -------TGKTPPAQPFSTSVDYYTPLGGTGRLTLEWAPQSAANEWNLTIYDGTTSLGTA 237 Query: 223 K---TATTLEFNANGTLVDGAMANNIATGAINGA----------EPATFSL---SFLNSM 266 T G+L + T ++ A +P +L + + Sbjct: 238 NIVFNGNTATSGPPGSLNTMSEVGASPTLDVDAATGSIKLDVNGQPIVVNLGRPNQTGGL 297 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q ++G L +I DDG + Y N Q + QI +A+ N +GL Sbjct: 298 TQWGDDYVPTKINKDGASYAPLERVEIGDDGVMTAIYKNGLRQAVYQIPVADVTNPDGLR 357 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 N + ++ SG L AG+G G + ALEASNVD+++EL ++I QR Y SNA+ Sbjct: 358 RMDGNAFQVSRESGDYYLWDAGSGKAGAVDGAALEASNVDIAEELTSIIETQRAYSSNAK 417 Query: 387 TIKTQDQILNTLVNL 401 I+T D++L+ + L Sbjct: 418 IIQTADEMLDEVSRL 432 >UniRef50_Q1YLP3 Putative flagellar hook protein FlgE n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLP3_MOBAS Length = 388 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 134/412 (32%), Positives = 191/412 (46%), Gaps = 43/412 (10%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG----LGVKVAGIT 58 F +VSG+NA A L + NIANS+T G+K + FA + G VK Sbjct: 7 FRTSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLAQGGGEYNPGSVKTQVRQ 66 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR-------NLVNM 111 G+ T G D+AI +GFF + D+ G FY+R G F LVN Sbjct: 67 SISQQGSIAATSSGSDLAIQGDGFFVVQDTAGREFYTRAGSFVQRTETIGGKETTFLVNT 126 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G +LTG P G I +P ++A K T + I S + Sbjct: 127 AGYRLTGSPVGG--------GAAAPIELPVGAIVAPKATDAGAFTIQFPESAAVGD---- 174 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 KK S+ V+DS G A ++ V KT N W V DS P + TT+ F Sbjct: 175 --------TKKSSMVVYDSIGKAIEVPVDMEKTAANTWTVSYTDSGGPQT-----TTIVF 221 Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 + N A AN T T + F + + T ++ + T NG PG Sbjct: 222 DPNTGRPTAAPANMTYTH----VNGDTVDIEFGSLTEYATDFSSKLVT--NGNPPGSFTG 275 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 + ++GT+ G + Q L ++ LA FA+ + L + NV+SAT SSGVA LG GT Sbjct: 276 FAFAENGTLSGVMNTGQLIPLYEMSLARFASPDQLQASAGNVYSATASSGVAALGGPGTN 335 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G+L + LE SNVDL+ EL +MI +QR+Y +N++ +T +IL+ LVNL+ Sbjct: 336 GYGSLVSSGLEQSNVDLASELTSMIESQRSYSANSKVFQTGAEILDVLVNLK 387 >UniRef50_A0AGF2 Complete genome n=21 Tax=Listeria RepID=A0AGF2_LISW6 Length = 411 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 111/420 (26%), Positives = 178/420 (42%), Gaps = 36/420 (8%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL------------ 50 A+SG+NA L V NNIAN+ T G+K + F D+ + +G Sbjct: 5 MYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAGTNPM 64 Query: 51 ----GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-SNGSVFYSRNGQFKLDEN 105 G K+ I D+T G+ T+TGR D A+ GFF D + G++ Y+R+G F + +N Sbjct: 65 SFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFAVSDN 124 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L QG + GY + P I + N+ + + T S+ N+ Sbjct: 125 NYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPL-NSAIPGEATKNGSLSGNIPLD---- 179 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF----VKTGDNNWQVYTQDSSDPNSI 221 + ++V+D+ G H + V N Y Sbjct: 180 --------WGEKDTISSELSVYDNAGGKHKLQVNMKAATPDASGNVSYEYEIQMDGKALT 231 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 TL +NA G L + NI + + L+ N G N + + T + Sbjct: 232 PPVTGTLNYNAQGELTNPDALKNIQINSTVNGKQVNMGLNLSGLT--NYGTNQVFSPTSD 289 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G + Y + D G + +YS+ + Q+ +A F+N +GL G+ + SSG Sbjct: 290 GKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGD 349 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A+ G AG G ++ +LE SNVDLS+E VN++ Q +Q N + I+ D ++ +VNL Sbjct: 350 AVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNL 409 >UniRef50_A9KNF2 Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNF2_CLOPH Length = 479 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 121/476 (25%), Positives = 193/476 (40%), Gaps = 76/476 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DVIGNNI+N T GFK+ +A+F+D+ + Sbjct: 4 SLYSGVSGLRVHQTKMDVIGNNISNVNTVGFKASSATFSDILYQTTKSASGPNPNTGTAG 63 Query: 47 ----KVGLGVKVAGITQDFT-DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFK 101 ++GLG +A IT T G + T D+ I +GFF + + G+ F+++ G F Sbjct: 64 TNAMQIGLGANLASITASITKTGGSQRTDNPFDLMIEGDGFFVVNNGVGN-FFTKAGSFN 122 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI---PNTLMAAKTTTTASMQINL 158 +D L G + G+ + P + + + I N A + TT + N+ Sbjct: 123 VDAAGTLCTPTGATVMGWQPSREDPRKTVPGSVSPLRIMSPENLYSAPEATTDIYLHGNI 182 Query: 159 NS-----SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNW----- 208 +S + + S + + V + S+ + D V D Sbjct: 183 DSMDTNLTSSTGRIVNMSFFDNLGNSYTAEVKIKQSEDSKSDYKVTIQNIYDKKGDSIFA 242 Query: 209 -QVYTQDSSDPNSIAKTATTLEFN---------------------------ANGTLVDGA 240 +V D+ D A T F ANG V Sbjct: 243 KKVVDPDTGDITYEASNITDFNFGNGTGSVTVNDDGTIEVDCDEIDLKFNGANGNFVSVG 302 Query: 241 MANNIATGAI-----NGAEPATFSLSFLNSMQQNTGANNIVATTQ--------NGYKPGD 287 + AT + ++ F + N V +T+ G G+ Sbjct: 303 DDADNATSIKFKVNADPDPFKDVNIDFSSITMYNNSGTTTVESTKGAKADGTGAGKAAGN 362 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL-LGT 346 + I+ G + G Y N +LLGQ+V+A F+N GL + G+N++SAT +SG +G Sbjct: 363 MSGISIDQQGMIFGTYDNGDRKLLGQVVVATFSNPAGLEAIGNNMFSATPNSGEFNGVGE 422 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T + G G LE SNVDLS++ MI QR +Q+N++ I T D +L L+NL+ Sbjct: 423 DITSSGGKFITGVLEMSNVDLSQQFTEMITTQRGFQANSRIITTSDTLLEELINLK 478 >UniRef50_B4RG77 Flagellar hook protein FlgE n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG77_PHEZH Length = 452 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 110/451 (24%), Positives = 197/451 (43%), Gaps = 51/451 (11%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAGI 57 VSGL A ++ L I +NIAN T +K +FA++ G GV+ Sbjct: 1 MLAGVSGLVANSSALAAISDNIANVNTVAYKRNQVNFANVVTAQAVKGKYSAGGVQSVTR 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN------GSVFYSRNGQFKLDENRNLVNM 111 G + D+AIS +GFF + + ++R+G F +D + +VN Sbjct: 61 QFVSQQGLIQASNSTTDLAISGDGFFVVANKGLGLTGADPRSFTRSGAFAVDSDGYMVND 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT---NISIPNTLMAAKTTTTASMQINLN-----SSDP 163 GL L G+P ++ + +I++ N A TT + N+N S+ Sbjct: 121 AGLYLQGWPVQADGTFNVNPSDLSLMQSINVKNLGSAVAPTTELGVTANVNKDGPVSASE 180 Query: 164 LPTVTPFSASNADSYNKKGS-----------VTVFDSQGNAHDMSVYFVKTG-DNNW--Q 209 +A++ Y + V DS G + +++ +K N W + Sbjct: 181 ATYDGSVAATSMAEYADSAGATGVKPDFVIEMNVVDSAGGSRKIALAMLKDDVANAWHAE 240 Query: 210 VYTQDSSDPNSIAKTA------TTLEFNANGTLVDGAMANNIATGAINGAEPAT------ 257 +Y +S + A T T+ FNA+GT+ G + + +++ + AT Sbjct: 241 IYAVPASSVDLAAGTPPGQLARGTINFNADGTINLGTTTAALQSLSLDASAGATPRWATG 300 Query: 258 -----FSLSF-LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 ++ L+ + Q + + + A NG G++++ ++ +G V Y N Q + + Sbjct: 301 LGLAAQDINLALDKLSQYSSTSTVTAIQSNGAGVGNVIAIDVDPEGVVSAVYDNSQIRKI 360 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 +I +A F N + LA+ N + T +G + AG G G ++ +LEAS VDLS E Sbjct: 361 AKIGVATFPNPDALAAVSGNAYRPTIPAGEMTVKEAGIGGAGKISPSSLEASTVDLSAEF 420 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +I Q+ Y ++++ I T DQ+L L+N++ Sbjct: 421 TGLIATQKAYSASSKIITTADQMLEELINIK 451 >UniRef50_Q63D88 Flagellar hook protein n=35 Tax=Bacillus cereus group RepID=Q63D88_BACCZ Length = 437 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 120/447 (26%), Positives = 190/447 (42%), Gaps = 62/447 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A +++G+NAA L V NNIAN+ T G+K A F D+ Sbjct: 4 ALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDE 104 +G GVK +G + DF+DG+ T T ++ AI NG F + D N G+V Y+R G F + + Sbjct: 64 KSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFGVSK 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + G + GY I + P+ I IP + + T A++ NL + Sbjct: 124 DNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPRNQN 183 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----------------GDNN 207 TVFD++GN+ + V + G+ Sbjct: 184 AL---------------SHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKPKAGEYT 228 Query: 208 WQVYTQDSSD------PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS 261 + V ++ S P L F+ G L + T ++ Sbjct: 229 YSVSVRNDSKNEKEFKPIVGMPDDKPLIFDNLGNLKQTDEPVQKDPVTGEITKGGTITIP 288 Query: 262 F-------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 F L+ + + T G Y I+D G V+ YS+ +++GQ+ Sbjct: 289 FGDGLTLDLSGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSMKVVGQL 348 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 +A F N+ GL G+ + AT S+G+ +G AG G + A E+SNVDLS E V++ Sbjct: 349 AVATFPNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDL 408 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++ QR +Q NA+ IK D++LN +VNL Sbjct: 409 MLYQRGFQGNAKVIKVSDEVLNEVVNL 435 >UniRef50_Q89F43 Flagellar hook protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89F43_BRAJA Length = 410 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 120/416 (28%), Positives = 185/416 (44%), Gaps = 21/416 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GV 52 M+ VSG++A + L + +NIAN T G+K + F+ + S G V Sbjct: 1 MSLYGVMRTGVSGMSAQSNKLSTVSDNIANVNTTGYKRASTEFSSLILKSGSGNYDSGAV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLDENRNLVNM 111 + G T T D+A+ NGFF + ++N + Y +R G F D NLVN Sbjct: 61 ETTVRYAISDAGHTQFTTSTTDLAVQGNGFFVVSNANNTQQYLTRAGSFVPDAQGNLVNA 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQ-INLNSSDPLPTVTPF 170 G L G P T + + ++I +T ++ NL+ + P Sbjct: 121 AGYYLLGQPGKVTNFSQNSLSGMQIVNIAQVSQVPVPSTAGTLTTGNLDPKAAVIAGPPG 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----GDNNWQVYTQDSSDPNSIAKTAT 226 AS Y+ K S+ +++ G A + VY T G + WQ+ +S+ S+ T Sbjct: 181 PAS----YSSKSSIVAYNNIGQAVTLDVYMSHTATAAGSDTWQIQAYNSATGTSVGAATT 236 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 A A+ T + A ++ N Q TG + T NG P Sbjct: 237 FTFDTTATGKGALAAASP-TTLSFTVPGGAAVTMDLSNMTQ--TGTDFSFKATVNGSAPA 293 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 + ++D G V N Q L I+LA+ + + L E NV+S +SG A G Sbjct: 294 AIDKVDVDDAGHVTAILKNGQQMTLYTIMLADVPSPDNLTPEPGNVYSTNMNSGNAQAGN 353 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 AGTG GT+ +GALE SNVDL+ EL MI AQR + +N+++ +T +L+ +VNL+ Sbjct: 354 AGTGGLGTIQSGALEDSNVDLADELTGMIEAQRGFTANSKSFQTGADLLDVVVNLK 409 >UniRef50_B7HLV4 Flagellar hook protein n=32 Tax=Bacillus cereus group RepID=B7HLV4_BACC7 Length = 407 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 34/418 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A +++G+NA L V NNIAN+ T G+K A F D+ Sbjct: 4 ALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDE 104 +G GVK++G D+TDGT T TG A+ NGFF + DS G++ ++R G F + Sbjct: 64 KSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFTISS 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + N +G + YPA + + P + +P + + T+ + N+ Sbjct: 124 DYYITNTEGQYVFAYPADSSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIP---- 179 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 AD+ + V+D+ GN M V F + G++N++ +D Sbjct: 180 -----------ADAKQITQELPVYDNAGNTWTMRVEFKQDGEHNYKYKVYMRNDSKKETA 228 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 N + A T + F + + + + T +G Sbjct: 229 FNEVDGAGGEVKFDAVGKPNPVNPEANIPFNGGTVKIDF-SKLTNHPTEKTLAVTDVDGR 287 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 + I D G V+ YS+ + GQ+ +A F N GL G+ ++AT ++G+ Sbjct: 288 AAATVKDCFIADGGYVMVKYSDGSMKAAGQLAVAMFPNEGGLMKTGNGNYTATNTTGILA 347 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G +G G + A E +NVDLS E V++++ QR +Q NA+ IK D++LN +VNL Sbjct: 348 MGVSGQNGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNL 405 >UniRef50_A7GNH9 Putative uncharacterized protein n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GNH9_BACCN Length = 467 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 122/464 (26%), Positives = 185/464 (39%), Gaps = 66/464 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + ++SG++A L V NNIAN+ T G+K A F D+ Sbjct: 4 SLYTSISGMSAMQNALSVTSNNIANAQTVGYKKQKAVFDDLLYNNTVGAKGDDTKAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDE 104 +G GVK +G + D+ G+ T TG VAI NGFF + DS G+ V Y+R G F E Sbjct: 64 KSIGNGVKFSGTSTDYNGGSITMTGINGQVAIEGNGFFVVGDSQGNGVQYTRKGTFGKSE 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 N +VN +G + Y ISIP + + + ++ S+ NL S D Sbjct: 124 NNYIVNGEGQYVLAYKLDEDGKP-DTSHPAGPISIPLGSAIDGEVSSKGSLIGNL-SRDN 181 Query: 164 LPTVTPFSASNADSYNKKGSVTV----------------------FDSQGNA-------- 193 + F N N V + D +GN Sbjct: 182 KKIIHDFPVFNKSGDNITMRVQIEQVTELVDPDLPIGADGKPILPKDDKGNPIKPEKVEK 241 Query: 194 -----HDMSVYFVKTGDNN--WQVYTQDSSDPNSIAKTATTLEFNA-NGTLVDGAMANNI 245 + +V N + D + TLEF+ G L A Sbjct: 242 PVPGKYKYTVLTRNNSKNEKEFTPIADDKAPGEKKPTLTKTLEFDPITGKLTRTDEAVVR 301 Query: 246 ATGAINGAEPATFSLSF--------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 + + F L+ + + + NG + Y+I+D+G Sbjct: 302 DPVTKEVIKGGQVDIPFGGDTFKLNLSQLTNLPTKDTLDHKDVNGRAAAVAMDYKISDNG 361 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 V+ YS+ T+ + Q+ +A F N +GL G+ + T S+G +G A G + Sbjct: 362 YVMVTYSDNSTRAVSQLAVATFKNQDGLMKVGNGNYVPTASAGDPFIGVAEQNGAGKIIG 421 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 GA E SNVDLS E V++++ QR +Q NA+ IK D +LN +VNL Sbjct: 422 GAQEGSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDDVLNEVVNL 465 >UniRef50_Q2CGG5 Flagellar hook protein FlgE, putative n=3 Tax=Rhodobacteraceae RepID=Q2CGG5_9RHOB Length = 432 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 109/437 (24%), Positives = 175/437 (40%), Gaps = 47/437 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A A ++ I NIAN+ T GF+ F+ M + I +D Sbjct: 6 AMKTGVSGLQANAASVANISENIANANTDGFRRS---FSQMVTTTTTNPSSMSGVIARDR 62 Query: 62 ----TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-----YSRNGQFKLDENRNLVNMQ 112 T G+ T D+A+ GFF + +R G F DEN NL N Sbjct: 63 IDMGTPGSMRPTDSATDLALEGGGFFVVSQRPDEPLASNYMLTRAGSFTPDENGNLKNAA 122 Query: 113 GLQLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 G L G+P T + + +++ + TTT ++ NL + + Sbjct: 123 GFYLAGFPTDQNGQTGGIDRTSFGDLSTVNVLERSIQGAPTTTIALSGNLPAQESGLATP 182 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 ++ Y F+ G A + + ++ + + N DPN T Sbjct: 183 GAPFISSAEY--------FNPLGGAERLELRWLPSMNKNEWTLEISGPDPNQPPYGWVTA 234 Query: 229 EFNANG-------TLVDGAMANNIATGAINGAEPATFSLSFLN----------------S 265 F +G T + AT ++ N Sbjct: 235 TFEDSGPNAGSPLTYQGMPNGGGANFAFNDATGQATLTIDNGNTPQVITLDLGAPGEFDG 294 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 M Q G ++G + G+L +I +DGTV G + N Q L + +AN +N EGL Sbjct: 295 MTQFAGDYTPPQIDRDGSEAGNLARVEIENDGTVFGFFDNGQRMSLFSLPVANVSNPEGL 354 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 + N + +++SG LG AG G ++ GALE SNVD+++EL ++I QR Y +NA Sbjct: 355 VAGNGNAYKLSRASGAMTLGIAGGGGTASIYAGALEGSNVDIAEELTDLIATQRAYSTNA 414 Query: 386 QTIKTQDQILNTLVNLR 402 + + T D++L+ ++ Sbjct: 415 KVVTTADEMLDETTRIK 431 >UniRef50_C5SMJ1 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMJ1_9CAUL Length = 472 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 114/466 (24%), Positives = 179/466 (38%), Gaps = 65/466 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGI---- 57 + V+GL A + L I NNIANS T +K F + S G G+ Sbjct: 6 SMQAGVAGLAANSNALSAISNNIANSTTTAYKRVRTDFQSIVTASSTPTGYNAGGVISTT 65 Query: 58 -TQDFTDGTTTNTGRGLDVAISQNGFFRLVD-----SNGSVFYSRNGQFKLDENRNLVNM 111 T GT LD+ I GFF + + ++R+G F DE+ L N Sbjct: 66 RHMISTLGTLQKASSQLDLGIDGQGFFITTQKSEPGAEDARLFTRDGSFFADEDGYLRNA 125 Query: 112 QGLQLTGYPAT---GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL---- 164 L L G+P T G + + I++ N + TT A + NLN++ + Sbjct: 126 SNLYLQGWPITAGGGPTLSAADLSQLRTINVENIAAQIEPTTFAEIVGNLNANQTISDRA 185 Query: 165 --------------PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV--------- 201 + + + + + ++ V DSQG ++V + Sbjct: 186 DEYAASPTTLPMATYDASAPDTTTSTRPDYEITIPVSDSQGGERRLTVSMIKLAADPTAT 245 Query: 202 -KTGDNNWQVYTQDSSDPNSIAKTATT-----------LEFNANGTLVDGAMANNIATGA 249 N W +S AT L +N+ G L D + +TGA Sbjct: 246 PPIAANTWAYEVWSPDVKDSTISPATEASTNGIVSRGHLVYNSAGKLTDIVDSTGTSTGA 305 Query: 250 IN-------------GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 + A+ + + + +G L QI+ + Sbjct: 306 TSLNLSFNWNSAIGVAAQTVQVEFNGDQGGLTQLNSASTNRVDADGTPFSGLDKVQISKE 365 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G V + N T+ + Q+ LA F N +GL N ++ + SG L G G L Sbjct: 366 GLVTAVFKNGSTRDIAQLALATFVNADGLTPVSGNAYTVSNDSGPLTLKVPGVSGAGLLG 425 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G LEAS+VDLS+E N+IV QR Y +N++TI T D++L L+N++ Sbjct: 426 VGTLEASDVDLSEEFTNLIVTQRAYSANSRTITTADEMLQELLNIK 471 >UniRef50_UPI0001BCD67A flagellar hook protein FlgE n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD67A Length = 524 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 134/522 (25%), Positives = 209/522 (40%), Gaps = 123/522 (23%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL + T +DVIGNNIAN T GFK+G +F DM + + Sbjct: 4 SLFSGVSGLKSHNTRMDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAASPGTTIGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV V GI F+DG+ +TG+ D+A++ N F + + +Y+RNG F+ D Sbjct: 64 PKQVGLGVSVGGIDTIFSDGSVQSTGKNTDLALTGNALFVVKRGD-QTYYTRNGAFEFDA 122 Query: 105 NRNLV-NMQGLQLTGYP--ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLN-- 159 N V GL + G+ T +GA + +M + T T S NL+ Sbjct: 123 KGNYVLPSSGLHVQGWMNKTTNNSKVSTEGAAENIVIDAGRIMGPEQTDTVSYSENLDAN 182 Query: 160 -----------------------------------------SSDPLPTVTPFSASNADSY 178 S TVT + + S Sbjct: 183 TPIITGYSFSDPRTTPPTPHARTTSGMYITASQAQPVTLSLSDGTKQTVTSGTYTIGRSM 242 Query: 179 NKKGSVTVFDSQGNAHDM----------SVYFVKTGDN-------NWQVYTQDSSDPNSI 221 K S +DS GN H+ +V + N W + + N+ Sbjct: 243 PKVTSFGYYDSSGNKHEGLLILEKADSRTVTYQDADGNSVTKRASTWIARVGNPTARNTG 302 Query: 222 AKTAT------TLEFNANGTLVDGA-------------------------------MANN 244 T T TL F+ NG L G A Sbjct: 303 GSTTTHTLSSATLAFDENGVLRAGVLGGTSPNLTHDTDSPVTPPAVPPAVSANSIENATF 362 Query: 245 IATGAINGAEPATFSLSFLNS---MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 AT + + P + ++ F N+ + Q G + + A NGY G L S ++ G + G Sbjct: 363 TATHSNAVSSPQSITVQFANNESPLTQYAGYDTVKAAA-NGYASGSLASVSVDSTGVITG 421 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG-TLTNGAL 360 Y+N + QI +A F+N GL G +++ + +S ++ + G +T AL Sbjct: 422 TYTNGVRRAEAQIGVAKFSNPSGLTKIGGSLYQESNNSNSKVVRAQTVESTGAKITPSAL 481 Query: 361 EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E SNVD++ + +MI+ QR +QSN++ I D++L TL+N++ Sbjct: 482 EMSNVDIADQFSDMIITQRGFQSNSKVITVGDEMLETLINMK 523 >UniRef50_Q28JM2 Flagellar hook protein FlgE putative n=30 Tax=Bacteria RepID=Q28JM2_JANSC Length = 452 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 110/440 (25%), Positives = 187/440 (42%), Gaps = 48/440 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSKVGLGVKVAGI 57 + + V+GL+ A+ L I +NIANS T G+K TA F+ M G+ GV+V Sbjct: 19 SLNAGVAGLSVNASRLATIADNIANSGTNGYKRATADFSSMVIDQGGGTYSAGGVRVTTG 78 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG---------SVFYSRNGQFKLDENRNL 108 G T G D+A+ GF + S+ ++ + G F+ D + L Sbjct: 79 RLIDQSGALATTNNGTDLAVRGRGFLPVTRSSAVNAAAGAELPLYLATTGSFRTDADGYL 138 Query: 109 VNMQGLQLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 V G+ L G+PA A + + ++ TT S+ +NL +D Sbjct: 139 VTSSGVTLMGWPADADGNVPSFPRDTSAGLEPVQVNVNQFTSEPTTRISLGVNLPGTD-- 196 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------GDNNWQVYTQDSSD 217 + S + ++ SV FD+ G + + +F T N W + +DS+ Sbjct: 197 ------TTSESSGDTRQLSVEYFDNLGTSQSIEAFFTPTVPVVGDPASNTWTMTLRDSAS 250 Query: 218 PNSIAKTATTLEFNA--NGTLVDGAMANNIATGAINGAEPATFSLSFLNS---------- 265 N++ T + ++ G + TG A T ++ L Sbjct: 251 NNAVIGEYTVVFDDSRTGGGTIQSVSQPLPVTGGGWSATEGTLTVDVLGGPIEINIGAQG 310 Query: 266 ----MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 + Q + + +++G G+LVS +++ +G V N+ T+ + QI L + N Sbjct: 311 SGSGLTQLSDNFAPTSISKDGSPVGNLVSVEVDPNGFVKANFDVGITRTVYQIPLIDLPN 370 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL +E + +++ + SG L AG G G + ALE S D++ EL +I QR Y Sbjct: 371 PNGLIAEDNQLYTTSAESGSFFLWDAGDGPTGDVVAFALEESTTDVAAELTQLIQTQRAY 430 Query: 382 QSNAQTIKTQDQILNTLVNL 401 SNA+ I+T D++L N+ Sbjct: 431 SSNAKIIQTVDEMLQETTNI 450 >UniRef50_C6XM57 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM57_HIRBI Length = 458 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 114/452 (25%), Positives = 187/452 (41%), Gaps = 51/452 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-----FAGSKVGLGVKVAG 56 A +GL A A+ + NIAN T GFK F M + S V+ Sbjct: 6 ALLAGTAGLRANASAMAATSENIANVNTVGFKRIRNDFTAMLNNQNYQSSYSAGAVRATA 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG------SVFYSRNGQFKLDENRNLVN 110 T GT ++ +AIS G+F G Y+R GQF DE L N Sbjct: 66 TTLMREQGTLQSSSVSTHMAISGEGYFVTRARGGDATSFDEYSYTRAGQFAPDEGGYLKN 125 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTN---ISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 G L G+P + T + + A+ + S+ NLN+ + Sbjct: 126 TAGQYLYGWPIVNDQVVNASPTDLTALSAVRVSGYGGVAEASANLSITANLNADQEVNPA 185 Query: 168 TPFSASNAD---SYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQV--YTQDSSDP--- 218 T + A + + + V+DS+G H ++ F+KT + N W+V Y S+D Sbjct: 186 TYTAGDMAAGNITPDFTTPLEVYDSKGGRHTVNFSFLKTANANEWEVEAYVTPSTDIEGV 245 Query: 219 ------------------NSIAKTATTLEFNANGTLVDGA-------MANNIATGAINGA 253 + +A A F+ G++ GA A G A Sbjct: 246 TDGLLANGKMIFTASGLIDPVATNALADGFDPEGSISIGASDPASVGTTPRWADGLGIEA 305 Query: 254 EPATFSLSFLNSMQ---QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 + L NS Q + + + +T +G G L S +++DG V+ Y+N ++ Sbjct: 306 QDIQLDLGNGNSTTGLTQYSSDSILDTSTVDGVPFGSLASVDVDEDGVVIAQYTNGFSRK 365 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 + Q+ +A F N GL ++ + + +G L +G G + + ALE+S VDL++E Sbjct: 366 IFQVPVATFGNEGGLIAQAGGSYRSGPETGDMNLRAPKSGEAGEVISSALESSTVDLAEE 425 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 N+IV QR Y + ++ I T D++LN L++++ Sbjct: 426 FSNLIVTQRAYSAASKIITTADEMLNELISIK 457 >UniRef50_C4G364 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G364_ABIDE Length = 495 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 111/492 (22%), Positives = 194/492 (39%), Gaps = 92/492 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+GL T +DVIGNNIAN T GFKS + F+D+F + Sbjct: 4 SLFSGVAGLKVHQTKMDVIGNNIANVNTVGFKSSSTVFSDVFYQTTQTASGPNKESNVGG 63 Query: 47 ----KVGLGVKVAGITQDFTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFK 101 ++GLG V+ I+++ TD G + T LD I+ + FF + + G ++++NG FK Sbjct: 64 VNPKQIGLGANVSSISKNITDPGGSQTTNNALDCMINGDSFF-VTKNGGRTYFTKNGAFK 122 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI---PNTLMAAKTTTTASMQINL 158 +D + LVN +G ++ G+ P + +N++I N + TT + N+ Sbjct: 123 VDTDGTLVNSEGAKVQGWQVDPDDPNKIKPGPVSNLNIMSPENMYTNPEATTAGYLSGNI 182 Query: 159 NSSD------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN----NW 208 + +D + + Y + S+ + + ++ + + Sbjct: 183 DRTDSQIAPGSAGRTFQMNFYDNLGYEYTAKFVMKQSKNSDNAYNIELKDILKDGKSIMY 242 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM-- 266 +D L +++ G N +P F++ F + Sbjct: 243 NAEKKDDGSIEYTTTGWGATLSKDKQELSSVGTVDSVDDGKPNFGDPGKFNMVFDGTTGK 302 Query: 267 ---------------------------------------------------QQNTGANNI 275 Q + Sbjct: 303 FKSLVEDPSDEYDPSGMDDTVIKKMYLNIGGKTPNPFKNIELDFSQMTMFASQTSSKIES 362 Query: 276 VATTQNGYKPGDLVSY----QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 +G G + I++ G + G+Y N +LLGQI +A+F N GL + G++ Sbjct: 363 TMGDVDGNGKGKMKGTMKGATIDNAGKIYGSYDNGDLKLLGQIAVASFKNPSGLEAVGNS 422 Query: 332 VWSATQSSGVAL-LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 + T +SG +G T + G ++ G LE SNVDL+ + +MI QR +Q+N++TI T Sbjct: 423 NFVETMNSGKFDGVGKDITTDGGKISTGMLEMSNVDLAAQFTDMITTQRGFQANSRTITT 482 Query: 391 QDQILNTLVNLR 402 D IL L+NL+ Sbjct: 483 TDSILEELINLK 494 >UniRef50_C2PD26 Flagellar hook protein FlgE n=1 Tax=Bacillus cereus MM3 RepID=C2PD26_BACCE Length = 441 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 113/436 (25%), Positives = 186/436 (42%), Gaps = 36/436 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A +++G++A L V NNIAN+ T G+K A F D+ Sbjct: 4 ALYTSITGMSATQNALSVTSNNIANAQTAGYKKQKAIFDDLLYNNTVGSRGDGSYAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDE 104 +G G+K +G DF+DG+ T TG ++ AI NG F + D NG +V Y+R G F + Sbjct: 64 KSIGNGLKFSGTATDFSDGSITLTGEKMETAIEGNGLFLVGDRNGGNVEYTRKGSFGVSA 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + G + GY + + P+ I +P T + T A++ NL+ + Sbjct: 124 DNFITATGGQYVLGYGVKPGTQEVDFSSQPSAIKLPVGTAIGGSVTDKATLGGNLSRNQS 183 Query: 164 LPTVTPFSASN-ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD----- 217 + + + + + + D + G+ + ++ S Sbjct: 184 DLSTDFTIYDDEGNKITLRMDIKQNTKKETVGDKEIDTPIQGEYTYTFSMRNDSKNEKEF 243 Query: 218 ----PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF--------LNS 265 + A ++F+ G L + T + F L Sbjct: 244 KPVLGENDAPITKNMKFDKAGKLERLDEDVQRDPNTKEITQGGTIKIPFANQNLELNLGG 303 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 + I AT G Y I+D G V+ YS+ +++GQ+ +A F N+ GL Sbjct: 304 LTNYPTGKTITATDVAGRPAAIANDYSISDGGFVMMRYSDGSMKVVGQLAVATFPNSGGL 363 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 G+ + AT SSG+ +G AG G + GA E+SNVDLS E V++++ QR +Q NA Sbjct: 364 MKSGNGNYIATPSSGIPAIGVAGENGAGNVRGGAKESSNVDLSVEFVDLMLYQRGFQGNA 423 Query: 386 QTIKTQDQILNTLVNL 401 + IK D++LN +VNL Sbjct: 424 KVIKVSDEVLNEVVNL 439 >UniRef50_C6NWL1 Flagellar hook protein flgE n=2 Tax=Proteobacteria RepID=C6NWL1_9GAMM Length = 419 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 156/423 (36%), Positives = 235/423 (55%), Gaps = 29/423 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLGV 52 AFS A+SGL AA T+L V+GNNI+N+ T GFKS A FAD + + +VG+G Sbjct: 3 AFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGIGT 62 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 +V + Q FT G T LDVAI+ NGFF+L + NG + YSRNGQF+L+ +V+ Sbjct: 63 RVMTVAQQFTQGNIQTTNNPLDVAINGNGFFQL-NYNGDIVYSRNGQFQLNSGGVIVDGN 121 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G +L G A T G +++ + + ++ ++ +NLNS++ + F+ Sbjct: 122 GAELLGIQAQNGKLTGATG----PLTVSQNALPPQASSGITLALNLNSTNQNLSGAAFNI 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN------------- 219 ++ ++YN S T++DS G ++ Y+ N Sbjct: 178 NDPNTYNYSTSNTIYDSLGTPQLVTTYYQLVSGGTGSTTATSGETWNVYYSATGTTGSGG 237 Query: 220 SIAKTATTLEFNANGTLVDGAMAN-NIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 + + L F++ G LV G N N +GA+ +T ++S+ S N N +V+ Sbjct: 238 ITSGSLGQLVFSSTGQLVSGGPFNVNPPLNWQDGAQSSTLNVSYSGSTNYNA-PNAVVSA 296 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 T NGY G L I+ G + YSN Q+Q+LGQI L FANN GL + G+N W+++ S Sbjct: 297 TTNGYGVGQLTGLSIDPGGNIYARYSNGQSQVLGQIALTRFANNNGLQNLGNNYWASSYS 356 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG+ L G G+ N G L +GA+E SNV+LS++LVN+IVAQ+ YQ+NAQTIKTQ+ ++ TL Sbjct: 357 SGLPLSGAPGSTNLGVLQSGAVEQSNVNLSQDLVNLIVAQQAYQANAQTIKTQNTVVQTL 416 Query: 399 VNL 401 ++L Sbjct: 417 LSL 419 >UniRef50_A7HW68 Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW68_PARL1 Length = 454 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 192/454 (42%), Gaps = 59/454 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK----VGLGVKVAGI 57 + + A++G+ A ++ L I +NIANS T GFK +F D+ S + V A Sbjct: 6 SMTTAITGIRAQSSALGHISDNIANSQTIGFKRTDTNFQDIVTASTSRNHLPGAVLAAPS 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDS----------NGSVFYSRNGQFKLDENRN 107 + G+ + +AI+ +GFF + + +Y+R G F +D+ Sbjct: 66 FTNNVQGSIDASEVPTHMAINGSGFFVVSARVATVDGNPVFDNVNYYTRRGDFSMDKYGY 125 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS------- 160 LVN G L G G P+ I I +AA+TT+T S + NL + Sbjct: 126 LVNGGGYTLQGLAIDPVTGN-PVGDTPSRIQINRDFLAARTTSTISYKANLPAWPKTVNA 184 Query: 161 ---------------SDPLPTVTPFSASNADSYNKKG----SVTVFDSQGNAHDMSVYFV 201 + L ++ SA+N D + +VT +D G ++ + Sbjct: 185 DPAIANSELLTVGRFTPALADLSVISAANEDIFLDNSLSGGAVTGYDELGAPANVQFRWA 244 Query: 202 -----KTGDNNWQVYTQDSSDPNSIAKTAT----TLEFNANGTLVDGAMANNIATGAING 252 G + W ++ + S F+ G L + I +NG Sbjct: 245 KIDNEDGGGDTWNLFYKTSDSATGATDKWVNVGQDYAFDGQGRLTPAVDSTTITGLTVNG 304 Query: 253 AEPATFSLS-FLNSMQQNTGANNIVATT---QNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 +L +++ Q N V TT QNGY G+LVS ++++G + G YSN +T Sbjct: 305 VSLGNVTLDHGASNVTQFEDDNGTVKTTELDQNGYPSGELVSIAVSENGRITGTYSNGKT 364 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 L Q+ LA F ++ L ++ATQ SG +LG G + A EASNVD++ Sbjct: 365 VDLAQVSLATFNASDKLKKLDGTAFAATQESGEPMLG-----GGGDIIASAREASNVDIA 419 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E +IV Q+ Y + + + T D+++ +N++ Sbjct: 420 DEFSKLIVTQQAYTAGTRIVTTADELIRETLNMK 453 >UniRef50_B7GGB1 Flagellar hook protein FlgE n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GGB1_ANOFW Length = 460 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 125/480 (26%), Positives = 180/480 (37%), Gaps = 103/480 (21%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----------------- 44 + + G+ LDVIGNNI+N TYG+K +F D+ + Sbjct: 4 SMFTGIGGIRNFQYKLDVIGNNISNVNTYGYKKARVTFKDLVSQQISAATSSTGTRGGIN 63 Query: 45 GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-------------- 90 G ++GLG + I T G+T T R LD+A+ +GFF + N Sbjct: 64 GKQIGLGSGLGSIETIHTQGSTQTTSRPLDLALGGDGFFVVGSINDVTLISMDGPAGKLG 123 Query: 91 --------------SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTN 136 ++ ++R G F LDE +VN G L G A T+ A Sbjct: 124 TNKVNTGVPIDRVFNLSFTRAGNFYLDEYGYIVNSDGQYLIGEAAIKDVDTVITNA---- 179 Query: 137 ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 ++ LNS+ D D+ Sbjct: 180 --------PHVAQARRDLETFLNSTLVNFIKKWKDEFTKDP----------DNNPTTQTD 221 Query: 197 SVYFVKTGDNNWQVY---TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGA 253 V F++ +N + +DPN FN + A N + N A Sbjct: 222 FVNFIRNFNNELKNLNEKITGKTDPNDTTLATAGTYFND--RVSPKASINPVPLLPENEA 279 Query: 254 E-PATFS-------------LSFLNSMQQNTGA-NNIVATTQNGYKPG------DLVSYQ 292 + P T + F+ S+QQ + ++PG S+ Sbjct: 280 DWPDTLAEAEKMMGPYLEGISGFVESVQQVLQDYSEPKYGNVTSFEPGLIQIPKTAKSFG 339 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG----------VA 342 I DG V SN Q ++ GQI+LA F N GL G N + T +SG + Sbjct: 340 ITADGKVTFIDSNGQLKIAGQILLAQFPNPTGLEKMGGNTFKETNNSGKLDRNANGLTIN 399 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L G G + +GALE SNVDLS+E MIVAQR +Q+N + I T D+IL LVNL+ Sbjct: 400 ELSRPGLNGAGEIISGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLK 459 >UniRef50_C4ZAN8 Flagellar hook protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAN8_EUBR3 Length = 477 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 127/474 (26%), Positives = 199/474 (41%), Gaps = 74/474 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVSGL T +DVIGNNIAN T FK+ + F+++ + Sbjct: 4 SLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGASAGNGAAGTGG 63 Query: 47 ----KVGLGVKVAGITQDFT-DGTTTNTGRGLDVAISQNG---FFRLVDSNGSVFYSRNG 98 ++GLGVK + T G+ TG D+ ++ FF + D + ++R G Sbjct: 64 KNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGT-NRLFTRAG 122 Query: 99 QFKLDENRNLV-NMQGLQLTGYPATGTPPTIQQGANPTNI-SIPNTLMAAKTTTTASMQI 156 F +D N L + G L G+ I+ + + S A + TT A + Sbjct: 123 DFYVDGNGYLCMSSTGYTLQGWQVDAKGTVIKDTVSSLQVMSSATKTSAPEATTKAYVSG 182 Query: 157 NLNSSD--------------------PLPTVTPFSASNADSYNKKGSVTVFDSQGNA--- 193 L+ +D +N D + DS+GN+ Sbjct: 183 VLDKNDAQAADTGRIITIGFFDDLGYNYTAKFGIKKTNTDGTYDVTLKDIVDSKGNSIFD 242 Query: 194 -HDMSVYFVKTGDNNWQVYTQDS--SDPNSIAKTATTLEFNANGTLVDGAMAN------- 243 + G N +Y+ DP +I + A+ + + GT + AN Sbjct: 243 VDKDGNFITSQGPNGQTMYSYKGRAVDPQTIFEDASLVFDQSEGTFTSISSANSPAAKTI 302 Query: 244 -------NIATGAINGAEPATFSLSFLNSMQQNT-GANNIVATTQN------GYKPGDLV 289 N +ING+ + + F SM N G + I + G G L Sbjct: 303 NLNLSVLNTQDASINGSNFSNIEVDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGALT 362 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL-LGTAG 348 ++DDG + G+Y N T LL QI +A FAN GL GDN + +T +SG +G Sbjct: 363 GITVSDDGKIYGSYDNGNTVLLCQIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGVEI 422 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + + G++++G LE SNVDLS + +MIV QR +Q+N++ I T D +L L+NL+ Sbjct: 423 SADGGSISSGELEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLK 476 >UniRef50_A0NPJ1 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NPJ1_9RHOB Length = 463 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 118/462 (25%), Positives = 196/462 (42%), Gaps = 68/462 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGIT--- 58 A + AVSGL A A L+ I N+ANS T G+K +F+D+ +G +V+G T Sbjct: 6 AINSAVSGLAAQAKALENISGNVANSQTTGYKRLDTTFSDLVSGGGSKQAQQVSGTTFAT 65 Query: 59 ---QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------SVFYSRNGQFKLDEN 105 + G T+ +AI+ G+F + ++ +Y+R G F+ D+ Sbjct: 66 SRATNTVQGDITSVDVDTYMAINGPGYFVVTKASDVVDGSTTFADETYYTRAGDFERDKE 125 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L+N G L G+P G NPT I I N +AA TT Q NL Sbjct: 126 GYLINSSGYYLQGFPLDPNTGN-AIGDNPTVIQIENQPLAASATTAVDYQANLPRVPATN 184 Query: 166 TVTPFS-----------------ASNADSYNKKGS---VTVFDSQGNAHDMSVYFVKTGD 205 A+ AD N S +T+++ G A + V + KT + Sbjct: 185 DYDGTDESTALLNATVGAGNVAVANEADFLNSSISGGSITIYNQNGTAMPVEVRYAKTAN 244 Query: 206 ---------NNWQVYTQDSSDPNSIAKTATTLEFNANG---TLVDGAMANNIATGAINGA 253 + W +Y D T++F+ G TL GAMA + G+ +G Sbjct: 245 YDAGPPVVEDAWTMYIGTGGDATDAWYDVGTIQFDDTGEMTTLTAGAMAGSAVNGSGDGF 304 Query: 254 EPATFSLSFL-----------NSMQQNT---GANNIVATTQNGYKPGDLVSYQINDDGTV 299 ++ ++ S+ Q + G + V+ Q+G+ G+L ++ G V Sbjct: 305 TISSLTIGGTTAANVEFSFADGSLTQYSDKDGRASSVSLDQDGFPAGELTGVAVDASGRV 364 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 + +YSN Q + + QI LA F + L ++AT SG A L G + Sbjct: 365 IASYSNNQQRPVYQIPLATFQAEQDLQRVDGAAFAATAGSGDADL-----SGGGQILAKK 419 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +E SN D++ E +I+ Q+ Y +N++ + + D++L+ +N+ Sbjct: 420 VELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDDALNM 461 >UniRef50_Q0G073 Flagellar hook protein E n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G073_9RHIZ Length = 390 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 123/414 (29%), Positives = 187/414 (45%), Gaps = 45/414 (10%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQ--- 59 F +VSG+NA + L + +NIANSAT G+K F+ + S G G +G Sbjct: 7 FRTSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSG-GRGNYTSGSVLSQT 65 Query: 60 ---DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL-----DENRNLVNM 111 T G T T D+AIS +GFF + D NG F++R G F LVN Sbjct: 66 RYDISTQGLVTTTSSKTDLAISGDGFFVVEDQNGQPFFTRAGSFVQRTEPDTGETFLVNA 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G +LTG + +P ++A + TTT+ + + L + Sbjct: 126 AGYKLTGQNG--------------PVQVPVGEIVAPQATTTSELSMQLPLNGTG------ 165 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY--TQDSSDPNSIAKTATTL 228 GS T F+S+G A ++S+ +TG + W + +S P +++ T Sbjct: 166 --------THTGSFTAFNSRGEAVNVSMTATRTGADQWDLTFDAPSASAPVTVSVTFDAA 217 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 N + + G P+T +L+ L + A A NG Sbjct: 218 TGLPNPPITTAGNLQIVPPANGGGGAPSTVALN-LGQLTSYDAAFTFQAEA-NGNPATGF 275 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 + I+DDG V G + + L +I LA F + + L NV+ +Q SG G +G Sbjct: 276 SDFTISDDGRVFGILTTGRQIELDRIQLARFQSPDQLDVISGNVFRPSQLSGDPQFGFSG 335 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG L +GALE SNVDL+ EL +MIV QR+Y +N++T +T ++L+ LVNL+ Sbjct: 336 ELGFGDLISGALEESNVDLASELTDMIVTQRSYAANSKTFQTGSEMLDLLVNLK 389 >UniRef50_B8J3H7 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3H7_DESDA Length = 499 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 127/500 (25%), Positives = 202/500 (40%), Gaps = 104/500 (20%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +G+ A ++V NN+AN +T G+K F+D+F Sbjct: 4 SLYIGATGMKGLAEGMNVTTNNLANVSTIGYKQQGILFSDIFYAEQGGMGNWWNAQDNSR 63 Query: 46 ---SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 +VG+G++V + F G ++ D+AIS GFF++ D ++Y+R G F+ Sbjct: 64 VALGQVGMGLQVESVRTLFGQGALESSNTVTDMAISGKGFFQVTDGV-DLYYTRAGDFRP 122 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAA-KTTTTASMQINL--- 158 D L GL L GY I+I K+TT+ M+ NL Sbjct: 123 DREGVLRTPSGLALNGYKYNADGSK----GGLQQITIDKFATMPSKSTTSVDMRFNLGLE 178 Query: 159 ---NSSDPLPTVTPFSASNAD--------SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN 207 ++ P + + +A+ +Y S+T++ GN ++YF + Sbjct: 179 TPNSTDAANPYFSLLNTYDANASPPLSNLAYGYAQSITLYGENGNQQQATIYFDAAPSDR 238 Query: 208 ------------WQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE- 254 ++ P + A TL F+A G L D A G+ + A+ Sbjct: 239 PGSVVQYLISTGNTPRDENGLAPGTGALMTGTLTFDAKGQLTDMTAFTPSAEGSKDLADW 298 Query: 255 -PATFSLSFLNSMQQNTGANNIVA------------------------------------ 277 P+ S L M N A + Sbjct: 299 APSALSDGGLPQMTVNGVATTVNLGISAAGGWQNAPANAAAVGASQNALGGMGQDATVAV 358 Query: 278 ---------------TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 QNGY G L + I+ +G VVG +SN Q+ L QI + F + Sbjct: 359 DATTNYKGSSPVTRRNNQNGYPEGFLSNISISANGDVVGLFSNNQSMDLWQIPVCRFTSE 418 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 +GL EG N++SAT +G +G AGT N+GT+ +E SNVD++ E+ NMI+ QR +Q Sbjct: 419 DGLRREGHNMFSATADAGQMDMGEAGTENYGTIRAYNIENSNVDVATEMANMIITQRGFQ 478 Query: 383 SNAQTIKTQDQILNTLVNLR 402 SN++ + T DQ+L V L+ Sbjct: 479 SNSKVVTTADQMLQKAVELK 498 >UniRef50_A8TLX3 Flagellar basal body FlaE domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLX3_9PROT Length = 433 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 110/439 (25%), Positives = 186/439 (42%), Gaps = 50/439 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----KVGLGVKVAG 56 VS L A + +I +NIAN T G+K TA F + S GV Sbjct: 6 GMFSGVSALAAQSQAFGIISDNIANVNTIGYKDTTARFQTLVTESSSSSRYSPGGVLARP 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN------GSVFYSRNGQFKLDENRNLVN 110 G T D+++ +GFF + +++ G +R G F DE NLVN Sbjct: 66 FVNPEKQGLLQGTTSNTDISLVGDGFFIVNENDDPLTSGGEYLLTRAGSFTEDEEGNLVN 125 Query: 111 MQGLQLTGYPATGTPPTIQQG-----ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 G L G+ T + ++ +++ + ++TA++ +NL ++ Sbjct: 126 AAGFFLQGWRTDSTGTIVNSNTKDQLSSLETVNLAGFTSVSNPSSTANLAVNLPANATTA 185 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD---PNSIA 222 + + ++T+FDS G H M++ + K N Y+ D ++ + A Sbjct: 186 S------------TQTTNLTIFDSLGVEHLMTINWTKNAQANEWAYSLDVTNQAGTTTAA 233 Query: 223 KTATTLEFNA----------NGTLVDGAMANN------IATGAINGAEPATF---SLSFL 263 A T++F+ GTLVDG A +A G+ A ++ Sbjct: 234 IVAGTIDFDPADGTIEDIDNGGTLVDGDTAQTTLPITALAFGSGAAASSIVINWGTVGQT 293 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 N M Q +G+ QNG P L + +I+++G V + N T+ + +I + Sbjct: 294 NGMSQLSGSYEATLLNQNGSSPSALTAVEIDNEGVVTARFKNGDTRPIYKIAIGTVPAAT 353 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 L SE N + + SG LL AG G + + ALE S VDLS E ++I+ QR Y + Sbjct: 354 ELRSENGNAYKLSSRSGDLLLTEAGLQGAGAIESSALEQSTVDLSDEFTDLIITQRAYSA 413 Query: 384 NAQTIKTQDQILNTLVNLR 402 + I T D++L+ ++ ++ Sbjct: 414 ATKLITTGDELLDEIIRVK 432 >UniRef50_C7M216 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M216_ACIFD Length = 431 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 131/443 (29%), Positives = 202/443 (45%), Gaps = 59/443 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + S A+SG+ A LD I NNIAN+ T G++S FAD+ + Sbjct: 4 SLSSAISGIEANQEWLDNIANNIANANTTGYQSTQTEFADLLYQQQSAAGGPVPGQTGGT 63 Query: 48 ----VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 VG GV+V+ DF+ GT TG DVAI G F +V+ G +Y+R+G +LD Sbjct: 64 NPLVVGSGVRVSATPTDFSQGTIVQTGTSTDVAIQGQG-FLVVNQGGQNYYTRDGALQLD 122 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 LV G + G+ + Q A ++IP + T+T ++ NL + Sbjct: 123 GAGQLVTASGALVMGWVPNAAGQ-VNQNAPLAALTIPQGQVAQPVATSTITLGGNLPAGS 181 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 P V + T +D GN + + F + N T +++ P + + Sbjct: 182 SNPVVV--------------TTTGYDDLGNPVPIQLTFTPSTTANQWTLTAETTPPGATS 227 Query: 223 KTATTLEFNANGTLV-DGAMANNIATGAINGAEPATFSLSFLNS---------------- 265 A T+ ++ T+ D A A + A P +L + Sbjct: 228 PVALTVGGASSQTVTFDPATGQISAISGTSTANPDQLALGGFPTSYDLPAGYAMNLDFPT 287 Query: 266 -------MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 Q + T QNGY G L + I DG + G Y+N +TQ+LGQI LA Sbjct: 288 PGTAQAVTQFAASSPTAQVTNQNGYPSGALAGFTIGSDGVIEGTYANGRTQVLGQIALAQ 347 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 FAN +GL+ +G+ +++AT +SG LG+ G G L GALE+SNV + EL N++VAQ Sbjct: 348 FANAQGLSKQGNLLYAATTNSGAPQLGSPGAAGLGQLVGGALESSNVSIGSELTNLVVAQ 407 Query: 379 RNYQSNAQTIKTQDQILNTLVNL 401 +YQ+N + ++T +L +LV + Sbjct: 408 TDYQANTKVVQTTATVLQSLVQM 430 >UniRef50_D0XTV6 Flagellar basal body FlaE domain protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTV6_9CAUL Length = 425 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 114/430 (26%), Positives = 184/430 (42%), Gaps = 44/430 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A S AVSGL A + L I NIANS+T +K+ F + +G K G + +T Sbjct: 6 ALSTAVSGLTAQSRALSAISENIANSSTTAYKTTDVYFQALVSGGK-GSSTSTSAVTAKS 64 Query: 62 TD-----GTTTNTGRGLDVAISQNGFFRLVDSNGSVF----YSRNGQFKLDENRNLVNMQ 112 + GT T+T +VAI GFF + Y+RNG F+ + + L+N + Sbjct: 65 SQAMSVQGTVTSTSVATNVAIQDAGFFVVTSDPAGAASEDMYTRNGSFETNADGYLINTE 124 Query: 113 GLQLTGYPATGTPPTIQQGAN----PTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 G L G+P + N + I++ + AK TT M N+ + + Sbjct: 125 GFYLMGWPTDAEGNVLASNTNDLTGLSAINLSSIGGTAKATTEIEMSANVPADAAVGAAL 184 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS-------SDPNSI 221 S+ + DS G +H + + KT DN W++ D + +I Sbjct: 185 ------------TTSMQMIDSLGVSHTVGQTWTKTADNTWELTLSDPVLTSDGTTQSGTI 232 Query: 222 AKTATTLEFNANGTLVDGAMANNIA-TGAINGAEPATFSLSF-----LNSMQQNTGANNI 275 T+ FN +G+L A + TG +GA + SL + + Q ++ Sbjct: 233 NGGPYTVVFNTDGSLGSVTPALDFTVTGFSSGAADSAVSLDIGEVGGTDGVTQYASTSST 292 Query: 276 -----VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 V T Q+G G+L I+ DG V N+ N + + QI +A F+N GL Sbjct: 293 IGLEDVQTEQDGALYGELSGISIDSDGLVTANFDNGISLAIYQIPIATFSNPNGLTLVSG 352 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 + ++G L G G G+L ALE S D++ E MI+AQ+ Y + +Q + + Sbjct: 353 TTYDENSAAGQVHLNLPGEGGAGSLVASALEGSTTDIATEFNKMIIAQQAYSAASQVVSS 412 Query: 391 QDQILNTLVN 400 + ++L+ Sbjct: 413 ASDMFDSLIQ 422 >UniRef50_Q24T89 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24T89_DESHY Length = 383 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 110/422 (26%), Positives = 184/422 (43%), Gaps = 65/422 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL +DVIGNNIAN T GFK +F+ M + + Sbjct: 4 SLYSAISGLKNHQIKMDVIGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG V+ I Q T G++ +TG+ D+ I GFF L + NG YSR G F D+ Sbjct: 64 PAQIGLGSMVSSIDQIMTPGSSQSTGKDTDMMIQGKGFFVLQN-NGETVYSRAGAFTQDD 122 Query: 105 NRNLVNM-QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 + L G ++ G+ + S + TT +++ NL + P Sbjct: 123 DGTLTEPGTGAKVMGHMYGMEKSVDTMSTTTEDESKIDW------TTLEAIKFNLGENPP 176 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 +VK+GD W N+ Sbjct: 177 YVLSEATKIPPDA-----------------------WVKSGD-EWVYSNPSLIGVNATTT 212 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 T F+ + T + TF+++ L+ + G + +AT Sbjct: 213 APTGAVFDNTRGTITVTTDP---TKPADDTGIYTFTITNLDG-EYADGTDIPLAT----- 263 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQ---TQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 L S+ ++ G + G YSN + ++++GQ+ +A+F+N+ GL + G++ ++A+ +SG Sbjct: 264 ----LTSFSVDSKGAITGVYSNGEASASRVIGQVAIASFSNDAGLLNLGNSFYAASNNSG 319 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 A +G AG G + +E SNVDLS+E +MIV QR +Q+N++ I D +L L++ Sbjct: 320 QASIGGAGEDGRGNIVPSTVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQELID 379 Query: 401 LR 402 L+ Sbjct: 380 LK 381 >UniRef50_D0XNJ6 Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XNJ6_9CAUL Length = 478 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 113/472 (23%), Positives = 190/472 (40%), Gaps = 71/472 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A + L I NIAN T G+K A F+ + G G G+ + Sbjct: 6 ALLAGVSGLTANSAALAAISQNIANVNTVGYKRTAAEFSTVVNSQSQGAGYSAGGVLANT 65 Query: 62 TD-----GTTTNTGRGLDVAISQNGFFRLV------DSNGSVFYSRNGQFKLDENRNLVN 110 + G T D+ I+ GFF D+ + ++R G F++D L N Sbjct: 66 RNYIAQGGQLQRTTSSTDLGIAGQGFFVTTEKAEGLDAGDARLFTRAGAFRVDNFGYLKN 125 Query: 111 MQGLQLTGYPATGTPPTIQQGAN---PTNISIPNTLMAAKTTTTASMQINLNSSDPLP-- 165 GL L G+P ++ T+I++ + A+ TT A + NL SS + Sbjct: 126 TAGLYLQGWPVNAEGDIPTDPSDLGKLTSINVGSVGGTAEATTRAQVNANLKSSQAVSAD 185 Query: 166 -----------TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQ 213 + + + + +V V DS+G ++ F+KT + N WQ Sbjct: 186 IATYSTATKSMSTYNATTGTGFKPDFQITVPVSDSKGGQRTVAYSFLKTANPNEWQTEVH 245 Query: 214 --------DSSDPNSIAKTATTLEFNANGTLVDGAMAN--NIATGAINGAEPATFSLSFL 263 + + P++ + + F +G L AM G++ A+P+ S++ Sbjct: 246 VIPASDIDNGTTPSNGILKSGLVLFTQDGRLDVDAMKARETATPGSMLFADPSVASITLG 305 Query: 264 ---------------------------------NSMQQNTGANNIVATTQNGYKPGDLVS 290 + Q + + A NG G+L + Sbjct: 306 ASDAAAGTAAAPKWKTSLGIDNQNVSFDLTASAGGLTQYDSDSIVQAVVTNGTAFGNLSN 365 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 +I+++G V + N T+ + Q+ LA F + + L N + +Q SG L T G G Sbjct: 366 IEIDEEGYVTAIFDNGVTRRIAQVALATFTSADSLTPASGNAYRVSQGSGTFNLKTPGAG 425 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + LEAS VDLS E +I QR Y ++++ I T D++L L++++ Sbjct: 426 GAGLIGASQLEASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAELISIK 477 >UniRef50_B1TBA9 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBA9_9BURK Length = 388 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 109/411 (26%), Positives = 171/411 (41%), Gaps = 39/411 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-------FAGSKVGLGVKV 54 + +SGL A + L IG+N+AN T GFKS F D+ G + G GV Sbjct: 4 SIYIGMSGLAAYSKGLQTIGDNVANLNTPGFKSSAPRFQDLCDGRPTAREGKRSGSGVAY 63 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV-NMQG 113 A T +F G + LD+AI +G L D + ++ Y+R GQF + ++ + G Sbjct: 64 AHATLNFRQGELRGSTGQLDLAIDGDGLLALRDGD-TIRYARTGQFHIADDGFVTERTSG 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L+L ATGT I L T NL S Sbjct: 123 LKLATLDATGTLAPISLA--------QRQLDPPCATRVVRFTDNL--------------S 160 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + V ++D+ G H + V F + + +D + TL+F+ Sbjct: 161 PGSTDFSVSDVEIYDANGAKHVLKVSFAQDTGVMPGRWKVTVADRDGTPLQIGTLQFH-G 219 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG--ANNIVATTQNGYKPGDLVSY 291 G G ++ + T +L F + + + + + Q+GY G L S Sbjct: 220 GIPEPGQDRIDVTL----PSSQLTVTLDFSEGVTAFSAGATSTLRMSKQDGYAAGMLASM 275 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 I+ DG + YSN Q G + LA FA+ + L G ++ A+ +G Sbjct: 276 NIDGDGQLALRYSNGQIGHAGAVALARFADPQRLVRLGAGLFDASHLP-PPRYAKSGDPL 334 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G L +GA+EASNVDLS E +I+ QR +Q+ +Q I T ++++ L +R Sbjct: 335 VGQLRSGAVEASNVDLSGEFGQLILIQRGFQAASQVISTSNEMIMQLFQMR 385 >UniRef50_A9DSB3 Flagellar hook protein FlgE n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSB3_9RHOB Length = 422 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 107/425 (25%), Positives = 186/425 (43%), Gaps = 33/425 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A ++ + I +NIAN+ T G++ + F GS GV Sbjct: 6 ALQIGVSGLQANSSRVQNISSNIANANTVGYRRTFSEFVTQNTGSTQA-GVLTDVRANIS 64 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-----FYSRNGQFKLDENRNLVNMQGLQL 116 T+G T D+A+ +GFF + + + +R G F D+N +L N G L Sbjct: 65 TNGNIVGTNSTTDLAVQGDGFFVVSRNANDPIESNYYLTRAGSFTPDQNGDLRNSAGYFL 124 Query: 117 TGYPATGTPPTIQQGA----NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 +G+P T + + + ++I + + +++ + N+ + + P T + Sbjct: 125 SGFPTDAAGNTGSVSSTSYNDLSTVNIASYQVQGTPSSSVGVSGNVPAQETGPGTTGTA- 183 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSIAKTATTLEFN 231 + ++ + G + +++ + DN W V D + N T + Sbjct: 184 -------FESTLRYVNQLGGSDALTLSWTPGAVDNEWTVSITDEAGTNYGDATVNFTDSG 236 Query: 232 AN---------GTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVA 277 A+ GTL + NG P + F M Q +G A Sbjct: 237 ADAGSPASYTPGTLPIDPATGVVTLSITNGGTPQALEIDFGAPGTFGGMTQFSGDYTPPA 296 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 T +G + G L +++D G + G + N Q + L Q+ LAN AN + + S N + AT+ Sbjct: 297 FTDDGTETGSLERAEMSDSGVLFGVFDNGQRRALFQVPLANVANPDQMRSVDGNAYVATR 356 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG LG G++ + ALE SNVD+++EL ++I QR Y S+A+ I T D++L+ Sbjct: 357 DSGAVSLGNPMLNGLGSINSNALEGSNVDIAQELTDLIQTQRAYSSSAKIITTSDEMLSE 416 Query: 398 LVNLR 402 +N++ Sbjct: 417 TLNIK 421 >UniRef50_C5RFU7 Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFU7_CLOCL Length = 474 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 120/477 (25%), Positives = 198/477 (41%), Gaps = 83/477 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 ++GL A T LDVIGNNIAN T FKS + F D Sbjct: 4 GMYSGITGLKANQTKLDVIGNNIANVGTTAFKSSSIRFTDSLYQNMTSASAPGYNLGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD---SNGSVF-------- 93 S VGLGVKV+ +T + T G NTG LD AI +GFF + G+ F Sbjct: 64 PSVVGLGVKVSAVTTNMTQGNLQNTGSNLDCAIDGDGFFMVATGPLPTGNEFGVTLDTLS 123 Query: 94 ------------YSRNGQFKLDENRNLVNMQGLQLTGYP--------------ATGTPPT 127 Y+R+G F LD + NL++ G ++ GYP A G Sbjct: 124 HSIINGNGMGVNYTRDGSFSLDADGNLLSNSGYRILGYPLQETGLGISSVDYAANGNCNF 183 Query: 128 IQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADSYNKKGSVT 185 + + + +TL+ K ++ N+ D P + + + + K +T Sbjct: 184 VDANSPYGITAATDTLVPMKIPNKVAIAATRNTLDATGAPVGLAMTYTGSSTTTDKPDIT 243 Query: 186 VFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNI 245 + ++ +V D +++ D ++ TT + + D + Sbjct: 244 INNADN-------TYVGDTDVTIKIFFNDKYQDTTVTPPMTTPRYVISINGSDAVAVADA 296 Query: 246 ATGAINGAEPATFSLSFLNSMQQNTGANNIVAT------------TQNGYKPGDLVSYQI 293 T I A+ +T +LS L+ + N + T N + ++ I Sbjct: 297 DTINIKMADGSTKTLSQLDIVLNNAPTDPATPADIQAAAKNSWQFTVNADGEKAIKNFNI 356 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL--------G 345 +G + G + + +LGQ+ ++ F N GL G+N+++ + +SG ++ Sbjct: 357 EKNGVIKGVLQDGRVTVLGQLAMSTFKNTVGLQKLGNNLYNVSANSGEPIIRSSVGTEKD 416 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + FG+ NG +E SNVDL+++ MIVA R +Q+N++ I T D+IL LV L+ Sbjct: 417 RSNEDAFGSCVNGVVEMSNVDLAEQFTEMIVASRAFQANSKIITTSDEILQELVQLK 473 >UniRef50_D1TF51 Flagellar hook protein (Fragment) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF51_9BURK Length = 378 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 134/377 (35%), Positives = 197/377 (52%), Gaps = 22/377 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M++ +SGL+AA+ +LDVIGNNIAN+ T GFK GTA F+DM+A + ++G+GV Sbjct: 1 MSYQTGLSGLHAASNDLDVIGNNIANAHTVGFKQGTAVFSDMYANAMLGATNNQIGIGVA 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM-Q 112 + I +DF++GT T TG LD+ I NGFF L NG+ YSRNGQF+ D + N+++ Sbjct: 61 TSAIVRDFSEGTPTQTGNPLDLDIRGNGFFLLSQ-NGTPVYSRNGQFQQDSDGNIISSGN 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GL L GY A G + + + T+ + NLN+ D P VTPF Sbjct: 120 GLPLMGY-AEGPNGVVDTSRLVQLTTATVANLPPMPTSAIAWSFNLNAGDDTPKVTPFDP 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--DNNW---------QVYTQDSSDPNSI 221 +N SYN + T +DS+GN H +S+Y VK N W V + + S Sbjct: 179 TNNQSYNFATTATTYDSEGNQHQISIYLVKDPATPNQWSAYIAPQGSDVTVDNGTGAPSS 238 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 TL F+++G L + + + A P T ++ N+ Q +++ + Sbjct: 239 YTQIGTLTFDSSGRLTSSSSLSFEMSMTNGSASPQTIAIDLGNTTQYAATTDSVTRYHPD 298 Query: 282 GYKPGDLVS-YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 GY + DDGT+ Y+N +T ++GQ+ A FAN GL S+ N++ ATQ+SG Sbjct: 299 GYAAAAYNGTLSVADDGTITAGYTNGETLVIGQVATATFANPNGLESQSGNLFYATQASG 358 Query: 341 VALLGTAGTGNFGTLTN 357 A +GT GT N G L Sbjct: 359 SAQIGTPGTFNHGALQG 375 >UniRef50_A3UFN4 Flagellar hook protein n=2 Tax=Hyphomonadaceae RepID=A3UFN4_9RHOB Length = 465 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 108/459 (23%), Positives = 187/459 (40%), Gaps = 58/459 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG------LGVKVA 55 A + SGL A ++ L I +NIAN T G+K F + G GV Sbjct: 6 AMAAGASGLIANSSALAAISDNIANVNTVGYKRVDTIFTPNYKIGGGGETRYASSGVSSN 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLV------DSNGSVFYSRNGQFKLDENRNLV 109 + G T D+AI +GFF + S+ +V ++R+G F+ D + L Sbjct: 66 SRLDVNSSGLLTPGVSATDMAIDGDGFFVVRPSPTAGGSSDAVLFTRSGGFQTDSSGYLR 125 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTN---ISIPNTLMAAKTTTTASMQINLNSSDPLPT 166 N G+ L +P Q +N +++ N A T++ + NL +S Sbjct: 126 NDAGMYLYAWPVQADGTVNQNPSNVDTLEAVNLSNIGGTANATSSVRINANLQASTTPSA 185 Query: 167 VTPFSASNADSYNK---------KGSVTVFDSQGNAHDMSVYFVKTGDN--NWQV--YTQ 213 A N + ++ ++D+QG +++ F+K N W V + Q Sbjct: 186 AAATYDPTASGTNMASGTVTPDFERTIQIYDTQGGVRSVTMSFLKHATNANQWHVELHVQ 245 Query: 214 DSSDPNSIAK------TATTLEFNANGTLVDGAMANNIATGAINGAE------------- 254 +SD + A + F+ NG +V GA + ++ Sbjct: 246 PASDVTTGAPLIDGQIATGIVAFDTNGEIVPGAPTTLPTSLPFEASDAAGAVGAGAVRWA 305 Query: 255 ------PATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 T SL + Q +N+ +T +G G +++DDG + + Sbjct: 306 ASTGVGAQTISLDLGTAGTPGGITQFNSPSNLDSTVVDGAIFGAFAGVEVSDDGFLSARF 365 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 +N + + Q+ +A N GLAS G + T+ SG L G+G GT+ +E S Sbjct: 366 TNGVVRRVYQLPVATVFNPNGLASVGGASFQITEDSGAFTLNAPGSGASGTIAAKTVENS 425 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NVD++ E N+I+ QR Y ++++ I T D++L + ++ Sbjct: 426 NVDIATEFSNLIITQRAYSASSRIITTADEMLAEAIQMK 464 >UniRef50_Q6LW64 Hypothetical flagellar hook protein FlgE n=1 Tax=Photobacterium profundum RepID=Q6LW64_PHOPR Length = 472 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 135/472 (28%), Positives = 197/472 (41%), Gaps = 74/472 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG---LGVKVAGI 57 M+ + +SGL A + ++ I +NIAN T G+KS F D++A G GV+VA I Sbjct: 1 MSMNIGMSGLIATSEQMNSISHNIANVGTAGYKSSRTEFQDIYAPEFGGGEMNGVEVAAI 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL--------- 108 Q F +GTTT TGR D+AI+ GFF + + G ++RNG F LD++ NL Sbjct: 61 RQSFKNGTTTPTGRNGDLAINGEGFFMVENK-GQQMFTRNGVFNLDKDGNLVASDGSHLQ 119 Query: 109 ---VNMQGLQLTGYPATGTPPTIQQGA-------NPTNISIPNTLMAAKTT--------- 149 V G TG T T A N+ + + KT Sbjct: 120 GYGVTGTGQIQTGTITDLTVETGDMPARSSTKVNMEVNLDANSLAIVPKTPFDPEDPSTF 179 Query: 150 ---TTASMQINLNSSDPLPTVTPFSASNADSYNK---------KGSVTVFDSQGNAHDMS 197 T ++ +L + + +A NA + K + FDS+G + Sbjct: 180 TSSATTTVYDSLGAEHEVTQYYVKTADNAWDVHYLIDDEKTATKTASMAFDSEGKLSAIY 239 Query: 198 --------VYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANG--------------- 234 Y + V +D A + +A Sbjct: 240 DPANPVVATYLNASTKAREAVAASTVADAALAANPTDKVLIDAAATAKVAAKTATDAAAL 299 Query: 235 ------TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 + +A ++A NG+ T Q I +Q+G+ PG + Sbjct: 300 AKVSADPIAAATVAVDLAFTPNNGSANQTIKFDVAE-TTQFGKEFAITKNSQDGHAPGQV 358 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 + DG V YSN QT++ GQ+ LA F N EGL G+ W+ + SSG AL+G AG Sbjct: 359 AGWYFEGDGRVFARYSNGQTKVQGQVSLARFPNQEGLQQAGNTRWTQSFSSGAALVGAAG 418 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 TG G + G E SNVDLS E+VN++ AQ NYQ+NA+TIK ++ L Sbjct: 419 TGQLGNVRTGMYENSNVDLSSEMVNLMSAQSNYQANAKTIKVAQEMTQILFQ 470 >UniRef50_Q07TK1 Flagellar basal body FlaE domain protein n=8 Tax=Bradyrhizobiaceae RepID=Q07TK1_RHOP5 Length = 421 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 120/425 (28%), Positives = 197/425 (46%), Gaps = 38/425 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-----GVKVAG 56 A S A+S LN+ + +L +I +NIANS T G+K+ +A F + S GV V Sbjct: 6 ALSSAISALNSQSQSLAMISDNIANSQTVGYKTTSALFDSLVTSSSSASSYSSGGVTVLS 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNMQGL 114 + + G T T D+ IS NGFF + + GS Y+R G F +D++ +VN G Sbjct: 66 KSNISSQGLLTTTTSSTDIGISGNGFFPVSTALNGGSTLYTRAGSFTIDDSGYMVNASGA 125 Query: 115 QLTGY--PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 L G+ A G + I + TT ++ +NL + + Sbjct: 126 YLLGWRTDADGNVVGGTGSGDLVPIDTNIAATSGSATTETTVALNLPADAAV-------- 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ------VYTQDSSDPNSIAKTAT 226 + S+ ++DS G A+ M + + KT DN W T DS+ A Sbjct: 178 ----NDTFTSSMPLYDSLGTANSMQITWEKTADNTWTASVANPTLTSDSTKTTGTASGTI 233 Query: 227 TLEFNANGTLVDGAMANNIA-TGAINGAEPATFSLSF-----LNSMQQNTGANN-----I 275 T+ FN++G+L + + +G GA +T +L ++ + Q + + + Sbjct: 234 TITFNSDGSLKSTSSPTAFSVSGWTTGAANSTITLDLGTIGGIDGLTQKSSGSTTPAIDL 293 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + +G G L S + DDG V YSN T L +I +A FA + L + + +++A Sbjct: 294 TSIESDGSAYGKLSSVAVGDDGKVNATYSNGTTISLYKIPVATFAAPDQLQVKSNGLYAA 353 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG A++ +G+ GT+ G LEAS D + E NMI AQ+ Y + +Q I +++ Sbjct: 354 TADSGTAIVQQSGSNGAGTIQGGKLEASTADTNTEFSNMISAQQAYSAASQVITAVNEMF 413 Query: 396 NTLVN 400 +TL++ Sbjct: 414 DTLIS 418 >UniRef50_C6C0P3 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0P3_DESAD Length = 528 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 127/524 (24%), Positives = 198/524 (37%), Gaps = 124/524 (23%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A +G+ + L IG N+AN T +KSG + + S Sbjct: 5 SMYTAATGVKSHGVLLQQIGANLANVNTTAYKSGDTFLETLASQSSGKANSGIVSGGIST 64 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLD 103 ++GLG +VA +F +G+ T D+AI GFFR+ D + + Y+R G F D Sbjct: 65 PGQIGLGTRVATTRINFKEGSFETTNSSTDIAIGGQGFFRVADPVSNASRYTRAGSFHFD 124 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPT----------NISIPNTLMAAKTTTTAS 153 +N LV+ L GY N I K T + + Sbjct: 125 KNGQLVDSHKNILQGYKIDDDGNIGSTSQNIVLPMKEETDTYGNKIMVVKSDPKGTDSVT 184 Query: 154 MQINLNSSDPLP---------------TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV 198 M+ NL+S T + AD Y S+ ++D GN HD+ V Sbjct: 185 MRTNLDSGAVDNSSSEDSPFFSLLQEWDGTKDTPLTADKYEYNSSIQIYDDNGNKHDLVV 244 Query: 199 YFVK-------TGDNNWQVYTQDSSDPNSIAKTAT---------TLEFNANGTLVDGAMA 242 YF K + +W+ ++ A T T TL F+ +G L++ + Sbjct: 245 YFDKVINDGDSSDKRHWEYIVTVPPGEDASALTGTSGAGLVMAGTLTFSGDGALLNQSAF 304 Query: 243 NNIA----------------------------TGAINGAEPATFSLSF------------ 262 A +GA A T SL Sbjct: 305 TLAAGSADGKDLANWEQATLNSNGQPTFSVTLSGASGTASAQTISLDMGITSGTDSWNTT 364 Query: 263 ------------------------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 L + ++ I + +Q+G+ G L + + DG Sbjct: 365 GVTAADIGSNASSLPGMVDGKLNALATTDYYGSSSTI-SQSQDGFGEGYLQNVSFSPDGI 423 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 + +SN + L Q+ L NF N GL EG N +SAT SG A+ G A G++ + Sbjct: 424 MSALFSNGMSAELYQVNLYNFKNEFGLRREGSNYFSATIDSGEAIQGVARKDGLGSVVSN 483 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +LE SNVDL+ E MI+ QR +Q+N++ I T D ++NT + ++ Sbjct: 484 SLETSNVDLADEFAYMILTQRGFQANSKGITTTDSMINTALGIK 527 >UniRef50_O67711 Flagellar hook protein flgE n=2 Tax=Aquificaceae RepID=FLGE_AQUAE Length = 482 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 111/481 (23%), Positives = 191/481 (39%), Gaps = 107/481 (22%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----------- 50 +F A++G++ + LDV +N+AN+ T GFK F DM + VGL Sbjct: 4 SFYNAITGMDVSRFALDVTSDNLANANTVGFKKSRPIFQDMVSQVVVGLNTTTGTVKTTT 63 Query: 51 ---GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENR 106 G V + +T G+ T D+AI F L D +Y+R+G+F+++ Sbjct: 64 FGAGAVVDSTQKVWTIGSFKQTEITTDLAIEGKALFILRDVLTNQTYYTRDGRFRINREG 123 Query: 107 NLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQ--INLNSSDPL 164 L+N GL + G+ + G +I + + K T NL+ P+ Sbjct: 124 YLINPNGLYVQGFKVNPVTGEV-TGTQLEDIRVETQI-PPKATGEIYFNPPTNLDERAPI 181 Query: 165 --PTVTPFSASNADSYNKKGSVTVFDSQG------------NAHDMSVYFVKTGDNNW-- 208 T TPF+ ++ +YN + ++T++DS G + VYF+ + + Sbjct: 182 IDQTTTPFNPLDSFTYNYRYTLTIYDSLGREVPADIYFVKTGTNQWKVYFLASLKERYIN 241 Query: 209 --------------------QVYTQDSSDPNSIAKTAT-TLEFNANGTLVDGAMANNIAT 247 QV+ D+ +++ A+ TLEF+ + + +I Sbjct: 242 VDWNGDDDKTDIVFLDLFNDQVHIADNGTFSTLPTFASKTLEFDPSTGKLVYIPGGDIVQ 301 Query: 248 GAINGAEPATFSLS---------------------------------------------F 262 N L+ Sbjct: 302 DTANQKFYLEVDLTPESGPSEINDPNDTESYLNKLGAKLGSETNKIKIYVGEGILQNNVI 361 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQI-NDDGTVVGNYSNEQTQLLGQIVLANFAN 321 NS A+ +V Q+GY G+L+ + ++DG VVG YSN +T ++ LA F + Sbjct: 362 QNSYITQHAADFVVTMDQDGYARGELIDLYVLSEDGVVVGVYSNGETLPTYRLALAQFTD 421 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 E L +G N++++ + + G N + + +E SNVD++KE +N+I AQR Y Sbjct: 422 PEELVKKGSNLYASVK---TPTILLPGGSN--KIRSAVVEMSNVDIAKEFINLITAQRTY 476 Query: 382 Q 382 Q Sbjct: 477 Q 477 >UniRef50_A4U4J9 Flagellar hook protein FlgE n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4J9_9PROT Length = 430 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 108/435 (24%), Positives = 193/435 (44%), Gaps = 51/435 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-----GVKVAG 56 A + AV+ L A +T L +I +N++NS+T G+K+ T SF + S GV + Sbjct: 6 AMNSAVTALKAQSTALSIISDNLSNSSTTGYKANTTSFKTLVTQSYSSTSYASGGVTASV 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLV--DSNGSVFYSRNGQFKLDENRNLVNMQGL 114 G + T D+A+ +GFF + + F++R+G+F++D + Sbjct: 66 RQNVAAQGVISGTSNSTDLALDGDGFFVVSYGATGEETFFTRDGEFEIDSAGFMCLGN-Y 124 Query: 115 QLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 L G+ + I + + +++ A+ T+ ++Q NL + V Sbjct: 125 YLQGWETDSSGNVIAGSTNSSSTLSAVNVNRFTGTAEATSAETIQANLPADAATGDVV-- 182 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS-------SDPNSIAK 223 ++ VFD+ G +H +++ + KT N W++ D +D I Sbjct: 183 ----------TATMEVFDALGVSHTVTMSYEKTAANEWELSLSDPVLSSDTATDSGDITG 232 Query: 224 TATTLEFNANGTLVDGAMANNIAT--------GAINGAEPATFSLSF------LNSMQQN 269 TL F A+G L A +AT + ++ AT ++ S+ Q Sbjct: 233 GPFTLTF-ADGALTSITDAGGVATELEFSITGFSTGASDIATIAIDVGQGTSGTGSLTQF 291 Query: 270 TGAN-----NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 + + +I + T +G + G L S +++ G + ++ N Q + ++ +A+F N G Sbjct: 292 SSNSDDPDISITSITGDGVEYGALSSVEVDKKGVIWAHFDNGQDIAIYKLAVADFTNANG 351 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L ++G V+ T +SG L AG T+T ALE+S VD S E MIVAQ+ Y + Sbjct: 352 LENQGYGVYQQTSASGDFTLHEAGEDGVATITPSALESSTVDTSDEFTRMIVAQQAYSAA 411 Query: 385 AQTIKTQDQILNTLV 399 +Q I T + + L+ Sbjct: 412 SQVISTASDMFDDLM 426 >UniRef50_A3SFR5 Putative flagellar hook protein n=2 Tax=Sulfitobacter RepID=A3SFR5_9RHOB Length = 433 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 114/439 (25%), Positives = 175/439 (39%), Gaps = 50/439 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A + + I NIANS T G++ G A A G GV ++ Sbjct: 6 ALQTGVSGLRANSKAVGSISENIANSNTVGYRRGFAHMVTTTASGGNGDGVLSVNAVEEL 65 Query: 62 ---TDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-----FYSRNGQFKLDENRNLVNMQG 113 T G +T D+AI NGFF + + +R G F DE NL N G Sbjct: 66 DIATAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLKNAAG 125 Query: 114 LQLTGYP----ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 L GYP + ++I N ++A T+T + NL S D Sbjct: 126 YYLAGYPYGLEGDIGSVDRTSFKDMETVNIGNLNISAGVTSTITAFGNLPSQDTGQADPG 185 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPNSIAKTATTL 228 S VF + G + +S + T N W + +D N + T+ Sbjct: 186 AP--------FVTSSEVFTALGESQRVSFSWAPGTTANTWDLAI---ADQNGNGLGSVTI 234 Query: 229 EFNANGTL---------VDGAMANNIATGAINGAEPATFSLSFL---------------- 263 EFN G ++ A AT +L Sbjct: 235 EFNNAGPAAGSPLSYSNINSTATAPAAFTVDPATGVATITLDNGVVPQEIDITLGKPGAF 294 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 + + Q G ++ A ++G G+LV +I +DGT+ G + N + L I +A AN Sbjct: 295 DGISQFAGDFSL-AFDRDGSSAGELVRTEITEDGTLFGVFDNGMRRALYDIPVAVVANPN 353 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL N + + +G A + G++ GALE SNVD+++E+ ++I AQR + + Sbjct: 354 GLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKAQRAFST 413 Query: 384 NAQTIKTQDQILNTLVNLR 402 NA+ I T D +++ L+ Sbjct: 414 NAKVITTVDDMMDETTRLK 432 >UniRef50_B7ATR6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATR6_9BACE Length = 420 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 114/421 (27%), Positives = 191/421 (45%), Gaps = 37/421 (8%) Query: 17 LDVIGNNIANSATYGFKSGTASFADMFAGS-------------------KVGLGVKVAGI 57 +DVIGNNIAN T FKS + SF+++F + ++GLG V I Sbjct: 1 MDVIGNNIANVNTIAFKSSSVSFSEVFYQTTQVASGPNATTGKGGQNAKQIGLGTSVGSI 60 Query: 58 TQ-DFTDGTTTNTGRGLDVAISQNG--FFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 + T+G + T DV +S +G FF + SNG+ +++R G F D + LV G Sbjct: 61 STKVDTEGASQRTDNPFDVKLSGSGNSFFIVR-SNGNTYFTRAGDFTYDASGALVTQSGA 119 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNSSD-PLPTVTPFSA 172 + G+ ++ P + + TT + N+NSS + S Sbjct: 120 NVMGWVTNDQGEIVKDVVQPLYVKSDEFTYTMPEQTTNLKVSGNINSSSGNFAKGSGTSG 179 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV----YTQDSSDPNSIAKTATTL 228 ++ D + +++ +D+ G + ++ + N+ T++ + + Sbjct: 180 ADGDQKGETMTLSFYDNLGYRYQATIAVTQVDKYNYHTEVTGVTKEGKAADLTVTFDHDI 239 Query: 229 EFNANGTLVDGAMA---NNIATGAINGA---EPATFSLSFLNSMQQNTGANNIVATTQNG 282 FN L+DG + I GA + + +S L S+ T I + G Sbjct: 240 SFNPTTGLLDGTDSSLDFTITGGADADSFVKDTIAVDISNLKSIGDETKFEYIDVAGK-G 298 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G + S I DDG ++ +YSN T ++GQI +F N GL G N+++AT +SG Sbjct: 299 KAVGKMSSVGIQDDGRIIASYSNGDTVVIGQIATQSFTNAAGLEKVGTNMYAATLNSGEF 358 Query: 343 L-LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G T G++ +G +E SNVDL+ E +MI QR +Q+N++ I D +L L+NL Sbjct: 359 DGVGEDITSAGGSMVSGTIEMSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELINL 418 Query: 402 R 402 + Sbjct: 419 K 419 >UniRef50_A4WW59 Putative uncharacterized protein n=4 Tax=Rhodobacter sphaeroides RepID=A4WW59_RHOS5 Length = 474 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 116/468 (24%), Positives = 187/468 (39%), Gaps = 67/468 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGSKVGLGVKVA 55 + + V+GL A AT L I +NIANS TYG+K A F M +G+ GV+ Sbjct: 6 SLNAGVAGLYANATKLASIADNIANSGTYGYKRADADFESMVITQSANSGTYSAGGVRAN 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLV--------DSNGSVFYSRNGQFKLDENRN 107 + G +T +D+AIS G +V N ++ +R G FK D N Sbjct: 66 TLRLVEERGAIVSTSNAMDIAISGRGMLPVVRETSLGSTTGNDALLMTRTGSFKTDPNGV 125 Query: 108 LVNMQGLQLTGYPATGTP----PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS--- 160 L GL L G+PA + + + I AA TT ++ +NL + Sbjct: 126 LKTDTGLVLLGWPANADGTVPTMSRDSISQLQPVVIAANQTAADPTTRMNLGVNLPAERT 185 Query: 161 -----------------------SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMS 197 + + ADS K ++ + DS + ++ Sbjct: 186 KLGASASPLTVAVEYFGNLGTSETLQVSYYPTIPTVAADSPTNKWTMVIQDSASSDRTIA 245 Query: 198 VYFVKTGDNNWQVYT-----------QDSSDPNSIAKTATTLEFNAN----GTLVDGAMA 242 +Y ++ D T + P S + F+ + GT Sbjct: 246 IYELQFSDARSGGGTLLDLSGATPAGSPAVKPLSTFSPVAGVSFDVDPYGAGTPTASPAY 305 Query: 243 NNIA---TGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 N+ T A+ G+ T L+ +++ Q +G T+NG G+L +I+ Sbjct: 306 NSATGQVTLAVGGSAANTLDLTLGRPGSASALTQVSGDFAQTGITKNGSPVGNLTGVEID 365 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 G + Y T+++ QI L + N GL + + ++ + SG L AG G G Sbjct: 366 AGGLIKATYDTGFTRVIYQIPLVDVPNYNGLTALNNQTFAISPDSGSFYLWDAGDGPTGD 425 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + A E S D+++EL N+I QR Y SNA+ I+T D++L NL+ Sbjct: 426 VVGYAREGSTTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLK 473 >UniRef50_B9R0M9 Conserved domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0M9_9RHOB Length = 477 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 117/476 (24%), Positives = 199/476 (41%), Gaps = 82/476 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGIT--- 58 A + AVSGL+A AT L+ I N+ANS T GFK +F+D+ +G +V+G T Sbjct: 6 AINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTFSDLVSGGGSTQADQVSGTTYAT 65 Query: 59 ---QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------SVFYSRNGQFKLDEN 105 + G ++ +AI+ G+F + + FY+R G F++++ Sbjct: 66 SRATNTIGGDISSNDVDTYMAINGEGYFVVTQAADFVDGSTTFADDTFYTRAGDFEVNKE 125 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 VN G L G+P G NP+ I I + +AA +TTT + Q +L Sbjct: 126 GYFVNQSGYYLKGFPLDPATGN-PVGDNPSVIQINSQPLAASSTTTVNYQASLPRVPATT 184 Query: 166 TVTPFSAS---------------------------NADSYNKKGS---VTVFDSQGNAHD 195 P +A+ AD S VT ++S G+ Sbjct: 185 NYDPNTANSELLNDGANGAPGPNLGATEIGDTGTLEADFLASSISGGSVTAYNSNGSEVP 244 Query: 196 MSVYFVKTGDNN----WQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAIN 251 ++V + K + W +Y + + + F+ G + A A + Sbjct: 245 LNVRWAKVDNTAGAEVWSMYVDTGGEAGTSYYKVGDVTFDGTGQVSALANTGATAALGVT 304 Query: 252 GAEPATFSLSFL-----------------------NSMQQNTGANNI---VATTQNGYKP 285 + +F+L + S+ Q + I V +QNGY Sbjct: 305 TSGTTSFTLDEITVGGVTAGTAGNAADSITISFANGSLTQFADPDGIATSVNLSQNGYAA 364 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 G+L + I++ G V+ +YSN QT+ L +I LA F + L ++AT SG A L Sbjct: 365 GELTNIAIDESGRVIASYSNNQTRALYEIPLATFQAEQSLRRVDGAAFAATSDSGDADL- 423 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G + + ALE SN D++ E +I+ Q+ Y +N++ + + D++L++ +N+ Sbjct: 424 ----SGGGAVISNALELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDSALNM 475 >UniRef50_D1U447 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U447_9DELT Length = 535 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 117/530 (22%), Positives = 196/530 (36%), Gaps = 129/530 (24%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +G+ A + V+ NN+AN +T GFK A F D+ + Sbjct: 5 SLYVGATGVVAHGERMQVVANNLANVSTIGFKKADALFGDLMSSQLGYGGGQFESGSSYA 64 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-----GSVFYSRNGQF 100 S++G GV ++ I F +G NT D+AI+ NGFF + D+ G+ Y+R G F Sbjct: 65 SQMGQGVSMSAIRTVFAEGGLENTTTTTDLAITGNGFFGVRDTTAGGTMGASHYTRAGSF 124 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL----------MAAKTTT 150 + + + LV+ +L GY + + + + + + TT Sbjct: 125 RFNNDAYLVDPHDFRLQGYAVDRETGVVATQVSDVQLPYEDVVIDGQPVRLVRSQPRATT 184 Query: 151 TASMQINLNSSDPLPTVTPFSASNA----------------DSYNKKGSVTVFDSQGNAH 194 M NL++ + + A + ++T++D+ GN H Sbjct: 185 DVEMVTNLDAVATEQYSSATNPFFAMLEAYNGSSGSKPFGENLPAYSSALTIYDADGNEH 244 Query: 195 DMSVYF----------VKTGDNNWQVYTQDSSDPNSIA---------KTATTLEFNANGT 235 +M+VYF G + W+ + L FN +G Sbjct: 245 EMTVYFDPVNASSLSNAAPGYSYWEYLVALPGSSDGSGAYGTSAAGLAGMGVLTFNGSGQ 304 Query: 236 LV---DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN----------- 281 LV ++ ++ PATF+L + G+N T+ Sbjct: 305 LVGQSAYSLTGGADGKNLSNWAPATFNLDGEPQVSFTFGSNGAAIGTEQLVSYDFGLTST 364 Query: 282 ------GYKPGDLVSYQIND---------DGTVVGNY----------------------- 303 G V + + D + +Y Sbjct: 365 TSTWLSGAATAAGVGLNVGNLVQMANEARDARITTSYDQSSFTAYQIQDGFTWGYLLNTS 424 Query: 304 -----------SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 SN QT+ Q+ FA+ GL +G N + AT +SG A+ G A G Sbjct: 425 VDGDGFLSGYFSNGQTEEFYQVANYRFASEWGLRRDGGNNFVATDASGAAMDGKALVGGR 484 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G+ LE SNVD+++E +MI+ QR YQ+N + I T D +LNTL++++ Sbjct: 485 GSFVQNTLEMSNVDMAEEFASMIITQRGYQANTKVITTSDSLLNTLISVK 534 >UniRef50_Q12T69 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T69_SHEDO Length = 392 Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 111/406 (27%), Positives = 180/406 (44%), Gaps = 33/406 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-KVGLGVKVAGITQD 60 AF +SGLN+ + NLD + NNIAN T G++ + + + S K GLG +++G+ Sbjct: 4 AFYTGLSGLNSYSKNLDNVSNNIANMNTAGYRGMDSFYQALGGDSDKPGLGAQISGLGYR 63 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ-GLQLTGY 119 F+ G TG D+AI+ GFF L+D VFY+R GQF+ D+N LV+ G ++ G Sbjct: 64 FSVGDIRQTGNDFDLAITGTGFFALLDGE-KVFYTRTGQFEFDQNNVLVDKNTGFKVAGI 122 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 + G I + + TT S+ NL+ D + ++ Sbjct: 123 DSNGQLSEINL--------LSYQAIKPTATTKLSLTGNLSPLDDVHQIS----------- 163 Query: 180 KKGSVTVFDSQGNAHDMSVYFVK---TGDNNWQVYTQDSSD----PNSIAKTATTLEFNA 232 S + +S G D+S+ F T N W+V D +S+ Sbjct: 164 ---SAKMINSLGEEVDLSIKFTNEKATFPNQWKVEILDDKGIVLHSDSVKFGPDGTPEVG 220 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 +G+ + ++ T I+ S + +N+ +G G LV Sbjct: 221 SGSFIFNLADSSGNTTPIDITVGTIGDFSAVTQTSATGVDSNVTLHAVDGKGVGQLVKRS 280 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 + G V NYSN I + +F + L+ E V+ A+ +LG AG G F Sbjct: 281 FDPQGRVTLNYSNGDKVTPFTIAMVDFDDISTLSIESGTVFKASDLE-SRVLGKAGEGRF 339 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 L ++E SNVDLS+E +M+V QR YQ++++ + +Q++ L Sbjct: 340 KQLATSSIEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQL 385 >UniRef50_Q2RRL4 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRL4_RHORT Length = 442 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 111/438 (25%), Positives = 178/438 (40%), Gaps = 39/438 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL---GVKVAGIT 58 AF+ + + + L I N+AN T G+K +F + + S GVK Sbjct: 6 AFTNSSMAMITQSHALGQISTNVANINTTGYKQVDTNFKTLLSESTANFDFFGVKPVDYR 65 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFK-----------LDE 104 + G TGR LDVAI G F + D +G FY+R+G F + Sbjct: 66 RVSEQGGLLTTGRNLDVAIGGQGLFMVNQQADLSGETFYTRDGSFGARVAKETVGKVVAG 125 Query: 105 NRNLVNMQGLQLTGYPATG---------------TPPTIQQGANPTNISIPNTLMA-AKT 148 N L G + G+ A TI + I + A + Sbjct: 126 NSYLSTQDGYYVMGWAADQAAVQAGTEPFPVNDTKTGTITGARALSPIQLNTRAEADGQA 185 Query: 149 TTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--DN 206 TT A ++ N+N+ + T S ++S+ F N Sbjct: 186 TTAAVVRANINALATTTQSLGIPVWGPEVTTTAADGTT-SSTWPRQNVSLEFTPVAGTQN 244 Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 +W V D + + T + FN +GTL+ T ++ ++++ Sbjct: 245 SWTVAVSDPNGGTTGTATPAQVTFNGDGTLLSPDDGQLAVAVTYANGTTGTIAVD-IDAL 303 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q +GA I NGYK G L+S I+ G + G YSN QT L ++ L +F N+ L Sbjct: 304 TQVSGATQIRNLDTNGYKEGSLISTNIDASGVLSGTYSNGQTLPLYKLALTDFQANDHLE 363 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNF--GTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 + G N++ A+ ++G + + +A + T+T+GALE S VDL + MI Q Y S+ Sbjct: 364 AIGKNLYRASDAAGESRIFSADSAASVGTTVTSGALEQSTVDLGDQFSKMITTQTAYSSS 423 Query: 385 AQTIKTQDQILNTLVNLR 402 A +T D++ T+ L+ Sbjct: 424 ATVFRTCDEMSQTVSGLK 441 >UniRef50_B6BH25 Conserved domain protein n=2 Tax=Campylobacterales RepID=B6BH25_9PROT Length = 419 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 95/429 (22%), Positives = 167/429 (38%), Gaps = 45/429 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------------AGSKVG 49 AF +SGL + +++I +N+AN +T GF+ FA MF S +G Sbjct: 5 AFYTGISGLKSNQGGINIITDNLANISTVGFRGYNTEFASMFEDNLNTTSKNSATSSTIG 64 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 GVK+ T + G + + D+AI NG+F + Y+R G F D + +L+ Sbjct: 65 AGVKLQAATMNRDQGVIQISDKSTDLAIVGNGWFGIQGEK-DTMYTRGGNFTFDRDSDLI 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGA----------NPTNISIPNTLMAAK-TTTTASMQINL 158 G + G + G + + P TL +TTA N+ Sbjct: 124 TQDGFYVLGTMGANIQDDVLTGILDEVKLGDVKSQEKLRFPQTLTYPSVASTTAKFLGNI 183 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 + D + V D N + + + F K D + Sbjct: 184 GTDDEA---------------RTIGAGVIDGLNNRNHLRLSFTKVVPQVLPGSQWDVTAT 228 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI--- 275 T + G D A T + ++ + +NI Sbjct: 229 TQTLDGTTIYDTQTGGASFDSRGALISTTLTSIDNNGSPVAIDLGSGFDGVVAISNIPIS 288 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 ++ +G + GDL Y +N + V+ ++N +G+I + +F N +GL + Sbjct: 289 ASSLADGTQGGDLEGYSVNKNAEVIATFTNGLQSSVGKIAVYHFRNEQGLDRASGARFFE 348 Query: 336 TQSSGVALL--GTAGTGNFGT-LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 ++SG L ++G GT + N LE SNV ++ L ++I+ QR Y +N+++I T D Sbjct: 349 GKNSGSPLFYQDSSGENIIGTDILNFHLEGSNVQMTTGLTDLIIFQRAYDANSKSITTAD 408 Query: 393 QILNTLVNL 401 Q++ + + Sbjct: 409 QMMQKALQM 417 >UniRef50_A5FUQ6 Flagellar basal body FlaE domain protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUQ6_ACICJ Length = 425 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 113/433 (26%), Positives = 183/433 (42%), Gaps = 48/433 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GVKVAGI 57 A +VSGL A ++ I +NIANS T G+K F + S V Sbjct: 6 ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQSTASNNGPDSVVANPE 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--------------NGSVFYSRNGQFKLD 103 + +GT T + L +AI+ NG+F + + +Y+R G F L+ Sbjct: 66 YTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFTLN 125 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 + LVN G L G+ T T+ ++ I + T+ ++ L ++ Sbjct: 126 SSGYLVNGAGAYLDGWSVNPTTGTVNT-SSLAPIQVSQGASPPVPTSNVTLSATLPTTPS 184 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPNSIA 222 VT V V+DS GN +++ + TG N S + Sbjct: 185 STPVTT-------------QVDVYDSLGNMQPLNLSWSPVTGSANTWTLNVSSPNATPST 231 Query: 223 KTATTLEFNANGTLVDGAMANN----------IATGAINGAEPATFSLSFLNSM---QQN 269 + T+ FN NGTL I+ A+P T S Q Sbjct: 232 VGSATMAFNTNGTLSSITAGTGTTSPAAGQLQISPSYNGSAQPITLDFGAPGSTAGLTQY 291 Query: 270 TGAN-NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 G + N+ +QNG G + I+ G + NY+N ++ + QI LA+FA+ + L ++ Sbjct: 292 AGTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANYTNGFSKQIAQIPLASFASPDALQNK 351 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 + +ATQ+SG A + G G+ G L G++E SNVD++ + ++I AQ+ Y +N + + Sbjct: 352 SGQIETATQASGAATINAVG-GSGGALVTGSVENSNVDIATQFTDLINAQQAYTANTKVV 410 Query: 389 KTQDQILNTLVNL 401 QIL T VN+ Sbjct: 411 TAAQQILTTTVNM 423 >UniRef50_D2M8A9 Flagellar basal body FlaE domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8A9_RHOPA Length = 422 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 122/424 (28%), Positives = 205/424 (48%), Gaps = 35/424 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGSKVGLGVKVAG 56 A S A+S LNA + +L +I +NIANS T G+K+ +ASF+ + A + GV V Sbjct: 6 ALSSAISALNAQSQSLAMISDNIANSQTVGYKTTSASFSQLVTAASGASTYSSGGVTVLA 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFF--RLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 + T G T T D+ IS NGFF + G+ Y+R G F LD + LVN G Sbjct: 66 RSNITTQGLLTTTTSSTDIGISGNGFFPVTTAVTGGTTLYTRGGSFTLDNSGYLVNASGA 125 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L G+ + T + I ++ A + T + + N A Sbjct: 126 YLLGWRTDADGNVAGGASADTMVPIDTSVAATSGSATTTTTVAAN----------LPADA 175 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT------L 228 A + S++++DS G A+ M + + KT +N+W + + ++ A T + Sbjct: 176 AVNDTFTTSMSLYDSLGTANSMQITWTKTAENSWTATFANPTLASNTATATGTVSGSIAI 235 Query: 229 EFNANGTL--VDGAMANNIATGAINGAEPATFSLSFLNS------MQQNTGANN----IV 276 FN++G+L + + A TG NGA + ++ + Q ++GA + Sbjct: 236 SFNSDGSLASTNPSPATISVTGWTNGAADSVITMDLGTAGGTDGLTQYSSGATTPAVDLT 295 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 + +G G L S I DDGTV YSN +T + ++ +A FA + L ++ + +++AT Sbjct: 296 SIESDGMAYGKLSSIAIGDDGTVSATYSNGKTTTIYKVPVATFAAADQLEAKDNGMYAAT 355 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG A++ +GT G++ G LEAS D + E +MI AQ+ Y + +Q I +++ + Sbjct: 356 LASGTAVVQLSGTNGAGSIEGGVLEASTSDTNTEFSSMISAQQAYSAASQVISAVNEMYD 415 Query: 397 TLVN 400 TL++ Sbjct: 416 TLIS 419 >UniRef50_Q2RRB3 Putative uncharacterized protein n=2 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRB3_RHORT Length = 472 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 120/453 (26%), Positives = 189/453 (41%), Gaps = 56/453 (12%) Query: 4 SQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-----VGLGVKVAGIT 58 + AVS +NA ++++ I NN+ANS+T G+K+ ASF + G+ G GV + Sbjct: 21 NVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGVVASATQ 80 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNMQGLQL 116 G T D+A+ G F + D +G ++Y+R G F + + +LVN L Sbjct: 81 NVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNNYYL 140 Query: 117 TGYPATGTP----PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GYP T GA+ I++ AAK T+ S+Q L + T Sbjct: 141 QGYPTDRNGVPLTNTGNSGASLETINLAGATGAAKATSEMSIQAVLPAQATAGDSTAVPP 200 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS----------------- 215 A Y V ++DS G AH M+V + K D W + D Sbjct: 201 VAA--YTSSSDVEIYDSLGVAHTMTVKWTKMSDTKWTMTLYDPKLSSDMTGDATGAISST 258 Query: 216 -----------SDPNSIAKTATTLEFNANGTL-VDGAMANNIATGAINGAEPATFSL--- 260 P + A +EF G L +A I A NG A + Sbjct: 259 TTGVTDVPANAGPPATSHGIAVDVEFTDQGLLKTPSVLALKITPDASNGTGAAISEIALN 318 Query: 261 -----------SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 ++ N A ++ Q+G G S I+ G V N++N + Sbjct: 319 LGTAGKANGLSTYSNEDSDGKPAVDLKKVVQDGVTYGTYYSNTISKAGLVYANFTNGISY 378 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 + Q+ LA F+N GL + +SAT SG TAGTG G +++G++E+S VD + Sbjct: 379 PIYQVPLAMFSNVNGLEAVSGTAYSATVKSGTPTYVTAGTGGSGGVSSGSVESSTVDTAA 438 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E +IV+Q+ Y + Q I + ++ L++ + Sbjct: 439 EFSKLIVSQQAYSAATQIISSNQEMFQNLISAK 471 >UniRef50_Q5FS48 Flagellar hook protein FlgE n=2 Tax=cellular organisms RepID=Q5FS48_GLUOX Length = 411 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 119/425 (28%), Positives = 190/425 (44%), Gaps = 47/425 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV-----GLGVKVAG 56 A AVSGLNA + + NNIANS T G+K+ T SF D +++ L VA Sbjct: 7 AVHTAVSGLNAQSHAFTDLSNNIANSQTTGYKASTTSFEDYVTNNELANDGESLSDSVAA 66 Query: 57 ITQDFT--DGTTTNTGRGLDVAISQNGFFRLVDSNGS-----------VFYSRNGQFKLD 103 T+ T T + +AIS NGFF +V + G +Y+RNG F D Sbjct: 67 TTRQHTDNQCMVTTSTNSTALAISGNGFFNVVQATGQSNDSTPVLGTQQYYTRNGDFSQD 126 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLNSSD 162 +N LVN G L GY T T+ G + + I +P+T+ +T + L+SS Sbjct: 127 KNGYLVNTSGYYLEGYNVDATSGTL--GTSLSAIQVPSTIAFRPTESTKLTATGTLDSS- 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 S S T +DS G A + + + K D W V + + S Sbjct: 184 -------------SSKTVDMSTTAYDSTGAASTVDLSWTKLSDTTWAVKDVNDTTGTS-- 228 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAIN------GAEPATFSLSFLNSMQQNTGANNIV 276 + T+ F+++G + ++ + + P ++S G+ N V Sbjct: 229 -NSATVTFDSSGAVSSVTSQDSTGASSTSSSSFNYTGSPQDMTVSLSGVT---LGSANTV 284 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 + T + G + DG+V+ + N +QL+ +I L FA+ L+++ ++AT Sbjct: 285 SMTSDSVTTGTFSGISMETDGSVMATFDNGYSQLVAKIPLTTFADPNSLSAQNGQAYTAT 344 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 SG + T GTLT G++E S DL+ +L +IVAQ+ Y +N + + T DQ+L Sbjct: 345 SQSGSPQINAVNTNGAGTLTTGSIEESTTDLTGDLSKLIVAQQAYGANTKVVSTADQLLQ 404 Query: 397 TLVNL 401 T + + Sbjct: 405 TTLAM 409 >UniRef50_C8WBV9 Putative uncharacterized protein n=2 Tax=Zymomonas mobilis subsp. mobilis RepID=C8WBV9_ZYMMN Length = 417 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 119/420 (28%), Positives = 192/420 (45%), Gaps = 22/420 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK------VGLGVKV 54 MAF +++GLNAA T+L V NNIANS +YGFK T F ++ A S +G G ++ Sbjct: 1 MAFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPYASAKNIGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRL--VDSNGSVFYSRNGQFKLDENRNLVNMQ 112 QDFT G+ T R LD+ ++ +GFF + ++G++ +R+G F D+N N+V Sbjct: 61 RATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSD 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L Y T + G + K T S + ++ S Sbjct: 121 GHYLQVYATTNSGDIYNNGQTGS----ATGGRTVKNLTLPSYEDQVSISATDGNTVQVGN 176 Query: 173 SNADSYNKKGSVTVFDSQ-----GNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 + A + K TV ++ G K G T ++D A TAT Sbjct: 177 NLAATGTVKIGGTVIENAKITLGGATVQADKTTAKGGVLTITGGTITAADGTISANTATY 236 Query: 228 LEFNANGTLVDGAMANNIATGAIN-----GAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 A T+ A +++ + + S+S + G T +G Sbjct: 237 TSTGATATVTTSAGTSSLTAITELGTLSYNGDTYSGSISTADGTVVTAGTVTASDTDTSG 296 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 L + + DG V ++N +LG + L + N GL S G+ W+ T +SG Sbjct: 297 DTSSALSNISVGTDGKVTATFANGNQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSL 356 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A T G++ +GALE SN+DL++ELVN+I QRN+Q+N++ I T +Q+++ ++N++ Sbjct: 357 NYREADTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNIQ 416 >UniRef50_B0ULI9 Flagellar basal body FlaE domain protein n=10 Tax=Rhizobiales RepID=B0ULI9_METS4 Length = 456 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 119/456 (26%), Positives = 179/456 (39%), Gaps = 63/456 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----KVGLGVKVAGI 57 A AVSGL A A +L+ I NIAN+ T G++ +FAD+ A + V + Sbjct: 6 AMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRIDTTFADLLAEQPNDRQTSGSVAASSQ 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV----------FYSRNGQFKLDENRN 107 + G +TG ++A++ GFF + + + Y+R G F +D++ Sbjct: 66 FTNTLQGNIASTGITTNMALNGGGFFVVRTPSATSGGQPSFTSQDLYTRRGDFAVDKDGY 125 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS------ 161 LVN G L G I I N + A+ TTT S NL S+ Sbjct: 126 LVNGAGSYLVGQSLDPRTGQATGNGV---IRIGNQALPAQATTTISYAANLPSTPGTTGP 182 Query: 162 -------------------DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 P S S S GS+T + + G ++ + + K Sbjct: 183 AVLGALAGGDVRVMSGTSASPATVAASDSGSFLASSLSGGSLTAYSAAGGPVNLQLRWAK 242 Query: 203 TGDNNWQVYTQD------------SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAI 250 + T D S + T FNA+G L A + Sbjct: 243 VAAADSAAGTGDTWNLFYAKQNGTDSTATAWTNAGTAFTFNASGQLTTPAGGSATIPNVT 302 Query: 251 NGAEP-ATFSLSFLNSMQQNTGANNIVATT----QNGYKPGDLVSYQINDDGTVVGNYSN 305 P T +L+ + GA TT QNG G L S + DG V G YSN Sbjct: 303 VDGVPLGTLTLNTASGGLTQYGAAGGQVTTNTLQQNGSASGTLRSLAVTSDGRVTGTYSN 362 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 T L Q+ +A F + L +E ++ T SG + G AGT T+ G +E SN Sbjct: 363 GTTATLAQVGIARFNAPDALKAESLGNYAQTVESGGPVSGLAGT----TVVGGNVEQSNT 418 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 D + E +I+ Q+ Y +N + + T Q+++ LVN+ Sbjct: 419 DTANEFSKLIITQQAYSANTRVMSTAQQMMSDLVNI 454 >UniRef50_Q9Z5T5 Flagellar hook protein n=2 Tax=Zymomonas mobilis RepID=Q9Z5T5_ZYMMO Length = 412 Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 109/420 (25%), Positives = 190/420 (45%), Gaps = 27/420 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA------GSKVGLGVKV 54 MAF +++GLNAA T+L V NNIANS +YGFK T F ++ A G +G G ++ Sbjct: 1 MAFYTSLTGLNAAQTDLSVPSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS---NGSVFYSRNGQFKLDENRNLVNM 111 QDFT G+ T R LD+ ++ +GFF + +G++ +R+G F D+N N+V Sbjct: 61 RATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSPRPPSGTISLTRDGSFLTDKNNNVVTS 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT--------NISIPNTLMAAKTTTTASMQINLNSSDP 163 G L Y T + G + N+++P+ ++ + + ++ Sbjct: 121 DGHYLQVYATTNSGNIYNNGETGSATGGRVVKNLTLPSYEDQVSISSATGETVQVGNNLA 180 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 + +N D+ +T+ + N+ G V T + Sbjct: 181 RTGDVTVTGTNGDTVIHNAKITLGGATINS---------DGSTTGGVLTITGGTIGAGVN 231 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI-VATTQNG 282 + + + + + T S + A N +T ++G Sbjct: 232 SVANTATYTSTKAAAPITTSAGVSTLTGVTDLGTLSYNGDTYTGSPITAFNPQTSTDESG 291 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 L + + DG V ++N +LG + L + N GL S G+ W+ T +SG Sbjct: 292 DTSSALSNISVGTDGKVTATFANGNQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSL 351 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A T G++ +GALE SN+DL++ELVN+I QRN+Q+N++ I T +Q+++ ++N++ Sbjct: 352 NYREADTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNIQ 411 >UniRef50_Q97H59 Flagellar hook protein FlgE n=1 Tax=Clostridium acetobutylicum RepID=Q97H59_CLOAB Length = 423 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 108/462 (23%), Positives = 171/462 (37%), Gaps = 104/462 (22%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + +SGL LD++G+NIANS+T +KS + +F+D + + Sbjct: 4 AMTSGISGLKVNQNKLDIVGSNIANSSTTAYKSQSINFSDAISETIKGASGATANYGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAI-SQNGFFRLVDSNG------------- 90 ++ LGV + I + G+ TGR LDVAI +G+F + Sbjct: 64 PEQITLGVNSSAIITNTASGSVNTTGRNLDVAITDGDGYFMVASGANMADESECINVSTT 123 Query: 91 -----------SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI 139 + Y+R+G F LD NLV G ++ GY G + A+ Sbjct: 124 DHSITSTPSGTDISYTRDGSFNLDNEGNLVTADGRKVLGYSMVGRNTLYEDSADK----- 178 Query: 140 PNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVY 199 T S T S NA +Y Sbjct: 179 ---------TKNIYGNFVSISGAQDETTMAGSDENAATYIAAEG---------------- 213 Query: 200 FVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATF- 258 D + + +A + T+ G +A A A+ Sbjct: 214 -------------GDDLNKSIVAAVDKNPSGSGTATIKKGDVAFVDANDVDLRADNRYLH 260 Query: 259 SLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 +L ++ + T + + + + I DG + N N +GQI +++ Sbjct: 261 TLKIPPTVTKVTATRDASGNAVYSTQELKVKGFSIGQDGVITANLDNGSAAAIGQIAMSS 320 Query: 319 FANNEGLASEGDNVWSATQSSGVALLG------------------TAGTGNFGTLTNGAL 360 F N GL EG N + SSG ++ +G +G + +GAL Sbjct: 321 FTNAGGLEKEGGNYVKPSASSGQPMVRSGAYSNKLDPTFISSAKKEDNSGGYGKMYSGAL 380 Query: 361 EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E SNVDL+++ +MIVA R YQ+N + I T D+IL LVNL+ Sbjct: 381 EMSNVDLAQQFSDMIVASRAYQANGKIITTSDEILQDLVNLK 422 >UniRef50_C6N701 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N701_9GAMM Length = 408 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 89/402 (22%), Positives = 153/402 (38%), Gaps = 36/402 (8%) Query: 31 GFKSGTASFADMFAGSK---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD 87 GFK ++ + G +G GV+V+G+ ++ G D+AI +GFF + Sbjct: 5 GFKRSDVFYSSLGNGQGEEGMGHGVRVSGMRTNYGPGNYLKGMGDSDLAIVGHGFFVVKL 64 Query: 88 SNGSVFYSRNGQFKLDENRNLVN-MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAA 146 N Y+R+G F E+ L++ G Q+ GY + G I + T + + Sbjct: 65 KNNEFVYTRDGHFNF-EDGILIDRKTGGQVQGYDSAGNLAPIHEKGPQTTPGKASRDIFL 123 Query: 147 KTTTTASM---QINLNSSDPLPTVTPFSASNADSYNKKGSV------TVFDSQGNAHDMS 197 K + A + + N + + P P + + K ++D+QG AH ++ Sbjct: 124 KGSFVAHLIDEKKNTDPNIPDPNIPDPTPKAPTEKKNKYENVVLTLDKIYDAQGKAHKVT 183 Query: 198 VYFVKTGD-----NNWQVYT-----QDSSDPNSIAKTATTLEFNANGT----------LV 237 F N + + D D + +EF + + Sbjct: 184 FEFKNEPPLGEQYNLEKFWVLEDVHCDDKDVDITPYYDQKIEFAYSSSGAEPGKDSIQFG 243 Query: 238 DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 NI G+ + + L + N NI +GY G + +++G Sbjct: 244 LNGKQVNIYFGSAHNGSTNSVQLDTVEGAFSNEKRTNIEIDYNDGYGVGKQSYWSFDEEG 303 Query: 298 TVVGNYSNEQTQLLGQIVLANFANN-EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 + Y N QT + LA F + L DN + A + G+ G F + Sbjct: 304 QIAYYYDNGQTIKGIHVGLARFDDMENNLIQTQDNFFRAKTNRGIH-YGRPNNNGFECIR 362 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 LEASNVD + E N++V QR +Q+ +Q + Q+L L Sbjct: 363 ANELEASNVDSTAEFANIVVLQRMFQACSQIMDIDKQLLEEL 404 >UniRef50_A5W0G4 Flagellar basal body FlaE domain protein n=3 Tax=Pseudomonas RepID=A5W0G4_PSEP1 Length = 584 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 99/301 (32%), Positives = 148/301 (49%), Gaps = 27/301 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA LDV GNNIAN T GFK+ A FAD++AG+ +VG GV Sbjct: 1 MSFNIGLSGLYAANKQLDVTGNNIANVNTTGFKASRAEFADVYAGANRLGVGKNQVGNGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 ++A I+Q FT G TG LD+ I GFF L D NGS Y+R G F+ ++ + Sbjct: 61 RLAAISQQFTQGDVNTTGNALDMGIQGQGFFVLSD-NGSKVYTRAGSFQPSKDNFVETSD 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---------- 162 GL+L GY A T + G T++ I + + K T+ INLNSS Sbjct: 120 GLRLQGYMADATGKIQKSG--LTDLKIDTSALQPKPTSLIDQGINLNSSAASIPFQVYDN 177 Query: 163 -PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS----D 217 P + F ++ +Y + + TV D+ G H++ Y+ KT N W +YT D Sbjct: 178 TKPPALAAFDPADPSTYQRSSTSTVLDADGVEHEVQQYYRKTDTNEWTMYTLVDGRNPFD 237 Query: 218 PNSIAKTATTLEFNANGTLVDG-AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 P S A T+ +N++GT+ A + +GA F+++ Q+ + + Sbjct: 238 PASTTPLAGTINYNSDGTISSMLADTTGVPSGASFTVSNGAFAMTGWVPAAQDANGDWVA 297 Query: 277 A 277 + Sbjct: 298 S 298 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 32/274 (11%) Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS--- 216 +S L PF S+ +Y + V+DSQGN H M ++ KTG N W +YT Sbjct: 310 TSPALVANKPFDPSDDSTYTRSFPTKVYDSQGNEHTMEQFYRKTGTNEWTMYTLVDGRNP 369 Query: 217 -DPNSIAKTATTLEFNANGTLVDGAMANN-----------------IATGAINGAEPATF 258 +P S T+ FN++G++ N I + Sbjct: 370 FNPGSTEPLVGTIAFNSDGSVNSMTADNTGHPVGTSFTVVNNTFSMIGWVPAAEDASGNW 429 Query: 259 SLSF-----------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQ 307 S + + S ++ +Q+GY G L + I+ G + ++SN Q Sbjct: 430 SANGAVGDAAGMKMSMASTTSYNTETARMSQSQDGYATGILSNLSIDATGVLFASFSNGQ 489 Query: 308 TQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDL 367 ++ +GQ+ LA+FAN +GL G W+ T +SG+ + + TG G + + +LE SNV+L Sbjct: 490 SRAIGQVALASFANEQGLQQIGSTRWTETYNSGIPGIDSPKTGTLGAIESNSLEGSNVNL 549 Query: 368 SKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++ELV++I AQ YQ+NA+TI T+ ++ T++ + Sbjct: 550 TQELVDLIKAQSYYQANAKTISTESTVMQTIIQM 583 >UniRef50_B9MGE1 Flagellar basal body FlaE domain protein n=3 Tax=Comamonadaceae RepID=B9MGE1_DIAST Length = 531 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 101/280 (36%), Positives = 129/280 (46%), Gaps = 13/280 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M F Q +SGLNA+A NLDVIG+NIANS T GFK+ FA M A G+ G+GV+ Sbjct: 1 MGFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ I Q F G T TG LDVAI+ NGFF L +GS Y+R G FKLD N+V G Sbjct: 61 VSAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLM-AAKTTTTASMQINLNSSDPL---PTVTP 169 Q+ GYP ++ + ++ P T A+ TT NL++ P Sbjct: 121 AQVMGYPID-PVTGLRTSSTAVPLTFPTTAPIPARQTTAIKTAFNLDARTPNAKGDPGAT 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ-DSSDPNSIAKTATTL 228 + S+ V+DSQG A +S YF K G N W +Y Q D A T Sbjct: 180 PPVAATPRTTYGTSLNVYDSQGVATPLSFYFEKNGANTWDIYNQLDDLTTTPPTVPAITG 239 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQ 268 A+ A +AT N T F S Sbjct: 240 RLIADKNGAVAATLEPVATSVANADPALTQKDDFPTSFTY 279 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 3/242 (1%) Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 + + T + +Y+ + ++ S ++ Y T D +D + Sbjct: 293 RETTLSFTNPEDAWDFTYSDAPTNSLVASARLKDNLVDYAGGTSPAGGTFGVADLTDAPA 352 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 AK + L N + + + G+ P T L+ + Q + +Q Sbjct: 353 AAKQSFELALMVNPSPANPNSPTAPGSNPAPGSYPVTLDLN---KVTQFGTKFAVSELSQ 409 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +GY G+L + ++G ++ YSN T+ GQI LA+F N +GLA+ G N W T SG Sbjct: 410 DGYTSGELTGINVENNGMIMTRYSNGVTRAEGQIALASFRNTQGLAAVGGNNWVETYESG 469 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 +LG GNFG L GALE SNVDL+ ELVNM+ AQR YQ+NAQTIKTQDQ+++TLVN Sbjct: 470 QPVLGAPTDGNFGALRAGALEDSNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVN 529 Query: 401 LR 402 LR Sbjct: 530 LR 531 >UniRef50_B5JK44 Conserved domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK44_9BACT Length = 510 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 112/507 (22%), Positives = 181/507 (35%), Gaps = 108/507 (21%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------------------ 43 A S +S LN+ + ++VIGNNIAN T FKS +++ F Sbjct: 5 ALSSGISALNSFSKGMEVIGNNIANVNTVSFKSSRIKYSETFNQVLKQSAPSPSSGDRSN 64 Query: 44 -AGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQF 100 S+VGLGV+V GI F G ++T + D+AIS GFF + D + F +R G F Sbjct: 65 VQASQVGLGVQVEGIVGQFHQGGLSSTNQLTDLAISGEGFFLVEDPKNATSQFATRGGDF 124 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPT--------------------NISIP 140 ++D+ LV G+++ G + G + +I + Sbjct: 125 RIDDRGFLVTSGGMRVQGLTGGSIGFEVDVGEDGKWQFVPNEDTQNGTIAPESYGDIRLD 184 Query: 141 NTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF 200 A+ + L + + + +A GS+ D G SV + Sbjct: 185 YDKGDAEVVNSKHTSGTL-ARNSVMFTNDLVGRDASGNAVLGSIPTPDGNGVIDTDSVVY 243 Query: 201 VKTGD----NNWQVYTQDSSDPNSIAKTATTLEFNANG-----TLVDGAMANNIATGAIN 251 + ++ T D + F TL + + ++ + Sbjct: 244 GDASNPHRVGSFVFSTNSDGDATGVEGVTGWHAFMEEAVANLKTLRNVSNEGSLTGVVTD 303 Query: 252 GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV--------SYQINDDGTVVGN- 302 S F +M + +G L+ + I++ TV Sbjct: 304 AEIEQAVSSDFFYAM-FGADIDAAANINMDGTAVQQLMIGNGDLTWNNTIDEQATVTAIM 362 Query: 303 ---------------------------------------YSNEQTQLLGQIVLANFANNE 323 +N + GQI L +F + Sbjct: 363 ESFPGSLTEAESLISAVRADKTPELSRFSIDDQGSIVYFLNNGDSFERGQIQLIDFNDKT 422 Query: 324 GLASEGDNVWSATQSSGVAL--------LGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 L EG N++S+ ++GV L AGT G++ GALE SNVDL+ E NMI Sbjct: 423 ALIREGQNLYSSFGAAGVKESQNGNIDGLQVAGTNGLGSIQQGALELSNVDLTNEFANMI 482 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 QR +Q+ ++ I D IL +VNL+ Sbjct: 483 TTQRGFQAGSRIITVSDDILQEVVNLK 509 >UniRef50_D1B6B8 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B8_THEAS Length = 636 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 94/283 (33%), Positives = 139/283 (49%), Gaps = 16/283 (5%) Query: 136 NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGS------VTVFDS 189 ++S L+AA + T + ++D L V A+ + N++ S + ++DS Sbjct: 353 DLSAATNLLAAAQSPTGNAVTVQATTDGLGLVVKDGATTVATLNQRLSSVHTSKMDIYDS 412 Query: 190 QGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI-AKTATTLEFNANGTLVDGAMANNIATG 248 GNAH + V + K +N W+ S+P + F + G + + Sbjct: 413 LGNAHTLEVSWEKIDNNQWRWRAFLPSEPGITMTDNTGVINFTSEGKIEGVDTFDVTINF 472 Query: 249 AINGAEPATFSLSFLN---------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 A GAE +T L F + Q A A Q+GY G L Y ++ DGTV Sbjct: 473 AALGAEDSTVRLDFSGRSFDKDAIEGVTQYGSAFTTKAYYQDGYPMGVLQDYAVSSDGTV 532 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 G YSN Q Q L ++ LA FAN +GL E V+S + +SG+A + G G + Sbjct: 533 QGVYSNGQRQPLYKLALALFANPQGLFKESGTVFSQSANSGIAQIVKPMEGGAGRIMGSN 592 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDLS+E VN+IVAQR +Q+NA+ I T DQ+L L+NL+ Sbjct: 593 LEMSNVDLSQEFVNLIVAQRGFQANARVITTSDQVLEELINLK 635 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 112/319 (35%), Gaps = 40/319 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSG+ T LDV+GNNIAN T GFK F D+ + Sbjct: 4 SLYSGVSGVKGHQTYLDVVGNNIANVNTTGFKRSNVLFQDLLYQNVRGAMAPDAGQGRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 +VGLG V + T GT TG D IS +G+F + + FY+R G + Sbjct: 64 INPMQVGLGSMVGAVETIHTQGTMQYTGNRNDFGISGDGYFVVK-TGADTFYTRAGSATM 122 Query: 103 DENRNLVNMQ-GLQLTGYPATGTPPTIQQG--ANPTNISIP-NTLMAAKTTTTASMQINL 158 D NLV G GY + P + +I+IP + A TT + NL Sbjct: 123 DSGGNLVMSGMGYIYQGYKMSKDPTDPTKYVEGPLGDINIPVGQKLEANKTTLGGYRCNL 182 Query: 159 NSSDPLPTVTPFSASNADSY----NKKGSVTVFDSQG----------NAHDMSVYFVKTG 204 +S + ++++ ++ G + +++ F G Sbjct: 183 DSRVKAHLPMGITGNDSEFKIVLGTNTYTLNQVSEGGAVASFMTLSDGTNSVTLGFPAAG 242 Query: 205 DNNWQVYTQDSSDPNSIAKTATTLEFN-ANGTLVDGAMANNIATGAINGAEPATFSL-SF 262 + + A T ++ A G L N+ + S+ Sbjct: 243 PIVDPTSLLPNLTQITTAGAFTGASYDPATGKLTVTDGTNSSTVDLAALMDFQVLSVKDA 302 Query: 263 LNSMQQNTGANNIVATTQN 281 LN+ N VATT + Sbjct: 303 LNNTYYYLAEFNDVATTGD 321 >UniRef50_A6Q2N3 Flagellar basal body and hook protein FlgE n=2 Tax=Bacteria RepID=A6Q2N3_NITSB Length = 533 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 36/340 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------KV 48 +F SGLNA T L VI +NIAN T GFK +F+D+ A S ++ Sbjct: 4 SFYTGNSGLNANKTWLGVISDNIANVNTNGFKQERVNFSDLVASSLTTYSSSGAPRNKEI 63 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRN 107 G G VAG +DF+ G+ NT + L +A+ GFF + + + +Y+R G F++D N + Sbjct: 64 GGGAFVAGTIKDFSQGSFKNTNQPLSLALDGEGFFMVKNPSADLTYYTRAGDFRVDANGD 123 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQ--INLNSSDPLP 165 ++N GL+L G+ T +I+IPN L K T + + NL++ Sbjct: 124 VINPAGLKLQGWMLD---ETGNIAGAMGSINIPNNLD-PKNTDKVAFENPANLDAGVDA- 178 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS-----DPNS 220 F S+ +Y+ ++T +DS G +H + YF+KT N W+V+TQ + + Sbjct: 179 ITKTFDPSDPTTYHYVNTITTYDSLGTSHVLKHYFIKTDINTWRVFTQLDDRAVTYNDGT 238 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 A L+FN G L + AT + +E AT F + + Q Sbjct: 239 NEYAALELKFNGKGELTSAQYISQPATQSEAASEAATDDGIFSVTNIPVLPGTIYITQDQ 298 Query: 281 NGY-------KPGDLVSYQIND-DGTVVGNYSNEQTQLLG 312 NG G++V Q + GT+ +Y + + ++G Sbjct: 299 NGNSVTWNDDGSGNIVDIQTGEIKGTI--SYDDGKITIIG 336 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 15/270 (5%) Query: 142 TLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF- 200 A T N+ +T N+ ++N GS + D Q ++ + Sbjct: 269 AASEAATDDGIFSVTNIPVLPGTIYITQDQNGNSVTWNDDGSGNIVDIQTGEIKGTISYD 328 Query: 201 --------VKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAING 252 N T + D + T + ++ + +N + NG Sbjct: 329 DGKITIIGAAGDGNTTGTLTVNYKDFSDTTTANVTDLGAIKTSTINYS--DNTSRFLNNG 386 Query: 253 AEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLG 312 A + F Q ++ I QNG GDL+S + +DG + G Y+N Q + + Sbjct: 387 ATDTAITEDFKKLTQLDS--EFIFYAQQNGASKGDLMSISVTEDGIIKGTYTNGQVKDVA 444 Query: 313 QIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELV 372 ++ +A F + E L +GDN++ Q + ++ G + +G LE SNVD+S+E + Sbjct: 445 RLAVATFKDKEILVRKGDNLYLPNQQTFTPIIVPGGV--ISKIRSGMLEMSNVDISQEFI 502 Query: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 N+I AQR YQ+NA+TI T DQIL T ++++ Sbjct: 503 NLITAQRAYQANAKTITTSDQILQTTMDIK 532 >UniRef50_Q6AJT3 Related to flagellar hook protein (FlgE) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJT3_DESPS Length = 566 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 91/321 (28%), Positives = 142/321 (44%), Gaps = 23/321 (7%) Query: 97 NGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI 156 G+ ++D NLV+ +I + A +++ + Sbjct: 253 AGEVEIDAAGNLVDTSSATTPKANFDPFATSIAWDDTGATTTAVTASTAGSPSSSIDKSL 312 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS 216 N S + F + ++ SV +FDS GN H +S YF KT DN W Y Sbjct: 313 RENKS-----ICTFDYKDPKTFTYSASVQIFDSLGNPHLISTYFRKTDDNTWDTYYSLEK 367 Query: 217 DPNSIAKTA------TTLEFNANGTLV---------DGAMANNIATGAINGAEPATFSLS 261 + S+ T L F + G V NG+EP +++ Sbjct: 368 EDGSVIPADPNAISLTQLRFGSEGQPVDSAGLPLDGPPTATTEEPIDWGNGSEPTPITVT 427 Query: 262 FLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 F Q ++ +++ QNGY G+L I++ G V+ YSN + + + I LA F N Sbjct: 428 F--DTTQFNSSSKVISQEQNGYGAGNLSGVNIDEGGNVIAAYSNGKNRNIAAISLAKFQN 485 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL EG+N+++AT +SG +G G G + +LE SNVD+S E V MI QR Y Sbjct: 486 PAGLTMEGNNLFAATGTSGAPRVGLPGPE-LGKVFTNSLEQSNVDMSVEFVRMITIQRGY 544 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 Q+N++ I T D++L L+NL+ Sbjct: 545 QANSKIITTVDELLGELINLK 565 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 34/309 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 A VSGLN + VIGNN+AN+ T +K F+D+ + S+VG GV Sbjct: 6 ALYTGVSGLNTNGQAMTVIGNNLANTNTIAYKGSRTMFSDLLSSSVTGSGGTSQVGRGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQ 112 ++ + DF+ GT +T GLD+AI N FF L SN + YSR G FK +E LVN Sbjct: 66 LSRVDNDFSQGTFESTSSGLDLAIEGNSFFLLSPSNDQSIHYSRAGSFKFNEGGYLVNPG 125 Query: 113 GLQLTG--YPATGTPPTIQQGANPTNISIPNT-LMAAKTTTTASMQINLNSSDPLPTVTP 169 GL++ G Y A G G +P++I + ++ T+ M NL+S+ + Sbjct: 126 GLRVQGIAYGADGEL----AGGDPSDIFLDGAGMIKGAATSEMIMNTNLDSNAKI-FPID 180 Query: 170 FSASNADSYNKKGSVTVFDSQ---------GNAHDMSVYFVKTGDNNWQVYTQ------- 213 F ASN +SYN +T+ + Y+ KT +N+W+ Y Sbjct: 181 FDASNTNSYNFSEELTLTGPATVPATVPPSNSTITAQTYYRKTAENSWECYYTAKETMAD 240 Query: 214 -DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 + + + A +E +A G LVD + A A + + + Sbjct: 241 GTAGSSTAASIKAGEVEIDAAGNLVDTSSATTPKANFDPFATSIAWDDTGATTTAVTAST 300 Query: 273 NNIVATTQN 281 +++ + Sbjct: 301 AGSPSSSID 309 >UniRef50_B2V236 Flagellar hook protein FlgE n=9 Tax=Clostridium RepID=B2V236_CLOBA Length = 366 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 98/432 (22%), Positives = 157/432 (36%), Gaps = 103/432 (23%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +SG+ LDVIGNNIAN +T GFKS +A F+DM Sbjct: 4 SMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNASEATAPTSTKGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG +++ I + G +TGR LDV +D Sbjct: 64 AKQVGLGSQLSSINKVMGQGNALSTGRSLDVC-------------------------VDG 98 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + ++ +G ++ Y A T T AK T S L Sbjct: 99 DGYIMVSKGPEV--YAADKT----------------GTGADAKNTIGISTSGKLTGGGEN 140 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 + + + + + G + + Y +K GD+ D ++ Sbjct: 141 EILYTRDGN----FTLDHEGNLLTADG--YRVMGYLLKDGDDGKPSVAWGEKDGDAPVAN 194 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 + + +GA N + A +G Sbjct: 195 YVDADSKNLHAVGEGAQLNTLKIPDKVLAP----------------------KRDPDGKP 232 Query: 285 PGDLV-----SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 + V S+ I DG + + LGQ+ +A F N EGL S G N+ + +S Sbjct: 233 TAEFVEVPVKSFSIGKDGVITAVLGDGSRTALGQVAMATFKNPEGLTSIGGNLLQTSPNS 292 Query: 340 GVALLGTA----------GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 G ++ T + FG GALE+SNVDL+++ +MI A R +Q++++ I Sbjct: 293 GPEIIKTPVGKLATDFSDNSKGFGEFVQGALESSNVDLTEQFTDMITATRAFQASSKMIT 352 Query: 390 TQDQILNTLVNL 401 T D+IL T+ L Sbjct: 353 TGDEILQTITGL 364 >UniRef50_C0QPA5 Flagellar basal body and hook protein FlgE n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA5_PERMH Length = 540 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 99/339 (29%), Positives = 152/339 (44%), Gaps = 36/339 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------KVG 49 +F +GLNA L VI +NIAN T GFK+ +F D+ + S ++G Sbjct: 4 SFYTGNAGLNANKNWLSVISDNIANVNTIGFKAERVNFEDLISSSLTTFANNSPKNMEIG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G V T+DF+ G NT D+A+ GFF + D+ +Y+R GQF+ D N +L+ Sbjct: 64 GGSFVGSTTKDFSQGALMNTNTPTDLALDGEGFFMVRDAQDVTYYTRAGQFRTDANGDLI 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQ-INLNSSDPLPTVT 168 N+ G++L G+ I+IPN + TT A + NL++ L Sbjct: 124 NLNGMKLLGWQLDDAGNI---AGAIGAINIPNDMPPHVTTKLALKEPTNLDAGSEL-VTG 179 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP-------NSI 221 F S+A +Y+ ++TV+DS G H+ +YFV TG N W+V+ +P ++ Sbjct: 180 VFDTSDARTYSYVNAITVYDSLGVPHEAQLYFVHTGPNQWRVFGLMDDEPIQFNVPGDAN 239 Query: 222 AKTATTLEFNANGTLVD----GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 A +EFN G + G + TGA E LN+ G+ I Sbjct: 240 TYDALVVEFNGVGQINRVFGYGINTDQTITGAGTETESGDLGQFTLNNTPVLPGSVVITQ 299 Query: 278 TTQNGYKPGDLVSYQIN--DDGTVVGNYSNEQTQLLGQI 314 T +G +Y +N DDG N +++G I Sbjct: 300 YT-DG-----ATTYNVNWIDDGHGNIIDLNNDNRVVGSI 332 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 8/291 (2%) Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 ++ GY G + + TL + + V Sbjct: 255 NRVFGYGINTDQTITGAGTETESGDLGQFTLNNTPVLPGSVVITQYTDGATTYNVNWIDD 314 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 + + + V S ++D F+ N T + + T +T Sbjct: 315 GHGNIIDLNNDNRVVGSI--SYDDGTVFINQFAGNGATETLTAGSYKTYDTTVSTNTIPP 372 Query: 233 NGTLVDGAMANNIATGAINGA-EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 + + NN + +N P F+L N Q + I Q+GY GDL+S Sbjct: 373 DSISIVPIPVNNPNSATLNTGGNPIQFTLDIQNMKQVES--EFIFYAEQDGYAKGDLLSV 430 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 +++DG V G YSN Q + +I +A F + E L +G+N++ + ++ G Sbjct: 431 SVSEDGLVRGVYSNGQVKDWARIAIATFNDKEILIRKGNNLFLPNSQTYTPIIVPGGV-- 488 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + G LE SNVD+S+E +N+I AQR YQ+NA+TI T DQ+L +N++ Sbjct: 489 ISKIRGGFLELSNVDISREFINLITAQRAYQANARTITTSDQVLQETMNIK 539 >UniRef50_Q485P3 Flagellar hook protein FlgE n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485P3_COLP3 Length = 554 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 91/305 (29%), Positives = 133/305 (43%), Gaps = 24/305 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SGLNAA +LDV NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGLNAAQKDLDVSSNNIANVNTVGFKESRAEFVDVYASSLLAAGKTKVGDGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNM 111 A + Q F+ G+ T LD+AI+ NGFF V G Y+R GQFKL+ + +VN Sbjct: 61 TADVAQQFSQGSIQFTNNALDLAITGNGFFATVPELGSLETSYTRAGQFKLNSDNFVVNS 120 Query: 112 QGLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDP--LPTVT 168 QG L G+P + + I IP T+ +++NL + Sbjct: 121 QGGHLLGFPVNPDGSSASVSLSTAEPIRIPTESGTPTKTSEVDVRMNLPAGAGYITSAPA 180 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDSSDPNSIAKT 224 F + ++N SVT+FDS G +H M+ +FVK N W ++ P +A Sbjct: 181 NFDPEDPLTFNSSTSVTIFDSLGKSHIMTYFFVKDDPAVAPNQWMMFASVDGKPIDLADD 240 Query: 225 AT--------TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 T + AN ++ + T A T + + + + Sbjct: 241 PTVQATAEAAVVTAQANVATAQASVVTSQTTLNTTQATLNTEEANVITAQATYDAIVGVP 300 Query: 277 ATTQN 281 Q+ Sbjct: 301 TAAQD 305 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 131/288 (45%), Gaps = 17/288 (5%) Query: 132 ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQG 191 + T ++ + + + Q ++ +PT + A + ++ D+ Sbjct: 267 TSQTTLNTTQATLNTEEANVITAQATYDAIVGVPTAAQDATLAAVIATRDAAIITRDAAL 326 Query: 192 NAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANN------- 244 NA +S + ++ + L +N++G + + + Sbjct: 327 NAQTVSETNLTNSLAIASTAISATTPESGTGTKGARLTYNSSGDFISQSPSPTNGGIRTV 386 Query: 245 -IATGAINGAEP-ATFSLSF--------LNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 ++ NGA+P T + F N Q + A Q+G G L +I Sbjct: 387 DFSSHLPNGADPTQTVKVDFNLDTAGPNPNEPTQFASNFEVTALNQDGLAVGRLTGIEIG 446 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 DG V YSN +Q L +I + NFAN +GL+ G + W + SG AL G AG+G FGT Sbjct: 447 VDGLVRATYSNGTSQPLSRIAMVNFANEQGLSQTGGSNWKESLVSGKALAGEAGSGTFGT 506 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + + ALE SNV+L+ EL+++I AQRN+Q+N++ ++ +Q+ T++ +R Sbjct: 507 INSSALEQSNVNLTTELIDLISAQRNFQANSRALEVDNQLNQTILQIR 554 >UniRef50_Q48GC1 Flagellar basal-body protein, putative n=6 Tax=Pseudomonas syringae group RepID=Q48GC1_PSE14 Length = 586 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 142/265 (53%), Gaps = 25/265 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F+ A+SG++AA L+V GNNIANS T GFKS A F+ +++ S+ VG GV+ Sbjct: 1 MSFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVR 60 Query: 54 VAGITQDFTDG-TTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 +A + Q+F G + T +G LD+ I NGFF + D GS+ Y+R G F D +V+ + Sbjct: 61 LASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSD-GGSLAYTRAGAFLKDAANFVVDSE 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS-DPLPTVTPFS 171 G +L GY A + T++ I + ++A+ TT + INL++S L + F Sbjct: 120 GGRLQGYAANEQGEI--KRGLRTDLQIDTSNVSARATTRVAENINLDASLPSLARLPVFD 177 Query: 172 ASNADSYNKKGSVTVFDSQGNA---------HDMSVYFVKTGDNNWQVYT----QDSSDP 218 ++ +Y + T+ D+ A H++ YFVKTGD+ W +Y ++ DP Sbjct: 178 PADPATYTRAVGRTIQDAGSGAGATAVPASDHELKQYFVKTGDSQWSMYVLIDGRNPVDP 237 Query: 219 NSIAKTATTLEFNANGTLVDGAMAN 243 NS+A TLE NG+L + Sbjct: 238 NSVAPLHVTLEQRPNGSLSYSGNSQ 262 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 82/323 (25%), Positives = 140/323 (43%), Gaps = 36/323 (11%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 V+ L G+ N T+ + SM ++ P V Sbjct: 267 VSDTEFALQGWRPAEEVGGAWVSNGAAN---GGTVSLPLNNGSISMLDPGDALMDRP-VP 322 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----QDSSDPNSIAKT 224 F S+ +Y+ + +FDSQGN H++ YFVK G N+W+++ ++ P+S Sbjct: 323 AFDPSDLKTYSDMFANAIFDSQGNQHELKQYFVKDGTNSWRIHALIDGRNPQMPDSTDPL 382 Query: 225 ATTLEFNANGTLVDGAMANNIATGAIN---------------------------GAEPAT 257 + F++ G + A+ N Sbjct: 383 TANIVFDSGGWVQSLTGGPGFASTHSNGLQLTGWTPAMPAERVTGPEKWVPNGAAGSAKG 442 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 ++ F N +Q N A++ +T +G+ G L S + DG + ++N + +GQ++LA Sbjct: 443 ITIDFTNLLQHNA-ASSRSSTHVDGHAAGQLSSLSVGRDGILRAGFTNGMNKNIGQVILA 501 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 +FAN +GL + D W+ + SGVA +G G G+L LE SNV L+ EL+ +I A Sbjct: 502 SFANPQGLQARSDTRWTESADSGVADYDVSGVGTLGSLIGDGLEGSNVVLADELIALIQA 561 Query: 378 QRNYQSNAQTIKTQDQILNTLVN 400 Q YQ+N++ I T+ ++ TL+ Sbjct: 562 QTAYQANSKAISTEATVMQTLIQ 584 >UniRef50_Q2LSZ5 Flagellar hook protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ5_SYNAS Length = 518 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 24/288 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +GLNA+ +D+IGNN+ANS+T G+KS FA+M + S +VG GV Sbjct: 15 ALWIGTTGLNASQRQMDIIGNNLANSSTLGYKSADTQFANMLSQSLTSGSGSFQVGQGVA 74 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + F G+ +TG D+AI GFF + D G+++Y+R G F +D++ LV++ G Sbjct: 75 ISSVNTKFDQGSFESTGSVTDMAIDGEGFFPVKDKEGAIYYTRAGAFVIDKDGYLVDVNG 134 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++ G + A T+I + N A T T + +NLN S+ T Sbjct: 135 YRVQGI----NLFSAPGDAELTDICLKNIQSAPSATKTFGIGVNLNDSEDAGT------- 183 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + S VFDS+G H++S+ F KT + + + +I + ++F+ + Sbjct: 184 -----SFVVSQNVFDSKGAIHNLSLTFTKTEGDGYWGCQAKLDNVETINSSCCGIKFDES 238 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 G L + + + A G + +++ + N + Sbjct: 239 GNLKNTYLTSCSAGAVSGGGAITSTTVNKPGQLYLNGTIACTRGADAD 286 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 4/264 (1%) Query: 142 TLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFD--SQGNAHDMSVY 199 + A T+TT + L + + A + + F GN ++++ Sbjct: 255 SGGGAITSTTVNKPGQLYLNGTIACTRGADADTWTISSSEYPNLEFSLGDLGNDDEIAID 314 Query: 200 FVKTGDNNWQVYTQDS-SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATF 258 G + + +D +S T + +E NA + N A A Sbjct: 315 LDGKGGTDITLALGAGFADLSSFDLTISQVESNAADVTFEFPGLANGADIGSGNALTWNL 374 Query: 259 SLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 + + I A +GY G L S + DG + G ++N QT LGQ+VLAN Sbjct: 375 IGDDALQVTGYAATSVIKALEVDGYTSGVLKSLSVEKDGIISGIFTNGQTSDLGQVVLAN 434 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 F N L G + ++ T SG A++ + GTG G + + +LE SN D+S E VNMI AQ Sbjct: 435 FPNVGALRKIG-SYFAETNFSGAAIINSPGTGGLGEIMSNSLEQSNTDVSMEFVNMINAQ 493 Query: 379 RNYQSNAQTIKTQDQILNTLVNLR 402 R YQ++A+ I T D++L L+N++ Sbjct: 494 RAYQASARIITTSDEMLTELMNIK 517 >UniRef50_C1DC21 Flagellar hook protein FlgE n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DC21_LARHH Length = 526 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 105/310 (33%), Positives = 143/310 (46%), Gaps = 21/310 (6%) Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L N G + A G P + + + TT A + + Sbjct: 225 GQLFNADGTPIN--DAAGAPTFYDKKLGWLDAAGTVQQYTPNATTPAGAAGTIAAVSIA- 281 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ---------DSS 216 F+ S+ +YN K ++T +DS GN ++VYF KT D W VY D Sbjct: 282 ----FNPSDPATYNSKTALTAYDSLGNPIQVAVYFKKTADGQWDVYATAKHTDGSVVDLG 337 Query: 217 DPNSIAKT----ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 N+ A T L F +G L +G G P F S Q + Sbjct: 338 TGNTAASPYTALGTGLAFGPDGKLTNGGPIAAATYTPAGGGAPLALKFDFSGS-TQFGTS 396 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 + Q GY + + QI+ G V YSN QT+++GQ+VLANFAN +GL G+N Sbjct: 397 FAVNELVQPGYASAVVSNLQIDKTGIVSARYSNGQTKVIGQVVLANFANQQGLQPIGNNR 456 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 W T +SG L G+ N G + + ALE SNVDL+ ELVNMI AQR YQ+NAQTIK D Sbjct: 457 WMETYNSGNPTLNDPGSTNVGLIQSQALEDSNVDLTGELVNMITAQRYYQANAQTIKVHD 516 Query: 393 QILNTLVNLR 402 Q+L +L+ +R Sbjct: 517 QVLQSLMQMR 526 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 89/341 (26%), Positives = 139/341 (40%), Gaps = 31/341 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 MAF +SG+NAA+ LD IGNN+ANS+T GFK A FADMF A ++ G+GV Sbjct: 1 MAFQHGLSGINAASKQLDAIGNNVANSSTVGFKGSRAEFADMFAANFYGVAATQNGIGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 I Q F G T TG LD+AIS NGFF + ++NG + Y+RNGQF++D + N G Sbjct: 61 TTLIAQQFGQGNITTTGNQLDLAISGNGFFVMQNANG-ISYTRNGQFQIDREGYI-NNNG 118 Query: 114 LQLTGYPATGTPPTIQ-QGANPTNISIPNTLMAAKTTT----TASMQINLNSSDPLPTVT 168 +L G+ Q N + I N+L+ + + + INL+S + Sbjct: 119 DKLMGWQVDDRTTPPSVQNGNLGPLKIDNSLLEPRPSDYGGESMRFNINLDSRNNPVEYN 178 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSV----YFVKTGDNNWQVYTQDSSDPNSIAKT 224 + + + + + + + Y + QV ++D I Sbjct: 179 ALTEGASLTGVTTLAPPATADFNASTKVKLPDGRYVITGTSGTTQVGQLFNADGTPINDA 238 Query: 225 ATTLEF--------NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 A F +A GT+ GA + + + + N+ + Sbjct: 239 AGAPTFYDKKLGWLDAAGTVQQYTPNATTPAGAAGTIAAVSIAFNPSDPATYNSKT-ALT 297 Query: 277 ATTQNGYKPGDLVSYQINDDG----TVVGNYSNEQTQLLGQ 313 A G V ++ DG +++ LG Sbjct: 298 AYDSLGNPIQVAVYFKKTADGQWDVYATAKHTDGSVVDLGT 338 >UniRef50_C1TKJ0 Flagellar hook protein FlgE n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKJ0_9BACT Length = 875 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 12/272 (4%) Query: 141 NTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF 200 N + T ++ + + +D V S +G T++DS GN H + V + Sbjct: 605 NVTIKPSPTDSSKLIFTYDGTDGGDPV--SSIREGSDSVHEGKGTIYDSLGNEHTLEVVW 662 Query: 201 VKTGDNNWQVYTQDSSDPN-SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 K G N W +P ++ + F++ G L+ G + GA+ A Sbjct: 663 KKVGSNAWSWEAFLPDEPELKLSDNKGVIRFSSEGKLLSGGENTISIGFSAIGADDADVV 722 Query: 260 LSFLN---------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 L F + Q A TQNGY G L + +++DGT+VG Y N Q + Sbjct: 723 LDFSGKSFDKEEIEGVTQYGSAFTTKPYTQNGYSMGILEDFSVSNDGTIVGIYDNGQNRG 782 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 L ++ LA FAN +GL G+ +S + +SG + A GT+ +LE SNVD+++E Sbjct: 783 LYKMALAMFANPQGLVKTGNTCFSKSINSGDPSIVNAMVEGAGTIAGSSLEYSNVDITEE 842 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++I QR +Q++A+ I T D +L L+NL+ Sbjct: 843 FTDLITTQRGFQASARVITTSDSVLEELLNLK 874 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 89/180 (49%), Gaps = 21/180 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSG A LDV+GNNIAN T GFK T F D+ + + Sbjct: 4 SLLTGVSGAKAHQKRLDVVGNNIANVNTVGFKKSTVVFQDLLSQTERGAMAPDGNVGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV+VAGI T GT + TG D+AI G++ + + Y+R GQF LD Sbjct: 64 AKQVGLGVQVAGIETIHTQGTVSQTGNRTDMAIQGEGYYVVRN-GAENLYTRAGQFVLDS 122 Query: 105 NRNL-VNMQGLQLTGYPAT-GTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSS 161 N +L ++ G ++ G T I G+ ++I+IP M AK T+T + NL+S Sbjct: 123 NSDLAMSGTGYRVQGNEMTVDEDGVISTGSELSDINIPIGRKMEAKATSTVGYRCNLDSR 182 >UniRef50_B1XWJ5 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWJ5_LEPCP Length = 501 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 94/246 (38%), Positives = 130/246 (52%), Gaps = 13/246 (5%) Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS-----DPNSIAK 223 + SYNK S+T +D +G M+ YF K+ + W +Y + D + Sbjct: 257 QIDFEDPASYNKATSMTAYDVKGQPVAMTYYFQKSAPDTWNIYATANGTSINVDASGRPV 316 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPAT-------FSLSFLNSMQQNTGANNIV 276 T L+F +G A + A + S F Q ++ Sbjct: 317 PVTQLQFPTSGAAPISPAAPVVFDVPGTTAADGSTTEPITGVSFDF-TQATQYGATFSVT 375 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 TQNGY PG++ S + +G + YSN T+ GQI +ANF N +GL + G N W++T Sbjct: 376 DLTQNGYAPGEMSSLNVESNGIITARYSNGLTKSAGQIEVANFRNPQGLQAVGGNAWAST 435 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG A +GT +GNFG L +G+LE SNVDL+ ELVNMI AQR YQ+NAQTIKTQD +L Sbjct: 436 FASGSATVGTPDSGNFGQLQSGSLEDSNVDLTAELVNMITAQRVYQANAQTIKTQDSVLQ 495 Query: 397 TLVNLR 402 TLVNL+ Sbjct: 496 TLVNLK 501 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 72/168 (42%), Positives = 103/168 (61%), Gaps = 9/168 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGLNA + NL+VIGNN+AN+ TYG K+ A FADM+A + VG+GV+ Sbjct: 1 MNFQQGLSGLNATSKNLEVIGNNVANANTYGTKASRAEFADMYASTINNIGTGNVGIGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 VA ++Q FT G+ + T LD+AI+ GFF++ D+ G+ Y+RNGQFKLD+ +VN G Sbjct: 61 VAAVSQQFTQGSLSATDNPLDMAINGAGFFQVKDTAGNQLYTRNGQFKLDKEGFIVNNSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 +L GYPA + A + +P +A T M++NL+S Sbjct: 121 QKLLGYPANADGVVVPGAAGA--LQLPTAGIAPMATDEVKMEMNLDSR 166 >UniRef50_A6W1A3 Putative uncharacterized protein n=2 Tax=Marinomonas RepID=A6W1A3_MARMS Length = 565 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 17/256 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF--------AGSKVGLGV 52 M F+ A+SG+ A+A L V GNNIAN+ T GFK F D++ +G+ +G GV Sbjct: 1 MGFNTALSGIKASADYLSVTGNNIANADTTGFKKSRIEFDDLYNTSVLGAGSGNNIGSGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 V+ ++Q+F+ G + T LD+AI +GFF ++D+ + Y+R G FKLDEN LV Sbjct: 61 SVSKVSQEFSSGNLSYTDNNLDLAIDGSGFF-VIDAGIANAYTRAGNFKLDENGFLVTNS 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT---P 169 G + G+ A G N ++ IP + + TT+ +++NL+S + Sbjct: 120 GNNVQGFNAVD----GVVGGNLADLKIPTDRIPPEPTTSMGLKVNLDSKNEDVPPFIKAI 175 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSIAKTATTL 228 F ++ D+YN + V D G +H ++ Y+ K N ++V+ + A Sbjct: 176 FDPNDPDTYNFTQTQGVVDGNGQSHIVTYYYAKGELPNTYKVHATVDGNLTDDAGLPFLA 235 Query: 229 EFNANGTLVDGAMANN 244 E A +G N Sbjct: 236 ETYATFNTAEGGTDYN 251 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 23/320 (7%) Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD 162 D N + V L +++ TL A T T + + +SS Sbjct: 249 DYNGDGVEEAPFSLLYVGPNEPNSVDVATGTKAPLAVSGTLGGAAITATLTPEEIRDSS- 307 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ--VYTQDSSDPNS 220 + + F N D+Y+ + T +DS G +H + YF+K G+NN T D + Sbjct: 308 -IVSREAFDPLNPDTYSYGNTRTTYDSLGESHTLGYYFIKQGENNTYELRVTMDGEESFV 366 Query: 221 IAKTA---------TTLEFNANGTLVDGA---------MANNIATGAINGAEPATFSLSF 262 T T + F+A G L+ + I+ + Sbjct: 367 DPTTGEDARYLEKNTAVSFDAAGNLMGVYRGISPLGIEQPVPLEVRGIDPTNRERITQLD 426 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L Q AN QNG+ G+L + DG ++ NY+N+QT LGQI LA F + Sbjct: 427 LAGSTQFALANT-DTFEQNGFSAGELQGVSFDSDGLLIANYTNQQTATLGQIALATFDST 485 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 +GL G +W AT++SG A +G + G + GALE SNVDL+ ELV +I AQRNYQ Sbjct: 486 DGLMPSGHTMWVATKTSGPADIGRPNSATLGKIAGGALEESNVDLTAELVALIEAQRNYQ 545 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +N++T++T++ + T++NLR Sbjct: 546 ANSKTLETENTVTQTIINLR 565 >UniRef50_B9L651 Flagellar hook protein FlgE n=2 Tax=Nautiliaceae RepID=B9L651_NAUPA Length = 853 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 19/296 (6%) Query: 122 TGTPPTIQQGANPTNISI---PNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSY 178 G +N NI+I P+ + T A IN + + ++ Sbjct: 561 DGQLTIKNTSSNSFNINIGGYPDEEKDNQLFTDAFSPIN----GSVAAGGTAISQAMNAA 616 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKT-------GDNNWQVYTQDSSDPNSIAKTATTLEFN 231 S+ VFDS G+ H ++++F KT W+ Y + + ++FN Sbjct: 617 VHTTSIDVFDSLGSKHTLTLHFRKTHTSENPNDPTVWKWYAEVPAPSTLDQPAYGYVKFN 676 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPG 286 +G++ + I + L F + + + TQ+GY G Sbjct: 677 PDGSINSYNPPSLIFNPNNGSSTGQAIQLDFGTMGKFDGITSFEAPSATSGQTQDGYPGG 736 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 DL ++ GTV+G ++N ++ L Q+ +A F NNEGL SEG ++SA+ +SG ++GT Sbjct: 737 DLQQLVVDQTGTVIGVFTNGRSYSLAQVAIAKFVNNEGLMSEGGTLFSASPNSGEPIIGT 796 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 AGTG G++ +LE SNVDLS+ L +IV QR +Q+N++TI T DQ+LNTL+ L+ Sbjct: 797 AGTGGRGSIQPSSLEMSNVDLSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQLK 852 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 29/257 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGLNA +DV NNIAN T GFK +F ++ + + Sbjct: 4 SLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTVKSATAPQGDLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG V+ + F G+ NT + D+AI+ +GFF + G + Y+R G F D Sbjct: 64 SLQIGLGTSVSAVETMFKQGSIQNTDKNTDMAINGDGFFVVSGDGGKTYRYTRAGDFTFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N N V+ G + G+ A TI + ISI P A T+ +++ NLNS D Sbjct: 124 ANGNFVDPNGYIVQGWLADPETHTIDTASGVKPISIPPGLTTPANPTSKIAIKANLNSGD 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + T + ++++ G ++ D + D+++ +I+ Sbjct: 184 HI---TEMDGTRTTVDQTADINGLYNANGEKIQLT------PDVDKITLAIDANNDGTIS 234 Query: 223 KTAT-TLEFNANGTLVD 238 T T + + T D Sbjct: 235 STEVYTFTYGTSQTDTD 251 >UniRef50_B7RBK4 Flagellar hook protein n=3 Tax=Thermotogaceae RepID=B7RBK4_9THEM Length = 623 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 33/334 (9%) Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 LD + N+V ++G T I G N T I + + T ++ + +S Sbjct: 289 LDSSGNVVYNGTTTVSGGSFTINDSDITAGNNYTVILLTPNNASNSLTIAPGAELVIPTS 348 Query: 162 DPLPTVTPFSAS-----NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN--------- 207 + + + S +V V+DS GNA+ + FV+ G+ Sbjct: 349 GEPRFYESDNPTNFVQTDYTSPRYTTAVQVYDSLGNAYTVYYEFVRLGNTTIGSESFKNA 408 Query: 208 --WQVYTQDS------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 W+ YT + A ++F+ +G + ++ + F Sbjct: 409 WIWRAYTDSGEPISLIDEDGGSGYVAGLIDFDESGRPIQYRGLDSSYNLSSGEVRTIQFD 468 Query: 260 LSFLN-----------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 Q +G + + Q+G G L S+ IN+ G ++G +SN T Sbjct: 469 AGQSGDGVVTITADFSGATQFSGDSTLNIPWQDGNPMGVLESFAINEQGEIIGTFSNGLT 528 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 +LGQI LA F N GL+ G++++ + +SGV +G G+G G L GALE SNVDL+ Sbjct: 529 DVLGQIALAVFNNPSGLSEVGNSLYVVSANSGVPKIGAPGSGGRGILIPGALEMSNVDLA 588 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +E MIVAQR +Q+NA+ I T DQILN LVN++ Sbjct: 589 EEFTKMIVAQRGFQANARVITTADQILNELVNIK 622 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 80/326 (24%), Positives = 128/326 (39%), Gaps = 47/326 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++GL +DV+GNNI+N T GFK+ +F M A + Sbjct: 4 SLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSPQENVGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG +V+ I + T G+ NTG D+AI +GFF + D + S +Y+R G F LD Sbjct: 64 PMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGS-SYYYTRAGAFTLDS 122 Query: 105 NRNLV-NMQGLQLTGYPATGTPPT----IQQGANPTNISI-PNTLMAAKTTTTASMQINL 158 N NL+ G ++ G+ A P T I ++ I M AK T+ + NL Sbjct: 123 NGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEGNL 182 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--------NWQV 210 NS +T+ D G HD+ V+F KT + + + Sbjct: 183 NSKLGPG---------------SFVITLTDENGINHDVRVWFEKTQSDLGTDPFSSSQRY 227 Query: 211 YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNT 270 + D + A + FN G + + + + S + + Q Sbjct: 228 TMKIDIDNDGTADVDGYMVFNEFGRVEEAGVYAESQVITATTDGSISGSTALPDGTYQAI 287 Query: 271 GANNIVATTQNGYKPGDLVSYQINDD 296 ++ NG S+ IND Sbjct: 288 VLDSSGNVVYNGTTTVSGGSFTINDS 313 >UniRef50_Q9ZKY0 Flagellar hook protein flgE n=23 Tax=Helicobacteraceae RepID=FLGE_HELPJ Length = 718 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 13/258 (5%) Query: 158 LNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD 217 LN++ + S+S S+ V DS G H M + F ++G W Sbjct: 460 LNTASLIEGGASASSSKFTHATHATSIDVIDSLGTKHAMRIEFYRSGGAEWNFRVIVPEP 519 Query: 218 PNSIAKT--------ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----N 264 + + L FN +G+L P +L+F + Sbjct: 520 GELVGGSAARPNVFEGGRLHFNNDGSLAGMNPPLLQFDPKNGADAPQRINLAFGSSGSFD 579 Query: 265 SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 + + A QNGY+ GDL+ + + DG ++G +SN +T L Q+ LANFAN+ G Sbjct: 580 GLTSVDKISETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAG 639 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L + G NV+S T +SG AL+G A TG G+++ LE+SNVDLS+ L N+IV QR +Q+N Sbjct: 640 LQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQAN 699 Query: 385 AQTIKTQDQILNTLVNLR 402 ++ + T DQILNTL+NL+ Sbjct: 700 SKAVTTSDQILNTLLNLK 717 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 93/222 (41%), Gaps = 31/222 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + V+G+ A LD+ NNIAN T GFK ASF DM + K Sbjct: 4 SLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGLAGQ 63 Query: 48 ----VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKL 102 VGLGV V T+ F+ G NT D+AI +GFF + G ++R+G+F Sbjct: 64 NDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGEFLF 123 Query: 103 DENRNLVNMQGLQLTGYPATGTPP----------TIQQGANPTNISI-PNTLMAAKTTTT 151 D +LV GL + G+ G+ + NI I P +M A+ + Sbjct: 124 DSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARASNR 183 Query: 152 ASMQINLNSSDPLPTVTPFSASNADSYNKKGSVT-VFDSQGN 192 SM+ NLN+ A ++ + + V+DS N Sbjct: 184 ISMRANLNAGRHADQTAAVFALDSSAKTPSDGINPVYDSGTN 225 >UniRef50_A0RRQ1 Flagellar hook protein FlgE n=4 Tax=Proteobacteria RepID=A0RRQ1_CAMFF Length = 911 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 26/352 (7%) Query: 77 ISQNGFFRLVDSNGSVFYSRN---------GQFKLDENRNLVNMQGLQLTGYPATGTPPT 127 +++ G F + + G Y N G + + L P T Sbjct: 559 VNEKGQFVVKNPQGDAAYGENDSHLTVGAGGAVTPEGDNPLATTNPDGTVNVPVNNDTFT 618 Query: 128 IQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVF 187 + + + T + + ++SN + + ++ Sbjct: 619 NDYNMHLAITGLSDPNTNINENTKFTDVFSSLGGGLSTGTGEKTSSNIVMSSHAATTEIY 678 Query: 188 DSQGNAHDMSVYF-----VKTGDNNWQVYTQ-------DSSDPNSIAKTATTLEFNANGT 235 DS G+ H++ + F W + Q ++ A T+ F ++G+ Sbjct: 679 DSLGSKHEIKMEFRKISYSPENGTEWSMLIQVPEPGKINTETGEVANVIAGTVRFKSDGS 738 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVS 290 L+ + +N T A ++F N ++ N + Q+GY G L Sbjct: 739 LLGYSPSNLTFTANNGSAPGQNIEINFGKIGDYNGLRSNDNTSTTDNIVQDGYTAGTLNE 798 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 ++++ GT++G ++N ++ L Q+ LA F NNEGL S+G NV+ T +SG ++G+A T Sbjct: 799 LRVDESGTIIGAFTNGRSFGLAQVALAKFTNNEGLESDGGNVFVQTANSGAPVIGSAQTA 858 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +LE SNVDLS+ L +IV QR YQ+N++TI T DQ+LNTL+ L+ Sbjct: 859 GRGKINASSLEMSNVDLSRSLTQLIVVQRGYQANSKTITTGDQMLNTLLQLK 910 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 103/255 (40%), Gaps = 27/255 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A V+GL A +DV G+NIAN T GFK ASFAD+F+ + Sbjct: 4 ALWAGVTGLQAHQIAMDVEGDNIANVNTVGFKYSRASFADLFSQTAKVATAPQGDLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG ++ +T+ F G+ T + D+AI +GFF + G + Y+RNG F D Sbjct: 64 SMQIGLGTQINSVTKIFKQGSVQTTDKNTDLAIQGDGFFVVSPDGGKTYKYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ TI NI I P A+ TT ++ NLNS Sbjct: 124 SLGNFVDKNGYIVQGWLRNEDTGTIDPTGPVKNIQIEPGLSTPARATTEVALIGNLNSGS 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + T + S D GN D + Y D + Sbjct: 184 SIGTKSSPIYSLDSKNGW------LDKNGNGIWEDGETKNENDLSKNEYYVDKDKQVKVK 237 Query: 223 KTATTLE--FNANGT 235 +T L FNA G Sbjct: 238 ETGVDLGVLFNATGD 252 >UniRef50_Q1MQV7 Flagellar hook protein FlgE n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQV7_LAWIP Length = 690 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 84/417 (20%), Positives = 146/417 (35%), Gaps = 88/417 (21%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 VSGL + ++VIGNNIAN T GFK FAD +++G GV Sbjct: 6 GMWTGVSGLLSHGEKMNVIGNNIANVNTVGFKGQRMDFADFIYQDGFSTAGITQIGRGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNLVNMQ 112 + + +F G+ T D+AI GFF++ +Y+R G F+ + + LV+ Sbjct: 66 IGAVMGNFGQGSFETTTEATDLAIGGRGFFKVKPQGSETSYYTRAGNFRFNNDGYLVDPH 125 Query: 113 GLQLTGYPATG---------------TPPTIQQGANPTNISIPNTLMAAKTTTTASMQIN 157 G L G+ I PT+I + +A TT S +N Sbjct: 126 GYALQGWKIDNTEGPQRISGGVNPGTNTSQIMGTGEPTDIRLDTWTVAPLQTTNVSFNVN 185 Query: 158 LNSSDPLPTVTPFSASNADSYN---------------------KKGSVTVFDSQGNAHDM 196 L+S ++ +N + S+ V+D G H + Sbjct: 186 LSSDKSGDKSQNVNSPFTSLFNIWNGKQPSEPNNPPMPESAYSYQTSIKVYDEAGGTHTL 245 Query: 197 SVYFVKTGDNNWQ-----------VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNI 245 +VYF + +++ V T D S+ N + + M+ + Sbjct: 246 TVYFDQVSPKDYKGGGSGESVWEYVVTMDPSEDNRQVSVGGNIVDIKDTKAAGMLMSGTL 305 Query: 246 ATGAING-AEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 + + A + +SL+ + ++ NG + I+ DG Sbjct: 306 SFDSSGKLANQSAYSLNGSRKPAVDPATGALI----NGN------GFTIDRDGN------ 349 Query: 305 NEQTQLLGQIVLANFANNEGLASEGDNVW-SATQSSGVALLGTAGTGNFGTLTNGAL 360 I + N N +N + + ++G ++ TG G T G++ Sbjct: 350 --------AIPILNIDNPA------ENFYPAEVSNNGFPMIVANFTGVPGKNTAGSV 392 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 4/172 (2%) Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 NA +++ N+ A P S N+ G ++ + +QNGY GDL++ Sbjct: 522 NAASGILEANDPPNVKDLANMNGTPNRLS----NAFTNYAGGSSTKSASQNGYGFGDLMN 577 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 Y +N +G + G YSN L Q+ L +F + +GL EG N++S T+ SG G A T Sbjct: 578 YSVNAEGVLFGVYSNGVQLPLYQVALYDFNSKQGLRREGGNLFSQTRESGDPSSGAANTS 637 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG++ LE SNVD+S E V+MI QR +QSN++ + T DQ+L T+VN++ Sbjct: 638 GFGSINANTLEGSNVDISTEFVSMIATQRGFQSNSKIVTTIDQMLETVVNMK 689 >UniRef50_Q1N302 Flagellar hook protein FlgE n=3 Tax=Proteobacteria RepID=Q1N302_9GAMM Length = 1240 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 97/337 (28%), Positives = 146/337 (43%), Gaps = 47/337 (13%) Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G + G AT + G + T+ + + + F Sbjct: 905 NAGPVVLGGTATADTAAVVGGTIEFIFNEGYTISNPIPSVSGVFGALSEDEFEDYVLNVF 964 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--------DNNWQVYTQ----DSSDP 218 A + D+YN S T++DS GN+H M+ YFV+ +N W +Y Q D DP Sbjct: 965 DAQDQDTYNHATSTTIYDSLGNSHIMTQYFVREPLDPTRPNEENVWAMYVQIDGKDVGDP 1024 Query: 219 NSIAKTATTLE---------FNANGTLVDGAMANNIATGA-------------------- 249 +S LE FN +GT + T Sbjct: 1025 DSTLPFPDNLEPTQFRQELFFNPDGTFDQQSTGPIFVTNWDPVDEEGSPTGALKSQNVLE 1084 Query: 250 -----INGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 + + F + L Q ++ +QNGY G L +I+ DG + ++ Sbjct: 1085 GGLPLNDPPTNSNFEI-LLEDSSQFGSPFSVSEVSQNGYTTGRLTGLEIDADGFIFARFT 1143 Query: 305 NEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASN 364 N Q ++LGQ+ LA+F N EGL GD W + SG +G+ TG FG L + ALE SN Sbjct: 1144 NGQAEVLGQVALASFKNPEGLIPLGDTAWGESFESGTPTVGSPRTGTFGNLRSSALEDSN 1203 Query: 365 VDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 VDLS+ELV +I+AQRN+Q++A+TI+T D + T++ L Sbjct: 1204 VDLSEELVGLIIAQRNFQASAKTIETSDTVTQTIIQL 1240 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 113/275 (41%), Gaps = 21/275 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 MAF+ +SG+ AA+T+L+V GNN+AN++T GFK A FAD++ VG GV Sbjct: 1 MAFNIGLSGIRAASTDLEVTGNNVANASTVGFKESRAEFADVYTTTILGTGSKPVGSGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F+ G + T LD+AI NGFF L D NG+ Y+R G F LD++ +V G Sbjct: 61 VDNVRQEFSQGNISGTENALDMAIDGNGFFILND-NGTESYTRAGIFGLDKDGFVVANSG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L GY A G ++ I T+ S IN+++S+ + + Sbjct: 120 ARLQGYEANGDGVV---NGVLGDVQIRIGNQPPSLTSRVSSIINVDASELVKQELGSRLT 176 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD----------PNSIAK 223 + + DS G+ + D + A Sbjct: 177 SDGLAVAAPDAGIADSTSTVLSTVAQPTTAGNRTALTFDNGGVDLSAQANVVAQTDPGAF 236 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATF 258 T F+ G V A + GA Sbjct: 237 GVTIDPFDGTGAQVINIPAGTVTIGATPTQHLQNI 271 >UniRef50_B7IDJ5 Flagellar hook protein FlgE n=2 Tax=Thermosipho RepID=B7IDJ5_THEAB Length = 704 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 92/338 (27%), Positives = 142/338 (42%), Gaps = 38/338 (11%) Query: 100 FKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 F D N NLV G GT ++ NP+ + + Sbjct: 369 FVRDGNGNLV---GEYSLNNITNGTSYSLSGVFNPSGTYTIEVVREDTVNSVVVPGSGEP 425 Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV----------KTGDNNWQ 209 T F+ S +S SV V+D+ GNA+ + + FV T N W Sbjct: 426 RFYEADNPTNFAVSEFNSPFYTTSVQVYDTLGNAYTLYIDFVKLSANYYDGTDTFKNAWA 485 Query: 210 VYTQDSSDPNS------------IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPAT 257 +++S N + TA + F+ +G + G Sbjct: 486 FRVRNASGENIKYLSNYETGQEITSGTAGVMTFDESGRFTGIYAFDPSTGKVNRGESIDA 545 Query: 258 FSLS-------------FLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 L + Q ++ T QNG G L S+ I ++G ++G +S Sbjct: 546 IKFDAGENGDGEVKIKLNLTGITQFAATSDAYVTEQNGNAQGTLESFSIAENGDIIGTFS 605 Query: 305 NEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASN 364 N T LG++ LA F N GL G+++++ + +SG A++ G G G+L +GALE SN Sbjct: 606 NGLTDKLGKVALAIFNNPAGLLEAGNSLYTESANSGGAIIRQPGFGGSGSLISGALEMSN 665 Query: 365 VDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 VDLS+E +I+AQR +Q+NA+ + T DQIL +VNLR Sbjct: 666 VDLSEEFTKLIIAQRGFQANARVVTTADQILQEVVNLR 703 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 78/312 (25%), Positives = 129/312 (41%), Gaps = 50/312 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + V+GL +DV+GNNIAN +T GFK+ ++A F+ Sbjct: 4 SIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++G GVKVA I + + G+ NTG+ D+AI +GFF L D +G ++Y+R G F LD Sbjct: 64 PKQIGYGVKVASIDKIMSQGSFQNTGKKTDLAIQGDGFFILKDGSGKIYYTRAGNFDLDV 123 Query: 105 NRNLVN-MQGLQLTGYPATGTPPT----IQQGANPTNISI-PNTLMAAKTTTTASMQINL 158 N LV GL+L G+ A P + + ++I I MAAK T+ ++ NL Sbjct: 124 NGTLVQASSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTSYMTVANNL 183 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY------- 211 ++ K +T+ GN+ D+ + F + + + Sbjct: 184 DARVG---------------PSKTVMTLSGYGGNSVDVKILFDRESGALQEPFSDYQIYR 228 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 + S + ++F+ G +V + T N++QQ+ G Sbjct: 229 AKVYSGSDDSVDGEIYIKFDKFGNVVQSGAIKQSLSATATTDGSLTL-----NNIQQDDG 283 Query: 272 ANNIVATTQNGY 283 + NG Sbjct: 284 NYTFIIKDSNGS 295 >UniRef50_Q1JZT1 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZT1_DESAC Length = 548 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 88/312 (28%), Positives = 134/312 (42%), Gaps = 24/312 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + VSGLNA L V+GNNIANS T GFKS F+D+ + S+VG G Sbjct: 6 SLFSGVSGLNANGNALTVLGNNIANSNTIGFKSSRTIFSDLLSAEIAGSGGASQVGRGAG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 ++ + F+ GT T D+AI GFF + D S++Y+R G F DE LVN + Sbjct: 66 LSTVDNIFSQGTFETTESNTDLAIEGPGFFMVSDPGEASIYYTRAGAFNFDETGTLVNPE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G + GY T+ + T+++I + A TT S+ NLN++DP + Sbjct: 126 GYAVQGYYLNDAGETV---GDLTDLTIETRSFSPANPTTKISLATNLNANDPYLGTQGDA 182 Query: 172 AS------NADSYNKKGSVTVFDSQGNAHDMSVYF--VKTGDNNWQVYTQDSSDPNSIAK 223 S AD+ N SV +FDS G H ++ YF + +N V +S S ++ Sbjct: 183 VSPFDVNDPADTSNYASSVRIFDSLGREHLVTTYFNKLDPENNPDGVMQWESHTVVSESE 242 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 + + A+ ++ A A + A A N+ A Sbjct: 243 VESPAKIAADDAALELAKATEVTALADLTAAQTALDADPTNAALIAARDAAQTAYDA--- 299 Query: 284 KPGDLVSYQIND 295 L + +I+ Sbjct: 300 ANAALQTAEIDA 311 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 5/202 (2%) Query: 201 VKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSL 260 V D N V T +++DP+ TT + + + + + T ++ Sbjct: 351 VYDPDGNLYV-TSNTTDPDGNYYPLTT---DVDLKVPQPTASTVSGALSWINEAEDTQAV 406 Query: 261 SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 + Q + +++++ TQ+GY G LVS +++DG ++GNYSN + + L +I LA F+ Sbjct: 407 DIIFDATQYSSESDVISQTQDGYATGTLVSLTVDNDGNILGNYSNGEPRKLARIALAKFS 466 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 N GLA G+N++ AT SG A++GT G+ G + +LE SNVDL++E V MI QR Sbjct: 467 NPVGLAKAGNNLYEATDDSGTAIVGTVGS-GVGKIFTNSLEMSNVDLAQEFVKMITTQRG 525 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 +Q+N++ I T D++L L+NL+ Sbjct: 526 FQANSKIITTTDELLGELINLK 547 >UniRef50_Q2BQT8 Flagellar hook protein (FlgE)-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQT8_9GAMM Length = 634 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 113/239 (47%), Gaps = 13/239 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG--------LGVK 53 F+ AV+GL AA+T+LDVIGNNIANS+T GFK+ F D++A + VG GV Sbjct: 3 GFNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSGVT 62 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ I QDF GT T LD+AI+ +GFF+L D G ++R G F+LD++ +V+ G Sbjct: 63 VSDIAQDFQAGTIEFTNNNLDLAINGSGFFQLDDGQGGTTFTRAGAFQLDKDGFIVSKSG 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS-DPLPTVTPFSA 172 L GY + G N+++ K T + N++S DP P+ Sbjct: 123 KFLQGYGLDDQGNRLPIG----NLAVSQKESPPKATEDIDLSFNIDSREDPTTLTFPYDK 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 S+ +V FDS GN H + V+ +S I+ Sbjct: 179 DTPASFTYSTTVRTFDSLGNEHTIKYNMVERRPTKDVYSVTTASTAVRISGVTVDPTDG 237 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 82/255 (32%), Positives = 124/255 (48%), Gaps = 16/255 (6%) Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-TQDSSDPNS 220 + PT P S + + TV G +Y G + +D +P + Sbjct: 381 NINPTSYPISITPTGYTGMSLNSTVDGDNGFQGMYRLYAYLNGTELLDIGKVEDPGEPGA 440 Query: 221 IAKTATT----LEFNANGTLVDG----------AMANNIATGAINGAEPATFSLSFLNSM 266 A LEFN + L+ G + +GA T +L L Sbjct: 441 PAGNTEVGPILLEFNPSSGLLRGINDVTFTSGATAPSITVSGADPANNATTITLD-LTGT 499 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q A+ + ++TQ+GY GDL+ ++ G +V ++SN Q Q LG + +A F N GL Sbjct: 500 TQFASASIVKSSTQDGYTKGDLIGVSFSETGEMVASFSNGQNQDLGVVAIATFENQSGLQ 559 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 GD W+AT +SG A++ GTG GTL + ALE SNVDLS ELV +I AQRN+Q+N++ Sbjct: 560 PSGDTEWTATLTSGDAIVNPPGTGLNGTLRSAALEQSNVDLSAELVALIEAQRNFQANSK 619 Query: 387 TIKTQDQILNTLVNL 401 TI+TQ+ + ++ + Sbjct: 620 TIETQNTVTQAILQI 634 >UniRef50_C0QAJ6 FlgE n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAJ6_DESAH Length = 901 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 24/276 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + SGL + V+GNNI+N T GFK G ++FAD + S +VG G+ Sbjct: 6 SLFTGTSGLTNMGNAMQVVGNNISNVNTVGFKKGRSTFADTLSQSVATQSGTDQVGRGMS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQ 112 + + Q F G+ +TG D++I +GFF + SN FY+R G F D++ LVN + Sbjct: 66 IGAVDQSFDTGSFESTGNSTDLSIGGDGFFVVRQSNSENNFYTRAGNFHFDKSGQLVNPE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 + G+ T + +I + + K ++T SM NL+S TV ++ Sbjct: 126 SYLVQGWALD--EDTGEDIGAINDIVLNAFTSSPKQSSTVSMITNLDSDAESQTVVLSNS 183 Query: 173 S--------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ-VYTQDSSDPNSIAK 223 ++ +Y + V V+D+ G+ HD++VY+ K +W+ V T D S+ N Sbjct: 184 WDSGETTYMDSTNYEYQSVVKVYDALGSTHDVTVYYDKKTGTDWEYVVTCDPSEDNRNLV 243 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 +T ++ G L G ++ + ++G I F+ Sbjct: 244 EST----DSKGLLARGTISFSESSGDILKVTMEEFT 275 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 6/205 (2%) Query: 198 VYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPAT 257 + F G W+ + D D T G + +I + Sbjct: 703 ITFDILGSTAWREQSVDEIDKTGYFAFNTDFLGGEFG-----STEFSIELDIGTRYDGIN 757 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 F ++ S Q ++N V +GY GDL + DG + G YSN Q L ++ LA Sbjct: 758 F-INDSLSSTQYARSSNTVYQDADGYSAGDLQGVDVASDGIMTGVYSNGQLIPLFRVGLA 816 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 F NN GL++ G N++S T+ SG A+ G GT++ +LE SNVD+S+E V MI Sbjct: 817 KFLNNNGLSNSGGNLFSETRDSGSAITNKPGENGLGTISPNSLEMSNVDISEEFVKMITT 876 Query: 378 QRNYQSNAQTIKTQDQILNTLVNLR 402 QR +Q+N++TI T D+++ T++N++ Sbjct: 877 QRGFQANSKTITTVDEMMQTVINMK 901 >UniRef50_B8CYR1 Flagellar hook protein FlgE, epsilon proteobacterial n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYR1_HALOH Length = 519 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 8/225 (3%) Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA-TTLEFNANGTLV 237 G++T FD G + N W D +D N A A T+ FN +GT+ Sbjct: 301 TTTGAMTDFDGAGA-----ITLSNPPSNTWDWNLVDVTDANLPASPASGTITFNPDGTIN 355 Query: 238 DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 G+ + A T +L F Q G + +GY+ G L + I+D G Sbjct: 356 SGSNGSIAFDPTNGAATGQTINLDFSALTQLAEGFDF--KINSDGYETGALEGFTIDDGG 413 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 + G+YSN + +GQI +A F N GL EG+ ++S +++SG +G AG+G G ++ Sbjct: 414 VITGSYSNGLVRPIGQIAIAYFVNPSGLMKEGETLFSPSENSGDPQIGEAGSGGRGKISV 473 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G LE SNVDL+++ +MI QR +Q+N++ I T DQ+L LVNL+ Sbjct: 474 GNLEMSNVDLAEQFTDMITTQRGFQANSKIITTTDQMLQDLVNLK 518 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 103/397 (25%), Positives = 160/397 (40%), Gaps = 46/397 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A T +DVIGNNIAN T G+KS + +F +M + + Sbjct: 4 SMYAGVSGLKAHQTRMDVIGNNIANVNTVGYKSSSVTFKEMLSQTLRGAKAPQGGRGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV V IT D T G TG D+AI NG+F + + + ++R G+ LD+ Sbjct: 64 PMQVGLGVGVGSITVDHTQGNLQPTGVTTDLAIQGNGYFVVNNGQKN-LFTRAGRLNLDD 122 Query: 105 NRNLVN-MQGLQLTGYPATGTPPTIQQGANPTNISIPN--TLMAAKTTTTASMQINLNSS 161 N LVN G + G+ A + TI G +P NI I + ++M A+ T A++ NL+S Sbjct: 123 NGYLVNVSNGFVIQGWMADISTGTINSGQDPENIHITDEYSIMNARATGNATISGNLDSQ 182 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 ++ +V V DS G H +++ F K ++ T + Sbjct: 183 FGG--------------TREITVDVLDSLGEMHTVTLSFTKRVP---ELTTTIGGWDLNF 225 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA-NNIVATTQ 280 T + N + I +G T + + NS I Sbjct: 226 RATEPDINLNNLTIDFLADDDSQINASYNSGTNTVTVAADWDNSSTNAPADLEAIENAIN 285 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE---GLASEGDNVWSATQ 337 + L S I T + G I L+N +N L D A+ Sbjct: 286 DALNANGLASVDITATTTGAMTDFDG----AGAITLSNPPSNTWDWNLVDVTDANLPASP 341 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 +SG GT N G+ + A + +N + + +N+ Sbjct: 342 ASGTITFNPDGTINSGSNGSIAFDPTNGAATGQTINL 378 >UniRef50_A7GVS8 Flagellar hook protein FlgE n=2 Tax=Campylobacter RepID=A7GVS8_CAMC5 Length = 819 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 96/315 (30%), Positives = 151/315 (47%), Gaps = 21/315 (6%) Query: 109 VNMQGLQLTGYPATG--TPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT 166 VN G P+ G T + ++ A + + + + D + Sbjct: 504 VNNAGQYQLENPSNGEFDKALYMTTTGLTTEATGSSNANAAVSENVRLTTIMKALDGALS 563 Query: 167 VTPFSASNADSYNKKGSVT--VFDSQGNAHDMSVYFVKTGDNN-----WQVYTQ------ 213 ++ T ++DS G+ H +S+ + KTG N W + Q Sbjct: 564 PGQALRNSGKLMMSSHGSTAEIYDSLGSKHTVSIKWAKTGTTNDGGTEWSMIIQVPEPAK 623 Query: 214 -DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQ 267 + S +L FNANG+L A T SL+F N + Sbjct: 624 INYSGEGPDNVITGSLRFNANGSLASFHPATFTFTANNGSQAGQNVSLNFGLGTDFNGLT 683 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 ++ + +Q+GY G L +I++ GT++G ++N ++ L Q+ LA F NNEGL S Sbjct: 684 SFDKDSSTESISQDGYTGGTLRDIKIDETGTIIGAFTNGKSFGLAQVALATFTNNEGLQS 743 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 EG NV+S T +SG A++G AGTG+ GT+ LEASNVDLS+ L ++IV QR +Q+N++T Sbjct: 744 EGGNVFSQTANSGEAVIGAAGTGDKGTVAASKLEASNVDLSRALTDLIVIQRGFQANSKT 803 Query: 388 IKTQDQILNTLVNLR 402 I T D++LNTL+ L+ Sbjct: 804 ITTSDEMLNTLLQLK 818 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 24/299 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNIAN TYG+K A+FAD+ + + Sbjct: 4 SLWSGVSGLQAHQIAMDVEGNNIANVNTYGYKYNRANFADILSQTPRVATAPQGELGGQN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLD 103 ++GLG + T+ F+ GT T+T + D+A+ NGFF + G+ +Y+RNG F D Sbjct: 64 PMQIGLGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFIVSPDGGTTRYYTRNGDFVRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 + N VN G + G+ TI NI I A+ TT ++ NL+S + Sbjct: 124 KAGNFVNNSGHIVQGWTRDEETGTIDSTGPIKNIVIKEGLTTPARATTEVKIKGNLDSGN 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + + S + +++ G + + +NN + + Sbjct: 184 TIGARSTPIYS----LDSVAGGRDYNNNGIKDNGEDHLENDVNNNQFYTNSKNEQVLTER 239 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 + ++ G + I + A+ F + N+ T + Sbjct: 240 GVDLGVLYDELGNGLALRNNQGI-WVSYANAKSTPFDIGDAPGGTTTGQINSPTGATLD 297 >UniRef50_D2C6I0 Fagellar hook-basal body protein n=3 Tax=Thermotoga RepID=D2C6I0_THENR Length = 755 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 33/334 (9%) Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 LD + N+V ++G T I G N T I + + T ++ + +S Sbjct: 421 LDSSGNVVYNGTTTVSGGSFTINDSDITAGNNYTVILLTPNNASNSLTIAPGAELVIPTS 480 Query: 162 DPLPTVTPFSAS-----NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN--------- 207 + + + S +V V+DS GNA+ + FV+ G+ Sbjct: 481 GEPRFYESDNPTNFVQTDYTSPRYTTAVQVYDSLGNAYTVYYEFVRLGNTTIGSESFKNA 540 Query: 208 --WQVYTQDS------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 W+ YT + A ++F+ +G + ++ + F Sbjct: 541 WIWRAYTDSGEPISLIDEDGGSGYVAGLIDFDESGRPIQYRGLDSSYNLSSGEVRTIQFD 600 Query: 260 LSFLN-----------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 Q +G + + Q+G G L S+ IN+ G ++G +SN T Sbjct: 601 AGQSGDGVVTITADFSGATQFSGDSTLNIPWQDGNPMGVLESFAINEQGEIIGTFSNGLT 660 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 +LGQI LA F N GL+ G++++ + +SGV +G G+G G L GALE SNVDL+ Sbjct: 661 DVLGQIALAVFNNPSGLSEVGNSLYVVSANSGVPKIGAPGSGGRGILIPGALEMSNVDLA 720 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +E MIVAQR +Q+NA+ I T DQILN LVN++ Sbjct: 721 EEFTKMIVAQRGFQANARVITTADQILNELVNIK 754 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 84/360 (23%), Positives = 141/360 (39%), Gaps = 58/360 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++GL +DV+GNNI+N T GFK+ +F M A + Sbjct: 4 SLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG +V+ I + T G+ NTG D+AI +GFF + D + S +Y+R G F LD Sbjct: 64 PMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGS-SYYYTRAGAFTLDS 122 Query: 105 NRNLV-NMQGLQLTGYPATGTPPT----IQQGANPTNISI-PNTLMAAKTTTTASMQINL 158 N NL+ G ++ G+ A P T I ++ I M AK T+ + NL Sbjct: 123 NGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEGNL 182 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--------NWQV 210 NS +T+ D G HD+ V+F KT + + + Sbjct: 183 NSKLGPG---------------SFVITLTDENGINHDVRVWFEKTQSDLGTDPFSSSQRY 227 Query: 211 YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNT 270 + D + A + FN G + + + T A + + + + Q Sbjct: 228 TMKIDIDNDGTADVDGYMVFNEFGRVEEAGVYAESQTMT---AIGISGTTTLSDGTYQTI 284 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 ++ NG S+ I+D V GN ++L + + + + + Sbjct: 285 VLDSSGNVVYNGTTTVSSGSFTISDPDIVSGN--------NYTVILYSADDTRNVTASSN 336 >UniRef50_B2A353 Putative uncharacterized protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A353_NATTJ Length = 508 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 75/333 (22%), Positives = 127/333 (38%), Gaps = 43/333 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T LD IGNN+AN T GFK +F D F + Sbjct: 4 SMYSGVSGLRNHQTRLDTIGNNVANVNTAGFKGDRVTFQDAFNQTLEAASAPNERGGTNP 63 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN 105 +VGLG+ + + T G+ NTGR D+AI +GFF + D + ++R G F +D Sbjct: 64 QQVGLGMNIGSMDTIHTQGSLENTGRDTDLAIEGDGFFVVNDGQSDM-FTRVGNFGVDSE 122 Query: 106 RNLVNM-QGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 NLV+ G ++ GY I ++ IP ++ + T NLNS+ Sbjct: 123 GNLVSQGTGYKVQGYAYDEDADEIN-TDEIVDMEIPLGDVVDPEATENVKYNGNLNSNTE 181 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 +V VFD+ G+ H +++ F ++G+N WQ+ + + + Sbjct: 182 PGETV------------STTVNVFDNLGSEHTLNLEFEESGENEWQMTVRKDG---ILIE 226 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 + F+ +G L + A F NG+ Sbjct: 227 DEIQVSFSDDGELTSVGDEGTSYSINDFEATVQ----DFGGLSDSAKEDLGFDIDDDNGH 282 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 ++ + +D N + + + + + Sbjct: 283 DEDNIQGMLMRND----VQAGNAEAEDVAALAI 311 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 4/198 (2%) Query: 205 DNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN 264 + ++ Y D + +S+ + + + + T D N+ +N F L Sbjct: 314 EGRYEWYHPDDINFDSLEEGDYSPDVDPIFT-QDQEPQNDEEVDLLNAPGGIEFDL---G 369 Query: 265 SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 ++Q G + + ++G G+L +Y+++ G + G Y+N +T+ LGQ+VL++F N G Sbjct: 370 DVRQVAGESTVEGVAEDGQAQGELETYEVDSAGIITGTYTNGETRQLGQVVLSDFTNPGG 429 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L G ++ T++SG G AGTG G + GALE SNVD+ ++ +MIV QR +Q+N Sbjct: 430 LEKLGSGLYQPTRNSGEPSYGIAGTGGRGEIAPGALEMSNVDMGEQFTDMIVTQRGFQAN 489 Query: 385 AQTIKTQDQILNTLVNLR 402 +++I T D++L LVNL+ Sbjct: 490 SRSITTGDEVLQELVNLK 507 >UniRef50_A4BEL5 Flagellar hook protein FlgE n=2 Tax=cellular organisms RepID=A4BEL5_9GAMM Length = 1472 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 104/349 (29%), Positives = 154/349 (44%), Gaps = 58/349 (16%) Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPN----------TLMAAKTTTTASMQINLNS 160 GL + GY T + TN I T+ S Sbjct: 1125 QDGLTVQGYTGTPPVTLGRGADAETNARIGGYVDIVLNEGYTMTEPDPRVAGLFNGLTES 1184 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--------NNWQVYT 212 S + F+ + ++YN+ S+TV+DS GN H + +++VK + N+W VY Sbjct: 1185 SFEEYVINEFNPDDPETYNESASLTVYDSLGNQHRLQLFYVKDPEDPARPQALNSWTVYA 1244 Query: 213 QDSSDPNSIAKTA-------------TTLEFNANGTL----------------------- 236 Q + + L FNA+GTL Sbjct: 1245 QIDGENVGDPDASLPFPENIEPTYAEFKLYFNADGTLDEENTGEWLISNWDPVDENGDSN 1304 Query: 237 ---VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 +A + + + FS+SF Q G Q+GY G L +I Sbjct: 1305 GAYTSLNVAEGGSLPIPDPNTNSNFSVSF-GGTTQYGGPFARYNFQQDGYASGRLKDLEI 1363 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 +DDGT+ Y+N + Q+LGQ+ LA+FAN EGL G W + SG A +G GTG G Sbjct: 1364 DDDGTIYARYTNGEAQVLGQVALASFANMEGLNPVGQTEWQESFESGDATIGEPGTGLLG 1423 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 TL + ALE S VDLS++LV++I+AQRNYQ++A+TI+T + + T++NLR Sbjct: 1424 TLQSAALEDSTVDLSEQLVHLIIAQRNYQASAKTIETANAVTQTIINLR 1472 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 110/288 (38%), Gaps = 33/288 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F +SG+ AA +L + GNNIAN++T GFK+ A F D + S +G GV Sbjct: 1 MSFGSGLSGVAAANKDLKITGNNIANASTTGFKASRAEFGDAYTTSILGMGQDPIGSGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F G + T LD+AI NGFF N SV Y+R+G F +D++ +V+ QG Sbjct: 61 VNNVGQKFEQGNISQTNSVLDLAIDGNGFFVTEYPNNSVTYTRSGIFGIDKDGYIVSNQG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L G+ T++ + + T Q+N+ + Sbjct: 121 ATLQGFGVNENGIV---SGILTDLRVDAGSQPPRGTHGVEAQVNVPAGAN---------- 167 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 V S G+ + V T + P I T T Sbjct: 168 ------------VLQSIGSTTRTTGLAVGVAQVGPAQDTTTTLTPIGIPTTEGTASQIVG 215 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSF-LNSMQQNTGANNIVATTQ 280 G + I A+ ++ F L N G + + AT Q Sbjct: 216 GPIGFSGTVPGINFPWQPNTSQASSTIDFTLQGPNINGGLSPLTATVQ 263 >UniRef50_Q72C41 Flagellar hook protein FlgE n=3 Tax=Desulfovibrio vulgaris RepID=Q72C41_DESVH Length = 564 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 115/312 (36%), Gaps = 55/312 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL A ++V+GNNIAN T GFK F D ++VG GV Sbjct: 6 SMWTGVSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQVGRGVS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-DSNGSVFYSRNGQFKLDENRNLVNMQ 112 + I D++ G T D+AI GFF + +Y+R G F+ D + LV+ Sbjct: 66 IGAIFGDYSQGAFQTTNESTDLAIQGRGFFSVKPKGTEDTYYTRAGNFRFDADGYLVDPH 125 Query: 113 GLQLTGYP--------------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL 158 G L G+ AT T I+ P +I + + T ++ +NL Sbjct: 126 GYVLQGWAIERSQNSLTSSAVTATSTTSKIKGSGVPVDIKLDGFTAEPQHTQNITLNVNL 185 Query: 159 NS---------------------SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMS 197 +S + P A ++ + ++ V+D G AH ++ Sbjct: 186 DSNPGNDKSSSTTNPYFSLFETWNGQNPLTGTQPALAQSAFAYQSTIKVYDEAGTAHTLT 245 Query: 198 VYFVKTGDNNWQ-----------VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIA 246 VYF + ++ + T D ++ + A G L+ G + + Sbjct: 246 VYFDQVDPDSVTNEPNGRKQWEYIVTMDPAEDKRVIAGTAMNTTRAAGLLMTGTLTFDTT 305 Query: 247 TGAINGAEPATF 258 ++ F Sbjct: 306 GQLVDQTAFTPF 317 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 12/214 (5%) Query: 201 VKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSL 260 + N + + S + + N L G + N T + A Sbjct: 350 TQMSSNGLPMMVANFSGLTDSSVVGSPTAQNFLMELDLGLRSTNATTPWTSTPNAAAIGT 409 Query: 261 SFL------------NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 ++ G+++ Q+GY G L + ++ DG + G YSN T Sbjct: 410 DASLLPGLTSSQRQPSATTSYAGSSSTQFQKQDGYTFGFLQNITVDRDGIMQGKYSNGVT 469 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 L Q+ L +F + + L EG N++S T+ SG L G A + G +++ +LE SNVDL+ Sbjct: 470 LDLYQVTLVDFTSKQNLRREGGNLFSGTRDSGDPLPGPANSNGLGAISSNSLEQSNVDLA 529 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +E V MI QR +QSN++ I T D +L +VN++ Sbjct: 530 REFVEMITTQRGFQSNSKVITTTDTMLEVVVNMK 563 >UniRef50_C7LRK3 Putative uncharacterized protein n=2 Tax=Desulfovibrionales RepID=C7LRK3_DESBD Length = 562 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 49/329 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + SGL A ++ VIGNNI+N +T GFK F D + +VG GV Sbjct: 6 SLYSGTSGLKAHGEDMTVIGNNISNVSTIGFKGSRMYFEDALSQQITTASGSGQVGRGVS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNLVNMQ 112 V + DF+ G+ +T D+AI NGFF + + V +Y+R G F+ DE LV+ + Sbjct: 66 VGTVMGDFSQGSLESTTEATDLAIGGNGFFMVSPAGQEVNYYTRAGNFRFDEEGYLVDPR 125 Query: 113 GLQLTGYPATGTPPTIQQGAN--------------PTNISIPNTLMAAKTTTTASMQINL 158 G +L G+ + + P ++ + N + T+ + +N+ Sbjct: 126 GYRLQGWEVQQANTSAAASGDTTAQATTGVQILGVPQDVKLENFQSPPQATSRVDLILNV 185 Query: 159 NSSDPLPTVTPFSASNA---------------DSYNKKGSVTVFDSQGNAHDMSVYFVKT 203 +SS +V+P A SY + ++ V+D G++H+M+VY Sbjct: 186 DSSSEDKSVSPTDPFTALFDTYDATAAEPIGEASYAYQTTIKVYDENGSSHNMTVYMDPV 245 Query: 204 GDNNWQ--------VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEP 255 + + P + G L+ G + N A N + Sbjct: 246 ANVEVTGAAAGKRYWEYIIAVPPGEDNRDFWGAGDEKRGILMSGTLTFNAAGELENMS-- 303 Query: 256 ATFSLSFLNSMQQNTGANNIVATTQNGYK 284 F+++ L + + + +QNGY Sbjct: 304 -AFTVNDLTADPELPASWVPANFSQNGYP 331 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 6/244 (2%) Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 N S + + A + + GS + +S+ + + V+ ++W+ Sbjct: 324 NFSQNGYPICTANFLGAANGSTTGSGILAESENTKNIEINFGVRNKTSSWEPGPAIPPAA 383 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 + T+ + A+ +S L+S +TG+ I Sbjct: 384 ATGQDNLGDYP-----TIDTSGATPVLVGSLGAINGFASTEISALSSTNYSTGSTTIFQA 438 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 Q+GY G L + ++ DG + G YSN Q L + LA F NN L EG N++S T+S Sbjct: 439 -QDGYTAGFLQNISVDRDGVITGRYSNGQVLQLFAVTLATFNNNYALYREGGNLFSETRS 497 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG + G A TG G++ + +LE SNVDL+ E V MI ++ +Q+N++TI T DQ+L L Sbjct: 498 SGPPITGLANTGGKGSIASNSLEQSNVDLATEFVKMITTEKGFQANSKTITTVDQMLTVL 557 Query: 399 VNLR 402 + L+ Sbjct: 558 IQLK 561 >UniRef50_A7HN97 Putative uncharacterized protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN97_FERNB Length = 770 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 35/256 (13%) Query: 180 KKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVYTQDSSDPNS------------I 221 S V+DS GN + + + FVK +N W + +S N Sbjct: 516 YTTSTQVYDSLGNPYTLYIDFVKLASVYGNHENAWAFRIRSASGENIKYLSNYDTATEIT 575 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPAT---------------FSLSFLNSM 266 T L F+ G L+ G + + +TG I+ E L LNSM Sbjct: 576 GGTCGVLRFDKTGRLL-GVNSFDPSTGRISEGENVDAILFNAGENGDGIVKIKLD-LNSM 633 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q + Q+G G L S+ I+++G ++G+++N +LG++ LA F N GL Sbjct: 634 TQFAALADAFVKNQDGNAQGVLESFSISENGDIIGSFTNGLVDVLGKVALATFNNPAGLL 693 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 G++++ + +SG A +G G FG+L GALE SNVDLS+E +I+AQR +Q+NA+ Sbjct: 694 ELGNSLYGESANSGTARIGQPSKGGFGSLVAGALEMSNVDLSEEFTKLIIAQRGFQANAR 753 Query: 387 TIKTQDQILNTLVNLR 402 TI T DQIL +VNLR Sbjct: 754 TITTADQILQEVVNLR 769 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 123/318 (38%), Gaps = 51/318 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL +DV+ NNI+N T GFK ++A F+ Sbjct: 4 SLYSGVSGLQGFQQEIDVVSNNISNVNTIGFKGARVTYATNFSQILDMSRRATDNTGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++G G++VA I + G+ NTG+ D+AI GFF L + F++R G F LD Sbjct: 64 PKQIGYGIRVASIDKIMNQGSFQNTGKKTDLAIQGEGFFILSNGQ-RQFFTRAGNFDLDL 122 Query: 105 NRNLVNM-QGLQLTGYPATGTPPT----IQQGANPTNISIPNTL-MAAKTTTTASMQINL 158 N +V GL+L G+ A P + + +NI I + L MAAK TT +M NL Sbjct: 123 NGTIVQPTTGLKLQGWVAEVDPMSGRRYVDTNKPISNIQISSGLSMAAKQTTRMTMAGNL 182 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ----- 213 ++ K + + G + V F + ++ Sbjct: 183 DARVGPE---------------KFVIAINGYGGRTINTKVSFERDFGALQDTFSDYQVYL 227 Query: 214 --DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 ++ + ++F+ G +V+ +G +G L+ N +QQ G Sbjct: 228 GKIDANLDDKVDGKVYIKFDKFGNVVNAGAIKQKLSGTASGGA-----LTLTNPIQQQDG 282 Query: 272 ANNIVATTQNGYKPGDLV 289 + NG L Sbjct: 283 NYLFIIRDSNGKIVDTLS 300 >UniRef50_C5V017 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V017_9PROT Length = 498 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 99/282 (35%), Positives = 141/282 (50%), Gaps = 10/282 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLN A+ +LD IGNN+AN++T GFK A FADMFA S +G G K Sbjct: 1 MSFQQGLSGLNGASRHLDTIGNNVANASTVGFKQSQAQFADMFAASLSGSGAMPIGTGTK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + Q FT G TNT LD AIS GFFRL D+ G+V YSRNGQF++D+ N+VN QG Sbjct: 61 LVAVAQQFTQGNITNTNNPLDTAISGQGFFRLTDAAGAVLYSRNGQFQVDKTGNVVNNQG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++GY A ++Q + I +T +A TTT ++ NL+S +P FS Sbjct: 121 HIVSGYLADAAGTIVKQT---VPLKITSTNLAPVMTTTTTVGANLDSRAAVPATAAFSTI 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + SY S++VFDS G +H ++YF + + ++D + L Sbjct: 178 DPTSYTSSTSLSVFDSLGASHVGTMYFARQPIATVGNGSFAAADTVMTVGSTVGLAVGNT 237 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 TL T A A + + +N+ Sbjct: 238 VTLAGTTYTITGVTNATTLAVTPAAAGVVAAAAATTNAPSNL 279 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 129/288 (44%), Gaps = 5/288 (1%) Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADS 177 G + T+ + +++ NT+ A TT T + N ++ T A + Sbjct: 213 GNGSFAAADTVMTVGSTVGLAVGNTVTLAGTTYTITGVTN--ATTLAVTPAAAGVVAAAA 270 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 ++++ ++ V + + P T T + G + Sbjct: 271 ATTNAPSNLWNTYLTIDNVLVPPIVAPATTATPFATLGFSPTGTLSTLTAGAGSTAGATL 330 Query: 238 DGAMANNIATGAINGAEPATFSLSFLN---SMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 + + P T + F + Q G + TQNGY G L S Sbjct: 331 GKVTTPSFNPVSTITTSPQTITFDFNSLAAGTTQFGGNFGVNTLTQNGYTSGQLNSTSTG 390 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 DGT++G YSN Q++ LGQI L NF N +GL G+N W T +SG GT G+ + G Sbjct: 391 TDGTILGRYSNGQSRALGQITLTNFINPQGLQPVGNNEWVETSASGSPTTGTPGSSSLGM 450 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L A E SNVDL+ ELVNMI AQR YQ+NAQTIKTQD +L T+ +LR Sbjct: 451 LQASATEDSNVDLTAELVNMITAQRVYQANAQTIKTQDSLLQTITSLR 498 >UniRef50_C6RJ18 Flagellar hook protein FlgE n=1 Tax=Campylobacter showae RM3277 RepID=C6RJ18_9PROT Length = 756 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 25/313 (7%) Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKT-TTTASMQINLN--SSDPL 164 +VN G GA NI++ A K T ++ S Sbjct: 451 IVNEHGQY-------QFKNPSAAGAKDMNIAVTGLTNATKNVTENVKFTASMAPISGSLS 503 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDSSDPNS 220 + + S ++DS G H++ + F+K G ++PNS Sbjct: 504 AGGATRVTDSLNMAAHSSSTDLYDSLGTKHNVKMDFIKRGYTENGGTEWTMVIQVAEPNS 563 Query: 221 IAKT------ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF-----LNSMQQN 269 I + FN +G+L + A+ A L F + + Sbjct: 564 INTVEPRNVVTGYVRFNPDGSLATYSPASITFGAQNGSAIGQNIELKFGTTQTTDGLTST 623 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 ++ +Q+GY G+L +I+ GT+VG+++N ++ L Q+ +A FANN+GLA EG Sbjct: 624 DNNSSTADISQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFANNQGLAGEG 683 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 N++S T +SG ++G A T G ++ +LE SNVDLS+ L +IV QR +Q+N++TI Sbjct: 684 GNLFSRTANSGDPIIGAAQTAGRGKISASSLEMSNVDLSRSLTQLIVVQRGFQANSKTIT 743 Query: 390 TQDQILNTLVNLR 402 T D++LNTL+ L+ Sbjct: 744 TSDEMLNTLLQLK 756 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 121/327 (37%), Gaps = 28/327 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+GL A +DV GNNIAN T G+K A+F D+ + Sbjct: 4 SLWSGVTGLQAHQIAMDVEGNNIANVNTVGYKYNRANFDDLIYQTSRIATAPQNQHGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 +VGLG ++ T+ F G+ T + D+A+ +GFF + G + +Y+RNG F D Sbjct: 64 NMEVGLGTQINSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSSDGGKTTYYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ I +I IP + A+ TT +++ NL+S + Sbjct: 124 SEGNFVDNGGNIVQGWMRDEETGEIDPTRPIGDIKIPVGLTVPARATTNIALKGNLDSGN 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + +N D+ G V+ N ++ + Sbjct: 184 DVGNKKIPIYKLDQHHNGVD----LDNDGTIAGSEVHDENNVGANRFYVNKNGEQRMTER 239 Query: 223 KTATTLEFNANGTLVDGAMANNIA----TGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 + FN+NG + A + A+ +++ + + + Sbjct: 240 GADLGVLFNSNGDAYNLRDAQGTGGQGIWASYADAKTDGLTVAGVGADGSFAAPGKKLNI 299 Query: 279 TQNGYKPGDLVSYQIND-DGTVVGNYS 304 T NG I G + G YS Sbjct: 300 TLNGKNITGENILTIGQLAGIINGKYS 326 >UniRef50_Q2SDU1 Flagellar hook protein FlgE n=3 Tax=Gammaproteobacteria RepID=Q2SDU1_HAHCH Length = 651 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 160/334 (47%), Gaps = 49/334 (14%) Query: 114 LQLTGYPATGTPPTIQQG------ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 + G A T T+ N++I + + A TT + Sbjct: 322 FLVQGDDAAATSQTLSTALTDVVVGGGVNLTIQDGVTVASGTTDLFATF----TGTPFVN 377 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVYT----QDSSD 217 F ++ ++YN S T++DS GN+H ++ +FVK T DN W +Y QD D Sbjct: 378 NVFDPADENTYNHATSTTIYDSLGNSHVLTTFFVKEPQTATTPDNLWTMYALIDGQDIGD 437 Query: 218 PNSIAKTAT----TLEFNANG---------------TLVDGAMANNIATGAINGAEPATF 258 P T T +L F+ +G T + N A G +N A+ T Sbjct: 438 PLVTGGTPTRASYSLVFDQDGSINEVLSDDVLISNWTPLAPDGTPNGAEGPLNVADGGTL 497 Query: 259 SLSF----------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 + L + Q A + QNG+ G L+ ++D G + Y+N ++ Sbjct: 498 PIPDPPTSSNFFVDLGTTTQYGSAFAVNDLQQNGFTTGRLIGLDVDDGGVIFARYTNGES 557 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 ++LGQ+ LANF + +GLA G+ W T +SG ++G+ GT + G + + +LE SNVDLS Sbjct: 558 KVLGQVALANFNDIQGLAPVGETTWVETFNSGNPVIGSPGTASLGAIRSSSLEDSNVDLS 617 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++LV +I+AQRNYQ+NA+TI+T + I T++NLR Sbjct: 618 EQLVGLIIAQRNYQANAKTIETANAITQTIINLR 651 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 28/253 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F+ A++G+ AA+ +L+V GNNIAN++T GFK A F D++A S VG GV+ Sbjct: 1 MPFNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGDGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F G + T GLD+AI+ GFF L +NG YSR G F +D+ N+VN G Sbjct: 61 VQKVRQEFAQGNLSFTENGLDLAINGEGFFILDTNNGDRRYSRAGAFGIDKEGNVVNSSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS-- 171 + L G+ A + ++ I +T +A TT +NL++S+P+ S Sbjct: 121 MHLQGFVANDSGVV---SGVLGDLVIDDTSLAPDRTTRVDANLNLDASEPVLLERGDSLT 177 Query: 172 ---------------ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS 216 +N + ++TV + G+ +++ + N + Sbjct: 178 SDGLLIGQAVDATAAGTNGANGYAAQTITVTQADGSTSTVTIP-ANSSANEIAALFNNVD 236 Query: 217 DPNSIAKTATTLE 229 + ++ A T T+ Sbjct: 237 NIDAAASTRATIT 249 >UniRef50_Q30UL8 Flagellar hook FlgE n=2 Tax=Campylobacterales RepID=Q30UL8_SULDN Length = 718 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 19/312 (6%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQIN---LNSSDPLP 165 +N QG P + T ++ N++ T N LN++ P Sbjct: 407 INAQGKFELSNPGGSQDGDYDINLSITGMN-ANSITGGGITENTKFTRNMEALNATLPAG 465 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF-------VKTGDNNWQVYTQDSSDP 218 + + + ++ S+ +FDS G+ H + F N ++ + + Sbjct: 466 STGKAFSQSFNAATHSASIDIFDSLGSKHTLRTEFRKVAVDASTGSSWNMKISVPEPATI 525 Query: 219 NSIAK---TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSL-----SFLNSMQQNT 270 +S+A + FN++G+L N T A ++ + + M Sbjct: 526 DSVAPYNEKTGFVRFNSDGSLATFNPPNVSFTANNGSAANQQVAIKLGTSNSFDGMTSFD 585 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + +Q+G+ GDLV +I+ GT++G++SN ++ L QI +A F NNEGL++EG Sbjct: 586 SKSATSGISQDGFTGGDLVGIRIDQSGTLIGSFSNGRSFGLAQIGMAKFTNNEGLSTEGG 645 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 NV+ T +SG ++GTA T G + ALEASNVDLS L +I+ QR YQ+N +TI T Sbjct: 646 NVYVQTANSGDPIIGTAATAGRGFMQAAALEASNVDLSLALTQLIIIQRGYQANGKTITT 705 Query: 391 QDQILNTLVNLR 402 DQ+L TL+ L+ Sbjct: 706 SDQLLQTLIGLK 717 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 79/325 (24%), Positives = 124/325 (38%), Gaps = 34/325 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL + +DV NNIAN T G+K A+F+D+ A + Sbjct: 4 SLFAGVSGLQSHQVAMDVESNNIANVNTVGYKYSRANFSDLLAQTRAIATAPQGELGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 +VGLG V+ +T+ F+ G+ N+ + DVAI +GFF + G+ + Y+R G FK D Sbjct: 64 PVQVGLGATVSSMTRIFSQGSVQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDFKFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ + A TNI+I P A T ++ NLNS Sbjct: 124 AGGNFVDNNGFIVQGWLRDRATGFVDATAPITNINIPPGLTTPASPTQHVVIKANLNSGP 183 Query: 163 PLP-TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 + + + + + D GN N V DS + ++ Sbjct: 184 LVKTYSPAYEVKSYPTGTPLPNPEAIDENGNP---------IDSGNMGVLFNDSGEAFNL 234 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 A+ T A +A GA+ L + N G A N Sbjct: 235 QTGQGIW---ASFTPTKTAATAGVAAGAVELDITLELDDGTLKQITTNGGLAGNTAAD-N 290 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNE 306 + ++ Q + G + YS Sbjct: 291 AARYVSAINAQTSVTGII-ATYSGG 314 >UniRef50_Q1YV97 Flagellar hook protein FlgE n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV97_9GAMM Length = 944 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 98/327 (29%), Positives = 148/327 (45%), Gaps = 32/327 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F +++GLNAA T L V NNIANS T GFK F D+FA S VG GV Sbjct: 1 MSFYTSLTGLNAATTQLAVTSNNIANSGTGGFKRSDTDFGDIFATSPLEKASSVVGRGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + ++Q+F+ G + LD+AI+ +GFF L S+G+ Y+RNG F L+E +VN G Sbjct: 61 LKEVSQEFSQGNIEFSANSLDLAITGDGFFPLESSDGTKIYTRNGAFMLNEQNQMVNSAG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPN-TLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 L P T G +P+ ++IP T+ TT + +NL S + P F+ Sbjct: 121 QALQSLPVDSTNKA-DFGVDPSALTIPRATVSEFLPTTEVELGLNLPS-EVTPITATFNP 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-------NNWQVYTQDSSDPNSIA--- 222 D+Y+K S+TV+ + G+A+ ++Y+VKT + N WQ Y A Sbjct: 179 DKPDTYHKTTSLTVYGTSGSANLATIYYVKTANATAETPFNKWQTYVYVDDQEVDTALIQ 238 Query: 223 ---KTATTLEFNANGTL--------VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 T N G L + A++ G +S L+ ++ Sbjct: 239 SSDTTGDQYFINKYGELKTRSELLELQSTSADSEKYLITQGTLYKKYSYDVLSEPTKSIP 298 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGT 298 A + + G D ++ N DG Sbjct: 299 ATASLTIAE-GSTYSDALNLTNNSDGV 324 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 114/211 (54%), Gaps = 7/211 (3%) Query: 197 SVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE-- 254 +VY +T D +W T D + +S T F G L + ++ A E Sbjct: 735 TVYVTQTKDGDW-TETTDGGEFDSNDVPYWTPIFLDKGELTFDTSGSLVSPVAGVKLESA 793 Query: 255 ---PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 +L++ NS Q ++++ +QNG GDLV I DDG VV +YSN + L Sbjct: 794 GITGGDITLNYDNS-TQFNSPFSVLSQSQNGAPEGDLVGVNIGDDGLVVASYSNGSQKSL 852 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 G+I+LANFA +GL GD + AT SG A LG G FGT+ GA E SNVDL+ EL Sbjct: 853 GKIILANFATPKGLRQVGDTSYYATSVSGDANLGEPGAAGFGTIRAGARERSNVDLTAEL 912 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 V++I AQRN+Q+NA+ I+T + T++ +R Sbjct: 913 VDLITAQRNFQANAKAIETSSSLTQTIIQIR 943 >UniRef50_A5N7C1 FlgE n=2 Tax=Clostridium kluyveri RepID=A5N7C1_CLOK5 Length = 348 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 100/424 (23%), Positives = 160/424 (37%), Gaps = 103/424 (24%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----------------- 44 + +SGL A L+VIGNNIANS+T +K+ + +F DM + Sbjct: 4 SMYSGISGLRANQQKLNVIGNNIANSSTTAYKTQSMNFQDMISQNLSDPSAPSTSIGGVN 63 Query: 45 GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 G + GLGV+VAGI+ DFT G+ T R LD F +D Sbjct: 64 GKQSGLGVQVAGISTDFTTGSMGTTNRNLD-------------------------FAIDG 98 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 V G G + T +I + N + + T A Sbjct: 99 TGYFVVGTGK--LGETSDDTGISIDEDNNI----LGGGDNEVENTIEAHY---------- 142 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 S S+ + + G + ++ T +NN T +D + Sbjct: 143 --------SRDGSFYLDTQGNLINQNGYRV---MGYLVTDENNTSTITYLQNDTEDTFQN 191 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 A +ANGT+ + + Sbjct: 192 AVQF-VDANGTVTSVTDKLVPLSIPNYITKDDQLV------------------------- 225 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 + S+ + DG + ++ T +LGQI + +F N GL EG N+++ + +SG ++ Sbjct: 226 --KVKSFSVGKDGIITAQLTDSTTAVLGQIAMVSFQNEGGLVKEGGNLYTTSSNSGQPIV 283 Query: 345 ------GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 + +G +T G LE SNVDL+++ +MIVA R +Q+N + I D IL L Sbjct: 284 MSGKGAENDNSAGYGKITQGFLEMSNVDLAQQFTDMIVATRAFQANGKMITNGDTILEDL 343 Query: 399 VNLR 402 +NL+ Sbjct: 344 INLK 347 >UniRef50_B9CY95 Flagellar hook protein FlgE n=1 Tax=Campylobacter rectus RM3267 RepID=B9CY95_WOLRE Length = 784 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 16/243 (6%) Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFV-----KTGDNNWQVYTQDSS------DPNSIAKT 224 + S +FDS G H++ + FV G W + Q + D Sbjct: 542 NMAAHSSSTDLFDSLGTKHNIKIDFVKRGYTPNGGTEWTMVIQVAEPNRINPDGEPANVI 601 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQN-----TGANNIVATT 279 + FN +G+L + A+ A L + Q + ++ + Sbjct: 602 TGYVRFNPDGSLATYSPASITFGAQNGSAGGQHIELKLGTTAQMDGLASTDNDSSTADIS 661 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G+L +I+ GT+VG+++N ++ L Q+ +A F+NNEGL+SEG N++S T +S Sbjct: 662 QDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFSNNEGLSSEGGNLFSRTANS 721 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G ++G A T G +++ +LE SNVDLS+ L +IV QR +Q+N++TI T D++LNTL+ Sbjct: 722 GDPVIGAAQTAGRGKISSSSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLL 781 Query: 400 NLR 402 L+ Sbjct: 782 QLK 784 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 115/300 (38%), Gaps = 26/300 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+GL A +DV GNNIAN T GFK A+F D+ + Sbjct: 4 SLWAGVTGLQAHQIAMDVEGNNIANVNTVGFKYSRANFDDLIYQTSRIATGPQNRHGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 +VGLGV+ T+ F G+ T + D+A+ +GFF + G + +Y+RNG F D Sbjct: 64 SMQVGLGVQTNSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSPDGGKTTYYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNT-LMAAKTTTTASMQINLNSSD 162 N V+ G + G+ I +I IP+ + A+ TT +++ NL+S + Sbjct: 124 SVGNFVDNGGNIVQGWMRDEVTGEIDPTRPIGDIKIPSGLTVPARATTNIALKGNLDSGN 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + +N + + G D + N ++ + Sbjct: 184 DVGNKKIPIYQLDQHHNWTDT----NKDGIKVDAEKHEENNVGENRFYVNKNGEQKMTER 239 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 + FN NG + I + A+ T +L+ + + T NG Sbjct: 240 GADLGVLFNKNGDAYNLRTGQGI---WASYADAKTKALNVGATPDGKFVPAKQLNITLNG 296 >UniRef50_B8DS27 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS27_DESVM Length = 525 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 47/311 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +VSGL + A ++ VIGNN+ANS+T G+KS + F D+F S ++G G Sbjct: 6 SMYASVSGLLSTAESISVIGNNLANSSTTGYKSMSMLFEDVFYSSITTSGGIDQIGNGSA 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNM 111 ++ I+ DF+ G+ +T +++AI+ G+F + D +G ++Y+R G F + LVN Sbjct: 66 ISAISTDFSQGSYQDTSEAMNMAIAGEGYFIVEDPQNDGQIYYTRAGDFTFNTEGYLVNS 125 Query: 112 QGLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 G Q+ G+ P T + ++ + + A TT ++ +NL+S + + Sbjct: 126 SGYQVQGWAVDPDTASSTDPSTTGALGDVQLKSRTSPASATTNVTLTVNLDSGGDDNSTS 185 Query: 169 PFSAS---------------NADSYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNW 208 Y + ++TV+D G+AH+++VYF + TG W Sbjct: 186 TTDPYFSLLTEWDGSADDPLGTTKYEYQTTITVYDEAGSAHELTVYFDQVEDSATGSTTW 245 Query: 209 Q--VYTQDSSDPNSIAK------------TATTLEFNANGTLVDGAMANNIATGAINGAE 254 + V S D +I A TL F+A G LV +T + + + Sbjct: 246 EYLVTMNPSEDVRTIGGQSVSGTSAAGLLMAGTLSFDATGALVSQTAFTLGSTASGDLTD 305 Query: 255 PATFSLSFLNS 265 + ++L+ L++ Sbjct: 306 LSNWTLAELST 316 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%) Query: 214 DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS------MQ 267 ++S + L+F + + + N T A + T F ++ Sbjct: 331 NASTTDEADAIQVELDFGLSAKSITDSW-NTTVTSAADIGTDGTLLFGFTSTAYDTDRTT 389 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 + A++ +++QNGY G L SY +++ G + YSN QTQ L + LA+F N++GL Sbjct: 390 SHDSASSTDSSSQNGYATGYLTSYYVDEGGVIYATYSNGQTQALFIVALASFNNDQGLQL 449 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 EG N++SAT SG A +G AG G +G++ LE SNVD+S E+V++IV QR YQ+N++ Sbjct: 450 EGGNLYSATTESGTANIGRAGQGIYGSIYGEKLEESNVDVSTEMVDLIVMQRAYQANSKV 509 Query: 388 IKTQDQILNTLVNLR 402 I T D++L T + L+ Sbjct: 510 ITTVDEMLQTALGLK 524 >UniRef50_Q4JMN8 Predicted flagellar hook protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMN8_9BACT Length = 1387 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 17/314 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F A++GLN ++ ++ NNIAN T GFK F D+F A S +G G Sbjct: 1 MSFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNASSSIGSGTI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + GI Q FT G + LD+AIS GFF L ++ Y+RNG ++ +R +V+ Sbjct: 61 LKGIKQQFTQGNIAASLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVNNDRYVVDS 120 Query: 112 QGLQLTGYPA-TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL------ 164 G L YP T T + + + +P T + T+ + +N+N++ + Sbjct: 121 AGQFLLTYPVNTDGSVTAKDLDSAVPLQLPVTSGDPQATSNIKLGVNVNAASDVVTDRPQ 180 Query: 165 -PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 F ++ +++ S+T+FD GN +VYF+KT + T I Sbjct: 181 FQDGYTFDPNDPETFTNSTSITIFDDLGNPTIATVYFIKTQAASADDPTNKYDTRLVIND 240 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 T T + + + + + + S + +Q Sbjct: 241 TVITPDLVSAVDDAGKQIFVDRFGQQTTTIPDDNYFIEGKGSPLYKLDDLQTLVPSQPAK 300 Query: 284 KPGDLVSYQINDDG 297 G+ S+ ++G Sbjct: 301 ISGEQTSFDFGEEG 314 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 3/187 (1%) Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 D + L F+ G LV + N + + F S Q ++ Sbjct: 1203 EDYYPLYIDEGELTFDKTGKLV--SPKNLVHYEKQEEGFSIALDVDFSTS-TQLAQPFSV 1259 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + Q+G+ G L +I+ GT+ NY+N Q LG+IV+ANF N GL G+ ++ Sbjct: 1260 LTVEQDGFTSGRLDGIEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYTE 1319 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG +G AG+ FG + +G+LE SNVD+++ELVN+I AQRN+Q++A+ I+T + Sbjct: 1320 TAVSGTPQVGEAGSEGFGNILSGSLERSNVDITEELVNLITAQRNFQASAKAIETTTGLT 1379 Query: 396 NTLVNLR 402 T++N+R Sbjct: 1380 QTIINIR 1386 >UniRef50_C5ZVV6 Flagellar hook protein n=2 Tax=Helicobacter RepID=C5ZVV6_9HELI Length = 751 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 17/291 (5%) Query: 129 QQGANPTNISIPNTLMAAKTTTTASMQIN----LNSSDPLPTVTPFSASNADSYNKKGSV 184 QQGA N++I + TTT + N +N+ + S + ++ Sbjct: 460 QQGAAYDNLNIFVSAYNDTLTTTNVLFKNQMKAMNTGVLVEGGNITSTAGLRMATYSQTL 519 Query: 185 TVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT--------ATTLEFNANGTL 236 ++DS GN HD ++ F K N W I T ++ F G + Sbjct: 520 DIYDSLGNKHDFTIQFTKVAGNQWNWRIIVPEPAELIGGTAQRPNILEGGSVTFGEQGEI 579 Query: 237 VDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVSY 291 + + A P + L F + + + +GY G L + Sbjct: 580 LGFNPSTIQFKPNNGAAFPQSIDLDFGTSGGYDGLTSTAAESQANNIDGDGYTAGMLQDF 639 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 + GT++G + N QT L Q+ +A+FAN EGL G N+++ + +SG +GTAG+G Sbjct: 640 YFDATGTMIGKFDNGQTLALAQVAVASFANYEGLQESGSNLFAESPNSGGPTIGTAGSGG 699 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++ LE SN DLS+ L +IV QR +Q+++++I T DQILNTL+ L+ Sbjct: 700 RASIQASKLEMSNSDLSRGLTQLIVVQRGFQASSKSITTSDQILNTLLGLK 750 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 33/287 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + VSG+ A LDV NNIAN T GFK A F+ M + +K Sbjct: 4 SLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRAATIPYAGYGGVN 63 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 VGLG + T+ F+ G+ NT R D+A+ NG F + ++ G + Y+R+G F D Sbjct: 64 DYSVGLGTGIETTTKIFSQGSLQNTDRKADLALEGNGMFVVSNNGGFTNMYTRDGAFSFD 123 Query: 104 ENRNLVNMQGLQLTGYPAT----------GTPPTIQQGANPTNISI-PNTLMAAKTTTTA 152 NLV G + G+ G + NI+I P + AK T T Sbjct: 124 AVGNLVTTSGYIVQGWVRDLSKLNCDCGSGNINRVDSTGPIGNITIDPRLTIPAKATETV 183 Query: 153 SMQINLNS---SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF-VKTGDNNW 208 + INL S ++ +P +++A++Y G ++D+ +++ V D Sbjct: 184 TGNINLTSGTKTENTTCPSPLDSTSANNYIAGGLDRLYDTADRQLEVAQDMGVMFNDAGE 243 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEP 255 + Q+ +TATT + N V + +P Sbjct: 244 AMQLQEGQGIWVSYQTATTTPLHINAAAVGASSITINGVTITWNNDP 290 >UniRef50_C5BRS0 Flagellar basal body protein FlgE n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRS0_TERTT Length = 813 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 93/291 (31%), Positives = 147/291 (50%), Gaps = 47/291 (16%) Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK---------TGDNNWQ 209 + T+ F ++ +YN S+ V+DS G +H M+ YFV+ T N+W Sbjct: 523 DPEFTDVTLNAFDPTDQGTYNSATSMNVYDSLGVSHIMTQYFVRQEYDPNDPTTSPNHWV 582 Query: 210 VYTQ----DSSDPNSIAKTATTLE---------FNANGTLVD------------------ 238 ++ Q + DP++ +E FN NGTL + Sbjct: 583 MHVQIDGRNVGDPDTSLPPPANIEPTLASFNVFFNENGTLNELLTEDMLISNWVVLDQQG 642 Query: 239 -----GAMANNIATGAINGAEPATFS--LSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 N +A G+I EP T S + L Q+ ++ T Q+GY G L Sbjct: 643 NPTGAMGPQNVLAGGSIVIPEPPTSSNFVIELAGTSQSGTDFSVDDTDQDGYASGRLSGL 702 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 I+++G + Y+N + Q L Q+ LA+F N +GL G+ +W+ + +SG +GT +G Sbjct: 703 AIDENGVIFARYTNGEGQPLAQVALADFTNQQGLQPIGNTMWAESFASGPPNVGTPQSGA 762 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +GALE SNVDLS+ELV +I+AQRN+Q++A+TI+T DQ+ T++NLR Sbjct: 763 LGAIQSGALEESNVDLSEELVRLIIAQRNFQASAKTIETADQVTQTIINLR 813 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 11/171 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F+ A+SG+ AA+T+L V GNNIAN++T GFK A F D+FA S +G GV+ Sbjct: 1 MPFNTALSGIRAASTDLTVTGNNIANASTIGFKRSRAEFGDVFATSVLGAGANAIGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F G T LD+AI+ NGFF L D G+ YSR G F LD+ + N G Sbjct: 61 VEDVAQNFKQGNVAFTQNELDLAINGNGFFVLSD-QGTPVYSRAGTFGLDDQGYVTNNVG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 +L G+ A T +I I + + + TT + L+S++P+ Sbjct: 120 ARLQGFQAD---STGNISGISDDILIQTSNLPPRQTTLVESVLTLDSTEPV 167 >UniRef50_Q21IK9 Flagellar basal body FlaE n=3 Tax=Bacteria RepID=Q21IK9_SACD2 Length = 804 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 100/327 (30%), Positives = 155/327 (47%), Gaps = 47/327 (14%) Query: 123 GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKG 182 T + GA + +L A T Q + + F ++ +YN Sbjct: 478 DTDAIVVGGAIDMVLEEGYSLENAVPQLTGIFQPFTANEFTPIVINAFDPTDQSTYNSAT 537 Query: 183 SVTVFDSQGNAHDMSVYFVKTG---------DNNWQVYTQ----DSSDPNSIAKTAT--- 226 S+T++DS GN+H M+ YFVK N+W +Y + D DP++ Sbjct: 538 SMTIYDSLGNSHVMTQYFVKQDYDATDPTSVPNHWVMYARIDDADVGDPDTTLPPPANTQ 597 Query: 227 ------TLEFNANGTL---------------VDGAMANNIATGAINGAEPATFSL----- 260 + FN +G+L VD N A G N T ++ Sbjct: 598 PTLASYDVYFNEDGSLNTLLTSDMLISNWTPVDADGNPNGALGPQNILAGGTQTVVEPPT 657 Query: 261 --SF---LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 +F L Q ++ +QNG+ G L I D+GT+ ++N Q+ LGQ+V Sbjct: 658 SSNFVISLEGTTQFGSEFSVNDISQNGFSTGRLSGLNIADNGTIFARFTNGQSLRLGQVV 717 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 LA+F+N +GL G+ +W+ T SG +GT G+ G + GALE SNVDLS++LVN+I Sbjct: 718 LADFSNQQGLQPTGNTMWAETFESGSPNVGTPGSAALGAVQAGALEESNVDLSEQLVNLI 777 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 +AQRN+Q++A+TI+T D + T++NLR Sbjct: 778 IAQRNFQASAKTIETADAVTQTIINLR 804 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 128/304 (42%), Gaps = 30/304 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F A+SG+ AA+++L V GNNIAN++T GFK+ A F D++A S +G GV+ Sbjct: 1 MPFDTALSGIRAASSDLSVTGNNIANASTTGFKASRAEFGDVYATSVLGAGVNAIGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F+ G T LD+AI+ NGFF + G Y+R G F LD+ +VN G Sbjct: 61 VQEVAQRFSQGNVGFTENELDLAINGNGFFVVSQ-QGETLYTRAGSFGLDDEGYVVNNTG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L G+ A G G +I I + +A + TT +NL+S++P+ S Sbjct: 120 AVLQGFSADGAGNI---GGIQGDIRIQTSNLAPRQTTGVESLLNLDSTEPVLQTIGAEFS 176 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 A G A ++ + D+ + F+ Sbjct: 177 TA---------------GTAVGVTQ--IGRQTAEKSTLLMDAITFPIQNLDTNPIIFDI- 218 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 TL + NN + + S+ L +QQ + N + NG V + Sbjct: 219 -TLAGPTVGNNGTVTINLDSIDFSTSIDDLTELQQIVSSINSQLYSPNGGADPIDVVASV 277 Query: 294 NDDG 297 DG Sbjct: 278 GTDG 281 >UniRef50_C1A555 Flagellar hook protein FlgE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A555_GEMAT Length = 506 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 15/307 (4%) Query: 102 LDENRNLVNMQGLQLTGYPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 D ++L + I A+ + + + + Sbjct: 208 FDSQG---TKHDVKLQMWKTGPNSWDWRIDPIASAQTFEVETDGNSPP--SDIPLPTPPA 262 Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN 219 + LP ++ YN + S G + ++ ++ S D Sbjct: 263 GYEVLPDNVRVYSATGVEYNNPADYSF--SAGPPPAVQFTANMPVNSQIKIGYFMSPDSA 320 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS----MQQNTGANNI 275 + ++ + T F+ G L A+ A+ GA P L+ Q + ++ Sbjct: 321 TPSENSGTFTFDNAGLLNTNISAS--LNFAVPGANPVRIDLTLGGGVNGLTQFASTSSTA 378 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 V QNGY G L ++ I+ G + G ++N T L +IVLA+F N GL GDN++ Sbjct: 379 VLRDQNGYTAGTLQNFSIDRFGLITGFFTNGTTSPLARIVLADFNNPSGLLRIGDNMYQE 438 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 + +SG A+LG A G+ +T+GALE SNVDL++E NMIVAQR +Q+N + + T D++L Sbjct: 439 SANSGGAVLGFALEGSQSQMTSGALEMSNVDLAQEFTNMIVAQRGFQANGKVVSTSDEML 498 Query: 396 NTLVNLR 402 L+ ++ Sbjct: 499 QELMTIK 505 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 116/304 (38%), Gaps = 29/304 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFAD----MFAGS----------- 46 + VSGL +DVIGNNIAN T FK+G +F + + AG+ Sbjct: 4 SLYAGVSGLRNNQVRMDVIGNNIANVNTVAFKAGRVTFKEGFAQLLAGASRPPGDQGGIN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG+++ I Q F G TG D+AI + FF + N FY+R G F++D Sbjct: 64 PIQIGLGMQIGSIDQIFNQGNLETTGLNTDIAIQGDSFFVVRKGN-QSFYTRAGNFQVDA 122 Query: 105 NRNLVN-MQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 LV+ G + G Q +I +P ++A TT + NLN+S Sbjct: 123 LGQLVSPANGFIVQGRM----YENGQLQDGIQDIRLPFGQKVSANPTTDMKLAGNLNASA 178 Query: 163 PLPTVTPFSASNADSYNKKGSVT-----VFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD 217 P+ + + + T VFDSQG HD+ + KTG N+W + Sbjct: 179 PVFQGDFNDPMDRALPINEKAWTETQIGVFDSQGTKHDVKLQMWKTGPNSWDWRIDPIAS 238 Query: 218 PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 + ++ L + + + + G V Sbjct: 239 AQTFEVETDGNSPPSDIPLPTPPAGYEVLPDNVRVYSATGVEYNNPADYSFSAGPPPAVQ 298 Query: 278 TTQN 281 T N Sbjct: 299 FTAN 302 >UniRef50_D1B5D3 Flagellar hook protein FlgE n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B5D3_SULD5 Length = 851 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 18/272 (6%) Query: 149 TTTASMQINLNSSDPLPTVTPFSASNADSYNKK--GSVTVFDSQGNAHDMSVY-----FV 201 +T S +++S T + S Y S ++DS G+ H + F Sbjct: 580 STNDSFTTSMSSIQGTLTSGTATRSTQSLYMASLASSTDIYDSLGSKHTIRFQYTKTGFT 639 Query: 202 KTGDNNWQVYTQDSSDPNSIAK------TATTLEFNANGTLVDGAMANNIATGAINGAEP 255 +TG W V + ++ FN++G+L N T Sbjct: 640 ETGGTEWSVTVTVPEPGDINLGEEPKNVVTGSIRFNSDGSLATYTPRNLTYTANNGSTAN 699 Query: 256 ATFSLSF-----LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 L+F L+ + ++ Q+GY GDL +++ GT++G+++N ++ Sbjct: 700 QIVQLNFGSVGQLDGITSFDKDSSTTNINQDGYTGGDLSGLSVDETGTIIGSFTNGRSFA 759 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 L Q+ ++ F NN GL S+G N + T +SG + G AGTG G++ + +LE SNVDLS+ Sbjct: 760 LAQVAMSTFTNNGGLESDGGNCYIQTSNSGDPVFGQAGTGGKGSVQSSSLEMSNVDLSRS 819 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L +IV QR YQ+N++TI T D++LNTL+ L+ Sbjct: 820 LTQLIVIQRGYQANSKTITTADEMLNTLLQLK 851 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 26/284 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A V+GL A +DV NNIAN T G+K A+F+++ + + Sbjct: 4 ALWAGVTGLQAHQIAMDVESNNIANVNTTGYKYSRANFSNLLSQTVSIATAPQGELGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG ++ +T+ F G+ T + D+AIS +GFF + G+ + Y+RNG F D Sbjct: 64 SMQIGLGTTISTVTKIFEQGSIETTDKDTDLAISGDGFFVVSPDGGTTYKYTRNGDFSFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N N V+ G + G+ I + +NI I P A T+ S++ NL+S Sbjct: 124 ANGNFVDSNGYIIQGWLRDQETGQIDTTSPISNILITPGYTTPANATSIVSIKANLDSGT 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + T S + D+ G M V D+N ++++ Sbjct: 184 SVGTNKTSIYSLDSKSGWVDA----DNDG---IMDAAEVHNEDDNADTIFNNNTEVYERG 236 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 L + L + A E + Sbjct: 237 VDFGVLFDSDGEALSLTDGQGTWISYAQAKTERIEVEADASDVT 280 >UniRef50_C1SLD6 Flagellar hook protein FlgE n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD6_9BACT Length = 829 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 114/252 (45%), Gaps = 20/252 (7%) Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--DNNWQVYTQDSSDPNSIAKTATT- 227 + A S T++D+QGNAH + F + DN W++ D I+ TT Sbjct: 577 TVQEAKGGTLTTSQTIYDAQGNAHTVQYNFEMSDSLDNVWKLTVSTPDDGAEISFNETTG 636 Query: 228 ----LEFNANGTL----------VDGAMANNIATGAINGAEPATFSLSF---LNSMQQNT 270 + FNANG+ + N G L + + ++ Sbjct: 637 NQVYMHFNANGSFNYLTTESGQRIASLSMNYDTGGGAGVVSDIEMDLGTAGKFDGIYISS 696 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + I Q+GY G L S N +G ++G Y+N Q + QI A F N GL GD Sbjct: 697 DDSGITKAAQDGYATGLLESTLFNSNGEIIGYYTNGQVATIAQIATATFTNPGGLTKVGD 756 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 + + +SG +G GTG G + LE SNVDLS E VNMI QR +Q+N++ I T Sbjct: 757 TTFQKSSNSGDPAIGRPGTGFRGKVAAETLENSNVDLSTEFVNMITTQRGFQANSRVITT 816 Query: 391 QDQILNTLVNLR 402 D++L L++L+ Sbjct: 817 SDEMLQELMSLK 828 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 45/293 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + A+SGL+ +DV+GNNI+N T G+KSG A F DM + Sbjct: 4 SLYSAISGLSVNQQAMDVLGNNISNVNTVGYKSGRAVFEDMLSQTLVGSTAPSDTLGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLD 103 ++VGLG +AG+ F G+ +T D+AI +GFF + + S + Y+R G F+ D Sbjct: 64 STQVGLGTSLAGVDTIFETGSMQSTSVNTDLAIQGDGFFVIKGAGSSDLLYTRAGDFRFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKT--TTTASMQINLNSS 161 + +LV G + G+ + +I + + A+ T+ AS+ L++ Sbjct: 124 TSGSLVTSSGFYVQGWMVDPDTGELLTEGTTEDIVLSSAYQTAQAKVTSEASLAGVLDTD 183 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 S+ + S +++ TGD+ +QVY+ D ++ + Sbjct: 184 AD------------------PSIVSYPSL-------LHYADTGDSIFQVYSDDGANMDLA 218 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN 274 + ++ + G G + N ++P N + G + Sbjct: 219 DNESIKVKAHGTGMTEMGYIYNTSDVNLDLASDPQLLVYINSNPVTLEYGVDF 271 >UniRef50_C8QYQ3 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYQ3_9DELT Length = 806 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 3/187 (1%) Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 +D I A +F + N TG F Q ++ Sbjct: 622 TDMEEIFGPADMDDFGDFHVISGSPERNGSQTGTAVDNRFGDTEAMF---TTQYANSSTT 678 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + QNG+ G L S ++ G + GN+SN Q + ++ LA+FAN +GL G N++ A Sbjct: 679 IYQDQNGFAAGFLQSVSVDTAGIITGNFSNGQVLMQAKVALADFANLQGLHKVGGNIFRA 738 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG + G GT G + +LE SNVDL E V MI QR +Q+N++ I T D++L Sbjct: 739 TTQSGAPVTGEPGTNGLGEIAPNSLEMSNVDLGTEFVKMITTQRGFQANSKMITTTDEML 798 Query: 396 NTLVNLR 402 N L+N++ Sbjct: 799 NELINIK 805 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 23/234 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL+ + V+G+NIAN T F S ++F D+ + S +VG GV Sbjct: 6 SLYAGISGLSTMGNGMSVLGDNIANVNTVAFNSSRSTFQDVLSQSVSTAAGTAQVGRGVT 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF--YSRNGQFKLDENRNLVNM 111 + + F G+ +T D+AI GFF L + + ++R G+F+ D++ L + Sbjct: 66 LTTVDGLFAQGSFESTSTPTDMAIGGEGFFMLRGGDSAEADMFTRAGEFRFDQHGFLTSP 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP------ 165 G + G+ I+ +I + + T + +NL++ Sbjct: 126 GGHFVQGWSVDKNTGQIE--GTIGDIRMDRST-PPVQTEQIDLIVNLDARVDQASASTLY 182 Query: 166 ---TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDS 215 T A +Y S+ V+DS+G A D+++YF +T +N W+ Sbjct: 183 DSWNGTADDPIAATNYQYTTSLKVYDSKGVARDVTIYFDRTAKENEWEFLVTSD 236 >UniRef50_Q1NLV6 Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NLV6_9DELT Length = 1069 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 53/137 (38%), Positives = 79/137 (57%) Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 Q ++ + Q+G+ G L S ++ G + GNYSN Q + Q+ LA+FAN +GL Sbjct: 932 TTQYANSSTTIFQDQDGFAAGFLQSVSVDTAGIITGNYSNGQVLMRAQVALADFANLQGL 991 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 G N++ AT SG + G GT G + +LE SNVDL E V MI QR +Q+N+ Sbjct: 992 HKVGGNIFRATTQSGAPVTGQPGTNGLGEIAPNSLEQSNVDLGTEFVKMITTQRGFQANS 1051 Query: 386 QTIKTQDQILNTLVNLR 402 + I T D++LN L+N++ Sbjct: 1052 KMITTTDEMLNELINIK 1068 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 30/238 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL+ +++V+G+NIAN T + + A+F D+ + S +VG GV Sbjct: 6 SLYAGISGLSTMGNSMNVLGDNIANVNTTAYNASRATFQDVLSQSVATSAGSAQVGRGVT 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF--YSRNGQFKLDENRNLVNM 111 + + F G+ +T D+AI GFF + S + ++R G+F+ D NL+N Sbjct: 66 LTTVDGLFAQGSFESTSTATDMAIGGEGFFMMRGSGSAEADMFTRAGEFRFDTQGNLINP 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS---------- 161 G + G+ I+ NI T M +NL+S Sbjct: 126 AGHFIQGWQVDKDSGQIEGTIGDINI---GRATPPVPTDRIDMIVNLDSRIPRETTEQRL 182 Query: 162 ------DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYT 212 + V P +A+++ +V V+DS+G AHD+++YF +T +N W+ Sbjct: 183 YEAWNGTNMTGVNPSPPIDANNFEYTTAVKVYDSKGAAHDVTIYFDRTTQENQWEFLV 240 >UniRef50_D2L1Z5 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1Z5_9DELT Length = 551 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 125/339 (36%), Gaps = 56/339 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL A +T + IGNN+AN T GFK F D+ + ++G GV+ Sbjct: 8 SMWSGVSGLLANSTKMSTIGNNLANVNTVGFKGARTDFMDLMSANIGTAAGDKQIGRGVR 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-------------DSNGSVFYSRNGQF 100 V + D++ G T LD+AI+ NGFF + N + +YSR G F Sbjct: 68 VGTVVSDYSQGGLETTSNSLDMAINGNGFFMVKQKSQVGSNGKMLNTGNQTNYYSRAGNF 127 Query: 101 KLDENRNLVNMQGLQLTGYPATGTP-----------PTIQQGANPTNISIPNTLMAAKTT 149 D + LV QGL + G+ +I + AK T Sbjct: 128 SFDSDGYLVTPQGLAVQGWKVDQERIDAANASGTVLSQTPVSGEIQDIRLSQFTSPAKAT 187 Query: 150 TTASMQINLNSSDPLPTVTPFSASN------------------ADSYNKKGSVTVFDSQG 191 ++ ++ NL+S + S +N + +Y+ + +V V+D G Sbjct: 188 SSVTLITNLDSDTKSASTRSASNANYYYAMTESWDGTQDPAMPSTAYSYQTTVKVYDENG 247 Query: 192 NAHDMSVYFVKTGDNNWQVY-----TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIA 246 + H ++ Y+ K D N + Y T ++ +A T L+ + Sbjct: 248 SPHTLTTYYDKVADVNGKEYWEYTVTCAPNEDGRVASNGTPFGGTEAAGLLMTGTMTFDS 307 Query: 247 TGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKP 285 +G++ T S A NGY Sbjct: 308 SGSMENMSAYTMKASNATP-GDFDATQWTAADVSNGYPV 345 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 134/253 (52%), Gaps = 9/253 (3%) Query: 155 QINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD 214 + +SS + ++ ++ +++ T + + ++ V+ + +T Sbjct: 302 TMTFDSSGSMENMSAYTMKASNATPGDFDATQWTAADVSNGYPVFTANFKSVSNASFTNS 361 Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE-----PATFSLSFLNSMQQN 269 +++P +IA GA +++AT + A P+T ++ N Sbjct: 362 TNNPLNIALNFGISNIAG---FSAGASGSSLATAGHDPANLVHFNPSTMKVN-SNVTTNY 417 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 +++ V ++QNGY G L + ++ DG + G++SN QTQ L + LANF N +GL+ EG Sbjct: 418 ATSSSTVFSSQNGYTSGLLNNVSVDADGILTGSFSNGQTQKLWALALANFTNLQGLSREG 477 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 N+++AT SG A TG+ G+++ LE+SNVD++ E+V+MI+ QR +++N++TI Sbjct: 478 SNLYAATLESGQGTTNRANTGSVGSISGNTLESSNVDMATEMVSMILTQRGFEANSKTIT 537 Query: 390 TQDQILNTLVNLR 402 T D +L+ ++ L+ Sbjct: 538 TVDSMLSEVIQLK 550 >UniRef50_B5Y7E4 Flagellar hook protein FlgE n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7E4_COPPD Length = 519 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 132/289 (45%), Gaps = 27/289 (9%) Query: 123 GTPPTIQQGANPTNISIPNT-LMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK 181 P +I IP + + TT Q NLN++ P F+ SN Sbjct: 248 ADPVVEPDTNKVGDIVIPRSLTIPPTPTTNVQFQGNLNANAPEGANVTFTVSN------- 300 Query: 182 GSVTVFDSQGNAHDMSVYFVKT-GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVD-- 238 V DS G H M + VK+ N W V S + + F+++G + D Sbjct: 301 ----VIDSLGVTHSMLINAVKSASPNTWDVTV----SMESASPVQYVVTFDSDGRISDVK 352 Query: 239 -----GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 I NGA+ +L+F Q A++ V +G G L+S+ + Sbjct: 353 KDGQSYGTTPTIDFDPGNGAQTRQITLNFSAITQY--AADSRVVGLVDGNVNGKLLSWFV 410 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 D+G V+G + N Q + L QI LANF N GL+ EG+N+W T +SG AG Sbjct: 411 TDEGKVMGEFDNGQIRELAQIALANFQNPAGLSREGNNLWQNTANSGFRGYVEAGDLG-S 469 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + GALE+SNVDL++E N+I+ QR +Q++ + I T D++ ++ L+ Sbjct: 470 LIIRGALESSNVDLAEEFTNLIITQRGFQASTRVITTSDEVTQDIIGLK 518 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 119/356 (33%), Gaps = 51/356 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----------------- 44 +F +SGL +DVI NNIAN T +K+ A+F+D+ A Sbjct: 4 SFFNGISGLKVHQIRIDVISNNIANVNTTAYKAARATFSDVVALTLKGARAPYGGRGGTN 63 Query: 45 GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 S+VGLGV +A I T G T NT R D+AI +GFF + D +++R+G F +D Sbjct: 64 PSQVGLGVGLATIDNIMTQGPTNNTNRASDLAIQGDGFFVVSDGQ-RNWFTRDGAFDIDL 122 Query: 105 NRNLVN-MQGLQLTGYPA--------------------------TGTPPTIQQGANPTNI 137 L+ GL++ G+ G PT Sbjct: 123 TGRLIQLSTGLKVQGWSMIPTQKIRFGGTVGTASTSFGFRVYDNEGNEHVFTALVQPTPS 182 Query: 138 SIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTV-FDSQGNAH-- 194 + + T TAS + L + + S+ + F S G ++ Sbjct: 183 GSTAAIHIYEGTDTASPNLVLTQTLGFANGVVQAGQTGVLNWNNMSINLDFTSLGMSNAT 242 Query: 195 --DMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAING 252 + V D N T ++F N + N+ N Sbjct: 243 VSALVADPVVEPDTNKVGDIVIPRSLTIPPTPTTNVQFQGNLN-ANAPEGANVTFTVSNV 301 Query: 253 AEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 + + S L + ++ N T + DG + + Q+ Sbjct: 302 IDSLGVTHSMLINAVKSASPNTWDVTVSMESASPVQYVVTFDSDGRISDVKKDGQS 357 >UniRef50_C3XKG1 Flagellar hook protein FlgE n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XKG1_9HELI Length = 758 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 16/272 (5%) Query: 147 KTTTTASMQINL---NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT 203 TT + + N+ + + + +V ++DS GN H+ ++ F K Sbjct: 486 NNTTNVLFKNQMKAMNTGVLVEGGQVTTTAGLRMATFAQTVDIYDSLGNKHEFTMQFEKV 545 Query: 204 GDNNWQVYTQDSSDPNSIAKT--------ATTLEFNANGTLVDGAMANNIATGAINGAEP 255 GD+ W I + ++ F NG L+ ++ + P Sbjct: 546 GDSEWSFRIIVPEPAELIGSSAQRPNILEGGSVTFGENGELLGVNPSSIQFKPNTGASFP 605 Query: 256 ATFSLSFLNS-----MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 L F + + + +GY G L Y + GT++G++ N Q Sbjct: 606 QNIELDFGKGGGFDGLTSTSRESQAQNVNGDGYASGVLKEYYFDATGTLIGSFDNGQNLA 665 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 L Q+ +A FAN EGL G N+++ + +SG A +GTAGTG ++ LE SN DLS+ Sbjct: 666 LAQVAIATFANYEGLQESGSNLFAESANSGRATIGTAGTGGRASVAASKLEMSNADLSRG 725 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L +IV QR +Q+N+++I T DQ+LNTL+ L+ Sbjct: 726 LTQLIVVQRGFQANSKSITTADQVLNTLLGLK 757 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 33/296 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + VSG+ A LDV NNIAN T GFK A F+ M + +K Sbjct: 4 SLWSGVSGMQAHQIALDVESNNIANVNTTGFKYSRADFSTMVSQTKRSATIPYAGYGGVN 63 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 VGLG + T+ F G+ NT R D+A+ G F + ++ G S Y+R+G F D Sbjct: 64 DFSVGLGTGIETTTKIFEQGSLQNTDRKGDLALEGKGMFVVSNNGGYSNMYTRDGAFMFD 123 Query: 104 ENRNLVNMQGLQLTGYPAT----------GTPPTIQQGANPTNISI-PNTLMAAKTTTTA 152 NLVN G + G+ + + NI+I P + AK T Sbjct: 124 AVGNLVNTSGFIVQGWVRDLSKLNCACGSDSLNRVDSTGPVGNITIDPRLTIPAKKTGVV 183 Query: 153 SMQINLNS---SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF-VKTGDNNW 208 INL S ++ + +P +S+A++Y G ++D+ H++ V D Sbjct: 184 VGNINLTSGNKTENIGCPSPLDSSSANNYVAGGLDRLYDTSDKQHEIPQDMGVMFNDAGE 243 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN 264 + Q+ +TAT G + GA+ + + + + Sbjct: 244 AMRLQEGQGIWISYQTATAEPLELGGNIPAGAVTTTVNINGQEITWTNDPTANGSS 299 >UniRef50_B5J6Y8 Conserved domain protein n=3 Tax=cellular organisms RepID=B5J6Y8_9RHOB Length = 1412 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 132/319 (41%), Gaps = 25/319 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F A++GLN A ++ NNIAN T GFK A F D+FA S +G G Sbjct: 1 MSFYTALTGLNGAQADIAASSNNIANVGTTGFKLSRAEFGDIFATSPLQNSTSSIGSGAI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + G+ Q FT G + + LD+AIS GFF L ++ V Y+RNG F +D NRN+V+ Sbjct: 61 LKGVKQQFTQGNISASLNALDMAISGQGFFALKPSLTSTQVVYTRNGSFNVDNNRNVVDS 120 Query: 112 QGLQLTGYPATGTPP-TIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL------ 164 G L YP T + + + +P T + TT + +N+ ++ + Sbjct: 121 SGQFLLTYPVNEDGSVTAKDIDSAVPLRLPVTSGDPQGTTKVDLAVNVPANADVVTENQK 180 Query: 165 -PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD----PN 219 F ++++S+ S T+FD GN +VYF+KT N T + Sbjct: 181 FVDGYVFDPNDSESFTNSTSFTIFDDLGNPTIATVYFIKTQRANAADPTNKFETRLVIND 240 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 + +G + N T + + T +S + Sbjct: 241 EVVPPNLVPAVVDDGRQIFIDQFGNQTTDVPDPSYFNT----GRSSPLYKLDDLRTRVPS 296 Query: 280 QNGYKPGDLVSYQINDDGT 298 Q G+ + D+GT Sbjct: 297 QPAALTGEASGFDFGDEGT 315 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-NSMQQNTGANN 274 +D + L F+ G L+ T + +E + SL ++ Q + Sbjct: 1228 TDYFPLYLDEGELTFDKTGRLISPQG----LTRYDSQSETFSISLDIDYSASSQLATPFS 1283 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 + QNG+ G L I+ +G + NY+N Q + LG+IVLANF N GL G+ + Sbjct: 1284 VNNLDQNGFTSGRLDGLNIDSNGLLRANYTNGQNKPLGKIVLANFNNQNGLKQVGNATFV 1343 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 T SSG ++G AGT FG++ +GALE SNVD+++ELVN+I AQRN+Q++++ I+T Q+ Sbjct: 1344 ETASSGEPIIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQRNFQASSKAIETSTQL 1403 Query: 395 LNTLVNLR 402 T++N+R Sbjct: 1404 TQTIINIR 1411 >UniRef50_C4V4D1 Flagellar hook protein FlgE n=2 Tax=Selenomonas RepID=C4V4D1_9FIRM Length = 680 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 15/270 (5%) Query: 143 LMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 KT ++ + SS ++ ++ + ++TV+DS G H + V F K Sbjct: 415 QFGGKTVSSVVLNTKSGSSIDGLVGKDYARNDTFYPSVATTITVYDSLGAKHSVPVVFTK 474 Query: 203 TGDNNWQVYTQDSSDPNSIA----------KTATTLEFNANGTLVDGAMANNIATGAING 252 +N W + D +I T T L+F+ +G+ V G + ++ NG Sbjct: 475 ASNNKWTLSLGSGGDTFNITEADGTTTTVALTKTDLKFDTSGSYVSGTASLSLT--YENG 532 Query: 253 AEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLG 312 A P +++ L ++ Q +G + I A +G+ G L S I+ G + G Y+N Q Sbjct: 533 AAPQQVAMN-LAAITQYSGTSTI-AADSDGHAAGTLASVDIDSTGVITGTYTNGVRQKEA 590 Query: 313 QIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELV 372 QI +A F N GL G N++ + +SG + A LT ALE SNVDL+ + Sbjct: 591 QIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGT-ELTTSALEMSNVDLADQFS 649 Query: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +MI+ QR +QSN++ I D++L TL+N++ Sbjct: 650 DMIITQRGFQSNSKMITVSDEMLETLINMK 679 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 97/359 (27%), Positives = 144/359 (40%), Gaps = 37/359 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + AVSGL T +DV+GNNIAN T GFK+ +FADM + Sbjct: 4 SMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASAPNGTIGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAIS-QNGFFRLVDSNGSVFYSRNGQFKLD 103 ++GLG+ VA +T+G+ TG+ D+AIS +G F + FY+RNG F D Sbjct: 64 PKQIGLGMSVASTDLLYTNGSVQQTGKNTDIAISRGDGLFVVSKGQ-QKFYTRNGAFSFD 122 Query: 104 ENRNL-VNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSS 161 NL + GL + GY A ++ G N TNI IP M A+TT TAS NLN++ Sbjct: 123 AEGNLTIPSTGLYVQGYMANNGVISVA-GDNTTNIRIPAGKSMEAQTTATASYTKNLNAT 181 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 P V AD + + G V T DN ++Y S+ ++ Sbjct: 182 TPGYEVANVLVRYADGTTQTTNSYAPSEVGK-------LVLTMDNGRKIYLDSSAPAQTV 234 Query: 222 AKTATTLEFNAN----GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 T +++ G + +A + N + P + S ++ + + Sbjct: 235 GSAPTGTLYSSTISNVTASTTGHVDAVLAMDSGNPSSPKEINGSATATITRTGATSLTSG 294 Query: 278 TTQNG---YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA-SEGDNV 332 T G G + S + VV T G +V N + GD Sbjct: 295 TYAFGDVFNISGKITSVVSSPPSDVVLTLDANNTITPGTVVTVKVPNPNSFTYAVGDTY 353 >UniRef50_C6BZU9 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZU9_DESAD Length = 513 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 33/316 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL + V+ NN+ANS+T GFKS A F D+F + +VG G Sbjct: 6 SLYTGISGLYVNSFATSVVSNNLANSSTVGFKSSDAIFEDVFYSTLTTGGGLAQVGNGAG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 V+ I D++ GT N+ +VAI+ +G++ +VD + + +Y+R G F D++ LV+ Sbjct: 66 VSTINTDYSQGTYQNSSISTNVAINGDGYYMVVDPDTSTTYYTRAGNFDFDKDGFLVDAY 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---------- 162 G Q+ G+ + T I + + K T+ ++ +NL+S Sbjct: 126 GNQVQGW----EMENGSASGSLTTIQLDQSQSPPKATSEIALTMNLDSQSVDEAITANPY 181 Query: 163 ----PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF----VKTGDNNWQVYT-- 212 L T + Y+ ++TV+D G+AHDM+ Y V N Y Sbjct: 182 TSLFELYDGTQNPPLDDSQYSYSTTMTVYDENGSAHDMTYYMDPVDVDADGNIVWEYVAA 241 Query: 213 QDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 ++ D L + L + G + T + S ++ ++ Sbjct: 242 YEAEDDMRSGSDGLDLNTTSGAGLAMTGTLTFNSEGQMTSMTAFTLNDSAASTATKDPAN 301 Query: 273 NNIVATTQNGYKPGDL 288 + + + GY +L Sbjct: 302 WELASLSPAGYPEANL 317 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 141/301 (46%), Gaps = 16/301 (5%) Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 +D + N+V + Y A + G + S M T + Q+ +S Sbjct: 228 VDADGNIVWE---YVAAYEAEDDMRSGSDGLDLNTTSGAGLAMTGTLTFNSEGQM---TS 281 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 T+ +AS A + G + ++ F + + + S N+ Sbjct: 282 MTAFTLNDSAASTATKDPANWELASLSPAGYP-EANLNFTGSAEGQNVSFNFGMSSDNAT 340 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 T+ + A+ AT + + ++L + + ++ Q+ Sbjct: 341 WDTSGGITSLAD---------ITAATDYSDLPSFSDYTLETGATTSYSDSSSATYDIAQD 391 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 GY G LVS +++++G ++GNY+N Q+ L Q+ LA+F N GL +EG ++ AT SG Sbjct: 392 GYPTGSLVSVEVDENGILIGNYTNSQSIELFQLGLASFTNESGLKAEGGTLFRATTDSGE 451 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A++GTAG+ FG++ + ALE SNVDL+ ++ +I+ Q +YQ+N++ + T D +L T ++L Sbjct: 452 AIIGTAGSSGFGSVVSNALEGSNVDLASQMTELIIIQSSYQANSKVVTTADTLLQTAISL 511 Query: 402 R 402 + Sbjct: 512 K 512 >UniRef50_UPI0001C35D09 hypothetical protein ChatD1_21894 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35D09 Length = 664 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 37/220 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + AVSG+ A T LDVIGNNIAN TYGFKS A F D+F Sbjct: 4 SLYSAVSGMKAHQTKLDVIGNNIANVNTYGFKSSRARFQDVFYQTLQSAAGGDNNKGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 S+VG G ++ GI D + +TGR LDVAI+ GFF+++D++G++FY+R G LD Sbjct: 64 ASQVGYGSQLGGIDLDMSRSALQSTGRPLDVAIAGEGFFQVMDADGNIFYTRAGNLMLDS 123 Query: 105 N-RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPN-----------------TLMAA 146 N NLV+ G + G +G P ++ +++IP T+ + Sbjct: 124 NSGNLVDSNGYTVLG--VSGDPLGKAPSSDKIHLNIPTKSSGLASKTLTINGTQFTITSE 181 Query: 147 KTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTV 186 K TT A++ I + D LP+ + + +D + +V V Sbjct: 182 KATTDANVSITFKAEDNLPSGSDIVVNPSDINDSSITVHV 221 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 1/173 (0%) Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSL-SFLNSMQQNTGANNIVATTQNGYKPGDLV 289 + N ++ A+ + T + + N +G + T+ G Sbjct: 491 DINTAFLNADEADKTYASFVPKDHAGTITAATQSNDAGLGSGTFTLENGTEGGAISLSGA 550 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 S I +G + + ++ +G+I L F N GL G++ + AT +SG A AG Sbjct: 551 SIAILGNGIIEATHPDKGKIQIGRIDLVTFENPYGLEESGNSYFRATSNSGEAKACQAGE 610 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G L +LE SNVD+S E +MIV QR +Q+N++ I D IL LVNL+ Sbjct: 611 DGTGALKTSSLEMSNVDISTEFSDMIVTQRGFQANSRIITVSDSILEELVNLK 663 >UniRef50_Q5HS69 Flagellar hook protein n=15 Tax=Campylobacter RepID=Q5HS69_CAMJR Length = 845 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 19/242 (7%) Query: 180 KKGSVTVFDSQGNAHDMSVYFV-----KTGDNNWQV--YTQDSSDPNSIAKTAT-----T 227 + ++DS G+ H + V FV + G N WQ+ + ++ N+ + T T Sbjct: 603 FSAGLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPTNIIVGT 662 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNG 282 FN +G+L + + A LSF + + + A+ + +G Sbjct: 663 ARFNNDGSLANYTPKTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDG 722 Query: 283 YKPGDLV--SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 Y G+L + +++D G ++G ++N +T + +I +A+ ANN GL G N++ T +SG Sbjct: 723 YTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSG 782 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 ++G AGTG G + ALE SNVDLS+ L +I+ QR YQ+N++TI T DQ+L TL+ Sbjct: 783 AIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQ 842 Query: 401 LR 402 L+ Sbjct: 843 LK 844 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 107/269 (39%), Gaps = 20/269 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNI+N T GFK A F MF+ + Sbjct: 4 SLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGGSN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLD 103 ++GLGV V+ T+ + G+ T + DVAI+ +GFF + D G Y +R+G FKLD Sbjct: 64 PLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDFKLD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N VN G + G+ TI +P NI I P + A +T +++ NLNS Sbjct: 124 AYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLNSGL 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + T + + + + + + Y D+ + Sbjct: 184 NIGTSSRNLYALDSVHGWNNKTQRPEDENDTGTTQFYTTSKNSVEVTEKGVDAGSLFNAN 243 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAIN 251 T L + G V A A N Sbjct: 244 GTGLNLR-DGQGIWVSYADAKFTTDKPAN 271 >UniRef50_B9KEI8 Flagellar hook protein FlgE n=1 Tax=Campylobacter lari RM2100 RepID=B9KEI8_CAMLR Length = 814 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 118/306 (38%), Gaps = 26/306 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNIAN T+GFK A F+ + + + Sbjct: 4 SLWAGVSGLQAHQYAMDVEGNNIANVNTFGFKYSRADFSTLMSQTSKIATAPDGNLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLD 103 +VGLG V T+ + G T + D+AI+ +GFF + + G+ F++R G FK D Sbjct: 64 PMQVGLGAGVNSTTRIHSQGNIQTTDKNTDMAINGDGFFIVSNDGGTTQFFTRAGDFKTD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ I + T+I I P M A+ +++ S+ NL+S + Sbjct: 124 AVGNFVDNNGYTVQGWNYNQETGQIDSSKSVTDIVIPPGMSMPARPSSSVSLTANLDSGN 183 Query: 163 PLPTV----TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 L T P A ++ +K + T D H Y D Sbjct: 184 TLGTNASAKRPIYALDSLHGGRKDTGTTIDENDTGHT-EFYTTSKSGAQVTEKGVDMGVV 242 Query: 219 NSIAKTATTLEFNAN--GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 + L + D +N +PA ++ G + ++ Sbjct: 243 FNAQGEGLNLRDGQGIWVSYADAKHTSNATMATDLPTDPAQWTNGNHTFWGYKDGGDAVL 302 Query: 277 ATTQNG 282 T NG Sbjct: 303 DITING 308 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 86/315 (27%), Positives = 132/315 (41%), Gaps = 26/315 (8%) Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 +V G P G T + ++ T +A + N N+ + Sbjct: 505 VVESDGRFKITNPTGGKDMTFKVTGFSDEVNKIATNDKFTAMFSA-LDGNFNAGNNEKYS 563 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-----GDNNWQVYTQD-------- 214 S S+ +FDS G H+++V F K G W + Sbjct: 564 QDMYLSA-----HTASIEIFDSLGTRHELTVQFTKQSKTADGGAEWSIIISVPEPAEINF 618 Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQN 269 S D L F +G+L TG L F + + Sbjct: 619 SGDGAPGNIVVGNLRFGNDGSLQSYTPNVLNFTGNNGSKPDQVIKLDFGTTGGFDGLTSY 678 Query: 270 TGANNIVATTQNGYKPGDLV--SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 + +GY G+L + + +++G + G ++N +T L ++ LA F NN GL Sbjct: 679 DKDSATTKQETDGYTGGNLKPDALRTDENGYIYGEFTNGKTLALAKVALATFPNNMGLEE 738 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 G+N++ AT +SG A +G AG G G L A+E SNVDLS+ L +IV QR YQ+N++T Sbjct: 739 MGNNLYKATANSGTATIGHAGEGGRGGLKGSAIEMSNVDLSRALTELIVIQRGYQANSKT 798 Query: 388 IKTQDQILNTLVNLR 402 I T DQ+LNTL+ L+ Sbjct: 799 ITTSDQLLNTLLQLK 813 >UniRef50_B2JJ19 Flagellar basal body FlaE domain protein n=6 Tax=Burkholderia RepID=B2JJ19_BURP8 Length = 501 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 104/275 (37%), Positives = 145/275 (52%), Gaps = 14/275 (5%) Query: 138 SIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMS 197 + P L +T T A +S PT F +N+ +Y+ SV V+DS G + Sbjct: 230 NSPIKLGNGETITLAGTPATGDSLTVAPTALAFDPTNSATYSYSTSVPVYDSLGGEQQVD 289 Query: 198 VYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIAT---------- 247 +YFVKT +W VY D N T +F+ +G LV ++ T Sbjct: 290 MYFVKTSAGSWDVYA--GKDGNVSTTKIGTAKFDTSGNLVSTLDSSGNPTSTLFAFNFSI 347 Query: 248 -GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNE 306 + A P +L + Q + + TQ+G+ G L ++ + DG + GNYSN Sbjct: 348 PNSDGSATPQNLTLK-IGGTTQFGSKDGTNSLTQDGFAAGQLTNFTVGTDGIITGNYSNG 406 Query: 307 QTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVD 366 QT LGQ+ LA FAN GL + G+N + AT +SGVA++ G+ N G+L GA E SNVD Sbjct: 407 QTAALGQVALATFANQNGLINLGNNQFQATAASGVAVVAAPGSTNHGSLQGGATENSNVD 466 Query: 367 LSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L+ ELVN+I AQRNYQ+NAQTIKTQ + TL+NL Sbjct: 467 LTSELVNLITAQRNYQANAQTIKTQQTVDQTLINL 501 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 14/281 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M + Q +SGL A+++LDVIGNNIAN+ T GFK G A FADM+A S ++G+G + Sbjct: 1 MGYQQGLSGLAGASSDLDVIGNNIANANTVGFKQGAAQFADMYANSVATAVNNQIGIGTR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + Q+F+ GT + L VAI+ +GFF++ + NG++ YSRNG F+LD+N + N G Sbjct: 61 MSQVEQNFSQGTISTDDIALHVAINGSGFFQMSN-NGALTYSRNGVFQLDKNGYITNADG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP-TVTPFSA 172 L+L GY A I A + +P + T T + +NLN+ D L + Sbjct: 120 LKLMGYAANANG--IINTAGTVPLQVPTANIPPTATKTITAGLNLNAQDALKLGTPSVTF 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 + + V++ D+ + + + + V + D + + ++ Sbjct: 178 TTSTGSLTNNGVSITDATQGTNANTYTITFSSPTAYTVTSSDGTSTTGTYSANSPIKLGN 237 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGAN 273 T+ ATG P + NS + + Sbjct: 238 GETITLAGTP---ATGDSLTVAPTALAFDPTNSATYSYSTS 275 >UniRef50_B8FK43 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK43_DESAA Length = 693 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 7/224 (3%) Query: 183 SVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMA 242 V F S G ++ ++ + +W + D++D + + +++G Sbjct: 472 GVLTFTSDGEVSNVEMWEFNSDGTDWSI---DNADNWTALNPDNSSHISSDGYFYINPSF 528 Query: 243 NNIATGAINGAEPATFS----LSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 T + + + S Q A N GY GDL ++ DG Sbjct: 529 AEDLTSPMELNLGMAYDGTAWVQESLSTTQYASAGNTTYQATTGYGVGDLDGISVSSDGV 588 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 + G+YSN Q + L +I LA F N +GL G N+++AT++SG A+ GT GT+T+ Sbjct: 589 ITGSYSNGQIKPLFRIALAKFNNVQGLQKMGQNMFAATRNSGDAITNKPGTNGLGTITSN 648 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +LE SNVDL+ E V MI QR YQ+N++ I DQ+L ++NL+ Sbjct: 649 SLEQSNVDLANEFVKMITTQRGYQANSKVITVTDQLLQEVINLK 692 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 32/298 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +SG+N ++ VIG+NIAN +T GFKS +F D+ A + ++G G Sbjct: 6 ALFSGISGMNTLGNSMTVIGDNIANVSTVGFKSSRVTFQDVLAQTVSTQSGTGQLGRGAA 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNM 111 + IT F+ G+ +T D+AI GFF + D +++R G+F+ DE+ N VN Sbjct: 66 MGDITGIFSQGSLESTDSATDLAIGGEGFFVVRDPENVNLEYFTRAGEFRFDEDGNFVNP 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G + G+ + + +I + + + T ++ NL+S + Sbjct: 126 SGYLVRGWTLDQKG---NEEGSIGDIILNSFTSPPEATDKVTLITNLDSDGE------DN 176 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 + +AD H + + T ++ + + + +N Sbjct: 177 SLDADVKTASLGTVSLSGDAVNHPIYL-------------TLNNQTAVNTDVSQFAVAWN 223 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 + A+ + A F++ N + + T +G D+ Sbjct: 224 SGAGAWSITHGATEYPAAVISGDAAGFTIDLDNDGTADITGRTGGSLTADGAGSFDIE 281 >UniRef50_A7H673 Flagellar hook protein n=8 Tax=Campylobacter jejuni RepID=A7H673_CAMJD Length = 875 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 19/242 (7%) Query: 180 KKGSVTVFDSQGNAHDMSVYFV-----KTGDNNWQVYTQDSSDPNSIAKTAT-------T 227 + ++DS G+ H + V FV + G N WQ+ + A T Sbjct: 633 FSAGLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINATGEGPNNIIVGT 692 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNG 282 FN +G+L + + A LSF + + + A+ + +G Sbjct: 693 ARFNNDGSLSNYNPRTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDG 752 Query: 283 YKPGDL--VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 Y G+L +++D G ++G ++N +T + ++ +A+ ANN GL G N++ T +SG Sbjct: 753 YPSGNLKPEGIRVDDKGNILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSG 812 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 ++G AGTG G + ALE SNVDLS+ L +I+ QR YQ+N++TI T DQ+L TL+ Sbjct: 813 NIVVGEAGTGGRGEMKTAALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQ 872 Query: 401 LR 402 L+ Sbjct: 873 LK 874 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 19/188 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNI+N T GFK A F MF+ + Sbjct: 4 SLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRGGQN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 ++GLGV V+ T+ + G+ T + DVAI+ +GFF + D G + + +R+G FKLD Sbjct: 64 PLQIGLGVSVSSTTRIHSQGSVQITDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFKLD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSD 162 N VN G + G+ +I P NI I P + A +T +++ NLNS Sbjct: 124 AYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAQSTEVAIKANLNSGL 183 Query: 163 PLPTVTPF 170 + T + Sbjct: 184 NIGTASTP 191 >UniRef50_C4XPF7 Flagellar hook protein FlgE n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPF7_DESMR Length = 518 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 123/310 (39%), Gaps = 34/310 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + VSGL + + GNN+AN T G+KS FADM + GS++G GV+ Sbjct: 3 SIWTGVSGLLTYSQGIATTGNNLANVNTVGYKSSRMLFADMISTMAGGTSDGSQIGTGVQ 62 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQN-GFFRLVD-SNGSVFYSRNGQFKLDENRNLVNM 111 V I G+ + D+AI+ G+F + D +N +Y+R G F D+N NL++ Sbjct: 63 VGSIALQTEVGSLQDASNSTDLAITGERGYFVVKDAANDKTYYTRAGDFNFDKNGNLMSA 122 Query: 112 QGLQLTGYPATGTP-----------PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS 160 G + G+ + T+I+I + + + T T + NL+S Sbjct: 123 TGCNVQGWAVDQDAILKAKRNNVILSEVPTTGTVTDITIKDFTIDPQATGTMEVVTNLDS 182 Query: 161 SDPLPTVTPFSA-------------SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN 207 + + + + + ++ ++DS G AH +VY+ KT DN+ Sbjct: 183 QSSVGELDATDPYFTMFKNYDATNDTPVADSDYQATIKIYDSNGVAHTATVYYSKTSDNS 242 Query: 208 WQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ 267 + Y + + T ++ A G + T + S S+ Sbjct: 243 GKEYWEYMVTVPPEEDGSATTSGTTKAGVLMVGTLTFSAQGVLENQTAFTPNGSDPTSLS 302 Query: 268 QNTGANNIVA 277 T A+ + Sbjct: 303 NWTQASLTSS 312 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 102/192 (53%), Gaps = 8/192 (4%) Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS--------MQQNT 270 N A + T+ F + DG+ + A A A ++ + S Sbjct: 326 NGSALPSQTIAFKTGLSATDGSWNSGSAANAGAIGTNAALNIGYNPSSTLNAVYCTTNYA 385 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 ++ ++Q+GY G++ + ++++G + G+++N QT+ L + LA+F N L G+ Sbjct: 386 TSSYTQTSSQDGYAKGEMTATNVDENGVIWGSFTNGQTKALYVLALADFTNPTDLYRNGN 445 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 N+ S T SG A +G A +G F ++ LE+SNVD++ E+VN+I+ QR +Q+N++ + T Sbjct: 446 NLLSPTTESGKATVGRANSGVFDSIAGNTLESSNVDMASEMVNLIINQRAFQANSKVVTT 505 Query: 391 QDQILNTLVNLR 402 + ++ T + ++ Sbjct: 506 AESLMETALQIK 517 >UniRef50_Q3ADD6 Flagellar basal-body rod protein FlgG n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD6_CARHZ Length = 261 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 12/150 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM---------FAGSKVGLGV 52 + +SGL + +DV+ NNI+N T G+KS +F D+ S VGLGV Sbjct: 4 SLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVGLGV 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNM 111 V+G+ FT G +TGR LDVAI NGFF L D +YSR G F LD++ L+N Sbjct: 64 NVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYLING 123 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPN 141 G ++ G I ++I N Sbjct: 124 HGYRVQ--DVNGADIQINNPEAVVTLTIQN 151 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 25/221 (11%) Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANG---TLVDGAMANNIATGAINGAEPATFSLSFL 263 N++ ++ + + + L N +G G + + + F L Sbjct: 40 NFEDLIYQKTNQSGVYPSYVGLGVNVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDP 99 Query: 264 NSMQQNTGANNIVATTQNGY--------------------KPGDLVSYQINDDGTVVGNY 303 + + + ++GY P +V+ I +DG + Sbjct: 100 VTTRTYYSREGVFYLDKDGYLINGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVR 159 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG--TAGTGNFGTLTNGALE 361 S+ T+ G I L +F N E L G NV+SAT + + T G G L +G LE Sbjct: 160 SDGTTEFAGPIGLMSFKNPETLERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLE 219 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDL+ E MIV QR YQ+NA+ I T DQ+L L+N++ Sbjct: 220 MSNVDLASEFTEMIVTQRGYQANARVITTSDQMLEELLNIK 260 >UniRef50_Q31FL0 Flagellar hook protein FlgE n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FL0_THICR Length = 538 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 85/339 (25%), Positives = 139/339 (41%), Gaps = 57/339 (16%) Query: 5 QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV--GLGVKVAGITQDFT 62 AVSGLNAA+ L VI NN+AN+ T G+KS A F+DMF G++ G GV+V ITQDFT Sbjct: 8 TAVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFSDMFYGAQSTPGNGVRVDSITQDFT 67 Query: 63 DGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNMQGLQLTGY- 119 +GT T+TGR LD+AI +GFF L D G Y+RNG FKLD++ + + +G ++ GY Sbjct: 68 NGTITDTGRDLDMAIDGDGFFILEDRTGKYENVYTRNGSFKLDKDGYVTSQEGNKVQGYL 127 Query: 120 --PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN--- 174 PA T ++I + K+T + IN++ + + Sbjct: 128 LNPALSTERNPVFETTLSSIDLDELNKTPKSTDEMNYDINVDGEENNNVDATQTPIAGIE 187 Query: 175 ----------------------------ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN 206 + + V+D+ G H ++ F K Sbjct: 188 NSVGGDTALAGSALSNIEKLVAPETEVYGGYPDFSTNKIVYDTLGGEHRLTTNFYKR--- 244 Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 + + + + L ++ A T + T + ++ Sbjct: 245 ------------DVVTEANSDLTYDPLTDTYTQGAAGTGNTKYTSWLAQYTME-DYDDAT 291 Query: 267 QQNTGANNIVATTQNGYK---PGDLVSYQINDDGTVVGN 302 Q + + A +G G + + + +G ++ Sbjct: 292 GQWVTSGHREAVPADGTASADAGIIYELRFDTNGNLIDT 330 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 3/218 (1%) Query: 187 FDSQGNAHDMSVYFVKT--GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANN 244 FD+ GN D V N QD+++ T T N V + Sbjct: 321 FDTNGNLIDTREPTVAALATGANSTPTGQDTANNPLDPATWTPTGNQPNMEWVVDSPITG 380 Query: 245 IATGAINGAEPATFSLSF-LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 N A+ S+ M Q G+ N+ TQNGY GDLV DG + Y Sbjct: 381 ANDPLGNPADALGVSIDVDFTKMTQFAGSYNLRGVTQNGYAIGDLVGVYTGKDGVIEARY 440 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 SN ++ + Q+ +ANF + L G ++ + +SG +GT+ +G++ GALE S Sbjct: 441 SNGRSVPVAQLGMANFNDKNALEKLGGQSYAESFASGAVQIGTSERNGYGSINAGALEYS 500 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 NVD + ELV+MI QR YQ++AQ I+T + T++ L Sbjct: 501 NVDTAGELVHMIQTQRTYQASAQVIQTSQTLTQTILQL 538 >UniRef50_C6BXM1 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM1_DESAD Length = 529 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 110/284 (38%), Gaps = 30/284 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SG+ A + + +IGNN+AN T GFK SF D F + +VG GV Sbjct: 6 SMYNGISGIRAHSQAMSIIGNNLANGNTIGFKGARTSFEDSFYSAVNTGGGIGQVGHGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 +A I DF G + +VAI GFF + + +Y+R G F ++ L + Sbjct: 66 IASIYGDFKQGPFEPSSEATNVAIGGKGFFTVRHPDTDGTYYTRAGNFIFNKQGVLTDPH 125 Query: 113 GLQLTGYPATGTPPTI--QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G + G+ + PT+I + T+ +M +NL+S Sbjct: 126 GYVVQGWKVNPNSESGKPDIIGTPTDIKLDRFQSPPVRTSEIAMNVNLSSKAEDKCNVTG 185 Query: 171 ---------------SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS 215 AD Y + ++ FD G +HD+++YF D+ Sbjct: 186 QPFFSLHQTWNGKNNPPIPADRYAFQNTIKTFDESGTSHDLTIYFDPVKDSTVTT----D 241 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 + N + + T+ +G ++G + + TF+ Sbjct: 242 AAGNRVYEFIVTVPPGEDGRTINGTALKTTSAAGLLMTGTMTFN 285 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 9/199 (4%) Query: 204 GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL 263 D + T D N + A+ + V +AN + + Sbjct: 339 TDPDANPITLDFGLSNGSNPPTWSTPTPADASAVGNTLANIPNFTTPKRSASYS------ 392 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 N + +QNGY G L + +++ DG V G YSN Q L + LANF N Sbjct: 393 ---TSYDTGNARNSQSQNGYGAGFLQAVEVDRDGVVTGRYSNGQVLDLYVLTLANFNNQY 449 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL EG N++S+T+ SG AL G AGTG G++ + LE SNVD+ E+V +I QR +Q+ Sbjct: 450 GLRREGGNLFSSTRDSGPALTGRAGTGPLGSIASNKLEQSNVDVGDEMVKLITTQRGFQA 509 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ I T DQ+L L+ L+ Sbjct: 510 NSKAITTADQLLGELIQLK 528 >UniRef50_C4XMS5 Flagellar hook protein FlgE n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMS5_DESMR Length = 550 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 127/338 (37%), Gaps = 55/338 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL A +T + IGNN+AN TYGFK F D+ + ++G GV+ Sbjct: 8 SMWSGVSGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIGRGVR 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRL-----VDSNGSVF--------YSRNGQF 100 V I D++ G T LD+AIS NGFF + V SNG + Y+R G F Sbjct: 68 VGTIVSDYSQGGLETTSENLDMAISGNGFFMVKQKSQVGSNGKMLNTGNTTTYYTRAGDF 127 Query: 101 KLDENRNLVNMQGLQLTGYPATGTP-----------PTIQQGANPTNISIPNTLMAAKTT 149 D + LV QGL + G+ + +I + AK T Sbjct: 128 SFDSDGYLVTPQGLAVQGWKVDQDRIDAASASGTVLSQVPVTGEIQDIRLTQFTSPAKAT 187 Query: 150 TTASMQINLNSSDPLPTVTPFSAS-----------------NADSYNKKGSVTVFDSQGN 192 ++ +M L+S + + +Y + ++ V+D G+ Sbjct: 188 SSVTMVTQLDSDTTTQNTRTAGTNYYYAMTEQWDGTASPAMPSTAYGYQSTLKVYDENGS 247 Query: 193 AHDMSVYF----VKTGDNNWQ-VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIAT 247 H ++VY+ + G + W+ T D S+ + + L+ ++ Sbjct: 248 PHTLTVYYDKVVSEDGKDYWEYCVTCDPSEDGRVDSAGNPIAGTETAGLLMTGTMTFDSS 307 Query: 248 GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKP 285 G++ T S A+ +NGY Sbjct: 308 GSLENMSAYTLQASNATG-GPFDATQWAAASVKNGYPV 344 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 15/250 (6%) Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT-- 224 F +S + ++ ++ G D + + + N + V+T + + + T Sbjct: 301 TMTFDSSGSLENMSAYTLQASNATGGPFDATQWAAASVKNGYPVFTANFKSVSDASFTDS 360 Query: 225 ------------ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 + T F T + A + P+T ++ + T + Sbjct: 361 PNALNIAFNVGISNTTGFQPGATGTLLSAAAAHDPDELVSFNPSTTKVNSTVTTSYATSS 420 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 + + + +QNGY G L S ++ DG + G +SN QTQ L + LANF N +GL+ +G N+ Sbjct: 421 STVFS-SQNGYTSGLLTSVSVDSDGILTGTFSNGQTQKLWALALANFTNLQGLSRQGSNL 479 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 ++AT SG A TG+ G+++ LE SNVDL+ E+V+MI+ QR +++N++TI T D Sbjct: 480 YAATLDSGQGTTNRANTGSVGSISGNTLETSNVDLATEMVSMILTQRGFEANSKTITTVD 539 Query: 393 QILNTLVNLR 402 +L+ ++ L+ Sbjct: 540 SMLSEVIQLK 549 >UniRef50_B4U878 Putative uncharacterized protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U878_HYDS0 Length = 583 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 18/272 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----------- 50 +F A+SGL+A L +I NN++N+ T G+K+ F ++ A VG+ Sbjct: 4 SFYNAISGLDAFNNYLSIISNNMSNADTIGYKAVNPIFENVVANVNVGINTLTDTLKSTI 63 Query: 51 ---GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDEN 105 GV V ++ G TG D+AI NG F L D G+VFY+RNGQF + + Sbjct: 64 YGAGVIVDSTQLNWQLGNFEQTGNNTDLAIQGNGLFILQDPANAGNVFYTRNGQFTISQQ 123 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 +VN GL+L GY + + P I IP A T NLNS+ P Sbjct: 124 GYMVNPDGLKLLGYKVDQSGSVVGTSLQPIYI-IPQQPPKATDLITYQQPTNLNSTAPS- 181 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA 225 F+ N ++N + ++T FD+ GNA + YF KTG N W ++ + T+ Sbjct: 182 ITQAFNPLNTATFNYQNTLTTFDTLGNAIEGDTYFQKTGPNTWNYIYAENEKAAYYSNTS 241 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPAT 257 + + + + N P Sbjct: 242 GNVLYRNVAGTWQSTTISGGSLTWYNITTPPN 273 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 9/295 (3%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 N G +T + T + T + + + + Sbjct: 293 TNSSGSMVTDWVVDVTTSSTTISYVVNPTKPAGGTQEWDTIGSGAANGFVPYNLSSGIGV 352 Query: 169 PFSASNADSYNKKGSVTVFDSQGN-AHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 P ++ Y + + GN ++ ++ Y + +P + Sbjct: 353 PIYTGSSTIYAATALLNFDPNTGNITTSSTIGVYTYPTSSSYEYFIGAQNPLVLGDGNIV 412 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 N+ + G +A GA + + NS ++ + +Q+GY G+ Sbjct: 413 GNLNSASSQSTGGLAFGQLIGAKPTTSTSAGIID--NSYITQDASDFTITASQDGYSLGN 470 Query: 288 LVSYQI-NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 LV+ + + DGTVVG YSN Q+ L ++ LA F + L +G N++++ + Sbjct: 471 LVNVYVLSSDGTVVGVYSNGQSTPLYRVALAQFQDPNELIEKGSNLYTSIY---TPTILL 527 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G+ + + +G LE SNVD+++ + ++ A+R+YQ+NA+ + + D +L +N+ Sbjct: 528 PGSADI--IQSGMLEQSNVDIAQAYIQLVTAERSYQANAKVVTSSDNVLQATLNM 580 >UniRef50_C9R9Y6 Fagellar hook-basal body protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9Y6_AMMDK Length = 266 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 17/155 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------SKVGLGV 52 + VSGL +DVI NNIAN T GFK+ A+F D+ + ++VGLGV Sbjct: 4 SLFSGVSGLRVHQIRMDVIANNIANINTTGFKAARANFQDILSQTLGRSAVNTTQVGLGV 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRL--VDSNGS----VFYSRNGQFKLDENR 106 +A I T G TGR LD+AI NGFF + VDS+G+ Y+R+G F +D++ Sbjct: 64 SLAAIDNIMTQGALQTTGRALDLAIEGNGFFVVKPVDSSGNSVNHPLYTRDGTFYIDKSG 123 Query: 107 NLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPN 141 +VN QG +L + I +ISI + Sbjct: 124 YIVNAQGYRLQ--STSNDNIQIADPDKIVSISIGS 156 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 9/190 (4%) Query: 220 SIAKTATTLEFNANGTLVDGAMANN-IATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 A L NG V + ++ + TF + + N + +T Sbjct: 78 QTTGRALDLAIEGNGFFVVKPVDSSGNSVNHPLYTRDGTFYID-KSGYIVNAQGYRLQST 136 Query: 279 TQNG---YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 + + P +VS I DG + S+ T++ I L F N E L G N+W Sbjct: 137 SNDNIQIADPDKIVSISIGSDGVISVVKSDG-TKITYNIGLVTFKNPESLQRVGANLWDV 195 Query: 336 TQS---SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 T + G GT G + +G LE SNVDL++E NMI+ QR YQ+NA+ I T D Sbjct: 196 TPNVTDPATPTPGAPGTDGRGYIRSGFLEMSNVDLAQEFTNMIITQRGYQANARVITTSD 255 Query: 393 QILNTLVNLR 402 ++L LV+L+ Sbjct: 256 ELLRELVDLK 265 >UniRef50_B8J087 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J087_DESDA Length = 808 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 43/272 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + +VSGL + ++V+GNNIAN +T GFKS F D S++G G Sbjct: 6 SMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGAS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDENRNLVNMQ 112 V I DF+ G+ +T D+AI NGFF++ N ++Y+R G F +++R L N + Sbjct: 66 VYAILGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPE 125 Query: 113 GLQLTGYPATGTPP------------------TIQQGANPTNISIPNTLMAAKTTTTASM 154 G L G+ PT+I + + + + TT + Sbjct: 126 GYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQTTNVTF 185 Query: 155 QINL--------NSSDPLPTVTPFSASNADS--------YNKKGSVTVFDSQGNAHDMSV 198 + L +S+ P F +A S Y + S+ V+D G H ++V Sbjct: 186 TMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGTHTLTV 245 Query: 199 YFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 Y+ + D + T E+ Sbjct: 246 YYDQVDARKTDSNGNTIYDIKGLPAGYTIYEY 277 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 96/202 (47%), Gaps = 1/202 (0%) Query: 201 VKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSL 260 T + D+ NS + TT+ +GT G T Sbjct: 607 AYTAPTDASRPVADTETANSSLASLTTMS-RVSGTSPTGVPVFENVINYGTTIPTMTAVE 665 Query: 261 SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 + NT + + TQ+GY G L + I++ G V G YSN +T L QI L +F Sbjct: 666 RQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPLYQIALYDFQ 725 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 N++GL EG N++SAT SG LG AG FG +E SNVD++ E V MI QR Sbjct: 726 NHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEFVQMISTQRG 785 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 +Q+N++ I T D +L T++ ++ Sbjct: 786 FQANSKGITTVDTMLETVIGMK 807 >UniRef50_B9K8L8 Flagellar basal-body rod protein FlgG n=106 Tax=Bacteria RepID=B9K8L8_THENN Length = 268 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 18/134 (13%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------------- 43 ++ A +G++A LD I NN+AN T G+K A F D+ Sbjct: 10 ISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATSTL 69 Query: 44 -AGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 G VG GV+ A T+ FT G TG LD+AI+ +GFF++ +G + Y+R+G FK+ Sbjct: 70 PTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSFKV 129 Query: 103 DENRNLVNMQGLQL 116 D +V GL L Sbjct: 130 DSEGRIVTSNGLLL 143 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 21/213 (9%) Query: 211 YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ--- 267 Y +++ P + T T + +G +++ Q Sbjct: 55 YVKNAGTPTAATSTLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQL 114 Query: 268 -------QNTGANNIVA----TTQNG-------YKPGDLVSYQINDDGTVVGNYSNEQTQ 309 G+ + + T NG P + VS ++ DG V + Q Sbjct: 115 QDGRIAYTRDGSFKVDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQ 174 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 LG I L F N GL S GDN++ AT +SG + G G FG + G LE SNVD+ + Sbjct: 175 QLGTITLVRFVNPSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVR 234 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E+V+MI AQR Y+ N++ I+T D++L T N++ Sbjct: 235 EMVDMITAQRAYEFNSRVIQTADEMLRTATNVK 267 >UniRef50_A9BEX9 Putative uncharacterized protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEX9_PETMO Length = 702 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 91/337 (27%), Positives = 146/337 (43%), Gaps = 50/337 (14%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 + LTG TG M + A +LN+ Sbjct: 372 ITSGDYTLTGLRLTGASDADTIDGQGFTGLKSVREMIQPPSGGAIRFTDLNNPTNFSEAN 431 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA--- 225 S S S V+DS GN ++ + F K N W + TA Sbjct: 432 YISPS------VTTSTVVYDSLGNPYNTYLKFTKIDANTWYWKAELEDGTPLYKSTADGQ 485 Query: 226 -------TTLEFNANGTL---------------------------------VDGAMANNI 245 + F++NG + + A+ ++ Sbjct: 486 LLDDSAEGVIAFDSNGNIAATQWKINPDGTIDQTIGDGDDGAAGFWFDPAELGAALNPSV 545 Query: 246 ATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSN 305 + GA P S++F + Q N+I T Q+G G L S+ IN +G ++G+++N Sbjct: 546 DPQSAAGAGPVNVSINFQE-LSQFFAENSIAVTEQDGNAQGTLESFAINTNGQIIGSFTN 604 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 T LGQ+ LA F N EGL++ G+++++ + +SG+ +G +G G G++ GALE SNV Sbjct: 605 GLTAPLGQVALATFNNPEGLSATGNSMYAMSSNSGLPQIGVSGVGGRGSINPGALEMSNV 664 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 DL++E NMI+AQR +Q+N+++I T D ILN LVN++ Sbjct: 665 DLAEEFTNMIIAQRGFQANSRSITTADAILNELVNIK 701 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 26/265 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++GL LD++ NNIAN T G+K A+F + Sbjct: 4 SMYSGITGLRNFQDQLDIVANNIANVNTVGYKGSRATFQTTLFQTLSAGNAPQNQLGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG ++A I + T G+ +TG+ D+ I GFF L D G +Y+R G F D Sbjct: 64 PMQIGLGSQLASIDKLMTQGSPMSTGKATDLMIQGEGFFILSDGIGQ-YYTRAGNFTRDY 122 Query: 105 NRNLVN-MQGLQLTGYPA---TGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLN 159 N V+ G++L G+ A TI +I I +MAAK T+ + NLN Sbjct: 123 NGFFVDPASGMKLQGWTAKIDQEGNRTIDTNDPIGDIQISSGQVMAAKQTSFVRLAHNLN 182 Query: 160 SSDPL-PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 + + T ++ ++ K S S+ N + + + + D Sbjct: 183 AGAGIQDTTIVVKSTTGENIPVKFSFKRDMSEENKDKNVYNWTASVVGSEYKFAVDDGSG 242 Query: 219 NSIAKT--ATTLEFNANGTLVDGAM 241 N + + +E + G ++ Sbjct: 243 NLTSTNQISGKVELDDTGNVISWVN 267 >UniRef50_D2L5W2 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5W2_9DELT Length = 518 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 125/327 (38%), Gaps = 48/327 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA---------GSKVGLGV 52 A VSG+ + + + NN+AN+ T G+KS FADM + S++G+GV Sbjct: 3 AIWTGVSGMLSYSQGIANTSNNLANTNTVGYKSSRMLFADMISELAGSTTDTNSQIGMGV 62 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQN-GFFRLVDS-NGSVFYSRNGQFKLDENRNLVN 110 +V ++ G + +D+AI G+F + D + +Y+R G F + + LV+ Sbjct: 63 QVGTVSMSTGVGAIATGDQSMDMAIDGEHGYFTVKDPVSDKTYYTRAGDFNFNTDGYLVS 122 Query: 111 MQGLQLTGYPATGTPPT-----------IQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 G ++ G+ T + +PT+I I + + A+ T + SM NL+ Sbjct: 123 PTGNRVQGWAVDQAAVTQAERTGSVLPEVPVTGDPTDIRITDFTLPAQATGSVSMITNLD 182 Query: 160 SSDPLPTVTPFSA------------SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN- 206 S + + + + V+D++G AH ++V + K D Sbjct: 183 SLTDPGILDATDPYCSMFKSYDAANTPPATAAYTSDIKVYDAEGGAHSLTVNYSKVTDTG 242 Query: 207 -----NWQVYTQDSSDPNSIAKTA--------TTLEFNANGTLVDGAMANNIATGAINGA 253 + V + D +S+ TL F+A G L + + + Sbjct: 243 GKEYWEYMVTVPPADDGSSVTGGTSKAGVLMIGTLTFSAQGVLENQTAFTPTGGDPTDLS 302 Query: 254 EPATFSLSFLNSMQQNTGANNIVATTQ 280 L Q + ++ + Sbjct: 303 SWTQAPLDSTGVPQMSATFKSVSNGSV 329 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 7/222 (3%) Query: 181 KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGA 240 + DS G + + + + T S + + ++ + Sbjct: 303 SWTQAPLDSTGVPQMSATFKSVSNGSVLSSQTMGFKTGLSASGASWNPNGPSSAADIGTL 362 Query: 241 MANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVV 300 A N + ++ A +Q+G+ G L S ++++G V Sbjct: 363 AAANAGFDPSSTRNAVA-------CTTSYATSSYTQAQSQDGFASGTLNSTSVDENGVVS 415 Query: 301 GNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGAL 360 G +SN QT+ L + LA+F N L EG+N+ SAT SG A G A +G + ++ +L Sbjct: 416 GTFSNGQTKDLYVLALADFRNPTDLRREGNNLLSATTESGAATTGRANSGIYDGISGYSL 475 Query: 361 EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E+SNVD++ E+VN+I QR +QSN++ + T D ++ + ++ Sbjct: 476 ESSNVDMATEMVNLITLQRAFQSNSKVVTTADTMMEKALEIK 517 >UniRef50_C0GT28 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT28_9DELT Length = 755 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 126/319 (39%), Gaps = 35/319 (10%) Query: 119 YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSY 178 Y GT + +P I P+ + TT + + + + A ++ Sbjct: 436 YDENGTSYELTNYFDPVEIDDPSGNKHWEFMTTVNPEHDNREGMEDSEKRGVLMTGALTF 495 Query: 179 N----------KKGSVTVFDSQGNAHDMSVYFVKT---------GDNNWQVYTQD----S 215 N V+D F DN + V+T + Sbjct: 496 NPGGELIDQSAYTLGTEVYDDDTGEPIAGGDFASDLSNWSLSDFSDNGYPVFTPNFLGIE 555 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 + A+ A +E N G A E +F N + Sbjct: 556 GQNFTGAEGAQNIEMNFGLRNQTGNWEAGSAESPAELTEFGNTDFNFDNIAEFEETRREA 615 Query: 276 VA------------TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 A Q+GY G L + +I+ +G + G Y N Q L + LA+F N + Sbjct: 616 QASTQYSSSSTTLMQNQDGYTTGFLQNIEIDRNGVLTGRYDNGQVMDLYALTLADFHNEQ 675 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL EG N++S T+SSG A+ G AGT G +++ +LE SNVDL+ E V +I ++ +Q+ Sbjct: 676 GLRKEGGNLFSETRSSGPAMTGLAGTRGLGEISSNSLEMSNVDLATEFVKLIQTEKGFQA 735 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++TI+T D +L ++ ++ Sbjct: 736 NSKTIQTTDTMLGIIMQMK 754 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 22/198 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL + IGNNI+N +T GFK F D + +VG GV Sbjct: 6 SMYTGVSGLKGHGEKMGTIGNNISNVSTVGFKGSRMHFEDFMSQDINTGAGVGQVGRGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-DSNGSVFYSRNGQFKLDENRNLVNMQ 112 V + DF+ G+ +T DVAI +GFF++ Y+R G F+ DE LV+ Sbjct: 66 VGAVMNDFSQGSLESTNEATDVAIGGDGFFQVSARGTDENLYTRAGNFRFDEEGYLVDPN 125 Query: 113 GLQLTGYPATGTPPTIQQG-------------ANPTNISIPNTLMAAKTTTTASMQINLN 159 + G+ PP + P +I + + + T +NL+ Sbjct: 126 NNVVQGWEVREDPPGVADDDEIIQTETGVEIQGAPGDIRLDDFQSPPEQTRKVDKMVNLD 185 Query: 160 SSDPLPTVTPFSASNADS 177 S + + D Sbjct: 186 SRSEARSSNASTPLTGDD 203 >UniRef50_Q310Y8 Flagellar hook protein FlgE n=3 Tax=Desulfovibrio RepID=Q310Y8_DESDG Length = 527 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 52/318 (16%) Query: 17 LDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVKVAGITQDFTDGTTTN 68 ++V+GNNIAN T GFK F D + +VG GV + I DF+ G+ Sbjct: 1 MNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQVGRGVGIGTIYGDFSQGSFET 60 Query: 69 TGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPT 127 T D+AI GFF + +Y+R G F+ D+ LV+ G L G+ P+ Sbjct: 61 TTEATDLAIGGRGFFAVSPKGEETAYYTRAGNFRFDKEGYLVDPHGYVLQGWQIETPRPS 120 Query: 128 --------------IQQGANPTNISIPNTLMAAKTTTTASMQINLN--------SSDPLP 165 I+ P +I +P K T+ ++ NL+ ++ P Sbjct: 121 LATSTAGSVSSTSKIKGAGVPKDIQLPGFTAEPKHTSNVTIISNLDDASGGDNSTNAANP 180 Query: 166 TVTPFSASNA--------DSYNKKGSVTVFDSQGNAHDMSVYFVK----------TGDNN 207 F++ + +S+ + ++ V+D G AH++++Y+ + +G + Sbjct: 181 MFALFNSWDGTAEPPLSENSFAYQTTIKVYDEGGTAHNLTIYYDQVASDTISGEGSGQKH 240 Query: 208 WQ-VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 W+ + T D +D A G L+ G + + + I+ + S Sbjct: 241 WEYIVTMDPADEQRSINGIDFKGTPAAGMLMAGTLTFDSSGQLIDQSAFTPGS--SATGS 298 Query: 267 QQNTGANNIVATTQNGYK 284 ++ N + NGY Sbjct: 299 MKDLSNWNPTTFSTNGYP 316 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 3/243 (1%) Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 D SA+ + + T F + G ++ F + ++ D + I Sbjct: 285 DQSAFTPGSSATGSMKDLSNWNPTTFSTNGYPMFVA-NFSGISNASYVTPNPDPAAQPYI 343 Query: 222 AKTATTLEFNANGTLVDGAMANN--IATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 + L+ + T ++N + T N + ++ +G+++ Sbjct: 344 MELNLGLKNSDPSTWASAGVSNASLVGTNVANLPSLGNQAERQSSATTSFSGSSSTPTRY 403 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+GY G L + + DG + G YSN L QI L +F + + L EG N++S + +S Sbjct: 404 QDGYTFGFLQNVTVTRDGILQGRYSNGAVLDLYQITLYDFQSKDNLRREGGNLFSESNAS 463 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G+A G A +GT+ + +LE SNVDL+KE VNMI QR +QSN++ I T D +L ++ Sbjct: 464 GLAAPGPANANGYGTVNSNSLEQSNVDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVI 523 Query: 400 NLR 402 ++ Sbjct: 524 QMK 526 >UniRef50_A4U4W8 Probable: Flagellar hook protein FlgE, gene: FLGE OR GSU0419 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4W8_9PROT Length = 605 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 4/270 (1%) Query: 136 NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHD 195 NI+ P T A T ++ T S+S +K + VFDS N+H Sbjct: 336 NITAPATFAAEPVTINWDDGAYGAATADSATTVNLSSSKPSIPMQKIYLEVFDSNFNSHT 395 Query: 196 MSVYFVKTGDNNWQVYTQDSSDPNSIA-KTATTLEFNANGTLVDGAMAN-NIATGAINGA 253 +++ F ++G N W ++ S+ + A T + FN +G +V G+ A+ ++ + Sbjct: 396 VTLGFERSGINTWYMHVLPGSNATTGANPTPIDVTFNEDGKMVTGSPASLALSWTSGTEV 455 Query: 254 EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 AT +L + M Q G +I +GY G L+S N+ G + G ++N +T+ L + Sbjct: 456 GTATVALDM-DGMTQYDGDLHIDNIATDGYGSGTLISSGFNERGEMYGQFTNGKTRALFK 514 Query: 314 IVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG-NFGTLTNGALEASNVDLSKELV 372 + +A F L N++ ++ +G + + + +LEASNVD+ +E Sbjct: 515 LPIAQFVAENNLEPISGNLFRRSREAGDITVSSVENAVGAPRFSPSSLEASNVDIGQEFT 574 Query: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 MIV Q+ Y +NA KT D++ +L+ Sbjct: 575 KMIVTQKAYTTNATVFKTADEMTTVARDLK 604 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 103/275 (37%), Gaps = 46/275 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG----------LG 51 A + A + + A + ++ I NI+N T G+K F + + SK G G Sbjct: 79 AMNNASTAMMATSWDMGSISQNISNVNTTGYKRKETLFKTVMSESKAGPSTHSGKLNIFG 138 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRL---------------------VDSNG 90 VK A GT T + D+AI+ GF + VD Sbjct: 139 VKTADRYHIEQQGTITGSNWNTDLAINGRGFLLVAPPSTTTSGTTVSSNAPTSASVDDPA 198 Query: 91 SVFYSRNGQFKL----DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAA 146 SV Y+R+G F ++ + G + G+ A T Q GA ++P T M Sbjct: 199 SVLYTRDGSFHFVAGPNQEKYFTTAGGNYVLGWMADDTGTIDQTGALTPVYTLPETTMEG 258 Query: 147 KTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN 206 + TT AS+ N+ L + N + T D G + +++ + + Sbjct: 259 RETTEASVFANIPRDATL-----------SASNFNSTSTFTDPLGASQTLTLNWSRVDAT 307 Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAM 241 W V + +++ A T+ ++NG + A Sbjct: 308 TWTVTPSVPAAVGAVSSAAMTVTMDSNGNITAPAT 342 >UniRef50_A4J757 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J757_DESRM Length = 856 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 13/191 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------KVGL 50 + +SG+ T +DV GNNIAN T G+KS +F D + + +VG Sbjct: 4 SLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQVGS 63 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 G+ V ++ +FT G +TGR LD+ I NGFF + D FY+R G F +D+ LVN Sbjct: 64 GMSVGSVSNNFTQGPMQSTGRTLDLGIQGNGFFVVSDGTNE-FYTREGIFFVDKQGFLVN 122 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 +GL++ A + + NI + T N +S + Sbjct: 123 GEGLRVQSL-AGQDIRVLNGPVSTINIGPDGAIAGTNTAGQPLKFSNNDSQAIITPAQQS 181 Query: 171 SASNADSYNKK 181 S A Y Sbjct: 182 SIKGAPKYTTP 192 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 54/95 (56%) Query: 308 TQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDL 367 +G I L F N EGL G N++ + SSG G A FGT+ +G LE SNVDL Sbjct: 761 QDTMGVIKLVTFQNPEGLEKAGRNLFGTSVSSGEPKQGQANQSGFGTINSGYLEMSNVDL 820 Query: 368 SKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++E NMI QR YQ+NA+ I D +L L+ L+ Sbjct: 821 TEEFTNMITTQRGYQANARVITVSDSLLEELIQLK 855 >UniRef50_C8W1G5 Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G5_DESAS Length = 263 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 6/156 (3%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGI 57 + VSG+ T +DVIGNNIAN T G+KS F D+ AG +V GV +AGI Sbjct: 4 SLYSGVSGMKNHQTRMDVIGNNIANVNTTGYKSSRVQFKDVLGQTIAGGQVASGVTIAGI 63 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQGLQ 115 +DFT G+ T T D+ I NGFF + D ++Y+R+G F +D+ LVN G + Sbjct: 64 NKDFTQGSQTATENSTDLYIHGNGFFIVQDPGDPSILYYTRDGSFHVDDTGQLVNSLGYK 123 Query: 116 LTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTT 151 + + + NI + + +T Sbjct: 124 VCSSDGSTEIDPFTVPLDSINIDMNGKISYCTGGST 159 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%) Query: 219 NSIAKTATTLEFNANGTLVDGAMANN-----IATGAINGAEPATFSLSFLNSMQQNTGAN 273 + + +T L + NG + + G+ + + S + + G+ Sbjct: 72 QTATENSTDLYIHGNGFFIVQDPGDPSILYYTRDGSFHVDDTGQLVNSLGYKVCSSDGST 131 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT-QLLGQIVLANFANNEGLASEGDNV 332 I T L S I+ +G + T + GQI LA F + L ++G+N+ Sbjct: 132 EIDPFTV------PLDSINIDMNGKISYCTGGSTTPEDGGQIGLAMFNDLNRLINKGNNL 185 Query: 333 WS-----ATQSS--GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 + T S + G G+ GT+ + LE SNVDL+ E NMI+ QR YQ+N+ Sbjct: 186 YQYDNKPNTDGSDPAEPIFGAPGSIGLGTVISNNLEMSNVDLTNEFSNMIITQRGYQANS 245 Query: 386 QTIKTQDQILNTLVNLR 402 + I T D++L L+ L+ Sbjct: 246 KVITTSDEMLQELIGLK 262 >UniRef50_D1TKK3 Putative flagellar hook protein FlgE n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKK3_9BURK Length = 510 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 106/271 (39%), Positives = 143/271 (52%), Gaps = 23/271 (8%) Query: 150 TTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ 209 T + +S P T F+ +++ +YN S T +DS G + +++YF KTG W Sbjct: 244 TFSGTPATNDSYTVAPNPTAFNQNSSTTYNYSTSTTAYDSLGGSQTVNMYFAKTGSGTWN 303 Query: 210 VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE--------------- 254 VY A T FN++GTLV + N Sbjct: 304 VYA---GPATGTATLIGTANFNSSGTLVSTSQVNTPIANPPTFTATTTLGGFSLSIPTTD 360 Query: 255 ----PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 P +L+ L + Q G N + + +GY G L S+ ++ DGT+ GNYSN QT Sbjct: 361 GSGTPQNITLN-LGATTQYGGKNGVNNLSTDGYAAGQLTSFTVSADGTLTGNYSNGQTAA 419 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 LGQIVLANFAN GL + G+N + T +SGVA + T G+ N G L GA+E SNVDL+ E Sbjct: 420 LGQIVLANFANQNGLVNLGNNEYGQTSASGVAQISTPGSTNHGVLQGGAVENSNVDLTSE 479 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LVN+I AQRNYQ+NAQTIKTQ + TL+NL Sbjct: 480 LVNLITAQRNYQANAQTIKTQQAVDQTLINL 510 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 107/378 (28%), Positives = 168/378 (44%), Gaps = 26/378 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M++ +SGL+A++++LDVIGNNIAN+ T GFKSGTA FADM+A S ++G+G K Sbjct: 1 MSYQTGLSGLSASSSDLDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + Q F+ GT T T + L+VAI+ NGF++L D NG++ YSRNG F+LD+N + N QG Sbjct: 61 LSEVQQQFSQGTITTTNQALNVAINGNGFYQLSD-NGTLVYSRNGVFQLDKNGFITNAQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFS 171 L+L GY A+ I A +++P +A + TT+ + +NLN+ D + + + Sbjct: 120 LKLMGYAASSAG--IINTAQTVPLTVPTANIAPQATTSITAGLNLNAQDNIMLGAPSVTA 177 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 T+ ++ ++ + T + V + T T Sbjct: 178 GGANTGTLTTTGATITNAAAGSNTDNYTINFTSPTTYTVSVNGGPASAAQPYTPGTAITL 237 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 NG + + P F N T + T + V+ Sbjct: 238 GNGESITFSGTPATNDSYTVAPNPTAF-----NQNSSTTYNYSTSTTAYDSLGGSQTVNM 292 Query: 292 QINDDGT-VVGNYSNEQTQLLGQIVLANFANNEGLASEGD--------NVWSATQSSGVA 342 G+ Y+ T I ANF ++ L S ++AT + G Sbjct: 293 YFAKTGSGTWNVYAGPATGTATLIGTANFNSSGTLVSTSQVNTPIANPPTFTATTTLGGF 352 Query: 343 LLGTAGTGNFGTLTNGAL 360 L T GT N L Sbjct: 353 SLSIPTTDGSGTPQNITL 370 >UniRef50_Q7UII2 Flagellar hook protein FlgE n=1 Tax=Rhodopirellula baltica RepID=Q7UII2_RHOBA Length = 811 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 88/330 (26%), Positives = 133/330 (40%), Gaps = 32/330 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + A++GL+AA T +DVIGNN+AN+ T GFKS A FA F + Sbjct: 6 ALTTALTGLSAAETQIDVIGNNLANAQTVGFKSSDAVFATQFLQTLSLGAGPSANNGGTN 65 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLGV+VA I + GT + D+AI +GFF++ ++G Y+RNG FKL+ Sbjct: 66 PRQIGLGVQVAEIAANHNQGTIEISSSSSDLAIQGDGFFQVQAADGEKLYTRNGIFKLNS 125 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + LVN G +L GY P ++ + T AK T S + L + Sbjct: 126 DAELVNATGQRLLGYGIDEQFRLQTDSLVPLSVPL-GTKTVAKATENVSFEGTLTPEGDV 184 Query: 165 ----PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVY------FVKTGDNNWQVYTQD 214 + ++ S +S A SV + G ++ D Sbjct: 185 ATAGQVIESLHLGDSQVPRPDASGVSIESSPIADHTSVTGTVGAGSLPAGTYQYKFALVD 244 Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN 274 +S S A ANG + G + + G + N + A+ Sbjct: 245 ASGNESAPSAARAFTVGANGNVDLGNLPQDPLGGDFPTVNIYR---TGPNGTEFEYLASA 301 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 T N L IN+D T+ GNY+ Sbjct: 302 AAGGTFNDDGSTALSGTPINED-TLTGNYT 330 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 19/309 (6%) Query: 104 ENRNLVNMQGLQLTG-YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD 162 + N+ G + G Y G + + I L A + T Sbjct: 511 SDNNITGESGDLVAGAYIQDGKIRLVSNNGEANAVDIE--LSAFRLTDELGQI------- 561 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN------NWQVYTQDSS 216 P + + A + V+DS G ++ V W + D+S Sbjct: 562 STPNLAFGTLQEAIGQSASSDFVVYDSLGVPINVRVSATLESRTDQATIYRWYADSPDNS 621 Query: 217 --DPNSIAKTATTLEFNANGTLVDGAM-ANNIATGAINGAEPATFSLSFLNSMQQNTGAN 273 I ++F+ NG V +I + P F + F T Sbjct: 622 VSGSTDITVGTGLIQFDGNGNFVTATEETISINRQGLPSVSPMQFEMDFSLVSGLATDEA 681 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 + AT Q+G +PG L S+ + +DGT+ G +SN ++ LGQ+ LA FAN GL + G N++ Sbjct: 682 TLAATQQDGSEPGVLNSFIVGEDGTIRGVFSNGISRDLGQLQLARFANPAGLEARGLNLY 741 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 + ++G+ + G G GT+ GALE SN D+ K+LV +++A Y+ N++ I T Q Sbjct: 742 AEGVNTGLPVTGQPGENGIGTVIGGALELSNTDIGKDLVELVLASTQYRGNSRVITTTQQ 801 Query: 394 ILNTLVNLR 402 +++ L+NLR Sbjct: 802 LIDELLNLR 810 >UniRef50_Q1PUJ3 Similar to flagellar hook protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUJ3_9BACT Length = 532 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 138/259 (53%), Gaps = 5/259 (1%) Query: 149 TTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNW 208 TT +++L+ SD ++ + + S T++DSQG H++++ F+K D W Sbjct: 273 TTAGEDELSLSISDSSTATGTWTNYSLKASTYTTSTTIYDSQGTGHNVTLSFIKKNDGEW 332 Query: 209 QVYT-QDSSDPNSIAKTATTLEFNANGTL-VDGAMANNIATGAINGAEPATFSLSF---L 263 + S+D T + + FN +G+L G I ++ F L Sbjct: 333 DMRASMPSADGTITTDTISAITFNDDGSLKSSGDTTLTFKFDGITTSQTVKFKLGTFGKT 392 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 + + Q+ +++ A+ Q+G + G S+ ++ DGT+ YSN + + Q+ LA F N + Sbjct: 393 DGIYQSGKGSSVTASEQDGSESGSFSSFSVDTDGTMYALYSNGTSSKIAQLQLATFGNVQ 452 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL GDN++ T SSG L T GTG+ G + NG LEASNVD++ EL ++I+AQR +Q Sbjct: 453 GLRRSGDNLYEQTDSSGEPLYTTGGTGSAGDIYNGYLEASNVDMTSELTSLIMAQRGFQL 512 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ I T D++L VNL+ Sbjct: 513 NSRVISTADEVLAEAVNLK 531 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 22/287 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLGV 52 A V+G+ + + LDVIGNN++N TYG+KS F+D+ + ++G+GV Sbjct: 6 ALYAGVTGIRSHQSWLDVIGNNLSNINTYGYKSSRLLFSDLISQDKGSGGVNPMQIGMGV 65 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM- 111 KV I+ F+ GT T D AI +GFF +++ F+SR G F D + LV+ Sbjct: 66 KVGSISSLFSQGTLEATNNEFDFAIQGDGFF-VLNGGNKNFFSRVGTFATDASNQLVDST 124 Query: 112 QGLQLT---GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI-------NLNSS 161 G Q+ G T + + +++ TL + ++++ + I + ++ Sbjct: 125 TGYQILDSSGKTITIPYGSSVSATKTSTMTLTGTLESTPSSSSGEVLILSSALTSSSVAA 184 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 T+ + D + +T+ ++ + SV F N+ + N+ Sbjct: 185 TGATTLNALDTNTTDYTSGTDIITISYTEPDGTSGSVDFTYGAANDGTTVDDLLAYINTN 244 Query: 222 AKTATT-LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ 267 A TT + + + I T G + + S+S ++ Sbjct: 245 AFGDTTGTAGDGSAFATLSSSGKIIVTSTTAGEDELSLSISDSSTAT 291 >UniRef50_A3ZNY1 Flagellar hook protein FlgE n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNY1_9PLAN Length = 929 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 10/308 (3%) Query: 104 ENRNLVNMQGLQLTGYPAT--GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 N+ + G G T G + + I + + NLN Sbjct: 622 SENNIADETGDLSQGIYITTEGRIRVVSNNGVDNGVDIGLSSFQLDNGSGVVQNPNLNFG 681 Query: 162 DPLPTVTPFSASNADSY------NKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS 215 V + ++ Y TV +S+ + + +F + DN+ D Sbjct: 682 VIQEAVGESAVADVIVYDSLGVPMNVRVTTVLESRNGTNTVYRWFADSPDNDGDT-IGDE 740 Query: 216 SDPNSIAKTATTLEFNANGTLVDG-AMANNIATGAINGAEPATFSLSFLNSMQQNTGANN 274 S+ I+ + F+ +G + I I P F L+F Sbjct: 741 SEAAKISVGTGLIYFDGDGNYIGSDNNTVTINRRNIPSESPLEFDLNFDQLSGLAADKAT 800 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 + A+ Q+G G L S+ I++DG + G +S+ + LG I LA FAN GL G+N+++ Sbjct: 801 LNASRQDGSGTGKLNSFIISEDGIIRGVFSSGVDRDLGMIQLARFANPSGLEQRGNNLFA 860 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 A +SG+ + G AG G++ GA+E SN D+ L+++I+A Y+ +++ I T Q+ Sbjct: 861 AGVNSGLPVQGDAGEEGIGSIIAGAVELSNTDIGGNLIDLILASTQYRGSSRIITTAQQL 920 Query: 395 LNTLVNLR 402 + L+N+R Sbjct: 921 FDELLNIR 928 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 18/172 (10%) Query: 10 LNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------------KVGLGV 52 + AA T +DV+GNN+ANS T GFK+ A FA+ F + +VGLGV Sbjct: 1 MTAAETQIDVLGNNLANSQTVGFKASDALFANQFLQTRGLGSKPSETDGGTNPRQVGLGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 VA IT +FT GT + D+AI +GFF + +NG Y+RNG FK + N LV + Sbjct: 61 MVAEITPNFTQGTIEVSSNPSDLAIQGDGFFIVQGNNGERLYTRNGIFKTNSNNELVTIG 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 G ++ G+ + P I + AK T ++ L ++ L Sbjct: 121 GERVLGFGIDENFNIQETQLVPLTIPL-GAAAVAKATENVYLEGTLPATGDL 171 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A1J2 Flagellar hook protein flgE n=279 Tax=Proteobact... 338 3e-91 UniRef50_Q6MHY9 FlgE protein n=1 Tax=Bdellovibrio bacteriovorus ... 323 6e-87 UniRef50_C1DW30 Flagellar hook protein FlgE n=3 Tax=Sulfurihydro... 322 1e-86 UniRef50_C4SBL3 Flagellar basal body FlaE domain protein n=2 Tax... 321 4e-86 UniRef50_C5SD65 Putative uncharacterized protein n=1 Tax=Allochr... 320 8e-86 UniRef50_Q74G30 Flagellar hook protein FlgE n=2 Tax=Geobacter Re... 317 6e-85 UniRef50_D0I440 Flagellar hook protein FlgE n=1 Tax=Grimontia ho... 317 7e-85 UniRef50_D0FQ44 Flagellar hook protein FlgE n=2 Tax=Erwinia pyri... 315 2e-84 UniRef50_B9MM16 Putative uncharacterized protein n=2 Tax=Clostri... 314 3e-84 UniRef50_B7R866 Flagellar basal body protein FlgE n=10 Tax=Therm... 313 1e-83 UniRef50_A2SKD4 Flagellar basal body and hook protein n=3 Tax=Be... 312 1e-83 UniRef50_C4U020 Flagellar hook protein FlgE n=2 Tax=Yersinia Rep... 312 2e-83 UniRef50_A4TKA1 Flagellar hook protein FlgE n=34 Tax=Enterobacte... 312 2e-83 UniRef50_D1NM00 Fagellar hook-basal body protein n=5 Tax=Clostri... 311 3e-83 UniRef50_B5YIG4 Flagellar hook protein FlgE n=1 Tax=Thermodesulf... 311 3e-83 UniRef50_Q8D3G0 FlgE protein n=2 Tax=Enterobacteriaceae RepID=Q8... 310 9e-83 UniRef50_A1HN32 Putative uncharacterized protein n=1 Tax=Thermos... 309 9e-83 UniRef50_B4UFG1 Putative uncharacterized protein n=3 Tax=Anaerom... 309 9e-83 UniRef50_A1WUE2 Flagellar basal body FlaE domain protein n=1 Tax... 307 4e-82 UniRef50_B9L4C8 Flagellar hook protein FlgE n=3 Tax=Bacteria Rep... 306 1e-81 UniRef50_B0RT16 Complete genome, strain B100 n=13 Tax=Xanthomona... 305 1e-81 UniRef50_A9IKQ4 FlgE protein n=2 Tax=Bordetella RepID=A9IKQ4_BORPD 305 1e-81 UniRef50_Q04UG8 Endoflagellar hook protein n=7 Tax=Spirochaetale... 305 2e-81 UniRef50_Q0AA87 Flagellar basal body FlaE domain protein n=1 Tax... 305 2e-81 UniRef50_A4G6B1 Flagellar hook protein FlgE n=8 Tax=Betaproteoba... 305 3e-81 UniRef50_A8VS11 DNA topoisomerase I n=1 Tax=Bacillus selenitired... 304 3e-81 UniRef50_C4KAU4 Flagellar basal body FlaE domain protein n=1 Tax... 303 5e-81 UniRef50_A1WFE3 Flagellar basal body FlaE domain protein n=7 Tax... 303 1e-80 UniRef50_Q3A5C5 Flagellar biosynthesis, hook protein n=2 Tax=Des... 302 1e-80 UniRef50_D2LSH1 Putative uncharacterized protein n=1 Tax=Bacillu... 302 1e-80 UniRef50_Q67K22 Flagellar hook protein n=1 Tax=Symbiobacterium t... 302 1e-80 UniRef50_Q0AJ53 Flagellar basal body FlaE domain protein n=1 Tax... 301 4e-80 UniRef50_D2S9L8 Flagellar hook-basal body protein n=3 Tax=Actino... 301 4e-80 UniRef50_A4BQF0 Flagellar hook protein n=1 Tax=Nitrococcus mobil... 300 5e-80 UniRef50_B9Z359 Flagellar basal body FlaE domain protein n=1 Tax... 300 7e-80 UniRef50_A4SL12 Flagellar hook protein FlgE n=3 Tax=Gammaproteob... 300 8e-80 UniRef50_A8MHE5 Putative uncharacterized protein n=2 Tax=Alkalip... 299 1e-79 UniRef50_A1T0J3 Flagellar hook protein FlgE n=18 Tax=Gammaproteo... 297 5e-79 UniRef50_A5V5R7 Flagellar basal body FlaE domain protein n=1 Tax... 295 2e-78 UniRef50_C6P7Q7 Putative uncharacterized protein n=1 Tax=Thermoa... 294 4e-78 UniRef50_B2AI79 FlgE: Flagellar hook protein n=6 Tax=Betaproteob... 293 1e-77 UniRef50_C6MIR8 Putative uncharacterized protein n=1 Tax=Nitroso... 292 1e-77 UniRef50_A1K948 FlgE protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K... 292 2e-77 UniRef50_C8WYV8 Fagellar hook-basal body protein n=1 Tax=Desulfo... 291 4e-77 UniRef50_Q5DY15 Lateral flagellar hook protein (FlgE-like) n=39 ... 291 4e-77 UniRef50_A3NFX5 Flagellar hook protein FlgE n=13 Tax=Betaproteob... 289 1e-76 UniRef50_D2TJ84 Lateral flagellar hook protein n=1 Tax=Citrobact... 289 1e-76 UniRef50_Q0AYM8 Flagellar hook protein n=1 Tax=Syntrophomonas wo... 289 1e-76 UniRef50_UPI0001850C8F flagellar hook protein FlgE n=1 Tax=Bacil... 287 5e-76 UniRef50_A0YG82 Flagellar hook protein n=1 Tax=marine gamma prot... 287 7e-76 UniRef50_Q44767 Flagellar hook protein flgE n=26 Tax=Spirochaeta... 286 1e-75 UniRef50_A0LT62 Putative uncharacterized protein n=2 Tax=Actinom... 285 1e-75 UniRef50_Q47I23 Putative uncharacterized protein n=1 Tax=Dechlor... 285 2e-75 UniRef50_A6GSX9 Flagellar hook protein E n=1 Tax=Limnobacter sp.... 285 2e-75 UniRef50_Q11LP2 Flagellar basal body FlaE n=7 Tax=Alphaproteobac... 285 3e-75 UniRef50_A4A615 Flagellar hook protein FlgE n=3 Tax=unclassified... 284 3e-75 UniRef50_A3JJM5 Flagellar hook protein E n=1 Tax=Marinobacter sp... 283 5e-75 UniRef50_B2UJX1 Flagellar basal body FlaE domain protein n=3 Tax... 283 6e-75 UniRef50_C2BUK6 Flagellar basal body and hook protein n=3 Tax=Mo... 283 8e-75 UniRef50_D0L1M3 Flagellar hook-basal body protein n=5 Tax=Chroma... 283 8e-75 UniRef50_B4RV33 Flagellar hook protein n=29 Tax=Gammaproteobacte... 282 1e-74 UniRef50_B0THB1 Flagellar hook protein n=1 Tax=Heliobacterium mo... 281 2e-74 UniRef50_Q1ZPI3 Flagellar hook protein n=3 Tax=Photobacterium Re... 281 3e-74 UniRef50_C6WVA7 Flagellar basal body FlaE domain protein n=3 Tax... 281 3e-74 UniRef50_A7K5D1 Flagellar hook protein FlgE n=56 Tax=Vibrionales... 280 5e-74 UniRef50_O07884 Flagellar hook protein flgE n=7 Tax=Treponema Re... 280 6e-74 UniRef50_Q1QW31 Flagellar basal body FlaE n=2 Tax=Gammaproteobac... 280 7e-74 UniRef50_Q1I728 Flagellar hook protein FlgE n=8 Tax=Pseudomonas ... 280 9e-74 UniRef50_Q9X5Y0 Flagellar hook protein flgE n=2 Tax=Rhizobiaceae... 279 1e-73 UniRef50_Q15R85 Flagellar basal body FlaE n=1 Tax=Pseudoalteromo... 279 1e-73 UniRef50_A6W8K5 Putative uncharacterized protein n=1 Tax=Kineoco... 278 3e-73 UniRef50_B1K372 Flagellar basal body FlaE domain protein n=54 Ta... 278 3e-73 UniRef50_C6XF46 Flagellar hook protein FlgE n=1 Tax=Candidatus L... 277 5e-73 UniRef50_A6X6N9 Flagellar basal body FlaE domain protein n=1 Tax... 276 7e-73 UniRef50_Q3J1S9 Flagellar hook protein FlgE n=5 Tax=Rhodobacter ... 276 9e-73 UniRef50_A8GYL4 Flagellar basal body FlaE domain protein n=13 Ta... 276 1e-72 UniRef50_Q7NU18 Flagellar hook protein flgE n=1 Tax=Chromobacter... 275 3e-72 UniRef50_Q8K9K6 Flagellar hook protein flgE n=4 Tax=Buchnera aph... 274 4e-72 UniRef50_B8KBZ1 Flagellar hook protein n=6 Tax=Vibrionaceae RepI... 274 4e-72 UniRef50_A6CQ97 Flagellar hook protein n=1 Tax=Bacillus sp. SG-1... 273 7e-72 UniRef50_Q48GC0 Flagellar hook protein FlgE n=10 Tax=Pseudomonas... 272 2e-71 UniRef50_C6NYI1 Flagellar hook protein flgE n=1 Tax=Acidithiobac... 271 4e-71 UniRef50_B8FTP1 Putative uncharacterized protein n=1 Tax=Desulfi... 270 5e-71 UniRef50_Q7WA94 Flagellar hook protein FlgE n=3 Tax=Bordetella R... 270 1e-70 UniRef50_A4C6G9 Flagellar hook protein n=2 Tax=Alteromonadales R... 269 1e-70 UniRef50_O52070 Flagellar hook protein flgE n=37 Tax=Rhizobiales... 269 1e-70 UniRef50_Q1IR53 Flagellar basal body FlaE n=2 Tax=Acidobacteria ... 269 2e-70 UniRef50_A6F9Q0 Flagellar hook protein n=2 Tax=Gammaproteobacter... 268 2e-70 UniRef50_B6R7Z8 Flagellar hook protein FlgE n=1 Tax=Pseudovibrio... 265 2e-69 UniRef50_A1UTT0 Flagellar hook protein FlgE n=1 Tax=Bartonella b... 263 8e-69 UniRef50_C6QF26 Flagellar basal body FlaE domain protein n=1 Tax... 263 9e-69 UniRef50_Q2KCE1 Flagellar hook protein n=27 Tax=Alphaproteobacte... 262 1e-68 UniRef50_C7LUH2 Putative uncharacterized protein n=1 Tax=Desulfo... 261 2e-68 UniRef50_Q5ZW68 Flagellar hook protein FlgE n=5 Tax=Legionella R... 260 9e-68 UniRef50_Q2RZC6 Flagellar biosynthesis cell-distal portion of ba... 260 9e-68 UniRef50_C4Z5G6 Flagellar hook protein FlgE n=2 Tax=Clostridiale... 258 2e-67 UniRef50_A6DYV2 Flagellar hook protein FlgE n=1 Tax=Roseovarius ... 258 2e-67 UniRef50_UPI00016C0DB8 hypothetical protein Epulo_06138 n=1 Tax=... 257 5e-67 UniRef50_B8CYR1 Flagellar hook protein FlgE, epsilon proteobacte... 256 8e-67 UniRef50_B1M7H7 Flagellar basal body FlaE domain protein n=8 Tax... 256 8e-67 UniRef50_Q63D88 Flagellar hook protein n=35 Tax=Bacillus cereus ... 256 1e-66 UniRef50_Q01PQ4 Putative uncharacterized protein n=1 Tax=Candida... 255 2e-66 UniRef50_A7GNH9 Putative uncharacterized protein n=1 Tax=Bacillu... 254 5e-66 UniRef50_A0LDL2 Putative uncharacterized protein n=1 Tax=Magneto... 253 7e-66 UniRef50_Q0EZL8 Putative uncharacterized protein n=1 Tax=Maripro... 253 7e-66 UniRef50_C5SQ30 Putative uncharacterized protein n=1 Tax=Asticca... 253 1e-65 UniRef50_C6HWM7 Probable flagellar hook protein FlgE n=1 Tax=Lep... 252 2e-65 UniRef50_B6IQC5 Flagellar hook protein FlgE n=1 Tax=Rhodospirill... 252 2e-65 UniRef50_UPI00016C5508 hypothetical protein GobsU_27906 n=1 Tax=... 252 2e-65 UniRef50_C2PD26 Flagellar hook protein FlgE n=1 Tax=Bacillus cer... 251 2e-65 UniRef50_A0Q031 Flagellar basal-body rod protein FlgG n=1 Tax=Cl... 251 3e-65 UniRef50_Q1MRH2 Flagellar hook protein FlgE n=6 Tax=Desulfovibri... 250 8e-65 UniRef50_B9JZL6 Flagellar hook protein n=1 Tax=Agrobacterium vit... 250 9e-65 UniRef50_B6AMB9 Probable flagellar hook protein FlgE n=2 Tax=Lep... 249 2e-64 UniRef50_Q6AGA2 Flagellar hook protein n=1 Tax=Leifsonia xyli su... 248 2e-64 UniRef50_C5CYE8 Putative uncharacterized protein n=1 Tax=Variovo... 248 2e-64 UniRef50_A9KNF2 Putative uncharacterized protein n=1 Tax=Clostri... 248 3e-64 UniRef50_Q24T89 Putative uncharacterized protein n=1 Tax=Desulfi... 247 6e-64 UniRef50_A0AGF2 Complete genome n=21 Tax=Listeria RepID=A0AGF2_L... 246 7e-64 UniRef50_C9LSP4 Flagellar hook protein FlgE n=1 Tax=Selenomonas ... 246 1e-63 UniRef50_B7HLV4 Flagellar hook protein n=32 Tax=Bacillus cereus ... 246 1e-63 UniRef50_B7GGB1 Flagellar hook protein FlgE n=1 Tax=Anoxybacillu... 244 4e-63 UniRef50_B4RG77 Flagellar hook protein FlgE n=1 Tax=Phenylobacte... 242 1e-62 UniRef50_C6XM57 Putative uncharacterized protein n=1 Tax=Hirschi... 241 4e-62 UniRef50_Q1YLP3 Putative flagellar hook protein FlgE n=1 Tax=Aur... 241 5e-62 UniRef50_Q28JM2 Flagellar hook protein FlgE putative n=30 Tax=Ba... 238 3e-61 UniRef50_C4G364 Putative uncharacterized protein n=1 Tax=Abiotro... 238 4e-61 UniRef50_Q89F43 Flagellar hook protein n=1 Tax=Bradyrhizobium ja... 238 4e-61 UniRef50_A7HW68 Putative uncharacterized protein n=1 Tax=Parviba... 237 7e-61 UniRef50_C5SMJ1 Putative uncharacterized protein n=1 Tax=Asticca... 237 7e-61 UniRef50_C4ZAN8 Flagellar hook protein n=1 Tax=Eubacterium recta... 236 1e-60 UniRef50_B1TBA9 Putative uncharacterized protein n=1 Tax=Burkhol... 235 2e-60 UniRef50_Q2CGG5 Flagellar hook protein FlgE, putative n=3 Tax=Rh... 235 2e-60 UniRef50_B8J3H7 Putative uncharacterized protein n=1 Tax=Desulfo... 234 3e-60 UniRef50_C5RFU7 Putative uncharacterized protein n=1 Tax=Clostri... 234 4e-60 UniRef50_Q0G073 Flagellar hook protein E n=1 Tax=Fulvimarina pel... 233 1e-59 UniRef50_A8TLX3 Flagellar basal body FlaE domain protein n=1 Tax... 232 1e-59 UniRef50_Q6LW64 Hypothetical flagellar hook protein FlgE n=1 Tax... 232 2e-59 UniRef50_D0XNJ6 Putative uncharacterized protein n=1 Tax=Brevund... 231 4e-59 UniRef50_A3UFN4 Flagellar hook protein n=2 Tax=Hyphomonadaceae R... 229 1e-58 UniRef50_C6NWL1 Flagellar hook protein flgE n=2 Tax=Proteobacter... 229 1e-58 UniRef50_A9DSB3 Flagellar hook protein FlgE n=1 Tax=Oceanibulbus... 228 3e-58 UniRef50_A0NPJ1 Putative uncharacterized protein n=1 Tax=Labrenz... 228 3e-58 UniRef50_D0XTV6 Flagellar basal body FlaE domain protein n=1 Tax... 226 8e-58 UniRef50_A4U4J9 Flagellar hook protein FlgE n=1 Tax=Magnetospiri... 225 2e-57 UniRef50_D1U447 Putative uncharacterized protein n=1 Tax=Desulfo... 224 6e-57 UniRef50_C7M216 Putative uncharacterized protein n=1 Tax=Acidimi... 223 1e-56 UniRef50_O67711 Flagellar hook protein flgE n=2 Tax=Aquificaceae... 222 1e-56 UniRef50_D1TF51 Flagellar hook protein (Fragment) n=1 Tax=Burkho... 222 2e-56 UniRef50_Q07TK1 Flagellar basal body FlaE domain protein n=8 Tax... 221 5e-56 UniRef50_C6C0P3 Putative uncharacterized protein n=1 Tax=Desulfo... 218 3e-55 UniRef50_B7ATR6 Putative uncharacterized protein n=1 Tax=Bactero... 214 3e-54 UniRef50_UPI0001BCD67A flagellar hook protein FlgE n=1 Tax=Selen... 214 4e-54 UniRef50_Q2RRL4 Putative uncharacterized protein n=1 Tax=Rhodosp... 214 4e-54 UniRef50_A4WW59 Putative uncharacterized protein n=4 Tax=Rhodoba... 214 6e-54 UniRef50_A3SFR5 Putative flagellar hook protein n=2 Tax=Sulfitob... 213 9e-54 UniRef50_Q12T69 Putative uncharacterized protein n=1 Tax=Shewane... 213 1e-53 UniRef50_Q9Z5T5 Flagellar hook protein n=2 Tax=Zymomonas mobilis... 211 5e-53 UniRef50_B6BH25 Conserved domain protein n=2 Tax=Campylobacteral... 209 1e-52 UniRef50_C8WBV9 Putative uncharacterized protein n=2 Tax=Zymomon... 208 3e-52 UniRef50_B9R0M9 Conserved domain protein n=1 Tax=Labrenzia alexa... 207 5e-52 UniRef50_B5JK44 Conserved domain protein n=1 Tax=Verrucomicrobia... 206 1e-51 UniRef50_Q2RRB3 Putative uncharacterized protein n=2 Tax=Rhodosp... 203 7e-51 UniRef50_D2M8A9 Flagellar basal body FlaE domain protein n=1 Tax... 203 8e-51 UniRef50_Q5FS48 Flagellar hook protein FlgE n=2 Tax=cellular org... 201 5e-50 UniRef50_Q97H59 Flagellar hook protein FlgE n=1 Tax=Clostridium ... 199 2e-49 UniRef50_A5FUQ6 Flagellar basal body FlaE domain protein n=1 Tax... 198 3e-49 UniRef50_B0ULI9 Flagellar basal body FlaE domain protein n=10 Ta... 197 6e-49 UniRef50_B2V236 Flagellar hook protein FlgE n=9 Tax=Clostridium ... 196 2e-48 UniRef50_C1A555 Flagellar hook protein FlgE n=1 Tax=Gemmatimonas... 188 3e-46 UniRef50_C0QPA5 Flagellar basal body and hook protein FlgE n=1 T... 187 6e-46 UniRef50_C6N701 Putative uncharacterized protein n=1 Tax=Legione... 186 1e-45 UniRef50_Q2LSZ5 Flagellar hook protein n=1 Tax=Syntrophus acidit... 184 5e-45 UniRef50_A6Q2N3 Flagellar basal body and hook protein FlgE n=2 T... 182 1e-44 UniRef50_B9MGE1 Flagellar basal body FlaE domain protein n=3 Tax... 181 3e-44 UniRef50_A5W0G4 Flagellar basal body FlaE domain protein n=3 Tax... 181 3e-44 UniRef50_D1B6B8 Putative uncharacterized protein n=1 Tax=Therman... 181 5e-44 UniRef50_A5N7C1 FlgE n=2 Tax=Clostridium kluyveri RepID=A5N7C1_C... 180 1e-43 UniRef50_Q6AJT3 Related to flagellar hook protein (FlgE) n=1 Tax... 178 3e-43 UniRef50_A0RRQ1 Flagellar hook protein FlgE n=4 Tax=Proteobacter... 177 4e-43 UniRef50_B7RBK4 Flagellar hook protein n=3 Tax=Thermotogaceae Re... 177 8e-43 UniRef50_C1TKJ0 Flagellar hook protein FlgE n=1 Tax=Dethiosulfov... 176 2e-42 UniRef50_Q1MQV7 Flagellar hook protein FlgE n=1 Tax=Lawsonia int... 175 3e-42 UniRef50_Q485P3 Flagellar hook protein FlgE n=1 Tax=Colwellia ps... 175 3e-42 UniRef50_B9L651 Flagellar hook protein FlgE n=2 Tax=Nautiliaceae... 173 8e-42 UniRef50_B2A353 Putative uncharacterized protein n=1 Tax=Natrana... 173 1e-41 UniRef50_B7IDJ5 Flagellar hook protein FlgE n=2 Tax=Thermosipho ... 172 2e-41 UniRef50_A6W1A3 Putative uncharacterized protein n=2 Tax=Marinom... 171 5e-41 UniRef50_B1XWJ5 Putative uncharacterized protein n=1 Tax=Leptoth... 171 5e-41 UniRef50_Q72C41 Flagellar hook protein FlgE n=3 Tax=Desulfovibri... 170 9e-41 UniRef50_D2C6I0 Fagellar hook-basal body protein n=3 Tax=Thermot... 169 1e-40 UniRef50_C1DC21 Flagellar hook protein FlgE n=1 Tax=Laribacter h... 169 2e-40 UniRef50_C8QYQ3 Putative uncharacterized protein n=1 Tax=Desulfu... 167 5e-40 UniRef50_Q9ZKY0 Flagellar hook protein flgE n=23 Tax=Helicobacte... 167 5e-40 UniRef50_Q48GC1 Flagellar basal-body protein, putative n=6 Tax=P... 167 8e-40 UniRef50_Q2BQT8 Flagellar hook protein (FlgE)-like n=1 Tax=Neptu... 166 2e-39 UniRef50_C0QAJ6 FlgE n=1 Tax=Desulfobacterium autotrophicum HRM2... 165 2e-39 UniRef50_Q5HS69 Flagellar hook protein n=15 Tax=Campylobacter Re... 165 2e-39 UniRef50_Q1JZT1 Putative uncharacterized protein n=1 Tax=Desulfu... 164 6e-39 UniRef50_B8DS27 Putative uncharacterized protein n=1 Tax=Desulfo... 164 6e-39 UniRef50_C7LRK3 Putative uncharacterized protein n=2 Tax=Desulfo... 163 1e-38 UniRef50_Q4JMN8 Predicted flagellar hook protein n=1 Tax=uncultu... 162 2e-38 UniRef50_A7HN97 Putative uncharacterized protein n=1 Tax=Fervido... 162 2e-38 UniRef50_UPI0001C35D09 hypothetical protein ChatD1_21894 n=1 Tax... 162 2e-38 UniRef50_D1U366 Putative uncharacterized protein n=1 Tax=Desulfo... 161 6e-38 UniRef50_D2L1Z5 Putative uncharacterized protein n=1 Tax=Desulfo... 160 8e-38 UniRef50_Q1N302 Flagellar hook protein FlgE n=3 Tax=Proteobacter... 160 8e-38 UniRef50_A7GVS8 Flagellar hook protein FlgE n=2 Tax=Campylobacte... 160 8e-38 UniRef50_B9K8L8 Flagellar basal-body rod protein FlgG n=106 Tax=... 160 1e-37 UniRef50_B9KEI8 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 159 1e-37 UniRef50_A4J757 Putative uncharacterized protein n=1 Tax=Desulfo... 159 1e-37 UniRef50_Q3ADD6 Flagellar basal-body rod protein FlgG n=1 Tax=Ca... 159 1e-37 UniRef50_C9R9Y6 Fagellar hook-basal body protein n=1 Tax=Ammonif... 159 2e-37 UniRef50_C6RJ18 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 159 2e-37 UniRef50_Q30UL8 Flagellar hook FlgE n=2 Tax=Campylobacterales Re... 159 2e-37 UniRef50_B9CY95 Flagellar hook protein FlgE n=1 Tax=Campylobacte... 158 3e-37 UniRef50_Q1YV97 Flagellar hook protein FlgE n=1 Tax=gamma proteo... 157 7e-37 UniRef50_C5V017 Putative uncharacterized protein n=1 Tax=Gallion... 157 7e-37 UniRef50_C6BZU9 Putative uncharacterized protein n=1 Tax=Desulfo... 156 1e-36 UniRef50_Q1NLV6 Putative uncharacterized protein n=2 Tax=delta p... 156 2e-36 UniRef50_B8FK43 Putative uncharacterized protein n=1 Tax=Desulfa... 156 2e-36 UniRef50_C5ZVV6 Flagellar hook protein n=2 Tax=Helicobacter RepI... 155 2e-36 UniRef50_C8W1G5 Putative uncharacterized protein n=1 Tax=Desulfo... 155 2e-36 UniRef50_A7H673 Flagellar hook protein n=8 Tax=Campylobacter jej... 155 2e-36 UniRef50_C4XMS5 Flagellar hook protein FlgE n=1 Tax=Desulfovibri... 155 3e-36 UniRef50_C3XKG1 Flagellar hook protein FlgE n=1 Tax=Helicobacter... 154 4e-36 UniRef50_C4XPF7 Flagellar hook protein FlgE n=1 Tax=Desulfovibri... 154 5e-36 UniRef50_D1B5D3 Flagellar hook protein FlgE n=1 Tax=Sulfurospiri... 154 6e-36 UniRef50_C5BRS0 Flagellar basal body protein FlgE n=1 Tax=Teredi... 153 9e-36 UniRef50_B1HQW6 Flagellar basal-body rod protein flgG (Distal ro... 153 1e-35 UniRef50_B5J6Y8 Conserved domain protein n=3 Tax=cellular organi... 153 1e-35 UniRef50_A4BEL5 Flagellar hook protein FlgE n=2 Tax=cellular org... 152 2e-35 UniRef50_D2R533 Flagellar basal body FlaE domain protein n=1 Tax... 152 2e-35 UniRef50_Q21IK9 Flagellar basal body FlaE n=3 Tax=Bacteria RepID... 152 2e-35 UniRef50_C6BXM1 Putative uncharacterized protein n=1 Tax=Desulfo... 152 3e-35 UniRef50_C1A537 Flagellar basal-body rod protein FlgG n=1 Tax=Ge... 151 3e-35 UniRef50_B8CYN8 Flagellar basal-body rod protein FlgG n=2 Tax=Ba... 151 4e-35 UniRef50_C1SLD6 Flagellar hook protein FlgE n=1 Tax=Denitrovibri... 151 4e-35 UniRef50_Q2SDU1 Flagellar hook protein FlgE n=3 Tax=Gammaproteob... 151 6e-35 UniRef50_Q0AYE2 Flagellar basal-body rod protein FlgG n=4 Tax=Ba... 150 8e-35 UniRef50_Q7UII2 Flagellar hook protein FlgE n=1 Tax=Rhodopirellu... 150 8e-35 UniRef50_O51715 Flagellar basal-body rod protein flgG n=70 Tax=B... 149 1e-34 UniRef50_C0GJF5 Flagellar basal body rod protein n=1 Tax=Dethiob... 149 1e-34 UniRef50_B4U878 Putative uncharacterized protein n=1 Tax=Hydroge... 149 1e-34 UniRef50_Q31FL0 Flagellar hook protein FlgE n=1 Tax=Thiomicrospi... 149 2e-34 UniRef50_C4V4D1 Flagellar hook protein FlgE n=2 Tax=Selenomonas ... 149 2e-34 UniRef50_P0ABX7 Flagellar basal-body rod protein flgG n=108 Tax=... 148 3e-34 UniRef50_D2L5W2 Putative uncharacterized protein n=1 Tax=Desulfo... 148 3e-34 UniRef50_B8J087 Putative uncharacterized protein n=1 Tax=Desulfo... 148 4e-34 UniRef50_Q1PUJ3 Similar to flagellar hook protein n=1 Tax=Candid... 147 6e-34 Sequences not found previously or not previously below threshold: >UniRef50_P0A1J2 Flagellar hook protein flgE n=279 Tax=Proteobacteria RepID=FLGE_SALTI Length = 403 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 353/404 (87%), Positives = 373/404 (92%), Gaps = 3/404 (0%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD Sbjct: 1 MSFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG+QLTGYP Sbjct: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 ATGTPPTIQQGANP I+IPNTLMAAK+TTTASMQINLNS+DP+P+ TPFS S+ADSYNK Sbjct: 121 ATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDADSYNK 180 Query: 181 KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD--PNSIAKTATTLEFNANGTLVD 238 KG+VTV+DSQGNAHDM+VYFVKT DN W VYT DSSD + +TTL+FN NG L Sbjct: 181 KGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNENGILES 240 Query: 239 GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGT 298 G NI TG INGA ATFSLSFLNSMQQNTGANNIVAT QNGYKPGDLVSYQIN+DGT Sbjct: 241 GG-TVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGT 299 Query: 299 VVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNG 358 VVGNYSNEQ Q+LGQIVLANFANNEGLAS+GDNVW+ATQ+SGVALLGTAG+GNFG LTNG Sbjct: 300 VVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNG 359 Query: 359 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR Sbjct: 360 ALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 403 >UniRef50_Q6MHY9 FlgE protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHY9_BDEBA Length = 427 Score = 323 bits (828), Expect = 6e-87, Method: Composition-based stats. Identities = 128/426 (30%), Positives = 198/426 (46%), Gaps = 30/426 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + VSG+ A L VIG+NIAN+ T GFK+ A F D+ + G+++G GVK Sbjct: 6 SLYTGVSGMTAQGEALGVIGDNIANANTIGFKASRAEFQDIISKNLKGIVGGNQIGRGVK 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + + G T + D+AIS +G+F++ S+G Y+R+G F D LV Sbjct: 66 IGAVNPILSQGNIDATEKVTDLAISGDGYFKVKGSDGE-SYTRDGSFHFDREGYLVTNDN 124 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++ G+ + + T+I P L+ AK T + +NL+S PT A Sbjct: 125 QRVQGFSTDEKGNIVNK---MTDIKFPRALIPAKATKELKLDLNLDSRME-PTKKFDPAD 180 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK-------TAT 226 + + V ++DSQGN H +S +F K D W+ + + A Sbjct: 181 PYSTSHYSTGVEMYDSQGNKHLVSFFFNKVNDREWEFKGLVDGKEITGGEEGKMSEVAAG 240 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF----------LNSMQQNTGANNIV 276 L F +G L + + L+F L+ +Q ++++ Sbjct: 241 KLMFTVDGKLDSQETTSTNFNFKGGALQDQQVKLNFGDAIKDGGKGLDGTKQYGKNSDLI 300 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 + Q+G G + ND+GT+ YSN Q L QI LA F N E L G+N + Sbjct: 301 SWHQDGAAAGTITGLSFNDEGTLTAVYSNGQANDLAQIALAKFENPEALFKVGNNRLKES 360 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 + SG A +G G G L +LE S VDL+ E VNMI QR +Q+NA+TI T D++LN Sbjct: 361 RDSGTASVGAPGAAGRGKLFAKSLERSTVDLATEFVNMIQNQRGFQANAKTITTTDELLN 420 Query: 397 TLVNLR 402 ++ L+ Sbjct: 421 EVIQLK 426 >UniRef50_C1DW30 Flagellar hook protein FlgE n=3 Tax=Sulfurihydrogenibium RepID=C1DW30_SULAA Length = 409 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 136/413 (32%), Positives = 219/413 (53%), Gaps = 20/413 (4%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------KVG 49 +F AVSGLN +DVI +NIAN T GFKS +F D+ A S ++G Sbjct: 4 SFYTAVSGLNGNQKWIDVISDNIANVNTIGFKSERVTFEDLVAKSLTTFANNTPKNMEIG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G +A T+DF+ G+ NT LD+A+ GFF + D+ G+V+Y+R GQF+LD N ++V Sbjct: 64 GGSFIALTTKDFSQGSFQNTVNPLDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANGDIV 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 N+ G++L G+ A I+IP +++ + TT ++ S Sbjct: 124 NVDGMKLQGWKLDTAGNI---SAALDKINIPYSILPSITTKINLVEPTNLDSRVNTISGT 180 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLE 229 +N ++N S+T++DS GN H ++ YF K+ N W V ++ + + TL+ Sbjct: 181 IDPTNPATFNYANSMTIYDSLGNPHTLTFYFQKSSPNTWNVAAYVDNN-TTTPVGSGTLQ 239 Query: 230 FNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 F++ G L+ G+ P T ++ L ++Q I Q+G+ GDL+ Sbjct: 240 FDSTGKLISGSPITLSIPLTNGATTPQTVTVD-LTQVKQVASDF-IFYANQDGFAKGDLI 297 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 +++DG V G YSN + +L+ ++ +A F + E L +G+N++ S ++ T G Sbjct: 298 GVSVSEDGVVRGMYSNGKVELIARLAVATFKDKEMLVRKGNNLYLPNTQSFTPII-TPG- 355 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SNVD+SKE +N+I AQR YQ+NA+ I T DQIL +N++ Sbjct: 356 GILSKVRSGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEAMNIK 408 >UniRef50_C4SBL3 Flagellar basal body FlaE domain protein n=2 Tax=Yersinia RepID=C4SBL3_YERMO Length = 407 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 197/407 (48%), Positives = 258/407 (63%), Gaps = 7/407 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQ +SGLNAA+ LDV+GNNIANS T GFKSG+ +FAD+FAGS+VG+GV+V+ + Q+ Sbjct: 1 MGFSQGLSGLNAASQALDVVGNNIANSQTVGFKSGSIAFADVFAGSQVGMGVQVSSVNQN 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F+DG + LD+ I NGFFRL + G VFYSRNGQFK DEN ++N QG+ LTGY Sbjct: 61 FSDGVLGSGASSLDMGIQGNGFFRLTNEAGRVFYSRNGQFKQDENGFIINNQGMFLTGYQ 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT-PFSASNADSYN 179 A+GTPP IQ GA I IP+ M A+ + S+ NL+S + F ++ SY+ Sbjct: 121 ASGTPPAIQPGAAVGPIQIPSGQMPARASDGGSLSGNLDSGTEVVDPAIKFDPADNKSYS 180 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT-----LEFNANG 234 V +DS GN H ++VY+VKT DN W+ Y+ D++ P L+F+ +G Sbjct: 181 SVSQVDGYDSLGNRHTINVYYVKTSDNEWKAYSSDTTSPKLDNNGDPVYQELELKFDTSG 240 Query: 235 TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 L ++ + A NG EP F L M Q + + T GY PG + Y + Sbjct: 241 QLTTKPAKLSVQSAAYNGGEPLDFELDMDG-MTQQASDTAMASPTTTGYAPGQMNGYTVG 299 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 D+G ++ +YSN Q QLLGQ+VL+NF N GL+S+GDN WS T +SG + G AGTGN G Sbjct: 300 DNGQIIASYSNGQQQLLGQVVLSNFTNPGGLSSQGDNCWSETPASGQPVDGIAGTGNLGN 359 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L LEASNVDLSKE+VNMIV QRNYQSN+QTIKTQ ++L L NL Sbjct: 360 LFGNRLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQILANL 406 >UniRef50_C5SD65 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD65_CHRVI Length = 436 Score = 320 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 162/436 (37%), Positives = 228/436 (52%), Gaps = 34/436 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M+FS +SGL AAA +L+V GNN+ANS T GFK A FAD++A S K +GV++ Sbjct: 1 MSFSIGLSGLQAAAKDLEVTGNNVANSGTIGFKKSRAEFADIYASSFYTCVNKSAVGVRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQ 112 +TQ F+ G T LD+AI+ GFF L G Y+RNG F++D + +VN Sbjct: 61 DAVTQQFSQGNVELTDNTLDLAINGEGFFVLNSEAGQDGKVYTRNGAFQVDRDGYVVNSS 120 Query: 113 GLQLTGYPATGTPPTIQ--QGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G +L YP T + +I +P MA K TT +Q+NLNS + + T T Sbjct: 121 GQRLQAYPPTTPNSAVSAFDTGKLEDIQLPLDNMAPKATTEVELQVNLNSDETVITGTTP 180 Query: 171 SAS------------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY---TQDS 215 + SYN + V+DS G D+++YFVKT +NW V+ + Sbjct: 181 PGPAFAFPTAPATDVDPTSYNWSTTYQVYDSLGKPRDVTMYFVKTAPDNWAVHVGMRDSA 240 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANN---------IATGAINGAEPATFSLSFLNSM 266 + T F A G N + NGA FS+ NS Sbjct: 241 GVMQDVGGGTNTAIFTAAGVFDTATSTPNPIAVSVGPFLTPPDDNGAGALAFSIDMSNST 300 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q + NN+ TQ+GY G L + ++ DG + YSN ++ +LGQ+ +ANF N +GL Sbjct: 301 QYHNSRNNLNDVTQDGYTSGTLSGFDVDADGAIFSRYSNGKSYVLGQVAMANFKNPQGLQ 360 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 GDN W + +SG + AG G G++ + ALE SNVDLS+ELVNMI AQRNY++NA+ Sbjct: 361 QLGDNNWGESYNSGEPIYAAAGDGRLGSIQSCALENSNVDLSQELVNMITAQRNYEANAK 420 Query: 387 TIKTQDQILNTLVNLR 402 TI T DQ+ T++N+R Sbjct: 421 TISTSDQMTQTILNIR 436 >UniRef50_Q74G30 Flagellar hook protein FlgE n=2 Tax=Geobacter RepID=Q74G30_GEOSL Length = 419 Score = 317 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 137/415 (33%), Positives = 212/415 (51%), Gaps = 16/415 (3%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 A +SGLNA + VIGNNI+N T GFK G F+D+ + GS++G GV++ Sbjct: 6 ALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQT 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 + FT G+ +T G D+AI + FF + +++G +Y+R G F ++++ LVN +G Q+ Sbjct: 66 VENQFTQGSFESTESGTDLAIQGDSFFVVQNTSG-RYYTRAGAFSFNKDKTLVNPEGYQV 124 Query: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 GY + P +++ K T+T +NL+S+ PT+ A+ Sbjct: 125 MGYGIIPSSGLSDGVLKPIDLT-NFATTPPKQTSTVKFVVNLDSTQTTPTLAWDPANPVA 183 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS-----SDPNSIAKTATTLEFN 231 + N S++V+DSQGNAH +VYF KT DN W + + ++ TL F+ Sbjct: 184 TSNYSTSLSVYDSQGNAHTATVYFRKTADNAWDWHVILPDAAAGTPGSTTTPIDGTLTFD 243 Query: 232 ANGTLVDGAM----ANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 A G L A NI A F + + Q ++ + + TQ+GY G Sbjct: 244 ATGALTAQTPLAGAAQNITFAGGVTAPQPIFFDLGVGATTQYASSSVVSSQTQDGYYQGT 303 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 L I+D G V G YSN Q Q L Q+ LA F++ GL+ G ++ T SG L A Sbjct: 304 LTKVTIDDKGYVNGVYSNGQLQKLYQVALAKFSSTAGLSKAGGTLFEETLESGQPLFSDA 363 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T G + +LE SNVD++ + V MI QR Y +N++TI T D++L +++L+ Sbjct: 364 STPGVGKILANSLEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLSLK 418 >UniRef50_D0I440 Flagellar hook protein FlgE n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I440_VIBHO Length = 401 Score = 317 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 149/405 (36%), Positives = 217/405 (53%), Gaps = 11/405 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKV---AGI 57 M+ + +SGL A + ++ I +NI+N T G+KS F D++A G + + Sbjct: 1 MSINIGLSGLRATSDQINTISHNISNVGTVGYKSSRTEFQDVYAPQFGGGEFGGVEVSNV 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 Q FT G T+TGR D+AI+ GFF + NG Y+RNG F LD + LV GL+L Sbjct: 61 RQSFTSGAATSTGRNSDLAINGEGFFMVQQ-NGQRMYTRNGIFNLDSDGYLVTADGLRLQ 119 Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNA 175 GY + T Q T++ I MAAK TT S+ +NL++S + P F + Sbjct: 120 GYGVSETGSI--QNGALTDLQISTADMAAKVTTKVSLGVNLDASAAVIVPKEKKFDKDDP 177 Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGT 235 ++ S TV+DS G H+++ YFVKT +N W V+ +D + T LEF+ NG Sbjct: 178 STFTCSASTTVYDSLGGEHEITQYFVKTDENTWSVHYV--ADGKELDPKNTQLEFDENGK 235 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 L+ ++ NG+ + Q +I + Q+GY PG L + + Sbjct: 236 LIKPEDPISVTLTPKNGSATMKIEMDVS-EFTQFGSDFSINESKQDGYAPGKLAGWYFDA 294 Query: 296 DGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTL 355 DG+V YSN +TQL GQ+VLA F N EGL G W+ + SSG AL G GTG FG L Sbjct: 295 DGSVYARYSNGKTQLQGQLVLARFPNQEGLQQAGGTRWTESFSSGTALFGQPGTGQFGAL 354 Query: 356 TNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 GA E+SNVDL++E+V+++ AQ NYQ+NA+TI+ +++ L Sbjct: 355 RVGAYESSNVDLTEEMVSLMSAQSNYQANAKTIQASQEMVQILFQ 399 >UniRef50_D0FQ44 Flagellar hook protein FlgE n=2 Tax=Erwinia pyrifoliae RepID=D0FQ44_ERWPY Length = 410 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 195/411 (47%), Positives = 265/411 (64%), Gaps = 10/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+FSQ +SGLNAAA+ LDV+GNNIANS T+GFK+G+ FAD+FAG++ G+GV+VAG +Q+ Sbjct: 1 MSFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFAGAQ-GMGVQVAGSSQN 59 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN-MQGLQLTGY 119 F DG T TGR +D+ I+ NGFFRL+D G +YSRNGQF D N + N GL+LTGY Sbjct: 60 FKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLRLTGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 ATGTPP IQ GA I I T M +T+ + NL +S + T TPF ++ +++N Sbjct: 120 QATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGKLNGNLTASAEVVTKTPFDHTDGETFN 179 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA------TTLEFNAN 233 + FDS GN H + +Y+VKT W+ Y D+S P + ++F+ N Sbjct: 180 SSSQIEAFDSLGNRHTIDIYYVKTATGEWKAYANDASAPVTSGTPPKSEYTELDIKFDEN 239 Query: 234 GTLVDGAMAN--NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 G L + A ++ N+ + +NGA P L Q + A+ +G+ G+ V++ Sbjct: 240 GKLTNDAASSILNVKSAGLNGATPLDLQLDLSGITQHESDASTFEPVKTDGHAAGNYVNF 299 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 QI D+G + NY N + QL+ Q+VLANFAN GL G+N W + SG +++GTAGTG+ Sbjct: 300 QIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVESPQSGGSIIGTAGTGS 359 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+LT GALE SNVDL E+VNMIV QRNYQSN+QTIKTQ ++L TLVNLR Sbjct: 360 FGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQTLVNLR 410 >UniRef50_B9MM16 Putative uncharacterized protein n=2 Tax=Clostridia RepID=B9MM16_ANATD Length = 488 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 139/484 (28%), Positives = 212/484 (43%), Gaps = 83/484 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++S L A T +DVIG+NIAN T GFKS +FA +FA Sbjct: 4 SMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASGRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 ++GLGV VA + + T G+ T D+AI +GFF + + ++R G F L Sbjct: 64 SNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGNFSL 123 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSS 161 D+ NLV GL + G+ I +P+ I+I + K T S NL++ Sbjct: 124 DKMGNLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNLSAD 183 Query: 162 DPLPTVTPFSASN----ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY------ 211 + + + S +FDSQG H + + F+KTGDN W+ + Sbjct: 184 TKIYSGQITKFEDLLNVPADSKYSTSFKIFDSQGKEHTLQLTFIKTGDNTWEWFVDAPRV 243 Query: 212 -------------------TQDSSDPNSIAKTATTLEFNANGTLVDGAMANN-----IAT 247 ++++ T+ F G ++D + I Sbjct: 244 KKNIGTAQNPQEAYVYVDDMIEANNDYDNFIARGTITFGQAGKVLDDENTPDVEGIAITG 303 Query: 248 GAINGAEPATFSLSFLNS-----------------------------MQQNTGANNIVAT 278 G + TF+++F N+ Q ++I Sbjct: 304 GRFINTQNGTFTINFKNNVVNPVTLKVNSSQFDVNDATNIAFFLKNITQFGNMESSIRVA 363 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 GY G L + ++ G + G YSN QL+GQI +A FAN GL GDN++ T + Sbjct: 364 QMTGYSAGSLQGFNVDASGKITGVYSNGLNQLIGQIAIATFANPAGLQRIGDNLYINTVN 423 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG +GT G+G+ GT++ G LE SNVDL+KE +MIV QR YQ+NA+ I D++L L Sbjct: 424 SGDPEIGTPGSGSRGTISQGTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDL 483 Query: 399 VNLR 402 VN++ Sbjct: 484 VNIK 487 >UniRef50_B7R866 Flagellar basal body protein FlgE n=10 Tax=Thermoanaerobacteraceae RepID=B7R866_9THEO Length = 415 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 132/424 (31%), Positives = 207/424 (48%), Gaps = 36/424 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL A LDVIGNNIAN T G+K+ +F ++F+ + Sbjct: 4 SMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLGV +A I FT G T D++I NGFF + + S+ Y+R G F D Sbjct: 64 PQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGE-SILYTRAGNFSFDS 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNT-LMAAKTTTTASMQINLNSSDP 163 N +LV G ++ G+ +T N IS+ N M TTT + NLN+S Sbjct: 123 NGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWFGMEPSTTTQLEIGGNLNASTG 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY--TQDSSDPNSI 221 + ++ + V+D+QG +H ++ F + N W +QD + Sbjct: 183 IGQSISYN------------IIVYDTQGGSHVATITFTRQDPNTWNWSVSSQDPYISSVS 230 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATF---SLSFLNSMQQNTGANNIVAT 278 +T + F A+G + A T +N A L+ + + ++ Sbjct: 231 VAGSTAITFGADGKIAPNTQATGTLTFNMNTAVTNAQIGPVNIDLSKLTMFSTETDLREL 290 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 ++NG + G L S I+ G V G YSN + Q++GQI LA+F N GL G+ ++ T + Sbjct: 291 SKNGNEAGSLQSINIDKYGVVSGIYSNGRRQVIGQIALADFQNPMGLEKVGNTMFINTVN 350 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG ++G AG+G G++ G LE SNV+L+ E V+MI QR +Q+NA+ I D++L L Sbjct: 351 SGEPMIGAAGSGTRGSINPGTLEMSNVNLANEFVDMITTQRGFQANAKVITVSDEMLQDL 410 Query: 399 VNLR 402 VN++ Sbjct: 411 VNMK 414 >UniRef50_A2SKD4 Flagellar basal body and hook protein n=3 Tax=Betaproteobacteria RepID=A2SKD4_METPP Length = 420 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 162/420 (38%), Positives = 228/420 (54%), Gaps = 18/420 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLNAA+ NL++IGNN+AN++T+G KS A F D++A + VG+GV Sbjct: 1 MSFQQGLSGLNAASKNLEIIGNNVANASTFGAKSSRAEFGDVYANALNGSGTNMVGIGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q FT G T T +D+AI+ +GFF++ D Y+RNGQFK+D +VN G Sbjct: 61 LATVAQQFTQGNITTTDNPMDLAINGSGFFQVSDGKNPTMYARNGQFKIDREGFIVNNSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L GYPA G + A + A M ++ + P Sbjct: 121 YKLLGYPADGQGVIVPGQAQAIQLPTAGIAPRATDRIAIEMNLDARQAVTTPATGGIDFD 180 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA-----TTL 228 + +YN SVTV+D++G ++ YF K+G + W VY + P S+ T TT+ Sbjct: 181 DPATYNNATSVTVYDAKGQDVALTYYFQKSGADQWDVYVTANGTPISVDGTGAALPSTTM 240 Query: 229 EFNANGTLVDGAMA------NNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 F ANG+ + A P T + S Q + +Q G Sbjct: 241 TFPANGSAPTAPVGAVPINIPATTNAAGGTTLPITGIELDVTSATQYGSGFGVTDMSQTG 300 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 Y PG L I +G ++ YSN Q++ GQ+ LANF N +GL G+NVW+ T +SG Sbjct: 301 YAPGQLSGISIEANGVIMARYSNGQSKPGGQLELANFRNPQGLQPLGNNVWATTFTSGDP 360 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++G AG GNFG L +GALE SN+DL+ ELVNMI AQR YQ+NAQT+KTQD ++ TLVNLR Sbjct: 361 VVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQRVYQANAQTVKTQDSMMQTLVNLR 420 >UniRef50_C4U020 Flagellar hook protein FlgE n=2 Tax=Yersinia RepID=C4U020_YERKR Length = 437 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 260/437 (59%), Positives = 313/437 (71%), Gaps = 35/437 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQAVSGLNAA++NLDVIGNNIANSAT GFK+G+ SFADMFAGS+ G+GVKVAGITQD Sbjct: 1 MGFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F DGTTT T R LD+AISQNGFFR+ DS G +FY+RNGQFKLDENRN+VNMQGL LTGYP Sbjct: 61 FNDGTTTTTNRRLDLAISQNGFFRMQDSTGGIFYARNGQFKLDENRNIVNMQGLNLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT----------VTPF 170 ATGTPPT+QQGANP +SIP ++ AK TT+ +M NL S+ + F Sbjct: 121 ATGTPPTVQQGANPVPLSIPQGMIPAKATTSGNMVANLTSTHNIIPAETTSSAGVTTPTF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSD-PNSIAKT 224 D+Y+ ++T FDS GN H+++V++VK N+W VYT+DSS P +A+ Sbjct: 181 DPDKPDTYSFVNNITTFDSLGNRHEINVFYVKRSEDAVNGNSWDVYTRDSSAVPAQVAER 240 Query: 225 ATTLEFNANGTLVDGAMAN-------------------NIATGAINGAEPATFSLSFLNS 265 ++ F+ NG LV+ I G +NGA F+L+ S Sbjct: 241 RGSMRFDTNGALVETTNPVITPPATTPVETPTTVPFTLTIPMGIVNGAPAQDFALNVAGS 300 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 QQNTG ++IV Q GY G+ +QIN+DG+VVG YSN+QTQLLGQIV+ NFAN EGL Sbjct: 301 KQQNTGTDSIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQLLGQIVMVNFANPEGL 360 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +SEG+NVW T SSG A+LGTAG+G FGTLT+GALE+SNVDLSKELVNMIVAQRNYQSNA Sbjct: 361 SSEGNNVWKETLSSGNAILGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNA 420 Query: 386 QTIKTQDQILNTLVNLR 402 QTIKTQDQIL TLVNLR Sbjct: 421 QTIKTQDQILQTLVNLR 437 >UniRef50_A4TKA1 Flagellar hook protein FlgE n=34 Tax=Enterobacteriaceae RepID=A4TKA1_YERPP Length = 428 Score = 312 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 258/428 (60%), Positives = 316/428 (73%), Gaps = 26/428 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQAVSG+NAA++NLDVIGNNIANSAT GFK+G+ SFADMFAGS+ G+GVKVAGITQD Sbjct: 1 MGFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQD 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F DGT T T R LD+AISQNGFFR+ DS+G ++Y+RNGQFKLDENRN+VNMQGL LTGYP Sbjct: 61 FNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNLTGYP 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADSY 178 ATGTPPT+QQGANP +SIP +++AK TT+ +M NL S+ + +PF N D+Y Sbjct: 121 ATGTPPTVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSPFDPDNPDTY 180 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSSDPNSIAKTA-------- 225 + ++T FDS GN H+++V++VK T N W VYT+DSS + Sbjct: 181 SFVNNMTTFDSLGNRHEINVFYVKRAEDATDGNTWDVYTRDSSAKVTDPADPTDPAAAAK 240 Query: 226 -TTLEFNANGTLVDGAMANNIAT----------GAINGAEPATFSLSFLNSMQQNTGANN 274 ++ F++NG L + N + G +NGA +F+L+ S QQNTGA++ Sbjct: 241 RGSMVFDSNGALKNVTNGTNATSTTDFTFTIPMGVVNGAPAQSFALNVAGSKQQNTGADS 300 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 IVA Q GY G+ +QIN DG+VVG YSN+QTQLLGQIV+ NF+N EGL+SEGDNVW Sbjct: 301 IVAQNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWK 360 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 TQSSG LGTAG+G FGTLT+GALE+SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI Sbjct: 361 ETQSSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 420 Query: 395 LNTLVNLR 402 L TLV+LR Sbjct: 421 LQTLVSLR 428 >UniRef50_D1NM00 Fagellar hook-basal body protein n=5 Tax=Clostridium RepID=D1NM00_CLOTM Length = 440 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 140/439 (31%), Positives = 215/439 (48%), Gaps = 41/439 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A T +DVIGNN+AN T GFKS +F ++F+ + Sbjct: 4 SMFSGVSGLQAHQTKMDVIGNNVANVNTVGFKSSRVTFQEVFSQTLKGASSPDPTTGRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFK 101 +VGLG+ VA I T G+ T D+AI +GFF + + F ++R G F Sbjct: 64 TNPMQVGLGLGVATIDTLMTRGSVQRTDNPTDLAIEGDGFFIVKGGSSDTFKFTRAGNFG 123 Query: 102 LDENRNLVNMQGLQLTGYPA-----------TGTPPTIQQGANPTNISIPNTLMAAKTTT 150 +D NLV GL + G+ + +++ ++AAK TT Sbjct: 124 IDRLGNLVTGSGLNVYGWQSYTKLPDGTYKFDTESQIEPINLYSDDVNKNKRMIAAKATT 183 Query: 151 TASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT---GDNN 207 A + NL++S + + S+ + + VTV+DS GN++ +++ F KT G Sbjct: 184 YAIFEGNLDASYSIYSSAASGTSSNNRFTMP--VTVYDSLGNSYKINISFWKTDVTGGVT 241 Query: 208 WQVYTQDSSDPNSIAKTATTLEFNANGTLVDG---AMANNIATGAINGAEPATFSLSFLN 264 + DS + + + T+ F+ G +++ + I + G++ L F Sbjct: 242 TWTWQVDSGNGVTASGATGTILFDDQGQVIESSAVTPSITIIPDSSVGSQNINVKLDFS- 300 Query: 265 SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 + ++ AT +GY G LV++ I DG ++G YSN Q Q LG I LA+F N G Sbjct: 301 RLTMYAADSSAKATNVDGYPAGSLVTFSIGSDGMIMGIYSNGQQQPLGLIALASFDNPAG 360 Query: 325 LASEGDNVWSATQSSGVALLGT-AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 L G+N++ T +SG G AGT GTL+ G LE SNVDLSKE MI+ QR +Q+ Sbjct: 361 LEKVGENMYIPTSNSGEFKKGVKAGTEGVGTLSPGTLEMSNVDLSKEFTEMIITQRGFQA 420 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ I T D++L LVNL+ Sbjct: 421 NSRIITTSDEMLQELVNLK 439 >UniRef50_B5YIG4 Flagellar hook protein FlgE n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIG4_THEYD Length = 434 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 136/433 (31%), Positives = 211/433 (48%), Gaps = 37/433 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKV 54 + +SGLNA L VIG+NIAN+ T GFK+ A+FAD+ + + +VG G + Sbjct: 4 SLFTGISGLNANGLALSVIGDNIANANTVGFKASRANFADILSQTLGGASAMQVGRGTMI 63 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 I + FT GT T LD+AI +GFF + NG +Y+R GQF+++++ +V+ G Sbjct: 64 IDIQKLFTQGTLETTSNPLDLAIEGDGFFVVQQPNGPTYYTRAGQFRVNKDGYIVDPNGY 123 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L Y N+ + + T + Q+NL+S + T + S S Sbjct: 124 LLQAYQMDVNGNV---TGAIGNVYLAGLMSDPSATDLITTQVNLDSREDTTTWSFTSGST 180 Query: 175 ---ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY----------TQDSSDPNSI 221 A +YN ++T++DSQGN H + YF KT N W+ + D +S Sbjct: 181 LPVAGTYNYSTAITIYDSQGNPHLVYTYFCKTAANTWEAHVVYNNSATGTNYVEVDFDSG 240 Query: 222 AKTATTLEFNANGTLVDGA-------------MANNIATGAINGAEPATFSLSFLNSMQQ 268 T+ F++NG L D + + P + NS Q Sbjct: 241 TTQPVTIAFDSNGALSDVYVTTPHTPPDPTFRPTAALDFSSWGVTSPQNVDIDLNNS-TQ 299 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 +N +V QNGY G+L++ ++ DG + G ++N Q + + Q+VLA F L Sbjct: 300 YGSSNAVVFQNQNGYSAGNLIAVTVDQDGVISGVFTNGQVKKVAQVVLAKFVAAHNLTKV 359 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G+N++ + +SG G GT G + +LEASNVDL++E + MI AQR YQ+N + I Sbjct: 360 GNNLYLESYASGGPTYGAPGTVGVGKVYANSLEASNVDLAEEFIRMIAAQRAYQANVRVI 419 Query: 389 KTQDQILNTLVNL 401 T D +LN L+N+ Sbjct: 420 TTTDNMLNELMNI 432 >UniRef50_Q8D3G0 FlgE protein n=2 Tax=Enterobacteriaceae RepID=Q8D3G0_WIGBR Length = 410 Score = 310 bits (793), Expect = 9e-83, Method: Composition-based stats. Identities = 177/411 (43%), Positives = 252/411 (61%), Gaps = 10/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F Q ++G+N+AA LDVIGNNIANS T GFKS SF+D+F+GS VGLG +++ +TQ+ Sbjct: 1 MSFIQGINGINSAAQALDVIGNNIANSQTIGFKSSYVSFSDIFSGSMVGLGSQLSNVTQN 60 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F G+ + LD+AIS NGFFRL DS G ++++RNG+FKL+ +R +VN+Q LTGY Sbjct: 61 FASGSMVTGSKNLDMAISGNGFFRLSDSGGKIYFTRNGEFKLNSHRQIVNLQNKFLTGYQ 120 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 A G PP+I G++ NI IP+T M +T + NL S +P + F+ N SYN Sbjct: 121 ARGNPPSIDSGSSIENIIIPSTSMNPVVSTEGEIHGNLKSDVDVPKNSIFNIKNPKSYNF 180 Query: 181 KGSVTVFDSQGNAHDMSVYFVKT-GDNNWQVYTQDSSDP-----NSIAKTATTLEFNANG 234 + +DS G H + ++FVK NW V+ D + P +I + F+ NG Sbjct: 181 TTQLEAYDSLGKKHVIKIFFVKQEAQGNWMVHGYDETSPIVDDSKNIKTNPILISFDENG 240 Query: 235 TLVDGAMAN---NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 L +N +I +++G++P ++ L M Q + N I NG+ G Y Sbjct: 241 NLKKSENSNKYISIDGSSLDGSDPLKVEIN-LEEMTQYSSDNQINYQKINGHGVGKFNDY 299 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 ++D G ++ NYSN QTQL+ QI +ANF NN GL G+N W + SG A++G + TG+ Sbjct: 300 NVSDSGKIIANYSNGQTQLIAQIAMANFTNNLGLTPNGENCWLESAESGPAIIGLSETGS 359 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG ++ LE+SNVD+S ELV M+ Q NYQSNAQTIKTQDQ+L LVN++ Sbjct: 360 FGRISGQKLESSNVDISNELVKMMTQQSNYQSNAQTIKTQDQLLQILVNMK 410 >UniRef50_A1HN32 Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN32_9FIRM Length = 420 Score = 309 bits (792), Expect = 9e-83, Method: Composition-based stats. Identities = 134/428 (31%), Positives = 197/428 (46%), Gaps = 39/428 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DVIGNNIAN T GFK+ +F D+ + + Sbjct: 4 SLFAGVSGLRNHQTRMDVIGNNIANVNTIGFKASRVNFQDILSQTMQGASSGIGNQGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLD 103 ++GLGV +A I FTDG+ TG+ D++I GFF L G ++R G F D Sbjct: 64 PIQIGLGVSIASIDTIFTDGSFQPTGKQTDLSIQGKGFFVLSPDGGKTEVFTRAGNFDFD 123 Query: 104 ENRN-LVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSS 161 N +V G ++ G+ A + T I IP T M A+ T + NL Sbjct: 124 RLGNFIVPGTGYKVVGWKADSNGNIDTDPSKRTTIDIPVGTQMPAQATKAITFANNL--- 180 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 SA A+ K S ++D+ G + + V F KTGD W ++S+ Sbjct: 181 ---------SADAANGTTVKVSYDIYDNLGKRYTLPVVFTKTGDTTWDYTISNTSEYTVA 231 Query: 222 AKTATTLE-----FNANGTLVDGAMANNIATGAINGAEPATFSLSFL--NSMQQNTGANN 274 AT++ A G L S L + + Q G Sbjct: 232 TLPATSVTGRLTFDAATGKLSSTTPPTVTTIDISYTTPAQKVSGIQLKFDQVTQYGGDTT 291 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 + Q+GY PG L I+ +G +VG +SN +T+ L Q+ LA F N GL GD++++ Sbjct: 292 LQIVDQDGYPPGSLEGVTIDPNGVIVGRFSNGKTRNLAQVALATFNNPAGLTKIGDSLYA 351 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 + +SG +G G+G G L G LE SNVDL++E NMI+ QR +Q+N++ I D++ Sbjct: 352 VSSNSGTPEIGVTGSGGRGKLNPGTLEMSNVDLAQEFSNMIITQRGFQANSKIISVTDEM 411 Query: 395 LNTLVNLR 402 L L NL+ Sbjct: 412 LQELANLK 419 >UniRef50_B4UFG1 Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=B4UFG1_ANASK Length = 428 Score = 309 bits (792), Expect = 9e-83, Method: Composition-based stats. Identities = 133/425 (31%), Positives = 219/425 (51%), Gaps = 27/425 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKVA 55 A S +GL A++ L V+G+NIAN+ T GFKSG A+F D + S ++GLG ++A Sbjct: 6 ALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSRLA 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVD---SNGSVFYSRNGQFKLDENRNLVNMQ 112 G+ + T G +TG D+A+ NGFF + FY+R+GQF +D++ LVN++ Sbjct: 66 GVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVNLE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GL++ G+PA + P ++ + + TT +++ NL + +PT A Sbjct: 126 GLRVQGFPADPSGAL---AGLPDDLLVGTASAQPRATTRLTLKANLQADAAVPTAAWDPA 182 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK-------TA 225 + + N ++TV+D+ G H + VYF KTGD W + + Sbjct: 183 NPGATSNFSTTMTVYDALGAGHAVQVYFRKTGDGAWDWHALTDGAGVAGGTAGQLTQIAG 242 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSL--------SFLNSMQQNTGANNIVA 277 TL F G L ++ +P FS + L + Q + + Sbjct: 243 GTLAFGDGGELTSMTQTSSFTPAGQAAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTF 302 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 Q+GY G L S ++ +G + G ++N QT++LGQ+ +A FA + L G N+ T Sbjct: 303 IGQDGYGSGQLASVRVGPEGVISGVFTNGQTRVLGQVAVAGFAAPDQLDRAGGNLLQQTP 362 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG ++G AG+G ++ G+LE SNVDL+++ V +I AQR +Q+N++TI T DQ+L+ Sbjct: 363 GSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSE 422 Query: 398 LVNLR 402 L+ ++ Sbjct: 423 LIAMK 427 >UniRef50_A1WUE2 Flagellar basal body FlaE domain protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUE2_HALHL Length = 418 Score = 307 bits (786), Expect = 4e-82, Method: Composition-based stats. Identities = 143/422 (33%), Positives = 228/422 (54%), Gaps = 24/422 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F+ +++G+N+A+ +L+ NN+AN+ T GFK A F D+FA VG G + Sbjct: 1 MSFNISLTGINSASKDLETTSNNLANAGTTGFKESRAEFNDLFAMGPMGIPQLAVGQGSR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q F+ G+ T R LD+ I GFFR+ D +G V Y+R GQF++D + +VN G Sbjct: 61 LANVGQMFSQGSFDFTERSLDLGIEGRGFFRMED-DGEVSYTRAGQFEVDRDGYIVNNTG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT-VTPFSA 172 +LTG+ I G + + +P + A+ + + NL++ + F Sbjct: 120 KRLTGFQTDEDGSRIGDGRD--QLQLPTDGIPARASENVEIAANLSADADVIDEGVAFDP 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS------DPNSIAKTAT 226 + +++ + + T++DSQG+A D + YF K G+N W VYTQ D Sbjct: 178 DDNETFTESTTTTLYDSQGSARDATFYFRKVGNNEWDVYTQVDGVDYEQADTEGDYFGPH 237 Query: 227 TLEFNANGTLVD------GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 L F+ +G+LVD G +A+ + + + F M Q N+ +Q Sbjct: 238 RLSFDTSGSLVDAEGDDEGRIASLEDVPLLAEVDDLDLDIDF-GEMTQFARPFNVTNVSQ 296 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +GY G+ + + DGT++ YSN + Q +GQ+ L +F + E L S G+ W AT+ +G Sbjct: 297 DGYAAGEFENINVEGDGTILARYSNGEAQAVGQVALTSFPSEEKLQSVGETSWQATRDAG 356 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 L+G G G FG + NGALE SNV++S +LVNMI AQRN+ +NAQ + TQDQ+ ++N Sbjct: 357 DPLIGVPGQGQFGRVENGALEQSNVEVSDQLVNMITAQRNFSANAQMVSTQDQVTQEILN 416 Query: 401 LR 402 +R Sbjct: 417 IR 418 >UniRef50_B9L4C8 Flagellar hook protein FlgE n=3 Tax=Bacteria RepID=B9L4C8_THERP Length = 423 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 130/430 (30%), Positives = 196/430 (45%), Gaps = 40/430 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL A T +DVIGNNIAN T GFK G F D+ + Sbjct: 4 SMFSAISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRFTDILSQLVRGASGPTETRGGIN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG V + T G TG+ D+AI +GFF + D + Y+R+G F + Sbjct: 64 PLQIGLGAVVGAVDTIHTQGALQLTGKPSDLAIQGDGFFVVSDGS-QTLYTRDGAFDIGS 122 Query: 105 NRNLVN-MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 + LVN G + G+ A G + A TT ++Q NLN++ Sbjct: 123 DLRLVNPSNGFYVLGWQADANGNVDTAGPVGPITIPIGQQLDAVPTTQITVQGNLNANQD 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 A + + V++ DS G H+ + F K G N W Q+ + Sbjct: 183 ----------PAATPHFVTKVSITDSLGKRHEFYILFDKVGTNTWNYTLQEDDPRTTSTT 232 Query: 224 -----------TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 + TL F+A+G L A + ++ +++ S A Sbjct: 233 EDDPDFALGGTPSGTLVFDADGNLDLAASNISAVDLDSTAGGASSITVTPDFSRLTQLAA 292 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 NG G L ++ ++ G V+G YSN T+++GQI LA F N GL G N Sbjct: 293 PYSANAAANGAPAGSLTTFTVSQSGQVLGIYSNGVTKVVGQIALALFTNPGGLMKVGGNA 352 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 + T +SG ++G A +G G + +G LE SNVDL++E +MI+AQR +Q+N++ I T D Sbjct: 353 YLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDLAQEFTSMIMAQRGFQANSRVITTSD 412 Query: 393 QILNTLVNLR 402 ++L LVNLR Sbjct: 413 EVLQELVNLR 422 >UniRef50_B0RT16 Complete genome, strain B100 n=13 Tax=Xanthomonadaceae RepID=B0RT16_XANCB Length = 407 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 153/412 (37%), Positives = 226/412 (54%), Gaps = 15/412 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 MAF+ ++SG+NAA +L+V NNIAN T GFK A FADMF + VG GV+ Sbjct: 1 MAFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ + Q F+ G TGR LD+AIS GFF + SNG+ Y+R G F+ D N ++N QG Sbjct: 61 VSNVAQQFSQGNIDPTGRSLDLAISGEGFFAVS-SNGAKMYTRAGNFQTDANGYVINPQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L + + +++ + T K+T+T ++ L + PTVTPF+ + Sbjct: 120 ARLQVFAPNPSGNGFDV-GRLSDLQLLTTDSPPKSTSTVNLAFTLPGNASAPTVTPFNPA 178 Query: 174 NADSYNKKGS-VTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSIAKTATTLEFN 231 + +Y+ + V+DS G +H + YFVKT N WQV+ S TTL+F+ Sbjct: 179 DDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDG---SAVGAPTTLQFS 235 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFL-NSMQQNTGANNIVATTQNGYKPGDLVS 290 G+L A S+ + Q A + T Q+GY G L Sbjct: 236 DTGSLTTPANGIVAMDPFTPSTGAGVLSMQLNVSGSTQYGEAFALRDTRQDGYASGKLNE 295 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 I+ G V YSN + LGQ+ L +F N +GL S+G+N+W+ + +SG A +G T Sbjct: 296 ISIDTSGVVFARYSNGADKALGQVALNSFVNPQGLQSQGNNMWAESYTSGAARVGAPDTS 355 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + G + +G+LEAS VDL+++LVNMIVAQRN+Q+N+Q I TQDQ+ T++N+R Sbjct: 356 DLGQIESGSLEASTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINIR 407 >UniRef50_A9IKQ4 FlgE protein n=2 Tax=Bordetella RepID=A9IKQ4_BORPD Length = 413 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 184/419 (43%), Positives = 243/419 (57%), Gaps = 23/419 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q +SGLNAAA NLDVIGNNIANS T GFKS TASFAD++A S+VGLGVKV+ I Q Sbjct: 1 MGFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASSRVGLGVKVSAINQR 60 Query: 61 FTDGTTTNTGRGLDVAISQ-NGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G T TG D+AI GFFRL D +G VFYSRNG+F +D++ LVN QG +LTGY Sbjct: 61 FSVGNVTVTGGEYDIAIDGPKGFFRLTDPSGGVFYSRNGEFLVDKDFYLVNAQGYRLTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 A G+ P ++ +P +A K T A +Q NLN++ P +PF + A + Sbjct: 121 AAGA------VGSAPVDLRLPQGNIAPKPTDAAGLQTNLNANADAIDPATSPFDPTLAST 174 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-------------TQDSSDPNSIAKT 224 Y TV+DS GNAH ++ YFVK + +++ + Sbjct: 175 YTDSVPTTVYDSLGNAHQLTQYFVKRAGDTVTNESVYEVYYTLDGEAMDPTTEAAGVWGG 234 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPAT-FSLSFLNSMQQNTGANNIVATTQNGY 283 ATTL F+A G L + PA +++ G++ TQNGY Sbjct: 235 ATTLTFDAAGRLTSAPTVDLSFATPGGTTSPADPLAITMSYDGVTQYGSDFSPKITQNGY 294 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G+ IN DGT+ NY+N +T ++G + LANF N +GL G+N W+ T +SG Sbjct: 295 SSGEYSGLSINSDGTLQANYTNGETAIIGTLALANFNNVQGLQPVGNNAWAETGASGQPT 354 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LG GT T+ A+EASNVD+SKELVNMIVAQR YQ+NAQTIKTQD+++ L+N+R Sbjct: 355 LGQPGTNGLATVVGQAVEASNVDMSKELVNMIVAQRTYQANAQTIKTQDEVMQVLMNMR 413 >UniRef50_Q04UG8 Endoflagellar hook protein n=7 Tax=Spirochaetales RepID=Q04UG8_LEPBJ Length = 464 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 135/461 (29%), Positives = 199/461 (43%), Gaps = 61/461 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL +DVIGNNI+N T+GFK+ +F DM + Sbjct: 4 SLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG +A I + T G+ TG+ DVA+S GFF + D + FY+R G F LD+ Sbjct: 64 PQQVGLGSLIAAIDKIMTQGSLQTTGKNTDVAMSGEGFFIVKDGD-KQFYTRAGAFNLDK 122 Query: 105 NRNLVNM-QGLQLTGYPA---TGTPPTIQQGANPTNISIPNTL-MAAKTTTTASMQINLN 159 N VN GL++ G+ A I A+ +I IP A+ T+ + NLN Sbjct: 123 NGYYVNPANGLKVQGWNARLDDKGNKFINSSASIEDIIIPVYSKEPARATSQIDFKSNLN 182 Query: 160 SSDPLPTVTPFSASNADSYN---------KKGSVTVFDSQGNAHDMSVYFVKTGDNNW-- 208 SS P N ++ FD QG + + F K DN W Sbjct: 183 SSAPAVPPDATQEEITAMINDPDPKMRRGHVTTIKTFDDQGIQREFKMEFYKVRDNTWKA 242 Query: 209 ------------QVYTQDSSDPNSIAKTATTLEFNANGTLV----------DGAMANNIA 246 V + T F +G LV G + ++ Sbjct: 243 RLSMTDATQLSADVSGTGGQNTQLPGNTELEFGFTPDGKLVYVSDGVDSMNSGKLNAKVS 302 Query: 247 TGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 +F L+ + + Q + A Q+GY G L S+ I++ GT+ G Sbjct: 303 FRIAGNPAVQSFDLNLGEAGMVDGITQFSSDFTTKAVKQDGYTMGYLESFSIDNSGTITG 362 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 +SN Q L +I A F N GL GD +++ + +SG +G AG G + G LE Sbjct: 363 VFSNGVRQPLARIATAVFNNPAGLDKAGDTMFAYSMNSGEPNIGEAGVQGRGKINAGLLE 422 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS + +MIV QR +Q+N++TI T DQ++ ++ L+ Sbjct: 423 MSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQEVLGLK 463 >UniRef50_Q0AA87 Flagellar basal body FlaE domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AA87_ALHEH Length = 430 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 150/437 (34%), Positives = 232/437 (53%), Gaps = 42/437 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F +++GLNAA + L++ G+NIANS+T+GFK FAD+FA S +G GV+ Sbjct: 1 MSFGTSLTGLNAAQSELNITGDNIANSSTWGFKESRPEFADLFASSNLGVTGLAIGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + Q F+ G T LD+ IS GFFRL D +G + Y+R+G F+LD + N G Sbjct: 61 LQNVGQQFSQGQFDFTENSLDLGISGKGFFRLSD-DGDISYTRSGAFQLDREGWITNSAG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP---- 169 +LTG+ A G + G + + +A + TT A +Q NLN+ +P Sbjct: 120 KRLTGFAADGDGNIV--GDGQQELRVETGNVAPEATTEARIQANLNAGAEIPPAYTLDAD 177 Query: 170 ------------------------FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD 205 F + ++N+ S T FDS G H + YF+K D Sbjct: 178 DRLADFDQLEWVGPDENNPVPGAVFDPRDTATFNESTSTTFFDSLGRQHTANFYFIKGND 237 Query: 206 NNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS 265 N+W V+T+ + + + F NG + A T A+ AE F L L S Sbjct: 238 NDWYVHTEVDGEVLN-NGQPQPISFGPNG--LIEGNATFDYTRALADAEDLDFELD-LES 293 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 + Q + TQ+G+ G+ S +++DGT+ ++N Q+++LG++ + F + E L Sbjct: 294 LTQFGTPFAVSDITQDGFAAGEFSSLDVSEDGTIFARFTNGQSEVLGRVGVTKFPSQENL 353 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 GD W AT +G ++GTAGT +FG++ +GALE SNVD+S++LV MIVAQRN+ +NA Sbjct: 354 QPVGDTEWVATFEAGEPVVGTAGTSDFGSIESGALEQSNVDISEQLVKMIVAQRNFSANA 413 Query: 386 QTIKTQDQILNTLVNLR 402 + I T+DQI ++N+R Sbjct: 414 KMISTEDQITQEILNIR 430 >UniRef50_A4G6B1 Flagellar hook protein FlgE n=8 Tax=Betaproteobacteria RepID=A4G6B1_HERAR Length = 418 Score = 305 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 152/422 (36%), Positives = 231/422 (54%), Gaps = 24/422 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLNAA+ +L+ IGNN+ANS T GFK FAD++A + ++G+G + Sbjct: 1 MSFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGTQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q F+ G T + LD+AI+ +GFFR+ S G++ Y+RNGQF+L + + + G Sbjct: 61 IARVAQLFSQGNITASNNPLDMAINGDGFFRMS-SGGTISYARNGQFELSKEGFIQSASG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTGY A + P + I +A + TT +++ L+S + F+ Sbjct: 120 ARLTGYMADANG--VVAIGAPAELKINKADLAPEATTKYELKLTLDSRKNVLNSANFNPD 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP----------NSIAK 223 + ++N SV V+DS GN+H + ++VKT W V+ + P + Sbjct: 178 DPTTFNDSTSVPVYDSLGNSHILRTFYVKTAGGEWDVFATNDGVPIGYDPAAVPPANAPV 237 Query: 224 TATTLEFNANGTLVDGAMANNIA---TGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 T++F G L+ + + P + QQ + + Sbjct: 238 ALGTMQFGPGGVLIPSIPPTPLVVPMDVSTGATTPFNIVIDHTG-TQQFAQSFGVNKQLP 296 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +G+ PG L ++ + DG++VG YSN + +LGQ++L++FAN GL + GDN W T SG Sbjct: 297 DGFPPGTLTAFNVASDGSIVGRYSNGKVNVLGQVILSSFANPNGLQNIGDNQWVETAESG 356 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 VAL G+ G++ + +E SNVDL+ ELVNMI AQR YQ+NAQTIKTQDQIL TLVN Sbjct: 357 VALTSAPGSSGLGSVQSARIEESNVDLTAELVNMITAQRYYQANAQTIKTQDQILQTLVN 416 Query: 401 LR 402 LR Sbjct: 417 LR 418 >UniRef50_A8VS11 DNA topoisomerase I n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS11_9BACI Length = 424 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 130/434 (29%), Positives = 199/434 (45%), Gaps = 47/434 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + + G+N T LDVIGNNI+N T+GFK G +F D+ + Sbjct: 4 SLYSGIGGMNNFQTKLDVIGNNISNVNTFGFKKGRVTFNDLVSQQLAGASSPQEGERGGT 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 +VGLG A I T G+ +TGR LD+AIS +GFF++ D G FY+R G F LD Sbjct: 64 NPRQVGLGGSTASIDTINTQGSLQSTGRDLDMAISGDGFFQVADG-GQNFYTRAGNFYLD 122 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 EN LVN GL+L GY + + + T+ ++ NLN+ Sbjct: 123 ENGMLVNADGLRLQGYGVGDDGAIDEAAGVGDLFIPAGEQVDPEATSQVDLRGNLNADSE 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQV---YTQDSSDPNS 220 + + D G ++ + KT +N W Y + + Sbjct: 183 IGEERTV------------RFFITDPLGGEQEIRLLMTKTAENEWDYSLEYWDNDIEDWD 230 Query: 221 IAKTATTLEFNANGTLVDGA------------MANNIATGAINGAEPATFSLSFLNSMQQ 268 I F+ +GT + + + G + +L+ N + Q Sbjct: 231 ILPDIGQGFFDFSGTEDGVSRGRMNLDNLELIVEDLGFIGGPWEGHEGSLNLNLSN-VTQ 289 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + + + ++NG G L SY +++ G + G +SN + +LLGQ+ L NF N GL+ Sbjct: 290 FSSRSTVEVESRNGSSDGTLESYTVSETGEINGIFSNGEVRLLGQVALVNFNNPSGLSKA 349 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G N++ + +SG +G AG G G+L LE SNVDLS+E MIV+QR +Q+N + I Sbjct: 350 GSNLFEVSNNSGEPQVGLAGIGGRGSLVGATLEMSNVDLSEEFAEMIVSQRGFQANTRMI 409 Query: 389 KTQDQILNTLVNLR 402 T D+IL L+NL+ Sbjct: 410 TTSDEILQELINLK 423 >UniRef50_C4KAU4 Flagellar basal body FlaE domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4KAU4_THASP Length = 450 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 153/451 (33%), Positives = 228/451 (50%), Gaps = 50/451 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF--------AGSKVGLGV 52 M+F Q +SGL+ ++ LD+I NN+AN+ T GFK+G+A F+D+F +G +VG+G Sbjct: 1 MSFQQGLSGLSVSSKALDIISNNVANTNTIGFKTGSAIFSDVFAASLTGSISGKQVGVGA 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + + Q FT G T T LD+AI+ +GFF + NG Y+RNGQF+LD+ + Sbjct: 61 TLGAVRQTFTQGNLTTTNNPLDLAINGDGFFVVSRENGPDVYTRNGQFELDKEGFIRTPT 120 Query: 113 GLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSD--------- 162 G +L G+ + TP + ++ +P T+ + NL+++D Sbjct: 121 GERLKGFQSPVTPGALPTPIGGLKDVQVPIVGSQPMPTSRVEIGGNLDANDLSAAQRYPQ 180 Query: 163 ------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----------TGDN 206 P + +A +YN S+ +DS G +H+++ YF K T +N Sbjct: 181 LFGSTFTFPLPAGENWQDARTYNFSTSIKAYDSLGKSHELTYYFAKVTPTPNDPVNTNEN 240 Query: 207 NWQVYTQDSSDPNSIAKTATTL---------EFNANGTL------VDGAMANNIATGAIN 251 W+V+T T ++ FN GT+ A I Sbjct: 241 TWKVFTSVDGGYPLGVGTDGSIEDPSVIWSLTFNEKGTVNTPIVGPTAANPLAIPASYTP 300 Query: 252 GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 GA+ F + F + M+Q G+ I TQ+GY G+L + DG V G Y+N +T+ L Sbjct: 301 GADRIRFHVDFSD-MRQIGGSYLITELTQDGYTGGELAGVSVGRDGIVTGRYTNGETREL 359 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 Q+ L F N L S G+N W AT SG+ AG G G ++ G +E +NV+L+ EL Sbjct: 360 AQLALQTFRNPNALLSIGNNFWEATTESGLTAPSKAGEGVAGVVSAGMIEDANVELTNEL 419 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 V MIV QRNYQ+NAQ+IK QDQ+L TLVNLR Sbjct: 420 VQMIVQQRNYQANAQSIKAQDQVLQTLVNLR 450 >UniRef50_A1WFE3 Flagellar basal body FlaE domain protein n=7 Tax=Comamonadaceae RepID=A1WFE3_VEREI Length = 426 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 157/426 (36%), Positives = 223/426 (52%), Gaps = 24/426 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGLNAA+ +LDVIG+N+AN+ T GFKSG A FA+M A + G+GV Sbjct: 1 MGFQQGLSGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVD 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 VA ++Q F G+ T TG LDVAI+ GFF L +G+ Y+R+G FKLD++ N++ Sbjct: 61 VAAVSQQFGQGSLTITGNNLDVAINGAGFFTLTLPDGTPAYTRSGNFKLDKDGNMITNDA 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP---F 170 ++ GYP + + + AK T T + NL++ P P Sbjct: 121 ARVMGYPVDPATGLRTGAEPVGMVFPTSAPIPAKQTGTITAAFNLDARAPDAAGNPAAQP 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK----TAT 226 S+ V+DSQG A +++YF KT N DP + Sbjct: 181 PVPATPRTTYGTSINVYDSQGVAKPVNLYFQKTATANTWAVYDRLDDPGATPPVQAMPIG 240 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF----------LNSMQQNTGANNIV 276 + F+ +G + A A+ T L+ + Q + Sbjct: 241 QITFDNDGKITGPAAPAPATGFALPLTIDPTPPNPNGLPAYTVQLKLDGVTQFGTRFAVS 300 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 + +Q+GY G+L I +G ++ YSN T+ GQ+ L+ N +GLA+ G N W AT Sbjct: 301 SLSQDGYTVGELAGIDIESNGMLMTRYSNGVTRSEGQLALSRIRNAQGLAAVGSNNWVAT 360 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG A++GTA GNFG L +GALE SNVDL+ ELVNM+ AQR YQ+NAQT+KTQDQ+++ Sbjct: 361 HASGPAVVGTASDGNFGALRSGALEDSNVDLTAELVNMMTAQRTYQANAQTVKTQDQVMS 420 Query: 397 TLVNLR 402 TLVNLR Sbjct: 421 TLVNLR 426 >UniRef50_Q3A5C5 Flagellar biosynthesis, hook protein n=2 Tax=Desulfuromonadales RepID=Q3A5C5_PELCD Length = 413 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 131/412 (31%), Positives = 201/412 (48%), Gaps = 16/412 (3%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +SG+N T + VIGNNIAN+ T GFKS F+D+ A S +VG G Sbjct: 6 ALYSGISGMNTNGTAMSVIGNNIANTNTVGFKSSRTVFSDLLASSVNGSGGASQVGRGTG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQ 112 ++ + F+ GT T D+AI G F + + ++Y+R G F D L N + Sbjct: 66 LSTVDNLFSQGTFETTESQTDLAIEGEGLFVVREEGAESLYYTRAGSFSFDGEGFLTNAE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G ++ G + A+ T+I + T ++ F Sbjct: 126 GYRVQGKTYVNG---VLSSADATDIMVDINAGIEAKMTDKITLSTNLDANEPVITAAFDP 182 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN--SIAKTATTLEF 230 ++ +YN S T++DS GN H M+ YF+K+ DN W D +D S A +LEF Sbjct: 183 NDTTTYNYSNSTTIYDSLGNTHLMTTYFIKSDDNTWDWNVVDENDATLYSSATAGNSLEF 242 Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 + +G + G A G T + + N Q + +++ TQNGY G+L + Sbjct: 243 DTSGKQISGGTATLGPLTPGAGTASQTINFALKN-TTQFANDSQVISQTQNGYGAGNLTN 301 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 I+++G V+ YSN + +IVLA F++ GL EG +++SAT SG +G GT Sbjct: 302 ISIDNEGNVLAKYSNGEEIAKSRIVLAKFSSFSGLRKEGASLFSATGESGPPRIGVPGTE 361 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + ALE S VDL+ E V MI QR +Q+N++ I T D++L+ L+NL+ Sbjct: 362 -LGNIFTNALEQSTVDLAAEFVKMITTQRGFQANSKVITTTDEMLSELINLK 412 >UniRef50_D2LSH1 Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSH1_BACS4 Length = 411 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 140/418 (33%), Positives = 192/418 (45%), Gaps = 42/418 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + G+ + T LDV+GNNIAN T GFK G +F D+ + Sbjct: 18 AMYAGIGGMKSFQTKLDVVGNNIANVNTSGFKKGRVTFQDLVSQQMSGAATPTDNRGGIN 77 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG + I T G+ TGR LD+ I+ +GFF + D G +YSR G F LDE Sbjct: 78 PMQVGLGTSMGSIDTIHTQGSLQTTGRDLDIGITGDGFFIVNDG-GQSYYSRAGNFYLDE 136 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 N +LVN GL++ GY L+ + T A + NLNS + Sbjct: 137 NGDLVNANGLRVQGYSVVDGELDTNTLGPLQI--ASGQLIPPQATDEAQFKGNLNSETQV 194 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 V DS GN H + + F K N W V + + Sbjct: 195 GETVNVPY------------PVIDSLGNMHYLELTFQKQAGNEWTVQ--------AGGQA 234 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 + F +G+ V A + N A P L F M Q + +G Sbjct: 235 LGNVNFGNDGSFV-AADDMTVNFNPGNNANPLNIELDFS-RMSQYARNSTADIHYVSGNV 292 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 G L SY I+ G ++G +SN + +LLGQI LA F N GL+ G+N++ + +SG + Sbjct: 293 DGTLESYSISQAGEIMGVFSNGEVRLLGQIALATFNNPGGLSKSGNNLYMVSNNSGNPQV 352 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G AG G G LT +LE SNVDLS+E MIVAQR +Q+N + I T D+IL LVNL+ Sbjct: 353 GLAGDGGRGMLTGASLEMSNVDLSEEFTEMIVAQRGFQANTRMITTSDEILQELVNLK 410 >UniRef50_Q67K22 Flagellar hook protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K22_SYMTH Length = 418 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 129/429 (30%), Positives = 203/429 (47%), Gaps = 42/429 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------KVGL 50 + VSG+ + T +DVIGNNIAN T GFK+ +F D+F + ++GL Sbjct: 3 SLYSGVSGIRSHQTRMDVIGNNIANVNTTGFKASRVTFTDVFNQTLSSGSALTNPQQIGL 62 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V +G TGR D+AIS G F L +N + YSR G F + + L+N Sbjct: 63 GVAVGSTDLITDEGAFQMTGRAFDLAISGAGLFVLKGANDEILYSRAGMFDWNPDGILIN 122 Query: 111 MQ-GLQLTGYPATGTPPTIQQGANPTNISI-PNTLMAAKTTTTASMQINLNSSDPLPTVT 168 G+++ G+ A A +I I T+ + TT + + NL Sbjct: 123 PALGMKVQGWMAVDGVIGRTDRATMQDIQIVRGTVSLPQATTKVTFKGNL---------- 172 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 A+ + + + +DS G +++ F K N W V D TL Sbjct: 173 --DAAAEEDSTYETIINAYDSLGRDIPITLRFTKGDGNTWTVQYWDPETEG--WSEEHTL 228 Query: 229 EFNANGTLVDGAMANN--------IATGAINGAEPATFSLSFLNSMQQNTGA-------N 273 +F ++G ++ N+ T + A+ +L F Q + + Sbjct: 229 DFGSDGRILGPQGPNDDDPRLWTITITDPNDQADDLEITLDFRKITQAYDASGSGGTARS 288 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 + T++G G L + +N+ G ++G Y+N +QLL QI LA+F N GL EG++ + Sbjct: 289 TVELDTRDGRPMGSLEAVYVNELGEIIGRYTNGDSQLLAQIALAHFNNMAGLIKEGNSTF 348 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 + + +SGV +GTAGTG GTL G LE SNVDL+ + MI+ QR YQ++A+ + T D Sbjct: 349 AESPASGVPQIGTAGTGGRGTLVPGNLEGSNVDLAGQFTEMILTQRGYQASARVVSTADD 408 Query: 394 ILNTLVNLR 402 +L ++NL+ Sbjct: 409 MLQEIINLK 417 >UniRef50_Q0AJ53 Flagellar basal body FlaE domain protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AJ53_NITEC Length = 419 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 151/423 (35%), Positives = 230/423 (54%), Gaps = 26/423 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M F +SGL AA+ LDV GNNIAN+ T GFK A F+D+FA S ++G+G +V Sbjct: 1 MGFQHGLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFSDVFANSLGGGKNQIGIGTQV 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 A I Q+F G T++ LDVAI+ NGFFR ++NG++ Y+RNGQF LD++ LVN Sbjct: 61 AAIAQEFAQGNVTSSDNPLDVAITGNGFFR-TNNNGTISYTRNGQFHLDKDGFLVNANSY 119 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 +TG+ A + I P N+ +P + + K T + +NL++ + +V F A+N Sbjct: 120 NVTGFAADASGQIIPNI--PVNLRLPTSDLTPKPTANFATGVNLDARTSVTSVA-FDANN 176 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANG 234 +Y S +FDS GN+H ++++F KT W V+ ++ + F G Sbjct: 177 PLTYAHSTSGEIFDSLGNSHILNLFFQKTNSTEWGVFATVDGAVDTTNGLPLGVTFGGGG 236 Query: 235 TLVDGAMANNIATGAINGAE----------------PATFSLSFLNSMQQNTGANNIVAT 278 + +N I T + P L Q + Sbjct: 237 STSLTFDSNGIMTTPTGPIDVTVDFQAIDATKWGAIPDLTFSFDLTRSTQFGNKFGVNMM 296 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 Q+G+ G L Y I+D+G + G+Y+N T+ LGQ+ LA F+N GL G+N W+ T Sbjct: 297 NQDGFTSGRLAGYSISDNGEIRGSYTNGVTRTLGQLALAGFSNPNGLKPMGNNQWAETAE 356 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG+ L+GT TG G+L + A+E SNVDL+ ELV++I+ QR YQ+NA+TI+TQD ++ ++ Sbjct: 357 SGLPLIGTPETGVLGSLQSSAVEESNVDLTSELVSLIMTQRVYQANAKTIQTQDAVMQSI 416 Query: 399 VNL 401 +N+ Sbjct: 417 MNI 419 >UniRef50_D2S9L8 Flagellar hook-basal body protein n=3 Tax=Actinomycetales RepID=D2S9L8_9ACTO Length = 408 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 140/419 (33%), Positives = 204/419 (48%), Gaps = 33/419 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + + A+SGL A T LDV GNNIAN T G+K+ F D + Sbjct: 4 SMNSAISGLRAHQTKLDVTGNNIANVNTVGYKASQTVFEDTLSQVVRNGSAPTAQAGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++VGLGVKVAGIT +F G+ NTGR D IS +GFF N Y+R G F D Sbjct: 64 PAQVGLGVKVAGITTNFEQGSAQNTGRSTDFMISGDGFFITQAGN-EQLYTRAGSFSYDG 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 NLV G L G+ AT + +++P +M T ++ NL Sbjct: 123 AGNLVTPDGALLQGWMATD--GVVNTNGPIRQLTVPFGDVMQPTETDNGAVVGNL----- 175 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 S++ A+ + +T++D+ G AH +S+ F KTGDN W V +D ++ + Sbjct: 176 -------SSAAANGTGVQTQMTMYDALGKAHQISLSFTKTGDNTWNVVARDENEAVLAST 228 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 GTL + I A L ++Q G + + +G Sbjct: 229 AGPLAFNPVAGTLPAASRTFQITPDASMAGSWPGQVTIDLADLRQFGGPSGLTPARVDGN 288 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L S ++ DGTV+G YSN + +G++ LA FAN GLA G++ + +SG Sbjct: 289 AMGSLQSISLSGDGTVMGVYSNNLREPIGKLALATFANPGGLAKAGNSSFRVGDNSGQPA 348 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G G G G+L GALE SNVDL++E +IVAQR +Q+N++ I + D++L LVNL+ Sbjct: 349 IGEPGGGGRGSLVAGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSSDEVLQDLVNLK 407 >UniRef50_A4BQF0 Flagellar hook protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQF0_9GAMM Length = 400 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 148/409 (36%), Positives = 229/409 (55%), Gaps = 16/409 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F A++GLNAA+ +LDV GNN+ANSAT GFKS A FAD++A + +G GV+ Sbjct: 1 MSFETALTGLNAASADLDVTGNNVANSATTGFKSSRAEFADIYALSNVGTAQTSIGQGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A +TQ FT G TG LD+A++ GFF L ++NG+ YSRNG F+LD + +V+ G Sbjct: 61 LAAVTQQFTQGQFDFTGNTLDLAVNGTGFFAL-NANGTTAYSRNGAFQLDRDGFIVDADG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L GY A ++ + +A + T + NL++ F A+ Sbjct: 120 HRLNGYQAGSNGAI---SGALGDLQVNIGNVAPQATANIGLSANLDARAATIPTA-FDAA 175 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + +YN S TV+D+QG H ++YF K DN W +Y D + AK T+ F++ Sbjct: 176 DPATYNFSTSTTVYDAQGKDHFATLYFQKQSDNVWDIYA--DGDDGTGAKDPATVTFDSR 233 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 G V A + A + S+ + S+ Q ++ +Q+G+ G + + Sbjct: 234 GEFVSATGATTYSFNYAG-AGTSNISVDYS-SLTQYGSVFDVKELSQDGFSTGQFTNLGV 291 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 DDG ++ ++N Q+Q LGQI L+ F + + L GD W+ T +SG + G+ G Sbjct: 292 EDDGRLLARFTNGQSQTLGQIALSRFPSPQSLQQIGDTHWAETFASGAPVTAAPGSSGVG 351 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T+ GALE SNV+L+++LV+MI AQRN+Q+N+Q I TQDQI +++N+R Sbjct: 352 TIQGGALEKSNVNLTEQLVHMITAQRNFQANSQMISTQDQITQSILNIR 400 >UniRef50_B9Z359 Flagellar basal body FlaE domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z359_9NEIS Length = 419 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 164/421 (38%), Positives = 231/421 (54%), Gaps = 21/421 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M F Q +SGL AA+ L+V+GNN+AN++T GFK + FADM+ + ++ G+GV+ Sbjct: 1 MGFQQGLSGLAAASKQLEVVGNNVANASTNGFKRSRSEFADMYGSSLYGVSNAQAGIGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG---SVFYSRNGQFKLDENRNLVN 110 A ++Q F G +TG LD+AIS GFF L + YSRNG F++D N LVN Sbjct: 61 TAEVSQLFDQGNINSTGNNLDLAISGKGFFVLKSPSAASSQDAYSRNGAFQVDANGYLVN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD-PLPTVTP 169 G +L GY A IQ A P ++ +L++ T+ + +NLNSS + Sbjct: 121 GDGYKLQGYAAQN--GVIQYTATPVDLQFQTSLISPTATSNVDLGVNLNSSAMVISPTPT 178 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN----NWQVYTQDSSDPNSIAKTA 225 + ++ +YN SV V+DS GN HD+S YFVK +W V + Sbjct: 179 VNPTDTSTYNSATSVKVYDSLGNTHDLSFYFVKGTPTATGTDWTVNLYVDGTAVTSPAGP 238 Query: 226 TTLEFNANGTLVDGAMANN---IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 TL F+ NG L G + +N AT P T + L+ Q + + + + +G Sbjct: 239 QTLSFDTNGVLTSGGVLSNIQYTATTPNGSTTPMTIATVDLSKSTQFNSSFGVNSLSADG 298 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS-GV 341 PG L S IN+ G + YSN +T +GQ+ LANF N +GL S G N+W SS G Sbjct: 299 NAPGTLTSTNINNQGIIEATYSNGKTVAIGQVALANFTNVQGLQSMGGNLWKDVASSTGG 358 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A +G + + G + + ALE SNVDL+ ELV+MIVAQR YQ+NAQ+IKT+D IL TL+NL Sbjct: 359 AKVGAPMSADLGEIQSQALEQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTILQTLINL 418 Query: 402 R 402 R Sbjct: 419 R 419 >UniRef50_A4SL12 Flagellar hook protein FlgE n=3 Tax=Gammaproteobacteria RepID=A4SL12_AERS4 Length = 446 Score = 300 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 142/446 (31%), Positives = 203/446 (45%), Gaps = 44/446 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG+NAA +L+V NNIAN T GFK A FAD++A S +VG GV Sbjct: 1 MSFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVA 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNM 111 + F G T LD+AI NGFF D N Y+R G FKL+EN +VN Sbjct: 61 TGAVAHQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNN 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT-NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP- 169 QG L GY N T I +P+ K T NL+ P Sbjct: 121 QGHYLQGYEINTDGTPKAVSINATKPIQVPDRAGEPKMTELVEASFNLSIESKTKPTDPA 180 Query: 170 -FSASNADSYNKKGSVTVFDSQGNAHDMSVYF----------VKTGDNNWQVYTQDSSDP 218 F +N+ ++ SVT++DS G H ++ YF W +Y + P Sbjct: 181 AFDPTNSATFAHSTSVTIYDSLGAPHVITKYFVRHEDPVTPGTPMTPGTWSMYMYEGDKP 240 Query: 219 ----------NSIAKTATTLEFNANGTL------------VDGAMANNIATGAINGAEPA 256 T + F + G L + A NGA+P Sbjct: 241 IDIASGAPSPGPGIPTGVQMTFTSGGKLDPALTIPAPPAPIKTVTLGTAAGIINNGADPT 300 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 L+ + Q N+ TQ+G G+L +I DG V YSN T + + L Sbjct: 301 QAVEIRLSDVTQYNSPFNVTKLTQDGATVGNLTKVEITPDGIVSATYSNATTLKVAMVAL 360 Query: 317 ANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 A FAN++GL GD W + SG AL GT +G G++ + A+E SNVDL+ +LVN+I Sbjct: 361 AKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSAVEQSNVDLTSQLVNLIT 420 Query: 377 AQRNYQSNAQTIKTQDQILNTLVNLR 402 AQRN+Q+N+++++ + T++ +R Sbjct: 421 AQRNFQANSRSLEVNSSLQQTILQIR 446 >UniRef50_A8MHE5 Putative uncharacterized protein n=2 Tax=Alkaliphilus RepID=A8MHE5_ALKOO Length = 448 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 131/444 (29%), Positives = 199/444 (44%), Gaps = 43/444 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVS L A +DVIGNNIAN T GFK +F ++F+ + Sbjct: 4 SMYSAVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVTFQEVFSQTLRGAGRAQEGGRGGT 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFK 101 +VGLG+ V + T G+ +TG D+ I+ GFF + D+ G Y+R G F Sbjct: 64 NPQQVGLGINVNSMDTFHTRGSVESTGYNTDLMINGEGFFVVSDTQGGLQKSYTRAGAFG 123 Query: 102 LDENRNLVNMQGLQLTGYPA---TGTPPTIQQGANPT---NISIPNTLMAAKTTTTASMQ 155 LD N NL+ G + GY A + P N++ A+ + Sbjct: 124 LDANGNLITPDGYYVLGYTAVRDADGQVQKNEKGQPIFEENLTGLRISRDETAPPAATTK 183 Query: 156 INLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS 215 + + + D + + V DS GNAH + V F +T N T Sbjct: 184 ATFTGNIDSNLSADSTGTAGDGGIHETVMKVHDSLGNAHTVKVQFQRTDQGNDTKRTFAV 243 Query: 216 S---------DPNSIAKTATTLEFNANG-----TLVDGAMANNIATGAINGAEPATFSLS 261 + + AT L F++ G L G + AT ++GA+ + L Sbjct: 244 TITELDNVKLGAPIPLEPATPLTFDSAGILDKTALTKGTLKLGHATDGLDGAKQLSIELD 303 Query: 262 FLNSMQQN---TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 F ++ A NGY G + + I+ G + N++N Q+LG++ LAN Sbjct: 304 FTKLTSYAADKGAKSDAAALEINGYASGKIDDFTISTTGEIEANFTNGSRQILGRVGLAN 363 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 F N GL G N++ T +SG + G AGTG FG L GA+E SNVD+S+E +MI Q Sbjct: 364 FKNPAGLLKTGGNMYRETSNSGEVMFGYAGTGGFGALNPGAIEMSNVDISREFTDMITTQ 423 Query: 379 RNYQSNAQTIKTQDQILNTLVNLR 402 R +Q+N++ I T D++L +VN++ Sbjct: 424 RGFQANSRIITTSDEMLQEIVNMK 447 >UniRef50_A1T0J3 Flagellar hook protein FlgE n=18 Tax=Gammaproteobacteria RepID=A1T0J3_PSYIN Length = 398 Score = 297 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 146/401 (36%), Positives = 211/401 (52%), Gaps = 6/401 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SGLNA L+ I NNIAN +TYGFK A FA ++ G + G GV+V+GITQ+ Sbjct: 1 MSFNIAISGLNATNKQLNTISNNIANVSTYGFKESRAEFASIYNGGQAG-GVEVSGITQN 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F +G+ TGR LD+AIS NGFF VD+ G Y+R+G F D++ +V+ G +L GY Sbjct: 60 FDRNGSLEATGRALDLAISGNGFFATVDNKGQQIYTRSGAFSTDKDNFIVSSAGNKLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 Q N +++I ++AK T + N ++ F ++ S+ Sbjct: 120 TVDAKANL--QKGNIDDLAISTASLSAKATDSIEFTANFDARATPVASAAFDPADPTSFT 177 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + FDS GNAH +S YF+ TG N W + D + A +EF G L D Sbjct: 178 SSYTAQAFDSLGNAHTVSQYFINTGSNQWNIKVIAD-DNDVTPDPAPVIEFTTEGLLADT 236 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + + + GA + S Q + NGY G+L ++ D+G + Sbjct: 237 STIPILVSIPALGANLIAVEIDLTGS-TQYGADFGVSTNNPNGYTAGELTGIRVEDNGMI 295 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 ++N Q+QL GQ+VLA+F N L + W T SG + G G+G G LT+ Sbjct: 296 FAQFTNGQSQLQGQLVLADFPNPTALEQSNNTSWMQTFGSGTPVKGAPGSGVLGKLTSNM 355 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 LE SNVDL+ ELV+++ AQRNYQ+N +TI T DQ+ L N Sbjct: 356 LETSNVDLTSELVSLMTAQRNYQANTKTISTADQLTKALFN 396 >UniRef50_A5V5R7 Flagellar basal body FlaE domain protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5R7_SPHWW Length = 435 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 32/434 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV------GLGVKV 54 M+F A+SGL A+ T+L VI NNIAN T GFK F D+ + S + G G ++ Sbjct: 1 MSFYTALSGLKASQTDLAVISNNIANVGTTGFKRSGTEFGDLVSSSPMQSSGIAGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLV--DSNGSVFYSRNGQFKLDENRNLVNMQ 112 GI Q FT G ++ R LD+AIS GFF +SNG V Y+RNG F +D NR LV+ Sbjct: 61 RGIAQQFTQGGLESSERSLDLAISGQGFFVTRASNSNGQVSYTRNGAFSVDANRFLVDSS 120 Query: 113 GLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV---- 167 G L P G ++ +I +P T +K T T + + S+ +P+ Sbjct: 121 GAYLQALPTDTKGNVTATGLSSARSIQLPLTSGTSKATQTIDLSVTFPSAGDVPSTRAIY 180 Query: 168 -----TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-------TGDNNWQVYTQDS 215 F ++ +SYN+ + TV+D+ GNA M+ Y+++ D NW +T Sbjct: 181 STTNPYKFDRTDPNSYNQSTTTTVYDAAGNAFPMTTYYIRENLPGGSVTDTNWTAHTFIG 240 Query: 216 SD------PNSIAKTATTLEFNANGTLVDGAMANNIAT-GAINGAEPATFSLSFLNSMQQ 268 + TL F++ G + A N+ + P F+L++ S + Sbjct: 241 DTEISYDSSAATQPAPLTLTFDSTGAKTAPSGAINLGPLTPAGASAPLEFTLNYSGSTKM 300 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + + + Q+GY G L + + DG +V +SN +Q LG+I+LANF+N EGL Sbjct: 301 SASPFTLTSFDQDGYAAGQLDNVSVGADGLIVATFSNGDSQALGKIILANFSNPEGLRQL 360 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 GD+ W AT SG ++G A + G + +GALE +NVD+++ELV +I AQRN+ +NA+TI Sbjct: 361 GDSKWGATGLSGEPIIGEASSNGTGQIQSGALEQANVDITEELVALIQAQRNFSANAKTI 420 Query: 389 KTQDQILNTLVNLR 402 + + + T+VNLR Sbjct: 421 EAANTMTQTIVNLR 434 >UniRef50_C6P7Q7 Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Q7_CLOTS Length = 420 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 132/429 (30%), Positives = 213/429 (49%), Gaps = 41/429 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVSGL A +DVIGNNIAN T GFK+ +F ++F + Sbjct: 4 SMYSAVSGLKAHQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQGSGGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV +A I FT+G + T D++I NGFF + + G+ Y+R G F D Sbjct: 64 PQQVGLGVAIASIDTLFTNGGSQRTDNPTDLSIDGNGFFIVNNG-GANLYTRAGNFSFDS 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNSSDP 163 N +LV G ++ G+ + N + ISI N +T + NL++ Sbjct: 123 NGDLVTPDGYKVMGWISQDGKTVNTDTGNLSPISIKNWSSTSPASTKLIQLGGNLDAGTS 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ---VYTQDSSDPNS 220 + + ++ VT++DSQG +H ++ F K + + D +D ++ Sbjct: 183 IGSSVSYN------------VTIYDSQGGSHVATIQFTKKDNAGNWDAAITNFDGNDLSA 230 Query: 221 IAKTATTLEFNANGTLVDGAMANNIA-------TGAINGAEPATFSLSFLNSMQQNTGAN 273 T +++F++NG + + A + T T L+++ + + Sbjct: 231 SPVTIGSIQFDSNGLITNPAGSIFSVNVSSLPITNTNATLGDGTNITIDLSNLTMYSSST 290 Query: 274 NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVW 333 +I +++G + G + S I+ G V G YSN +TQ++GQI LA+F N +GL G+ ++ Sbjct: 291 DIRELSKDGNEAGSIESINIDQYGVVSGIYSNGRTQVIGQIALADFQNTQGLEKVGNTMF 350 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 T +SG ++G A TG GT+ G LE SNVDL+ E NMI QR +++N++ I T D+ Sbjct: 351 INTVNSGDPMIGAANTGTRGTINPGTLEMSNVDLANEFANMITTQRGFEANSKVITTSDE 410 Query: 394 ILNTLVNLR 402 IL LVNL+ Sbjct: 411 ILQDLVNLK 419 >UniRef50_B2AI79 FlgE: Flagellar hook protein n=6 Tax=Betaproteobacteria RepID=B2AI79_CUPTR Length = 414 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 190/418 (45%), Positives = 245/418 (58%), Gaps = 21/418 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q VSGLNAAA+NLDVIGNNIAN+ T G+K A FAD++AG+K+GLGV+V + Q Sbjct: 1 MGFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYAGTKIGLGVRVNSVVQS 60 Query: 61 FTDGTTTNTGRGLDVAI-SQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F G +GR LDVAI + NGFFRL G+V+YSRNGQF+ E+ + NMQGLQ+TGY Sbjct: 61 FNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQVTGY 120 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT----VTPFSASNA 175 PA G P + I N M + T++ + + L+S +PT + S + Sbjct: 121 PAGVAGG---AGVQPQPLVISNAQMEPRATSSITAKFQLDSRATVPTQAFASSAGSPPTS 177 Query: 176 DSYNKKGSVTVFDSQGNAHDMSVYFVKTGD------------NNWQVYTQDSSDPNSIAK 223 + +N ++ V+DS GN + YF K D + N++ Sbjct: 178 NMFNYSTAINVYDSLGNKQQLMAYFAKVADSAVAPVHPTVAGGTDWQMYVTDVNGNAVGG 237 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 TL F+ G L A T A L+ Q N++ +QNGY Sbjct: 238 APVTLAFDNAGALQSPAAGAVTLTQPAVNGAQAMAMKLDLSGTTQFGADNDVKQLSQNGY 297 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L+ + +N DGT+ GNYSNEQT+ LGQIV+A F N EGL EGDNVWSAT SSG L Sbjct: 298 TSGSLLGFSVNGDGTITGNYSNEQTKPLGQIVMAAFGNVEGLKPEGDNVWSATGSSGQPL 357 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LG AG G+ GTL + A+EASNVDLS +LVN+IVAQRNYQ+NAQTIK QD ++ TLVNL Sbjct: 358 LGVAG-GSLGTLRSNAVEASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVNL 414 >UniRef50_C6MIR8 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIR8_9PROT Length = 423 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 170/426 (39%), Positives = 224/426 (52%), Gaps = 28/426 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLG 51 M F Q +SGL+AA+TNLDV+GNNIAN T G+K A F D+FA S +VG+G Sbjct: 1 MGFQQGLSGLSAASTNLDVVGNNIANVNTVGYKQSQAQFTDIFANSLDGAGSSRTQVGIG 60 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 +VA + Q F G T LD+AI+ GFFR+ D NG + YSRNGQF+LD N L + Sbjct: 61 ARVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSD-NGVISYSRNGQFRLDGNGFLTDA 119 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G+ LTGY TN+ + T ++ + T+T ++ NL S+ P VT F Sbjct: 120 SGINLTGYAPDANGNI--NTGQATNLKLNTTDISPRVTSTFNLGFNLPSNADAPAVTTFD 177 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--NNWQVYTQDSSDPNSIAKTAT--- 226 A+N S+N+K S FDS GN H + YF K+G N W +Y + Sbjct: 178 ANNTQSFNEKKSGVFFDSLGNDHAFTYYFQKSGTLANTWDMYASVDGAIDPTGVPMGVTL 237 Query: 227 ------TLEFNANGTLVDGAMANNI-----ATGAINGAEPATFSLSFLNSMQQNTGANNI 275 TL F+ NG L N+ GA L + Q I Sbjct: 238 DGAASVTLTFDDNGILTAPTAPFNVSVDLATINPTLGAGSPLVFALDLTTATQFGSQFGI 297 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 +GY G L + + +G + GNYSN Q + LGQ+VLA+F N +GL GD W Sbjct: 298 NLAQSDGYASGRLAGFTTSPEGIIQGNYSNGQNKTLGQVVLASFVNPQGLNPIGDGRWIE 357 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SSG L+G +G G L A+E++NVDL+ ELV MI AQR YQ+NA+TI+TQD IL Sbjct: 358 TPSSGQPLVGEPNSGTLGVLQASAVESANVDLTSELVKMITAQRMYQANAKTIETQDAIL 417 Query: 396 NTLVNL 401 TLVNL Sbjct: 418 QTLVNL 423 >UniRef50_A1K948 FlgE protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K948_AZOSB Length = 445 Score = 292 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 181/445 (40%), Positives = 249/445 (55%), Gaps = 43/445 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 MAF Q +SGLN+++ LDVI NN+AN++T GFK+ FADM+A + +VG+G Sbjct: 1 MAFQQGLSGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGS 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 KVA +TQ FT G T T LD+AI+ NGFFRL S+GS+ YSRNGQF +D N N+VN Sbjct: 61 KVAAVTQSFTQGNLTATNNPLDMAINGNGFFRLSRSDGSIAYSRNGQFDVDRNGNIVNAT 120 Query: 113 GLQLTGYPA-TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G +LTG+ A + P+ I I T +A + T TAS+ +NL+SS+ P Sbjct: 121 GEKLTGFQALDTSGTQTVFSGEPSVIYIDTTNIAPRETGTASVGVNLDSSEKNPLNKNPV 180 Query: 172 ASNAD-----------SYNKKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVY--- 211 S+ + SYN S+TV+DS GNA M++YFV+ N W VY Sbjct: 181 GSDINNFLNYTAIPVESYNYTTSMTVYDSLGNASLMNLYFVRDPDVAGVSPNTWTVYGRL 240 Query: 212 ----TQDSSDPNSIAKTA----TTLEFNANGTLVDGAMANNIATGA------INGAEPAT 257 D +DP T+ F G N + GA+ Sbjct: 241 SNDVVPDPADPALSTGAPLENLGTITFTNLGVPDSTIAGNGVFNVTRTGAQLGTGADDLN 300 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 F+L S Q NT + + Q+GY G L +++ G V G +SN Q + + ++ LA Sbjct: 301 FTLDLSRSTQWNTDSGVTTSPRQDGYTTGRLTGLSVSNTGVVQGTFSNGQVRDIARLALA 360 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 NF++ +GL S GDN+W+ + SG +G GTG G++T G +E SNVDL++ELV+MIV Sbjct: 361 NFSSPQGLTSLGDNLWAESFESGQPTVGAPGTGVLGSVTAGQIEESNVDLTQELVSMIVQ 420 Query: 378 QRNYQSNAQTIKTQDQILNTLVNLR 402 QRNYQ+NAQ+I+TQDQIL TLVNLR Sbjct: 421 QRNYQANAQSIRTQDQILQTLVNLR 445 >UniRef50_C8WYV8 Fagellar hook-basal body protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYV8_DESRD Length = 433 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 128/431 (29%), Positives = 204/431 (47%), Gaps = 34/431 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A VS L A ++VIGNN+ANS T FK+ F+D+ A +VG GV Sbjct: 6 ALYTGVSALGATGEAMNVIGNNLANSNTTAFKASRTLFSDLLASDVSSSSGTSQVGTGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 +A + F+ G T D+AI GFF++ D N G+ Y+R G F ++ LVN Q Sbjct: 66 LASVDTVFSQGGFNPTESSTDLAIEGEGFFKVSDPNTGADAYTRAGGFNFNDEGFLVNPQ 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G ++ GY G T+ N +I + T + ++ + Sbjct: 126 GYRVQGYDVDGDGNTV---GNLKDIYTDLSGSVPAQETGRASLSTNLNASAEVGASFDIN 182 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 A + N S+ V+DS G +H +VYF K G N W + + + ++F + Sbjct: 183 DPAGTSNFSTSINVYDSLGTSHLANVYFTKAGSNAWNYHVTADVGGTNTVLKSHQIKFTS 242 Query: 233 NGTL--------------VDGAMANNIATGAINGAEPATFSLSFLN-------SMQQNTG 271 G L + N N P + ++ Q G Sbjct: 243 TGYLKEVDGNSYMNEKGEIPAGQEGNNVITVKNTGNPINWGNGSDGHVFDVEFNLSQYAG 302 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 + +V+ Q+G+ G L +++ +G V+G+YSN +++ L ++ LA FANN GLA G++ Sbjct: 303 QSELVSKQQDGFSSGALNGIEVDQEGMVIGSYSNGESKDLAKLGLAKFANNNGLAQVGNS 362 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 ++ AT +SG+ +GT G GT+ + ALE S VD++K+ +MI QR YQ+N++TI T Sbjct: 363 LFEATNASGLPAIGTPG-AGVGTIRSNALEQSTVDIAKQFTDMITTQRAYQANSRTITTT 421 Query: 392 DQILNTLVNLR 402 D +L +VNL+ Sbjct: 422 DDMLQEVVNLK 432 >UniRef50_Q5DY15 Lateral flagellar hook protein (FlgE-like) n=39 Tax=Gammaproteobacteria RepID=Q5DY15_ECOLX Length = 400 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 145/403 (35%), Positives = 206/403 (51%), Gaps = 8/403 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++ A +GLNA LD I NNIAN+ T G+KS T F+ M+AGS+ +GV VAG Q Sbjct: 1 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYAGSQA-MGVSVAGTAQS 59 Query: 61 FTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 + G+ +TG LD+AI+ +GFF DS G++ Y+R G F+ D+N +VN G L GY Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT--VTPFSASNADS 177 P + Q T+I I + A+ +++ N ++SD PF +N+ S Sbjct: 120 PVDDSGTL--QTGTVTDIQIKTGNIPAQASSSLIFTANFDASDDAIDRTTVPFDPTNSSS 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 Y + TV+DS GN H + YF KT DN W+V + T G L Sbjct: 178 YTDSYTTTVYDSLGNEHSVCQYFTKTSDNTWEVQYTFDGQQQTGVPAMTLTFDPNTGKLT 237 Query: 238 DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 I + A P ++ + Q ++ NGY Q++DDG Sbjct: 238 SPTTPQTIEF-QTDAAAPIDLTVDYSTC-TQYGSEFSVTTNAANGYASATQNGVQVDDDG 295 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 V YSN + L GQ+VLA F N GL + W T SG L+G G+G GTL++ Sbjct: 296 KVYATYSNGERMLQGQVVLATFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSS 355 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G LE+SNVD++ ELVN++ AQRNYQ+N + I T Q+ + L Sbjct: 356 GVLESSNVDITSELVNLMTAQRNYQANTKVIATSTQLDDALFQ 398 >UniRef50_A3NFX5 Flagellar hook protein FlgE n=13 Tax=Betaproteobacteria RepID=A3NFX5_BURP6 Length = 395 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 140/404 (34%), Positives = 216/404 (53%), Gaps = 15/404 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SG+NA + L+ I +NIAN+ TYGFK+G A+FA M AG++ G + ITQ Sbjct: 1 MSFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQA-NGTYIGSITQS 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 T G TGR LD AI NGFF DS+GS+ ++R G F+ D + +V+ G + GY Sbjct: 60 VGTRGGFLPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRAQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 A+G +I +P AK + + NL++ P F + S+N Sbjct: 120 GASGA---------YGDIRVPTDTEPAKASDSLEYVGNLSADWAAPKNPNFDKDDDTSFN 170 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA---TTLEFNANGTL 236 + TV+DS G H ++ YFVK + V + D + T L+F+ NG L Sbjct: 171 HSVASTVYDSLGRQHIVTQYFVKGQPPSTDVIAYYAMDGEIVGGNTPVQTVLQFDTNGQL 230 Query: 237 VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 ++ G GA +++ Q G NGY G +++D Sbjct: 231 TAPNSPVDLDLGTPAGASALAIKVNYAG-TTQVAGETTTTVNRDNGYAAGVPGEVMLDED 289 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G VV YSN + + +G + LA FAN +GL++ GD W A+ +SG L+G+AG+G G + Sbjct: 290 GGVVVQYSNGKQRKVGSLALATFANQDGLSAVGDTAWRASAASGNPLIGSAGSGALGKVV 349 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G+LE SN D+++ELV+M+ AQRNYQ+N++ + T++Q++ L+ Sbjct: 350 AGSLELSNADVTQELVDMMSAQRNYQANSKVLSTENQMMQALMQ 393 >UniRef50_D2TJ84 Lateral flagellar hook protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJ84_CITRO Length = 400 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 144/401 (35%), Positives = 203/401 (50%), Gaps = 4/401 (0%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++ A +GLNA LD I NNIAN+ T G+KS T F+ M+A S+ +GV VAG Q Sbjct: 1 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTDFSAMYADSQA-MGVSVAGTAQS 59 Query: 61 FTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 G+ +TG LD+AI+ GFF + DS G++ Y+R G F+ D+N +VN G L GY Sbjct: 60 IARGGSMVSTGNALDLAINNGGFFVMCDSAGNITYTRAGSFETDKNGYIVNASGACLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 P G+ I N A + T + + + + PF SN+DSY Sbjct: 120 PVDGSGTLQTGTVTDLQIQTGNIPAQATSNMTFTANFDASDETVDRSTMPFDLSNSDSYT 179 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + TV+DS GN H + YF KT DN+W+V S + T G L Sbjct: 180 DSYTTTVYDSLGNEHSVCQYFTKTDDNSWEVQYSFDGQMESGVEPVTLTFDPNTGKLTSP 239 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 ++ A P + + + Q ++ + NGY Q++DDG V Sbjct: 240 TSPVSVEF-ETGAAAPIDMTFDYSSC-TQYGSDFSVTTNSANGYASATQNGVQVDDDGKV 297 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 YSN + L GQIVLA F N GL + W T SG AL+G G+G+ GTL++G Sbjct: 298 YATYSNGERMLQGQIVLATFPNENGLEAVSGTAWVQTGESGSALIGVPGSGSCGTLSSGM 357 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 LE+SNVD++ ELV ++ AQRNYQ+N + I T Q+ + L Sbjct: 358 LESSNVDITTELVELMTAQRNYQANTKVISTSTQLDDALFQ 398 >UniRef50_Q0AYM8 Flagellar hook protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYM8_SYNWW Length = 475 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 134/474 (28%), Positives = 201/474 (42%), Gaps = 76/474 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DVIGNNIAN T G+K F D + Sbjct: 4 SMYSGVSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGSRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 +GLG+ V+ I Q T TT T + LD+ I +G+F + +++R G F+L Sbjct: 64 TNPMGIGLGMSVSSIDQIHTGAPTTATNKLLDMGIDGDGYFMIRHGQ-QKYFTRAGNFEL 122 Query: 103 DENRNLV-NMQGLQLTGYPATGTPPTIQQGAN----PTNISIPNTLM-AAKTTTTASMQI 156 D NLV G + G+ P T Q + + I L + T S Sbjct: 123 DTKGNLVHTANGYYVQGWVTKIDPVTGQWNLDCSREVETVDISGLLACDPQATKEMSFSG 182 Query: 157 NLNSSDPLPTVTPFSAS--NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN-------N 207 NL++ P V P S + S+ V+DS G + F K + N Sbjct: 183 NLDAEIPFKQVDPEDESIYPGTQESIITSMDVWDSLGKKETVYFRFFKYEVDAGPPRLSN 242 Query: 208 WQVY-------TQDSSDPNSIAKTAT------------------------TLEFNANGTL 236 W V +++ D +S + AT L+F+ NG + Sbjct: 243 WAVDISLNNPLFENAKDYDSTSDFATVDLSVDPPTEETLTTGETEIVRLFNLQFDDNGKV 302 Query: 237 VDGAMANN--------IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 V ++ I A AE F + F +M Q G + + QNGY G L Sbjct: 303 VLAGTPDDPEPKTVDLIIDRASEAAEDIEFKIDFS-AMTQFAGNS-VTEIAQNGYGMGSL 360 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 SY + DG + G+Y N +T+ L ++ LA F N GL G ++ + +SG A++ Sbjct: 361 SSYTVGIDGVIRGSYDNGETRDLARVALARFQNPAGLTQLGGTMFQKSVNSGEAVVSPPT 420 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +LE SNVDLS+E +MIV QR +Q+N++ I T D+++ LVNL+ Sbjct: 421 ESGMGKIVPSSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMIQELVNLK 474 >UniRef50_UPI0001850C8F flagellar hook protein FlgE n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850C8F Length = 426 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 137/426 (32%), Positives = 207/426 (48%), Gaps = 29/426 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + +SG+ A T LDVIGNNIAN TYGFK G +F D+ + Sbjct: 4 SMYSGISGMKNAQTKLDVIGNNIANVNTYGFKKGRVTFQDLMNQTMSGATTPTENRGGQN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG +A I T G+ TGR LDVAIS +G+F + + Y+R G F LD Sbjct: 64 AKQIGLGGTIASIDIISTQGSLQTTGRSLDVAISGDGYFVVRNGQNE-MYTRAGNFYLDS 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 N +LV+ G + GY A I G + ++ MA ++T+ + NL +S P+ Sbjct: 123 NGSLVDGNGNLIQGYQADANG-VIDYGGMTDIVIDSDSTMAPRSTSEVTFNGNLKASAPI 181 Query: 165 PTVTPFSASNADSYNKKG-SVTVFDSQGNAHDMSVYFVKTGDNNWQ-VYTQDSSDPNSIA 222 T + A + + +V DS G+ + V F KT N+W + + + Sbjct: 182 YDATNATTQAATADGRVTVDYSVKDSLGSDIPLKVTFTKTASNSWDTTISYTDTLGATQT 241 Query: 223 KTATTLEFNANGTLVDGAMAN------NIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 T L F+++G L + + P + F + Q + + Sbjct: 242 ITGPALSFSSDGKLDPATVTTLANINLPVNNINPGAVSPQAIDIDFA-QITQFDSSTSAN 300 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 T NG G L S+ I+ G + G YSN + Q + Q+V+A F+N GL S+G N ++A+ Sbjct: 301 INTINGNSEGYLESFTISSSGEINGIYSNGEVQAISQLVMATFSNAGGLLSQGGNTFTAS 360 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG+ G A G + +G+LE SNVDLS+E MI AQR++Q+N + I T D+IL Sbjct: 361 NNSGLPNYGIANE-GRGAIQSGSLEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQ 419 Query: 397 TLVNLR 402 LVNL+ Sbjct: 420 ELVNLK 425 >UniRef50_A0YG82 Flagellar hook protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG82_9GAMM Length = 429 Score = 287 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 221/431 (51%), Gaps = 31/431 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 M+F+ A+SGL AA T+L+V GNNIAN++T GFK A F D++A S G GV V Sbjct: 1 MSFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEFGDVYANSLVSGSNTTGSGVLV 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 I+Q F G + T LD+AI+ GFF + +S+G+ Y+R G F +D+ + N G Sbjct: 61 NSISQQFDQGNISFTDNSLDLAINGTGFFVVAESSGATAYTRAGYFGIDDEGYITNNSGS 120 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L G+ T G P ++ + + +A T+ + NL++ P+++PF+ ++ Sbjct: 121 TLQGFL--PTGTGSGVGGTPADLRVQSGDLAPSATSAVDLLFNLDARGDAPSISPFNPND 178 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPN------------SI 221 AD++N S+T+FDS+G A S ++ KT +N W ++ S D Sbjct: 179 ADTFNSSTSLTIFDSRGQAQVFSTFYEKTAVENVWNMHAYISDDAGNLQNVISPAGGAGG 238 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL----------NSMQQNTG 271 A L F +G L + + Q Sbjct: 239 ANPFFQLTFGTDGLLTGTNPTGLTIDNWNPQGSNQSSTNGSTAIASDFTINIGPSTQFGS 298 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 ++ A QNG+ G L +IN G V Y+N + +LGQ+ +A F+N +GL G+ Sbjct: 299 DFSVAAVDQNGFATGKLTGLEINTTGEVFARYTNGEALILGQVAMALFSNEQGLNPLGET 358 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 W+ + SG ++G TGN G + +GALE SNVDLS+ELV +I+AQRN+Q+NA+TI+T Sbjct: 359 GWAQSFESGEPVVGAPLTGNLGGIQSGALEESNVDLSEELVRLIIAQRNFQANAKTIETA 418 Query: 392 DQILNTLVNLR 402 D + ++N+R Sbjct: 419 DTVTQAIINIR 429 >UniRef50_Q44767 Flagellar hook protein flgE n=26 Tax=Spirochaetales RepID=FLGE_BORBU Length = 442 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 138/444 (31%), Positives = 211/444 (47%), Gaps = 49/444 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DV+GNNIAN T GFK G +F DM + S Sbjct: 4 SLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG+ VA I T G +T + D+ +S NGFF L + ++FY+R G F +D Sbjct: 64 PKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGK-NLFYTRAGAFDVDS 122 Query: 105 NRNLVNM-QGLQLTGYPATG--TPPTIQQGANPTN-ISIPNTLMAAKTTTTASMQINLNS 160 +R+LVN G+++ G+ A I ++ + I AK+T + NL+ Sbjct: 123 DRHLVNPANGMRIQGWMARDLEGEKVINTASDIEDLIIPIGDKEGAKSTKNVTFACNLDK 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT--GDNNWQVYTQDSSDP 218 PL + ++ + +++DS GN + + VK N W + + Sbjct: 183 RLPLIQ-EGANPADIARGTWVVNKSLYDSFGNVSVLELRVVKDLNTPNLWNATVLINGEQ 241 Query: 219 NSIAKTATTLEFNANGTLVD--------------GAMANNIATGAINGAEPATFSL---- 260 NS TL F+ G L N + E T +L Sbjct: 242 NSN----FTLGFDNEGALASLNGQPGQKGDILQIPITFNVLGANVGEVGEQQTVNLKLGT 297 Query: 261 --SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 S+ +S+ Q +++ A Q+GY G + +Y+I+ +G +VG YSN + LG+I LA+ Sbjct: 298 VGSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALAS 357 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 F N GLA GD + T +SG +G G G + +G LE +NVDL+++ +MIV Q Sbjct: 358 FMNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQ 417 Query: 379 RNYQSNAQTIKTQDQILNTLVNLR 402 R +Q+NA+TI T DQ+L LV L+ Sbjct: 418 RGFQANAKTITTSDQLLQELVRLK 441 >UniRef50_A0LT62 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A0LT62_ACIC1 Length = 398 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 138/419 (32%), Positives = 204/419 (48%), Gaps = 43/419 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL A T LDV+GNNIAN T GFK+ F D + Sbjct: 4 SLFSGVSGLRAHQTMLDVVGNNIANVNTVGFKASQVEFEDTLSQMLRAAGAPQGVQGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++VGLGV++A I+ FT G TG D+ I +GFF ++D G Y+RNG F D Sbjct: 64 PAQVGLGVQIAAISTTFTQGPAETTGVDTDLMIQGDGFF-VLDDGGQRVYTRNGAFSFDA 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 N NLV+ G + G+ A+G + T I +P T M TTTA++ NL Sbjct: 123 NGNLVSANGALVQGWLASG--GVVNTTGPVTAIKLPLGTSMPPSATTTATLAGNL----- 175 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 ++ ++TV+D++G A ++ + D + D P + Sbjct: 176 --------PADGSGSPIDNNLTVYDAKGQATQYTLEYSY--DTTSNSWKLDILPPGGGSP 225 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 T L F++ +G + G N + L+ + G N + + +G Sbjct: 226 TNVPLSFDSTTGQYNGTNPQTVTLGGQNISLD-------LSGLTAYGGGNTVEVVSSDGS 278 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L SY I+ DGT+ G ++N Q L +I LA F N GL G + ++ + +SG A Sbjct: 279 AMGSLASYTISPDGTIQGVFTNGMKQPLAKIALATFNNPGGLTKVGTSEYAESVNSGAAQ 338 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G +GTG+ G L G LE SNVDLS+E N+I+A+R +Q+NA+ I T DQ+L LVNL+ Sbjct: 339 IGASGTGSRGQLAAGELEGSNVDLSQEFTNLIIAERGFQANAKVITTSDQVLQDLVNLK 397 >UniRef50_Q47I23 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I23_DECAR Length = 442 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 168/443 (37%), Positives = 234/443 (52%), Gaps = 42/443 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAF Q +SGLN ++ LDV NNIAN++T GFKS + FAD++A S +VG+GV Sbjct: 1 MAFQQGLSGLNTSSKALDVTSNNIANASTVGFKSASTHFADVYAASLAGGGASQVGIGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + I Q FT G T T LD+A++ NGFFR+ +G+V Y+RNGQF LD +VN Sbjct: 61 ASAIAQQFTQGNITTTSNSLDIALNGNGFFRMTQ-DGAVRYTRNGQFHLDSTGYIVNDNK 119 Query: 114 LQLTGYPATGTPPTI--QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 LTGY A + + + + T+ +NLNS+D +P S Sbjct: 120 ENLTGYAADAQGKIVASTPSGIKVDTAPISPQATGATSDGVRFSLNLNSTDKVPGTAWTS 179 Query: 172 AS-----NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN------------WQVYTQD 214 + + +YN +VTV+D+ GNAH M++YFVK+ W V+ Q Sbjct: 180 PTGTNVPDTSTYNYSNAVTVYDTLGNAHTMTMYFVKSAPTAAEVLANPTTTGAWDVHYQV 239 Query: 215 SSDPN-SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN--------- 264 ++ + + F++ G + +A A + + + Sbjct: 240 DGTSEANVGGSPLRMTFDSTGAYLAPTTPATLAVNLNGVATNLSTPANVVTNSATSPLSF 299 Query: 265 -----SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 Q I + TQ+GY G L S I D+G + G YSN QT+ + QIVLANF Sbjct: 300 AMNFAGSTQYGSDFAIASKTQDGYASGQLSSLTIGDNGVIQGVYSNGQTRNMAQIVLANF 359 Query: 320 ANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQR 379 N GL S G+N + T SG +++GT TG FG L +GA+E SNVDL+ ELVNMIV QR Sbjct: 360 QNPNGLMSIGNNDYIETADSGQSMIGTPNTGTFGVLQSGAVEDSNVDLTAELVNMIVQQR 419 Query: 380 NYQSNAQTIKTQDQILNTLVNLR 402 NYQ+NAQ+IKTQDQI+ TLVN+R Sbjct: 420 NYQANAQSIKTQDQIMQTLVNIR 442 >UniRef50_A6GSX9 Flagellar hook protein E n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX9_9BURK Length = 437 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 143/433 (33%), Positives = 211/433 (48%), Gaps = 35/433 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 +F Q +SGLNAA L+VI NN++N++ GFK A F+D+FA + +GLG Sbjct: 8 SFQQGLSGLNAAQRGLEVIANNVSNASVVGFKGSEAEFSDVFARAFNGARSTNGIGLGTS 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A +TQ+F G TG LD+AIS GFF++ NG Y+RNGQF L+ +VN +G Sbjct: 68 LAAVTQNFKQGNINVTGNPLDLAISGTGFFKVQAGNGDNIYTRNGQFTLNNEGVIVNSRG 127 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT-PFSA 172 +L G+P +I +P + T +A++++NL++ F Sbjct: 128 DKLQGFPVDAATGR--PSDVAQDILVPRGSIPPAATRSANLELNLDARATAIDPALAFDP 185 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT------ 226 +N +++N S+TV+D G AH M++Y K N+W V+ + Sbjct: 186 ANLNTFNNSTSMTVYDELGGAHIMAIYMRKEASNDWSVFATVDGTQVDVGTAPVAVTTAP 245 Query: 227 ------TLEFNANGTLVDGAMANNIAT-----------GAINGAEPATFSLSFLNSMQQN 269 L++ +G L N + G P F+ N Q Sbjct: 246 AQSTSANLQYGVDGLLTTPNSGNLTVDMSRFVTASGVPFSSTGTAPNQFTFDMSN-TTQY 304 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + + Q+G++ + + DG + +Y+N Q QI L F N EGL G Sbjct: 305 GSSFVVQNLGQDGFESSPFAGFDVGADGMLTISYANGQLVNHAQIGLYRFPNPEGLQPVG 364 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 N W AT SSG L+ + FG + +GALE SN+DL+ ELV MI AQR YQ+N+QTIK Sbjct: 365 SNGWLATNSSGPELVSLSEDTAFGIIQSGALEESNIDLTAELVAMISAQRVYQANSQTIK 424 Query: 390 TQDQILNTLVNLR 402 TQD I T+ NLR Sbjct: 425 TQDSIFQTITNLR 437 >UniRef50_Q11LP2 Flagellar basal body FlaE n=7 Tax=Alphaproteobacteria RepID=Q11LP2_MESSB Length = 422 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 19/421 (4%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GV 52 M+ VSG+NA A L + +NIANS+T G+K T F+ + G GV Sbjct: 1 MSLYGMMKTGVSGMNAQANRLSTVADNIANSSTNGYKRATTEFSTLVVPGTQGSYNSGGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 G T D+A++ +GFF + SNG + +R G F LD + LVN Sbjct: 61 TSTVRNAVSAQGVLQYTTSITDLAVNGSGFFIVQGSNGQPYLTRAGSFVLDGDGRLVNSS 120 Query: 113 GLQLTGYPATGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV--- 167 G QL GY P+ I+I + A + NL + Sbjct: 121 GYQLMGYSYANGTPSATANGYAGLEPITIKQPELVATPSRNGVFSANLPLDAEIVDTGAG 180 Query: 168 --TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA 225 T ++ Y+ K S+ + ++G + VYF KTGD+ W+V D +D Sbjct: 181 QSTAGDNTSTSEYSVKTSLVAYGNRGEQVLLDVYFTKTGDDEWEVAVFDRADATPDTGFP 240 Query: 226 TT----LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 G + TG L+ + Q + + Sbjct: 241 YASGPLATDQLTFDPTTGKLTGTSVTGVTIPVPGGDDLELDLSQLSQLDSGFQVYDAEVD 300 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G P + S +I+ +G V Y++ + L +I LAN + + L N ++ T +SG Sbjct: 301 GTPPTSIDSIEISAEGIVYAQYADGSFKPLYRIPLANVTSPDQLEVLSGNAFAETAASGA 360 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +G AG+ G + +GALE+SNVD+++EL +MI +QR+Y +N++ +T ++ LVNL Sbjct: 361 VRIGFAGSDGLGDIASGALESSNVDIAEELTSMIESQRSYTANSKVFQTGSDLMELLVNL 420 Query: 402 R 402 + Sbjct: 421 K 421 >UniRef50_A4A615 Flagellar hook protein FlgE n=3 Tax=unclassified Gammaproteobacteria RepID=A4A615_9GAMM Length = 429 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 157/434 (36%), Positives = 230/434 (52%), Gaps = 37/434 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAFS A+SG+NAA +L V+ NNIAN++T GFK+ A FAD++A S +G GV Sbjct: 1 MAFSTAISGINAATADLGVVSNNIANASTTGFKASRAEFADVYATSLLGAGSNAIGKGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +AG+TQ+F G T T LD+AI+ NGFF+L G+V Y+R G F++D LV+ Q Sbjct: 61 LAGVTQEFGQGNITFTNNSLDLAINGNGFFQLS-VEGAVEYTRAGNFQVDREGFLVSNQN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT----- 168 +L G+ G +I I +L+ T+ S+ NL+S + Sbjct: 120 ARLQGFQVDGGG---DVTGQLGDIQIDTSLIDPNPTSNVSLTSNLDSREVTTGTGFATNG 176 Query: 169 -------PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSD--- 217 P +A + +N S T+FDS GN H +S+Y+VKT N ++VY+ Sbjct: 177 PYDAFAVPPTAPSPADFNATTSTTIFDSLGNPHVLSLYYVKTANPNEFEVYSLIDGQSQD 236 Query: 218 -PNSIAKTATTLEFNANGTLVDGAMA--------NNIATGAINGAEPATFSLSFLNSMQQ 268 TL+F +NG + +TGA+NGA TF + Q Sbjct: 237 PGTGTVGDPVTLQFTSNGQFDPASDTQIDVTAWTPVDSTGAVNGAAAQTFVVDLQ-QTTQ 295 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 A + + Q+G+ G L +I++ G Y+N +++ LGQI LA+F N GL Sbjct: 296 FGTAFAVSSVIQDGFAAGQLRGLEIDESGIAFARYTNGESRALGQIALASFNNQNGLQPV 355 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 GD W T SSG +G GT G + + ALE SNV++++ELV++IVAQRN+Q+NAQ I Sbjct: 356 GDTNWVETFSSGSPNVGEPGTSGLGAVQSAALEDSNVEITQELVDLIVAQRNFQANAQVI 415 Query: 389 KTQDQILNTLVNLR 402 + +D I T++NLR Sbjct: 416 QAEDAITQTVINLR 429 >UniRef50_A3JJM5 Flagellar hook protein E n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJM5_9ALTE Length = 435 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 140/439 (31%), Positives = 217/439 (49%), Gaps = 41/439 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 MAF+ +SGL AAA +LDV GNNIAN++T GFK F D++A VG G+ Sbjct: 1 MAFNTGLSGLRAAAVDLDVTGNNIANASTVGFKGSRVQFGDLYANGFLSSGNAPVGDGIS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F G + T GLD AI +GFF ++++ G + YSR GQF D++ +VN Q Sbjct: 61 VQSVKQSFGQGNVSFTDNGLDFAIDGDGFF-VLNNGGELRYSRAGQFGTDKDGFVVNNQN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---PLPTVTPF 170 +++ G+ A ++ I + ++ + TT +NL++ + PF Sbjct: 120 MRVQGFVADAAG---NLSGIRDDLQIGSDNLSPQRTTNLRTDLNLDAREQVLTATPPIPF 176 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-----NNWQVYTQDSSDPNSIAKTA 225 + +YN + +FDS GN H+++ ++ K +NW ++ Q + A + Sbjct: 177 DPLDPTTYNHVTATNIFDSLGNPHEVTQFYTKQAPASGSQSNWLLHLQIDGEAVGGAAGS 236 Query: 226 TT---------LEFNANGTLVDGAMANNIATGAINGAE-------------PATFSLSFL 263 TT L F+ +G L N N L Sbjct: 237 TTTPPNFVPYELVFDQSGNLASADSNANGVISIANWVPKDGDLNANGAASGAGAAFDLNL 296 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 S Q + Q+G+ G L ++ G + Y+N Q++ LGQ+ LA+F N + Sbjct: 297 GSATQYGANFGVNDQRQDGFTTGRLSGLDVSQQGVIFARYTNGQSKSLGQVALASFNNTD 356 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL+ GD W T SG A++G +G G + + ++E SNVDLS ELVN+I+AQRNYQ+ Sbjct: 357 GLSPSGDTSWVETFESGQAVIGRPDSGTLGAIQSSSVEESNVDLSAELVNLIIAQRNYQA 416 Query: 384 NAQTIKTQDQILNTLVNLR 402 NA+TI+T D + T++NLR Sbjct: 417 NAKTIETSDAVTQTIINLR 435 >UniRef50_B2UJX1 Flagellar basal body FlaE domain protein n=3 Tax=Ralstonia pickettii RepID=B2UJX1_RALPJ Length = 402 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 178/410 (43%), Positives = 243/410 (59%), Gaps = 17/410 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGL+AA+ NLDVIG+N+AN+ T G+K TA F D++A S +VG GV+ Sbjct: 1 MGFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQVGQGVE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFF-RLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 V ++Q FT G T TG LD+AI+ GF+ + ++G V YSRNGQF+ D+N +++ Sbjct: 61 VTRVSQSFTQGNVTITGNPLDIAINGTGFYRMVDTASGQVSYSRNGQFQTDKNGYIISAT 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G LTGY T A TN+ IP +A TT + INL+++ PT TPFS Sbjct: 121 GQNLTGYGVDSTGKV--NTAVLTNLQIPVNDLAPLATTNTAFGINLDAAATAPTTTPFSP 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 +N+ ++N S V+D G AH ++ Y+V+T W VY+Q + + TTL FN+ Sbjct: 179 TNSATFNHSVSEQVYDGTGTAHMLTNYYVRTATG-WDVYSQVDGNNPTGGNPVTTLTFNS 237 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG-ANNIVATTQNGYKPGDLVSY 291 NG L ++ ++ A S+ F + Q G + TQ+GY G L SY Sbjct: 238 NGQLTSTPSKIAVSFAGMSIA-----SMDFTGTTQYGGGYNDTAPGVTQDGYATGRLASY 292 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 + DGT+ YSN +T LGQI +ANF EGL + G N W T +SG LGT G G+ Sbjct: 293 SVGTDGTITARYSNGRTATLGQIAMANFKAPEGLQNIGGNQWVETSNSGAPNLGTPGMGS 352 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 FG L + A+E SNVDLS+ELVNMI+AQR+YQ+NAQTIKTQD IL TLV + Sbjct: 353 FGLLQSSAVEQSNVDLSQELVNMIIAQRSYQANAQTIKTQDTILQTLVTM 402 >UniRef50_C2BUK6 Flagellar basal body and hook protein n=3 Tax=Mobiluncus RepID=C2BUK6_9ACTO Length = 484 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 135/482 (28%), Positives = 207/482 (42%), Gaps = 83/482 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +SGL+ T LDV NNIAN T GFKS + F D F+ Sbjct: 4 SLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNERGGM 63 Query: 46 --SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 ++VGLGVK+ ITQ+FT G TGR LD I+ +GF+ L +NGS Y+RNG F LD Sbjct: 64 NPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSFGLD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 +V G + G+ TI P NI++P + + TT N+ + Sbjct: 124 AQGQVVAADGSFVQGWMGDKDG-TINASGTPGNITLPLTKTVEGRPTTKVIYGGNIPADQ 182 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV------KTGDNNWQVYTQDSS 216 T S +++ + V +D +GN HD+ + F + W++ D++ Sbjct: 183 IYMDPTGSKTSPDNAFQRSQIVHAYDDKGNPHDVLLTFARNDFANPGSEPMWELRAYDAN 242 Query: 217 D-------------------------------------PNSIAKTATTLEFNANGTL--- 236 + +F +GTL Sbjct: 243 VFKELDETQREKLTNDGGARIALEVEDGGSVSIGGSKVKPADGDGVLNFKFKTDGTLDED 302 Query: 237 ----------------VDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 V+ ++ +L L+++ G NN Sbjct: 303 SLKAMKTVKFKLDQVNVNETTTPKSSSILQPNVTKQPINLD-LSALTGFGGVNNFGQKQV 361 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 +G G + Y + DGT+ G +SN + L +I +A+FAN GL G + + T +SG Sbjct: 362 DGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGLEKAGSSYFVETGNSG 421 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 +G AGTG G +T GA+E SNVDL+ E N+I++QR +Q+N++ I T D+IL LVN Sbjct: 422 QPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANSRVITTSDEILQELVN 481 Query: 401 LR 402 ++ Sbjct: 482 MK 483 >UniRef50_D0L1M3 Flagellar hook-basal body protein n=5 Tax=Chromatiales RepID=D0L1M3_HALNC Length = 418 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 149/420 (35%), Positives = 216/420 (51%), Gaps = 20/420 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F+ +++GLNAA +LDV NNIAN+ + GFKS A F D++ + + G GV Sbjct: 1 MSFNTSITGLNAAQKDLDVTSNNIANANSTGFKSSRAQFGDIYAVSAYGNSKTATGQGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNM 111 + Q FT G+ T LD+AIS GFF + YSR G +++ +VN Sbjct: 61 TEAVQQQFTQGSLQFTNNSLDLAISGQGFFTFQPTLDSLQSVYSRAGALGANKDGFIVNT 120 Query: 112 QGLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L P + A+ I +P A K TT + NL +S +PTVTPF Sbjct: 121 NGQYLKALPVSANGTLQSTSLASAKPIQLPVAAGAPKATTLVTQSFNLPASATVPTVTPF 180 Query: 171 SAS----NADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSIAKTA 225 + + SY + S V+DS GN H ++ Y+VKT N W VY Q + + + Sbjct: 181 DTTQATPDPASYTQANSQQVYDSLGNTHTLTSYYVKTANPNEWNVYYQVDTQ--TPIQGP 238 Query: 226 TTLEFNANGTLVDGAMANNIATGA---INGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 +TL F+ANG L + A GA P ++ Q N+ A +Q+G Sbjct: 239 STLTFDANGQLPTTPAPFAVTATAASLGTGAAPLNINVQTQGDSTQYNAPFNMAAQSQDG 298 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G L + +G + +YSN Q LG + LANF+N +GL G+N W+ + SG Sbjct: 299 NTTGQLTGVSVGSNGLIQASYSNGQNIPLGMVALANFSNPQGLKQVGNNSWAESVDSGAP 358 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G GTG FG + GALE SNVDL+++LVN+I AQRN+Q+NAQ I+T ++++N+R Sbjct: 359 TAGQPGTGTFGLIQGGALEQSNVDLTQQLVNLITAQRNFQANAQAIQTDKTATDSVINIR 418 >UniRef50_B4RV33 Flagellar hook protein n=29 Tax=Gammaproteobacteria RepID=B4RV33_ALTMD Length = 461 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 142/461 (30%), Positives = 217/461 (47%), Gaps = 59/461 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG++AA +LDV NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLAGGKTKVGDGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + Q F+ G+ T LD+AI+ NGFF V ++ ++R GQFKLD + +VN Sbjct: 61 TQEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNS 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT-NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L G+P + + T + IP++ + + T+ +++NL + D F Sbjct: 121 NGDNLLGFPVNADGTSASVALSTTEPVRIPDSSGSPQQTSEVDIRMNLPAGDAGLDPQDF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDS----------- 215 + + +YN SVTV+DS G++H M+ YF+K G DN W V T Sbjct: 181 NPEDPLTYNAATSVTVYDSLGDSHVMTYYFIKDGSPGVDNEWYVATAIDDTLVDMTDSAG 240 Query: 216 ------------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGA-------------- 249 A TA+ L F+ G + AT Sbjct: 241 NDTDPATAVNSVGGNTGNAVTASKLIFSQGGDFSGMETPDGNATLDFKMQTEALGAGILA 300 Query: 250 INGAEPATFSLSF--------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 S+ F N Q A + + Q+G G L I DG V Sbjct: 301 NGSDPNQQISIDFNLDVNSATPNEPTQFASAFEVTSLEQDGLPVGRLTGIDIGPDGLVRA 360 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 +SN ++ + ++ L F+N +GL E W + SG AL G A TG FG + + ALE Sbjct: 361 TFSNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALE 420 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +NV+L+ EL++MI+AQRN+Q+N++ ++ + + T++N+R Sbjct: 421 QANVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNIR 461 >UniRef50_B0THB1 Flagellar hook protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THB1_HELMI Length = 442 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 128/452 (28%), Positives = 194/452 (42%), Gaps = 65/452 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+ L T +D IGNNIAN T GFK +FAD + Sbjct: 4 SLFSGVTALRNHQTRMDTIGNNIANVNTIGFKKSRVTFADALNQTIRGASSPQGGRGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG+ +A + FT + TG+ D+AI +GFF L D G+ +Y+R G F LD Sbjct: 64 PMQVGLGMNIATMETVFTPASVQGTGKNSDLAIEGDGFFLL-DDGGARYYTRAGNFDLDT 122 Query: 105 N-RNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSD 162 + G+++ GY A T I +P I+ M A T NL S Sbjct: 123 EYNFIRTDNGMKVMGYIADATG-EIDANGDPVPINIKDKLQMTASATNRVEFNKNLYSLQ 181 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK----TGDNNWQVYTQDSSDP 218 A + + S+ ++DS+G H++ + F T N WQV + +++ Sbjct: 182 ------------ASAKPIQKSIEIYDSRGGKHNLVLTFKNVSNATTPNTWQVSARITTED 229 Query: 219 -------NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM----- 266 + T+ F+ NG +++++ ++ Sbjct: 230 PQSKKITTANGYIIGTMLFSTNGLFKSFQVSDSVDFKFPGLGVDDIGAMPNGTYTAKFEI 289 Query: 267 ----------------QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 Q I +QNGY GDL SY I+ G + G YSN Q + Sbjct: 290 PDVKKDTKLYLDLHAITQFNSETTIDKLSQNGYADGDLKSYAIDAAGVLTGTYSNGQNRK 349 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 + Q+ + F+N GL G N+++ T +SG G G G +T GALE SNVDLS+E Sbjct: 350 MAQVAVTTFSNPAGLFKAGSNLYTRTNNSGEPKTGQPAVGGRGAITPGALEMSNVDLSQE 409 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +MI QR +Q+N++ I D +L LVNL+ Sbjct: 410 FTDMITTQRGFQANSRIISVSDSMLEELVNLK 441 >UniRef50_Q1ZPI3 Flagellar hook protein n=3 Tax=Photobacterium RepID=Q1ZPI3_PHOAS Length = 467 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 128/468 (27%), Positives = 220/468 (47%), Gaps = 67/468 (14%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+ + A+SGL AA +L+ NNIAN+ T+GFK A F D+++ S G GV+ Sbjct: 1 MSMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF---YSRNGQFKLDENRNLVN 110 + + Q F +G++ T LD+ +S +GFF + D+ +RNG F L+ LVN Sbjct: 61 TSTVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 +G L GYP T+ ++ I + + T + +NL + + P F Sbjct: 121 SEGKFLLGYPVNKDSNTVASY-EAKSMKIDDVFGQPTKSGTIKVSLNLPNKETAPKSNSF 179 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFV--------KTGDNNWQVYTQ--------- 213 + DS+NK S T++DS G + M+ Y+V T N W+V+ Sbjct: 180 DFKDPDSFNKSTSSTIYDSLGKPYKMTTYYVAKYDPNAVPTNANTWEVHQTVTNNSGEER 239 Query: 214 ----------------DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE--- 254 D++DP + T + F+ NG G + AT AI Sbjct: 240 LLKPDPTKIPPAYQVIDNTDPTAPVVTGYRMRFDQNGQPYPGDPGDPTATPAIPPTPASP 299 Query: 255 --------------------PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 + ++++ + Q + +G G L I+ Sbjct: 300 LNIQMETFASAGIDVGGADPTQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDID 359 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 +G ++ +YSN + ++G++ LA +N +GLA G +W+ TQ SG A+ G A G+FG+ Sbjct: 360 PEGNILASYSNGKDIVVGRVALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGS 419 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +G LE SN+D+++ELV++I AQRN+Q++++ + +Q+ ++ +R Sbjct: 420 VKSGTLEQSNIDMTQELVDLITAQRNFQASSRALDVNNQLQQNILQIR 467 >UniRef50_C6WVA7 Flagellar basal body FlaE domain protein n=3 Tax=Betaproteobacteria RepID=C6WVA7_METML Length = 421 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 172/424 (40%), Positives = 233/424 (54%), Gaps = 25/424 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGV-------K 53 M+F Q +SGLNAA+ L+VIGNN++N+ T GFK A FAD+FA S G G Sbjct: 1 MSFQQGLSGLNAASKQLEVIGNNVSNANTVGFKQSRAEFADVFANSITGGGGSQIGIGTN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q FT G T T LD+AI+ NGFFR+ S G+V Y+RNGQF+LD+ +V+ Sbjct: 61 LATVAQQFTQGNITATNNSLDIAINGNGFFRMS-SGGAVTYTRNGQFQLDKQGFIVDSAS 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP-LPTVTPFSA 172 +LTGY A + ++ I + TT INL+S + +P FS+ Sbjct: 120 KRLTGYAADANGNIL--SGAAVDLQINTADIQPVATTKIEGTINLDSRNNPMPAAPVFSS 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT------ 226 ++ +YN +VTV+DS GN+H + +F KT N W +YT P + AT Sbjct: 178 TDPTTYNNSTAVTVYDSLGNSHTLQNFFRKTAANVWDIYTTVDGAPIPASGAATAQMTFT 237 Query: 227 --------TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 T A G N AT + + + Q A +I A Sbjct: 238 GTGVSPTITPTAPATGIPSVTFTPMNTATTPVANGAANVTTTIDYSKSTQFGSAFSINAL 297 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +Q+G+ G L + DGT+VG YSN Q++ LG++VL++F N GL S G N W+ + S Sbjct: 298 SQDGFTSGRLSGFNTASDGTIVGRYSNGQSKNLGRVVLSSFTNPNGLQSLGGNAWAVSAS 357 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG AL G G+G G L + A+E SNVDL+ ELVNMI AQR YQ+NAQTIKTQDQ+L TL Sbjct: 358 SGPALTGAPGSGLLGVLQSSAVEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVLQTL 417 Query: 399 VNLR 402 VNLR Sbjct: 418 VNLR 421 >UniRef50_A7K5D1 Flagellar hook protein FlgE n=56 Tax=Vibrionales RepID=A7K5D1_VIBSE Length = 437 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 130/439 (29%), Positives = 214/439 (48%), Gaps = 39/439 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+ ++SGL+AA +L+ NNIAN+ TYGFK A FAD+++ S G G + Sbjct: 1 MS-YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQ 59 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFKLDENRNLVN 110 + + Q F +G++ T +D+ +S GFF + + +RNG F L++ +V Sbjct: 60 ASQVAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNELTRNGAFHLNKENYMVT 119 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 L GY + + P I+IP K T + +NL ++ L T F Sbjct: 120 ANDEFLLGYQVDPSSGEV-SSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQF 178 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVYTQD-------------S 215 S+ D+YN+ S T++DS G ++ ++ Y++K T N W Y Sbjct: 179 DFSDPDTYNRSTSSTIYDSMGQSYKLTTYYLKDQTQPNTWNTYYTVTDKEGEKPLNVAAG 238 Query: 216 SDPNSIAKTATTLEFNANGTLVD------------GAMANNIATGAINGAEPATFSLSFL 263 T++FN +GTL G A N +NGA+PA L Sbjct: 239 DAQTPTGHVGHTMKFNNDGTLASLNNGQPITSVALGDPATNTTPVDMNGADPAQTLNFGL 298 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 S Q + ++G G L +++G+V+G YSN + LG++ L N + Sbjct: 299 GSATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVMGTYSNGENVTLGRVALVRVPNEQ 358 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL +G W +TQ SG + G + G+FGT+ NG LE SN+D+++ELV++I AQRN+Q+ Sbjct: 359 GLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQSNIDMTQELVDLISAQRNFQA 418 Query: 384 NAQTIKTQDQILNTLVNLR 402 N+++++ +Q+ ++ +R Sbjct: 419 NSRSLEVHNQLQQNILQIR 437 >UniRef50_O07884 Flagellar hook protein flgE n=7 Tax=Treponema RepID=FLGE_TREPA Length = 463 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 127/461 (27%), Positives = 197/461 (42%), Gaps = 62/461 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSG+ T +DVIGNN+AN T GFK G +F D+ + Sbjct: 4 SLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSAAARPNEEVGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV +A I T G TG DV+I +GFF L F++R G F +D Sbjct: 64 PKEVGLGVLIASIDTVHTQGALQTTGINTDVSIQGSGFFVLKSGE-KTFFTRAGAFGVDN 122 Query: 105 NRNLVNM-QGLQLTGYPATG--TPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNS 160 LVN G+++ G+ A I A ++ IP + A+ T+T NL+ Sbjct: 123 AGTLVNPANGMRVQGWMAQDVAGERLINSSAQTQDLVIPIGQKIDAQQTSTVHYACNLDK 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 P + ++ V+DS G H + + F + N Q + DP + Sbjct: 183 RLPELA-ADANEADVRKSTWTTDFQVYDSFGQQHTLQINFSRVPGTNNQWQATVAVDPGT 241 Query: 221 --------------IAKTATTLEFNANGTLVDGAMANNIATGAIN--------------- 251 A + F+ G L TG Sbjct: 242 EVDTQTRVGVGTSDGAANTFIVNFDNFGHLASVTDTAGNVTGPTGQVLLEASYDVVGANP 301 Query: 252 ----------GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 + N++ Q + A Q+GY G L +++I+ G + G Sbjct: 302 DDAGQVTRHAFTLNLGEIGTARNTITQFAERSTTKAYRQDGYAMGYLENFKIDQSGVITG 361 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 YSN +Q +GQ+ LA FAN GL G+N + + +SG+A + T+G G L G LE Sbjct: 362 VYSNGVSQDIGQLALAGFANQGGLEKAGENTYVQSNNSGIANISTSGVMGKGKLIAGTLE 421 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDL+ + +MI+ Q+ +Q+ A+TI+T D +L+T+++L+ Sbjct: 422 MSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLSLK 462 >UniRef50_Q1QW31 Flagellar basal body FlaE n=2 Tax=Gammaproteobacteria RepID=Q1QW31_CHRSD Length = 387 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 164/403 (40%), Positives = 228/403 (56%), Gaps = 17/403 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M FSQ++SG+NAA++ LD IGNNIANS T GFKS + FAD+FA S+ GLG +VAG QD Sbjct: 1 MGFSQSLSGVNAASSQLDTIGNNIANSQTVGFKSSSVQFADIFANSQ-GLGTRVAGKLQD 59 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 F G+ TGRGLD+AI+ +GFF+ N + YSRNGQ + + N QG +L Sbjct: 60 FGTGSLETTGRGLDLAIAGDGFFQFTQ-NEQLAYSRNGQLSMSADGYFENAQGARL---- 114 Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 + + A+ TT NLN+ F+ +D+Y+ Sbjct: 115 ---------TDQQGEPLQVTQFSQGAQATTGVETAFNLNAETEALAPNNFNQDQSDTYSY 165 Query: 181 KGS-VTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + TV+DS G AHDMS+Y+ KTG+N+W+V + + A ++ FN +G Sbjct: 166 VTNAGTVYDSLGVAHDMSLYYTKTGENDWEVRAALDGEM-ADGGAAQSISFNESGVPDVD 224 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + NG+ L Q A + Q+G G V +I ++G V Sbjct: 225 TALSFNFGDLGNGSADFDNIEVDLAGTTQYGEAFELREFAQDGNASGTFVGVEITENGEV 284 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 + NYSN ++ +G + +ANF N EGL +GDN+W+ATQ SG ALLG AGTG G+L +G Sbjct: 285 LANYSNGNSEAVGTVGMANFRNPEGLEPQGDNLWAATQESGAALLGQAGTGQLGSLESGT 344 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LEASNVDL++ELV+MI+AQRN+Q+N I+TQ IL T+ NLR Sbjct: 345 LEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVTNLR 387 >UniRef50_Q1I728 Flagellar hook protein FlgE n=8 Tax=Pseudomonas RepID=Q1I728_PSEE4 Length = 463 Score = 280 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 150/465 (32%), Positives = 227/465 (48%), Gaps = 67/465 (14%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA LDV GNNIAN T GFKS A FAD++AG+ +VG GV Sbjct: 1 MSFNIGLSGLYAANKQLDVTGNNIANVNTNGFKSSRAEFADVYAGANRLGVGKNQVGNGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 ++A ++Q F G NTG LD+ I GFF L D NGS+ YSR G F+ +++ +V Sbjct: 61 RLANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSD-NGSLSYSRAGAFQTNKDNFVVTSD 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---------- 162 GL+L GY A Q T++ I + +A K+TT INLNSS Sbjct: 120 GLRLQGYAADANGKI--QKGVLTDLKIDTSALAPKSTTLIDQGINLNSSALDIPLQVWDA 177 Query: 163 -----PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS- 216 + PF ++ +Y+ V+DSQGN H M ++ KTG N W +YT Sbjct: 178 TATPPAMVPNKPFDPTDRTTYSDSFPTKVYDSQGNEHVMEQFYRKTGTNEWTMYTLVDGR 237 Query: 217 --------DPNSIAKTATTLEFNANGTLVDGAMANNIATG-------------------- 248 P T+ FN +G++ + + A Sbjct: 238 NPFTPGAAAPAGTTPLTGTINFNPDGSVKNMSTAATGVPTTPAGQFEWSVTNNIFSMKGW 297 Query: 249 ------------AINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 + A +NS A ++ +Q+GY G L + I+ Sbjct: 298 VPAAKDAAGNWASNGAVGNADGMRLSMNSTTSYNTATARMSQSQDGYATGILSNLSIDST 357 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G + ++SN+Q++ +GQ+ +A+FAN +GL G W + +SG+ + TG G++ Sbjct: 358 GVMFASFSNQQSRAIGQVAIASFANPQGLQQIGGTRWKESFASGIPGIDAPKTGTLGSVE 417 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + +LEASNV+L++ELV +I AQ NYQ+NA+TI T+ I+ T++ + Sbjct: 418 SNSLEASNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQM 462 >UniRef50_Q9X5Y0 Flagellar hook protein flgE n=2 Tax=Rhizobiaceae RepID=FLGE_RHIME Length = 406 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 132/418 (31%), Positives = 193/418 (46%), Gaps = 29/418 (6%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GV 52 M+ VSG+NA + L + NIAN+ T G+K + F+ M S G GV Sbjct: 1 MSLYGTMRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSGGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + G TT T D+AI GFF + +NG + +R G F D NLVN Sbjct: 61 QTEVRYSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNAS 120 Query: 113 GLQLTGY---PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G L GY + T +++ + + A +T SM NL S P+ V+ Sbjct: 121 GFTLMGYEYEAGVDPTVVVNGFDGLTRVNLASDGLIAAGSTKGSMGANLPSGAPVGDVST 180 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLE 229 S+ V+DSQGN + + KTG N W + D + +++ TL Sbjct: 181 ------------TSLVVYDSQGNTRILDFNYEKTGANAWTLEIVDRASGDALTVPPVTLA 228 Query: 230 FNANGTLVDGAMANN-----IATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 FNA G L I GA + ++ F Q A N + +G Sbjct: 229 FNAAGELTTSPATVVANGALIVPPPATGAVVGSITIDFS-KTTQLGYAFNADGGSIDGNA 287 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 P + YQI+ DG V Y N + +I LAN + + L E NV+S SGV + Sbjct: 288 PSKVAGYQIDSDGIVYVKYENGKLDPRYRIALANVQSPDKLRPESGNVYSQGVDSGVIIT 347 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G AG+G+FG + +GALE+SNVD+++EL MI +QRNY +N++ +T ++L LVNL+ Sbjct: 348 GFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYTANSKVFQTGSELLEVLVNLK 405 >UniRef50_Q15R85 Flagellar basal body FlaE n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R85_PSEA6 Length = 458 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 135/458 (29%), Positives = 217/458 (47%), Gaps = 56/458 (12%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SG++AA +LD NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + Q F+ G+ T LD+A++ NGFF + + ++R G FKLD +VN Sbjct: 61 TQEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNS 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPTN-ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L G+P + + T + IP++ + + T+ S+++NL + D + F Sbjct: 121 NGDNLLGFPVNPDGTSSSVALSTTQAVRIPDSSGSPQPTSEVSLKMNLPAGDDAVDLDLF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT--GDNNWQVYTQDS------------- 215 + + +YN SVTVFDS G++H M+ YF+K N W V T Sbjct: 181 NPDDPLTYNAATSVTVFDSLGDSHVMTYYFMKDQAATNEWVVTTYMDDIALNTEGDTPGV 240 Query: 216 ---------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE------------ 254 + + F+A G A A+ ++ + Sbjct: 241 PPITGPNVVGETTGSPVAGYRMTFSAGGDFTSIANADGTSSATGDITSVALGGTILANGS 300 Query: 255 ------PATFSLSFLNSM----QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 F+ N+ Q A + + Q+G G L I DG V YS Sbjct: 301 DPSQTITTNFAFDPGNATPDEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATYS 360 Query: 305 NEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASN 364 N ++ + ++ L FAN++GL + + W + SG AL G A TG FG + + ALE +N Sbjct: 361 NGTSEPIIRVALVRFANDQGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQAN 420 Query: 365 VDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 V+L+ EL+++I+AQRN+Q+N++ ++ +Q+ T++N+R Sbjct: 421 VNLTTELIDLIIAQRNFQANSRALEVNNQLNQTILNIR 458 >UniRef50_A6W8K5 Putative uncharacterized protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8K5_KINRD Length = 462 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 140/460 (30%), Positives = 207/460 (45%), Gaps = 61/460 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL + T +DV+GNNIAN T GFKS + FAD + Sbjct: 4 SMFSGVSGLRSHQTMMDVVGNNIANVNTAGFKSSSVVFADTLSQLTKAAGAPTDAAAGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++VGLGV+V ITQ+ T G+ TG+ D+ + +G F + +G FYSRNG F LD Sbjct: 64 PAQVGLGVRVNAITQNMTQGSAQATGKSTDLMLQGDGMFAIQQGDG-TFYSRNGSFTLDA 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 N ++V G + G+ A G + +T+M A TT A + N++ + Sbjct: 123 NGSVVTNDGGYVMGWKADAAGAVNTNGQIGKLVIPSDTVMPAVATTEAKFKGNIDRTFKT 182 Query: 165 PTVTPFSASNADSYNK----------KGSVTVFDSQGNAHDMSVYFVKT----------- 203 PT P + + S + +D QG A + V F Sbjct: 183 PTALPAADQYVTGSSPGDGVIKGTAVTSSFSSYDDQGIATKVFVTFTNDVNYTAATAAST 242 Query: 204 ---------------GDNNWQVYTQDSSDPNSI-----AKTATTLEFNANGTLVDGAMAN 243 N W V DS+ + TA T+EF+ +G Sbjct: 243 DANGVVTPAKAAVYEPTNVWHVKAVDSNGKEVVLKKADGTTAETVEFDPDGAAKGTNSMV 302 Query: 244 NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ-NGYKPGDLVSYQINDDGTVVGN 302 GA A+ +T SL +G G L + DG + GN Sbjct: 303 ATVEGAGTKAD-STVSLDLTGLTSYVGTTGTSNVNPVADGAPIGTLTGFSFGTDGVITGN 361 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 YSN Q LGQI +A+F N+ GL EG++++S + +SG + G AG+ G++ G+LE Sbjct: 362 YSNGYKQTLGQIAIASFNNSAGLRKEGNSLYSVSTNSGQPVFGIAGSAGRGSILAGSLEM 421 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS E N+I+AQR +Q+N++ I + D++L LVNL+ Sbjct: 422 SNVDLSAEFTNLILAQRGFQANSKVITSSDELLQDLVNLK 461 >UniRef50_B1K372 Flagellar basal body FlaE domain protein n=54 Tax=Burkholderia RepID=B1K372_BURCC Length = 414 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 167/421 (39%), Positives = 235/421 (55%), Gaps = 26/421 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M + Q +SGL A++NLDVIGNNIAN+ T GFK G A+FADM+A S ++G+G + Sbjct: 1 MGYQQGLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 +A + Q+F GT +T LDVAI+ NGFF++ SNG YSR+G F D+N +V+ QG Sbjct: 61 LASVQQNFGQGTINSTKSSLDVAINGNGFFQMS-SNGVTTYSRDGTFHRDKNGAIVDAQG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY A + A + P + +A + T+ + Q NLN+ D +P TPF+A+ Sbjct: 120 RNLMGYAAGAGG--VINTAQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNAT 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + +YN S+ V+D+ G + +++YF K WQ Y + T+ F+A+ Sbjct: 178 DNTTYNYNSSIQVYDTLGGSQQVTMYFAKNAAGTWQAY---AGVQGQTPTNLGTVTFDAS 234 Query: 234 GTLVDGAMANNIATGA------------INGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 G L A GA P +L L Q G + + Q+ Sbjct: 235 GRLSSTTSAATGQPTPSLGQFAFSIPNTTGGANPQNLTLD-LGGTTQYGGKDGVNNLAQD 293 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G+ G L ++ I DG + GNYSN Q+ +LG I LANF N GL + G N ++ T +SGV Sbjct: 294 GFASGTLTTFSIGTDGKLTGNYSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGV 353 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + G+ N GTL ALE SNV+L+ ELVN+I AQRNYQ+NAQTIKTQ + TL+NL Sbjct: 354 PQISAPGSTNHGTLQGSALENSNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLNL 413 Query: 402 R 402 R Sbjct: 414 R 414 >UniRef50_C6XF46 Flagellar hook protein FlgE n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF46_LIBAP Length = 421 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 100/416 (24%), Positives = 178/416 (42%), Gaps = 16/416 (3%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGI 57 + A+SG++A + + + +NIAN T G+K +F+ + + S V G++++ Sbjct: 6 SMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSGGLEISTK 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 G+ +T D+AI GFF + + +R G F ++ L N+ G L Sbjct: 66 DMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVLL 125 Query: 118 GYPATGT--PPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP--LPTVTPFSAS 173 GYP P + I++ + ++A TTT + NL+ + P TP Sbjct: 126 GYPLKNASAPLIVNSFQGLERINVKHAELSAMPTTTGFISNNLDKNATIITPDKTPKHNG 185 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-------TQDSSDPNSIAKTAT 226 Y K S +D+ G++ VY+ KTGD W+V T +S N Sbjct: 186 RDAEYTHKSSFAAYDTLGSSVVYDVYYTKTGDKKWEVSIFRQDQSTNNSFPYNVAPLNTV 245 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 + F+ + + I+ ++ Q G + NG+ PG Sbjct: 246 EVSFDPVTGYLANSSHKAISFNDNTSGIDQQITIDIS-KTTQLAGGFIPQKSEINGHAPG 304 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 + ++ DG V Y + + ++ +A + + L N + T+ SG +G Sbjct: 305 KPKDFSVSKDGYVDIIYDDGTRVPIYRLAIATVPSEDNLKLFDGNTYLPTRDSGDISIGF 364 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G + +GALE +NVD++ EL +I AQRNY N++ +T ++ L++L+ Sbjct: 365 PGHNQHGEIFSGALETANVDIASELTELIEAQRNYAVNSKVFQTGSDFMDILISLK 420 >UniRef50_A6X6N9 Flagellar basal body FlaE domain protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X6N9_OCHA4 Length = 426 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 110/410 (26%), Positives = 185/410 (45%), Gaps = 22/410 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF---AGSKVGLGVK 53 M+ VSG+NA A L + +NIAN++T G+K F+ + G + G Sbjct: 30 MSLYGMMRTGVSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQYNSGSV 89 Query: 54 VAGI-TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + + G +T D+AI NG+F + ++GS F +R G F D+N NLVN Sbjct: 90 LTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGADGSTFLTRAGSFVPDKNGNLVNSA 149 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L G + I++ + + + +T+ + +NL S+D +P Sbjct: 150 GYYLLGAGPNDPAGALTMAG-LNIINVNSAALPPEASTSGNFTVNLPSTDQIPA------ 202 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 A +N K S+ ++ +G + VYF KTG + W V ++++D + T Sbjct: 203 --AGEFNHKTSLISYNDKGEKITLDVYFTKTGADEWSVTVKNAADDAVVGGPTTLTFDPT 260 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 G + L + Q G I NG P + Sbjct: 261 TGDMTSAGGVAVDLGPYGGQNLNLN-----LGASTQRAGDYTISQAQINGQAPSAVKGVD 315 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 + +DG+VV Y N ++L +I LAN A+ + + NV+ + SG LG + Sbjct: 316 VANDGSVVAIYENGTQKVLARIPLANVASPDRMTVVSGNVFLPSADSGDVRLGFPQSDGM 375 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SN D+++EL +MI AQR+Y +N++ +T ++++ LVNL+ Sbjct: 376 GKVMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLK 425 >UniRef50_Q3J1S9 Flagellar hook protein FlgE n=5 Tax=Rhodobacter sphaeroides RepID=Q3J1S9_RHOS4 Length = 423 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 123/423 (29%), Positives = 201/423 (47%), Gaps = 22/423 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+ + A+SGL+AA ++ +NIAN T GF+ A FAD+F + + VG GV+ Sbjct: 1 MSINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG------SVFYSRNGQFKLDENRN 107 F+ G+ TG LD+AI GFF + G Y+R G F L+ Sbjct: 61 TLRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGV 120 Query: 108 LVNMQGLQLTGYPATGTP---PTIQQGANPTNI-----SIPNTLMAAKTTTTASMQINLN 159 +N G +L +P + + A P I S T A + + L Sbjct: 121 AINASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLG 180 Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN 219 + +P F ++ +Y +V +FD++GNA + + YF+KT + D + Sbjct: 181 TQAAVPPAAAFDPADPTTYAAVTAVPIFDAKGNAVEAAAYFIKTANPTAGNPQTDWAVRL 240 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 +A T GA++ + A ++++L L Q + + + Sbjct: 241 VVAGEPLTPAQGDLTFDATGALSGGTGALSFTAASGSSYTLD-LTETQLADRSFEVNTVS 299 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 Q+G L S +++ GTV Y +GQ+VL FAN + L G + ++AT S Sbjct: 300 QDGKSASALTSLEVDASGTVWAAYGAGSPVAMGQVVLVTFANPQALRQLGASGFAATADS 359 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G + GTAG FG + GALE +NVDL++ELV++I AQRNYQ++A+ ++T + ++ T++ Sbjct: 360 GQPVAGTAGDSGFGIIRAGALEHANVDLTEELVHLITAQRNYQASAKAMETSNSLMQTIM 419 Query: 400 NLR 402 N+R Sbjct: 420 NIR 422 >UniRef50_A8GYL4 Flagellar basal body FlaE domain protein n=13 Tax=Gammaproteobacteria RepID=A8GYL4_SHEPA Length = 402 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 148/404 (36%), Positives = 224/404 (55%), Gaps = 8/404 (1%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M+F+ A+SGL A +L+ I NNIANS+T GF+SG + F+ ++ G + G GV V +Q+ Sbjct: 1 MSFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIYNGGQAG-GVNVMSTSQN 59 Query: 61 FTD-GTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F+ G+ T TGR LD+ I GFF L +GS Y+R G F D + + + G +L GY Sbjct: 60 FSMGGSLTYTGRQLDMGIQGEGFFVLSGQDGSTSYARAGMFNQDADGYITDPAGNRLQGY 119 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--PTVTPFSASNADS 177 T Q N T++ + +AA+ T+T + NL++ + P +PF +A + Sbjct: 120 SIGATGNL--QNGNVTDLQVQTGALAAQATSTIGLTSNLDARVEVIDPATSPFDPDDAST 177 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 Y+ ++ FDS GN H ++ Y+VKT DN W V+ + TLEF++NG L Sbjct: 178 YHSSSTIAAFDSLGNEHALTQYYVKTADNKWSVHYNMDGTDVT-PVGGHTLEFDSNGMLT 236 Query: 238 DGAMANNIATGAINGAEPATFSLSFL-NSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 G T A + L+ + Q N + QNGY G+L +I+D+ Sbjct: 237 TGNDITLNITDAAIIGGASNMELALSFDKSTQYAADYNNSSLNQNGYTSGELNGIRIDDN 296 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G + G Y+N Q Q+ GQ+VLA+F+N GL +N W+A+ ++G ++GT TG G L+ Sbjct: 297 GMLYGTYTNGQEQIQGQVVLADFSNPNGLVPTSNNAWTASNAAGQPIIGTPTTGTLGGLS 356 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 G LE SNVD + E+VN++ AQRNYQSNA+ + T + L+N Sbjct: 357 AGYLEGSNVDQTAEMVNLMTAQRNYQSNAKVLDTNSTMQQALLN 400 >UniRef50_Q7NU18 Flagellar hook protein flgE n=1 Tax=Chromobacterium violaceum RepID=Q7NU18_CHRVO Length = 416 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 163/418 (38%), Positives = 227/418 (54%), Gaps = 19/418 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SG+NAA+ LD IGNN+AN+ T GFKS F D++A S G GV Sbjct: 1 MGFQQGLSGINAASVQLDSIGNNVANANTVGFKSSRTEFGDLYAQSIFGTAANSPGNGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V +T + + G T NTGR LD+AI+ NGFF + NG+ YSR+GQF+++ LVN G Sbjct: 61 VLAVTANMSAGNTENTGRSLDLAINNNGFFIMNQPNGTQTYSRDGQFQVNSQGYLVNSYG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY + Q N+ I NT ++ + T+ S + LNS+ +P +P + + Sbjct: 121 AYLQGYGVNTSGQ--PQVGPLQNLQITNTTISPQATSQISWPVQLNSNATVPVNSPVNPT 178 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYF----VKTGDNNWQVYTQDSSDPNSIAKTA---- 225 + +YN V+DS GN+H +++Y+ N W V P +I Sbjct: 179 DPTTYNWPSPTVVYDSLGNSHQVTLYYSLASTSATGNTWTVTPYVDGAPATIPGGGSGNT 238 Query: 226 -TTLEFNANGTLVDGAMAN-NIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 +++FN NG+L + AN N+ NG+ L Q TQNG Sbjct: 239 NFSVKFNNNGSLANTTPANVNLTFNTTNGSSTPQTVAINLTGSNQIAQNYGTGTITQNGS 298 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 PG L I +G V +SN QT+ LGQ+ LA F N +GL + G N W + +SG A Sbjct: 299 APGLLTGVSIASNGVVQATFSNSQTKTLGQVALATFVNPQGLLNLGGNQWQQSGNSGPAT 358 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + GTGN GTLT G++E SNV+L+ ELVNMI AQR YQ+NAQTIKTQD ++ TL+N+ Sbjct: 359 VNQPGTGNAGTLTAGSVEDSNVNLTNELVNMITAQRYYQANAQTIKTQDTLIQTLLNI 416 >UniRef50_Q8K9K6 Flagellar hook protein flgE n=4 Tax=Buchnera aphidicola RepID=FLGE_BUCAP Length = 409 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 144/411 (35%), Positives = 236/411 (57%), Gaps = 11/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADM-----FAGSKVGLGVKVA 55 M+ + ++GL +D++ NNIAN++T GFKS T SF D+ ++ + GV ++ Sbjct: 1 MSIIETINGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGIS 60 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQ 115 + Q+F+DG T R LD+ I Q+GFFR++DS G V+Y+RNG F LD+N+N+VN QG+ Sbjct: 61 NLVQNFSDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMY 120 Query: 116 LTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 LTG + +N I+ + L++AK T+ ++ +L + + Sbjct: 121 LTGQNQFDLKNNLNSISNLEPINLRKSDLLSAKATSQIKLKADLINDFSSTNSITGKNDD 180 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD---PNSIAKTATTLEFN 231 + ++ +T++D N H +++ F + D+ W++ Q + + N I L+F+ Sbjct: 181 ISN-SEIHDITIYDKNENPHKLNISFNQIDDHQWKLNIQLNDEKIPDNEIINDNFILKFD 239 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 + G L+ + + + N +L+ ++++ + +QNGY G L + Sbjct: 240 SEGNLISNSSLQIKSKNSKNIILDP-ITLNLECFLEKSETNMPSIELSQNGYTKGFLKHF 298 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 +I ++G ++G Y+NE+ Q +GQI LA F N E L E ++WSAT SG +G AG Sbjct: 299 EILNNGEIIGQYTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQG 358 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 FG+L LE+SNVDL+KEL+NMI+AQRNYQS+AQ KT+D+I+NTLVNL+ Sbjct: 359 FGSLYTKFLESSNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVNLK 409 >UniRef50_B8KBZ1 Flagellar hook protein n=6 Tax=Vibrionaceae RepID=B8KBZ1_VIBPA Length = 438 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 125/437 (28%), Positives = 213/437 (48%), Gaps = 39/437 (8%) Query: 4 SQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVKVAG 56 A+SG++AA +L+ NNIAN+ T+GFK A F D+++ S G GV+ Sbjct: 3 YVALSGISAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAQK 62 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + Q F +G++ T +D+ IS GFF + + + +RNG F L+++ +V Sbjct: 63 VAQQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTAND 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L GY G + P+ I+IP K T+ + +NL + L F S Sbjct: 123 EYLLGYQVNGDTGDV-LSYEPSPINIPKEFGKPKQTSNIEVGVNLPAGGDLKDPALFDYS 181 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVYTQD-------------SSDP 218 + ++YN+ S T++DS G ++ ++ Y++K T N WQ Y Sbjct: 182 DPETYNRSTSSTIYDSMGQSYKLTTYYLKDQTQANTWQTYYTVTDSAGEKPVNILGGDAT 241 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM------------ 266 T++FN +GTL NNI +G + G P + LN Sbjct: 242 TPTGHVGHTMKFNNDGTLASLNSGNNIVSGPLGGTGPDDPNAINLNGADVSQTLSFGLDS 301 Query: 267 -QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 Q + ++G G L +++G+V+G YSN + LG++ + AN +GL Sbjct: 302 ATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVLGTYSNGENITLGRVAMVRVANEQGL 361 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 +G W +TQ SG + G + G+FG++ +G LE SN+D+++ELV++I AQRN+Q+N+ Sbjct: 362 DKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQSNIDMTQELVDLITAQRNFQANS 421 Query: 386 QTIKTQDQILNTLVNLR 402 ++++ +Q ++ +R Sbjct: 422 RSLEVHNQTQQNILQIR 438 >UniRef50_A6CQ97 Flagellar hook protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQ97_9BACI Length = 396 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 125/418 (29%), Positives = 189/418 (45%), Gaps = 41/418 (9%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------------- 46 +SG+ T LDVIGNNIAN TYGFK G +F D + Sbjct: 1 MYSGISGMKNFQTKLDVIGNNIANVNTYGFKKGRVTFKDTMNQTISGASAAQEARGGRNP 60 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN 105 +VGLG ++ I T + +TGR LD+AI+ +G+F + + FYSR G F LD+N Sbjct: 61 MQVGLGSTLSTIDTIHTQSSLQSTGRPLDLAINGDGYFVVKQGDAQ-FYSRAGNFYLDDN 119 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPL 164 LVN G+++ Y + +I + N + AK T + SM NL+ Sbjct: 120 GTLVNGDGMKVQSY----------ENGVLQDIKVNVNAQLPAKITESISMFGNLS----- 164 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 A + + ++ +V D + DM + T W + + + + Sbjct: 165 -----NDAVGNEPFVQQINVVTNDGKQITLDMKLTPQGTPSTKWGMEFINQNGDTPLNSA 219 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 A L+F ++ NG +++ + N G + A +G Sbjct: 220 AYVLDFGNPVDPAANPPNVDLPYTDSNGI-TQNLNVTMDYTQLTNLGGDLSAAADPDGNT 278 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 G L S+ I G + G YSN + +G + LA F+N GL G N + + +SG + Sbjct: 279 AGSLESFNIGSMGEINGVYSNGEITTIGYLALAKFSNPSGLTKAGGNSFQQSVNSGTPNV 338 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 AG GT+ +G+LE SNVDLS+E MI AQR +Q+N + I T D+IL LVNL+ Sbjct: 339 NVAGE-GRGTIVSGSLEMSNVDLSEEFTEMISAQRGFQANTRIITTSDEILQELVNLK 395 >UniRef50_Q48GC0 Flagellar hook protein FlgE n=10 Tax=Pseudomonas RepID=Q48GC0_PSE14 Length = 441 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 158/443 (35%), Positives = 224/443 (50%), Gaps = 45/443 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA +LDV GNNIAN AT GFKS A FAD +A S VG GV Sbjct: 1 MSFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGV 60 Query: 53 KVAGITQDFTDGTTTN-TGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 A ++Q F+ G T T LD+AI+ NGFF L + NG Y+R G F D+ +VN Sbjct: 61 TTAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSN-NGEKLYTRAGAFHTDKEGYVVNS 119 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G++L GY + +++ + ++ + K TT + NLNS+ LP++T F Sbjct: 120 GGMKLQGYNVDANGSVV--TGALSDLRVDSSNLQPKATTAITNVANLNSTTALPSLTTFD 177 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS----DPNSIAKTATT 227 A++ SYN K S +D+QGNAH + YFVKTG N W +Y+ DP + Sbjct: 178 ATDTKSYNMKYSTPTYDTQGNAHTLDQYFVKTGTNTWSMYSLMDGRSISDPTTTTADKND 237 Query: 228 LEFNANGTLVDGAMANN-----------------------------IATGAINGAEPATF 258 L F+++G LV A T Sbjct: 238 LTFDSSGNLVVAAPGTVPTDSANIKFNTDGTFTVANWVPGVQSGTGTTTSWGANGATGAS 297 Query: 259 SLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 + + Q + ++ Q+GY G L + ++ G + Y+N ++Q++GQ L N Sbjct: 298 IKLNMAGITQTASVSGLITQDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTN 357 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 FAN +GLA G W T +SGV + GT +G G +T ALE SNVDL+ ELVN+I AQ Sbjct: 358 FANVQGLAQAGGTNWRETFASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQ 417 Query: 379 RNYQSNAQTIKTQDQILNTLVNL 401 NYQ+NA+TI TQ I+ T + + Sbjct: 418 SNYQANAKTISTQSTIMQTTIQM 440 >UniRef50_C6NYI1 Flagellar hook protein flgE n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYI1_9GAMM Length = 416 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 161/419 (38%), Positives = 241/419 (57%), Gaps = 21/419 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------SKVGLG 51 M ++ A+SGL+AA T+L+ IGNNIAN T GFK A F D++A + G+G Sbjct: 1 MGYNTAISGLDAAQTDLNTIGNNIANVNTVGFKESNAQFGDLYAASLAGSAGASTTPGIG 60 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM 111 V ++Q+FT G TG LD+AI+ GFF + ++NG++ Y+RNGQF + N L N Sbjct: 61 VSTVDLSQNFTQGNIQTTGNPLDMAINGPGFFIV-NNNGTMDYTRNGQFHVSSNGVLENN 119 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 L + G+ + +N++I + M + T+ A++ NLN++D P+VTPFS Sbjct: 120 GDLPVQGFQP-VPGSNGRFSTILSNLTISESAMPPQATSQAALVANLNANDVPPSVTPFS 178 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-------DNNWQVYTQ--DSSDPNSIA 222 ASN +SYN + V+DS GNA D+++YFV+ N W VY +SS Sbjct: 179 ASNPNSYNDSTTFQVYDSLGNAQDITLYFVQASGTGSANQPNQWDVYYSAGNSSGTTVAT 238 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 + TTL+F+ G LV G A+ +G +G+ +T S++ S N + + NG Sbjct: 239 GSLTTLQFSNTGQLVSGGTASFTVSGWGDGSASSTISVNLSGSTLTN-SPFAVTSENVNG 297 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 Y PG S + G + NY+N Q + +G++ LANFAN +GLA N+WSAT ++G Sbjct: 298 YAPGTYSSISVQSTGEIDANYTNGQKKAIGKVALANFANLQGLAPISGNLWSATATAGNP 357 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 L+ + GT G + +GA+E+SNV LS +LV+MIVAQ+ YQ+N TIKT+ Q +L+ L Sbjct: 358 LVNSPGTAGLGVIQSGAVESSNVSLSSQLVDMIVAQQAYQANTSTIKTEQQDTQSLLQL 416 >UniRef50_B8FTP1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FTP1_DESHD Length = 426 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 26/424 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL +DV+GNNIAN T GFK +F+ M + + Sbjct: 4 SLYSAISGLKNHQIKMDVVGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG V+ I Q T G++ NTG+ D I+ GFF ++ G + Y R G F D+ Sbjct: 64 PAQVGLGSMVSSIDQIMTTGSSQNTGKSTDAMINGRGFFVFRNA-GQIVYGRAGAFSQDQ 122 Query: 105 NRNLVNM-QGLQLTG--YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS 161 N L + G + G + A A T + + + Sbjct: 123 NGYLTDPGTGAFVLGQMWGANDREILEWGSAPLTPLRFNIGSYPPEPEGGIIKINLGDFV 182 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 + + + DS + + D + + Sbjct: 183 QNGSNYEYVNPALIGASATVPDGGTLDSTTGKITFTKDPADEASGDPPAIEITDIDYDKL 242 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 A F G++ + + + + + + ++ + + + Sbjct: 243 TIPAGD--FVQKGSVYVYENPDLVGADLEDITDGSFDPKTGTITLNAAPPSAGVEIEGVD 300 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQ---TQLLGQIVLANFANNEGLASEGDNVWSATQS 338 G L I+ +G + G YSN + ++ +GQ+ +ANFAN+ GL + G+N ++AT + Sbjct: 301 GRLRAKLDEVTIDGNGIISGIYSNGKGSASRRIGQLAIANFANDAGLQNVGNNFYAATNN 360 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG+A +G AGT G + ++E SNVDLS+E +MIV QR +Q+N++ I D +L L Sbjct: 361 SGIADIGAAGTAGRGNIIPNSVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQEL 420 Query: 399 VNLR 402 ++L+ Sbjct: 421 IDLK 424 >UniRef50_Q7WA94 Flagellar hook protein FlgE n=3 Tax=Bordetella RepID=Q7WA94_BORPA Length = 473 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 176/473 (37%), Positives = 232/473 (49%), Gaps = 71/473 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M F Q +SGLNAA+ NLDVIGNNIANS T GFKSG ASFAD++A S+VGLGVKV+ I Q Sbjct: 1 MGFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYASSRVGLGVKVSAINQR 60 Query: 61 FTDGTTTNTGRGLDVAISQ-NGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 FT G + TG D+AI GFFRL D +G VFYSRNG+F +D+N +VN QG +LTGY Sbjct: 61 FTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFRLTGY 120 Query: 120 ---------------PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD-- 162 P TN++ ++ T + L+ + Sbjct: 121 PAGGVGAQPVDLQLPQGNIAPQATSTAGLQTNLNANAKVIDPNDTPADDGAVELDGTTYR 180 Query: 163 ----------------------------------------------PLPTVTPFSASNAD 176 PL PF +N Sbjct: 181 FTNASGTFAWVAPAPLDGTYNGGDIVIAGGAVTGDLASQPGYQPYKPLVAGIPFDPTNPL 240 Query: 177 SYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 SY + TV+DS GN+H M YF K T Y D + TL F+ Sbjct: 241 SYTDQVPTTVYDSLGNSHQMIQYFAKRPAVGTESVYEVYYVLDGQPMQVNGGASQTLNFD 300 Query: 232 ANGTLVDGAMANNIAT--GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 G L++ + N A +++ + G++ QNGY G+ + Sbjct: 301 TAGNLLNQPPTAQVTFANPGGNAAPADPLAITVSYNGVTQYGSDFAPKVVQNGYSSGEFM 360 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 + DG++V Y+N +TQ +G +VLANF N +GL G+N W T SG A LG GT Sbjct: 361 GLSVGKDGSLVAKYTNGETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGT 420 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T+ ALEASNVD+S+ELVNMIVAQR YQ+NAQTIKTQD+++ L+N+R Sbjct: 421 NGLATIAGQALEASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNMR 473 >UniRef50_A4C6G9 Flagellar hook protein n=2 Tax=Alteromonadales RepID=A4C6G9_9GAMM Length = 492 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 137/492 (27%), Positives = 209/492 (42%), Gaps = 90/492 (18%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SGL AA +LDV NNIAN TYGFK A FAD+F+ S + G GV Sbjct: 1 MSFNIALSGLKAAQKDLDVTANNIANVNTYGFKESRAEFADVFSTSLFSNAKTQNGEGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNM 111 + Q F G+ T LD+AI+ NGFF DS + Y+R+G FKLD + LV Sbjct: 61 TQVVAQQFHQGSLLFTSNALDMAINGNGFFVTTDSPLSRDFTYTRSGAFKLDADNRLVTA 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPT-NISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L G P + T I IP++ + T M NL+S+ F Sbjct: 121 GGDFLQGLPVNEDGSVKSVSLSTTAPIQIPDSAGSPSATGAVDMSFNLDSNAKALDPYKF 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD------------------------- 205 + + +Y S ++DS GN+ S Y+VK D Sbjct: 181 NPLDTTTYTASTSTVIYDSLGNSRIASFYYVKVADPTTTNAAATVPGSGFDALPADPNDA 240 Query: 206 ---NNWQVYTQDSSDPN------------------------------SIAKTATTLEFNA 232 N+W +++ + D + T L+F++ Sbjct: 241 TNANSWVMFSTVTDDAGVQKKVDLGNDLLSGGAPDARTFSTGDPVGDPTSHTGMLLQFDS 300 Query: 233 NGTLVDGAMANN-----IATGAINGAEPATFSLSFLNSMQQNT----------------- 270 +G+ V + P T + + Sbjct: 301 SGSPVASTFPVPKTEPLGTPLNVTITPPPTAPYDGASVVTNGANPDQQFNINMSNLTQFS 360 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 A I A +Q+G G L I DG + YSN Q + ++ LA F N +GL G+ Sbjct: 361 SAFEITALSQDGQTVGRLTGISIGGDGLIEAKYSNGDAQAISKVALARFPNEQGLTQIGN 420 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 W+ ++ SG AL G +G FG++ +G LE +NV+L+ ELV++I AQRN+Q+N++ ++ Sbjct: 421 TSWTPSRESGEALAGEPDSGTFGSIRSGTLEQANVNLTGELVDLIAAQRNFQANSRALEV 480 Query: 391 QDQILNTLVNLR 402 +QI ++ +R Sbjct: 481 NNQISQNILQIR 492 >UniRef50_O52070 Flagellar hook protein flgE n=37 Tax=Rhizobiales RepID=FLGE_BRUAB Length = 396 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 114/410 (27%), Positives = 179/410 (43%), Gaps = 23/410 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG----LGV 52 M+ VSG+NA A L + +NIAN++T G+K F+ + S G V Sbjct: 1 MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 G +T D+AI NG+F + GS + +R G F D+N +LVN Sbjct: 61 LTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSA 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L G A + +++ + A+ +T +NL S+D P Sbjct: 121 GYYLLGAGADEAAGGLTVAG-LNVVNVNAAALPAEGSTAGDFTVNLPSTDQAPA------ 173 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 A YN K S+ ++ +G + VYF KTG + W V ++++D I T + Sbjct: 174 --AGGYNHKTSLISYNDKGEKITLDVYFTKTGADEWNVSVKNAADGVEIGTTVLNFD-PT 230 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 G LV G L Q G I NG P + Sbjct: 231 TGDLVSGGNVAVNLGAYGGQTLNLN-----LGGSTQRAGDYTISQAVINGQAPSSIKGVD 285 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 + +DG VV Y N ++L +I LAN A+ + + N++ + SG LG Sbjct: 286 VGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNIFLPSAESGDVRLGFPQGDGM 345 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +G LE SN D+++EL +MI AQR+Y +N++ +T ++++ LVNL+ Sbjct: 346 GKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVNLK 395 >UniRef50_Q1IR53 Flagellar basal body FlaE n=2 Tax=Acidobacteria RepID=Q1IR53_ACIBL Length = 409 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 144/419 (34%), Positives = 209/419 (49%), Gaps = 33/419 (7%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----------KVGLGV 52 FS +SGL A++T L I NN+AN T G+K A F D+F +VG G Sbjct: 4 FSIPLSGLTASSTALATIANNLANQNTIGYKQTRALFRDLFYQQIGQTGSGDPIQVGAGT 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + I +FTDG+ + TG DVAI +GFF + NG+ Y+R G FK+ + L Sbjct: 64 MIGTIDTNFTDGSVSPTGVPTDVAIMGDGFF-VAQQNGNDIYTRAGNFKVGADGTLRTQD 122 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G + GY A T G N+ + + TT+ + NLN+S + Sbjct: 123 GAVVLGYQAVDGKVTTGSGLGALNL-GQGQVSSPSATTSLQLTTNLNASAKVGD------ 175 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI--AKTATTLEF 230 + S+ V+DS G H ++ F KTG N W + ++ + TL F Sbjct: 176 ------SYNTSLKVYDSLGGVHVVTFTFTKTGTNTWDYDASLPTGEGTVSLPSGSHTLTF 229 Query: 231 NANGTLVDGAMANNIA-TGAINGAEPAT------FSLSFLNSMQQNTGANNIVATTQNGY 283 +++G L + N TG +GA + + +SM Q + AT Q+GY Sbjct: 230 DSDGKLTTPSSNINFDLTGLSDGASDMKGVTWKLYDATGGSSMTQMAADSATPATAQDGY 289 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G L ++ I DGT+ G +SN +T ++GQI +A+F N +GL G N + T +SG A Sbjct: 290 GSGMLQNFNIGADGTIEGTFSNGKTSIIGQIAIASFPNVQGLRKVGQNAYVGTLASGQAA 349 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LG G+G GTL GALE SNVD++ E N+IVAQR YQ+NA+ I T D+I +NL+ Sbjct: 350 LGAPGSGGRGTLGGGALELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTINLK 408 >UniRef50_A6F9Q0 Flagellar hook protein n=2 Tax=Gammaproteobacteria RepID=A6F9Q0_9GAMM Length = 437 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 142/442 (32%), Positives = 219/442 (49%), Gaps = 49/442 (11%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD 60 M++S +SGL + L+VI NIAN T GFKSG A F+ +++G G GV+VA I+ + Sbjct: 1 MSYSIGLSGLRSTNEQLNVISQNIANVNTSGFKSGRAEFSSVYSGGSAG-GVEVAAISSN 59 Query: 61 F-TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGY 119 F DG NTGR +D+AIS GFF ++++ G Y+R G F + + + G +L GY Sbjct: 60 FDRDGDVVNTGRSMDLAISGRGFF-VLNNGGETSYTRAGSFVRNASNYIETSSGARLQGY 118 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS-NADSY 178 P + +++ + + AK +++ NL + P + D Y Sbjct: 119 PVDANGALL--SGVISDLKVGTGTLPAKASSSVEFAANLKADAAAPATAFDPTNIQPDMY 176 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVK------------------------------------ 202 N S VFDS G H ++ YFVK Sbjct: 177 NYSQSGKVFDSLGREHVLTQYFVKQVPGPAVTAVAAKPAVIADPTATPKVIGSPEVKAVA 236 Query: 203 ----TGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATF 258 T +N W V+ T TL F+ +G + + ++ I GA+P + Sbjct: 237 ARGITVENEWDVHYFIDGQKAGTTAT-QTLNFDTSGNITSPTGSVELS-QTITGADPLSI 294 Query: 259 SLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLAN 318 +S N M QN + ++ NGY GDL + +I+DDG++ G Y+N Q +L G+++LAN Sbjct: 295 KISMTN-MSQNAASFSLSRNETNGYGAGDLKTIRIDDDGSLYGVYTNGQDKLQGKVILAN 353 Query: 319 FANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQ 378 FAN GL + W + +SG +G +G G+LT+GA E SNVDL+ ELV+++ AQ Sbjct: 354 FANPNGLRQGDNTTWGQSFASGAPTVGLPSSGTLGSLTSGAYEGSNVDLTGELVSLMTAQ 413 Query: 379 RNYQSNAQTIKTQDQILNTLVN 400 RNYQ+N++TI +++ L N Sbjct: 414 RNYQANSKTISAAEKMTQVLFN 435 >UniRef50_B6R7Z8 Flagellar hook protein FlgE n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7Z8_9RHOB Length = 397 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 191/419 (45%), Gaps = 39/419 (9%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-AGSKVGLG---V 52 M +VSG+NA + L + +NI+N+ T G+K +F+ + +G G V Sbjct: 1 MGLYGIMNTSVSGMNAQSNKLSTVADNISNANTVGYKRYKTAFSSLVGSGGTSGHESGIV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 + G T RG D+AI+ GFF++ DS GS +Y+R G F LD+N +VN Sbjct: 61 NTTVVQTVRQQGAFNFTSRGTDLAINGKGFFQVQDSQGSTYYTRAGDFVLDKNGQMVNSG 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G +L A +++ + ++ + +NL SS P+ T P Sbjct: 121 GYKLL-------------SAGGAPVTVDLNTPVWQASSEGELGVNLASSTPVRTGAPSYP 167 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN---------NWQVYTQDSSDPNSIAK 223 N ++ K SV+ +D GN + + + K G N W+V + P + Sbjct: 168 GN---FDYKTSVSAYDQNGNVVKIDLVYSKIGQNMTGSTVDDSTWKVQAYNQDTP-PVEL 223 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 L F+ +GTL G+ T L+ ++ +GY Sbjct: 224 ANVDLVFDGDGTLQTGSPDELAFTVPNGETLTLD-----LSKTVTAGDKFSVNKVDVDGY 278 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 P + + +I DG V G Y +LL QI + NF+N +GL ++ NV++AT +SG Sbjct: 279 GPSTIKTIRIEADGRVFGVYEGSAEKLLDQIQIVNFSNPDGLQAKSGNVYAATDASGDPA 338 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G G FG+L +GA+E SNVDL+ EL M+ AQR Y +N + ++L L NLR Sbjct: 339 VGFPGDNGFGSLYSGAVEGSNVDLAAELTEMVQAQRTYSANTKVFNASSELLQELNNLR 397 >UniRef50_A1UTT0 Flagellar hook protein FlgE n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTT0_BARBK Length = 404 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 119/413 (28%), Positives = 178/413 (43%), Gaps = 21/413 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----KVGLGV 52 M +VSG+NA L I N+AN+ T G+K F++ S V GV Sbjct: 1 MGIYGMMHTSVSGMNAQGKRLSGIAENVANAGTVGYKRTNVQFSNYVTPSGDYAYVPGGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 K G TGR D I+ NGFFR+ D NG+ F +R G F D++ L N Sbjct: 61 KSHVGHDISIYGPARATGRPGDAMINGNGFFRVEDENGNEFLTRAGSFSRDKDGYLRNSS 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L IQ PT++ + TT + N ++S Sbjct: 121 GHYLL----NDEGQRIQIRGGPTDL------FGPEVTTGIDFKANFDASAESLGEGVIDP 170 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 + SYN+K SVTV+DSQG + Y KT DN W V + A E N Sbjct: 171 EDPKSYNQKKSVTVYDSQGKKVQVDFYMRKTADNKWTVDAYHGDNKVGTADFNFDKEGNL 230 Query: 233 NGTLVDGA---MANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLV 289 L D N+ +S+ G + NG + G Sbjct: 231 QAPLPDFTLTLPENDGGDPPGTFQVAINLGGLGEDSLVTQKGNSYAFEAEANGMEVGSFD 290 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGT 349 + +G V Y+N++T+++ + LA + E L V+ +G ++G G Sbjct: 291 GFTFGKNGEVEVKYTNQKTRVISYVGLATVTSPESLTVLSGTVFQTNTRTGAQMVGRPGD 350 Query: 350 GNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G FG+LT G LE SNV++S+EL +MI +QRNY +N++ +T ++++ +VNL+ Sbjct: 351 GVFGSLTAGYLEDSNVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVNLK 403 >UniRef50_C6QF26 Flagellar basal body FlaE domain protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF26_9RHIZ Length = 417 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 121/420 (28%), Positives = 196/420 (46%), Gaps = 24/420 (5%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG----SKVGLGV 52 M ++SG+ + + + +NIAN T G+K +A FA + A S V V Sbjct: 1 MGLYGLMTTSISGMAVQSDRMGTVADNIANVNTTGYKEASAEFATLVAEGHVASYVPGSV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 G + T D+A+S NGFF + +G+ + +R G F + N LVN Sbjct: 61 STIARRAVTHQGDLSYTNSPTDLAVSGNGFFMVQSPSGTPYLTRAGSF-ISTNGELVNAA 119 Query: 113 GLQLTGYPA--TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L GY G+ I A + N + A +T+ + Q+NL S + T P Sbjct: 120 GFTLLGYDLLNGGSSSVINSAAGLVPVGTANLGLKATPSTSGNFQVNLPSDAAVSTSLPS 179 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 + + + K S+ +D+ G+ + +Y KTG N W+V D++ ++ + Sbjct: 180 ANAAGADFAGKTSIITYDNLGHKVTLDIYSAKTGPNQWEVSVYDNAGASAGGGFP----Y 235 Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNS---------MQQNTGANNIVATTQN 281 A L A+ + TG + PAT S++ N Q GA V + N Sbjct: 236 AAGSQLTTQALTFSGTTGKLTSPSPATLSVNVPNGATLNFNMGNTTQLAGAYIPVDASAN 295 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G P + +I+ G V Y++ +I LAN A+ + L + NV++ + SG Sbjct: 296 GNGPSAVDRLEISAQGIVTAVYADGSRVDAFKIPLANVASPDNLTAISGNVFATNKESGD 355 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LGTA +G+ G + +GALE S+VDL+ EL M+ AQR+Y +N++ +T ++L+ LVNL Sbjct: 356 LQLGTANSGSLGKIVSGALEKSSVDLASELTTMVEAQRSYTANSKVFQTGTELLDVLVNL 415 >UniRef50_Q2KCE1 Flagellar hook protein n=27 Tax=Alphaproteobacteria RepID=Q2KCE1_RHIEC Length = 434 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 128/428 (29%), Positives = 195/428 (45%), Gaps = 27/428 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GVKVAGI 57 + AVSG+NA A L + +NIAN T G+K+ + SF+ + S G GV+ + Sbjct: 6 SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGVQTSVR 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLT 117 G + T D+AIS +GFF + +G+ +R G F+ D+ NLVN G QL Sbjct: 66 QAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQLM 125 Query: 118 GYPATGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS---- 171 GY P + +++ + A +T+ + NL+S + V P + Sbjct: 126 GYSYDSGAPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSGANIAPVAPATLPSA 185 Query: 172 -ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----------DNNWQVYTQDSSDPNS 220 A+ + KK S+ +D GN YF KT + W+V ++D + Sbjct: 186 NAATTTADTKKFSMVAYDHLGNKVMYDFYFTKTSVVTPPPATGTASTWEVAVFRNADAAT 245 Query: 221 IAKTATTLEFNA-----NGTLVDGAMANNIATGAINGAEPAT-FSLSFLNSMQQNTGANN 274 T+ A +G L + GA+ A+ S++ S GA Sbjct: 246 GGTTSFPYTGGAGAVVASGNLTFDRNGKMLTGGALPIADTKNALSINMDLSGFTQLGAAF 305 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 T NG + I+ DG V Y + T+ L +I LAN A+ + L NV+S Sbjct: 306 AGTGTPNGQAASPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYS 365 Query: 335 ATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 A SGV + G T GT+ +GALE SNVDL+ EL MI AQR+Y +N++ +T I Sbjct: 366 ANGQSGVTVTGFPQTNGLGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDI 425 Query: 395 LNTLVNLR 402 ++ LVNL+ Sbjct: 426 MDVLVNLK 433 >UniRef50_C7LUH2 Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUH2_DESBD Length = 513 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 129/507 (25%), Positives = 213/507 (42%), Gaps = 106/507 (20%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + +G+ A N+ VI +NIAN +T GFKS F + + ++VG GV Sbjct: 6 SLYIGTTGIMAQQKNMAVISDNIANVSTVGFKSSHMIFNTLMSQQMGSASVSNQVGQGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-DSNGSVFYSRNGQFKLDENRNLVNMQ 112 V+ I D + G T D++IS GFF + + + Y+R G F+ D L + Q Sbjct: 66 VSSILYDMSLGALEPTNTATDISISGKGFFIVSPNGSSDQHYTRAGNFRFDAEGYLRDPQ 125 Query: 113 GLQLTGYPA-------TGTPPTIQQGANPTNISIP-----NTLMAAKTTTTASMQINLNS 160 G L GY T A T+I + + + TT M INL+S Sbjct: 126 GNILQGYRMPAESILDTAPVIPPAASAPITDIRLDMQDGGGPVSEPEATTEMRMMINLDS 185 Query: 161 SDPLPTVTPFSAS---------------NADSYNKKGSVTVFDSQGNAHDMSVYF----- 200 S + + S +A +Y+ + ++ ++DS G AH++ YF Sbjct: 186 SSQERSTSTTSPFTALFDSWDATQPEPLDAGAYSYQSAMKIYDSDGGAHEVRAYFDPVQD 245 Query: 201 ---VKTGDNNWQVYTQDSSDPNSIAKT-------ATTLEFNANGTLVDGAMANNIATG-- 248 V +G+ W+ ++ TL F A+G L++ + + Sbjct: 246 GASVPSGNRMWEFLVTIPPTQDASGLDTKKGVLMTGTLTFTASGELLNMSAFEGSSDDKN 305 Query: 249 ---------------AINGAEPATFSLSFLNSMQQNTG---------------------- 271 +N S + ++ N+G Sbjct: 306 SWVPVNLSEDGYPVLNVNLVGAEPISSALDMGLRSNSGWALPAGVNTLADLGTAISDLPS 365 Query: 272 ----------------ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIV 315 ++ + +QNGY+ G L S ++ G +VG +SN Q Q L +I Sbjct: 366 LQNADRQILSITNFNSGSSTLYQSQNGYERGFLQSVSVDTAGVLVGYFSNGQNQGLYKIP 425 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 +A+F N +GL EG N++SAT+ SG +G AG G G++ +LE SNVDL+ E VNMI Sbjct: 426 MADFINPQGLFREGGNLFSATKDSGAVSVGWAGEGRLGSVITSSLENSNVDLATEFVNMI 485 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 + Q+ + +N++ I T DQ++ T + ++ Sbjct: 486 ITQKGFDANSKVITTGDQVVQTAIQMK 512 >UniRef50_Q5ZW68 Flagellar hook protein FlgE n=5 Tax=Legionella RepID=Q5ZW68_LEGPH Length = 437 Score = 260 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 151/442 (34%), Positives = 224/442 (50%), Gaps = 45/442 (10%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M F+ A+SG+ A+ +L+VIGNNIANSAT GFK A FAD+++ S VG GVK Sbjct: 1 MVFNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGSNAVGGGVK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + Q F GT + + LD+A++ +GFF L D G+ Y+R GQFKL+ +VN Sbjct: 61 LSRVHQSFATGTLSTSNNTLDLAVNGSGFFILSD-QGAKIYTRAGQFKLNNENYIVNANN 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +LTG ++ I + + ++ S+ +NLNS P V + Sbjct: 120 QRLTGLLTDSNGAI---TGASGDLRINTANITPRASSNVSVGVNLNSQSKAPNVDWVGGA 176 Query: 174 NA--DSYNKKGSVTVFDSQGNAHDMSVYFVKTGD----------------NNWQVYTQDS 215 + D+YN S T++DS GN+H +S+YF+ N W V Q Sbjct: 177 SPATDTYNNVTSSTIYDSLGNSHVLSMYFIHADSTALAGSPNAASPAGTENQWYVAFQID 236 Query: 216 SDPNSIAKTATTLE------FNANGTLVDGAMANNIA---------TGAINGAEPATFSL 260 + A FN++G+ +N A NG+ P ++ Sbjct: 237 NQNVPPNVGAQNTNNLFRANFNSDGSFAGVFDTSNAALPNNLIPLSFNLNNGSSPLNLNI 296 Query: 261 SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 +S Q + + NGY G L I+D G + G Y+N Q+ +GQI LANFA Sbjct: 297 DLSDS-TQFGSPFAVQSAYNNGYTTGSLAGLDIDDSGMIYGRYTNGQSLAMGQIQLANFA 355 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 + E L + G+ W+ T +SG L+ G+G G + +G LE SNVDL+ ELV +I AQRN Sbjct: 356 DPESLQNIGNTSWAETTASGQPLISAPGSGGLGLINSGRLEESNVDLTGELVKLINAQRN 415 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 +Q+NAQTI+T D I T++N+R Sbjct: 416 FQANAQTIRTGDAITQTIINIR 437 >UniRef50_Q2RZC6 Flagellar biosynthesis cell-distal portion of basal-body rod n=2 Tax=Rhodothermaceae RepID=Q2RZC6_SALRD Length = 432 Score = 260 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 124/441 (28%), Positives = 198/441 (44%), Gaps = 54/441 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + S VSGL + T LD + NNIANS+T FK A+F++ Sbjct: 5 SLSIGVSGLRSHQTRLDTVSNNIANSSTTAFKRQRAAFSEELGQAILGVGRTAGGSNINP 64 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----SVFYSRNGQFK 101 SKVG GV VA I ++F+ G+ +TG D+A++ +GFF +G +R G F Sbjct: 65 SKVGRGVSVASIDRNFSQGSLNDTGIKTDLALNGDGFFVASPKSGAASDQRRLTRAGNFT 124 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNS 160 ++N LV GL + G+ N+ N AAK TT A + NL++ Sbjct: 125 FNQNGELVTANGLNVQGWEVGEDGTA--NTGELKNVQFDPNAQSAAKATTEAQVGGNLSA 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD------ 214 + S+ V+D QG AH++ + F T ++ W +D Sbjct: 183 DAEAGDTSEISS------------VVYDEQGKAHNVVINFENTSEDTWTFSVEDPDGVLQ 230 Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM-------- 266 ++ T+ F +G++ + N NG +++ Sbjct: 231 DANGGGPGDANGTITFKDDGSVDSISGMTNAYDPDGNGTNDGVSLDWTNDAVQGGKSLGI 290 Query: 267 -----QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 Q +G+ QNG G+L Q +G + NY+N + Q+ + + N Sbjct: 291 SLRDITQFSGSTTSKFQGQNGNSSGELSGVQFTPEGKLQLNYTNGVQEEEYQLAIGDVNN 350 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL +G+N ++ T +SG LG AG ++ +GALE+SNVDL+KE ++I AQR+Y Sbjct: 351 PNGLEQQGENFFTTTGASGDLQLGRAGRDLQTSVVSGALESSNVDLAKEFSDLIKAQRSY 410 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 Q+++Q I T D++LN V L+ Sbjct: 411 QASSQIITTADEVLNQTVQLK 431 >UniRef50_C4Z5G6 Flagellar hook protein FlgE n=2 Tax=Clostridiales RepID=C4Z5G6_EUBE2 Length = 464 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 124/438 (28%), Positives = 201/438 (45%), Gaps = 38/438 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVSGL A T +DVIGNNIAN T FKS + +F+++F + Sbjct: 27 SMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNAESGKGG 86 Query: 47 ----KVGLGVKVAGITQ-DFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFK 101 ++GLG V I+ T+G + T D+ I + FF + +S G+ F++R G FK Sbjct: 87 TNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIV-NSAGNTFFTRAGNFK 145 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASM---QINL 158 +DE+ LV G + G+ T ++ + ++ P + T+A IN Sbjct: 146 VDESGALVTSAGANVMGWQVDETGKAVKDVVSKLYVNSPEFAYTSPQRTSAVNFTGNINA 205 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 +S D + T F S +S+ ++ QG+ ++ V N ++ Sbjct: 206 SSKDTITTTLNFYDSLGNSFQATVNLDYAGVQGDNTQYTMTCVGVSKNGNPTDLTFTASG 265 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 T T L +N + + + T S + + +G+ + Sbjct: 266 PLSFNTLTGLADQSNANIQLTFSNDATLAQTNENIDIRTIGESETSPVLTLSGSGLTMYA 325 Query: 279 TQN-------------GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 + G G + S I++ G +V +YSN T+ +GQI +A F+N EGL Sbjct: 326 DKTSIKGNLGIDEVGKGKAVGKMTSVGIDNSGYIVASYSNGDTKNIGQIAVATFSNPEGL 385 Query: 326 ASEGDNVWSATQSSGVAL-LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 EG+N++SAT +SG +G T + G++++G LE SNVDLS E NMI QR YQ+N Sbjct: 386 QKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGVLEMSNVDLSSEFTNMITTQRGYQAN 445 Query: 385 AQTIKTQDQILNTLVNLR 402 ++ I D +L L+NL+ Sbjct: 446 SRIITVSDTLLEELINLK 463 >UniRef50_A6DYV2 Flagellar hook protein FlgE n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYV2_9RHOB Length = 419 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 132/426 (30%), Positives = 206/426 (48%), Gaps = 32/426 (7%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F A+SGLNAA T++ V NNIAN T GF A FAD++ S++G G + Sbjct: 1 MSFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSRPASQIGSGTE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV---DSNGSVFYSRNGQFKLDENRNLVN 110 V+ I DF G+ T TG LD+++ GFF++ D+ Y+R G F ++ + N Sbjct: 61 VSRIGVDFKQGSLTATGNVLDLSLQGPGFFQVRTGPDAGADAGYTRAGAFGMNREGFVTN 120 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP----- 165 G LT +P + T+ + IP + TT + NL+ S+ Sbjct: 121 AAGHFLTVFPTSENGDTLSTT-QTQRLQIPQQFGTPQATTAVDLSFNLSLSNNGGLGAQA 179 Query: 166 --TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------GDNNWQVYTQDSS 216 F ++ +Y + V D+ G A YFV + G + V Sbjct: 180 AIPAAAFDPADPTTYAATTQIPVLDAAGRAVPAQAYFVMSDAPDALDGGLAYTVQLVVDG 239 Query: 217 DPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 + TL F+A G G A N G + L + + G + Sbjct: 240 VITAPTDPLATLSFDAGGAQTGGLEAMNFDFGEQALSL-------SLGGSRVSEGPFGAI 292 Query: 277 ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 A +QNG + DL S + DGTV +Y E + +GQ+ +ANF++ +GL S G + A+ Sbjct: 293 AVSQNGTRQLDLSSVDVRQDGTVWASYGAETSVAVGQVAVANFSDIQGLGSIGSATYRAS 352 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 + SG LG GT FG + G++E SNVDL+++LVN+I+AQRNYQ++A+ ++T + + Sbjct: 353 RESGDVRLGVPGTSGFGAIRAGSVERSNVDLTEQLVNLIMAQRNYQASAKALETNGTLAD 412 Query: 397 TLVNLR 402 T++N+R Sbjct: 413 TVLNIR 418 >UniRef50_UPI00016C0DB8 hypothetical protein Epulo_06138 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0DB8 Length = 473 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 118/480 (24%), Positives = 186/480 (38%), Gaps = 90/480 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL + +DVIGNNIAN T GFKS +FAD++ + Sbjct: 4 SLFSGVSGLQSHQLKMDVIGNNIANVNTIGFKSQRVTFADVYYQTTQSATTANEMTGLGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 ++GLG V+ I T G+ T D+ I + F + D+ G +Y+R+G F++ Sbjct: 64 MNAMQIGLGTSVSSIDMLMTPGSAQRTDNPFDLMIEDDAMFIVSDATG-TYYTRSGAFRV 122 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQG--ANPTNISIPNTLMAAKTTTTASMQINLNS 160 DE LV G+++ G+PA I +G + + N +TTT ++ NLN Sbjct: 123 DERGTLVIPNGMRVQGWPANEIGTEIMRGTVGDLKLNTPENNSADPQTTTDVNITGNLNV 182 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----GDNNWQVYTQDSS 216 D + +A + ++ +D+ G + M + F T + Sbjct: 183 DDSI------NADGTTASPIYSAIKFYDTLGTQYSMPITFTATTLDAAQGQTVWTIGIPA 236 Query: 217 DPNSIAKTATTLEFNANGT-------LVDGAMANNIATGAINGAEPATFSLSFL------ 263 D + T + +G + A T + F Sbjct: 237 DTLTTPPNPFTTITDTDGNQYLITPPVPTPNPAVIKFDVDGEIVLDGTEEMQFTAINLRN 296 Query: 264 -----------------------------------------NSMQQNTGANNIVATTQNG 282 +S+ + G Sbjct: 297 AYVRDPDDPSIATLAPIIADVGTQGTGGGTIEVNLSLLTQYDSITNLDPNMGTLDFNGAG 356 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G++ + + DG + YSN +LLGQ+ + F N GL DNV+ +T +SG Sbjct: 357 KAAGEMQGFDVGTDGKITAYYSNGDIKLLGQVAVTYFDNLAGLEKVADNVFKSTANSGDF 416 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G G+ G LE SNVDLSKE MI QR YQ++++TI T D++L L+NL+ Sbjct: 417 D----GVGAAGSFATGTLEMSNVDLSKEFTEMITTQRGYQASSKTITTSDEMLQELINLK 472 >UniRef50_B8CYR1 Flagellar hook protein FlgE, epsilon proteobacterial n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYR1_HALOH Length = 519 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 133/516 (25%), Positives = 213/516 (41%), Gaps = 116/516 (22%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A T +DVIGNNIAN T G+KS + +F +M + + Sbjct: 4 SMYAGVSGLKAHQTRMDVIGNNIANVNTVGYKSSSVTFKEMLSQTLRGAKAPQGGRGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV V IT D T G TG D+AI NG+F + + ++R G+ LD+ Sbjct: 64 PMQVGLGVGVGSITVDHTQGNLQPTGVTTDLAIQGNGYFVVNNGQ-KNLFTRAGRLNLDD 122 Query: 105 NRNLVN-MQGLQLTGYPATGTPPTIQQGANPTN--ISIPNTLMAAKTTTTASMQINLNSS 161 N LVN G + G+ A + TI G +P N I+ ++M A+ T A++ NL+S Sbjct: 123 NGYLVNVSNGFVIQGWMADISTGTINSGQDPENIHITDEYSIMNARATGNATISGNLDSQ 182 Query: 162 D--------------------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV 201 L + + N +++++ F+ Sbjct: 183 FGGTREITVDVLDSLGEMHTVTLSFTKRVPELTTTIGGWDLNFRATEPDINLNNLTIDFL 242 Query: 202 KTGDNNWQVYTQDSSDPNSI--------------------------------------AK 223 D+ ++ ++ Sbjct: 243 ADDDSQINASYNSGTNTVTVAADWDNSSTNAPADLEAIENAINDALNANGLASVDITATT 302 Query: 224 TATTLEFNANGTLVDGAMANNI-------ATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 T +F+ G + +N T A A PA+ +++F N+G+N + Sbjct: 303 TGAMTDFDGAGAITLSNPPSNTWDWNLVDVTDANLPASPASGTITFNPDGTINSGSNGSI 362 Query: 277 ATTQ-NGYKPGDLVSY-----------------------------QINDDGTVVGNYSNE 306 A NG G ++ I+D G + G+YSN Sbjct: 363 AFDPTNGAATGQTINLDFSALTQLAEGFDFKINSDGYETGALEGFTIDDGGVITGSYSNG 422 Query: 307 QTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVD 366 + +GQI +A F N GL EG+ ++S +++SG +G AG+G G ++ G LE SNVD Sbjct: 423 LVRPIGQIAIAYFVNPSGLMKEGETLFSPSENSGDPQIGEAGSGGRGKISVGNLEMSNVD 482 Query: 367 LSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L+++ +MI QR +Q+N++ I T DQ+L LVNL+ Sbjct: 483 LAEQFTDMITTQRGFQANSKIITTTDQMLQDLVNLK 518 >UniRef50_B1M7H7 Flagellar basal body FlaE domain protein n=8 Tax=Alphaproteobacteria RepID=B1M7H7_METRJ Length = 407 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 125/417 (29%), Positives = 190/417 (45%), Gaps = 26/417 (6%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSKVGLGV 52 M VSG+NA + L + +NI N T G+K + F+ + GS V Sbjct: 1 MGLYGVLHAGVSGMNAQSNRLGTVADNIQNQNTTGYKRASTEFSSLLIDPSPGSYDAGSV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN-RNLVNM 111 + +GT T T D+ I NGFF + D +G + +R G F +D +LVN Sbjct: 61 DTVVRHRISEEGTGTATNSPTDLTIKGNGFFVVKDGSGRSYLTRAGNFVVDGQTGDLVNA 120 Query: 112 QGLQLTGYP-ATGTPPT-IQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G++L GY A G P + N+++ M +T +++ NL S P+ Sbjct: 121 AGMRLQGYSLANGEPSVSLNSFDGMMNVNVAKLAMKTSPSTAGTLEGNLFSDTPI----- 175 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA---- 225 A+N Y+ K S+T +D+ G+ +YF KT +N WQV D+S P + T Sbjct: 176 --ATNPPGYSLKSSITTYDNLGHPFKADLYFAKTANNTWQVTAYDASLPGNYPGTPLGGP 233 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKP 285 TTL FNA G + N +P T LS L+ + ++I A + NG Sbjct: 234 TTLTFNAFGQIAGAPKLNFTVPNG----QPFTLDLSPLSQVADVAQVSDIKARSVNGNAA 289 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 + I+ DGTV Y + + +I +A+ + + L NV+ SG A +G Sbjct: 290 SAVEGADIDTDGTVYAIYRDGSRRAAFRIPVASVGSPDNLTPRAGNVFDVNPESGPAQIG 349 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A G G + + LE S VDL EL MI AQ Y +N++ +T ++L LVNL+ Sbjct: 350 FANVGGRGHIQSKMLENSTVDLGNELATMIEAQTTYGANSKVFQTGSEMLELLVNLK 406 >UniRef50_Q63D88 Flagellar hook protein n=35 Tax=Bacillus cereus group RepID=Q63D88_BACCZ Length = 437 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 115/432 (26%), Positives = 187/432 (43%), Gaps = 32/432 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 A +++G+NAA L V NNIAN+ T G+K A F D+ + Sbjct: 4 ALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAGTNP 63 Query: 48 --VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDE 104 +G GVK +G + DF+DG+ T T ++ AI NG F + D N G+V Y+R G F + + Sbjct: 64 KSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFGVSK 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + G + GY I + P+ I IP + + T A++ NL + Sbjct: 124 DNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPRNQN 183 Query: 164 LPTVT-PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSD----- 217 + + +S + ++ V K G+ + V ++ S Sbjct: 184 ALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKPKAGEYTYSVSVRNDSKNEKEF 243 Query: 218 -PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ-------QN 269 P L F+ G L + T ++ F + + Sbjct: 244 KPIVGMPDDKPLIFDNLGNLKQTDEPVQKDPVTGEITKGGTITIPFGDGLTLDLSGLTNY 303 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + T G Y I+D G V+ YS+ +++GQ+ +A F N+ GL G Sbjct: 304 PTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSMKVVGQLAVATFPNSGGLMKTG 363 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 + + AT S+G+ +G AG G + A E+SNVDLS E V++++ QR +Q NA+ IK Sbjct: 364 NGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQRGFQGNAKVIK 423 Query: 390 TQDQILNTLVNL 401 D++LN +VNL Sbjct: 424 VSDEVLNEVVNL 435 >UniRef50_Q01PQ4 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PQ4_SOLUE Length = 421 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 36/427 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 +FS A+S L+A AT +DV+GNN+AN T GFK+ F D+ S +VG G Sbjct: 4 SFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFRDLVTQSLGAGLGETQVGFGTG 63 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + FT G ++ LD A+ +GFF ++ G+ Y+R G F++D+ NL G Sbjct: 64 RPLTIRQFTQGAIQSSTGLLDAAVQGDGFFVAKNAQGNTVYTRAGNFQVDDAGNLKTNTG 123 Query: 114 LQLTGYPA-TGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 + G+ + T + +I +P +T ++ +NLNSS + FS Sbjct: 124 ESVQGWTSLDSTTGVLDTNGAIGDIVVPVGAAKQPIASTGFTLDLNLNSSAAAEDTSKFS 183 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 + + V+DS G +H ++V+F KT + W + S T + Sbjct: 184 DT----------IKVYDSLGESHILTVHFQKTDASQWSYSVSVPGEDLSGGTAGTPTDIG 233 Query: 232 ANGTLVDGAMANNIATGAINGA----------------EPATFSLSFLNSMQQNTGANNI 275 A+G+L GA + A + + + + + Q ++ Sbjct: 234 ASGSLTFGADGQLTSPAAGSVIGLDITGLASGAADMHLDWNPRTDNGGGRITQFGQPSSA 293 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 A++QNG L+ + D G ++ YS+ Q ++GQ+ +A+ N E L + G+N + A Sbjct: 294 SASSQNGSAAAQLIRVGLADGGKMLAQYSDGQQVVVGQVAMASVRNPESLIAVGNNNYQA 353 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 + + +G TG G + GA+EAS VD++KE N+IV QR YQ+N++ I T D++ Sbjct: 354 SARTATPAIGLPNTGGRGDIVGGAIEASTVDIAKEFTNLIVLQRGYQANSRVITTVDELS 413 Query: 396 NTLVNLR 402 +NL+ Sbjct: 414 QETINLK 420 >UniRef50_A7GNH9 Putative uncharacterized protein n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GNH9_BACCN Length = 467 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 114/462 (24%), Positives = 173/462 (37%), Gaps = 62/462 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + ++SG++A L V NNIAN+ T G+K A F D+ Sbjct: 4 SLYTSISGMSAMQNALSVTSNNIANAQTVGYKKQKAVFDDLLYNNTVGAKGDDTKAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDE 104 +G GVK +G + D+ G+ T TG VAI NGFF + DS G+ V Y+R G F E Sbjct: 64 KSIGNGVKFSGTSTDYNGGSITMTGINGQVAIEGNGFFVVGDSQGNGVQYTRKGTFGKSE 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQ---------------------GANPTNISIPNTL 143 N +VN +G + Y G+ N+S N Sbjct: 124 NNYIVNGEGQYVLAYKLDEDGKPDTSHPAGPISIPLGSAIDGEVSSKGSLIGNLSRDNKK 183 Query: 144 MAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNA---------- 193 + N+ + VT + + D +GN Sbjct: 184 IIHDFPVFNKSGDNITMRVQIEQVTELVDPDLPIGADGKPILPKDDKGNPIKPEKVEKPV 243 Query: 194 ---HDMSVYFVKTGDNNWQVYTQDSSDPNSI--AKTATTLEFNA-NGTLVDGAMANNIAT 247 + +V N + TLEF+ G L A Sbjct: 244 PGKYKYTVLTRNNSKNEKEFTPIADDKAPGEKKPTLTKTLEFDPITGKLTRTDEAVVRDP 303 Query: 248 GAINGAEPATFSLSFLNSM--------QQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + + F + + NG + Y+I+D+G V Sbjct: 304 VTKEVIKGGQVDIPFGGDTFKLNLSQLTNLPTKDTLDHKDVNGRAAAVAMDYKISDNGYV 363 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 + YS+ T+ + Q+ +A F N +GL G+ + T S+G +G A G + GA Sbjct: 364 MVTYSDNSTRAVSQLAVATFKNQDGLMKVGNGNYVPTASAGDPFIGVAEQNGAGKIIGGA 423 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 E SNVDLS E V++++ QR +Q NA+ IK D +LN +VNL Sbjct: 424 QEGSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDDVLNEVVNL 465 >UniRef50_A0LDL2 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL2_MAGSM Length = 496 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 134/492 (27%), Positives = 201/492 (40%), Gaps = 93/492 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----------AGSKVGLG 51 A S L + VIGNN++N+ T FK +F D+ A +++G G Sbjct: 6 AMYAGSSALTNYGNAMTVIGNNLSNTNTTAFKGSRTTFEDVLIQTVGISGTRASTQIGTG 65 Query: 52 VKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------------SVFYS 95 V V+ I Q G T D+AI GFF++ D+N FY+ Sbjct: 66 VGVSAIDQLMQQGGFAGTSTVTDLAIDGQGFFKVRDANPGSAQLGGGGGNATSSMDTFYT 125 Query: 96 RNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASM 154 R G FK + + +V GL L GY T + T+I++ A K TT S+ Sbjct: 126 RAGDFKQNLDGYMVTNAGLILQGYAVDQTSGE--TSGSMTDINLATYQSAEPKATTAISV 183 Query: 155 QINLNSSDPLPTVT---PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY 211 + L S + T + ++ SYN + V+DS G H++ ++F KT DN W Y Sbjct: 184 GMMLQSDAAIITDANHSTYDPNDPASYNYATPIRVYDSLGQGHNVELHFKKTTDNTWNWY 243 Query: 212 TQDSSD-------------------------PNSIAKTATTLEFNANGTLVD--GAMANN 244 S+ P TA L F+ G L Sbjct: 244 VAVPSEDLSAAQAGTGDLTNMMAVTGAMESAPTGAGYTAGVLTFDTYGRLDTEGSTPITF 303 Query: 245 IATGAINGAEPATFSLSFLNSMQ----------------------------------QNT 270 TG + AE F +++ Q Sbjct: 304 QFTGNSSTAETQQILFDFGDAITADATNDFSIADGAVLYGSGTNTAEVANTGLLGSVQRA 363 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + ++ +QNG+ G L S + DGT+ G Y+N +T+ L QI L +F N + L G Sbjct: 364 SSFTTMSASQNGFSAGFLESLSVGLDGTINGTYTNGETKALYQIGLVDFDNEQALDQVGA 423 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 N+++ T SGV G +G GT+ + LE SNVD+S E+VNMI QR +Q+N++ I Sbjct: 424 NLFAETHLSGVPREGEPNSGALGTIRSYTLENSNVDMSNEMVNMITTQRAFQANSRLITV 483 Query: 391 QDQILNTLVNLR 402 D +L L+ L+ Sbjct: 484 TDGMLEELIALK 495 >UniRef50_Q0EZL8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZL8_9PROT Length = 467 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 139/463 (30%), Positives = 213/463 (46%), Gaps = 64/463 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLGV 52 A SGL + + V+G+NIAN + GFKS + SF D+ + + +VG GV Sbjct: 6 ALFSGASGLTSFGEAVRVVGDNIANVNSIGFKSQSVSFTDVLSQTIGVSSTGSQQVGNGV 65 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNM 111 K+ I+++ G+ NT D+AI+ NG F L D YSR G F+LD+N NL++ Sbjct: 66 KIGTISRNQMQGSIQNTSSATDMAINGNGLFALRDPATNQTSYSRAGSFQLDKNFNLIDG 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL-PTVTPF 170 G + GY P + + + T++S N AK+T + + L+S+ P+ PT T F Sbjct: 126 GGNIVQGYAID--PLSGKAIGSATDLSFGNLAAQAKSTANVTSSLTLDSTAPVLPTGTVF 183 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSS--------- 216 + ++ +++ K VTVFD+ G H +S F + G+N W +T Sbjct: 184 NPADPATFHFKSDVTVFDALGATHVVSQQFTRMGQDAAGNNVWDYHTSVDGKEIVGGTAG 243 Query: 217 ---------------DPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSL- 260 A TL F G LV + + A T + Sbjct: 244 TPTEVGAPTASTVSAGGTVTAIGTQTLVFGPAGELVQENAPPATFNWSGSAASTITLNFG 303 Query: 261 ---------------------SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + L++ Q GA +++GY G L + + GTV Sbjct: 304 NAAGQGTLYPVATADSQGITGTGLDATVQMAGAFATRQVSKDGYAAGFLDTLTTDSSGTV 363 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 G ++N Q + L Q+ LA F N+ L G N+ T SG +L G G GT+T Sbjct: 364 SGTFTNGQRRALFQVALAKFPNDAVLNHVGGNLMQETIQSGSPVLEKPGNGGMGTITPYG 423 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDL+ E V +IV QR Y++N++TI T DQ+L++L+ L+ Sbjct: 424 LEQSNVDLAAEFVKLIVVQRGYEANSKTILTTDQMLSSLMQLK 466 >UniRef50_C5SQ30 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQ30_9CAUL Length = 459 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 119/453 (26%), Positives = 189/453 (41%), Gaps = 52/453 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVK----VAGI 57 A VS L+A +T L I NNIAN T +KS + SFA + S + Sbjct: 6 AMLSGVSALSANSTALAAISNNIANVNTTAYKSVSTSFAANVSSSGSSTYSSGGVSASTA 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLV---DSNGSVFYSRNGQFKLDENRNLVNMQGL 114 G T LD+AI +GFF + D +G +Y+R+G F +++ LVN G Sbjct: 66 LSITEAGALQTTTSSLDLAIDGSGFFVVSEGADGSGGSYYTRDGSFSVNDEGYLVNSSGY 125 Query: 115 QLTGYPATGTPPTIQQGA--NPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF-- 170 L G+ A + + + + I IP + TT+ S+ NLNS+ Sbjct: 126 YLQGWQADSSGNVTAASSVSDLSAIKIPTSSDTPTATTSISLAANLNSATEAYAGEYDIS 185 Query: 171 ----------SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 + + ++V DS G H +++ +K+ N S D Sbjct: 186 TGLSMANYDEDEETGVEPDFEIGISVSDSLGKEHTLTLSVLKSETTNEWTAELWSDDVTG 245 Query: 221 IAKT------ATTLEFNANGTL----------------------VDGAMANNIATGAING 252 + + T+ FN +GTL + + G Sbjct: 246 GYGSEGNIIKSGTITFNEDGTLNEDSLAAFFGAEDLSQIKIDIAASSDETGALRWTSETG 305 Query: 253 AEPATFSLSFL---NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQ 309 A + SLSF + Q + + + +G DL I DDGTV Y + ++ Sbjct: 306 AAAQSLSLSFDDTQGGLTQYATTSEVKSIKADGTVFSDLSDVTIADDGTVNAIYEDGTSR 365 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 +L QI +A F N GL ++ NV++ + SG L T G+G G L + +LEAS VDLS Sbjct: 366 VLAQIPVATFVNANGLTAKSGNVYALSSESGSYTLRTPGSGGAGLLASSSLEASTVDLSS 425 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E ++I QR Y + ++ I T D+++ T++ + Sbjct: 426 EFTSLITIQRAYSAASKIITTSDEMMQTVIESK 458 >UniRef50_C6HWM7 Probable flagellar hook protein FlgE n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM7_9BACT Length = 458 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 128/460 (27%), Positives = 207/460 (45%), Gaps = 73/460 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------SKVGL 50 + A SGL+A T++ VIGNNI+N T GFK+G A FA+++ S+ G Sbjct: 6 SMYVANSGLSAMGTDMSVIGNNISNMNTNGFKAGRAVFANIYGQTLAGKSNAVGPSQPGS 65 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V I FT G+ T LD+AI NGFF + G++ Y RNG LD N +V+ Sbjct: 66 GVYVESIEPLFTQGSVQTTSNALDLAIQGNGFFSFRNRQGAILYGRNGALSLDRNGRIVD 125 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G L GY A + + ++S+P + + K + +INL+++ T Sbjct: 126 QGGHILQGYMADARGKILPK---VRDLSVPQSTIPPKASQNVYSRINLDANMTEKLKTGK 182 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------------------GDNNWQVY 211 + S + +FDS G H ++ F T G + Sbjct: 183 TFSKSS--------NIFDSLGIEHLLTYKFHPTNQVGVWAVEATLDGATLTKGGGSISYT 234 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLN------- 264 P +I ++ F+ NG + + + + +G + ++++ + Sbjct: 235 PASGGKPMTIKGMVASVAFDGNGNVETVNYGGSPVSQSSDGVQNVVYTMALADKAKTPVN 294 Query: 265 -------------------------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + Q + + TQ+GYK GDL + I+ G + Sbjct: 295 LSLFIPKAGQKVADNSKDGTTQQVLDLTQYAEPSTTIEETQDGYKAGDLSNIAIDRAGRI 354 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 VG++SN LG I ++ F N GL S G N++ + SG+A +G AG G G + + Sbjct: 355 VGSFSNGTEHNLGAIAVSTFNNPNGLVSVGANLYKESIGSGIANIGRAGQGGRGQVLANS 414 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 LE SNVDL +++++MI A+R YQ+NA I +Q++NTL+ Sbjct: 415 LEQSNVDLGRQMIDMISAERGYQANASVISADNQLMNTLL 454 >UniRef50_B6IQC5 Flagellar hook protein FlgE n=1 Tax=Rhodospirillum centenum SW RepID=B6IQC5_RHOCS Length = 434 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 104/429 (24%), Positives = 170/429 (39%), Gaps = 31/429 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 A VSGL A + I +NI+NS+T G+K F+ + GS GV+ Sbjct: 6 AMYSGVSGLAAQSAKFAAISDNISNSSTVGYKRSGVQFSTLVTSASSPGSYSAGGVQADL 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-------FYSRNGQFKLDENRNLV 109 T+ G T D+AIS GFF + + + +V +R+G F++DEN NL Sbjct: 66 HTEVSRGGIVQATNSATDMAISGRGFFVVSNRSAAVNGEAPSYMLTRSGAFRVDENGNLH 125 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 N G L G+ + G P+ S ++ T + Sbjct: 126 NTAGYFLQGWKLGPDGKVV--GGEPSRTSFTGLETVNLSSITGLAKATTQIDFAANLPAS 183 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFV-KTGDNNWQVYTQDSSDPNSIAK---TA 225 + + SV + G +++ + ++ N W + D + A Sbjct: 184 QTGKTPPAQPFSTSVDYYTPLGGTGRLTLEWAPQSAANEWNLTIYDGTTSLGTANIVFNG 243 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPAT-------------FSLSFLNSMQQNTGA 272 T G+L + T ++ A + + + Q Sbjct: 244 NTATSGPPGSLNTMSEVGASPTLDVDAATGSIKLDVNGQPIVVNLGRPNQTGGLTQWGDD 303 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 ++G L +I DDG + Y N Q + QI +A+ N +GL N Sbjct: 304 YVPTKINKDGASYAPLERVEIGDDGVMTAIYKNGLRQAVYQIPVADVTNPDGLRRMDGNA 363 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 + ++ SG L AG+G G + ALEASNVD+++EL ++I QR Y SNA+ I+T D Sbjct: 364 FQVSRESGDYYLWDAGSGKAGAVDGAALEASNVDIAEELTSIIETQRAYSSNAKIIQTAD 423 Query: 393 QILNTLVNL 401 ++L+ + L Sbjct: 424 EMLDEVSRL 432 >UniRef50_UPI00016C5508 hypothetical protein GobsU_27906 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5508 Length = 430 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 130/430 (30%), Positives = 187/430 (43%), Gaps = 36/430 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A SGL ++ LDVIGNN+AN T G+K F D+ + Sbjct: 5 ALFVGSSGLTTNSSALDVIGNNLANINTTGYKDQRMVFRDVVYQTLSSGTSADAGTGGVN 64 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VG GV V I FT G TGR LDV + GFF + + V Y+R G F +D Sbjct: 65 PTQVGFGVGVGSIGTQFTQGNLNPTGRSLDVGLQGRGFFVMRNVE-DVAYTRAGAFGVDS 123 Query: 105 NRNLVNM-QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 LV+ G ++ + G G I + T A + Sbjct: 124 AGYLVDPGTGFRVQRFGPVGEGGASNAGDPQFQIPGNLDIQIPFGTGAAGIATTNIDYQG 183 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS-DPNSIA 222 + A ++ V+D+Q A ++V F KT N + S D + Sbjct: 184 NLSSAMQVGEVAT-----TAIQVYDAQSTARAVTVTFTKTAANTYTPSVLVSGADAAQVT 238 Query: 223 KTATTLEFNANGTLVDGAMANNIAT--------GAINGAEPATFSLSFLN---SMQQNTG 271 T + FN+ G +V A T IN A+ T +L + Q G Sbjct: 239 LTGGPISFNSTGQIVGTANTPVTLTLTLGANALPGINTAQTITLNLGTAGLTNGLTQFGG 298 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 A A Q+G G L I+ DG V G ++N +T L Q+ +A F N +GL G+N Sbjct: 299 ATTASAIGQDGSGFGTLTDVSIDADGIVQGKFTNGRTINLAQLAVAGFNNEDGLLRSGNN 358 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + ++ +SG AL+G AG G G+L GALE+SNVD++ E +IVAQR +Q NA+TI + Sbjct: 359 YFRSSVASGEALIGLAGQGGRGSLMGGALESSNVDIAIEFSRLIVAQRGFQVNARTISST 418 Query: 392 DQILNTLVNL 401 + L L N+ Sbjct: 419 NDTLQELANI 428 >UniRef50_C2PD26 Flagellar hook protein FlgE n=1 Tax=Bacillus cereus MM3 RepID=C2PD26_BACCE Length = 441 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 113/436 (25%), Positives = 186/436 (42%), Gaps = 36/436 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A +++G++A L V NNIAN+ T G+K A F D+ Sbjct: 4 ALYTSITGMSATQNALSVTSNNIANAQTAGYKKQKAIFDDLLYNNTVGSRGDGSYAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDE 104 +G G+K +G DF+DG+ T TG ++ AI NG F + D NG +V Y+R G F + Sbjct: 64 KSIGNGLKFSGTATDFSDGSITLTGEKMETAIEGNGLFLVGDRNGGNVEYTRKGSFGVSA 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSDP 163 + + G + GY + + P+ I +P T + T A++ NL+ + Sbjct: 124 DNFITATGGQYVLGYGVKPGTQEVDFSSQPSAIKLPVGTAIGGSVTDKATLGGNLSRNQS 183 Query: 164 LPTVTPFSASN-ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN--- 219 + + + + + + D + G+ + ++ S Sbjct: 184 DLSTDFTIYDDEGNKITLRMDIKQNTKKETVGDKEIDTPIQGEYTYTFSMRNDSKNEKEF 243 Query: 220 ------SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF--------LNS 265 + A ++F+ G L + T + F L Sbjct: 244 KPVLGENDAPITKNMKFDKAGKLERLDEDVQRDPNTKEITQGGTIKIPFANQNLELNLGG 303 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 + I AT G Y I+D G V+ YS+ +++GQ+ +A F N+ GL Sbjct: 304 LTNYPTGKTITATDVAGRPAAIANDYSISDGGFVMMRYSDGSMKVVGQLAVATFPNSGGL 363 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 G+ + AT SSG+ +G AG G + GA E+SNVDLS E V++++ QR +Q NA Sbjct: 364 MKSGNGNYIATPSSGIPAIGVAGENGAGNVRGGAKESSNVDLSVEFVDLMLYQRGFQGNA 423 Query: 386 QTIKTQDQILNTLVNL 401 + IK D++LN +VNL Sbjct: 424 KVIKVSDEVLNEVVNL 439 >UniRef50_A0Q031 Flagellar basal-body rod protein FlgG n=1 Tax=Clostridium novyi NT RepID=A0Q031_CLONN Length = 485 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 121/482 (25%), Positives = 186/482 (38%), Gaps = 82/482 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +SG+ T LDV GNNIAN +T GFKS F DM + Sbjct: 4 SMYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRL-------VDSNG------- 90 +VGLGV+VAGI + G T R LDVA+ G+F + ++ G Sbjct: 64 GKQVGLGVQVAGIDTVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVSESE 123 Query: 91 --------SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANP-------- 134 V Y+R+G F LD NL+ G ++ GY T + Sbjct: 124 HTMSGGAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINEKDSTGNATGDVSIDYNANG 183 Query: 135 ----TNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQ 190 N L A+ T + +++ +N D + Sbjct: 184 AVNFVNADGEFGLKASNTLVPLRIPDSVHMKATTKDKQNMIITNGDKILFDNDGDATNGI 243 Query: 191 GNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAI 250 ++S+ G N +V + + + + N T ++ A A+ I AI Sbjct: 244 QGFPEISLDDTFKGKENVKVEIKYDTKDKAGKDKGWIIFLNGKKTFLE-ANASEIDDAAI 302 Query: 251 NGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG----------------------DL 288 +G + A S S +++ + I T + L Sbjct: 303 DGVDAALLSASEKKDIKELLNGSKITITDPDPNTTNIDTDDKKAKYKWSFTLQPECDKKL 362 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL---- 344 S+ I DG V G + LGQI A+F N EGL EG N++S T +SGV + Sbjct: 363 RSFAIEKDGLVKGVLDDGTVTALGQIATASFKNQEGLKKEGKNLYSNTANSGVPTVRSGL 422 Query: 345 ----GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 +G + G LE SNVDL+++ +MIV R +Q++ + I T D+IL ++N Sbjct: 423 GTPKNLDNGDGYGEMLQGMLEMSNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIIN 482 Query: 401 LR 402 L+ Sbjct: 483 LK 484 >UniRef50_Q1MRH2 Flagellar hook protein FlgE n=6 Tax=Desulfovibrionaceae RepID=Q1MRH2_LAWIP Length = 502 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 123/499 (24%), Positives = 194/499 (38%), Gaps = 99/499 (19%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG------------SKVG 49 + +G+ +T L + NNIAN+ T G+K F D+F+ ++ G Sbjct: 4 SLFIGATGMKTHSTGLGTVSNNIANANTIGYKQQQVVFQDLFSQDLAIGSTGSQGPNQAG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 +G +V + FT G D+AI GFF++ + V Y+R G F+ ++ L Sbjct: 64 MGAQVGSVRTIFTQGAFEPGNSVTDLAIGGKGFFQVTLED-KVHYTRAGNFRFTQDGFLN 122 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTL---MAAKTTTTASMQINLNSSDPLP- 165 + G L G + P ++ P + + AKT+T + +NL S Sbjct: 123 DPSGFTLMGSRISNNPNIKKETLEPIQLDFNDPTVAKSPAKTSTALNAVVNLGDSTDKTQ 182 Query: 166 -------------TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ--- 209 + +Y+ + V+D QGN+HD++VYF + Sbjct: 183 SEANPYFALLESWKGNGTPPISTSNYSYAQPMRVYDQQGNSHDITVYFDGAPSSTGSKTF 242 Query: 210 -----VYTQDSSDPNSIAKTA-----TTLEFNANGTLVDGAMANNIATGAIN-------- 251 + + S +A T+ F++NG L + + + Sbjct: 243 EYLVAMNPSEDGSAASGTDSAGLLMSGTMTFSSNGELKNMTAFTPTGSATKDLNAWQPAP 302 Query: 252 -------------GAEPATFSLSFLNSMQQNTGANNIVATTQNG---------------- 282 GA +L F QQN A + G Sbjct: 303 LVNGLPQFSANFVGAGIQPLTLDFGIKSQQNMWAGAPASAAAIGTDIGKLPSMMPIQTSS 362 Query: 283 -------------------YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 Y GDLV I +G + G YSN Q I LA F + + Sbjct: 363 GNSTARNGSSSTRRYSQDGYPQGDLVDVTITSEGKLQGKYSNSQVVDFYNIPLARFTSED 422 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL EG+N +SAT SG G GT N+G L+ LE SNVD+S+E+VNMI+ QR +Q Sbjct: 423 GLRREGNNHYSATLDSGGPEFGLPGTSNYGKLSVNQLETSNVDMSREMVNMIIIQRGFQM 482 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++++ T D +L + L+ Sbjct: 483 NSKSVTTADTMLQKALELK 501 >UniRef50_B9JZL6 Flagellar hook protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JZL6_AGRVS Length = 411 Score = 250 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 125/414 (30%), Positives = 197/414 (47%), Gaps = 24/414 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A + +VSGL A + L IG+NI+N++T G+K +F+ + G G Sbjct: 6 AMNSSVSGLTAQSNKLTSIGDNISNTSTTGYKGTETAFSSLVNG-----GTTSTTTQTVS 60 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPA 121 G +T D+AI +G+F + D G VF +R G F++DE+ LVN G L GY Sbjct: 61 QSGDLESTSSETDLAIDGDGYFVVQDDEGDVFLTRQGDFEIDEDGYLVNSSGYTLLGYSY 120 Query: 122 TG--TPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD-SY 178 I + I + + A TTT + NL S + + + S+++AD ++ Sbjct: 121 DNGEPASVINGFDGLEPVKIDTSEVTASATTTGEVSGNLESDEEVVSGDTPSSNSADATF 180 Query: 179 NKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA-----------TT 227 K S+ +D QG + +YF KT D+ W+V + + N TT Sbjct: 181 TAKSSIVTYDEQGASTQYDIYFTKTDDDEWEVSIYRNDEANDDDDGTSFPYDNGELGSTT 240 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 L F++ G L DG+ + T + G T L F + Q T + + + NG Sbjct: 241 LTFDSAGELEDGSTSTLSFTDSETG---LTIDLDFSDITQTATSTS--IEGSANGSAASS 295 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Y I DG + S+ T +I LA A+ + L G + SG ++G A Sbjct: 296 SSDYTIGSDGVISTVSSDGTTTDTYKIALATVASPDNLEEVGGTAYKVDADSGTVVVGFA 355 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 GTG+FGT+ + LE+SNVDL+ EL +MI AQR Y +N++ +T +L+T++N+ Sbjct: 356 GTGSFGTIESSTLESSNVDLASELSDMIAAQRAYSANSKVFQTAADMLDTVINM 409 >UniRef50_B6AMB9 Probable flagellar hook protein FlgE n=2 Tax=Leptospirillum sp. Group II RepID=B6AMB9_9BACT Length = 457 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 126/460 (27%), Positives = 198/460 (43%), Gaps = 74/460 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----------SKVGL 50 + A SGLNA T++ VIGNNI N T GFK G A FA+++ S+ G Sbjct: 6 SMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQPGS 65 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 GV V I Q+FT G+ + LD+AI NGF + +G FY+RNG+ LD+ +V+ Sbjct: 66 GVYVDAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRIVD 125 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 L GY ++I +P T + K T +INL++ Sbjct: 126 TSNRALQGYMNKNGKIQPI----LSDIRVPQTTVPPKATQNVFSRINLDAGMTEKLKEGR 181 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA----- 225 + +FDS G H ++ F+ T + + Sbjct: 182 EFEKSS--------NIFDSLGIQHLLTYKFIPTSVAGQWAFQATMDGASLTKGGGSISYP 233 Query: 226 --------------TTLEFNANGTLVDGA-------------------------MANNIA 246 ++F+ NG + A ++ Sbjct: 234 PLGRKTPKTLKGIVGLIQFDGNGIVKSVNYGGSPLKRDANGVVHALYQTTLADKAATPVS 293 Query: 247 TGAINGAEPATFSLSFLNS-------MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + + T + +N + Q ++ + TQ+G+K GDL + I+ DG + Sbjct: 294 FDVVIPTKGQTIRPNRINGVTQQVLQLTQFNAPSSTIEETQDGHKSGDLNNLAISRDGKI 353 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 VG++SN ++LG + +A+F N GLAS G N + + +SGV G G G G L + + Sbjct: 354 VGSFSNGVQKVLGVVSIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNS 413 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 LE S DL +++V+MI A+R YQ++A I T + ILNTL+ Sbjct: 414 LELSTTDLGRQMVDMITAERGYQASASIIATDNTILNTLL 453 >UniRef50_Q6AGA2 Flagellar hook protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AGA2_LEIXX Length = 390 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 124/418 (29%), Positives = 189/418 (45%), Gaps = 50/418 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + V GL A T LDV NNIAN T GFK+ + F D + Sbjct: 4 SLDSGVFGLQAQQTMLDVTANNIANVNTAGFKASSVQFEDALSQVTRTASAPTDVIGGTT 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 + VGLGV+ AGI D+T G T TG+ ++ ++ +GFF + + G Y+R G F D+ Sbjct: 64 PAAVGLGVRAAGIDTDWTQGATQTTGKATNLTLNGDGFFVIRSA-GQTQYTRAGNFTTDD 122 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + LV G ++ G+ A + G P+ I+IP + + TT++ SD Sbjct: 123 SGTLVTPDGARVQGWGA--AGGVVNSGVAPSTITIPLNVQSPAVATTSATATGNLPSD-- 178 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 A SV V D+ G +++ F +G +W V D++ Sbjct: 179 ---------AAAGAVVSSSVRVHDAAGGERTLTLTFTSSGGGSWSVNAADAN-------- 221 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 G G +A + G + M GA + T QNG Sbjct: 222 ---------GATASGPLAFTAGARSTGGTLAVGGISVDMTQMTVYAGATSAGITKQNGSA 272 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 G L S+ + DGT+ G++SN +G++ +A F+N G G + ++AT SG+ + Sbjct: 273 AGALQSFTFDQDGTIEGSFSNGARLAIGRVAVATFSNPSGFQKAGSSAFTATADSGIPQV 332 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A GT+T GA E SNVDL +E N+IV+QR +Q++A+ I T D+IL L L+ Sbjct: 333 --AADSGTGTITVGAYEGSNVDLGREFTNLIVSQRAFQASARVITTSDEILQELTQLK 388 >UniRef50_C5CYE8 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYE8_VARPS Length = 395 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 115/415 (27%), Positives = 178/415 (42%), Gaps = 39/415 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------KV 48 + ++GL + L VI NN AN T GFKS + FADMF +V Sbjct: 4 SIYVGMTGLLGYSRGLRVIANNTANINTPGFKSSSLQFADMFYSGGNLGGGSTSQNRDQV 63 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNL 108 G G+ AG + F G TG LD+A+ G F L D+NG Y+R GQFK D + L Sbjct: 64 GFGLSTAGTSLSFKQGELRQTGNDLDMAVDGQGLFALQDANGKTTYTRAGQFKFDADGTL 123 Query: 109 VNM-QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 V+ G ++ G G I ++ + T+ NL Sbjct: 124 VSRVNGEKVMGLDDRGGLVAITLAGQMMSL--------GRPTSRVEFSGNL--------- 166 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 SN + G + V D+ G +H +++ F + + + Sbjct: 167 -----SNTVTEQTIGGIAVVDASGASHTLTMKFSVVSAAQSGTTMKVELMEGTTVVSTGQ 221 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 + F G A A A G P +L F + + G ++ +Q+G PG Sbjct: 222 MVF--VGGKPTPETAKLQAAYAPAGQPPMALTLDFSSDVVLFAGQTSLKVDSQDGIGPGA 279 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 L + DG + NYSN T ++ LA F + + + S GDN + + LG A Sbjct: 280 LSGTTFDADGNLTLNYSNGSTVKGARLALARFDSPDAVGSLGDNQFEQLDENAWH-LGVA 338 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G FG ++ G +E SNVDLS+E ++++ QR YQ+++Q I T + +L L +++ Sbjct: 339 GEGAFGKVSAGRVEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQELFSMK 393 >UniRef50_A9KNF2 Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNF2_CLOPH Length = 479 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 119/476 (25%), Positives = 200/476 (42%), Gaps = 76/476 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T +DVIGNNI+N T GFK+ +A+F+D+ + Sbjct: 4 SLYSGVSGLRVHQTKMDVIGNNISNVNTVGFKASSATFSDILYQTTKSASGPNPNTGTAG 63 Query: 47 ----KVGLGVKVAGIT-QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFK 101 ++GLG +A IT G + T D+ I +GFF + + G+ F+++ G F Sbjct: 64 TNAMQIGLGANLASITASITKTGGSQRTDNPFDLMIEGDGFFVVNNGVGN-FFTKAGSFN 122 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNI---SIPNTLMAAKTTTTASMQINL 158 +D L G + G+ + P + + + S N A + TT + N+ Sbjct: 123 VDAAGTLCTPTGATVMGWQPSREDPRKTVPGSVSPLRIMSPENLYSAPEATTDIYLHGNI 182 Query: 159 NSSDPLPTVTP-------FSASNADSYNKKGSVTVFDSQGNAHDMSVY--FVKTGDNNWQ 209 +S D T + F + +SY + + + + + +++ + K GD+ + Sbjct: 183 DSMDTNLTSSTGRIVNMSFFDNLGNSYTAEVKIKQSEDSKSDYKVTIQNIYDKKGDSIFA 242 Query: 210 VYTQDSSDPNSIAKTATTLEFN-----------------------------ANGTLVDGA 240 D + + + +FN ANG V Sbjct: 243 KKVVDPDTGDITYEASNITDFNFGNGTGSVTVNDDGTIEVDCDEIDLKFNGANGNFVSVG 302 Query: 241 MANNIATG-----AINGAEPATFSLSFLNSMQQNTGANNIVATTQ--------NGYKPGD 287 + AT + ++ F + N V +T+ G G+ Sbjct: 303 DDADNATSIKFKVNADPDPFKDVNIDFSSITMYNNSGTTTVESTKGAKADGTGAGKAAGN 362 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL-LGT 346 + I+ G + G Y N +LLGQ+V+A F+N GL + G+N++SAT +SG +G Sbjct: 363 MSGISIDQQGMIFGTYDNGDRKLLGQVVVATFSNPAGLEAIGNNMFSATPNSGEFNGVGE 422 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 T + G G LE SNVDLS++ MI QR +Q+N++ I T D +L L+NL+ Sbjct: 423 DITSSGGKFITGVLEMSNVDLSQQFTEMITTQRGFQANSRIITTSDTLLEELINLK 478 >UniRef50_Q24T89 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24T89_DESHY Length = 383 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 69/424 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A+SGL +DVIGNNIAN T GFK +F+ M + + Sbjct: 4 SLYSAISGLKNHQIKMDVIGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG V+ I Q T G++ +TG+ D+ I GFF L + NG YSR G F D+ Sbjct: 64 PAQIGLGSMVSSIDQIMTPGSSQSTGKDTDMMIQGKGFFVLQN-NGETVYSRAGAFTQDD 122 Query: 105 NRNLVNM-QGLQLTGYPATGTPPTIQQGANPTNISIPNTLM--AAKTTTTASMQINLNSS 161 + L G ++ G+ + S + A K + L+ + Sbjct: 123 DGTLTEPGTGAKVMGHMYGMEKSVDTMSTTTEDESKIDWTTLEAIKFNLGENPPYVLSEA 182 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSI 221 +P + + Y+ + + Sbjct: 183 TKIPPDAWVKSGDEWVYSNPSLI-------------------------------GVNATT 211 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 + N GT+ T + TF+++ L+ + Sbjct: 212 TAPTGAVFDNTRGTITVTTDP----TKPADDTGIYTFTITNLDGEYADGTDI-------- 259 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQ---TQLLGQIVLANFANNEGLASEGDNVWSATQS 338 L S+ ++ G + G YSN + ++++GQ+ +A+F+N+ GL + G++ ++A+ + Sbjct: 260 --PLATLTSFSVDSKGAITGVYSNGEASASRVIGQVAIASFSNDAGLLNLGNSFYAASNN 317 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG A +G AG G + +E SNVDLS+E +MIV QR +Q+N++ I D +L L Sbjct: 318 SGQASIGGAGEDGRGNIVPSTVEMSNVDLSQEFTDMIVTQRGFQANSRVITVSDSLLQEL 377 Query: 399 VNLR 402 ++L+ Sbjct: 378 IDLK 381 >UniRef50_A0AGF2 Complete genome n=21 Tax=Listeria RepID=A0AGF2_LISW6 Length = 411 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 110/420 (26%), Positives = 176/420 (41%), Gaps = 36/420 (8%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL------------ 50 A+SG+NA L V NNIAN+ T G+K + F D+ + +G Sbjct: 5 MYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAGTNPM 64 Query: 51 ----GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-SNGSVFYSRNGQFKLDEN 105 G K+ I D+T G+ T+TGR D A+ GFF D + G++ Y+R+G F + +N Sbjct: 65 SFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFAVSDN 124 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L QG + GY + P I N+ + + T S+ N+ Sbjct: 125 NYLTTQQGKYVMGYATDKNGNVLNGNLQPIQI-PLNSAIPGEATKNGSLSGNIPLDW--- 180 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFV----KTGDNNWQVYTQDSSDPNSI 221 + ++V+D+ G H + V N Y Sbjct: 181 ---------GEKDTISSELSVYDNAGGKHKLQVNMKAATPDASGNVSYEYEIQMDGKALT 231 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 TL +NA G L + NI + + L+ G N + + T + Sbjct: 232 PPVTGTLNYNAQGELTNPDALKNIQINSTVNGKQVNMGLNLSGLTNY--GTNQVFSPTSD 289 Query: 282 GYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGV 341 G + Y + D G + +YS+ + Q+ +A F+N +GL G+ + SSG Sbjct: 290 GKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGD 349 Query: 342 ALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A+ G AG G ++ +LE SNVDLS+E VN++ Q +Q N + I+ D ++ +VNL Sbjct: 350 AVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNL 409 >UniRef50_C9LSP4 Flagellar hook protein FlgE n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSP4_9FIRM Length = 496 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 132/494 (26%), Positives = 203/494 (41%), Gaps = 95/494 (19%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + VSGL + T +DVIGNNIAN T GFKS +FAD ++ Sbjct: 4 SLFSGVSGLKSHQTRMDVIGNNIANVNTIGFKSSRVTFADTLYQTQSGAAAPTGTVGGTN 63 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKL 102 +GLGV VA + Q F D + TG+ D+A+S NG F + G +Y+R G F Sbjct: 64 PKQIGLGVGVASVDQLFGDASPQATGKNTDLALSGNGLFVVSRDAGGKDKYYTRAGNFSF 123 Query: 103 DEN-RNLVNMQGLQLTGYPATGTPPTIQQGANP-TNISIPNTLMAAKTTTTASMQINLN- 159 D N +V G + G+ A +G I M AK TTT S + N+N Sbjct: 124 DANYNYVVPGSGYHVVGWNADENGSIDTKGTPTGIQIKDAMRSMGAKATTTISYKGNMNS 183 Query: 160 -------------------------------------SSDPLPTVTPFSASNADSYNKKG 182 ++ + + + S Sbjct: 184 SVPTITSIRNQTGAVVASPAKVDGVTNTSLTLTLSDGTTQTVTAKSNYEYRTKCSMPITT 243 Query: 183 SVTVFDSQGNAHDMSVYFVKTGD--------NNWQV-------------------YTQDS 215 V+DS GN H + F K + W+V +D Sbjct: 244 IANVYDSLGNLHKVPFLFTKVPGSGTPPLMYDEWEVSLSPATTSGGTLDPVNQCSIKEDD 303 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF-------LNSMQQ 268 ++ TL+F+ NG V GA + G+ + + S L S+ Q Sbjct: 304 GSWTTVKMNKKTLKFDQNGKYVSGAGDPELTLQNGAGSISGSGTPSATMTATVDLKSLTQ 363 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 +G++ I A +G+ G L + G + G Y+N + + L Q+ +A F N GL Sbjct: 364 YSGSDTIKA-DYDGHSAGTLKEINTDQSGILTGTYTNGEKRALAQVAVAQFDNAPGLTKA 422 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G N+++ + +SG A + T TLT ALE SNVD++ E +M+V QR +QSN++ I Sbjct: 423 GANLYTESNNSGTANIKTVSALGL-TLTPSALEMSNVDVANEFADMVVTQRGFQSNSKVI 481 Query: 389 KTQDQILNTLVNLR 402 D++L T++N++ Sbjct: 482 TVGDEMLETVINMK 495 >UniRef50_B7HLV4 Flagellar hook protein n=32 Tax=Bacillus cereus group RepID=B7HLV4_BACC7 Length = 407 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 178/417 (42%), Gaps = 32/417 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A +++G+NA L V NNIAN+ T G+K A F D+ Sbjct: 4 ALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAGTNP 63 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDE 104 +G GVK++G D+TDGT T TG A+ NGFF + DS G++ ++R G F + Sbjct: 64 KSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFTISS 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + + N +G + YPA + + P + +P T+ + Sbjct: 124 DYYITNTEGQYVFAYPADSSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIP---- 179 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 AD+ + V+D+ GN M V F + G++N++ +D Sbjct: 180 ----------ADAKQITQELPVYDNAGNTWTMRVEFKQDGEHNYKYKVYMRNDSKKETAF 229 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 N + A T + F + + + T +G Sbjct: 230 NEVDGAGGEVKFDAVGKPNPVNPEANIPFNGGTVKIDFS-KLTNHPTEKTLAVTDVDGRA 288 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 + I D G V+ YS+ + GQ+ +A F N GL G+ ++AT ++G+ + Sbjct: 289 AATVKDCFIADGGYVMVKYSDGSMKAAGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAM 348 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G +G G + A E +NVDLS E V++++ QR +Q NA+ IK D++LN +VNL Sbjct: 349 GVSGQNGAGKVRGSAQEGANVDLSVEFVDLMLYQRGFQGNAKVIKISDEVLNEVVNL 405 >UniRef50_B7GGB1 Flagellar hook protein FlgE n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GGB1_ANOFW Length = 460 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 111/466 (23%), Positives = 168/466 (36%), Gaps = 75/466 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + + G+ LDVIGNNI+N TYG+K +F D+ + Sbjct: 4 SMFTGIGGIRNFQYKLDVIGNNISNVNTYGYKKARVTFKDLVSQQISAATSSTGTRGGIN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-------------- 90 ++GLG + I T G+T T R LD+A+ +GFF + N Sbjct: 64 GKQIGLGSGLGSIETIHTQGSTQTTSRPLDLALGGDGFFVVGSINDVTLISMDGPAGKLG 123 Query: 91 --------------SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTN 136 ++ ++R G F LDE +VN G L G A T+ A Sbjct: 124 TNKVNTGVPIDRVFNLSFTRAGNFYLDEYGYIVNSDGQYLIGEAAIKDVDTVITNAP--- 180 Query: 137 ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 A+ +N + + + D+ + V + +++ Sbjct: 181 -------HVAQARRDLETFLNSTLVNFIKKWKDEFTKDPDNNPTTQTDFVNFIRNFNNEL 233 Query: 197 SVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPA 256 K T ++ + L+ A+ T A Sbjct: 234 KNLNEKITGKTDPNDTTLATAGTYFNDRVSPKASINPVPLLPENEADWPDTLAEAEKMMG 293 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGY----------KPGDLVSYQINDDGTVVGNYSNE 306 + ++ + + G P S+ I DG V SN Sbjct: 294 PYLEGISGFVESVQQVLQDYSEPKYGNVTSFEPGLIQIPKTAKSFGITADGKVTFIDSNG 353 Query: 307 QTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA----------LLGTAGTGNFGTLT 356 Q ++ GQI+LA F N GL G N + T +SG L G G + Sbjct: 354 QLKIAGQILLAQFPNPTGLEKMGGNTFKETNNSGKLDRNANGLTINELSRPGLNGAGEII 413 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +GALE SNVDLS+E MIVAQR +Q+N + I T D+IL LVNL+ Sbjct: 414 SGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVNLK 459 >UniRef50_B4RG77 Flagellar hook protein FlgE n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG77_PHEZH Length = 452 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 103/451 (22%), Positives = 184/451 (40%), Gaps = 51/451 (11%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAGI 57 VSGL A ++ L I +NIAN T +K +FA++ G GV+ Sbjct: 1 MLAGVSGLVANSSALAAISDNIANVNTVAYKRNQVNFANVVTAQAVKGKYSAGGVQSVTR 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVD------SNGSVFYSRNGQFKLDENRNLVNM 111 G + D+AIS +GFF + + ++R+G F +D + +VN Sbjct: 61 QFVSQQGLIQASNSTTDLAISGDGFFVVANKGLGLTGADPRSFTRSGAFAVDSDGYMVND 120 Query: 112 QGLQLTGYPATGTPPTIQQGANP-----TNISIPNTLMAAKTTTTASMQINLNSSDPLPT 166 GL L G+P ++ N+ + +A T + +N + Sbjct: 121 AGLYLQGWPVQADGTFNVNPSDLSLMQSINVKNLGSAVAPTTELGVTANVNKDGPVSASE 180 Query: 167 VTPFSASNADS--------------YNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVY 211 T + A S + + V DS G + +++ +K N W Sbjct: 181 ATYDGSVAATSMAEYADSAGATGVKPDFVIEMNVVDSAGGSRKIALAMLKDDVANAWHAE 240 Query: 212 TQD--------SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS---- 259 ++ T+ FNA+GT+ G + + +++ + AT Sbjct: 241 IYAVPASSVDLAAGTPPGQLARGTINFNADGTINLGTTTAALQSLSLDASAGATPRWATG 300 Query: 260 --------LSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 L+ + Q + + + A NG G++++ ++ +G V Y N Q + + Sbjct: 301 LGLAAQDINLALDKLSQYSSTSTVTAIQSNGAGVGNVIAIDVDPEGVVSAVYDNSQIRKI 360 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 +I +A F N + LA+ N + T +G + AG G G ++ +LEAS VDLS E Sbjct: 361 AKIGVATFPNPDALAAVSGNAYRPTIPAGEMTVKEAGIGGAGKISPSSLEASTVDLSAEF 420 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +I Q+ Y ++++ I T DQ+L L+N++ Sbjct: 421 TGLIATQKAYSASSKIITTADQMLEELINIK 451 >UniRef50_C6XM57 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM57_HIRBI Length = 458 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 107/452 (23%), Positives = 180/452 (39%), Gaps = 51/452 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----SKVGLGVKVAG 56 A +GL A A+ + NIAN T GFK F M S V+ Sbjct: 6 ALLAGTAGLRANASAMAATSENIANVNTVGFKRIRNDFTAMLNNQNYQSSYSAGAVRATA 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG------SVFYSRNGQFKLDENRNLVN 110 T GT ++ +AIS G+F G Y+R GQF DE L N Sbjct: 66 TTLMREQGTLQSSSVSTHMAISGEGYFVTRARGGDATSFDEYSYTRAGQFAPDEGGYLKN 125 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNIS---IPNTLMAAKTTTTASMQINLNSSDPLPTV 167 G L G+P + T +S + A+ + S+ NLN+ + Sbjct: 126 TAGQYLYGWPIVNDQVVNASPTDLTALSAVRVSGYGGVAEASANLSITANLNADQEVNPA 185 Query: 168 TPFSASNAD---SYNKKGSVTVFDSQGNAHDMSVYFVKTGD-NNWQVYTQDSSDPNSIAK 223 T + A + + + V+DS+G H ++ F+KT + N W+V + + Sbjct: 186 TYTAGDMAAGNITPDFTTPLEVYDSKGGRHTVNFSFLKTANANEWEVEAYVTPSTDIEGV 245 Query: 224 TATTLE-----------------------FNANGTLVDGAMANNIATGAINGAEPATFSL 260 T L F+ G++ GA A+ Sbjct: 246 TDGLLANGKMIFTASGLIDPVATNALADGFDPEGSISIGASDPASVGTTPRWADGLGIEA 305 Query: 261 ----------SFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 + + Q + + + +T +G G L S +++DG V+ Y+N ++ Sbjct: 306 QDIQLDLGNGNSTTGLTQYSSDSILDTSTVDGVPFGSLASVDVDEDGVVIAQYTNGFSRK 365 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 + Q+ +A F N GL ++ + + +G L +G G + + ALE+S VDL++E Sbjct: 366 IFQVPVATFGNEGGLIAQAGGSYRSGPETGDMNLRAPKSGEAGEVISSALESSTVDLAEE 425 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 N+IV QR Y + ++ I T D++LN L++++ Sbjct: 426 FSNLIVTQRAYSAASKIITTADEMLNELISIK 457 >UniRef50_Q1YLP3 Putative flagellar hook protein FlgE n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLP3_MOBAS Length = 388 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 132/411 (32%), Positives = 184/411 (44%), Gaps = 41/411 (9%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG----LGVKVAGIT 58 F +VSG+NA A L + NIANS+T G+K + FA + G VK Sbjct: 7 FRTSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLAQGGGEYNPGSVKTQVRQ 66 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR-------NLVNM 111 G+ T G D+AI +GFF + D+ G FY+R G F LVN Sbjct: 67 SISQQGSIAATSSGSDLAIQGDGFFVVQDTAGREFYTRAGSFVQRTETIGGKETTFLVNT 126 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G +LTG P G AA + ++D F Sbjct: 127 AGYRLTGSPVGGG-------------------AAAPIELPVGAIVAPKATDAGAFTIQFP 167 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 S A KK S+ V+DS G A ++ V KT N W V DS P + TT+ F+ Sbjct: 168 ESAAVGDTKKSSMVVYDSIGKAIEVPVDMEKTAANTWTVSYTDSGGPQT-----TTIVFD 222 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSY 291 N A AN T F S+ + + T NG PG + Sbjct: 223 PNTGRPTAAPANMTYTHVNGDTVDIEF-----GSLTEYATDFSSKLVT-NGNPPGSFTGF 276 Query: 292 QINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGN 351 ++GT+ G + Q L ++ LA FA+ + L + NV+SAT SSGVA LG GT Sbjct: 277 AFAENGTLSGVMNTGQLIPLYEMSLARFASPDQLQASAGNVYSATASSGVAALGGPGTNG 336 Query: 352 FGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G+L + LE SNVDL+ EL +MI +QR+Y +N++ +T +IL+ LVNL+ Sbjct: 337 YGSLVSSGLEQSNVDLASELTSMIESQRSYSANSKVFQTGAEILDVLVNLK 387 >UniRef50_Q28JM2 Flagellar hook protein FlgE putative n=30 Tax=Bacteria RepID=Q28JM2_JANSC Length = 452 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 110/440 (25%), Positives = 185/440 (42%), Gaps = 48/440 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA----GSKVGLGVKVAGI 57 + + V+GL+ A+ L I +NIANS T G+K TA F+ M G+ GV+V Sbjct: 19 SLNAGVAGLSVNASRLATIADNIANSGTNGYKRATADFSSMVIDQGGGTYSAGGVRVTTG 78 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV---------FYSRNGQFKLDENRNL 108 G T G D+A+ GF + S+ + + G F+ D + L Sbjct: 79 RLIDQSGALATTNNGTDLAVRGRGFLPVTRSSAVNAAAGAELPLYLATTGSFRTDADGYL 138 Query: 109 VNMQGLQLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 V G+ L G+PA A + + ++ TT S+ +NL +D Sbjct: 139 VTSSGVTLMGWPADADGNVPSFPRDTSAGLEPVQVNVNQFTSEPTTRISLGVNLPGTDTT 198 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------GDNNWQVYTQDSSD 217 S + ++ SV FD+ G + + +F T N W + +DS+ Sbjct: 199 --------SESSGDTRQLSVEYFDNLGTSQSIEAFFTPTVPVVGDPASNTWTMTLRDSAS 250 Query: 218 PNSIAKTATTLEFNAN--GTLVDGAMANNIATGAINGAEPATFSLSFLNS---------- 265 N++ T + ++ G + TG A T ++ L Sbjct: 251 NNAVIGEYTVVFDDSRTGGGTIQSVSQPLPVTGGGWSATEGTLTVDVLGGPIEINIGAQG 310 Query: 266 ----MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 + Q + + +++G G+LVS +++ +G V N+ T+ + QI L + N Sbjct: 311 SGSGLTQLSDNFAPTSISKDGSPVGNLVSVEVDPNGFVKANFDVGITRTVYQIPLIDLPN 370 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL +E + +++ + SG L AG G G + ALE S D++ EL +I QR Y Sbjct: 371 PNGLIAEDNQLYTTSAESGSFFLWDAGDGPTGDVVAFALEESTTDVAAELTQLIQTQRAY 430 Query: 382 QSNAQTIKTQDQILNTLVNL 401 SNA+ I+T D++L N+ Sbjct: 431 SSNAKIIQTVDEMLQETTNI 450 >UniRef50_C4G364 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G364_ABIDE Length = 495 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 109/492 (22%), Positives = 192/492 (39%), Gaps = 92/492 (18%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+GL T +DVIGNNIAN T GFKS + F+D+F + Sbjct: 4 SLFSGVAGLKVHQTKMDVIGNNIANVNTVGFKSSSTVFSDVFYQTTQTASGPNKESNVGG 63 Query: 47 ----KVGLGVKVAGITQDFT-DGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFK 101 ++GLG V+ I+++ T G + T LD I+ + FF + + G ++++NG FK Sbjct: 64 VNPKQIGLGANVSSISKNITDPGGSQTTNNALDCMINGDSFF-VTKNGGRTYFTKNGAFK 122 Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS---IPNTLMAAKTTTTASMQINL 158 +D + LVN +G ++ G+ P + +N++ N + TT + N+ Sbjct: 123 VDTDGTLVNSEGAKVQGWQVDPDDPNKIKPGPVSNLNIMSPENMYTNPEATTAGYLSGNI 182 Query: 159 NSSDP------LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN----NW 208 + +D + + Y + S+ + + ++ + + Sbjct: 183 DRTDSQIAPGSAGRTFQMNFYDNLGYEYTAKFVMKQSKNSDNAYNIELKDILKDGKSIMY 242 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPA------------ 256 +D L +++ G N +P Sbjct: 243 NAEKKDDGSIEYTTTGWGATLSKDKQELSSVGTVDSVDDGKPNFGDPGKFNMVFDGTTGK 302 Query: 257 --------------------------------------TFSLSFLNSMQQNTGANNIVAT 278 L F + ++ + + Sbjct: 303 FKSLVEDPSDEYDPSGMDDTVIKKMYLNIGGKTPNPFKNIELDFSQMTMFASQTSSKIES 362 Query: 279 TQ-------NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 T G G + I++ G + G+Y N +LLGQI +A+F N GL + G++ Sbjct: 363 TMGDVDGNGKGKMKGTMKGATIDNAGKIYGSYDNGDLKLLGQIAVASFKNPSGLEAVGNS 422 Query: 332 VWSATQSSGVAL-LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 + T +SG +G T + G ++ G LE SNVDL+ + +MI QR +Q+N++TI T Sbjct: 423 NFVETMNSGKFDGVGKDITTDGGKISTGMLEMSNVDLAAQFTDMITTQRGFQANSRTITT 482 Query: 391 QDQILNTLVNLR 402 D IL L+NL+ Sbjct: 483 TDSILEELINLK 494 >UniRef50_Q89F43 Flagellar hook protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89F43_BRAJA Length = 410 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 118/419 (28%), Positives = 178/419 (42%), Gaps = 27/419 (6%) Query: 1 MAFS----QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GV 52 M+ VSG++A + L + +NIAN T G+K + F+ + S G V Sbjct: 1 MSLYGVMRTGVSGMSAQSNKLSTVSDNIANVNTTGYKRASTEFSSLILKSGSGNYDSGAV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLDENRNLVNM 111 + G T T D+A+ NGFF + ++N + Y +R G F D NLVN Sbjct: 61 ETTVRYAISDAGHTQFTTSTTDLAVQGNGFFVVSNANNTQQYLTRAGSFVPDAQGNLVNA 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTT-ASMQINLNSSDPLPTVTPF 170 G L G P T + + ++I +T NL+ + P Sbjct: 121 AGYYLLGQPGKVTNFSQNSLSGMQIVNIAQVSQVPVPSTAGTLTTGNLDPKAAVIAGPP- 179 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT----GDNNWQVYTQDSSDPNSIAKTAT 226 SY+ K S+ +++ G A + VY T G + WQ+ +S+ S+ T Sbjct: 180 ---GPASYSSKSSIVAYNNIGQAVTLDVYMSHTATAAGSDTWQIQAYNSATGTSVGAATT 236 Query: 227 TLEFN---ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 G L + T A S TG + T NG Sbjct: 237 FTFDTTATGKGALAAASPTTLSFTVPGGAAVTMDLSNM------TQTGTDFSFKATVNGS 290 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 P + ++D G V N Q L I+LA+ + + L E NV+S +SG A Sbjct: 291 APAAIDKVDVDDAGHVTAILKNGQQMTLYTIMLADVPSPDNLTPEPGNVYSTNMNSGNAQ 350 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G AGTG GT+ +GALE SNVDL+ EL MI AQR + +N+++ +T +L+ +VNL+ Sbjct: 351 AGNAGTGGLGTIQSGALEDSNVDLADELTGMIEAQRGFTANSKSFQTGADLLDVVVNLK 409 >UniRef50_A7HW68 Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW68_PARL1 Length = 454 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 112/454 (24%), Positives = 185/454 (40%), Gaps = 59/454 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK----VGLGVKVAGI 57 + + A++G+ A ++ L I +NIANS T GFK +F D+ S + V A Sbjct: 6 SMTTAITGIRAQSSALGHISDNIANSQTIGFKRTDTNFQDIVTASTSRNHLPGAVLAAPS 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDS----------NGSVFYSRNGQFKLDENRN 107 + G+ + +AI+ +GFF + + +Y+R G F +D+ Sbjct: 66 FTNNVQGSIDASEVPTHMAINGSGFFVVSARVATVDGNPVFDNVNYYTRRGDFSMDKYGY 125 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 LVN G L G G P+ I I +AA+TT+T S + NL + Sbjct: 126 LVNGGGYTLQGLAIDPVTGN-PVGDTPSRIQINRDFLAARTTSTISYKANLPAWPKTVNA 184 Query: 168 TPFSASNA--------------------------DSYNKKGSVTVFDSQGNAHDMSVYFV 201 P A++ D+ G+VT +D G ++ + Sbjct: 185 DPAIANSELLTVGRFTPALADLSVISAANEDIFLDNSLSGGAVTGYDELGAPANVQFRWA 244 Query: 202 K-----TGDNNWQVYTQDSSDPNSIAK----TATTLEFNANGTLVDGAMANNIATGAING 252 K G + W ++ + S F+ G L + I +NG Sbjct: 245 KIDNEDGGGDTWNLFYKTSDSATGATDKWVNVGQDYAFDGQGRLTPAVDSTTITGLTVNG 304 Query: 253 AEPATFSLSFLNSMQQ----NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 +L S + G QNGY G+LVS ++++G + G YSN +T Sbjct: 305 VSLGNVTLDHGASNVTQFEDDNGTVKTTELDQNGYPSGELVSIAVSENGRITGTYSNGKT 364 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 L Q+ LA F ++ L ++ATQ SG +LG G + A EASNVD++ Sbjct: 365 VDLAQVSLATFNASDKLKKLDGTAFAATQESGEPMLG-----GGGDIIASAREASNVDIA 419 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E +IV Q+ Y + + + T D+++ +N++ Sbjct: 420 DEFSKLIVTQQAYTAGTRIVTTADELIRETLNMK 453 >UniRef50_C5SMJ1 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMJ1_9CAUL Length = 472 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 115/466 (24%), Positives = 179/466 (38%), Gaps = 65/466 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGI---- 57 + V+GL A + L I NNIANS T +K F + S G G+ Sbjct: 6 SMQAGVAGLAANSNALSAISNNIANSTTTAYKRVRTDFQSIVTASSTPTGYNAGGVISTT 65 Query: 58 -TQDFTDGTTTNTGRGLDVAISQNGFFRLVD-----SNGSVFYSRNGQFKLDENRNLVNM 111 T GT LD+ I GFF + + ++R+G F DE+ L N Sbjct: 66 RHMISTLGTLQKASSQLDLGIDGQGFFITTQKSEPGAEDARLFTRDGSFFADEDGYLRNA 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPT---NISIPNTLMAAKTTTTASMQINLNSSDP----- 163 L L G+P T A+ + I++ N + TT A + NLN++ Sbjct: 126 SNLYLQGWPITAGGGPTLSAADLSQLRTINVENIAAQIEPTTFAEIVGNLNANQTISDRA 185 Query: 164 -------------LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-------- 202 + + + + + ++ V DSQG ++V +K Sbjct: 186 DEYAASPTTLPMATYDASAPDTTTSTRPDYEITIPVSDSQGGERRLTVSMIKLAADPTAT 245 Query: 203 --TGDNNWQVYTQDSSDPNSIAKTATT-----------LEFNANGTLVDGAMANNIATGA 249 N W +S AT L +N+ G L D + +TGA Sbjct: 246 PPIAANTWAYEVWSPDVKDSTISPATEASTNGIVSRGHLVYNSAGKLTDIVDSTGTSTGA 305 Query: 250 IN-------------GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDD 296 + A+ + + + +G L QI+ + Sbjct: 306 TSLNLSFNWNSAIGVAAQTVQVEFNGDQGGLTQLNSASTNRVDADGTPFSGLDKVQISKE 365 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G V + N T+ + Q+ LA F N +GL N ++ + SG L G G L Sbjct: 366 GLVTAVFKNGSTRDIAQLALATFVNADGLTPVSGNAYTVSNDSGPLTLKVPGVSGAGLLG 425 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G LEAS+VDLS+E N+IV QR Y +N++TI T D++L L+N++ Sbjct: 426 VGTLEASDVDLSEEFTNLIVTQRAYSANSRTITTADEMLQELLNIK 471 >UniRef50_C4ZAN8 Flagellar hook protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAN8_EUBR3 Length = 477 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 125/474 (26%), Positives = 197/474 (41%), Gaps = 74/474 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + AVSGL T +DVIGNNIAN T FK+ + F+++ + Sbjct: 4 SLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGASAGNGAAGTGG 63 Query: 47 ----KVGLGVKVAGITQDFT-DGTTTNTGRGLDVAISQNG---FFRLVDSNGSVFYSRNG 98 ++GLGVK + T G+ TG D+ ++ FF + D + ++R G Sbjct: 64 KNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGT-NRLFTRAG 122 Query: 99 QFKLDENRNL-VNMQGLQLTGYPATGTPPTI-QQGANPTNISIPNTLMAAKTTTTASMQI 156 F +D N L ++ G L G+ I ++ +S A + TT A + Sbjct: 123 DFYVDGNGYLCMSSTGYTLQGWQVDAKGTVIKDTVSSLQVMSSATKTSAPEATTKAYVSG 182 Query: 157 NLNSSD--------------------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAH-- 194 L+ +D +N D + DS+GN+ Sbjct: 183 VLDKNDAQAADTGRIITIGFFDDLGYNYTAKFGIKKTNTDGTYDVTLKDIVDSKGNSIFD 242 Query: 195 --DMSVYFVKTGDNNWQVYTQDS--SDPNSIAKTATTLEFNANGTLVDGAMAN------- 243 + G N +Y+ DP +I + A+ + + GT + AN Sbjct: 243 VDKDGNFITSQGPNGQTMYSYKGRAVDPQTIFEDASLVFDQSEGTFTSISSANSPAAKTI 302 Query: 244 -------NIATGAINGAEPATFSLSFL-------NSMQQNTGANNIVATTQNGYKPGDLV 289 N +ING+ + + F N G N + G G L Sbjct: 303 NLNLSVLNTQDASINGSNFSNIEVDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGALT 362 Query: 290 SYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL-LGTAG 348 ++DDG + G+Y N T LL QI +A FAN GL GDN + +T +SG +G Sbjct: 363 GITVSDDGKIYGSYDNGNTVLLCQIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGVEI 422 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + + G++++G LE SNVDLS + +MIV QR +Q+N++ I T D +L L+NL+ Sbjct: 423 SADGGSISSGELEMSNVDLSSQFTDMIVTQRGFQANSRVITTSDTLLEELINLK 476 >UniRef50_B1TBA9 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBA9_9BURK Length = 388 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 104/412 (25%), Positives = 166/412 (40%), Gaps = 41/412 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVKV 54 + +SGL A + L IG+N+AN T GFKS F D+ G + G GV Sbjct: 4 SIYIGMSGLAAYSKGLQTIGDNVANLNTPGFKSSAPRFQDLCDGRPTAREGKRSGSGVAY 63 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN-MQG 113 A T +F G + LD+AI +G L D + ++ Y+R GQF + ++ + G Sbjct: 64 AHATLNFRQGELRGSTGQLDLAIDGDGLLALRDGD-TIRYARTGQFHIADDGFVTERTSG 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLM-AAKTTTTASMQINLNSSDPLPTVTPFSA 172 L+L T+ IS+ + T NL Sbjct: 123 LKL---------ATLDATGTLAPISLAQRQLDPPCATRVVRFTDNL-------------- 159 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 S + V ++D+ G H + V F + + +D + TL+F+ Sbjct: 160 SPGSTDFSVSDVEIYDANGAKHVLKVSFAQDTGVMPGRWKVTVADRDGTPLQIGTLQFHG 219 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQN--TGANNIVATTQNGYKPGDLVS 290 + T +L F + + + + Q+GY G L S Sbjct: 220 -----GIPEPGQDRIDVTLPSSQLTVTLDFSEGVTAFSAGATSTLRMSKQDGYAAGMLAS 274 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 I+ DG + YSN Q G + LA FA+ + L G ++ A+ +G Sbjct: 275 MNIDGDGQLALRYSNGQIGHAGAVALARFADPQRLVRLGAGLFDASHLP-PPRYAKSGDP 333 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G L +GA+EASNVDLS E +I+ QR +Q+ +Q I T ++++ L +R Sbjct: 334 LVGQLRSGAVEASNVDLSGEFGQLILIQRGFQAASQVISTSNEMIMQLFQMR 385 >UniRef50_Q2CGG5 Flagellar hook protein FlgE, putative n=3 Tax=Rhodobacteraceae RepID=Q2CGG5_9RHOB Length = 432 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 109/437 (24%), Positives = 174/437 (39%), Gaps = 47/437 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A A ++ I NIAN+ T GF+ F+ M + I +D Sbjct: 6 AMKTGVSGLQANAASVANISENIANANTDGFRRS---FSQMVTTTTTNPSSMSGVIARDR 62 Query: 62 ----TDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-----FYSRNGQFKLDENRNLVNMQ 112 T G+ T D+A+ GFF + +R G F DEN NL N Sbjct: 63 IDMGTPGSMRPTDSATDLALEGGGFFVVSQRPDEPLASNYMLTRAGSFTPDENGNLKNAA 122 Query: 113 GLQLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 G L G+P T + + +++ + TTT ++ NL + + Sbjct: 123 GFYLAGFPTDQNGQTGGIDRTSFGDLSTVNVLERSIQGAPTTTIALSGNLPAQESGLATP 182 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 ++ Y F+ G A + + ++ + + N DPN T Sbjct: 183 GAPFISSAEY--------FNPLGGAERLELRWLPSMNKNEWTLEISGPDPNQPPYGWVTA 234 Query: 229 EFNANG------------------TLVDGAMANNIATGAINGAEPATFSLSFL-----NS 265 F +G NG P +L + Sbjct: 235 TFEDSGPNAGSPLTYQGMPNGGGANFAFNDATGQATLTIDNGNTPQVITLDLGAPGEFDG 294 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGL 325 M Q G ++G + G+L +I +DGTV G + N Q L + +AN +N EGL Sbjct: 295 MTQFAGDYTPPQIDRDGSEAGNLARVEIENDGTVFGFFDNGQRMSLFSLPVANVSNPEGL 354 Query: 326 ASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNA 385 + N + +++SG LG AG G ++ GALE SNVD+++EL ++I QR Y +NA Sbjct: 355 VAGNGNAYKLSRASGAMTLGIAGGGGTASIYAGALEGSNVDIAEELTDLIATQRAYSTNA 414 Query: 386 QTIKTQDQILNTLVNLR 402 + + T D++L+ ++ Sbjct: 415 KVVTTADEMLDETTRIK 431 >UniRef50_B8J3H7 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3H7_DESDA Length = 499 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 119/500 (23%), Positives = 192/500 (38%), Gaps = 104/500 (20%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +G+ A ++V NN+AN +T G+K F+D+F Sbjct: 4 SLYIGATGMKGLAEGMNVTTNNLANVSTIGYKQQGILFSDIFYAEQGGMGNWWNAQDNSR 63 Query: 46 ---SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 +VG+G++V + F G ++ D+AIS GFF++ D ++Y+R G F+ Sbjct: 64 VALGQVGMGLQVESVRTLFGQGALESSNTVTDMAISGKGFFQVTDGV-DLYYTRAGDFRP 122 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAA-KTTTTASMQINLNSS 161 D L GL L GY I+I K+TT+ M+ NL Sbjct: 123 DREGVLRTPSGLALNGYKYNADG----SKGGLQQITIDKFATMPSKSTTSVDMRFNLGLE 178 Query: 162 D--------------PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN- 206 + +Y S+T++ GN ++YF + Sbjct: 179 TPNSTDAANPYFSLLNTYDANASPPLSNLAYGYAQSITLYGENGNQQQATIYFDAAPSDR 238 Query: 207 -----------NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE- 254 ++ P + A TL F+A G L D A G+ + A+ Sbjct: 239 PGSVVQYLISTGNTPRDENGLAPGTGALMTGTLTFDAKGQLTDMTAFTPSAEGSKDLADW 298 Query: 255 ----------------------------------------------------PATFSLSF 262 +++ Sbjct: 299 APSALSDGGLPQMTVNGVATTVNLGISAAGGWQNAPANAAAVGASQNALGGMGQDATVAV 358 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 + + QNGY G L + I+ +G VVG +SN Q+ L QI + F + Sbjct: 359 DATTNYKGSSPVTRRNNQNGYPEGFLSNISISANGDVVGLFSNNQSMDLWQIPVCRFTSE 418 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 +GL EG N++SAT +G +G AGT N+GT+ +E SNVD++ E+ NMI+ QR +Q Sbjct: 419 DGLRREGHNMFSATADAGQMDMGEAGTENYGTIRAYNIENSNVDVATEMANMIITQRGFQ 478 Query: 383 SNAQTIKTQDQILNTLVNLR 402 SN++ + T DQ+L V L+ Sbjct: 479 SNSKVVTTADQMLQKAVELK 498 >UniRef50_C5RFU7 Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFU7_CLOCL Length = 474 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 110/470 (23%), Positives = 183/470 (38%), Gaps = 69/470 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 ++GL A T LDVIGNNIAN T FKS + F D Sbjct: 4 GMYSGITGLKANQTKLDVIGNNIANVGTTAFKSSSIRFTDSLYQNMTSASAPGYNLGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD---SNGSVF-------- 93 S VGLGVKV+ +T + T G NTG LD AI +GFF + G+ F Sbjct: 64 PSVVGLGVKVSAVTTNMTQGNLQNTGSNLDCAIDGDGFFMVATGPLPTGNEFGVTLDTLS 123 Query: 94 ------------YSRNGQFKLDENRNLVNMQGLQLTGYP--------------ATGTPPT 127 Y+R+G F LD + NL++ G ++ GYP A G Sbjct: 124 HSIINGNGMGVNYTRDGSFSLDADGNLLSNSGYRILGYPLQETGLGISSVDYAANGNCNF 183 Query: 128 IQQGANPTNISIPNTLMAAKTTTTASMQI--NLNSSDPLPTVTPFSASNADSYNKKGSVT 185 + + + +TL+ K ++ N + P + + + + K +T Sbjct: 184 VDANSPYGITAATDTLVPMKIPNKVAIAATRNTLDATGAPVGLAMTYTGSSTTTDKPDIT 243 Query: 186 VFDSQGN-----AHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGA 240 + ++ + ++F + + + + T+ Sbjct: 244 INNADNTYVGDTDVTIKIFFNDKYQDTTVTPPMTTPRYVISINGSDAVAVADADTINIKM 303 Query: 241 MANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVV 300 + T + A N T N + ++ I +G + Sbjct: 304 ADGSTKTLSQLDIVLNNAPTDPATPADIQAAAKNSWQFTVNADGEKAIKNFNIEKNGVIK 363 Query: 301 GNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL--------GTAGTGNF 352 G + + +LGQ+ ++ F N GL G+N+++ + +SG ++ + F Sbjct: 364 GVLQDGRVTVLGQLAMSTFKNTVGLQKLGNNLYNVSANSGEPIIRSSVGTEKDRSNEDAF 423 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G+ NG +E SNVDL+++ MIVA R +Q+N++ I T D+IL LV L+ Sbjct: 424 GSCVNGVVEMSNVDLAEQFTEMIVASRAFQANSKIITTSDEILQELVQLK 473 >UniRef50_Q0G073 Flagellar hook protein E n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G073_9RHIZ Length = 390 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 117/410 (28%), Positives = 175/410 (42%), Gaps = 37/410 (9%) Query: 3 FSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----KVGLGVKVAGI 57 F +VSG+NA + L + +NIANSAT G+K F+ + S V Sbjct: 7 FRTSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSGGRGNYTSGSVLSQTR 66 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL-----DENRNLVNMQ 112 T G T T D+AIS +GFF + D NG F++R G F LVN Sbjct: 67 YDISTQGLVTTTSSKTDLAISGDGFFVVEDQNGQPFFTRAGSFVQRTEPDTGETFLVNAA 126 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G +LTG P + ++A + TTT+ + + L + Sbjct: 127 GYKLTGQ---NGPVQVPV----------GEIVAPQATTTSELSMQLPLNGT--------- 164 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 GS T F+S+G A ++S+ +TG + W + S + + T Sbjct: 165 -----GTHTGSFTAFNSRGEAVNVSMTATRTGADQWDLTFDAPSASAPVTVSVTFDAATG 219 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 N NG A +++ + A NG + Sbjct: 220 LPNPPITTAGNLQIVPPANGGGGAPSTVALNLGQLTSYDAAFTFQAEANGNPATGFSDFT 279 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 I+DDG V G + + L +I LA F + + L NV+ +Q SG G +G F Sbjct: 280 ISDDGRVFGILTTGRQIELDRIQLARFQSPDQLDVISGNVFRPSQLSGDPQFGFSGELGF 339 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G L +GALE SNVDL+ EL +MIV QR+Y +N++T +T ++L+ LVNL+ Sbjct: 340 GDLISGALEESNVDLASELTDMIVTQRSYAANSKTFQTGSEMLDLLVNLK 389 >UniRef50_A8TLX3 Flagellar basal body FlaE domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLX3_9PROT Length = 433 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 105/439 (23%), Positives = 173/439 (39%), Gaps = 50/439 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----KVGLGVKVAG 56 VS L A + +I +NIAN T G+K TA F + S GV Sbjct: 6 GMFSGVSALAAQSQAFGIISDNIANVNTIGYKDTTARFQTLVTESSSSSRYSPGGVLARP 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLV------DSNGSVFYSRNGQFKLDENRNLVN 110 G T D+++ +GFF + S G +R G F DE NLVN Sbjct: 66 FVNPEKQGLLQGTTSNTDISLVGDGFFIVNENDDPLTSGGEYLLTRAGSFTEDEEGNLVN 125 Query: 111 MQGLQLTGYPATGTPPTIQQG-----ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 G L G+ T + ++ +++ + ++TA++ +NL ++ Sbjct: 126 AAGFFLQGWRTDSTGTIVNSNTKDQLSSLETVNLAGFTSVSNPSSTANLAVNLPANATTA 185 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT- 224 + ++T+FDS G H M++ + K N Y+ D ++ Sbjct: 186 STQT------------TNLTIFDSLGVEHLMTINWTKNAQANEWAYSLDVTNQAGTTTAA 233 Query: 225 ------------ATTLEFNANGTLVDGAMANNIATGAINGAEPATF---------SLSFL 263 T + + GTLVDG A ++ Sbjct: 234 IVAGTIDFDPADGTIEDIDNGGTLVDGDTAQTTLPITALAFGSGAAASSIVINWGTVGQT 293 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 N M Q +G+ QNG P L + +I+++G V + N T+ + +I + Sbjct: 294 NGMSQLSGSYEATLLNQNGSSPSALTAVEIDNEGVVTARFKNGDTRPIYKIAIGTVPAAT 353 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 L SE N + + SG LL AG G + + ALE S VDLS E ++I+ QR Y + Sbjct: 354 ELRSENGNAYKLSSRSGDLLLTEAGLQGAGAIESSALEQSTVDLSDEFTDLIITQRAYSA 413 Query: 384 NAQTIKTQDQILNTLVNLR 402 + I T D++L+ ++ ++ Sbjct: 414 ATKLITTGDELLDEIIRVK 432 >UniRef50_Q6LW64 Hypothetical flagellar hook protein FlgE n=1 Tax=Photobacterium profundum RepID=Q6LW64_PHOPR Length = 472 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 130/472 (27%), Positives = 193/472 (40%), Gaps = 74/472 (15%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG---LGVKVAGI 57 M+ + +SGL A + ++ I +NIAN T G+KS F D++A G GV+VA I Sbjct: 1 MSMNIGMSGLIATSEQMNSISHNIANVGTAGYKSSRTEFQDIYAPEFGGGEMNGVEVAAI 60 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV-------- 109 Q F +GTTT TGR D+AI+ GFF + + G ++RNG F LD++ NLV Sbjct: 61 RQSFKNGTTTPTGRNGDLAINGEGFFMVENK-GQQMFTRNGVFNLDKDGNLVASDGSHLQ 119 Query: 110 ----NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTAS----MQINLNSS 161 G TG T T A + + A + + ++ Sbjct: 120 GYGVTGTGQIQTGTITDLTVETGDMPARSSTKVNMEVNLDANSLAIVPKTPFDPEDPSTF 179 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAH--------------------------- 194 T T + + A+ + V D+ + H Sbjct: 180 TSSATTTVYDSLGAEHEVTQYYVKTADNAWDVHYLIDDEKTATKTASMAFDSEGKLSAIY 239 Query: 195 -----DMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGT-------------- 235 ++ Y + V +D A + +A T Sbjct: 240 DPANPVVATYLNASTKAREAVAASTVADAALAANPTDKVLIDAAATAKVAAKTATDAAAL 299 Query: 236 -------LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 + +A ++A NG+ T Q I +Q+G+ PG + Sbjct: 300 AKVSADPIAAATVAVDLAFTPNNGSANQTIKFDVA-ETTQFGKEFAITKNSQDGHAPGQV 358 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 + DG V YSN QT++ GQ+ LA F N EGL G+ W+ + SSG AL+G AG Sbjct: 359 AGWYFEGDGRVFARYSNGQTKVQGQVSLARFPNQEGLQQAGNTRWTQSFSSGAALVGAAG 418 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 TG G + G E SNVDLS E+VN++ AQ NYQ+NA+TIK ++ L Sbjct: 419 TGQLGNVRTGMYENSNVDLSSEMVNLMSAQSNYQANAKTIKVAQEMTQILFQ 470 >UniRef50_D0XNJ6 Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XNJ6_9CAUL Length = 478 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 112/472 (23%), Positives = 186/472 (39%), Gaps = 71/472 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A + L I NIAN T G+K A F+ + G G G+ + Sbjct: 6 ALLAGVSGLTANSAALAAISQNIANVNTVGYKRTAAEFSTVVNSQSQGAGYSAGGVLANT 65 Query: 62 TD-----GTTTNTGRGLDVAISQNGFFRLV------DSNGSVFYSRNGQFKLDENRNLVN 110 + G T D+ I+ GFF D+ + ++R G F++D L N Sbjct: 66 RNYIAQGGQLQRTTSSTDLGIAGQGFFVTTEKAEGLDAGDARLFTRAGAFRVDNFGYLKN 125 Query: 111 MQGLQLTGYPATGTPPTIQQG---ANPTNISIPNTLMAAKTTTTASMQINLNSSDPL--- 164 GL L G+P T+I++ + A+ TT A + NL SS + Sbjct: 126 TAGLYLQGWPVNAEGDIPTDPSDLGKLTSINVGSVGGTAEATTRAQVNANLKSSQAVSAD 185 Query: 165 ----------PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQV--- 210 + + + + +V V DS+G ++ F+KT N WQ Sbjct: 186 IATYSTATKSMSTYNATTGTGFKPDFQITVPVSDSKGGQRTVAYSFLKTANPNEWQTEVH 245 Query: 211 -----YTQDSSDPNSIAKTATTLEFNANGTLVDGA--MANNIATGAINGAEPATFSLSFL 263 + + P++ + + F +G L A G++ A+P+ S++ Sbjct: 246 VIPASDIDNGTTPSNGILKSGLVLFTQDGRLDVDAMKARETATPGSMLFADPSVASITLG 305 Query: 264 ---------------------------------NSMQQNTGANNIVATTQNGYKPGDLVS 290 + Q + + A NG G+L + Sbjct: 306 ASDAAAGTAAAPKWKTSLGIDNQNVSFDLTASAGGLTQYDSDSIVQAVVTNGTAFGNLSN 365 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 +I+++G V + N T+ + Q+ LA F + + L N + +Q SG L T G G Sbjct: 366 IEIDEEGYVTAIFDNGVTRRIAQVALATFTSADSLTPASGNAYRVSQGSGTFNLKTPGAG 425 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + LEAS VDLS E +I QR Y ++++ I T D++L L++++ Sbjct: 426 GAGLIGASQLEASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAELISIK 477 >UniRef50_A3UFN4 Flagellar hook protein n=2 Tax=Hyphomonadaceae RepID=A3UFN4_9RHOB Length = 465 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 103/459 (22%), Positives = 183/459 (39%), Gaps = 58/459 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG------LGVKVA 55 A + SGL A ++ L I +NIAN T G+K F + G GV Sbjct: 6 AMAAGASGLIANSSALAAISDNIANVNTVGYKRVDTIFTPNYKIGGGGETRYASSGVSSN 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLV------DSNGSVFYSRNGQFKLDENRNLV 109 + G T D+AI +GFF + S+ +V ++R+G F+ D + L Sbjct: 66 SRLDVNSSGLLTPGVSATDMAIDGDGFFVVRPSPTAGGSSDAVLFTRSGGFQTDSSGYLR 125 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNI---SIPNTLMAAKTTTTASMQINLNSS----- 161 N G+ L +P Q +N + ++ N A T++ + NL +S Sbjct: 126 NDAGMYLYAWPVQADGTVNQNPSNVDTLEAVNLSNIGGTANATSSVRINANLQASTTPSA 185 Query: 162 ----DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK--TGDNNWQVYTQDS 215 AS + + + ++ ++D+QG +++ F+K T N W V Sbjct: 186 AAATYDPTASGTNMASGTVTPDFERTIQIYDTQGGVRSVTMSFLKHATNANQWHVELHVQ 245 Query: 216 SDPNSIAKTA--------TTLEFNANGTLVDGAMANNIATGAINGAEPATF--------- 258 + + F+ NG +V GA + ++ A Sbjct: 246 PASDVTTGAPLIDGQIATGIVAFDTNGEIVPGAPTTLPTSLPFEASDAAGAVGAGAVRWA 305 Query: 259 ---------------SLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 + + Q +N+ +T +G G +++DDG + + Sbjct: 306 ASTGVGAQTISLDLGTAGTPGGITQFNSPSNLDSTVVDGAIFGAFAGVEVSDDGFLSARF 365 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 +N + + Q+ +A N GLAS G + T+ SG L G+G GT+ +E S Sbjct: 366 TNGVVRRVYQLPVATVFNPNGLASVGGASFQITEDSGAFTLNAPGSGASGTIAAKTVENS 425 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NVD++ E N+I+ QR Y ++++ I T D++L + ++ Sbjct: 426 NVDIATEFSNLIITQRAYSASSRIITTADEMLAEAIQMK 464 >UniRef50_C6NWL1 Flagellar hook protein flgE n=2 Tax=Proteobacteria RepID=C6NWL1_9GAMM Length = 419 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 149/422 (35%), Positives = 224/422 (53%), Gaps = 27/422 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF---------AGSKVGLGV 52 AFS A+SGL AA T+L V+GNNI+N+ T GFKS A FAD + +VG+G Sbjct: 3 AFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGIGT 62 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 +V + Q FT G T LDVAI+ NGFF+L + NG + YSRNGQF+L+ +V+ Sbjct: 63 RVMTVAQQFTQGNIQTTNNPLDVAINGNGFFQL-NYNGDIVYSRNGQFQLNSGGVIVDGN 121 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G +L G A T G +++ + + ++ ++ +NLNS++ + F+ Sbjct: 122 GAELLGIQAQNGKLTGATG----PLTVSQNALPPQASSGITLALNLNSTNQNLSGAAFNI 177 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN------------- 219 ++ ++YN S T++DS G ++ Y+ N Sbjct: 178 NDPNTYNYSTSNTIYDSLGTPQLVTTYYQLVSGGTGSTTATSGETWNVYYSATGTTGSGG 237 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 + + L F++ G LV G N ++ + N +V+ T Sbjct: 238 ITSGSLGQLVFSSTGQLVSGGPFNVNPPLNWQDGAQSSTLNVSYSGSTNYNAPNAVVSAT 297 Query: 280 QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSS 339 NGY G L I+ G + YSN Q+Q+LGQI L FANN GL + G+N W+++ SS Sbjct: 298 TNGYGVGQLTGLSIDPGGNIYARYSNGQSQVLGQIALTRFANNNGLQNLGNNYWASSYSS 357 Query: 340 GVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLV 399 G+ L G G+ N G L +GA+E SNV+LS++LVN+IVAQ+ YQ+NAQTIKTQ+ ++ TL+ Sbjct: 358 GLPLSGAPGSTNLGVLQSGAVEQSNVNLSQDLVNLIVAQQAYQANAQTIKTQNTVVQTLL 417 Query: 400 NL 401 +L Sbjct: 418 SL 419 >UniRef50_A9DSB3 Flagellar hook protein FlgE n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSB3_9RHOB Length = 422 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 101/425 (23%), Positives = 178/425 (41%), Gaps = 33/425 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A ++ + I +NIAN+ T G++ + F GS GV Sbjct: 6 ALQIGVSGLQANSSRVQNISSNIANANTVGYRRTFSEFVTQNTGSTQA-GVLTDVRANIS 64 Query: 62 TDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-----FYSRNGQFKLDENRNLVNMQGLQL 116 T+G T D+A+ +GFF + + + +R G F D+N +L N G L Sbjct: 65 TNGNIVGTNSTTDLAVQGDGFFVVSRNANDPIESNYYLTRAGSFTPDQNGDLRNSAGYFL 124 Query: 117 TGYPATGTPPTIQQG----ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 +G+P T + + ++I + + +++ + N+ + + P T + Sbjct: 125 SGFPTDAAGNTGSVSSTSYNDLSTVNIASYQVQGTPSSSVGVSGNVPAQETGPGTTGTAF 184 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNA 232 + Y + G + +++ + +N + + + Sbjct: 185 ESTLRY--------VNQLGGSDALTLSWTPGAVDNEWTVSITDEAGTNYGDATVNFTDSG 236 Query: 233 ----------NGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVA 277 GTL + NG P + F M Q +G A Sbjct: 237 ADAGSPASYTPGTLPIDPATGVVTLSITNGGTPQALEIDFGAPGTFGGMTQFSGDYTPPA 296 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 T +G + G L +++D G + G + N Q + L Q+ LAN AN + + S N + AT+ Sbjct: 297 FTDDGTETGSLERAEMSDSGVLFGVFDNGQRRALFQVPLANVANPDQMRSVDGNAYVATR 356 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 SG LG G++ + ALE SNVD+++EL ++I QR Y S+A+ I T D++L+ Sbjct: 357 DSGAVSLGNPMLNGLGSINSNALEGSNVDIAQELTDLIQTQRAYSSSAKIITTSDEMLSE 416 Query: 398 LVNLR 402 +N++ Sbjct: 417 TLNIK 421 >UniRef50_A0NPJ1 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NPJ1_9RHOB Length = 463 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 116/462 (25%), Positives = 192/462 (41%), Gaps = 68/462 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKVA 55 A + AVSGL A A L+ I N+ANS T G+K +F+D+ +G +V Sbjct: 6 AINSAVSGLAAQAKALENISGNVANSQTTGYKRLDTTFSDLVSGGGSKQAQQVSGTTFAT 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------SVFYSRNGQFKLDEN 105 + G T+ +AI+ G+F + ++ +Y+R G F+ D+ Sbjct: 66 SRATNTVQGDITSVDVDTYMAINGPGYFVVTKASDVVDGSTTFADETYYTRAGDFERDKE 125 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 L+N G L G+P G NPT I I N +AA TT Q NL Sbjct: 126 GYLINSSGYYLQGFPLDPNTGN-AIGDNPTVIQIENQPLAASATTAVDYQANLPRVPATN 184 Query: 166 TVTPFSASNA--------------------DSYNKKGSVTVFDSQGNAHDMSVYFVKTGD 205 S A +S GS+T+++ G A + V + KT + Sbjct: 185 DYDGTDESTALLNATVGAGNVAVANEADFLNSSISGGSITIYNQNGTAMPVEVRYAKTAN 244 Query: 206 ---------NNWQVYTQDSSDPNSIAKTATTLEFNANG---TLVDGAMANNIATGAINGA 253 + W +Y D T++F+ G TL GAMA + G+ +G Sbjct: 245 YDAGPPVVEDAWTMYIGTGGDATDAWYDVGTIQFDDTGEMTTLTAGAMAGSAVNGSGDGF 304 Query: 254 EPATFSLSF-----------LNSMQQN---TGANNIVATTQNGYKPGDLVSYQINDDGTV 299 ++ ++ S+ Q G + V+ Q+G+ G+L ++ G V Sbjct: 305 TISSLTIGGTTAANVEFSFADGSLTQYSDKDGRASSVSLDQDGFPAGELTGVAVDASGRV 364 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 + +YSN Q + + QI LA F + L ++AT SG A L G + Sbjct: 365 IASYSNNQQRPVYQIPLATFQAEQDLQRVDGAAFAATAGSGDADL-----SGGGQILAKK 419 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +E SN D++ E +I+ Q+ Y +N++ + + D++L+ +N+ Sbjct: 420 VELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDDALNM 461 >UniRef50_D0XTV6 Flagellar basal body FlaE domain protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTV6_9CAUL Length = 425 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 114/429 (26%), Positives = 182/429 (42%), Gaps = 42/429 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A S AVSGL A + L I NIANS+T +K+ F + +G K A + Sbjct: 6 ALSTAVSGLTAQSRALSAISENIANSSTTAYKTTDVYFQALVSGGKGSSTSTSAVTAKSS 65 Query: 62 T----DGTTTNTGRGLDVAISQNGFFRL-VDSNG---SVFYSRNGQFKLDENRNLVNMQG 113 GT T+T +VAI GFF + D G Y+RNG F+ + + L+N +G Sbjct: 66 QAMSVQGTVTSTSVATNVAIQDAGFFVVTSDPAGAASEDMYTRNGSFETNADGYLINTEG 125 Query: 114 LQLTGYPATGTPPTIQQGANPTN----ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 L G+P + N I++ + AK TT M N+ + + Sbjct: 126 FYLMGWPTDAEGNVLASNTNDLTGLSAINLSSIGGTAKATTEIEMSANVPADAAVGAALT 185 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS-------SDPNSIA 222 S+ + DS G +H + + KT DN W++ D + +I Sbjct: 186 ------------TSMQMIDSLGVSHTVGQTWTKTADNTWELTLSDPVLTSDGTTQSGTIN 233 Query: 223 KTATTLEFNANGTLVDGAMANNIA-TGAINGAEPATFSLS-----FLNSMQQNTGANNIV 276 T+ FN +G+L A + TG +GA + SL + + Q ++ + Sbjct: 234 GGPYTVVFNTDGSLGSVTPALDFTVTGFSSGAADSAVSLDIGEVGGTDGVTQYASTSSTI 293 Query: 277 -----ATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 T Q+G G+L I+ DG V N+ N + + QI +A F+N GL Sbjct: 294 GLEDVQTEQDGALYGELSGISIDSDGLVTANFDNGISLAIYQIPIATFSNPNGLTLVSGT 353 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 + ++G L G G G+L ALE S D++ E MI+AQ+ Y + +Q + + Sbjct: 354 TYDENSAAGQVHLNLPGEGGAGSLVASALEGSTTDIATEFNKMIIAQQAYSAASQVVSSA 413 Query: 392 DQILNTLVN 400 + ++L+ Sbjct: 414 SDMFDSLIQ 422 >UniRef50_A4U4J9 Flagellar hook protein FlgE n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4J9_9PROT Length = 430 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 107/435 (24%), Positives = 191/435 (43%), Gaps = 51/435 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL-----GVKVAG 56 A + AV+ L A +T L +I +N++NS+T G+K+ T SF + S GV + Sbjct: 6 AMNSAVTALKAQSTALSIISDNLSNSSTTGYKANTTSFKTLVTQSYSSTSYASGGVTASV 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLV--DSNGSVFYSRNGQFKLDENRNLVNMQGL 114 G + T D+A+ +GFF + + F++R+G+F++D + Sbjct: 66 RQNVAAQGVISGTSNSTDLALDGDGFFVVSYGATGEETFFTRDGEFEIDSAGFMCLGN-Y 124 Query: 115 QLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 L G+ + I + + +++ A+ T+ ++Q NL + V Sbjct: 125 YLQGWETDSSGNVIAGSTNSSSTLSAVNVNRFTGTAEATSAETIQANLPADAATGDVVT- 183 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS-------SDPNSIAK 223 ++ VFD+ G +H +++ + KT N W++ D +D I Sbjct: 184 -----------ATMEVFDALGVSHTVTMSYEKTAANEWELSLSDPVLSSDTATDSGDITG 232 Query: 224 TATTLEFNANGTLVDGAMANNIAT--------GAINGAEPATFSLS------FLNSMQQN 269 TL F G L A +AT + ++ AT ++ S+ Q Sbjct: 233 GPFTLTFAD-GALTSITDAGGVATELEFSITGFSTGASDIATIAIDVGQGTSGTGSLTQF 291 Query: 270 TGAN-----NIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 + + +I + T +G + G L S +++ G + ++ N Q + ++ +A+F N G Sbjct: 292 SSNSDDPDISITSITGDGVEYGALSSVEVDKKGVIWAHFDNGQDIAIYKLAVADFTNANG 351 Query: 325 LASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 L ++G V+ T +SG L AG T+T ALE+S VD S E MIVAQ+ Y + Sbjct: 352 LENQGYGVYQQTSASGDFTLHEAGEDGVATITPSALESSTVDTSDEFTRMIVAQQAYSAA 411 Query: 385 AQTIKTQDQILNTLV 399 +Q I T + + L+ Sbjct: 412 SQVISTASDMFDDLM 426 >UniRef50_D1U447 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U447_9DELT Length = 535 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 115/530 (21%), Positives = 195/530 (36%), Gaps = 129/530 (24%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +G+ A + V+ NN+AN +T GFK A F D+ + Sbjct: 5 SLYVGATGVVAHGERMQVVANNLANVSTIGFKKADALFGDLMSSQLGYGGGQFESGSSYA 64 Query: 46 SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-----GSVFYSRNGQF 100 S++G GV ++ I F +G NT D+AI+ NGFF + D+ G+ Y+R G F Sbjct: 65 SQMGQGVSMSAIRTVFAEGGLENTTTTTDLAITGNGFFGVRDTTAGGTMGASHYTRAGSF 124 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLM----------AAKTTT 150 + + + LV+ +L GY + + + + ++ + TT Sbjct: 125 RFNNDAYLVDPHDFRLQGYAVDRETGVVATQVSDVQLPYEDVVIDGQPVRLVRSQPRATT 184 Query: 151 TASMQINLNSSDPLPTVTPFSASNA----------------DSYNKKGSVTVFDSQGNAH 194 M NL++ + + A + ++T++D+ GN H Sbjct: 185 DVEMVTNLDAVATEQYSSATNPFFAMLEAYNGSSGSKPFGENLPAYSSALTIYDADGNEH 244 Query: 195 DMSVYFVKT----------GDNNWQVYTQDSSDPNSIAKTA---------TTLEFNANGT 235 +M+VYF G + W+ + L FN +G Sbjct: 245 EMTVYFDPVNASSLSNAAPGYSYWEYLVALPGSSDGSGAYGTSAAGLAGMGVLTFNGSGQ 304 Query: 236 LVDGAM----------------------------ANNIATGAINGAEPATFSLSFLNSMQ 267 LV + + + S F + Sbjct: 305 LVGQSAYSLTGGADGKNLSNWAPATFNLDGEPQVSFTFGSNGAAIGTEQLVSYDFGLTST 364 Query: 268 QNTGANNIVATTQNGYKPGDLV-----------------------------------SYQ 292 +T + G G+LV + Sbjct: 365 TSTWLSGAATAAGVGLNVGNLVQMANEARDARITTSYDQSSFTAYQIQDGFTWGYLLNTS 424 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 ++ DG + G +SN QT+ Q+ FA+ GL +G N + AT +SG A+ G A G Sbjct: 425 VDGDGFLSGYFSNGQTEEFYQVANYRFASEWGLRRDGGNNFVATDASGAAMDGKALVGGR 484 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G+ LE SNVD+++E +MI+ QR YQ+N + I T D +LNTL++++ Sbjct: 485 GSFVQNTLEMSNVDMAEEFASMIITQRGYQANTKVITTSDSLLNTLISVK 534 >UniRef50_C7M216 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M216_ACIFD Length = 431 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 123/442 (27%), Positives = 187/442 (42%), Gaps = 57/442 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + S A+SG+ A LD I NNIAN+ T G++S FAD+ + Sbjct: 4 SLSSAISGIEANQEWLDNIANNIANANTTGYQSTQTEFADLLYQQQSAAGGPVPGQTGGT 63 Query: 48 ----VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 VG GV+V+ DF+ GT TG DVAI GF + + G +Y+R+G +LD Sbjct: 64 NPLVVGSGVRVSATPTDFSQGTIVQTGTSTDVAIQGQGFLVV-NQGGQNYYTRDGALQLD 122 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 LV G + G+ Q + T+T ++ NL + Sbjct: 123 GAGQLVTASGALVMGWVPNAAGQVNQNAPLAALTIPQGQVAQPVATSTITLGGNLPAGSS 182 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 P V T +D GN + + F + N T +++ P + + Sbjct: 183 NPVVVT--------------TTGYDDLGNPVPIQLTFTPSTTANQWTLTAETTPPGATSP 228 Query: 224 TA--------TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS---------- 265 A T+ F+ + + A S Sbjct: 229 VALTVGGASSQTVTFDPATGQISAISGTSTANPDQLALGGFPTSYDLPAGYAMNLDFPTP 288 Query: 266 ------MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 Q + T QNGY G L + I DG + G Y+N +TQ+LGQI LA F Sbjct: 289 GTAQAVTQFAASSPTAQVTNQNGYPSGALAGFTIGSDGVIEGTYANGRTQVLGQIALAQF 348 Query: 320 ANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQR 379 AN +GL+ +G+ +++AT +SG LG+ G G L GALE+SNV + EL N++VAQ Sbjct: 349 ANAQGLSKQGNLLYAATTNSGAPQLGSPGAAGLGQLVGGALESSNVSIGSELTNLVVAQT 408 Query: 380 NYQSNAQTIKTQDQILNTLVNL 401 +YQ+N + ++T +L +LV + Sbjct: 409 DYQANTKVVQTTATVLQSLVQM 430 >UniRef50_O67711 Flagellar hook protein flgE n=2 Tax=Aquificaceae RepID=FLGE_AQUAE Length = 482 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 106/483 (21%), Positives = 174/483 (36%), Gaps = 105/483 (21%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----------- 50 +F A++G++ + LDV +N+AN+ T GFK F DM + VGL Sbjct: 4 SFYNAITGMDVSRFALDVTSDNLANANTVGFKKSRPIFQDMVSQVVVGLNTTTGTVKTTT 63 Query: 51 ---GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENR 106 G V + +T G+ T D+AI F L D +Y+R+G+F+++ Sbjct: 64 FGAGAVVDSTQKVWTIGSFKQTEITTDLAIEGKALFILRDVLTNQTYYTRDGRFRINREG 123 Query: 107 NLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNSSDPLP 165 L+N GL + G+ + G +I + + A + NL+ P+ Sbjct: 124 YLINPNGLYVQGFKVNPVTGEV-TGTQLEDIRVETQIPPKATGEIYFNPPTNLDERAPII 182 Query: 166 T--VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY------------ 211 TPF+ ++ +YN + ++T++DS G +YFVKTG N W+VY Sbjct: 183 DQTTTPFNPLDSFTYNYRYTLTIYDSLGREVPADIYFVKTGTNQWKVYFLASLKERYINV 242 Query: 212 -TQDSSDPNSI---------AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS 261 D I A F+ T + + +TG + Sbjct: 243 DWNGDDDKTDIVFLDLFNDQVHIADNGTFSTLPTFASKTLEFDPSTGKLVYIPGGDIVQD 302 Query: 262 FLNSMQQNTGANNIVATTQNGYKPGDLVS------------------------------- 290 N + P D S Sbjct: 303 TANQKFYLEVDLTPESGPSEINDPNDTESYLNKLGAKLGSETNKIKIYVGEGILQNNVIQ 362 Query: 291 ------------YQINDDG----------------TVVGNYSNEQTQLLGQIVLANFANN 322 ++ DG VVG YSN +T ++ LA F + Sbjct: 363 NSYITQHAADFVVTMDQDGYARGELIDLYVLSEDGVVVGVYSNGETLPTYRLALAQFTDP 422 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 E L +G N++++ + + G + + +E SNVD++KE +N+I AQR YQ Sbjct: 423 EELVKKGSNLYASVK---TPTILLPG--GSNKIRSAVVEMSNVDIAKEFINLITAQRTYQ 477 Query: 383 SNA 385 Sbjct: 478 VTQ 480 >UniRef50_D1TF51 Flagellar hook protein (Fragment) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF51_9BURK Length = 378 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 136/381 (35%), Positives = 200/381 (52%), Gaps = 23/381 (6%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M++ +SGL+AA+ +LDVIGNNIAN+ T GFK GTA F+DM+A + ++G+GV Sbjct: 1 MSYQTGLSGLHAASNDLDVIGNNIANAHTVGFKQGTAVFSDMYANAMLGATNNQIGIGVA 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM-Q 112 + I +DF++GT T TG LD+ I NGFF L NG+ YSRNGQF+ D + N+++ Sbjct: 61 TSAIVRDFSEGTPTQTGNPLDLDIRGNGFFLLSQ-NGTPVYSRNGQFQQDSDGNIISSGN 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GL L GY A G + + + T+ + NLN+ D P VTPF Sbjct: 120 GLPLMGY-AEGPNGVVDTSRLVQLTTATVANLPPMPTSAIAWSFNLNAGDDTPKVTPFDP 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--DNNW---------QVYTQDSSDPNSI 221 +N SYN + T +DS+GN H +S+Y VK N W V + + S Sbjct: 179 TNNQSYNFATTATTYDSEGNQHQISIYLVKDPATPNQWSAYIAPQGSDVTVDNGTGAPSS 238 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 TL F+++G L + + + A P T ++ N+ Q +++ + Sbjct: 239 YTQIGTLTFDSSGRLTSSSSLSFEMSMTNGSASPQTIAIDLGNTTQYAATTDSVTRYHPD 298 Query: 282 GYKPGDLVS-YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 GY + DDGT+ Y+N +T ++GQ+ A FAN GL S+ N++ ATQ+SG Sbjct: 299 GYAAAAYNGTLSVADDGTITAGYTNGETLVIGQVATATFANPNGLESQSGNLFYATQASG 358 Query: 341 VALLGTAGTGNFGTLTNGALE 361 A +GT GT N G L G +E Sbjct: 359 SAQIGTPGTFNHGAL-QGFME 378 >UniRef50_Q07TK1 Flagellar basal body FlaE domain protein n=8 Tax=Bradyrhizobiaceae RepID=Q07TK1_RHOP5 Length = 421 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 119/425 (28%), Positives = 193/425 (45%), Gaps = 38/425 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG-----LGVKVAG 56 A S A+S LN+ + +L +I +NIANS T G+K+ +A F + S GV V Sbjct: 6 ALSSAISALNSQSQSLAMISDNIANSQTVGYKTTSALFDSLVTSSSSASSYSSGGVTVLS 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNMQGL 114 + + G T T D+ IS NGFF + + GS Y+R G F +D++ +VN G Sbjct: 66 KSNISSQGLLTTTTSSTDIGISGNGFFPVSTALNGGSTLYTRAGSFTIDDSGYMVNASGA 125 Query: 115 QLTGYPATGTPPTI--QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 L G+ + + I + TT ++ +NL + + Sbjct: 126 YLLGWRTDADGNVVGGTGSGDLVPIDTNIAATSGSATTETTVALNLPADAAVND------ 179 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ------VYTQDSSDPNSIAKTAT 226 S+ ++DS G A+ M + + KT DN W T DS+ A Sbjct: 180 ------TFTSSMPLYDSLGTANSMQITWEKTADNTWTASVANPTLTSDSTKTTGTASGTI 233 Query: 227 TLEFNANGTLVDGAMANNIA-TGAINGAEPATFSLSFL-----NSMQQNTGANNIVATT- 279 T+ FN++G+L + + +G GA +T +L + + Q + + A Sbjct: 234 TITFNSDGSLKSTSSPTAFSVSGWTTGAANSTITLDLGTIGGIDGLTQKSSGSTTPAIDL 293 Query: 280 ----QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSA 335 +G G L S + DDG V YSN T L +I +A FA + L + + +++A Sbjct: 294 TSIESDGSAYGKLSSVAVGDDGKVNATYSNGTTISLYKIPVATFAAPDQLQVKSNGLYAA 353 Query: 336 TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQIL 395 T SG A++ +G+ GT+ G LEAS D + E NMI AQ+ Y + +Q I +++ Sbjct: 354 TADSGTAIVQQSGSNGAGTIQGGKLEASTADTNTEFSNMISAQQAYSAASQVITAVNEMF 413 Query: 396 NTLVN 400 +TL++ Sbjct: 414 DTLIS 418 >UniRef50_C6C0P3 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0P3_DESAD Length = 528 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 124/523 (23%), Positives = 191/523 (36%), Gaps = 122/523 (23%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A +G+ + L IG N+AN T +KSG + + S Sbjct: 5 SMYTAATGVKSHGVLLQQIGANLANVNTTAYKSGDTFLETLASQSSGKANSGIVSGGIST 64 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLD 103 ++GLG +VA +F +G+ T D+AI GFFR+ D + + Y+R G F D Sbjct: 65 PGQIGLGTRVATTRINFKEGSFETTNSSTDIAIGGQGFFRVADPVSNASRYTRAGSFHFD 124 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPT----------NISIPNTLMAAKTTTTAS 153 +N LV+ L GY N I K T + + Sbjct: 125 KNGQLVDSHKNILQGYKIDDDGNIGSTSQNIVLPMKEETDTYGNKIMVVKSDPKGTDSVT 184 Query: 154 MQINLNSSDPLP---------------TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV 198 M+ NL+S T + AD Y S+ ++D GN HD+ V Sbjct: 185 MRTNLDSGAVDNSSSEDSPFFSLLQEWDGTKDTPLTADKYEYNSSIQIYDDNGNKHDLVV 244 Query: 199 YFVK-------TGDNNWQVYTQDSSDPNSIAKTA---------TTLEFNANGTLVDGAMA 242 YF K + +W+ ++ A T TL F+ +G L++ + Sbjct: 245 YFDKVINDGDSSDKRHWEYIVTVPPGEDASALTGTSGAGLVMAGTLTFSGDGALLNQSAF 304 Query: 243 NNIAT----------------------------GAINGAEPATFSLSFLNSMQQNTGANN 274 A GA A T SL + ++ Sbjct: 305 TLAAGSADGKDLANWEQATLNSNGQPTFSVTLSGASGTASAQTISLDMGITSGTDSWNTT 364 Query: 275 IVATTQNG-----------------------------------YKPGDLVSYQINDDGTV 299 V G + G L + + DG + Sbjct: 365 GVTAADIGSNASSLPGMVDGKLNALATTDYYGSSSTISQSQDGFGEGYLQNVSFSPDGIM 424 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 +SN + L Q+ L NF N GL EG N +SAT SG A+ G A G++ + + Sbjct: 425 SALFSNGMSAELYQVNLYNFKNEFGLRREGSNYFSATIDSGEAIQGVARKDGLGSVVSNS 484 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDL+ E MI+ QR +Q+N++ I T D ++NT + ++ Sbjct: 485 LETSNVDLADEFAYMILTQRGFQANSKGITTTDSMINTALGIK 527 >UniRef50_B7ATR6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATR6_9BACE Length = 420 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 182/420 (43%), Gaps = 35/420 (8%) Query: 17 LDVIGNNIANSATYGFKSGTASFADMFAGS-------------------KVGLGVKVAGI 57 +DVIGNNIAN T FKS + SF+++F + ++GLG V I Sbjct: 1 MDVIGNNIANVNTIAFKSSSVSFSEVFYQTTQVASGPNATTGKGGQNAKQIGLGTSVGSI 60 Query: 58 TQ-DFTDGTTTNTGRGLDVAISQNG--FFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 + T+G + T DV +S +G FF + SNG+ +++R G F D + LV G Sbjct: 61 STKVDTEGASQRTDNPFDVKLSGSGNSFFIVR-SNGNTYFTRAGDFTYDASGALVTQSGA 119 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMA-AKTTTTASMQINLNSSD-PLPTVTPFSA 172 + G+ ++ P + + TT + N+NSS + S Sbjct: 120 NVMGWVTNDQGEIVKDVVQPLYVKSDEFTYTMPEQTTNLKVSGNINSSSGNFAKGSGTSG 179 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQ----DSSDPNSIAKTATTL 228 ++ D + +++ +D+ G + ++ + N+ + + + Sbjct: 180 ADGDQKGETMTLSFYDNLGYRYQATIAVTQVDKYNYHTEVTGVTKEGKAADLTVTFDHDI 239 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQN-----TGANNIVATTQNGY 283 FN L+DG ++ T + + + + G Sbjct: 240 SFNPTTGLLDGTDSSLDFTITGGADADSFVKDTIAVDISNLKSIGDETKFEYIDVAGKGK 299 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G + S I DDG ++ +YSN T ++GQI +F N GL G N+++AT +SG Sbjct: 300 AVGKMSSVGIQDDGRIIASYSNGDTVVIGQIATQSFTNAAGLEKVGTNMYAATLNSGEFD 359 Query: 344 -LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G T G++ +G +E SNVDL+ E +MI QR +Q+N++ I D +L L+NL+ Sbjct: 360 GVGEDITSAGGSMVSGTIEMSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELINLK 419 >UniRef50_UPI0001BCD67A flagellar hook protein FlgE n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD67A Length = 524 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 126/522 (24%), Positives = 201/522 (38%), Gaps = 123/522 (23%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL + T +DVIGNNIAN T GFK+G +F DM + + Sbjct: 4 SLFSGVSGLKSHNTRMDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAASPGTTIGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRN------- 97 +VGLGV V GI F+DG+ +TG+ D+A++ N F + + +Y+RN Sbjct: 64 PKQVGLGVSVGGIDTIFSDGSVQSTGKNTDLALTGNALFVVKRGD-QTYYTRNGAFEFDA 122 Query: 98 -GQFKLDENR-----------------------NLVNMQGLQLTGYPATGTPPTIQQGAN 133 G + L + N+V G + + AN Sbjct: 123 KGNYVLPSSGLHVQGWMNKTTNNSKVSTEGAAENIVIDAGRIMGPEQTDTVSYSENLDAN 182 Query: 134 PTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD---------------SY 178 I+ + T T + P + S +D S Sbjct: 183 TPIITGYSFSDPRTTPPTPHARTTSGMYITASQAQPVTLSLSDGTKQTVTSGTYTIGRSM 242 Query: 179 NKKGSVTVFDSQGNAHDM----------SVYFVKTGDN-------NWQVYTQDSSDPNSI 221 K S +DS GN H+ +V + N W + + N+ Sbjct: 243 PKVTSFGYYDSSGNKHEGLLILEKADSRTVTYQDADGNSVTKRASTWIARVGNPTARNTG 302 Query: 222 AKTAT------TLEFNANGTLVDGA-------------------------------MANN 244 T T TL F+ NG L G A Sbjct: 303 GSTTTHTLSSATLAFDENGVLRAGVLGGTSPNLTHDTDSPVTPPAVPPAVSANSIENATF 362 Query: 245 IATGAINGAEPATFSLSFLNS---MQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 AT + + P + ++ F N+ + Q G + + A NGY G L S ++ G + G Sbjct: 363 TATHSNAVSSPQSITVQFANNESPLTQYAGYDTVKAAA-NGYASGSLASVSVDSTGVITG 421 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG-TLTNGAL 360 Y+N + QI +A F+N GL G +++ + +S ++ + G +T AL Sbjct: 422 TYTNGVRRAEAQIGVAKFSNPSGLTKIGGSLYQESNNSNSKVVRAQTVESTGAKITPSAL 481 Query: 361 EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E SNVD++ + +MI+ QR +QSN++ I D++L TL+N++ Sbjct: 482 EMSNVDIADQFSDMIITQRGFQSNSKVITVGDEMLETLINMK 523 >UniRef50_Q2RRL4 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRL4_RHORT Length = 442 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 111/438 (25%), Positives = 177/438 (40%), Gaps = 39/438 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL---GVKVAGIT 58 AF+ + + + L I N+AN T G+K +F + + S GVK Sbjct: 6 AFTNSSMAMITQSHALGQISTNVANINTTGYKQVDTNFKTLLSESTANFDFFGVKPVDYR 65 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFK-----------LDE 104 + G TGR LDVAI G F + D +G FY+R+G F + Sbjct: 66 RVSEQGGLLTTGRNLDVAIGGQGLFMVNQQADLSGETFYTRDGSFGARVAKETVGKVVAG 125 Query: 105 NRNLVNMQGLQLTGYPATGT---------------PPTIQQGANPTNISIPNTLMA-AKT 148 N L G + G+ A TI + I + A + Sbjct: 126 NSYLSTQDGYYVMGWAADQAAVQAGTEPFPVNDTKTGTITGARALSPIQLNTRAEADGQA 185 Query: 149 TTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--N 206 TT A ++ N+N+ + T S ++S+ F N Sbjct: 186 TTAAVVRANINALATTTQSLGIPVWGPEVTTTAADGTT-SSTWPRQNVSLEFTPVAGTQN 244 Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 +W V D + + T + FN +GTL+ T ++ +++ Sbjct: 245 SWTVAVSDPNGGTTGTATPAQVTFNGDGTLLSPDDGQLAVAVTYANGTTGTIAVDI-DAL 303 Query: 267 QQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLA 326 Q +GA I NGYK G L+S I+ G + G YSN QT L ++ L +F N+ L Sbjct: 304 TQVSGATQIRNLDTNGYKEGSLISTNIDASGVLSGTYSNGQTLPLYKLALTDFQANDHLE 363 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFG--TLTNGALEASNVDLSKELVNMIVAQRNYQSN 384 + G N++ A+ ++G + + +A + T+T+GALE S VDL + MI Q Y S+ Sbjct: 364 AIGKNLYRASDAAGESRIFSADSAASVGTTVTSGALEQSTVDLGDQFSKMITTQTAYSSS 423 Query: 385 AQTIKTQDQILNTLVNLR 402 A +T D++ T+ L+ Sbjct: 424 ATVFRTCDEMSQTVSGLK 441 >UniRef50_A4WW59 Putative uncharacterized protein n=4 Tax=Rhodobacter sphaeroides RepID=A4WW59_RHOS5 Length = 474 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 111/468 (23%), Positives = 177/468 (37%), Gaps = 67/468 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGSKVGLGVKVA 55 + + V+GL A AT L I +NIANS TYG+K A F M +G+ GV+ Sbjct: 6 SLNAGVAGLYANATKLASIADNIANSGTYGYKRADADFESMVITQSANSGTYSAGGVRAN 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRL--------VDSNGSVFYSRNGQFKLDENRN 107 + G +T +D+AIS G + N ++ +R G FK D N Sbjct: 66 TLRLVEERGAIVSTSNAMDIAISGRGMLPVVRETSLGSTTGNDALLMTRTGSFKTDPNGV 125 Query: 108 LVNMQGLQLTGYPATGTPPTI----QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 L GL L G+PA + + I AA TT ++ +NL + Sbjct: 126 LKTDTGLVLLGWPANADGTVPTMSRDSISQLQPVVIAANQTAADPTTRMNLGVNLPAERT 185 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS------- 216 + + A Y + + + N W + QDS+ Sbjct: 186 KLGASASPLTVAVEYFGNLGTSETLQVSYYPTIPTVAADSPTNKWTMVIQDSASSDRTIA 245 Query: 217 ----------------------------------DPNSIAKTATTLEFNANGTLVDG--- 239 + +A + ++ GT Sbjct: 246 IYELQFSDARSGGGTLLDLSGATPAGSPAVKPLSTFSPVAGVSFDVDPYGAGTPTASPAY 305 Query: 240 AMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 A T A+ G+ T L+ +++ Q +G T+NG G+L +I+ Sbjct: 306 NSATGQVTLAVGGSAANTLDLTLGRPGSASALTQVSGDFAQTGITKNGSPVGNLTGVEID 365 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 G + Y T+++ QI L + N GL + + ++ + SG L AG G G Sbjct: 366 AGGLIKATYDTGFTRVIYQIPLVDVPNYNGLTALNNQTFAISPDSGSFYLWDAGDGPTGD 425 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + A E S D+++EL N+I QR Y SNA+ I+T D++L NL+ Sbjct: 426 VVGYAREGSTTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTNLK 473 >UniRef50_A3SFR5 Putative flagellar hook protein n=2 Tax=Sulfitobacter RepID=A3SFR5_9RHOB Length = 433 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 114/439 (25%), Positives = 176/439 (40%), Gaps = 50/439 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDF 61 A VSGL A + + I NIANS T G++ G A A G GV ++ Sbjct: 6 ALQTGVSGLRANSKAVGSISENIANSNTVGYRRGFAHMVTTTASGGNGDGVLSVNAVEEL 65 Query: 62 ---TDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-----FYSRNGQFKLDENRNLVNMQG 113 T G +T D+AI NGFF + + +R G F DE NL N G Sbjct: 66 DIATAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLKNAAG 125 Query: 114 LQLTGYP----ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 L GYP + ++I N ++A T+T + NL S D Sbjct: 126 YYLAGYPYGLEGDIGSVDRTSFKDMETVNIGNLNISAGVTSTITAFGNLPSQDT------ 179 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPNSIAKTATTL 228 S VF + G + +S + T N W + +D N + T+ Sbjct: 180 --GQADPGAPFVTSSEVFTALGESQRVSFSWAPGTTANTWDLAI---ADQNGNGLGSVTI 234 Query: 229 EFNANG---------TLVDGAMANNIATGAINGAEPATFSLSFL---------------- 263 EFN G + ++ A AT +L Sbjct: 235 EFNNAGPAAGSPLSYSNINSTATAPAAFTVDPATGVATITLDNGVVPQEIDITLGKPGAF 294 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 + + Q G ++ A ++G G+LV +I +DGT+ G + N + L I +A AN Sbjct: 295 DGISQFAGDFSL-AFDRDGSSAGELVRTEITEDGTLFGVFDNGMRRALYDIPVAVVANPN 353 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL N + + +G A + G++ GALE SNVD+++E+ ++I AQR + + Sbjct: 354 GLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKAQRAFST 413 Query: 384 NAQTIKTQDQILNTLVNLR 402 NA+ I T D +++ L+ Sbjct: 414 NAKVITTVDDMMDETTRLK 432 >UniRef50_Q12T69 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12T69_SHEDO Length = 392 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 111/406 (27%), Positives = 180/406 (44%), Gaps = 33/406 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-KVGLGVKVAGITQD 60 AF +SGLN+ + NLD + NNIAN T G++ + + + S K GLG +++G+ Sbjct: 4 AFYTGLSGLNSYSKNLDNVSNNIANMNTAGYRGMDSFYQALGGDSDKPGLGAQISGLGYR 63 Query: 61 FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ-GLQLTGY 119 F+ G TG D+AI+ GFF L+D VFY+R GQF+ D+N LV+ G ++ G Sbjct: 64 FSVGDIRQTGNDFDLAITGTGFFALLDGE-KVFYTRTGQFEFDQNNVLVDKNTGFKVAGI 122 Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 + G I + + TT S+ NL+ D + + Sbjct: 123 DSNGQLSEINL--------LSYQAIKPTATTKLSLTGNLSPLDDV--------------H 160 Query: 180 KKGSVTVFDSQGNAHDMSVYFVK---TGDNNWQVYTQDSSD----PNSIAKTATTLEFNA 232 + S + +S G D+S+ F T N W+V D +S+ Sbjct: 161 QISSAKMINSLGEEVDLSIKFTNEKATFPNQWKVEILDDKGIVLHSDSVKFGPDGTPEVG 220 Query: 233 NGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQ 292 +G+ + ++ T I+ S + +N+ +G G LV Sbjct: 221 SGSFIFNLADSSGNTTPIDITVGTIGDFSAVTQTSATGVDSNVTLHAVDGKGVGQLVKRS 280 Query: 293 INDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNF 352 + G V NYSN I + +F + L+ E V+ A+ +LG AG G F Sbjct: 281 FDPQGRVTLNYSNGDKVTPFTIAMVDFDDISTLSIESGTVFKASDLE-SRVLGKAGEGRF 339 Query: 353 GTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 L ++E SNVDLS+E +M+V QR YQ++++ + +Q++ L Sbjct: 340 KQLATSSIEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQL 385 >UniRef50_Q9Z5T5 Flagellar hook protein n=2 Tax=Zymomonas mobilis RepID=Q9Z5T5_ZYMMO Length = 412 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 104/411 (25%), Positives = 175/411 (42%), Gaps = 11/411 (2%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------AGSKVGLGVKV 54 MAF +++GLNAA T+L V NNIANS +YGFK T F ++ +G +G G ++ Sbjct: 1 MAFYTSLTGLNAAQTDLSVPSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRL---VDSNGSVFYSRNGQFKLDENRNLVNM 111 QDFT G+ T R LD+ ++ +GFF + +G++ +R+G F D+N N+V Sbjct: 61 RATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSPRPPSGTISLTRDGSFLTDKNNNVVTS 120 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G L Y T + + + + + +++ V Sbjct: 121 DGHYLQVYATTNSGNIYN-NGETGSATGGRVVKNLTLPSYEDQVSISSATGETVQVGNNL 179 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 A D + G V T + + Sbjct: 180 ARTGDVTVTGTNGDTVIHNAKITLGGATINSDGSTTGGVLTITGGTIGAGVNSVANTATY 239 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI-VATTQNGYKPGDLVS 290 + + + + T S + A N +T ++G L + Sbjct: 240 TSTKAAAPITTSAGVSTLTGVTDLGTLSYNGDTYTGSPITAFNPQTSTDESGDTSSALSN 299 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 + DG V ++N +LG + L + N GL S G+ W+ T +SG A T Sbjct: 300 ISVGTDGKVTATFANGNQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSLNYREADTS 359 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G++ +GALE SN+DL++ELVN+I QRN+Q+N++ I T +Q+++ ++N+ Sbjct: 360 GLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 410 >UniRef50_B6BH25 Conserved domain protein n=2 Tax=Campylobacterales RepID=B6BH25_9PROT Length = 419 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 95/419 (22%), Positives = 162/419 (38%), Gaps = 25/419 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF------------AGSKVG 49 AF +SGL + +++I +N+AN +T GF+ FA MF S +G Sbjct: 5 AFYTGISGLKSNQGGINIITDNLANISTVGFRGYNTEFASMFEDNLNTTSKNSATSSTIG 64 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 GVK+ T + G + + D+AI NG+F + Y+R G F D + +L+ Sbjct: 65 AGVKLQAATMNRDQGVIQISDKSTDLAIVGNGWFGIQ-GEKDTMYTRGGNFTFDRDSDLI 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 G + G Q T I L K+ L T Sbjct: 124 TQDGFYVLGTM-----GANIQDDVLTGILDEVKLGDVKSQEKLRFPQTLTYPSVASTTAK 178 Query: 170 FSAS-NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 F + D + V D N + + + F K D + T Sbjct: 179 FLGNIGTDDEARTIGAGVIDGLNNRNHLRLSFTKVVPQVLPGSQWDVTATTQTLDGTTIY 238 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ---NGYKP 285 + G D A T + ++ + +NI + +G + Sbjct: 239 DTQTGGASFDSRGALISTTLTSIDNNGSPVAIDLGSGFDGVVAISNIPISASSLADGTQG 298 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL- 344 GDL Y +N + V+ ++N +G+I + +F N +GL + ++SG L Sbjct: 299 GDLEGYSVNKNAEVIATFTNGLQSSVGKIAVYHFRNEQGLDRASGARFFEGKNSGSPLFY 358 Query: 345 -GTAGTGNFGT-LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 ++G GT + N LE SNV ++ L ++I+ QR Y +N+++I T DQ++ + + Sbjct: 359 QDSSGENIIGTDILNFHLEGSNVQMTTGLTDLIIFQRAYDANSKSITTADQMMQKALQM 417 >UniRef50_C8WBV9 Putative uncharacterized protein n=2 Tax=Zymomonas mobilis subsp. mobilis RepID=C8WBV9_ZYMMN Length = 417 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 115/415 (27%), Positives = 188/415 (45%), Gaps = 14/415 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKV 54 MAF +++GLNAA T+L V NNIANS +YGFK T F ++ A S +G G ++ Sbjct: 1 MAFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPYASAKNIGQGTRL 60 Query: 55 AGITQDFTDGTTTNTGRGLDVAISQNGFFRL--VDSNGSVFYSRNGQFKLDENRNLVNMQ 112 QDFT G+ T R LD+ ++ +GFF + ++G++ +R+G F D+N N+V Sbjct: 61 RATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSD 120 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G L Y T + G + + + I+ + + +A Sbjct: 121 GHYLQVYATTNSGDIYNNGQTGSATGGRTVKNLTLPSYEDQVSISATDGNTVQVGNNLAA 180 Query: 173 SNADSYNKKGSVTVFDSQGNA-HDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 + + G A K G T ++D A TAT Sbjct: 181 TGTVKIGGTVIENAKITLGGATVQADKTTAKGGVLTITGGTITAADGTISANTATYTSTG 240 Query: 232 ANGTLVDGAMANNIATGAINGA-----EPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 A T+ A +++ G + + S+S + G T +G Sbjct: 241 ATATVTTSAGTSSLTAITELGTLSYNGDTYSGSISTADGTVVTAGTVTASDTDTSGDTSS 300 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 L + + DG V ++N +LG + L + N GL S G+ W+ T +SG Sbjct: 301 ALSNISVGTDGKVTATFANGNQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSLNYRE 360 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 A T G++ +GALE SN+DL++ELVN+I QRN+Q+N++ I T +Q+++ ++N+ Sbjct: 361 ADTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQANSKAISTDNQMVSYVMNI 415 >UniRef50_B9R0M9 Conserved domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0M9_9RHOB Length = 477 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 114/476 (23%), Positives = 194/476 (40%), Gaps = 82/476 (17%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------KVGLGVKVA 55 A + AVSGL+A AT L+ I N+ANS T GFK +F+D+ +G +V Sbjct: 6 AINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTFSDLVSGGGSTQADQVSGTTYAT 65 Query: 56 GITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------SVFYSRNGQFKLDEN 105 + G ++ +AI+ G+F + + FY+R G F++++ Sbjct: 66 SRATNTIGGDISSNDVDTYMAINGEGYFVVTQAADFVDGSTTFADDTFYTRAGDFEVNKE 125 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS----- 160 VN G L G+P G NP+ I I + +AA +TTT + Q +L Sbjct: 126 GYFVNQSGYYLKGFPLDPATGN-PVGDNPSVIQINSQPLAASSTTTVNYQASLPRVPATT 184 Query: 161 -------------------------SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHD 195 + + A S GSVT ++S G+ Sbjct: 185 NYDPNTANSELLNDGANGAPGPNLGATEIGDTGTLEADFLASSISGGSVTAYNSNGSEVP 244 Query: 196 MSVYFVKTGDN----NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAIN 251 ++V + K + W +Y + + + F+ G + A A + Sbjct: 245 LNVRWAKVDNTAGAEVWSMYVDTGGEAGTSYYKVGDVTFDGTGQVSALANTGATAALGVT 304 Query: 252 GAEPATFSLS-----------------------FLNSMQQNTGANNI---VATTQNGYKP 285 + +F+L S+ Q + I V +QNGY Sbjct: 305 TSGTTSFTLDEITVGGVTAGTAGNAADSITISFANGSLTQFADPDGIATSVNLSQNGYAA 364 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 G+L + I++ G V+ +YSN QT+ L +I LA F + L ++AT SG A L Sbjct: 365 GELTNIAIDESGRVIASYSNNQTRALYEIPLATFQAEQSLRRVDGAAFAATSDSGDADL- 423 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G + + ALE SN D++ E +I+ Q+ Y +N++ + + D++L++ +N+ Sbjct: 424 ----SGGGAVISNALELSNADIADEFSKLIITQQAYSANSRIVTSADEMLDSALNM 475 >UniRef50_B5JK44 Conserved domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK44_9BACT Length = 510 Score = 206 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 118/506 (23%), Positives = 185/506 (36%), Gaps = 106/506 (20%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A S +S LN+ + ++VIGNNIAN T FKS +++ F Sbjct: 5 ALSSGISALNSFSKGMEVIGNNIANVNTVSFKSSRIKYSETFNQVLKQSAPSPSSGDRSN 64 Query: 46 ---SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV--FYSRNGQF 100 S+VGLGV+V GI F G ++T + D+AIS GFF + D + F +R G F Sbjct: 65 VQASQVGLGVQVEGIVGQFHQGGLSSTNQLTDLAISGEGFFLVEDPKNATSQFATRGGDF 124 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPPTIQQGANP--------------------TNISIP 140 ++D+ LV G+++ G + G + +I + Sbjct: 125 RIDDRGFLVTSGGMRVQGLTGGSIGFEVDVGEDGKWQFVPNEDTQNGTIAPESYGDIRLD 184 Query: 141 NTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF 200 A+ + L + + +A GS+ D G SV + Sbjct: 185 YDKGDAEVVNSKHTSGTLAR-NSVMFTNDLVGRDASGNAVLGSIPTPDGNGVIDTDSVVY 243 Query: 201 VKTGD----NNWQVYTQDSSDPNSIAKTATTLEF--------------NANGTLVD---- 238 + ++ T D + F + G+L Sbjct: 244 GDASNPHRVGSFVFSTNSDGDATGVEGVTGWHAFMEEAVANLKTLRNVSNEGSLTGVVTD 303 Query: 239 ----------------GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 GA + A ++G + + NT T Sbjct: 304 AEIEQAVSSDFFYAMFGADIDAAANINMDGTAVQQLMIGNGDLTWNNTIDEQATVTAIME 363 Query: 283 YKPGDLVS------------------YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEG 324 PG L + I+D G++V +N + GQI L +F + Sbjct: 364 SFPGSLTEAESLISAVRADKTPELSRFSIDDQGSIVYFLNNGDSFERGQIQLIDFNDKTA 423 Query: 325 LASEGDNVWSATQSSGVAL--------LGTAGTGNFGTLTNGALEASNVDLSKELVNMIV 376 L EG N++S+ ++GV L AGT G++ GALE SNVDL+ E NMI Sbjct: 424 LIREGQNLYSSFGAAGVKESQNGNIDGLQVAGTNGLGSIQQGALELSNVDLTNEFANMIT 483 Query: 377 AQRNYQSNAQTIKTQDQILNTLVNLR 402 QR +Q+ ++ I D IL +VNL+ Sbjct: 484 TQRGFQAGSRIITVSDDILQEVVNLK 509 >UniRef50_Q2RRB3 Putative uncharacterized protein n=2 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRB3_RHORT Length = 472 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 116/453 (25%), Positives = 185/453 (40%), Gaps = 56/453 (12%) Query: 4 SQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV-----GLGVKVAGIT 58 + AVS +NA ++++ I NN+ANS+T G+K+ ASF + G+ G GV + Sbjct: 21 NVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGVVASATQ 80 Query: 59 QDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNMQGLQL 116 G T D+A+ G F + D +G ++Y+R G F + + +LVN L Sbjct: 81 NVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNNYYL 140 Query: 117 TGYPATGTP----PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GYP T GA+ I++ AAK T+ S+Q L + T Sbjct: 141 QGYPTDRNGVPLTNTGNSGASLETINLAGATGAAKATSEMSIQAVLPAQATAGDSTAVPP 200 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS----------------- 215 A Y V ++DS G AH M+V + K D W + D Sbjct: 201 VAA--YTSSSDVEIYDSLGVAHTMTVKWTKMSDTKWTMTLYDPKLSSDMTGDATGAISST 258 Query: 216 -----------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS--F 262 P + A +EF G L ++ T + A S Sbjct: 259 TTGVTDVPANAGPPATSHGIAVDVEFTDQGLLKTPSVLALKITPDASNGTGAAISEIALN 318 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSY-------------QINDDGTVVGNYSNEQTQ 309 L + + G + +G DL I+ G V N++N + Sbjct: 319 LGTAGKANGLSTYSNEDSDGKPAVDLKKVVQDGVTYGTYYSNTISKAGLVYANFTNGISY 378 Query: 310 LLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSK 369 + Q+ LA F+N GL + +SAT SG TAGTG G +++G++E+S VD + Sbjct: 379 PIYQVPLAMFSNVNGLEAVSGTAYSATVKSGTPTYVTAGTGGSGGVSSGSVESSTVDTAA 438 Query: 370 ELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 E +IV+Q+ Y + Q I + ++ L++ + Sbjct: 439 EFSKLIVSQQAYSAATQIISSNQEMFQNLISAK 471 >UniRef50_D2M8A9 Flagellar basal body FlaE domain protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8A9_RHOPA Length = 422 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 120/424 (28%), Positives = 201/424 (47%), Gaps = 35/424 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-----AGSKVGLGVKVAG 56 A S A+S LNA + +L +I +NIANS T G+K+ +ASF+ + A + GV V Sbjct: 6 ALSSAISALNAQSQSLAMISDNIANSQTVGYKTTSASFSQLVTAASGASTYSSGGVTVLA 65 Query: 57 ITQDFTDGTTTNTGRGLDVAISQNGFF--RLVDSNGSVFYSRNGQFKLDENRNLVNMQGL 114 + T G T T D+ IS NGFF + G+ Y+R G F LD + LVN G Sbjct: 66 RSNITTQGLLTTTTSSTDIGISGNGFFPVTTAVTGGTTLYTRGGSFTLDNSGYLVNASGA 125 Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN 174 L G+ + T + I ++ A + T + + N F+ Sbjct: 126 YLLGWRTDADGNVAGGASADTMVPIDTSVAATSGSATTTTTVAANLPADAAVNDTFT--- 182 Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT------L 228 S++++DS G A+ M + + KT +N+W + + ++ A T + Sbjct: 183 -------TSMSLYDSLGTANSMQITWTKTAENSWTATFANPTLASNTATATGTVSGSIAI 235 Query: 229 EFNANGTL--VDGAMANNIATGAINGAEPATFSLS-----FLNSMQQNTGANNIVATT-- 279 FN++G+L + + A TG NGA + ++ + + Q + A Sbjct: 236 SFNSDGSLASTNPSPATISVTGWTNGAADSVITMDLGTAGGTDGLTQYSSGATTPAVDLT 295 Query: 280 ---QNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 +G G L S I DDGTV YSN +T + ++ +A FA + L ++ + +++AT Sbjct: 296 SIESDGMAYGKLSSIAIGDDGTVSATYSNGKTTTIYKVPVATFAAADQLEAKDNGMYAAT 355 Query: 337 QSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 +SG A++ +GT G++ G LEAS D + E +MI AQ+ Y + +Q I +++ + Sbjct: 356 LASGTAVVQLSGTNGAGSIEGGVLEASTSDTNTEFSSMISAQQAYSAASQVISAVNEMYD 415 Query: 397 TLVN 400 TL++ Sbjct: 416 TLIS 419 >UniRef50_Q5FS48 Flagellar hook protein FlgE n=2 Tax=cellular organisms RepID=Q5FS48_GLUOX Length = 411 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 111/418 (26%), Positives = 178/418 (42%), Gaps = 33/418 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV-----GLGVKVAG 56 A AVSGLNA + + NNIANS T G+K+ T SF D +++ L VA Sbjct: 7 AVHTAVSGLNAQSHAFTDLSNNIANSQTTGYKASTTSFEDYVTNNELANDGESLSDSVAA 66 Query: 57 ITQDFT--DGTTTNTGRGLDVAISQNGFFRLVDSNGS-----------VFYSRNGQFKLD 103 T+ T T + +AIS NGFF +V + G +Y+RNG F D Sbjct: 67 TTRQHTDNQCMVTTSTNSTALAISGNGFFNVVQATGQSNDSTPVLGTQQYYTRNGDFSQD 126 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 +N LVN G L GY T T+ + + I ++ Sbjct: 127 KNGYLVNTSGYYLEGYNVDATSGTLGTSLSAIQV---------------PSTIAFRPTES 171 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 + ++ S S T +DS G A + + + K D W V + + S + Sbjct: 172 TKLTATGTLDSSSSKTVDMSTTAYDSTGAASTVDLSWTKLSDTTWAVKDVNDTTGTSNSA 231 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 T T A ++ +T + + + ++ G+ N V+ T + Sbjct: 232 TVTFDSSGAVSSVTSQDSTGASSTSSSSFNYTGSPQDMTVSLSGVTLGSANTVSMTSDSV 291 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G + DG+V+ + N +QL+ +I L FA+ L+++ ++AT SG Sbjct: 292 TTGTFSGISMETDGSVMATFDNGYSQLVAKIPLTTFADPNSLSAQNGQAYTATSQSGSPQ 351 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + T GTLT G++E S DL+ +L +IVAQ+ Y +N + + T DQ+L T + + Sbjct: 352 INAVNTNGAGTLTTGSIEESTTDLTGDLSKLIVAQQAYGANTKVVSTADQLLQTTLAM 409 >UniRef50_Q97H59 Flagellar hook protein FlgE n=1 Tax=Clostridium acetobutylicum RepID=Q97H59_CLOAB Length = 423 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 103/461 (22%), Positives = 174/461 (37%), Gaps = 102/461 (22%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + +SGL LD++G+NIANS+T +KS + +F+D + + Sbjct: 4 AMTSGISGLKVNQNKLDIVGSNIANSSTTAYKSQSINFSDAISETIKGASGATANYGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAI-SQNGFFRLVDSNG------------- 90 ++ LGV + I + G+ TGR LDVAI +G+F + Sbjct: 64 PEQITLGVNSSAIITNTASGSVNTTGRNLDVAITDGDGYFMVASGANMADESECINVSTT 123 Query: 91 -----------SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISI 139 + Y+R+G F LD NLV G ++ GY G + A+ T Sbjct: 124 DHSITSTPSGTDISYTRDGSFNLDNEGNLVTADGRKVLGYSMVGRNTLYEDSADKT---- 179 Query: 140 PNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVY 199 ++ N S T + S+ ++ + D Sbjct: 180 ------------KNIYGNFVSISGAQDETTMAGSDENAATYIAAEGGDDLN--------- 218 Query: 200 FVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 + ++ + + + T + VD + A + Sbjct: 219 -----------KSIVAAVDKNPSGSGTATIKKGDVAFVDANDVDLRADNRYLHTLKIPPT 267 Query: 260 LSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 ++ + + + +G + + I DG + N N +GQI +++F Sbjct: 268 VTKVTATRDASGNAVYSTQEL------KVKGFSIGQDGVITANLDNGSAAAIGQIAMSSF 321 Query: 320 ANNEGLASEGDNVWSATQSSGVALLG------------------TAGTGNFGTLTNGALE 361 N GL EG N + SSG ++ +G +G + +GALE Sbjct: 322 TNAGGLEKEGGNYVKPSASSGQPMVRSGAYSNKLDPTFISSAKKEDNSGGYGKMYSGALE 381 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDL+++ +MIVA R YQ+N + I T D+IL LVNL+ Sbjct: 382 MSNVDLAQQFSDMIVASRAYQANGKIITTSDEILQDLVNLK 422 >UniRef50_A5FUQ6 Flagellar basal body FlaE domain protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUQ6_ACICJ Length = 425 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 112/433 (25%), Positives = 181/433 (41%), Gaps = 48/433 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----GVKVAGI 57 A +VSGL A ++ I +NIANS T G+K F + S V Sbjct: 6 ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQSTASNNGPDSVVANPE 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--------------NGSVFYSRNGQFKLD 103 + +GT T + L +AI+ NG+F + + +Y+R G F L+ Sbjct: 66 YTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFTLN 125 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 + LVN G L G+ T T+ + I + T+ ++ L ++ Sbjct: 126 SSGYLVNGAGAYLDGWSVNPTTGTVNTS-SLAPIQVSQGASPPVPTSNVTLSATLPTTPS 184 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-TGDNNWQVYTQDSSDPNSIA 222 VT V V+DS GN +++ + TG N S + Sbjct: 185 STPVTT-------------QVDVYDSLGNMQPLNLSWSPVTGSANTWTLNVSSPNATPST 231 Query: 223 KTATTLEFNANGTLVDGAMANNIATGA----------INGAEPATFSLSFLNSM----QQ 268 + T+ FN NGTL + A A+P T S Q Sbjct: 232 VGSATMAFNTNGTLSSITAGTGTTSPAAGQLQISPSYNGSAQPITLDFGAPGSTAGLTQY 291 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + N+ +QNG G + I+ G + NY+N ++ + QI LA+FA+ + L ++ Sbjct: 292 AGTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANYTNGFSKQIAQIPLASFASPDALQNK 351 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 + +ATQ+SG A + G G+ G L G++E SNVD++ + ++I AQ+ Y +N + + Sbjct: 352 SGQIETATQASGAATINAVG-GSGGALVTGSVENSNVDIATQFTDLINAQQAYTANTKVV 410 Query: 389 KTQDQILNTLVNL 401 QIL T VN+ Sbjct: 411 TAAQQILTTTVNM 423 >UniRef50_B0ULI9 Flagellar basal body FlaE domain protein n=10 Tax=Rhizobiales RepID=B0ULI9_METS4 Length = 456 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 114/456 (25%), Positives = 173/456 (37%), Gaps = 63/456 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS----KVGLGVKVAGI 57 A AVSGL A A +L+ I NIAN+ T G++ +FAD+ A + V + Sbjct: 6 AMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRIDTTFADLLAEQPNDRQTSGSVAASSQ 65 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG----------SVFYSRNGQFKLDENRN 107 + G +TG ++A++ GFF + + Y+R G F +D++ Sbjct: 66 FTNTLQGNIASTGITTNMALNGGGFFVVRTPSATSGGQPSFTSQDLYTRRGDFAVDKDGY 125 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 LVN G L G I I N + A+ TTT S NL S+ Sbjct: 126 LVNGAGSYLVGQSLDPRTGQATGNGV---IRIGNQALPAQATTTISYAANLPSTPGTTGP 182 Query: 168 T-------------------------PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 S S S GS+T + + G ++ + + K Sbjct: 183 AVLGALAGGDVRVMSGTSASPATVAASDSGSFLASSLSGGSLTAYSAAGGPVNLQLRWAK 242 Query: 203 --------TGDNNWQVYTQ----DSSDPNSIAKTATTLEFNANGTLVDG-----AMANNI 245 + W ++ S + T FNA+G L + N Sbjct: 243 VAAADSAAGTGDTWNLFYAKQNGTDSTATAWTNAGTAFTFNASGQLTTPAGGSATIPNVT 302 Query: 246 ATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSN 305 G G + L G QNG G L S + DG V G YSN Sbjct: 303 VDGVPLGTLTLNTASGGLTQYGAAGGQVTTNTLQQNGSASGTLRSLAVTSDGRVTGTYSN 362 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 T L Q+ +A F + L +E ++ T SG + G AGT T+ G +E SN Sbjct: 363 GTTATLAQVGIARFNAPDALKAESLGNYAQTVESGGPVSGLAGT----TVVGGNVEQSNT 418 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 D + E +I+ Q+ Y +N + + T Q+++ LVN+ Sbjct: 419 DTANEFSKLIITQQAYSANTRVMSTAQQMMSDLVNI 454 >UniRef50_B2V236 Flagellar hook protein FlgE n=9 Tax=Clostridium RepID=B2V236_CLOBA Length = 366 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 90/427 (21%), Positives = 147/427 (34%), Gaps = 93/427 (21%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +SG+ LDVIGNNIAN +T GFKS +A F+DM Sbjct: 4 SMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNASEATAPTSTKGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLG +++ I + G +TGR LDV +D Sbjct: 64 AKQVGLGSQLSSINKVMGQGNALSTGRSLDVC-------------------------VDG 98 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + ++ +G ++ Y A T + + + N Sbjct: 99 DGYIMVSKGPEV--YAADKTGTGADAKNTIGISTSGKLTGGGENEILYTRDGNFTLDHE- 155 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 + + + Y +K GD+ D ++ Sbjct: 156 ---------------------GNLLTADGYRVMGYLLKDGDDGKPSVAWGEKDGDAPVAN 194 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 + + +GA N + A Sbjct: 195 YVDADSKNLHAVGEGAQLNTLKIPDKVLAPKRDPDGKPTAEFV----------------- 237 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 + S+ I DG + + LGQ+ +A F N EGL S G N+ + +SG ++ Sbjct: 238 EVPVKSFSIGKDGVITAVLGDGSRTALGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEII 297 Query: 345 GTA----------GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 T + FG GALE+SNVDL+++ +MI A R +Q++++ I T D+I Sbjct: 298 KTPVGKLATDFSDNSKGFGEFVQGALESSNVDLTEQFTDMITATRAFQASSKMITTGDEI 357 Query: 395 LNTLVNL 401 L T+ L Sbjct: 358 LQTITGL 364 >UniRef50_C1A555 Flagellar hook protein FlgE n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A555_GEMAT Length = 506 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 113/507 (22%), Positives = 179/507 (35%), Gaps = 111/507 (21%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL +DVIGNNIAN T FK+G +F + FA Sbjct: 4 SLYAGVSGLRNNQVRMDVIGNNIANVNTVAFKAGRVTFKEGFAQLLAGASRPPGDQGGIN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG+++ I Q F G TG D+AI + FF + N FY+R G F++D Sbjct: 64 PIQIGLGMQIGSIDQIFNQGNLETTGLNTDIAIQGDSFFVVRKGN-QSFYTRAGNFQVDA 122 Query: 105 NRNLVNM-QGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 LV+ G + G +I +P ++A TT + NLN+S Sbjct: 123 LGQLVSPANGFIVQGRMYENGQLQ----DGIQDIRLPFGQKVSANPTTDMKLAGNLNASA 178 Query: 163 PLPTVTPFSASNADSYNK-----KGSVTVFDSQGNAHDMSVYFVKTGDNNWQV------- 210 P+ + + + VFDSQG HD+ + KTG N+W Sbjct: 179 PVFQGDFNDPMDRALPINEKAWTETQIGVFDSQGTKHDVKLQMWKTGPNSWDWRIDPIAS 238 Query: 211 -YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS-FLNSMQQ 268 T + + + L G V + + PA +S S Q Sbjct: 239 AQTFEVETDGNSPPSDIPLPTPPAGYEVLPDNVRVYSATGVEYNNPADYSFSAGPPPAVQ 298 Query: 269 NTGANNIVATTQNGY--------KPGDLVSYQINDDGTVVGNYSNEQTQLL-----GQIV 315 T + + + GY + ++ ++ G + N S + +I Sbjct: 299 FTANMPVNSQIKIGYFMSPDSATPSENSGTFTFDNAGLLNTNISASLNFAVPGANPVRID 358 Query: 316 LANFANNEGLASEGD------------------------------NVWSATQSSGVALLG 345 L GL ++ +S +A + Sbjct: 359 LTLGGGVNGLTQFASTSSTAVLRDQNGYTAGTLQNFSIDRFGLITGFFTNGTTSPLARIV 418 Query: 346 TAG------------------TGNFGTLTNGALE------------ASNVDLSKELVNMI 375 A + G + ALE SNVDL++E NMI Sbjct: 419 LADFNNPSGLLRIGDNMYQESANSGGAVLGFALEGSQSQMTSGALEMSNVDLAQEFTNMI 478 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNLR 402 VAQR +Q+N + + T D++L L+ ++ Sbjct: 479 VAQRGFQANGKVVSTSDEMLQELMTIK 505 >UniRef50_C0QPA5 Flagellar basal body and hook protein FlgE n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA5_PERMH Length = 540 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 142/336 (42%), Gaps = 30/336 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS------------KVG 49 +F +GLNA L VI +NIAN T GFK+ +F D+ + S ++G Sbjct: 4 SFYTGNAGLNANKNWLSVISDNIANVNTIGFKAERVNFEDLISSSLTTFANNSPKNMEIG 63 Query: 50 LGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLV 109 G V T+DF+ G NT D+A+ GFF + D+ +Y+R GQF+ D N +L+ Sbjct: 64 GGSFVGSTTKDFSQGALMNTNTPTDLALDGEGFFMVRDAQDVTYYTRAGQFRTDANGDLI 123 Query: 110 NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTP 169 N+ G++L G+ I+IPN + TT A + + Sbjct: 124 NLNGMKLLGWQLDDAGNI---AGAIGAINIPNDMPPHVTTKLALKEPTNLDAGSELVTGV 180 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP-------NSIA 222 F S+A +Y+ ++TV+DS G H+ +YFV TG N W+V+ +P ++ Sbjct: 181 FDTSDARTYSYVNAITVYDSLGVPHEAQLYFVHTGPNQWRVFGLMDDEPIQFNVPGDANT 240 Query: 223 KTATTLEFNANGT----LVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 A +EFN G G + TGA E LN+ G+ I Sbjct: 241 YDALVVEFNGVGQINRVFGYGINTDQTITGAGTETESGDLGQFTLNNTPVLPGSVVITQY 300 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 T + DDG N +++G I Sbjct: 301 TDGATTY----NVNWIDDGHGNIIDLNNDNRVVGSI 332 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 116/289 (40%), Gaps = 4/289 (1%) Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++ GY G + + + S+ I + + Sbjct: 255 NRVFGYGINTDQTITGAGTETESGDLGQFTLNNTPVLPGSVVITQYTDGATTYNVNWIDD 314 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + + + D +V+ + N S +T + Sbjct: 315 GHGNIIDLNNDNRVVGSISYDDGTVFINQFAGNGATETLTAGSYKTYDTTVSTNTIPPDS 374 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 ++V + N + G P F+L N Q + I Q+GY GDL+S + Sbjct: 375 ISIVPIPVNNPNSATLNTGGNPIQFTLDIQNMKQVE--SEFIFYAEQDGYAKGDLLSVSV 432 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 ++DG V G YSN Q + +I +A F + E L +G+N++ + ++ G Sbjct: 433 SEDGLVRGVYSNGQVKDWARIAIATFNDKEILIRKGNNLFLPNSQTYTPIIVPGGV--IS 490 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + G LE SNVD+S+E +N+I AQR YQ+NA+TI T DQ+L +N++ Sbjct: 491 KIRGGFLELSNVDISREFINLITAQRAYQANARTITTSDQVLQETMNIK 539 >UniRef50_C6N701 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N701_9GAMM Length = 408 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 87/402 (21%), Positives = 148/402 (36%), Gaps = 36/402 (8%) Query: 31 GFKSGTASFADMFAGSK---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD 87 GFK ++ + G +G GV+V+G+ ++ G D+AI +GFF + Sbjct: 5 GFKRSDVFYSSLGNGQGEEGMGHGVRVSGMRTNYGPGNYLKGMGDSDLAIVGHGFFVVKL 64 Query: 88 SNGSVFYSRNGQFKLDENRNLVN-MQGLQLTGYPATGTPPTIQQGANPT-------NISI 139 N Y+R+G F E+ L++ G Q+ GY + G I + T +I + Sbjct: 65 KNNEFVYTRDGHFNF-EDGILIDRKTGGQVQGYDSAGNLAPIHEKGPQTTPGKASRDIFL 123 Query: 140 PNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK--GSVTVFDSQGNAHDMS 197 + +A + N+ + + Y ++D+QG AH ++ Sbjct: 124 KGSFVAHLIDEKKNTDPNIPDPNIPDPTPKAPTEKKNKYENVVLTLDKIYDAQGKAHKVT 183 Query: 198 VYFVKTGDNNWQVYT----------QDSSDPNSIAKTATTLEFNANGT----------LV 237 F Q D D + +EF + + Sbjct: 184 FEFKNEPPLGEQYNLEKFWVLEDVHCDDKDVDITPYYDQKIEFAYSSSGAEPGKDSIQFG 243 Query: 238 DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 NI G+ + + L + N NI +GY G + +++G Sbjct: 244 LNGKQVNIYFGSAHNGSTNSVQLDTVEGAFSNEKRTNIEIDYNDGYGVGKQSYWSFDEEG 303 Query: 298 TVVGNYSNEQTQLLGQIVLANFAN-NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 + Y N QT + LA F + L DN + A + G+ G F + Sbjct: 304 QIAYYYDNGQTIKGIHVGLARFDDMENNLIQTQDNFFRAKTNRGIH-YGRPNNNGFECIR 362 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 LEASNVD + E N++V QR +Q+ +Q + Q+L L Sbjct: 363 ANELEASNVDSTAEFANIVVLQRMFQACSQIMDIDKQLLEEL 404 >UniRef50_Q2LSZ5 Flagellar hook protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ5_SYNAS Length = 518 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 24/288 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +GLNA+ +D+IGNN+ANS+T G+KS FA+M + S +VG GV Sbjct: 15 ALWIGTTGLNASQRQMDIIGNNLANSSTLGYKSADTQFANMLSQSLTSGSGSFQVGQGVA 74 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 ++ + F G+ +TG D+AI GFF + D G+++Y+R G F +D++ LV++ G Sbjct: 75 ISSVNTKFDQGSFESTGSVTDMAIDGEGFFPVKDKEGAIYYTRAGAFVIDKDGYLVDVNG 134 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++ G P A T+I + N A T T + +NLN S+ T Sbjct: 135 YRVQGINLFSAPG----DAELTDICLKNIQSAPSATKTFGIGVNLNDSEDAGT------- 183 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + S VFDS+G H++S+ F KT + + + +I + ++F+ + Sbjct: 184 -----SFVVSQNVFDSKGAIHNLSLTFTKTEGDGYWGCQAKLDNVETINSSCCGIKFDES 238 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 G L + + + A G + +++ + N + Sbjct: 239 GNLKNTYLTSCSAGAVSGGGAITSTTVNKPGQLYLNGTIACTRGADAD 286 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 4/263 (1%) Query: 143 LMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 A T+TT + L + + A + + F +D + Sbjct: 256 GGGAITSTTVNKPGQLYLNGTIACTRGADADTWTISSSEYPNLEFSLGDLGNDDEIAIDL 315 Query: 203 TGDNNWQVYTQDSSDPNSIAKTATTL-EFNANGTLVDGAMANNIATGAINGAEPATFSLS 261 G + + ++ T+ + +N V I T++L Sbjct: 316 DGKGGTDITLALGAGFADLSSFDLTISQVESNAADVTFEFPGLANGADIGSGNALTWNLI 375 Query: 262 FLNSMQQ--NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANF 319 +++Q + I A +GY G L S + DG + G ++N QT LGQ+VLANF Sbjct: 376 GDDALQVTGYAATSVIKALEVDGYTSGVLKSLSVEKDGIISGIFTNGQTSDLGQVVLANF 435 Query: 320 ANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQR 379 N L G + ++ T SG A++ + GTG G + + +LE SN D+S E VNMI AQR Sbjct: 436 PNVGALRKIG-SYFAETNFSGAAIINSPGTGGLGEIMSNSLEQSNTDVSMEFVNMINAQR 494 Query: 380 NYQSNAQTIKTQDQILNTLVNLR 402 YQ++A+ I T D++L L+N++ Sbjct: 495 AYQASARIITTSDEMLTELMNIK 517 >UniRef50_A6Q2N3 Flagellar basal body and hook protein FlgE n=2 Tax=Bacteria RepID=A6Q2N3_NITSB Length = 533 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 95/349 (27%), Positives = 148/349 (42%), Gaps = 37/349 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------KV 48 +F SGLNA T L VI +NIAN T GFK +F+D+ A S ++ Sbjct: 4 SFYTGNSGLNANKTWLGVISDNIANVNTNGFKQERVNFSDLVASSLTTYSSSGAPRNKEI 63 Query: 49 GLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRN 107 G G VAG +DF+ G+ NT + L +A+ GFF + + + +Y+R G F++D N + Sbjct: 64 GGGAFVAGTIKDFSQGSFKNTNQPLSLALDGEGFFMVKNPSADLTYYTRAGDFRVDANGD 123 Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 ++N GL+L G+ T +I+IPN L T A + Sbjct: 124 VINPAGLKLQGWMLDETGNI---AGAMGSINIPNNLDPKNTDKVAFENPANLDAGVDAIT 180 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS-----DPNSIA 222 F S+ +Y+ ++T +DS G +H + YF+KT N W+V+TQ + + Sbjct: 181 KTFDPSDPTTYHYVNTITTYDSLGTSHVLKHYFIKTDINTWRVFTQLDDRAVTYNDGTNE 240 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-------NSMQQNTGANNI 275 A L+FN G L + AT + +E AT F T N Sbjct: 241 YAALELKFNGKGELTSAQYISQPATQSEAASEAATDDGIFSVTNIPVLPGTIYITQDQNG 300 Query: 276 VATTQNGYKPGDLVSYQIND--------DGTVVGNYSNEQTQLLGQIVL 316 + T N G++V Q + DG + + G + + Sbjct: 301 NSVTWNDDGSGNIVDIQTGEIKGTISYDDGKITIIGAAGDGNTTGTLTV 349 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 118/311 (37%), Gaps = 10/311 (3%) Query: 100 FKLDENRNLVNMQG---LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI 156 F ++R + G G + A T Sbjct: 224 FTQLDDRAVTYNDGTNEYAALELKFNGKGELTSAQYISQPATQSEAASEAATDDGIFSVT 283 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS 216 N+ +T N+ ++N GS + D Q ++ + ++ Sbjct: 284 NIPVLPGTIYITQDQNGNSVTWNDDGSGNIVDIQTGEIKGTISYDDGKITIIGAAGDGNT 343 Query: 217 DPNSIAK-----TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 TT G + + + T +++ Sbjct: 344 TGTLTVNYKDFSDTTTANVTDLGAIKTSTINYSDNTSRFLNNGATDTAITEDFKKLTQLD 403 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 + I QNG GDL+S + +DG + G Y+N Q + + ++ +A F + E L +GDN Sbjct: 404 SEFIFYAQQNGASKGDLMSISVTEDGIIKGTYTNGQVKDVARLAVATFKDKEILVRKGDN 463 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 ++ Q + ++ G + +G LE SNVD+S+E +N+I AQR YQ+NA+TI T Sbjct: 464 LYLPNQQTFTPIIVPGGV--ISKIRSGMLEMSNVDISQEFINLITAQRAYQANAKTITTS 521 Query: 392 DQILNTLVNLR 402 DQIL T ++++ Sbjct: 522 DQILQTTMDIK 532 >UniRef50_B9MGE1 Flagellar basal body FlaE domain protein n=3 Tax=Comamonadaceae RepID=B9MGE1_DIAST Length = 531 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 92/286 (32%), Positives = 125/286 (43%), Gaps = 13/286 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M F Q +SGLNA+A NLDVIG+NIANS T GFK+ FA M +G+ G+GV+ Sbjct: 1 MGFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVE 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ I Q F G T TG LDVAI+ NGFF L +GS Y+R G FKLD N+V G Sbjct: 61 VSAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP---TVTPF 170 Q+ GYP + A+ TT NL++ P Sbjct: 121 AQVMGYPIDPVTGLRTSSTAVPLTFPTTAPIPARQTTAIKTAFNLDARTPNAKGDPGATP 180 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS---SDPNSIAKTATT 227 + S+ V+DSQG A +S YF K G N W +Y Q + P ++ Sbjct: 181 PVAATPRTTYGTSLNVYDSQGVATPLSFYFEKNGANTWDIYNQLDDLTTTPPTVPAITGR 240 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGAN 273 L + NG + + + A + + + Sbjct: 241 LIADKNGAVAATLEPVATSVANADPALTQKDDFPTSFTYRFYGPDD 286 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 126/283 (44%), Gaps = 1/283 (0%) Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 AT P ++ + + T + T++ + +A + Sbjct: 250 AATLEPVATSVANADPALTQKDDFPTSFTYRFYGPDDQGVYAIRETTLSFTNPEDAWDFT 309 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + T ++ G + + ++ A + E Sbjct: 310 YSDAPTNSLVASARLKDNLVDYAGGTSPAGGTFGVADLTDAPAAAKQSFELALMVNPSPA 369 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 + A G+ +L LN + Q + +Q+GY G+L + ++G + Sbjct: 370 NPNSPTAPGSNPAPGSYPVTLD-LNKVTQFGTKFAVSELSQDGYTSGELTGINVENNGMI 428 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 + YSN T+ GQI LA+F N +GLA+ G N W T SG +LG GNFG L GA Sbjct: 429 MTRYSNGVTRAEGQIALASFRNTQGLAAVGGNNWVETYESGQPVLGAPTDGNFGALRAGA 488 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LE SNVDL+ ELVNM+ AQR YQ+NAQTIKTQDQ+++TLVNLR Sbjct: 489 LEDSNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVNLR 531 >UniRef50_A5W0G4 Flagellar basal body FlaE domain protein n=3 Tax=Pseudomonas RepID=A5W0G4_PSEP1 Length = 584 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 133/276 (48%), Gaps = 26/276 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGV 52 M+F+ +SGL AA LDV GNNIAN T GFK+ A FAD++AG+ +VG GV Sbjct: 1 MSFNIGLSGLYAANKQLDVTGNNIANVNTTGFKASRAEFADVYAGANRLGVGKNQVGNGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 ++A I+Q FT G TG LD+ I GFF L D NGS Y+R G F+ ++ + Sbjct: 61 RLAAISQQFTQGDVNTTGNALDMGIQGQGFFVLSD-NGSKVYTRAGSFQPSKDNFVETSD 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL-----------NSS 161 GL+L GY A T + G T++ I + + K T+ INL + Sbjct: 120 GLRLQGYMADATGKIQKSG--LTDLKIDTSALQPKPTSLIDQGINLNSSAASIPFQVYDN 177 Query: 162 DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS----D 217 P + F ++ +Y + + TV D+ G H++ Y+ KT N W +YT D Sbjct: 178 TKPPALAAFDPADPSTYQRSSTSTVLDADGVEHEVQQYYRKTDTNEWTMYTLVDGRNPFD 237 Query: 218 PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGA 253 P S A T+ +N++GT+ + Sbjct: 238 PASTTPLAGTINYNSDGTISSMLADTTGVPSGASFT 273 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 32/268 (11%) Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS----DPNSI 221 PF S+ +Y + V+DSQGN H M ++ KTG N W +YT +P S Sbjct: 316 ANKPFDPSDDSTYTRSFPTKVYDSQGNEHTMEQFYRKTGTNEWTMYTLVDGRNPFNPGST 375 Query: 222 AKTATTLEFNANGTLVDGAMANNIATGAINGA---------------------------- 253 T+ FN++G++ N + Sbjct: 376 EPLVGTIAFNSDGSVNSMTADNTGHPVGTSFTVVNNTFSMIGWVPAAEDASGNWSANGAV 435 Query: 254 EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 A + S ++ +Q+GY G L + I+ G + ++SN Q++ +GQ Sbjct: 436 GDAAGMKMSMASTTSYNTETARMSQSQDGYATGILSNLSIDATGVLFASFSNGQSRAIGQ 495 Query: 314 IVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVN 373 + LA+FAN +GL G W+ T +SG+ + + TG G + + +LE SNV+L++ELV+ Sbjct: 496 VALASFANEQGLQQIGSTRWTETYNSGIPGIDSPKTGTLGAIESNSLEGSNVNLTQELVD 555 Query: 374 MIVAQRNYQSNAQTIKTQDQILNTLVNL 401 +I AQ YQ+NA+TI T+ ++ T++ + Sbjct: 556 LIKAQSYYQANAKTISTESTVMQTIIQM 583 >UniRef50_D1B6B8 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B8_THEAS Length = 636 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 89/281 (31%), Positives = 128/281 (45%), Gaps = 10/281 (3%) Query: 132 ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQG 191 + TN+ T + L T + + S + ++DS G Sbjct: 355 SAATNLLAAAQSPTGNAVTVQATTDGLGLVVKDGATTVATLNQRLSSVHTSKMDIYDSLG 414 Query: 192 NAHDMSVYFVKTGDNNWQVYTQDSSDPNSI-AKTATTLEFNANGTLVDGAMANNIATGAI 250 NAH + V + K +N W+ S+P + F + G + + A Sbjct: 415 NAHTLEVSWEKIDNNQWRWRAFLPSEPGITMTDNTGVINFTSEGKIEGVDTFDVTINFAA 474 Query: 251 NGAEPATFSLSFLN---------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 GAE +T L F + Q A A Q+GY G L Y ++ DGTV G Sbjct: 475 LGAEDSTVRLDFSGRSFDKDAIEGVTQYGSAFTTKAYYQDGYPMGVLQDYAVSSDGTVQG 534 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 YSN Q Q L ++ LA FAN +GL E V+S + +SG+A + G G + LE Sbjct: 535 VYSNGQRQPLYKLALALFANPQGLFKESGTVFSQSANSGIAQIVKPMEGGAGRIMGSNLE 594 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS+E VN+IVAQR +Q+NA+ I T DQ+L L+NL+ Sbjct: 595 MSNVDLSQEFVNLIVAQRGFQANARVITTSDQVLEELINLK 635 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 80/385 (20%), Positives = 133/385 (34%), Gaps = 33/385 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSG+ T LDV+GNNIAN T GFK F D+ + Sbjct: 4 SLYSGVSGVKGHQTYLDVVGNNIANVNTTGFKRSNVLFQDLLYQNVRGAMAPDAGQGRGG 63 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 +VGLG V + T GT TG D IS +G+F + FY+R G + Sbjct: 64 INPMQVGLGSMVGAVETIHTQGTMQYTGNRNDFGISGDGYFVVKTGA-DTFYTRAGSATM 122 Query: 103 DENRNLVNMQ-GLQLTGYPATGTPPTIQQG--ANPTNISIP-NTLMAAKTTTTASMQINL 158 D NLV G GY + P + +I+IP + A TT + NL Sbjct: 123 DSGGNLVMSGMGYIYQGYKMSKDPTDPTKYVEGPLGDINIPVGQKLEANKTTLGGYRCNL 182 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 +S + ++++ G+ T +Q + F+ D V + Sbjct: 183 DSRVKAHLPMGITGNDSEFKIVLGTNTYTLNQVSEGGAVASFMTLSDGTNSVTLGFPAAG 242 Query: 219 NSIAKT---ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 + T + G + + ATG + + S L ++ + Sbjct: 243 PIVDPTSLLPNLTQITTAGAFT--GASYDPATGKLTVTDGTNSSTVDLAALMDFQVLSVK 300 Query: 276 VATTQNGYKPGDLVSYQINDDGTVVGNYSNE-QTQLLGQIVLANFANNEG---LASEGDN 331 A Y + D +V + + + + +G L++ + Sbjct: 301 DALNNTYYYLAEFNDVATTGDKELVLWGPDASAGGAMTRYSVTVPTRRDGTFDLSAATNL 360 Query: 332 VWSATQSSGVALLGTAGTGNFGTLT 356 + +A +G A+ A T G + Sbjct: 361 LAAAQSPTGNAVTVQATTDGLGLVV 385 >UniRef50_A5N7C1 FlgE n=2 Tax=Clostridium kluyveri RepID=A5N7C1_CLOK5 Length = 348 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 97/424 (22%), Positives = 156/424 (36%), Gaps = 103/424 (24%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + +SGL A L+VIGNNIANS+T +K+ + +F DM + Sbjct: 4 SMYSGISGLRANQQKLNVIGNNIANSSTTAYKTQSMNFQDMISQNLSDPSAPSTSIGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 + GLGV+VAGI+ DFT G+ T R LD AI Sbjct: 64 GKQSGLGVQVAGISTDFTTGSMGTTNRNLDFAIDG------------------------- 98 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 V G G + T +I + N + + Sbjct: 99 TGYFVVGTGK--LGETSDDTGISIDEDNNILG----------------------GGDNEV 134 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 S S+ + + G + ++ T +NN T +D + Sbjct: 135 ENTIEAHYSRDGSFYLDTQGNLINQNGYRV---MGYLVTDENNTSTITYLQNDTEDTFQN 191 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 A +ANGT+ + + Sbjct: 192 AVQF-VDANGTVTSVTDKLVPLSIPNYITKDDQLV------------------------- 225 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 + S+ + DG + ++ T +LGQI + +F N GL EG N+++ + +SG ++ Sbjct: 226 --KVKSFSVGKDGIITAQLTDSTTAVLGQIAMVSFQNEGGLVKEGGNLYTTSSNSGQPIV 283 Query: 345 ------GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 + +G +T G LE SNVDL+++ +MIVA R +Q+N + I D IL L Sbjct: 284 MSGKGAENDNSAGYGKITQGFLEMSNVDLAQQFTDMIVATRAFQANGKMITNGDTILEDL 343 Query: 399 VNLR 402 +NL+ Sbjct: 344 INLK 347 >UniRef50_Q6AJT3 Related to flagellar hook protein (FlgE) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJT3_DESPS Length = 566 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 142/321 (44%), Gaps = 23/321 (7%) Query: 97 NGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI 156 G+ ++D NLV+ +I + A +++ + Sbjct: 253 AGEVEIDAAGNLVDTSSATTPKANFDPFATSIAWDDTGATTTAVTASTAGSPSSSIDKSL 312 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS 216 ++ F + ++ SV +FDS GN H +S YF KT DN W Y Sbjct: 313 -----RENKSICTFDYKDPKTFTYSASVQIFDSLGNPHLISTYFRKTDDNTWDTYYSLEK 367 Query: 217 DPNSIAKTA------TTLEFNANGTLVD---------GAMANNIATGAINGAEPATFSLS 261 + S+ T L F + G VD NG+EP +++ Sbjct: 368 EDGSVIPADPNAISLTQLRFGSEGQPVDSAGLPLDGPPTATTEEPIDWGNGSEPTPITVT 427 Query: 262 FLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 F Q ++ +++ QNGY G+L I++ G V+ YSN + + + I LA F N Sbjct: 428 FD--TTQFNSSSKVISQEQNGYGAGNLSGVNIDEGGNVIAAYSNGKNRNIAAISLAKFQN 485 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL EG+N+++AT +SG +G G G + +LE SNVD+S E V MI QR Y Sbjct: 486 PAGLTMEGNNLFAATGTSGAPRVGLPGPE-LGKVFTNSLEQSNVDMSVEFVRMITIQRGY 544 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 Q+N++ I T D++L L+NL+ Sbjct: 545 QANSKIITTVDELLGELINLK 565 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 121/307 (39%), Gaps = 20/307 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A VSGLN + VIGNN+AN+ T +K F+D+ + S +VG GV Sbjct: 6 ALYTGVSGLNTNGQAMTVIGNNLANTNTIAYKGSRTMFSDLLSSSVTGSGGTSQVGRGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQ 112 ++ + DF+ GT +T GLD+AI N FF L SN + YSR G FK +E LVN Sbjct: 66 LSRVDNDFSQGTFESTSSGLDLAIEGNSFFLLSPSNDQSIHYSRAGSFKFNEGGYLVNPG 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 GL++ G G +P++I + M T+ + S+ F A Sbjct: 126 GLRVQGIAYGADGEL--AGGDPSDIFLDGAGMIKGAATSEMIMNTNLDSNAKIFPIDFDA 183 Query: 173 SNADSYNKKGSVTVFDSQGNAHDM---------SVYFVKTGDNNWQVYTQDSSDPNSIAK 223 SN +SYN +T+ + Y+ KT +N+W+ Y Sbjct: 184 SNTNSYNFSEELTLTGPATVPATVPPSNSTITAQTYYRKTAENSWECYYTAKETMADGTA 243 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 ++T G + A N + T + + + + V + G Sbjct: 244 GSSTAASIKAGEVEIDAAGNLVDTSSATTPKANFDPFATSIAWDDTGATTTAVTASTAGS 303 Query: 284 KPGDLVS 290 + Sbjct: 304 PSSSIDK 310 >UniRef50_A0RRQ1 Flagellar hook protein FlgE n=4 Tax=Proteobacteria RepID=A0RRQ1_CAMFF Length = 911 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 151/352 (42%), Gaps = 26/352 (7%) Query: 77 ISQNGFFRLVDSNGSVFYSRN---------GQFKLDENRNLVNMQGLQLTGYPATGTPPT 127 +++ G F + + G Y N G + + L P T Sbjct: 559 VNEKGQFVVKNPQGDAAYGENDSHLTVGAGGAVTPEGDNPLATTNPDGTVNVPVNNDTFT 618 Query: 128 IQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVF 187 + + + T + + ++SN + + ++ Sbjct: 619 NDYNMHLAITGLSDPNTNINENTKFTDVFSSLGGGLSTGTGEKTSSNIVMSSHAATTEIY 678 Query: 188 DSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSIAKTA-------TTLEFNANGT 235 DS G+ H++ + F K W + Q +T T+ F ++G+ Sbjct: 679 DSLGSKHEIKMEFRKISYSPENGTEWSMLIQVPEPGKINTETGEVANVIAGTVRFKSDGS 738 Query: 236 LVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVS 290 L+ + +N T A ++F N ++ N + Q+GY G L Sbjct: 739 LLGYSPSNLTFTANNGSAPGQNIEINFGKIGDYNGLRSNDNTSTTDNIVQDGYTAGTLNE 798 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 ++++ GT++G ++N ++ L Q+ LA F NNEGL S+G NV+ T +SG ++G+A T Sbjct: 799 LRVDESGTIIGAFTNGRSFGLAQVALAKFTNNEGLESDGGNVFVQTANSGAPVIGSAQTA 858 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G + +LE SNVDLS+ L +IV QR YQ+N++TI T DQ+LNTL+ L+ Sbjct: 859 GRGKINASSLEMSNVDLSRSLTQLIVVQRGYQANSKTITTGDQMLNTLLQLK 910 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 19/198 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A V+GL A +DV G+NIAN T GFK ASFAD+F+ + Sbjct: 4 ALWAGVTGLQAHQIAMDVEGDNIANVNTVGFKYSRASFADLFSQTAKVATAPQGDLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG ++ +T+ F G+ T + D+AI +GFF + G + Y+RNG F D Sbjct: 64 SMQIGLGTQINSVTKIFKQGSVQTTDKNTDLAIQGDGFFVVSPDGGKTYKYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ TI NI P A+ TT ++ NLNS Sbjct: 124 SLGNFVDKNGYIVQGWLRNEDTGTIDPTGPVKNIQIEPGLSTPARATTEVALIGNLNSGS 183 Query: 163 PLPTVTPFSASNADSYNK 180 + T + S Sbjct: 184 SIGTKSSPIYSLDSKNGW 201 >UniRef50_B7RBK4 Flagellar hook protein n=3 Tax=Thermotogaceae RepID=B7RBK4_9THEM Length = 623 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 144/334 (43%), Gaps = 33/334 (9%) Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNI-----SIPNTLMAAKTTTTASMQI 156 LD + N+V ++G T I G N T I + N+L A Sbjct: 289 LDSSGNVVYNGTTTVSGGSFTINDSDITAGNNYTVILLTPNNASNSLTIAPGAELVIPTS 348 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD---------NN 207 T F ++ S +V V+DS GNA+ + FV+ G+ N Sbjct: 349 GEPRFYESDNPTNFVQTDYTSPRYTTAVQVYDSLGNAYTVYYEFVRLGNTTIGSESFKNA 408 Query: 208 WQVYTQDSSD--------PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 W S A ++F+ +G + ++ + F Sbjct: 409 WIWRAYTDSGEPISLIDEDGGSGYVAGLIDFDESGRPIQYRGLDSSYNLSSGEVRTIQFD 468 Query: 260 LSFLN-----------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 Q +G + + Q+G G L S+ IN+ G ++G +SN T Sbjct: 469 AGQSGDGVVTITADFSGATQFSGDSTLNIPWQDGNPMGVLESFAINEQGEIIGTFSNGLT 528 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 +LGQI LA F N GL+ G++++ + +SGV +G G+G G L GALE SNVDL+ Sbjct: 529 DVLGQIALAVFNNPSGLSEVGNSLYVVSANSGVPKIGAPGSGGRGILIPGALEMSNVDLA 588 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +E MIVAQR +Q+NA+ I T DQILN LVN++ Sbjct: 589 EEFTKMIVAQRGFQANARVITTADQILNELVNIK 622 Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 79/325 (24%), Positives = 128/325 (39%), Gaps = 47/325 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++GL +DV+GNNI+N T GFK+ +F M A + Sbjct: 4 SLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSPQENVGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG +V+ I + T G+ NTG D+AI +GFF + D + S +Y+R G F LD Sbjct: 64 PMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGS-SYYYTRAGAFTLDS 122 Query: 105 NRNLV-NMQGLQLTGYPATGTPPT----IQQGANPTNISIP-NTLMAAKTTTTASMQINL 158 N NL+ G ++ G+ A P T I ++ I M AK T+ + NL Sbjct: 123 NGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEGNL 182 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN--------NWQV 210 N+ +T+ D G HD+ V+F KT + + + Sbjct: 183 ---------------NSKLGPGSFVITLTDENGINHDVRVWFEKTQSDLGTDPFSSSQRY 227 Query: 211 YTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNT 270 + D + A + FN G + + + + S + + Q Sbjct: 228 TMKIDIDNDGTADVDGYMVFNEFGRVEEAGVYAESQVITATTDGSISGSTALPDGTYQAI 287 Query: 271 GANNIVATTQNGYKPGDLVSYQIND 295 ++ NG S+ IND Sbjct: 288 VLDSSGNVVYNGTTTVSGGSFTIND 312 >UniRef50_C1TKJ0 Flagellar hook protein FlgE n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKJ0_9BACT Length = 875 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 10/272 (3%) Query: 141 NTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF 200 + K + T S ++ S +G T++DS GN H + V + Sbjct: 603 GANVTIKPSPTDSSKLIFTYDGTDGGDPVSSIREGSDSVHEGKGTIYDSLGNEHTLEVVW 662 Query: 201 VKTGDNNWQVYTQDSSDPN-SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 K G N W +P ++ + F++ G L+ G + GA+ A Sbjct: 663 KKVGSNAWSWEAFLPDEPELKLSDNKGVIRFSSEGKLLSGGENTISIGFSAIGADDADVV 722 Query: 260 LSFLN---------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQL 310 L F + Q A TQNGY G L + +++DGT+VG Y N Q + Sbjct: 723 LDFSGKSFDKEEIEGVTQYGSAFTTKPYTQNGYSMGILEDFSVSNDGTIVGIYDNGQNRG 782 Query: 311 LGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKE 370 L ++ LA FAN +GL G+ +S + +SG + A GT+ +LE SNVD+++E Sbjct: 783 LYKMALAMFANPQGLVKTGNTCFSKSINSGDPSIVNAMVEGAGTIAGSSLEYSNVDITEE 842 Query: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++I QR +Q++A+ I T D +L L+NL+ Sbjct: 843 FTDLITTQRGFQASARVITTSDSVLEELLNLK 874 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 89/184 (48%), Gaps = 21/184 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSG A LDV+GNNIAN T GFK T F D+ + + Sbjct: 4 SLLTGVSGAKAHQKRLDVVGNNIANVNTVGFKKSTVVFQDLLSQTERGAMAPDGNVGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 +VGLGV+VAGI T GT + TG D+AI G++ + + Y+R GQF LD Sbjct: 64 AKQVGLGVQVAGIETIHTQGTVSQTGNRTDMAIQGEGYYVVRNGA-ENLYTRAGQFVLDS 122 Query: 105 NRNL-VNMQGLQLTGYPAT-GTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSS 161 N +L ++ G ++ G T I G+ ++I+IP M AK T+T + NL+S Sbjct: 123 NSDLAMSGTGYRVQGNEMTVDEDGVISTGSELSDINIPIGRKMEAKATSTVGYRCNLDSR 182 Query: 162 DPLP 165 Sbjct: 183 VDPY 186 >UniRef50_Q1MQV7 Flagellar hook protein FlgE n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQV7_LAWIP Length = 690 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 81/407 (19%), Positives = 140/407 (34%), Gaps = 68/407 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 VSGL + ++VIGNNIAN T GFK FAD +++G GV Sbjct: 6 GMWTGVSGLLSHGEKMNVIGNNIANVNTVGFKGQRMDFADFIYQDGFSTAGITQIGRGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNLVNMQ 112 + + +F G+ T D+AI GFF++ +Y+R G F+ + + LV+ Sbjct: 66 IGAVMGNFGQGSFETTTEATDLAIGGRGFFKVKPQGSETSYYTRAGNFRFNNDGYLVDPH 125 Query: 113 GLQLTGYPATG---------------TPPTIQQGANPTNISIPNTLMAAKTTTTASMQIN 157 G L G+ I PT+I + +A TT S +N Sbjct: 126 GYALQGWKIDNTEGPQRISGGVNPGTNTSQIMGTGEPTDIRLDTWTVAPLQTTNVSFNVN 185 Query: 158 LNS---------------------SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 L+S + P+ +Y+ + S+ V+D G H + Sbjct: 186 LSSDKSGDKSQNVNSPFTSLFNIWNGKQPSEPNNPPMPESAYSYQTSIKVYDEAGGTHTL 245 Query: 197 SVYFVKTGDNNWQVYTQDSS--DPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE 254 +VYF + +++ S + + + G + A ++G Sbjct: 246 TVYFDQVSPKDYKGGGSGESVWEYVVTMDPSEDNRQVSVGGNIVDIKDTKAAGMLMSGTL 305 Query: 255 PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 S N + + A + + I+ DG I Sbjct: 306 SFDSSGKLANQSAYSLNGSRKPAVDPATGALINGNGFTIDRDGN--------------AI 351 Query: 315 VLANFANNEGLASEGDNVW-SATQSSGVALLGTAGTGNFGTLTNGAL 360 + N N +N + + ++G ++ TG G T G++ Sbjct: 352 PILNIDNPA------ENFYPAEVSNNGFPMIVANFTGVPGKNTAGSV 392 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 60/168 (35%), Positives = 91/168 (54%) Query: 235 TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 G + N + A N+ G ++ + +QNGY GDL++Y +N Sbjct: 522 NAASGILEANDPPNVKDLANMNGTPNRLSNAFTNYAGGSSTKSASQNGYGFGDLMNYSVN 581 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 +G + G YSN L Q+ L +F + +GL EG N++S T+ SG G A T FG+ Sbjct: 582 AEGVLFGVYSNGVQLPLYQVALYDFNSKQGLRREGGNLFSQTRESGDPSSGAANTSGFGS 641 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + LE SNVD+S E V+MI QR +QSN++ + T DQ+L T+VN++ Sbjct: 642 INANTLEGSNVDISTEFVSMIATQRGFQSNSKIVTTIDQMLETVVNMK 689 >UniRef50_Q485P3 Flagellar hook protein FlgE n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485P3_COLP3 Length = 554 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 90/302 (29%), Positives = 129/302 (42%), Gaps = 16/302 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F+ A+SGLNAA +LDV NNIAN T GFK A F D++A S KVG GV Sbjct: 1 MSFNIALSGLNAAQKDLDVSSNNIANVNTVGFKESRAEFVDVYASSLLAAGKTKVGDGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNM 111 A + Q F+ G+ T LD+AI+ NGFF V G Y+R GQFKL+ + +VN Sbjct: 61 TADVAQQFSQGSIQFTNNALDLAITGNGFFATVPELGSLETSYTRAGQFKLNSDNFVVNS 120 Query: 112 QGLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSD--PLPTVT 168 QG L G+P + + I IP T+ +++NL + Sbjct: 121 QGGHLLGFPVNPDGSSASVSLSTAEPIRIPTESGTPTKTSEVDVRMNLPAGAGYITSAPA 180 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG----DNNWQVYTQDSSDPNSIAKT 224 F + ++N SVT+FDS G +H M+ +FVK N W ++ P +A Sbjct: 181 NFDPEDPLTFNSSTSVTIFDSLGKSHIMTYFFVKDDPAVAPNQWMMFASVDGKPIDLADD 240 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 T + A + + + LN+ + N G Sbjct: 241 PTVQATAEAAVVTAQANVATAQASVVTSQTTLNTTQATLNTEEANVITAQATYDAIVGVP 300 Query: 285 PG 286 Sbjct: 301 TA 302 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 17/300 (5%) Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 A + T ++ + + + Q ++ +PT + A Sbjct: 255 QANVATAQASVVTSQTTLNTTQATLNTEEANVITAQATYDAIVGVPTAAQDATLAAVIAT 314 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + ++ D+ NA +S + ++ + L +N++G + Sbjct: 315 RDAAIITRDAALNAQTVSETNLTNSLAIASTAISATTPESGTGTKGARLTYNSSGDFISQ 374 Query: 240 AMANNIATG---------AINGAEPATFSLSF--------LNSMQQNTGANNIVATTQNG 282 + + T + F N Q + A Q+G Sbjct: 375 SPSPTNGGIRTVDFSSHLPNGADPTQTVKVDFNLDTAGPNPNEPTQFASNFEVTALNQDG 434 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVA 342 G L +I DG V YSN +Q L +I + NFAN +GL+ G + W + SG A Sbjct: 435 LAVGRLTGIEIGVDGLVRATYSNGTSQPLSRIAMVNFANEQGLSQTGGSNWKESLVSGKA 494 Query: 343 LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 L G AG+G FGT+ + ALE SNV+L+ EL+++I AQRN+Q+N++ ++ +Q+ T++ +R Sbjct: 495 LAGEAGSGTFGTINSSALEQSNVNLTTELIDLISAQRNFQANSRALEVDNQLNQTILQIR 554 >UniRef50_B9L651 Flagellar hook protein FlgE n=2 Tax=Nautiliaceae RepID=B9L651_NAUPA Length = 853 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 20/314 (6%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIP--------NTLMAAKTTTTASMQINLNS 160 V+ G L +I T + + Sbjct: 539 VDDSGDPLNSTTGNSGIVSINDDGQLTIKNTSSNSFNINIGGYPDEEKDNQLFTDAFSPI 598 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-------GDNNWQVYTQ 213 + + + ++ S+ VFDS G+ H ++++F KT W+ Y + Sbjct: 599 NGSVAAGGTAISQAMNAAVHTTSIDVFDSLGSKHTLTLHFRKTHTSENPNDPTVWKWYAE 658 Query: 214 DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQ 268 + ++FN +G++ + I + L F + + Sbjct: 659 VPAPSTLDQPAYGYVKFNPDGSINSYNPPSLIFNPNNGSSTGQAIQLDFGTMGKFDGITS 718 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + TQ+GY GDL ++ GTV+G ++N ++ L Q+ +A F NNEGL SE Sbjct: 719 FEAPSATSGQTQDGYPGGDLQQLVVDQTGTVIGVFTNGRSYSLAQVAIAKFVNNEGLMSE 778 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G ++SA+ +SG ++GTAGTG G++ +LE SNVDLS+ L +IV QR +Q+N++TI Sbjct: 779 GGTLFSASPNSGEPIIGTAGTGGRGSIQPSSLEMSNVDLSRSLTQLIVIQRGFQANSKTI 838 Query: 389 KTQDQILNTLVNLR 402 T DQ+LNTL+ L+ Sbjct: 839 TTSDQMLNTLLQLK 852 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 28/291 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGLNA +DV NNIAN T GFK +F ++ + + Sbjct: 4 SLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTVKSATAPQGDLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG V+ + F G+ NT + D+AI+ +GFF + G + Y+R G F D Sbjct: 64 SLQIGLGTSVSAVETMFKQGSIQNTDKNTDMAINGDGFFVVSGDGGKTYRYTRAGDFTFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSD 162 N N V+ G + G+ A TI + IS P A T+ +++ NLNS D Sbjct: 124 ANGNFVDPNGYIVQGWLADPETHTIDTASGVKPISIPPGLTTPANPTSKIAIKANLNSGD 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMS-----VYFVKTGDNNWQVYTQDSSD 217 + + ++++ G ++ + +N+ + + + Sbjct: 184 HITE---MDGTRTTVDQTADINGLYNANGEKIQLTPDVDKITLAIDANNDGTISSTEVYT 240 Query: 218 PN-SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ 267 ++T T +F L+D A A L+ + Sbjct: 241 FTYGTSQTDTDRKFTTIKDLLDEINAIIKDPTGTTPASEYQVYLNGNGQIV 291 >UniRef50_B2A353 Putative uncharacterized protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A353_NATTJ Length = 508 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 122/332 (36%), Gaps = 41/332 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL T LD IGNN+AN T GFK +F D F + Sbjct: 4 SMYSGVSGLRNHQTRLDTIGNNVANVNTAGFKGDRVTFQDAFNQTLEAASAPNERGGTNP 63 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDEN 105 +VGLG+ + + T G+ NTGR D+AI +GFF + D ++R G F +D Sbjct: 64 QQVGLGMNIGSMDTIHTQGSLENTGRDTDLAIEGDGFFVVNDGQSD-MFTRVGNFGVDSE 122 Query: 106 RNLVNM-QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 NLV+ G ++ GY I ++ + T NLNS+ Sbjct: 123 GNLVSQGTGYKVQGYAYDEDADEINTDEIVDMEIPLGDVVDPEATENVKYNGNLNSNTEP 182 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 +V VFD+ G+ H +++ F ++G+N WQ+ + + + Sbjct: 183 GETV------------STTVNVFDNLGSEHTLNLEFEESGENEWQMTVRKDG---ILIED 227 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 + F+ +G L + + F NG+ Sbjct: 228 EIQVSFSDDGELTSVGDEGTSYS----INDFEATVQDFGGLSDSAKEDLGFDIDDDNGHD 283 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 ++ + +D N + + + + + Sbjct: 284 EDNIQGMLMRND----VQAGNAEAEDVAALAI 311 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 89/140 (63%) Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L ++Q G + + ++G G+L +Y+++ G + G Y+N +T+ LGQ+VL++F N Sbjct: 368 LGDVRQVAGESTVEGVAEDGQAQGELETYEVDSAGIITGTYTNGETRQLGQVVLSDFTNP 427 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 GL G ++ T++SG G AGTG G + GALE SNVD+ ++ +MIV QR +Q Sbjct: 428 GGLEKLGSGLYQPTRNSGEPSYGIAGTGGRGEIAPGALEMSNVDMGEQFTDMIVTQRGFQ 487 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +N+++I T D++L LVNL+ Sbjct: 488 ANSRSITTGDEVLQELVNLK 507 >UniRef50_B7IDJ5 Flagellar hook protein FlgE n=2 Tax=Thermosipho RepID=B7IDJ5_THEAB Length = 704 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 103/394 (26%), Positives = 157/394 (39%), Gaps = 46/394 (11%) Query: 48 VGLGVKVAGITQD----FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 V G + I D T G +T VA +Q F NG+ S F D Sbjct: 317 VNGGNYIVEIANDVVDLQTPGYVLSTETPTSVAANQIDF----TYNGTTTSSPIKVFVRD 372 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 N NLV G GT ++ NP+ + + Sbjct: 373 GNGNLV---GEYSLNNITNGTSYSLSGVFNPSGTYTIEVVREDTVNSVVVPGSGEPRFYE 429 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ-------------- 209 T F+ S +S SV V+D+ GNA+ + + FVK N + Sbjct: 430 ADNPTNFAVSEFNSPFYTTSVQVYDTLGNAYTLYIDFVKLSANYYDGTDTFKNAWAFRVR 489 Query: 210 --------VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLS 261 + + + TA + F+ +G + G Sbjct: 490 NASGENIKYLSNYETGQEITSGTAGVMTFDESGRFTGIYAFDPSTGKVNRGESIDAIKFD 549 Query: 262 -------------FLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 L + Q ++ T QNG G L S+ I ++G ++G +SN T Sbjct: 550 AGENGDGEVKIKLNLTGITQFAATSDAYVTEQNGNAQGTLESFSIAENGDIIGTFSNGLT 609 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 LG++ LA F N GL G+++++ + +SG A++ G G G+L +GALE SNVDLS Sbjct: 610 DKLGKVALAIFNNPAGLLEAGNSLYTESANSGGAIIRQPGFGGSGSLISGALEMSNVDLS 669 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +E +I+AQR +Q+NA+ + T DQIL +VNLR Sbjct: 670 EEFTKLIIAQRGFQANARVVTTADQILQEVVNLR 703 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 126/321 (39%), Gaps = 34/321 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + V+GL +DV+GNNIAN +T GFK+ ++A F+ Sbjct: 4 SIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++G GVKVA I + + G+ NTG+ D+AI +GFF L D +G ++Y+R G F LD Sbjct: 64 PKQIGYGVKVASIDKIMSQGSFQNTGKKTDLAIQGDGFFILKDGSGKIYYTRAGNFDLDV 123 Query: 105 NRNLVN-MQGLQLTGYPATGTPPT----IQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 N LV GL+L G+ A P + + ++I I L A T+ N Sbjct: 124 NGTLVQASSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTSYMTVANNL 183 Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN 219 + P+ T + S + + G + + + S + Sbjct: 184 DARVGPSKTVMTLSGYGGNSVDVKILFDRESGALQE-------PFSDYQIYRAKVYSGSD 236 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 ++F+ G +V A A T LN++QQ+ G + Sbjct: 237 DSVDGEIYIKFDKFGNVVQSG-----AIKQSLSATATTDGSLTLNNIQQDDGNYTFIIKD 291 Query: 280 QNGYKPGDLVSYQINDDGTVV 300 NG S + + T+ Sbjct: 292 SNGSILDVQTSSVSSGNATIS 312 >UniRef50_A6W1A3 Putative uncharacterized protein n=2 Tax=Marinomonas RepID=A6W1A3_MARMS Length = 565 Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 17/291 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF--------AGSKVGLGV 52 M F+ A+SG+ A+A L V GNNIAN+ T GFK F D++ +G+ +G GV Sbjct: 1 MGFNTALSGIKASADYLSVTGNNIANADTTGFKKSRIEFDDLYNTSVLGAGSGNNIGSGV 60 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 V+ ++Q+F+ G + T LD+AI +GFF ++D+ + Y+R G FKLDEN LV Sbjct: 61 SVSKVSQEFSSGNLSYTDNNLDLAIDGSGFF-VIDAGIANAYTRAGNFKLDENGFLVTNS 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV---TP 169 G + G+ A G N ++ IP + + TT+ +++NL+S + Sbjct: 120 GNNVQGFNAVDG----VVGGNLADLKIPTDRIPPEPTTSMGLKVNLDSKNEDVPPFIKAI 175 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSIAKTATTL 228 F ++ D+YN + V D G +H ++ Y+ K N ++V+ + A Sbjct: 176 FDPNDPDTYNFTQTQGVVDGNGQSHIVTYYYAKGELPNTYKVHATVDGNLTDDAGLPFLA 235 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 E A +G N + NS+ TG +A + Sbjct: 236 ETYATFNTAEGGTDYNGDGVEEAPFSLLYVGPNEPNSVDVATGTKAPLAVS 286 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 89/320 (27%), Positives = 144/320 (45%), Gaps = 23/320 (7%) Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD 162 D N + V L +++ TL A T T + + Sbjct: 249 DYNGDGVEEAPFSLLYVGPNEPNSVDVATGTKAPLAVSGTLGGAAITATLTPEE--IRDS 306 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQVYTQDSSDPNSI 221 + + F N D+Y+ + T +DS G +H + YF+K G +N +++ + + + Sbjct: 307 SIVSREAFDPLNPDTYSYGNTRTTYDSLGESHTLGYYFIKQGENNTYELRVTMDGEESFV 366 Query: 222 AKTATT----------LEFNANGTL---------VDGAMANNIATGAINGAEPATFSLSF 262 T + F+A G L + + I+ + Sbjct: 367 DPTTGEDARYLEKNTAVSFDAAGNLMGVYRGISPLGIEQPVPLEVRGIDPTNRERITQLD 426 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN 322 L Q AN QNG+ G+L + DG ++ NY+N+QT LGQI LA F + Sbjct: 427 LAGSTQFALANT-DTFEQNGFSAGELQGVSFDSDGLLIANYTNQQTATLGQIALATFDST 485 Query: 323 EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQ 382 +GL G +W AT++SG A +G + G + GALE SNVDL+ ELV +I AQRNYQ Sbjct: 486 DGLMPSGHTMWVATKTSGPADIGRPNSATLGKIAGGALEESNVDLTAELVALIEAQRNYQ 545 Query: 383 SNAQTIKTQDQILNTLVNLR 402 +N++T++T++ + T++NLR Sbjct: 546 ANSKTLETENTVTQTIINLR 565 >UniRef50_B1XWJ5 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWJ5_LEPCP Length = 501 Score = 171 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 92/277 (33%), Positives = 139/277 (50%), Gaps = 11/277 (3%) Query: 137 ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 ++ + + ++ +++ P + SYNK S+T +D +G M Sbjct: 225 LAARDRAVTVAAQAATTVTTTADAAAAAPLAAQIDFEDPASYNKATSMTAYDVKGQPVAM 284 Query: 197 SVYFVKTGDNNWQVYTQDSSDPNSI-----AKTATTLEFNANGTLVDGAMANNIATGAIN 251 + YF K+ + W +Y + ++ T L+F +G A + Sbjct: 285 TYYFQKSAPDTWNIYATANGTSINVDASGRPVPVTQLQFPTSGAAPISPAAPVVFDVPGT 344 Query: 252 GAEPATFSLSFLN------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSN 305 A + + Q ++ TQNGY PG++ S + +G + YSN Sbjct: 345 TAADGSTTEPITGVSFDFTQATQYGATFSVTDLTQNGYAPGEMSSLNVESNGIITARYSN 404 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 T+ GQI +ANF N +GL + G N W++T +SG A +GT +GNFG L +G+LE SNV Sbjct: 405 GLTKSAGQIEVANFRNPQGLQAVGGNAWASTFASGSATVGTPDSGNFGQLQSGSLEDSNV 464 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 DL+ ELVNMI AQR YQ+NAQTIKTQD +L TLVNL+ Sbjct: 465 DLTAELVNMITAQRVYQANAQTIKTQDSVLQTLVNLK 501 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 87/325 (26%), Positives = 138/325 (42%), Gaps = 13/325 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F Q +SGLNA + NL+VIGNN+AN+ TYG K+ A FADM+A + VG+GV+ Sbjct: 1 MNFQQGLSGLNATSKNLEVIGNNVANANTYGTKASRAEFADMYASTINNIGTGNVGIGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 VA ++Q FT G+ + T LD+AI+ GFF++ D+ G+ Y+RNGQFKLD+ +VN G Sbjct: 61 VAAVSQQFTQGSLSATDNPLDMAINGAGFFQVKDTAGNQLYTRNGQFKLDKEGFIVNNSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L GYPA + + +P +A T M++NL+S L T + Sbjct: 121 QKLLGYPANADGVVVP--GAAGALQLPTAGIAPMATDEVKMEMNLDSRGVLTDPTAVANK 178 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA---KTATTLEF 230 A + Q + A + Sbjct: 179 AAADAVTAQAAADAAVVTTQAAYDTAQANADAAPADTRLQSLATAALAARDRAVTVAAQA 238 Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 T A A I+ +PA+++ + + G + P + Sbjct: 239 ATTVTTTADAAAAAPLAAQIDFEDPASYNKATSMTAYDVKGQPVAMTYYFQKSAPDTW-N 297 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIV 315 +GT + ++ + + Q+ Sbjct: 298 IYATANGTSINVDASGRPVPVTQLQ 322 >UniRef50_Q72C41 Flagellar hook protein FlgE n=3 Tax=Desulfovibrio vulgaris RepID=Q72C41_DESVH Length = 564 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 72/351 (20%), Positives = 122/351 (34%), Gaps = 55/351 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL A ++V+GNNIAN T GFK F D ++VG GV Sbjct: 6 SMWTGVSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQVGRGVS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-SNGSVFYSRNGQFKLDENRNLVNMQ 112 + I D++ G T D+AI GFF + +Y+R G F+ D + LV+ Sbjct: 66 IGAIFGDYSQGAFQTTNESTDLAIQGRGFFSVKPKGTEDTYYTRAGNFRFDADGYLVDPH 125 Query: 113 GLQLTGYP--------------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINL 158 G L G+ AT T I+ P +I + + T ++ +NL Sbjct: 126 GYVLQGWAIERSQNSLTSSAVTATSTTSKIKGSGVPVDIKLDGFTAEPQHTQNITLNVNL 185 Query: 159 NS---------------------SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMS 197 +S + P A ++ + ++ V+D G AH ++ Sbjct: 186 DSNPGNDKSSSTTNPYFSLFETWNGQNPLTGTQPALAQSAFAYQSTIKVYDEAGTAHTLT 245 Query: 198 VYFVKTGDNNWQVYTQ-----------DSSDPNSIAKTATTLEFNANGTLVDGAMANNIA 246 VYF + ++ D ++ + A G L+ G + + Sbjct: 246 VYFDQVDPDSVTNEPNGRKQWEYIVTMDPAEDKRVIAGTAMNTTRAAGLLMTGTLTFDTT 305 Query: 247 TGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 ++ F + N N + Q++ +G Sbjct: 306 GQLVDQTAFTPFGQYTDTTPPWNEPTPNPGPPVTTPADLVNWQPTQMSSNG 356 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 105/285 (36%), Gaps = 4/285 (1%) Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADS 177 G T L+ T + PT P + Sbjct: 283 GTAMNTTRAAGLLMTGTLTFDTTGQLVDQTAFTPFGQYTDTTPPWNEPTPNPGPPVTTPA 342 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLV 237 T S G + + N + + L T Sbjct: 343 DLVNWQPTQMSSNGLPMMV----ANFSGLTDSSVVGSPTAQNFLMELDLGLRSTNATTPW 398 Query: 238 DGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 + T S ++ G+++ Q+GY G L + ++ DG Sbjct: 399 TSTPNAAAIGTDASLLPGLTSSQRQPSATTSYAGSSSTQFQKQDGYTFGFLQNITVDRDG 458 Query: 298 TVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTN 357 + G YSN T L Q+ L +F + + L EG N++S T+ SG L G A + G +++ Sbjct: 459 IMQGKYSNGVTLDLYQVTLVDFTSKQNLRREGGNLFSGTRDSGDPLPGPANSNGLGAISS 518 Query: 358 GALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +LE SNVDL++E V MI QR +QSN++ I T D +L +VN++ Sbjct: 519 NSLEQSNVDLAREFVEMITTQRGFQSNSKVITTTDTMLEVVVNMK 563 >UniRef50_D2C6I0 Fagellar hook-basal body protein n=3 Tax=Thermotoga RepID=D2C6I0_THENR Length = 755 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 96/334 (28%), Positives = 144/334 (43%), Gaps = 33/334 (9%) Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNI-----SIPNTLMAAKTTTTASMQI 156 LD + N+V ++G T I G N T I + N+L A Sbjct: 421 LDSSGNVVYNGTTTVSGGSFTINDSDITAGNNYTVILLTPNNASNSLTIAPGAELVIPTS 480 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD---------NN 207 T F ++ S +V V+DS GNA+ + FV+ G+ N Sbjct: 481 GEPRFYESDNPTNFVQTDYTSPRYTTAVQVYDSLGNAYTVYYEFVRLGNTTIGSESFKNA 540 Query: 208 WQVYTQDSSD--------PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 W S A ++F+ +G + ++ + F Sbjct: 541 WIWRAYTDSGEPISLIDEDGGSGYVAGLIDFDESGRPIQYRGLDSSYNLSSGEVRTIQFD 600 Query: 260 LSFLN-----------SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT 308 Q +G + + Q+G G L S+ IN+ G ++G +SN T Sbjct: 601 AGQSGDGVVTITADFSGATQFSGDSTLNIPWQDGNPMGVLESFAINEQGEIIGTFSNGLT 660 Query: 309 QLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLS 368 +LGQI LA F N GL+ G++++ + +SGV +G G+G G L GALE SNVDL+ Sbjct: 661 DVLGQIALAVFNNPSGLSEVGNSLYVVSANSGVPKIGAPGSGGRGILIPGALEMSNVDLA 720 Query: 369 KELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +E MIVAQR +Q+NA+ I T DQILN LVN++ Sbjct: 721 EEFTKMIVAQRGFQANARVITTADQILNELVNIK 754 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 78/380 (20%), Positives = 138/380 (36%), Gaps = 42/380 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + ++GL +DV+GNNI+N T GFK+ +F M A + Sbjct: 4 SLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVGGTN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLG +V+ I + T G+ NTG D+AI +GFF + D + S +Y+R G F LD Sbjct: 64 PMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGS-SYYYTRAGAFTLDS 122 Query: 105 NRNLV-NMQGLQLTGYPATGTPPT----IQQGANPTNISIP-NTLMAAKTTTTASMQINL 158 N NL+ G ++ G+ A P T I ++ I M AK T+ + NL Sbjct: 123 NGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEGNL 182 Query: 159 NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 N+ +T+ D G HD+ V+F KT + S Sbjct: 183 ---------------NSKLGPGSFVITLTDENGINHDVRVWFEKTQSDLGTDPFSSSQRY 227 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 + +G +V G ++ T ++ + + G + Sbjct: 228 TMKIDIDNDGTADVDGYMVFNEFGRVEEAGVYAESQTMT-AIGISGTTTLSDGTYQTIVL 286 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +G G+ + + + ++L + + + + + S T + Sbjct: 287 DSSGNVV--YNGTTTVSSGSFTISDPDIVSGNNYTVILYSADDTRNVTASSNGSISDTTT 344 Query: 339 SGVALLGTAGTGNFGTLTNG 358 + G + Sbjct: 345 LSDGTYQAIVLDSSGNVVYN 364 >UniRef50_C1DC21 Flagellar hook protein FlgE n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DC21_LARHH Length = 526 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 105/331 (31%), Positives = 147/331 (44%), Gaps = 23/331 (6%) Query: 85 LVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLM 144 + +G + G + L N G + A G P + + + Sbjct: 206 VKLPDGRYVIT--GTSGTTQVGQLFNADGTPI--NDAAGAPTFYDKKLGWLDAAGTVQQY 261 Query: 145 AAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG 204 TT A + + F+ S+ +YN K ++T +DS GN ++VYF KT Sbjct: 262 TPNATTPAGAAGTIAAVSIA-----FNPSDPATYNSKTALTAYDSLGNPIQVAVYFKKTA 316 Query: 205 DNNWQVYTQDSSDPNSI-------------AKTATTLEFNANGTLVDGAMANNIATGAIN 251 D W VY S+ T L F +G L +G Sbjct: 317 DGQWDVYATAKHTDGSVVDLGTGNTAASPYTALGTGLAFGPDGKLTNGGPIAAATYTPAG 376 Query: 252 GAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLL 311 G P F S Q + + Q GY + + QI+ G V YSN QT+++ Sbjct: 377 GGAPLALKFDFSGS-TQFGTSFAVNELVQPGYASAVVSNLQIDKTGIVSARYSNGQTKVI 435 Query: 312 GQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKEL 371 GQ+VLANFAN +GL G+N W T +SG L G+ N G + + ALE SNVDL+ EL Sbjct: 436 GQVVLANFANQQGLQPIGNNRWMETYNSGNPTLNDPGSTNVGLIQSQALEDSNVDLTGEL 495 Query: 372 VNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 VNMI AQR YQ+NAQTIK DQ+L +L+ +R Sbjct: 496 VNMITAQRYYQANAQTIKVHDQVLQSLMQMR 526 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 90/341 (26%), Positives = 138/341 (40%), Gaps = 31/341 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 MAF +SG+NAA+ LD IGNN+ANS+T GFK A FADMF A ++ G+GV Sbjct: 1 MAFQHGLSGINAASKQLDAIGNNVANSSTVGFKGSRAEFADMFAANFYGVAATQNGIGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 I Q F G T TG LD+AIS NGFF + ++NG + Y+RNGQF++D + N G Sbjct: 61 TTLIAQQFGQGNITTTGNQLDLAISGNGFFVMQNANG-ISYTRNGQFQIDREGYI-NNNG 118 Query: 114 LQLTGYPATG-TPPTIQQGANPTNISIPNTLMAAKTTTT----ASMQINLNSSDPLPTVT 168 +L G+ T P Q N + I N+L+ + + INL+S + Sbjct: 119 DKLMGWQVDDRTTPPSVQNGNLGPLKIDNSLLEPRPSDYGGESMRFNINLDSRNNPVEYN 178 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSV----YFVKTGDNNWQVYTQDSSDPNSIAKT 224 + + + + + + + Y + QV ++D I Sbjct: 179 ALTEGASLTGVTTLAPPATADFNASTKVKLPDGRYVITGTSGTTQVGQLFNADGTPINDA 238 Query: 225 ATTLEF--------NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 A F +A GT+ GA + + + + + Sbjct: 239 AGAPTFYDKKLGWLDAAGTVQQYTPNATTPAGAAGTIAAVSIAFNPSDPAT-YNSKTALT 297 Query: 277 ATTQNGYKPGDLVSYQINDDGT----VVGNYSNEQTQLLGQ 313 A G V ++ DG +++ LG Sbjct: 298 AYDSLGNPIQVAVYFKKTADGQWDVYATAKHTDGSVVDLGT 338 >UniRef50_C8QYQ3 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYQ3_9DELT Length = 806 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 12/295 (4%) Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 PP++ A + + I+ T+ SN ++ Sbjct: 511 TTDTDPPSLISAATRWDAVYVDGNPDPAIDFDGDPAISYAIMTRDGTLLEGEYSNFEASP 570 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA------------TT 227 D N +D+ Y TG + D + Sbjct: 571 DSTVQGFLDHLSNEYDVDAYIDNTGRLVIRDRVADPGGDEASQLNFRIMAYTDMEEIFGP 630 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 + + G + + A F + Q ++ + QNG+ G Sbjct: 631 ADMDDFGDFHVISGSPERNGSQTGTAVDNRFGDTEAMFTTQYANSSTTIYQDQNGFAAGF 690 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 L S ++ G + GN+SN Q + ++ LA+FAN +GL G N++ AT SG + G Sbjct: 691 LQSVSVDTAGIITGNFSNGQVLMQAKVALADFANLQGLHKVGGNIFRATTQSGAPVTGEP 750 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GT G + +LE SNVDL E V MI QR +Q+N++ I T D++LN L+N++ Sbjct: 751 GTNGLGEIAPNSLEMSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELINIK 805 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 127/343 (37%), Gaps = 55/343 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL+ + V+G+NIAN T F S ++F D+ + S +VG GV Sbjct: 6 SLYAGISGLSTMGNGMSVLGDNIANVNTVAFNSSRSTFQDVLSQSVSTAAGTAQVGRGVT 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF--YSRNGQFKLDENRNLVNM 111 + + F G+ +T D+AI GFF L + + ++R G+F+ D++ L + Sbjct: 66 LTTVDGLFAQGSFESTSTPTDMAIGGEGFFMLRGGDSAEADMFTRAGEFRFDQHGFLTSP 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP------ 165 G + G+ I+ +I + T + +NL++ Sbjct: 126 GGHFVQGWSVDKNTGQIE--GTIGDIRMD-RSTPPVQTEQIDLIVNLDARVDQASASTLY 182 Query: 166 ---TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-DNNWQ------------ 209 T A +Y S+ V+DS+G A D+++YF +T +N W+ Sbjct: 183 DSWNGTADDPIAATNYQYTTSLKVYDSKGVARDVTIYFDRTAKENEWEFLVTSDPAADRR 242 Query: 210 ---------------VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAE 254 Q+ + + A + F+ NG + + A G ++ Sbjct: 243 ELSEAEKQTYAPDEQYNYQNPAHRGAGALMYGKINFDNNGNITTIDTWDVPADGRVDPDR 302 Query: 255 PATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDG 297 S +S G + G +++ DG Sbjct: 303 TTNRSNRLDDS-----GNYPVFDANFTGDPQTIALNFGARSDG 340 >UniRef50_Q9ZKY0 Flagellar hook protein flgE n=23 Tax=Helicobacteraceae RepID=FLGE_HELPJ Length = 718 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 87/279 (31%), Positives = 135/279 (48%), Gaps = 13/279 (4%) Query: 137 ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 +S ++ + LN++ + S+S S+ V DS G H M Sbjct: 439 VSGYSSDSVTNNVLFKNAMKGLNTASLIEGGASASSSKFTHATHATSIDVIDSLGTKHAM 498 Query: 197 SVYFVKTGDNNWQVYTQDSSDPNSIAKT--------ATTLEFNANGTLVDGAMANNIATG 248 + F ++G W + + L FN +G+L Sbjct: 499 RIEFYRSGGAEWNFRVIVPEPGELVGGSAARPNVFEGGRLHFNNDGSLAGMNPPLLQFDP 558 Query: 249 AINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNY 303 P +L+F + + + A QNGY+ GDL+ + + DG ++G + Sbjct: 559 KNGADAPQRINLAFGSSGSFDGLTSVDKISETYAIEQNGYQAGDLMDVRFDSDGVLLGAF 618 Query: 304 SNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEAS 363 SN +T L Q+ LANFAN+ GL + G NV+S T +SG AL+G A TG G+++ LE+S Sbjct: 619 SNGRTLALAQVALANFANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESS 678 Query: 364 NVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 NVDLS+ L N+IV QR +Q+N++ + T DQILNTL+NL+ Sbjct: 679 NVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNLK 717 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 30/222 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + V+G+ A LD+ NNIAN T GFK ASF DM + K Sbjct: 4 SLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGLAGQ 63 Query: 48 ----VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKL 102 VGLGV V T+ F+ G NT D+AI +GFF + G ++R+G+F Sbjct: 64 NDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGEFLF 123 Query: 103 DENRNLVNMQGLQLTGYPATGTPP----------TIQQGANPTNISIP-NTLMAAKTTTT 151 D +LV GL + G+ G+ + NI I +M A+ + Sbjct: 124 DSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARASNR 183 Query: 152 ASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNA 193 SM+ NLN+ A ++ + + G Sbjct: 184 ISMRANLNAGRHADQTAAVFALDSSAKTPSDGINPVYDSGTN 225 >UniRef50_Q48GC1 Flagellar basal-body protein, putative n=6 Tax=Pseudomonas syringae group RepID=Q48GC1_PSE14 Length = 586 Score = 167 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 30/316 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F+ A+SG++AA L+V GNNIANS T GFKS A F+ +++ S+ VG GV+ Sbjct: 1 MSFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVR 60 Query: 54 VAGITQDFTDG-TTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQ 112 +A + Q+F G + T +G LD+ I NGFF + D GS+ Y+R G F D +V+ + Sbjct: 61 LASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDG-GSLAYTRAGAFLKDAANFVVDSE 119 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS-DPLPTVTPFS 171 G +L GY A + T++ I + ++A+ TT + INL++S L + F Sbjct: 120 GGRLQGYAANEQGEIKR--GLRTDLQIDTSNVSARATTRVAENINLDASLPSLARLPVFD 177 Query: 172 ASNADSYNKKGSVTVFDS---------QGNAHDMSVYFVKTGDNNWQVYTQDSS----DP 218 ++ +Y + T+ D+ + H++ YFVKTGD+ W +Y DP Sbjct: 178 PADPATYTRAVGRTIQDAGSGAGATAVPASDHELKQYFVKTGDSQWSMYVLIDGRNPVDP 237 Query: 219 NSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 NS+A TLE NG+L + ++ F+L ++ GA Sbjct: 238 NSVAPLHVTLEQRPNGSLSYSGNSQHL-----RKVSDTEFALQGWRPAEEVGGAWVSNGA 292 Query: 279 TQNGYKPGDLVSYQIN 294 G L + I+ Sbjct: 293 ANGGTVSLPLNNGSIS 308 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 36/323 (11%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 V+ L G+ N + + + + L V Sbjct: 267 VSDTEFALQGWRPAEEVGGAWVSNGAANGGTVSLPLNNGSISMLDPGDALMDR----PVP 322 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----QDSSDPNSIAKT 224 F S+ +Y+ + +FDSQGN H++ YFVK G N+W+++ ++ P+S Sbjct: 323 AFDPSDLKTYSDMFANAIFDSQGNQHELKQYFVKDGTNSWRIHALIDGRNPQMPDSTDPL 382 Query: 225 ATTLEFNANGTLVDGAMANNIATG---------------------------AINGAEPAT 257 + F++ G + A+ Sbjct: 383 TANIVFDSGGWVQSLTGGPGFASTHSNGLQLTGWTPAMPAERVTGPEKWVPNGAAGSAKG 442 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 ++ F N + Q+ A++ +T +G+ G L S + DG + ++N + +GQ++LA Sbjct: 443 ITIDFTN-LLQHNAASSRSSTHVDGHAAGQLSSLSVGRDGILRAGFTNGMNKNIGQVILA 501 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 +FAN +GL + D W+ + SGVA +G G G+L LE SNV L+ EL+ +I A Sbjct: 502 SFANPQGLQARSDTRWTESADSGVADYDVSGVGTLGSLIGDGLEGSNVVLADELIALIQA 561 Query: 378 QRNYQSNAQTIKTQDQILNTLVN 400 Q YQ+N++ I T+ ++ TL+ Sbjct: 562 QTAYQANSKAISTEATVMQTLIQ 584 >UniRef50_Q2BQT8 Flagellar hook protein (FlgE)-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQT8_9GAMM Length = 634 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 112/239 (46%), Gaps = 13/239 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVG--------LGVK 53 F+ AV+GL AA+T+LDVIGNNIANS+T GFK+ F D++A + VG GV Sbjct: 3 GFNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSGVT 62 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V+ I QDF GT T LD+AI+ +GFF+L D G ++R G F+LD++ +V+ G Sbjct: 63 VSDIAQDFQAGTIEFTNNNLDLAINGSGFFQLDDGQGGTTFTRAGAFQLDKDGFIVSKSG 122 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLN-SSDPLPTVTPFSA 172 L GY + G N+++ K T + N++ DP P+ Sbjct: 123 KFLQGYGLDDQGNRLPIG----NLAVSQKESPPKATEDIDLSFNIDSREDPTTLTFPYDK 178 Query: 173 SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 S+ +V FDS GN H + V+ +S I+ Sbjct: 179 DTPASFTYSTTVRTFDSLGNEHTIKYNMVERRPTKDVYSVTTASTAVRISGVTVDPTDG 237 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 1/282 (0%) Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 PA + I G+ ISI S I++ + + + + Sbjct: 354 PAIESVSVIDAGSGNYQISIRFKAEQGN-INPTSYPISITPTGYTGMSLNSTVDGDNGFQ 412 Query: 180 KKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDG 239 + + + D+ T+ ++ L + T G Sbjct: 413 GMYRLYAYLNGTELLDIGKVEDPGEPGAPAGNTEVGPILLEFNPSSGLLRGINDVTFTSG 472 Query: 240 AMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTV 299 A A +I + A AT L Q A+ + ++TQ+GY GDL+ ++ G + Sbjct: 473 ATAPSITVSGADPANNATTITLDLTGTTQFASASIVKSSTQDGYTKGDLIGVSFSETGEM 532 Query: 300 VGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 V ++SN Q Q LG + +A F N GL GD W+AT +SG A++ GTG GTL + A Sbjct: 533 VASFSNGQNQDLGVVAIATFENQSGLQPSGDTEWTATLTSGDAIVNPPGTGLNGTLRSAA 592 Query: 360 LEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 LE SNVDLS ELV +I AQRN+Q+N++TI+TQ+ + ++ + Sbjct: 593 LEQSNVDLSAELVALIEAQRNFQANSKTIETQNTVTQAILQI 634 >UniRef50_C0QAJ6 FlgE n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAJ6_DESAH Length = 901 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 35/311 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + SGL + V+GNNI+N T GFK G ++FAD + S +VG G+ Sbjct: 6 SLFTGTSGLTNMGNAMQVVGNNISNVNTVGFKKGRSTFADTLSQSVATQSGTDQVGRGMS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS-VFYSRNGQFKLDENRNLVNMQ 112 + + Q F G+ +TG D++I +GFF + SN FY+R G F D++ LVN + Sbjct: 66 IGAVDQSFDTGSFESTGNSTDLSIGGDGFFVVRQSNSENNFYTRAGNFHFDKSGQLVNPE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 + G+ +I + + K ++T SM NL+S TV ++ Sbjct: 126 SYLVQGWALDEDTGE--DIGAINDIVLNAFTSSPKQSSTVSMITNLDSDAESQTVVLSNS 183 Query: 173 S--------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 ++ +Y + V V+D+ G+ HD++VY+ K +W+ ++ Sbjct: 184 WDSGETTYMDSTNYEYQSVVKVYDALGSTHDVTVYYDKKTGTDWEYVVTCDPSEDNRNLV 243 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 +T ++ G L G ++ + ++G I F+ I NG Sbjct: 244 EST---DSKGLLARGTISFSESSGDILKVTMEEFT-------------GRIGNVQANGVN 287 Query: 285 PGDLVSYQIND 295 D ++++I++ Sbjct: 288 NEDAINFEIDN 298 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 6/205 (2%) Query: 198 VYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPAT 257 + F G W+ + D D T G+ I Sbjct: 703 ITFDILGSTAWREQSVDEIDKTGYFAFNTDFLGGEFGS------TEFSIELDIGTRYDGI 756 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 ++ S Q ++N V +GY GDL + DG + G YSN Q L ++ LA Sbjct: 757 NFINDSLSSTQYARSSNTVYQDADGYSAGDLQGVDVASDGIMTGVYSNGQLIPLFRVGLA 816 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 F NN GL++ G N++S T+ SG A+ G GT++ +LE SNVD+S+E V MI Sbjct: 817 KFLNNNGLSNSGGNLFSETRDSGSAITNKPGENGLGTISPNSLEMSNVDISEEFVKMITT 876 Query: 378 QRNYQSNAQTIKTQDQILNTLVNLR 402 QR +Q+N++TI T D+++ T++N++ Sbjct: 877 QRGFQANSKTITTVDEMMQTVINMK 901 >UniRef50_Q5HS69 Flagellar hook protein n=15 Tax=Campylobacter RepID=Q5HS69_CAMJR Length = 845 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 112/299 (37%), Gaps = 20/299 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNI+N T GFK A F MF+ + Sbjct: 4 SLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGGSN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLD 103 ++GLGV V+ T+ + G+ T + DVAI+ +GFF + D G Y +R+G FKLD Sbjct: 64 PLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDFKLD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNI-SIPNTLMAAKTTTTASMQINLNSSD 162 N VN G + G+ TI +P NI P + A +T +++ NLNS Sbjct: 124 AYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLNSGL 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + T + + + + + + Y D+ + Sbjct: 184 NIGTSSRNLYALDSVHGWNNKTQRPEDENDTGTTQFYTTSKNSVEVTEKGVDAGSLFNAN 243 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQN 281 T L + G V A A N + + N +N V Sbjct: 244 GTGLNLR-DGQGIWVSYADAKFTTDKPANVNVFDPNNHTNQNGSIFWGDKDNTVNLDIT 301 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 86/325 (26%), Positives = 138/325 (42%), Gaps = 24/325 (7%) Query: 102 LDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-----NTLMAAKTTTTASMQI 156 + EN N + + PA Q NP N+S N T + Sbjct: 520 VTENGNFAISNANETSTIPANAGAGNTQVTTNPKNMSFNITAYSNKQGTVSTNDAFAKIF 579 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKT-----GDNNWQVY 211 + + ++DS G+ H + V FVK G N WQ+ Sbjct: 580 KAFDGVLTVGGQIKESEQLKLSAFSAGLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMI 639 Query: 212 TQDSSDPNSIAKT-------ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL- 263 + T FN +G+L + + A LSF Sbjct: 640 IRVPEPAEINTTGEGPTNIIVGTARFNNDGSLANYTPKTINFSPNNGAAPNQQIKLSFGT 699 Query: 264 ----NSMQQNTGANNIVATTQNGYKPGDL--VSYQINDDGTVVGNYSNEQTQLLGQIVLA 317 + + + A+ + +GY G+L + +++D G ++G ++N +T + +I +A Sbjct: 700 SGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAMA 759 Query: 318 NFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVA 377 + ANN GL G N++ T +SG ++G AGTG G + ALE SNVDLS+ L +I+ Sbjct: 760 SVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIII 819 Query: 378 QRNYQSNAQTIKTQDQILNTLVNLR 402 QR YQ+N++TI T DQ+L TL+ L+ Sbjct: 820 QRGYQANSKTISTSDQMLQTLIQLK 844 >UniRef50_Q1JZT1 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZT1_DESAC Length = 548 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 82/309 (26%), Positives = 124/309 (40%), Gaps = 18/309 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + VSGLNA L V+GNNIANS T GFKS F+D+ + S+VG G Sbjct: 6 SLFSGVSGLNANGNALTVLGNNIANSNTIGFKSSRTIFSDLLSAEIAGSGGASQVGRGAG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 ++ + F+ GT T D+AI GFF + D S++Y+R G F DE LVN + Sbjct: 66 LSTVDNIFSQGTFETTESNTDLAIEGPGFFMVSDPGEASIYYTRAGAFNFDETGTLVNPE 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G + GY T+ + T + + T + + +N N S Sbjct: 126 GYAVQGYYLNDAGETVGDLTDLTIETRSFSPANPTTKISLATNLNANDPYLGTQGDAVSP 185 Query: 173 SN----ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--NNWQVYTQDSSDPNSIAKTAT 226 + AD+ N SV +FDS G H ++ YF K N V +S S ++ + Sbjct: 186 FDVNDPADTSNYASSVRIFDSLGREHLVTTYFNKLDPENNPDGVMQWESHTVVSESEVES 245 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 + A+ ++ A A + A A N+ A Sbjct: 246 PAKIAADDAALELAKATEVTALADLTAAQTALDADPTNAALIAARDAAQTAYD---AANA 302 Query: 287 DLVSYQIND 295 L + +I+ Sbjct: 303 ALQTAEIDA 311 Score = 154 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 3/281 (1%) Query: 124 TPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGS 183 T Q A + + + A TA N + + Sbjct: 268 ADLTAAQTALDADPTNAALIAARDAAQTAYDAANAALQTAEIDAADWVEVGRSILSFDTG 327 Query: 184 VTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMAN 243 + + + +S + + + N+ + L Sbjct: 328 GRLVNVLDVSDTISDGPLPDSERVYDPDGNLYVTSNTTDPDGNYYPLTTDVDLKVPQPTA 387 Query: 244 NIATGAINGAEP--ATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 + +GA++ T ++ + Q + +++++ TQ+GY G LVS +++DG ++G Sbjct: 388 STVSGALSWINEAEDTQAVDIIFDATQYSSESDVISQTQDGYATGTLVSLTVDNDGNILG 447 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 NYSN + + L +I LA F+N GLA G+N++ AT SG A++GT G+ G + +LE Sbjct: 448 NYSNGEPRKLARIALAKFSNPVGLAKAGNNLYEATDDSGTAIVGTVGS-GVGKIFTNSLE 506 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDL++E V MI QR +Q+N++ I T D++L L+NL+ Sbjct: 507 MSNVDLAQEFVKMITTQRGFQANSKIITTTDELLGELINLK 547 >UniRef50_B8DS27 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS27_DESVM Length = 525 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 137/317 (43%), Gaps = 34/317 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +VSGL + A ++ VIGNN+ANS+T G+KS + F D+F S ++G G Sbjct: 6 SMYASVSGLLSTAESISVIGNNLANSSTTGYKSMSMLFEDVFYSSITTSGGIDQIGNGSA 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDENRNLVNM 111 ++ I+ DF+ G+ +T +++AI+ G+F + D +G ++Y+R G F + LVN Sbjct: 66 ISAISTDFSQGSYQDTSEAMNMAIAGEGYFIVEDPQNDGQIYYTRAGDFTFNTEGYLVNS 125 Query: 112 QGLQLTGYPATGTPPTIQQG---ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 G Q+ G+ + ++ + + A TT ++ +NL+S + + Sbjct: 126 SGYQVQGWAVDPDTASSTDPSTTGALGDVQLKSRTSPASATTNVTLTVNLDSGGDDNSTS 185 Query: 169 PFSASNA---------------DSYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNW 208 + Y + ++TV+D G+AH+++VYF + TG W Sbjct: 186 TTDPYFSLLTEWDGSADDPLGTTKYEYQTTITVYDEAGSAHELTVYFDQVEDSATGSTTW 245 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQ 268 + + + ++ + L+ + ATGA+ T + + Sbjct: 246 EYLVTMNPSEDVRTIGGQSVSGTSAAGLLMAGTLSFDATGALVSQTAFTLGSTASGDLTD 305 Query: 269 NTGANNIVATTQNGYKP 285 + + + +G Sbjct: 306 LSN-WTLAELSTDGLPV 321 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 5/194 (2%) Query: 214 DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPA-----TFSLSFLNSMQQ 268 ++S + L+F + + + + + A G + T + + Sbjct: 331 NASTTDEADAIQVELDFGLSAKSITDSWNTTVTSAADIGTDGTLLFGFTSTAYDTDRTTS 390 Query: 269 NTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASE 328 + A++ +++QNGY G L SY +++ G + YSN QTQ L + LA+F N++GL E Sbjct: 391 HDSASSTDSSSQNGYATGYLTSYYVDEGGVIYATYSNGQTQALFIVALASFNNDQGLQLE 450 Query: 329 GDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTI 388 G N++SAT SG A +G AG G +G++ LE SNVD+S E+V++IV QR YQ+N++ I Sbjct: 451 GGNLYSATTESGTANIGRAGQGIYGSIYGEKLEESNVDVSTEMVDLIVMQRAYQANSKVI 510 Query: 389 KTQDQILNTLVNLR 402 T D++L T + L+ Sbjct: 511 TTVDEMLQTALGLK 524 >UniRef50_C7LRK3 Putative uncharacterized protein n=2 Tax=Desulfovibrionales RepID=C7LRK3_DESBD Length = 562 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 49/329 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + SGL A ++ VIGNNI+N +T GFK F D + +VG GV Sbjct: 6 SLYSGTSGLKAHGEDMTVIGNNISNVSTIGFKGSRMYFEDALSQQITTASGSGQVGRGVS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLDENRNLVNMQ 112 V + DF+ G+ +T D+AI NGFF + + V +Y+R G F+ DE LV+ + Sbjct: 66 VGTVMGDFSQGSLESTTEATDLAIGGNGFFMVSPAGQEVNYYTRAGNFRFDEEGYLVDPR 125 Query: 113 GLQLTGYPATGTPPTIQQGAN--------------PTNISIPNTLMAAKTTTTASMQINL 158 G +L G+ + + P ++ + N + T+ + +N+ Sbjct: 126 GYRLQGWEVQQANTSAAASGDTTAQATTGVQILGVPQDVKLENFQSPPQATSRVDLILNV 185 Query: 159 NSSDPLPTVTPFSASNA---------------DSYNKKGSVTVFDSQGNAHDMSVYFVKT 203 +SS +V+P A SY + ++ V+D G++H+M+VY Sbjct: 186 DSSSEDKSVSPTDPFTALFDTYDATAAEPIGEASYAYQTTIKVYDENGSSHNMTVYMDPV 245 Query: 204 GDNNWQ--------VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEP 255 + + P + G L+ G + N A N + Sbjct: 246 ANVEVTGAAAGKRYWEYIIAVPPGEDNRDFWGAGDEKRGILMSGTLTFNAAGELENMSA- 304 Query: 256 ATFSLSFLNSMQQNTGANNIVATTQNGYK 284 F+++ L + + + +QNGY Sbjct: 305 --FTVNDLTADPELPASWVPANFSQNGYP 331 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 8/281 (2%) Query: 123 GTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK 181 T N+S + A AS S + P T A+ Sbjct: 288 SGTLTFNAAGELENMSAFTVNDLTADPELPASWVPANFSQNGYPICTANFLGAANGSTTG 347 Query: 182 GSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAM 241 + +++ V+ ++W+ + +D + Sbjct: 348 SGILAESENTKNIEINFG-VRNKTSSWEPGPAIPPAAATGQDNLGDYPT------IDTSG 400 Query: 242 ANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG 301 A + G++ + S + + + Q+GY G L + ++ DG + G Sbjct: 401 ATPVLVGSLGAINGFASTEISALSSTNYSTGSTTIFQAQDGYTAGFLQNISVDRDGVITG 460 Query: 302 NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE 361 YSN Q L + LA F NN L EG N++S T+SSG + G A TG G++ + +LE Sbjct: 461 RYSNGQVLQLFAVTLATFNNNYALYREGGNLFSETRSSGPPITGLANTGGKGSIASNSLE 520 Query: 362 ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDL+ E V MI ++ +Q+N++TI T DQ+L L+ L+ Sbjct: 521 QSNVDLATEFVKMITTEKGFQANSKTITTVDQMLTVLIQLK 561 >UniRef50_Q4JMN8 Predicted flagellar hook protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMN8_9BACT Length = 1387 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 17/314 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F A++GLN ++ ++ NNIAN T GFK F D+F A S +G G Sbjct: 1 MSFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNASSSIGSGTI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + GI Q FT G + LD+AIS GFF L ++ Y+RNG ++ +R +V+ Sbjct: 61 LKGIKQQFTQGNIAASLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVNNDRYVVDS 120 Query: 112 QGLQLTGYPATGTPPTIQQG-ANPTNISIPNTLMAAKTTTTASMQINLNSSDPL------ 164 G L YP + + + +P T + T+ + +N+N++ + Sbjct: 121 AGQFLLTYPVNTDGSVTAKDLDSAVPLQLPVTSGDPQATSNIKLGVNVNAASDVVTDRPQ 180 Query: 165 -PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 F ++ +++ S+T+FD GN +VYF+KT + T I Sbjct: 181 FQDGYTFDPNDPETFTNSTSITIFDDLGNPTIATVYFIKTQAASADDPTNKYDTRLVIND 240 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 T T + + + + + + S + +Q Sbjct: 241 TVITPDLVSAVDDAGKQIFVDRFGQQTTTIPDDNYFIEGKGSPLYKLDDLQTLVPSQPAK 300 Query: 284 KPGDLVSYQINDDG 297 G+ S+ ++G Sbjct: 301 ISGEQTSFDFGEEG 314 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 3/177 (1%) Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKP 285 L F+ G LV + + S Q +++ Q+G+ Sbjct: 1213 GELTFDKTGKLVSPKNLVHYEKQEEGFSIALDVDFSTS---TQLAQPFSVLTVEQDGFTS 1269 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 G L +I+ GT+ NY+N Q LG+IV+ANF N GL G+ ++ T SG +G Sbjct: 1270 GRLDGIEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYTETAVSGTPQVG 1329 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 AG+ FG + +G+LE SNVD+++ELVN+I AQRN+Q++A+ I+T + T++N+R Sbjct: 1330 EAGSEGFGNILSGSLERSNVDITEELVNLITAQRNFQASAKAIETTTGLTQTIINIR 1386 >UniRef50_A7HN97 Putative uncharacterized protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN97_FERNB Length = 770 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 85/313 (27%), Positives = 127/313 (40%), Gaps = 31/313 (9%) Query: 121 ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK 180 G N I +K T FS + S Sbjct: 457 TNGANTIYDDNFISGNSYIDEIYQPSKVDMITIPGAGEPRFYEADNPTNFSVVSFKSPFY 516 Query: 181 KGSVTVFDSQGNAHDMSVYFVKTGD------NNW------------QVYTQDSSDPNSIA 222 S V+DS GN + + + FVK N W + + + Sbjct: 517 TTSTQVYDSLGNPYTLYIDFVKLASVYGNHENAWAFRIRSASGENIKYLSNYDTATEITG 576 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF-------------LNSMQQN 269 T L F+ G L+ + G + LNSM Q Sbjct: 577 GTCGVLRFDKTGRLLGVNSFDPSTGRISEGENVDAILFNAGENGDGIVKIKLDLNSMTQF 636 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 + Q+G G L S+ I+++G ++G+++N +LG++ LA F N GL G Sbjct: 637 AALADAFVKNQDGNAQGVLESFSISENGDIIGSFTNGLVDVLGKVALATFNNPAGLLELG 696 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 ++++ + +SG A +G G FG+L GALE SNVDLS+E +I+AQR +Q+NA+TI Sbjct: 697 NSLYGESANSGTARIGQPSKGGFGSLVAGALEMSNVDLSEEFTKLIIAQRGFQANARTIT 756 Query: 390 TQDQILNTLVNLR 402 T DQIL +VNLR Sbjct: 757 TADQILQEVVNLR 769 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 115/310 (37%), Gaps = 35/310 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + VSGL +DV+ NNI+N T GFK ++A F+ Sbjct: 4 SLYSGVSGLQGFQQEIDVVSNNISNVNTIGFKGARVTYATNFSQILDMSRRATDNTGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++G G++VA I + G+ NTG+ D+AI GFF L + F++R G F LD Sbjct: 64 PKQIGYGIRVASIDKIMNQGSFQNTGKKTDLAIQGEGFFILSNGQ-RQFFTRAGNFDLDL 122 Query: 105 NRNLVNM-QGLQLTGYPATGTPPT----IQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 N +V GL+L G+ A P + + +NI I + L A TT Sbjct: 123 NGTIVQPTTGLKLQGWVAEVDPMSGRRYVDTNKPISNIQISSGLSMAAKQTTRMTMAGNL 182 Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN 219 + P + + V+ G D T + + ++ + Sbjct: 183 DARVGPEKFVIAINGYGGRTINTKVSFERDFGALQD-------TFSDYQVYLGKIDANLD 235 Query: 220 SIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATT 279 ++F+ G +V+ +G +G L+ N +QQ G + Sbjct: 236 DKVDGKVYIKFDKFGNVVNAGAIKQKLSGTASGGA-----LTLTNPIQQQDGNYLFIIRD 290 Query: 280 QNGYKPGDLV 289 NG L Sbjct: 291 SNGKIVDTLS 300 >UniRef50_UPI0001C35D09 hypothetical protein ChatD1_21894 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35D09 Length = 664 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 85/403 (21%), Positives = 131/403 (32%), Gaps = 54/403 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + AVSG+ A T LDVIGNNIAN TYGFKS A F D+F Sbjct: 4 SLYSAVSGMKAHQTKLDVIGNNIANVNTYGFKSSRARFQDVFYQTLQSAAGGDNNKGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 S+VG G ++ GI D + +TGR LDVAI+ GFF+++D++G++FY+R G LD Sbjct: 64 ASQVGYGSQLGGIDLDMSRSALQSTGRPLDVAIAGEGFFQVMDADGNIFYTRAGNLMLDS 123 Query: 105 N-RNLVNMQGLQLTGYPATGTP---------------------PTIQQGANPTNISIPNT 142 N NLV+ G + G T+ I+ Sbjct: 124 NSGNLVDSNGYTVLGVSGDPLGKAPSSDKIHLNIPTKSSGLASKTLTINGTQFTITSEKA 183 Query: 143 LMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 A + T + NL S + ++ + + + M+ + Sbjct: 184 TTDANVSITFKAEDNLPSGSDIVVNPSDINDSSITVHVNKNAIFTSLSDFNSKMNSAITR 243 Query: 203 T------GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPA 256 N+ + + + T L + G A Sbjct: 244 GCGGKAHPGGNFTITATPAENVFQKPLTGAELLGDHFGINEGTFEFVTSTDAADGIFGGL 303 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVL 316 FS + G + + + G DG NE T G++ Sbjct: 304 KFSGMSTSPAFDAAGPVDFKSELRPGTGGKMAWVVTATVDGREFVGEINENTTTAGKM-- 361 Query: 317 ANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGA 359 L G + G + ++ G Sbjct: 362 -------WLKEAGTGQYIEMSHPGYTAITSSFNAGTGNTAQSF 397 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 7/195 (3%) Query: 215 SSDPNSIAKTATTLEFNANGT------LVDGAMANNIATGAINGAEPATFSL-SFLNSMQ 267 + D + TL + G ++ A+ + T + + N Sbjct: 469 AGDLVLTEEGGGTLTIDHKGYSDINTAFLNADEADKTYASFVPKDHAGTITAATQSNDAG 528 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 +G + T+ G S I +G + + ++ +G+I L F N GL Sbjct: 529 LGSGTFTLENGTEGGAISLSGASIAILGNGIIEATHPDKGKIQIGRIDLVTFENPYGLEE 588 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 G++ + AT +SG A AG G L +LE SNVD+S E +MIV QR +Q+N++ Sbjct: 589 SGNSYFRATSNSGEAKACQAGEDGTGALKTSSLEMSNVDISTEFSDMIVTQRGFQANSRI 648 Query: 388 IKTQDQILNTLVNLR 402 I D IL LVNL+ Sbjct: 649 ITVSDSILEELVNLK 663 >UniRef50_D1U366 Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U366_9DELT Length = 515 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 135/341 (39%), Gaps = 33/341 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL A + V+ NN+ANS T +KS + +F D+F + +VG GV Sbjct: 6 SMYTGISGLKAQSQATSVVSNNLANSTTTAYKSSSITFEDVFYSTVYAGGSVGQVGNGVT 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 VA + D++ G+ +T DVAI+ NGF+ ++D + G+ +Y+R G F + L + Sbjct: 66 VASVNTDYSQGSYESTNSATDVAINGNGFYVVIDPDTGNTYYTRAGNFTFNTEGYLEDAH 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSA 172 G ++ G+ T+I I + T+ +NL+S++ T + + Sbjct: 126 GNKVQGWAMNDGSIE----GTLTDIVIDQSQSPPNATSEVGFSLNLDSTETDHTTSATNP 181 Query: 173 SNA---------------DSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT----- 212 A +Y +++VFD G+AHD++VYF ++ + Sbjct: 182 YAALFEAYDGTADPALGDSAYAYSTTISVFDENGSAHDVTVYFDPVETDDGTIVWEYVVT 241 Query: 213 QDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 + S+ N + G L+ G + + + ++ + Sbjct: 242 CNGSEDNRDFNGTEMNATSGAGMLMTGTVTFSSSGDIVSMTAFTLSDTPTNLTDPLAAEN 301 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 + +G+ ++D + N T G Sbjct: 302 WVLADFDADGFPVFSANFTGADEDQPIALNLGMANTNTTGT 342 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 5/286 (1%) Query: 122 TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK 181 T + + N S N S L + + + S Sbjct: 229 TDDGTIVWEYVVTCNGSEDNRDFNGTEMNATSGAGMLMTGTVTFSSSGDIVSMTAFTLSD 288 Query: 182 GSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAM 241 + D + + F G + + + IA N GT D + Sbjct: 289 TPTNLTDPLAAENWVLADFDADGFPVFSANFTGADEDQPIALNLGMANTNTTGTGWDTSG 348 Query: 242 ANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA-----TTQNGYKPGDLVSYQINDD 296 + +Q T + ++ +Q+GY PG L++ I+++ Sbjct: 349 GISSLADFTPTTAVGDLPAFNNGVVQTTTTTSTSLSSATYSLSQDGYAPGVLINVAIDEN 408 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G + G Y+N QTQ L I LANF N +GL+S+G N++SAT SG A +GT G+ FGT+ Sbjct: 409 GVLSGEYTNGQTQELYTIALANFTNTQGLSSQGSNLYSATTESGQAFIGTPGSAGFGTIA 468 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +LE SNVD + EL +I+ Q YQ+NA+ I T D +L+ ++++ Sbjct: 469 SNSLEQSNVDTATELTKLIILQAAYQANAKVITTADTLLSAAISMK 514 >UniRef50_D2L1Z5 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1Z5_9DELT Length = 551 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 128/349 (36%), Gaps = 56/349 (16%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL A +T + IGNN+AN T GFK F D+ + ++G GV+ Sbjct: 8 SMWSGVSGLLANSTKMSTIGNNLANVNTVGFKGARTDFMDLMSANIGTAAGDKQIGRGVR 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-------------DSNGSVFYSRNGQF 100 V + D++ G T LD+AI+ NGFF + N + +YSR G F Sbjct: 68 VGTVVSDYSQGGLETTSNSLDMAINGNGFFMVKQKSQVGSNGKMLNTGNQTNYYSRAGNF 127 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPP-----------TIQQGANPTNISIPNTLMAAKTT 149 D + LV QGL + G+ +I + AK T Sbjct: 128 SFDSDGYLVTPQGLAVQGWKVDQERIDAANASGTVLSQTPVSGEIQDIRLSQFTSPAKAT 187 Query: 150 TTASMQINLNSSDPLPTVTPFSASN------------------ADSYNKKGSVTVFDSQG 191 ++ ++ NL+S + S +N + +Y+ + +V V+D G Sbjct: 188 SSVTLITNLDSDTKSASTRSASNANYYYAMTESWDGTQDPAMPSTAYSYQTTVKVYDENG 247 Query: 192 NAHDMSVYFVKTGDNNWQVYTQD-----SSDPNSIAKTATTLEFNANGTLVDGAMANNIA 246 + H ++ Y+ K D N + Y + ++ +A T L+ + Sbjct: 248 SPHTLTTYYDKVADVNGKEYWEYTVTCAPNEDGRVASNGTPFGGTEAAGLLMTGTMTFDS 307 Query: 247 TGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 +G++ T S A NGY +++ Sbjct: 308 SGSMENMSAYTMKASNAT-PGDFDATQWTAADVSNGYPVFTANFKSVSN 355 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 2/242 (0%) Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 + + T +++ T D + F + ++ T + + Sbjct: 311 MENMSAYTMKASNATPGDFDATQWTAADVSNGYPVFTANFKSVSNASFTNSTNNPLNIAL 370 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQ 280 + F+A G + P+T ++ N +++ V ++Q Sbjct: 371 NFGISNIAGFSA-GASGSSLATAGHDPANLVHFNPSTMKVN-SNVTTNYATSSSTVFSSQ 428 Query: 281 NGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSG 340 NGY G L + ++ DG + G++SN QTQ L + LANF N +GL+ EG N+++AT SG Sbjct: 429 NGYTSGLLNNVSVDADGILTGSFSNGQTQKLWALALANFTNLQGLSREGSNLYAATLESG 488 Query: 341 VALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 A TG+ G+++ LE+SNVD++ E+V+MI+ QR +++N++TI T D +L+ ++ Sbjct: 489 QGTTNRANTGSVGSISGNTLESSNVDMATEMVSMILTQRGFEANSKTITTVDSMLSEVIQ 548 Query: 401 LR 402 L+ Sbjct: 549 LK 550 >UniRef50_Q1N302 Flagellar hook protein FlgE n=3 Tax=Proteobacteria RepID=Q1N302_9GAMM Length = 1240 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 45/336 (13%) Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 G + G AT + G + T+ + + + F Sbjct: 905 NAGPVVLGGTATADTAAVVGGTIEFIFNEGYTISNPIPSVSGVFGALSEDEFEDYVLNVF 964 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG--------DNNWQVYTQDSSDPNSIA 222 A + D+YN S T++DS GN+H M+ YFV+ +N W +Y Q Sbjct: 965 DAQDQDTYNHATSTTIYDSLGNSHIMTQYFVREPLDPTRPNEENVWAMYVQIDGKDVGDP 1024 Query: 223 KTA-------------TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ-- 267 + L FN +GT + T E + + + + Sbjct: 1025 DSTLPFPDNLEPTQFRQELFFNPDGTFDQQSTGPIFVTNWDPVDEEGSPTGALKSQNVLE 1084 Query: 268 ----------------------QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSN 305 Q ++ +QNGY G L +I+ DG + ++N Sbjct: 1085 GGLPLNDPPTNSNFEILLEDSSQFGSPFSVSEVSQNGYTTGRLTGLEIDADGFIFARFTN 1144 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 Q ++LGQ+ LA+F N EGL GD W + SG +G+ TG FG L + ALE SNV Sbjct: 1145 GQAEVLGQVALASFKNPEGLIPLGDTAWGESFESGTPTVGSPRTGTFGNLRSSALEDSNV 1204 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 DLS+ELV +I+AQRN+Q++A+TI+T D + T++ L Sbjct: 1205 DLSEELVGLIIAQRNFQASAKTIETSDTVTQTIIQL 1240 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 17/303 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 MAF+ +SG+ AA+T+L+V GNN+AN++T GFK A FAD++ VG GV Sbjct: 1 MAFNIGLSGIRAASTDLEVTGNNVANASTVGFKESRAEFADVYTTTILGTGSKPVGSGVL 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F+ G + T LD+AI NGFF L D NG+ Y+R G F LD++ +V G Sbjct: 61 VDNVRQEFSQGNISGTENALDMAIDGNGFFILND-NGTESYTRAGIFGLDKDGFVVANSG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L GY A G ++ I T+ S IN+++S+ + + Sbjct: 120 ARLQGYEANGDGVV---NGVLGDVQIRIGNQPPSLTSRVSSIINVDASELVKQELGSRLT 176 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + + DS G+ + ++ A + Sbjct: 177 SDGLAVAAPDAGIADSTSTVLSTVAQPTTAGNRT---ALTFDNGGVDLSAQANVVAQTDP 233 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 G + + T ++ + N + A +++ Sbjct: 234 GAFGVTIDPFDGTGAQVINIPAGTVTI---GATPTQHLQNILNALQSEIDAVFGNNEFEV 290 Query: 294 NDD 296 + + Sbjct: 291 STN 293 >UniRef50_A7GVS8 Flagellar hook protein FlgE n=2 Tax=Campylobacter RepID=A7GVS8_CAMC5 Length = 819 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 21/321 (6%) Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD 162 D + VN G P+ G + A + ++++ Sbjct: 498 DGVKFTVNNAGQYQLENPSNGEFDKALYMTTTGLTTEATGSSNANAAVSENVRLTTIMKA 557 Query: 163 PLPTVTPFSASNAD----SYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN-----WQVYTQ 213 ++P A + + ++DS G+ H +S+ + KTG N W + Q Sbjct: 558 LDGALSPGQALRNSGKLMMSSHGSTAEIYDSLGSKHTVSIKWAKTGTTNDGGTEWSMIIQ 617 Query: 214 DS-------SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL--- 263 S +L FNANG+L A T SL+F Sbjct: 618 VPEPAKINYSGEGPDNVITGSLRFNANGSLASFHPATFTFTANNGSQAGQNVSLNFGLGT 677 Query: 264 --NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN 321 N + ++ + +Q+GY G L +I++ GT++G ++N ++ L Q+ LA F N Sbjct: 678 DFNGLTSFDKDSSTESISQDGYTGGTLRDIKIDETGTIIGAFTNGKSFGLAQVALATFTN 737 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 NEGL SEG NV+S T +SG A++G AGTG+ GT+ LEASNVDLS+ L ++IV QR + Sbjct: 738 NEGLQSEGGNVFSQTANSGEAVIGAAGTGDKGTVAASKLEASNVDLSRALTDLIVIQRGF 797 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 Q+N++TI T D++LNTL+ L+ Sbjct: 798 QANSKTITTSDEMLNTLLQLK 818 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 112/315 (35%), Gaps = 25/315 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNIAN TYG+K A+FAD+ + + Sbjct: 4 SLWSGVSGLQAHQIAMDVEGNNIANVNTYGYKYNRANFADILSQTPRVATAPQGELGGQN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLD 103 ++GLG + T+ F+ GT T+T + D+A+ NGFF + G+ +Y+RNG F D Sbjct: 64 PMQIGLGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFIVSPDGGTTRYYTRNGDFVRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSD 162 + N VN G + G+ TI NI A+ TT ++ NL+S + Sbjct: 124 KAGNFVNNSGHIVQGWTRDEETGTIDSTGPIKNIVIKEGLTTPARATTEVKIKGNLDSGN 183 Query: 163 PLPTVTPFSAS------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS 216 + + S D N D N + + ++ + + Sbjct: 184 TIGARSTPIYSLDSVAGGRDYNNNGIKDNGEDHLENDVNNNQFYTNSKNEQVLTERGVDL 243 Query: 217 DPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIV 276 N G V A A + + T + N Sbjct: 244 GVLYDELGNGLALRNNQGIWVSYANAKSTPFDIGDAPGGTTTGQINSPTGATLDIELNGT 303 Query: 277 ATTQNGYKPGDLVSY 291 T ++ Sbjct: 304 KITSAPNAMKNISDV 318 >UniRef50_B9K8L8 Flagellar basal-body rod protein FlgG n=106 Tax=Bacteria RepID=B9K8L8_THENN Length = 268 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 10/269 (3%) Query: 134 PTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNA 193 ++ T M+A+ ++ NL + D + Y + + + Sbjct: 9 MISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATST 68 Query: 194 HDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGA 253 +Y V G + A L +G + G I Sbjct: 69 LPTGLY-VGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQ-----LQDGRIAYT 122 Query: 254 EPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQ 313 +F + + + G + T P + VS ++ DG V + Q LG Sbjct: 123 RDGSFKVDSEGRIVTSNGLLLVPEIT----IPENAVSINVSPDGIVSAELQDGTIQQLGT 178 Query: 314 IVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVN 373 I L F N GL S GDN++ AT +SG + G G FG + G LE SNVD+ +E+V+ Sbjct: 179 ITLVRFVNPSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVD 238 Query: 374 MIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 MI AQR Y+ N++ I+T D++L T N++ Sbjct: 239 MITAQRAYEFNSRVIQTADEMLRTATNVK 267 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 24/177 (13%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------------- 46 ++ A +G++A LD I NN+AN T G+K A F D+ Sbjct: 10 ISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATSTL 69 Query: 47 ----KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL 102 VG GV+ A T+ FT G TG LD+AI+ +GFF++ +G + Y+R+G FK+ Sbjct: 70 PTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSFKV 129 Query: 103 DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 D +V GL L TI + A N+S + A T + Sbjct: 130 DSEGRIVTSNGLLLV------PEITIPENAVSINVSPDGIVSAELQDGTIQQLGTIT 180 >UniRef50_B9KEI8 Flagellar hook protein FlgE n=1 Tax=Campylobacter lari RM2100 RepID=B9KEI8_CAMLR Length = 814 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 121/305 (39%), Gaps = 24/305 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNIAN T+GFK A F+ + + + Sbjct: 4 SLWAGVSGLQAHQYAMDVEGNNIANVNTFGFKYSRADFSTLMSQTSKIATAPDGNLGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSV-FYSRNGQFKLD 103 +VGLG V T+ + G T + D+AI+ +GFF + + G+ F++R G FK D Sbjct: 64 PMQVGLGAGVNSTTRIHSQGNIQTTDKNTDMAINGDGFFIVSNDGGTTQFFTRAGDFKTD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ I + T+I P M A+ +++ S+ NL+S + Sbjct: 124 AVGNFVDNNGYTVQGWNYNQETGQIDSSKSVTDIVIPPGMSMPARPSSSVSLTANLDSGN 183 Query: 163 PLPTVT----PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDP 218 L T P A ++ +K + T D H K+G + Sbjct: 184 TLGTNASAKRPIYALDSLHGGRKDTGTTIDENDTGHTEFYTTSKSGAQVTEKGVDMGVVF 243 Query: 219 NSIAKTATTLEFNAN-GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 N+ + + + D +N +PA ++ G + ++ Sbjct: 244 NAQGEGLNLRDGQGIWVSYADAKHTSNATMATDLPTDPAQWTNGNHTFWGYKDGGDAVLD 303 Query: 278 TTQNG 282 T NG Sbjct: 304 ITING 308 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 88/346 (25%), Positives = 138/346 (39%), Gaps = 39/346 (11%) Query: 96 RNGQFKLDENR-----NLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTT 150 R+ ++ +D + N+ N G G A + + I+ P Sbjct: 468 RDARWGVDYDGDGSLENVNNPAGGNNIGEDANPLVEVVVESDGRFKITNPTGGKDMTFKV 527 Query: 151 TASMQINLNSSDPLPTVTPFSASNAD--------------SYNKKGSVTVFDSQGNAHDM 196 T + FSA + + S+ +FDS G H++ Sbjct: 528 TGFSDEVNKIATNDKFTAMFSALDGNFNAGNNEKYSQDMYLSAHTASIEIFDSLGTRHEL 587 Query: 197 SVYFVKT-----GDNNWQVYTQDS--------SDPNSIAKTATTLEFNANGTLVDGAMAN 243 +V F K G W + D L F +G+L Sbjct: 588 TVQFTKQSKTADGGAEWSIIISVPEPAEINFSGDGAPGNIVVGNLRFGNDGSLQSYTPNV 647 Query: 244 NIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGYKPGDL--VSYQINDD 296 TG L F + + + +GY G+L + + +++ Sbjct: 648 LNFTGNNGSKPDQVIKLDFGTTGGFDGLTSYDKDSATTKQETDGYTGGNLKPDALRTDEN 707 Query: 297 GTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLT 356 G + G ++N +T L ++ LA F NN GL G+N++ AT +SG A +G AG G G L Sbjct: 708 GYIYGEFTNGKTLALAKVALATFPNNMGLEEMGNNLYKATANSGTATIGHAGEGGRGGLK 767 Query: 357 NGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 A+E SNVDLS+ L +IV QR YQ+N++TI T DQ+LNTL+ L+ Sbjct: 768 GSAIEMSNVDLSRALTELIVIQRGYQANSKTITTSDQLLNTLLQLK 813 >UniRef50_A4J757 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J757_DESRM Length = 856 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 107/307 (34%), Gaps = 17/307 (5%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-----------KVGL 50 + +SG+ T +DV GNNIAN T G+KS +F D + + +VG Sbjct: 4 SLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQVGS 63 Query: 51 GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 G+ V ++ +FT G +TGR LD+ I NGFF + D FY+R G F +D+ LVN Sbjct: 64 GMSVGSVSNNFTQGPMQSTGRTLDLGIQGNGFFVVSDGTNE-FYTREGIFFVDKQGFLVN 122 Query: 111 MQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPF 170 +GL++ A + + NI + T N +S + Sbjct: 123 GEGLRVQSL-AGQDIRVLNGPVSTINIGPDGAIAGTNTAGQPLKFSNNDSQAIITPAQQS 181 Query: 171 SASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 S A Y ++ + + + + T + Sbjct: 182 SIKGAPKYTTPKVEEATIKGIAMSPVTQPLEEAMVRGDSNSPDVAPLGITDSVTPIDMST 241 Query: 231 NANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 + AT + ++ + + Q N +G P Sbjct: 242 DQLTLKYSDGTNTYTATLNTGLTQVKSW---YDLASQLQNAINTYENPPGSGTFPLK-DK 297 Query: 291 YQINDDG 297 ++ DG Sbjct: 298 VIVSYDG 304 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 54/95 (56%) Query: 308 TQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDL 367 +G I L F N EGL G N++ + SSG G A FGT+ +G LE SNVDL Sbjct: 761 QDTMGVIKLVTFQNPEGLEKAGRNLFGTSVSSGEPKQGQANQSGFGTINSGYLEMSNVDL 820 Query: 368 SKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++E NMI QR YQ+NA+ I D +L L+ L+ Sbjct: 821 TEEFTNMITTQRGYQANARVITVSDSLLEELIQLK 855 >UniRef50_Q3ADD6 Flagellar basal-body rod protein FlgG n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD6_CARHZ Length = 261 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 74/153 (48%), Gaps = 12/153 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------SKVGLGV 52 + +SGL + +DV+ NNI+N T G+KS +F D+ S VGLGV Sbjct: 4 SLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVGLGV 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS-NGSVFYSRNGQFKLDENRNLVNM 111 V+G+ FT G +TGR LDVAI NGFF L D +YSR G F LD++ L+N Sbjct: 64 NVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYLING 123 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLM 144 G ++ G I ++I N Sbjct: 124 HGYRVQ--DVNGADIQINNPEAVVTLTIQNDGQ 154 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 99/253 (39%), Gaps = 12/253 (4%) Query: 158 LNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHD----MSVYFVKTGDNNWQVYTQ 213 L S V + SN ++ K S F+ + +V G N V T Sbjct: 12 LKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVGLGVNVSGVDTI 71 Query: 214 DSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA- 272 + + NG V T + F L + G Sbjct: 72 FTQGGLKSTGRPLDVAIQGNGFFVLKDP----VTTRTYYSREGVFYLDKDGYLINGHGYR 127 Query: 273 -NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 ++ P +V+ I +DG + S+ T+ G I L +F N E L G N Sbjct: 128 VQDVNGADIQINNPEAVVTLTIQNDGQIKLVRSDGTTEFAGPIGLMSFKNPETLERIGQN 187 Query: 332 VWSATQSSGVA--LLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 V+SAT + + T G G L +G LE SNVDL+ E MIV QR YQ+NA+ I Sbjct: 188 VYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQANARVIT 247 Query: 390 TQDQILNTLVNLR 402 T DQ+L L+N++ Sbjct: 248 TSDQMLEELLNIK 260 >UniRef50_C9R9Y6 Fagellar hook-basal body protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9Y6_AMMDK Length = 266 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 15/218 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------SKVGLGV 52 + VSGL +DVI NNIAN T GFK+ A+F D+ + ++VGLGV Sbjct: 4 SLFSGVSGLRVHQIRMDVIANNIANINTTGFKAARANFQDILSQTLGRSAVNTTQVGLGV 63 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV--DSNGS----VFYSRNGQFKLDENR 106 +A I T G TGR LD+AI NGFF + DS+G+ Y+R+G F +D++ Sbjct: 64 SLAAIDNIMTQGALQTTGRALDLAIEGNGFFVVKPVDSSGNSVNHPLYTRDGTFYIDKSG 123 Query: 107 NLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT 166 +VN QG +L +I + K+ T + P Sbjct: 124 YIVNAQGYRLQSTSNDNIQIADPDKIVSISIGSDGVISVVKSDGTKITYNIGLVTFKNPE 183 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG 204 +N + + G ++++G Sbjct: 184 SLQRVGANLWDVTPNVTDPATPTPGAPGTDGRGYIRSG 221 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 92/249 (36%), Gaps = 7/249 (2%) Query: 160 SSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPN 219 D + + + + ++ V G + + + Sbjct: 18 RMDVIANNIANINTTGFKAARANFQDILSQTLGRSAVNTTQVGLGVSLAAIDNIMTQGAL 77 Query: 220 SIAKTATTLEFNANGTLVD-GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 A L NG V ++ + TF + + G + Sbjct: 78 QTTGRALDLAIEGNGFFVVKPVDSSGNSVNHPLYTRDGTFYIDKSGYIVNAQGYRLQSTS 137 Query: 279 TQNGYK--PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSAT 336 N P +VS I DG + S+ T++ I L F N E L G N+W T Sbjct: 138 NDNIQIADPDKIVSISIGSDGVISVVKSDG-TKITYNIGLVTFKNPESLQRVGANLWDVT 196 Query: 337 QS---SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 + G GT G + +G LE SNVDL++E NMI+ QR YQ+NA+ I T D+ Sbjct: 197 PNVTDPATPTPGAPGTDGRGYIRSGFLEMSNVDLAQEFTNMIITQRGYQANARVITTSDE 256 Query: 394 ILNTLVNLR 402 +L LV+L+ Sbjct: 257 LLRELVDLK 265 >UniRef50_C6RJ18 Flagellar hook protein FlgE n=1 Tax=Campylobacter showae RM3277 RepID=C6RJ18_9PROT Length = 756 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 81/310 (26%), Positives = 138/310 (44%), Gaps = 19/310 (6%) Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 +VN G Y + N + N + + S Sbjct: 451 IVNEHGQ----YQFKNPSAAGAKDMNIAVTGLTNATKNVTENVKFTASMAPISGSLSAGG 506 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSSDPNSIA 222 + + S ++DS G H++ + F+K G W + Q + + Sbjct: 507 ATRVTDSLNMAAHSSSTDLYDSLGTKHNVKMDFIKRGYTENGGTEWTMVIQVAEPNSINT 566 Query: 223 KTA-----TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF-----LNSMQQNTGA 272 + FN +G+L + A+ A L F + + Sbjct: 567 VEPRNVVTGYVRFNPDGSLATYSPASITFGAQNGSAIGQNIELKFGTTQTTDGLTSTDNN 626 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNV 332 ++ +Q+GY G+L +I+ GT+VG+++N ++ L Q+ +A FANN+GLA EG N+ Sbjct: 627 SSTADISQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFANNQGLAGEGGNL 686 Query: 333 WSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQD 392 +S T +SG ++G A T G ++ +LE SNVDLS+ L +IV QR +Q+N++TI T D Sbjct: 687 FSRTANSGDPIIGAAQTAGRGKISASSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTSD 746 Query: 393 QILNTLVNLR 402 ++LNTL+ L+ Sbjct: 747 EMLNTLLQLK 756 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 117/327 (35%), Gaps = 28/327 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+GL A +DV GNNIAN T G+K A+F D+ + Sbjct: 4 SLWSGVTGLQAHQIAMDVEGNNIANVNTVGYKYNRANFDDLIYQTSRIATAPQNQHGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 +VGLG ++ T+ F G+ T + D+A+ +GFF + G + +Y+RNG F D Sbjct: 64 NMEVGLGTQINSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSSDGGKTTYYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ I +I IP + A+ TT +++ NL+S + Sbjct: 124 SEGNFVDNGGNIVQGWMRDEETGEIDPTRPIGDIKIPVGLTVPARATTNIALKGNLDSGN 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + +N G+ G N + V Sbjct: 184 DVGNKKIPIYKLDQHHNGVDLDNDGTIAGSEVHDENN---VGANRFYVNKNGEQRMTERG 240 Query: 223 KTATTLEFNANGTLVD----GAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVAT 278 L FN+NG + + A+ +++ + + + Sbjct: 241 ADLGVL-FNSNGDAYNLRDAQGTGGQGIWASYADAKTDGLTVAGVGADGSFAAPGKKLNI 299 Query: 279 TQNGYKPGDLVSYQIND-DGTVVGNYS 304 T NG I G + G YS Sbjct: 300 TLNGKNITGENILTIGQLAGIINGKYS 326 >UniRef50_Q30UL8 Flagellar hook FlgE n=2 Tax=Campylobacterales RepID=Q30UL8_SULDN Length = 718 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 17/311 (5%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQIN--LNSSDPLPT 166 +N QG P + T ++ + T T + LN++ P + Sbjct: 407 INAQGKFELSNPGGSQDGDYDINLSITGMNANSITGGGITENTKFTRNMEALNATLPAGS 466 Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDPNSI 221 + + ++ S+ +FDS G+ H + F K ++W + Sbjct: 467 TGKAFSQSFNAATHSASIDIFDSLGSKHTLRTEFRKVAVDASTGSSWNMKISVPEPATID 526 Query: 222 AKTA-----TTLEFNANGTLVDGAMANNIATGAINGAEPATFSL-----SFLNSMQQNTG 271 + + FN++G+L N T A ++ + + M Sbjct: 527 SVAPYNEKTGFVRFNSDGSLATFNPPNVSFTANNGSAANQQVAIKLGTSNSFDGMTSFDS 586 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 + +Q+G+ GDLV +I+ GT++G++SN ++ L QI +A F NNEGL++EG N Sbjct: 587 KSATSGISQDGFTGGDLVGIRIDQSGTLIGSFSNGRSFGLAQIGMAKFTNNEGLSTEGGN 646 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 V+ T +SG ++GTA T G + ALEASNVDLS L +I+ QR YQ+N +TI T Sbjct: 647 VYVQTANSGDPIIGTAATAGRGFMQAAALEASNVDLSLALTQLIIIQRGYQANGKTITTS 706 Query: 392 DQILNTLVNLR 402 DQ+L TL+ L+ Sbjct: 707 DQLLQTLIGLK 717 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 78/331 (23%), Positives = 129/331 (38%), Gaps = 30/331 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL + +DV NNIAN T G+K A+F+D+ A + Sbjct: 4 SLFAGVSGLQSHQVAMDVESNNIANVNTVGYKYSRANFSDLLAQTRAIATAPQGELGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 +VGLG V+ +T+ F+ G+ N+ + DVAI +GFF + G+ + Y+R G FK D Sbjct: 64 PVQVGLGATVSSMTRIFSQGSVQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDFKFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNIS-IPNTLMAAKTTTTASMQINLNS-- 160 N V+ G + G+ + A TNI+ P A T ++ NLNS Sbjct: 124 AGGNFVDNNGFIVQGWLRDRATGFVDATAPITNINIPPGLTTPASPTQHVVIKANLNSGP 183 Query: 161 --SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-------DNNWQVY 211 P S ++ + ++ +M V F +G Sbjct: 184 LVKTYSPAYEVKSYPTGTPLPNPEAIDENGNPIDSGNMGVLFNDSGEAFNLQTGQGIWAS 243 Query: 212 TQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTG 271 + + A +E + L DG + G + G A + +++++ T Sbjct: 244 FTPTKTAATAGVAAGAVELDITLELDDGTLKQITTNGGLAGNTAADNAARYVSAINAQTS 303 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 I+AT G+ + IN + N Sbjct: 304 VTGIIATYSGGFINLANSNSDINASHNIRIN 334 >UniRef50_B9CY95 Flagellar hook protein FlgE n=1 Tax=Campylobacter rectus RM3267 RepID=B9CY95_WOLRE Length = 784 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 16/299 (5%) Query: 120 PATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYN 179 A N T + N + + S + + Sbjct: 486 TANTNADANDHNMNLTVTGLSNAANNVTENVKFTASMAPLSGSLSSGNATRVTDSLNMAA 545 Query: 180 KKGSVTVFDSQGNAHDMSVYFVK-----TGDNNWQVYTQDSS------DPNSIAKTATTL 228 S +FDS G H++ + FVK G W + Q + D + Sbjct: 546 HSSSTDLFDSLGTKHNIKIDFVKRGYTPNGGTEWTMVIQVAEPNRINPDGEPANVITGYV 605 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQNGY 283 FN +G+L + A+ A L + + ++ +Q+GY Sbjct: 606 RFNPDGSLATYSPASITFGAQNGSAGGQHIELKLGTTAQMDGLASTDNDSSTADISQDGY 665 Query: 284 KPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVAL 343 G+L +I+ GT+VG+++N ++ L Q+ +A F+NNEGL+SEG N++S T +SG + Sbjct: 666 ASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFSNNEGLSSEGGNLFSRTANSGDPV 725 Query: 344 LGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +G A T G +++ +LE SNVDLS+ L +IV QR +Q+N++TI T D++LNTL+ L+ Sbjct: 726 IGAAQTAGRGKISSSSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQLK 784 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 23/252 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + V+GL A +DV GNNIAN T GFK A+F D+ + Sbjct: 4 SLWAGVTGLQAHQIAMDVEGNNIANVNTVGFKYSRANFDDLIYQTSRIATGPQNRHGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 +VGLGV+ T+ F G+ T + D+A+ +GFF + G + +Y+RNG F D Sbjct: 64 SMQVGLGVQTNSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSPDGGKTTYYTRNGDFSRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP-NTLMAAKTTTTASMQINLNSSD 162 N V+ G + G+ I +I IP + A+ TT +++ NL+S + Sbjct: 124 SVGNFVDNGGNIVQGWMRDEVTGEIDPTRPIGDIKIPSGLTVPARATTNIALKGNLDSGN 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + +N T + G D + N ++ + Sbjct: 184 DVGNKKIPIYQLDQHHNW----TDTNKDGIKVDAEKHEENNVGENRFYVNKNGEQKMTER 239 Query: 223 KTATTLEFNANG 234 + FN NG Sbjct: 240 GADLGVLFNKNG 251 >UniRef50_Q1YV97 Flagellar hook protein FlgE n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV97_9GAMM Length = 944 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 92/325 (28%), Positives = 140/325 (43%), Gaps = 28/325 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------VGLGVK 53 M+F +++GLNAA T L V NNIANS T GFK F D+FA S VG GV Sbjct: 1 MSFYTSLTGLNAATTQLAVTSNNIANSGTGGFKRSDTDFGDIFATSPLEKASSVVGRGVS 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + ++Q+F+ G + LD+AI+ +GFF L S+G+ Y+RNG F L+E +VN G Sbjct: 61 LKEVSQEFSQGNIEFSANSLDLAITGDGFFPLESSDGTKIYTRNGAFMLNEQNQMVNSAG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L P T G +P+ ++IP ++ TT S+ P F+ Sbjct: 121 QALQSLPVDST-NKADFGVDPSALTIPRATVSEFLPTTEVELGLNLPSEVTPITATFNPD 179 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD-------NNWQVYTQDSSDPNSIA---- 222 D+Y+K S+TV+ + G+A+ ++Y+VKT + N WQ Y A Sbjct: 180 KPDTYHKTTSLTVYGTSGSANLATIYYVKTANATAETPFNKWQTYVYVDDQEVDTALIQS 239 Query: 223 --KTATTLEFNANGTLVDGAMANNIATGAING----AEPATFSLSFLNSMQQNTGAN--- 273 T N G L + + + + + T + + + Sbjct: 240 SDTTGDQYFINKYGELKTRSELLELQSTSADSEKYLITQGTLYKKYSYDVLSEPTKSIPA 299 Query: 274 NIVATTQNGYKPGDLVSYQINDDGT 298 T G D ++ N DG Sbjct: 300 TASLTIAEGSTYSDALNLTNNSDGV 324 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 127/295 (43%), Gaps = 16/295 (5%) Query: 108 LVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 + + G ++G T + + + + A N++ + Sbjct: 665 MADSLGRTVSGITVDYQDATETLRITGSTTTDNSFIQVAGHADWGLE--NIDPGFGEAST 722 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 + + D F W D + Sbjct: 723 FIELFPDTSGTSTVYVTQTKDGDWTETTDGGEFDSNDVPYWTPIFLDKGE---------- 772 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 L F+ +G+LV + + I G +L++ NS Q ++++ +QNG GD Sbjct: 773 LTFDTSGSLVSPVAGVKLESAGITG---GDITLNYDNS-TQFNSPFSVLSQSQNGAPEGD 828 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 LV I DDG VV +YSN + LG+I+LANFA +GL GD + AT SG A LG Sbjct: 829 LVGVNIGDDGLVVASYSNGSQKSLGKIILANFATPKGLRQVGDTSYYATSVSGDANLGEP 888 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G FGT+ GA E SNVDL+ ELV++I AQRN+Q+NA+ I+T + T++ +R Sbjct: 889 GAAGFGTIRAGARERSNVDLTAELVDLITAQRNFQANAKAIETSSSLTQTIIQIR 943 >UniRef50_C5V017 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V017_9PROT Length = 498 Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 99/282 (35%), Positives = 141/282 (50%), Gaps = 10/282 (3%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M+F Q +SGLN A+ +LD IGNN+AN++T GFK A FADMFA S +G G K Sbjct: 1 MSFQQGLSGLNGASRHLDTIGNNVANASTVGFKQSQAQFADMFAASLSGSGAMPIGTGTK 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 + + Q FT G TNT LD AIS GFFRL D+ G+V YSRNGQF++D+ N+VN QG Sbjct: 61 LVAVAQQFTQGNITNTNNPLDTAISGQGFFRLTDAAGAVLYSRNGQFQVDKTGNVVNNQG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 ++GY A ++Q + I +T +A TTT ++ NL+S +P FS Sbjct: 121 HIVSGYLADAAGTIVKQT---VPLKITSTNLAPVMTTTTTVGANLDSRAAVPATAAFSTI 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + SY S++VFDS G +H ++YF + + ++D + L Sbjct: 178 DPTSYTSSTSLSVFDSLGASHVGTMYFARQPIATVGNGSFAAADTVMTVGSTVGLAVGNT 237 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNI 275 TL T A A + + +N+ Sbjct: 238 VTLAGTTYTITGVTNATTLAVTPAAAGVVAAAAATTNAPSNL 279 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 99/202 (49%), Gaps = 3/202 (1%) Query: 204 GDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL 263 + P T T + G + + + P T + F Sbjct: 297 PATTATPFATLGFSPTGTLSTLTAGAGSTAGATLGKVTTPSFNPVSTITTSPQTITFDFN 356 Query: 264 N---SMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFA 320 + Q G + TQNGY G L S DGT++G YSN Q++ LGQI L NF Sbjct: 357 SLAAGTTQFGGNFGVNTLTQNGYTSGQLNSTSTGTDGTILGRYSNGQSRALGQITLTNFI 416 Query: 321 NNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRN 380 N +GL G+N W T +SG GT G+ + G L A E SNVDL+ ELVNMI AQR Sbjct: 417 NPQGLQPVGNNEWVETSASGSPTTGTPGSSSLGMLQASATEDSNVDLTAELVNMITAQRV 476 Query: 381 YQSNAQTIKTQDQILNTLVNLR 402 YQ+NAQTIKTQD +L T+ +LR Sbjct: 477 YQANAQTIKTQDSLLQTITSLR 498 >UniRef50_C6BZU9 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZU9_DESAD Length = 513 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 135/326 (41%), Gaps = 34/326 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL + V+ NN+ANS+T GFKS A F D+F + +VG G Sbjct: 6 SLYTGISGLYVNSFATSVVSNNLANSSTVGFKSSDAIFEDVFYSTLTTGGGLAQVGNGAG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 V+ I D++ GT N+ +VAI+ +G++ +VD + + +Y+R G F D++ LV+ Sbjct: 66 VSTINTDYSQGTYQNSSISTNVAINGDGYYMVVDPDTSTTYYTRAGNFDFDKDGFLVDAY 125 Query: 113 GLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD---------- 162 G Q+ G+ + T I + + K T+ ++ +NL+S Sbjct: 126 GNQVQGWEMENG----SASGSLTTIQLDQSQSPPKATSEIALTMNLDSQSVDEAITANPY 181 Query: 163 ----PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN------WQVYT 212 L T + Y+ ++TV+D G+AHDM+ Y + V Sbjct: 182 TSLFELYDGTQNPPLDDSQYSYSTTMTVYDENGSAHDMTYYMDPVDVDADGNIVWEYVAA 241 Query: 213 QDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGA 272 ++ D L + L + G + T + S ++ ++ Sbjct: 242 YEAEDDMRSGSDGLDLNTTSGAGLAMTGTLTFNSEGQMTSMTAFTLNDSAASTATKDPAN 301 Query: 273 NNIVATTQNGYKPGDLVSYQINDDGT 298 + + + GY +L ++ + +G Sbjct: 302 WELASLSPAGYPEANL-NFTGSAEGQ 326 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 11/295 (3%) Query: 109 VNMQGLQLTGYPAT-GTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTV 167 V+ G + Y A ++ G++ +++ + A T T +S T+ Sbjct: 228 VDADGNIVWEYVAAYEAEDDMRSGSDGLDLNTTSGAGLAMTGTLTFNSEGQMTSMTAFTL 287 Query: 168 TPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATT 227 +AS A + G + ++ F + + + S N+ T+ Sbjct: 288 NDSAASTATKDPANWELASLSPAGYP-EANLNFTGSAEGQNVSFNFGMSSDNATWDTSGG 346 Query: 228 LEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 + AT + + ++L + + ++ Q+GY G Sbjct: 347 IT---------SLADITAATDYSDLPSFSDYTLETGATTSYSDSSSATYDIAQDGYPTGS 397 Query: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 LVS +++++G ++GNY+N Q+ L Q+ LA+F N GL +EG ++ AT SG A++GTA Sbjct: 398 LVSVEVDENGILIGNYTNSQSIELFQLGLASFTNESGLKAEGGTLFRATTDSGEAIIGTA 457 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G+ FG++ + ALE SNVDL+ ++ +I+ Q +YQ+N++ + T D +L T ++L+ Sbjct: 458 GSSGFGSVVSNALEGSNVDLASQMTELIIIQSSYQANSKVVTTADTLLQTAISLK 512 >UniRef50_Q1NLV6 Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NLV6_9DELT Length = 1069 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 1/193 (0%) Query: 210 VYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQN 269 D S+P + A + + F + + Q Sbjct: 877 FQISDYSNPAVPPDPSYEFFGPVETNYHAIAGSAEEDGSRLGMTASRRFEAEAM-ATTQY 935 Query: 270 TGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEG 329 ++ + Q+G+ G L S ++ G + GNYSN Q + Q+ LA+FAN +GL G Sbjct: 936 ANSSTTIFQDQDGFAAGFLQSVSVDTAGIITGNYSNGQVLMRAQVALADFANLQGLHKVG 995 Query: 330 DNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIK 389 N++ AT SG + G GT G + +LE SNVDL E V MI QR +Q+N++ I Sbjct: 996 GNIFRATTQSGAPVTGQPGTNGLGEIAPNSLEQSNVDLGTEFVKMITTQRGFQANSKMIT 1055 Query: 390 TQDQILNTLVNLR 402 T D++LN L+N++ Sbjct: 1056 TTDEMLNELINIK 1068 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 29/234 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SGL+ +++V+G+NIAN T + + A+F D+ + S +VG GV Sbjct: 6 SLYAGISGLSTMGNSMNVLGDNIANVNTTAYNASRATFQDVLSQSVATSAGSAQVGRGVT 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF--YSRNGQFKLDENRNLVNM 111 + + F G+ +T D+AI GFF + S + ++R G+F+ D NL+N Sbjct: 66 LTTVDGLFAQGSFESTSTATDMAIGGEGFFMMRGSGSAEADMFTRAGEFRFDTQGNLINP 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS---------- 161 G + G+ I+ NI T M +NL+S Sbjct: 126 AGHFIQGWQVDKDSGQIEGTIGDINI---GRATPPVPTDRIDMIVNLDSRIPRETTEQRL 182 Query: 162 ------DPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQ 209 + V P +A+++ +V V+DS+G AHD+++YF +T N Sbjct: 183 YEAWNGTNMTGVNPSPPIDANNFEYTTAVKVYDSKGAAHDVTIYFDRTTQENQW 236 >UniRef50_B8FK43 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK43_DESAA Length = 693 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 133/352 (37%), Gaps = 26/352 (7%) Query: 71 RGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENR--NLVNMQGLQLTGYPATGTPPTI 128 +V + NG D +G+V G D ++ G+ + T TPP Sbjct: 347 NSFEVDLDGNG---TTDISGTVA---GGGMTADATGSFDIYPPNGMLAQTWDGTATPPLG 400 Query: 129 QQGANPTNI--SIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTV 186 I + T N + + TV P + Sbjct: 401 DGAYEYQAILKVYDSLGNTHDLTVYYDKGDNEGEYEFIVTVAPDEDERGGGTTGLPDIDT 460 Query: 187 FDSQGNAHDMSVYFVKTGDNN------------WQVYTQDSSDPNSIAKTATTLEFNANG 234 G T D ++ D++D + + +++G Sbjct: 461 TIDNGAGLLARGVLTFTSDGEVSNVEMWEFNSDGTDWSIDNADNWTALNPDNSSHISSDG 520 Query: 235 TLVDGAMANNIATGAI----NGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVS 290 T + A T + S Q A N GY GDL Sbjct: 521 YFYINPSFAEDLTSPMELNLGMAYDGTAWVQESLSTTQYASAGNTTYQATTGYGVGDLDG 580 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 ++ DG + G+YSN Q + L +I LA F N +GL G N+++AT++SG A+ GT Sbjct: 581 ISVSSDGVITGSYSNGQIKPLFRIALAKFNNVQGLQKMGQNMFAATRNSGDAITNKPGTN 640 Query: 351 NFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GT+T+ +LE SNVDL+ E V MI QR YQ+N++ I DQ+L ++NL+ Sbjct: 641 GLGTITSNSLEQSNVDLANEFVKMITTQRGYQANSKVITVTDQLLQEVINLK 692 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 76/368 (20%), Positives = 134/368 (36%), Gaps = 17/368 (4%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 A +SG+N ++ VIG+NIAN +T GFKS +F D+ A + ++G G Sbjct: 6 ALFSGISGMNTLGNSMTVIGDNIANVSTVGFKSSRVTFQDVLAQTVSTQSGTGQLGRGAA 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNM 111 + IT F+ G+ +T D+AI GFF + D +++R G+F+ DE+ N VN Sbjct: 66 MGDITGIFSQGSLESTDSATDLAIGGEGFFVVRDPENVNLEYFTRAGEFRFDEDGNFVNP 125 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G + G+ + + +I + + + T ++ NL+S ++ Sbjct: 126 SGYLVRGWTLDQKG---NEEGSIGDIILNSFTSPPEATDKVTLITNLDSDGEDNSLDA-D 181 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 A S + + V T + + V + SI AT Sbjct: 182 VKTASLGTVSLSGDAVNHPIYLTLNNQTAVNTDVSQFAVAWNSGAGAWSITHGATEYPAA 241 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQN-TGANNIVATTQNGYKPGDLVS 290 G + G + SL+ + + + TQ G + + Sbjct: 242 VISGDAAGFTIDLDNDGTADITGRTGGSLTADGAGSFDIEAPGALGVVTQGGDAVNNNIM 301 Query: 291 YQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTG 350 ++D ++ S + + N GLA+ S +S L GT Sbjct: 302 VTVSDSEAILAMASGFEVSWTNATATWSITN--GLANYPSASVSGNANSFEVDLDGNGTT 359 Query: 351 NFGTLTNG 358 + G Sbjct: 360 DISGTVAG 367 >UniRef50_C5ZVV6 Flagellar hook protein n=2 Tax=Helicobacter RepID=C5ZVV6_9HELI Length = 751 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 23/319 (7%) Query: 97 NGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI 156 NGQF+++ + VN+ Q G + + + K T + Sbjct: 442 NGQFEINNRDDGVNVANNQ-QGAAYDNLNIFVSAYNDTLTTTNVLFKNQMKAMNTGVL-- 498 Query: 157 NLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSS 216 + S + ++ ++DS GN HD ++ F K N W Sbjct: 499 -------VEGGNITSTAGLRMATYSQTLDIYDSLGNKHDFTIQFTKVAGNQWNWRIIVPE 551 Query: 217 DPNSIAKT--------ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL----- 263 I T ++ F G ++ + A P + L F Sbjct: 552 PAELIGGTAQRPNILEGGSVTFGEQGEILGFNPSTIQFKPNNGAAFPQSIDLDFGTSGGY 611 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 + + + +GY G L + + GT++G + N QT L Q+ +A+FAN E Sbjct: 612 DGLTSTAAESQANNIDGDGYTAGMLQDFYFDATGTMIGKFDNGQTLALAQVAVASFANYE 671 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 GL G N+++ + +SG +GTAG+G ++ LE SN DLS+ L +IV QR +Q+ Sbjct: 672 GLQESGSNLFAESPNSGGPTIGTAGSGGRASIQASKLEMSNSDLSRGLTQLIVVQRGFQA 731 Query: 384 NAQTIKTQDQILNTLVNLR 402 ++++I T DQILNTL+ L+ Sbjct: 732 SSKSITTSDQILNTLLGLK 750 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 82/344 (23%), Positives = 128/344 (37%), Gaps = 39/344 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + VSG+ A LDV NNIAN T GFK A F+ M + +K Sbjct: 4 SLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRAATIPYAGYGGVN 63 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 VGLG + T+ F+ G+ NT R D+A+ NG F + ++ G + Y+R+G F D Sbjct: 64 DYSVGLGTGIETTTKIFSQGSLQNTDRKADLALEGNGMFVVSNNGGFTNMYTRDGAFSFD 123 Query: 104 ENRNLVNMQGLQLTGYPAT----------GTPPTIQQGANPTNISIPNT-LMAAKTTTTA 152 NLV G + G+ G + NI+I + AK T T Sbjct: 124 AVGNLVTTSGYIVQGWVRDLSKLNCDCGSGNINRVDSTGPIGNITIDPRLTIPAKATETV 183 Query: 153 SMQINLNSSDPLPTVT---PFSASNADSYNKKGSVTVFDSQGNAHDMSVYF-VKTGDNNW 208 + INL S T P +++A++Y G ++D+ +++ V D Sbjct: 184 TGNINLTSGTKTENTTCPSPLDSTSANNYIAGGLDRLYDTADRQLEVAQDMGVMFNDAGE 243 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDG---AMANNIATGAINGAEPATFSLSFLNS 265 + Q+ +TATT + N V + T + + +L Sbjct: 244 AMQLQEGQGIWVSYQTATTTPLHINAAAVGASSITINGVTITWNNDPTATGSSNLLAAQV 303 Query: 266 MQQNTGANNIVATTQNGYKPGDLVSYQINDDG---TVVGNYSNE 306 N V G + Q++ DG + N Sbjct: 304 AINNLKDTTGVEALTRGDTLILQNTNQLDGDGSNKNIRVTAMNG 347 >UniRef50_C8W1G5 Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G5_DESAS Length = 263 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 6/188 (3%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF----AGSKVGLGVKVAGI 57 + VSG+ T +DVIGNNIAN T G+KS F D+ AG +V GV +AGI Sbjct: 4 SLYSGVSGMKNHQTRMDVIGNNIANVNTTGYKSSRVQFKDVLGQTIAGGQVASGVTIAGI 63 Query: 58 TQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGS--VFYSRNGQFKLDENRNLVNMQGLQ 115 +DFT G+ T T D+ I NGFF + D ++Y+R+G F +D+ LVN G + Sbjct: 64 NKDFTQGSQTATENSTDLYIHGNGFFIVQDPGDPSILYYTRDGSFHVDDTGQLVNSLGYK 123 Query: 116 LTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNA 175 + + + NI + + +T + Sbjct: 124 VCSSDGSTEIDPFTVPLDSINIDMNGKISYCTGGSTTPEDGGQIGLAMFNDLNRLINKGN 183 Query: 176 DSYNKKGS 183 + Y Sbjct: 184 NLYQYDNK 191 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 97/246 (39%), Gaps = 15/246 (6%) Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT 226 + A+ + K V D G ++ V +G + + + + +T Sbjct: 22 IGNNIANVNTTGYKSSRVQFKDVLG--QTIAGGQVASGVTIAGINKDFTQGSQTATENST 79 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 L + NG + + + +F + + + G + P Sbjct: 80 DLYIHGNGFFIVQDPGDPSI---LYYTRDGSFHVDDTGQLVNSLGYKVCSSDGSTEIDPF 136 Query: 287 D--LVSYQINDDGTVVGNYSNEQT-QLLGQIVLANFANNEGLASEGDNVWSATQ------ 337 L S I+ +G + T + GQI LA F + L ++G+N++ Sbjct: 137 TVPLDSINIDMNGKISYCTGGSTTPEDGGQIGLAMFNDLNRLINKGNNLYQYDNKPNTDG 196 Query: 338 -SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILN 396 + G G+ GT+ + LE SNVDL+ E NMI+ QR YQ+N++ I T D++L Sbjct: 197 SDPAEPIFGAPGSIGLGTVISNNLEMSNVDLTNEFSNMIITQRGYQANSKVITTSDEMLQ 256 Query: 397 TLVNLR 402 L+ L+ Sbjct: 257 ELIGLK 262 >UniRef50_A7H673 Flagellar hook protein n=8 Tax=Campylobacter jejuni RepID=A7H673_CAMJD Length = 875 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 111/313 (35%), Gaps = 20/313 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + VSGL A +DV GNNI+N T GFK A F MF+ + Sbjct: 4 SLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRGGQN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFY-SRNGQFKLD 103 ++GLGV V+ T+ + G+ T + DVAI+ +GFF + D G Y +R+G FKLD Sbjct: 64 PLQIGLGVSVSSTTRIHSQGSVQITDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFKLD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNI-SIPNTLMAAKTTTTASMQINLNSSD 162 N VN G + G+ +I P NI P + A +T +++ NLNS Sbjct: 124 AYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAQSTEVAIKANLNSGL 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 + T + S + + + Y D+ + Sbjct: 184 NIGTASTPLYSLDSVHGFNQKTGETKDENDVGTTQFYTTSKNAIEVAEKGVDAGALFNAK 243 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 L + G V A A + + N + NG Sbjct: 244 GQGLNLR-DGQGIWVSYTDAKYSTNKVGVNAFDPNLQQNQTVAFWGNGNQKTRLDIVING 302 Query: 283 YKPGDLVSYQIND 295 I++ Sbjct: 303 VVIQTDTIGSIDE 315 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 19/244 (7%) Query: 178 YNKKGSVTVFDSQGNAHDMSVYFVKT-----GDNNWQVYTQDSSDPNSIAKT-------A 225 + ++DS G+ H + V FVK G N WQ+ + A Sbjct: 631 SAFSAGLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINATGEGPNNIIV 690 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFL-----NSMQQNTGANNIVATTQ 280 T FN +G+L + + A LSF + + + A+ + Sbjct: 691 GTARFNNDGSLSNYNPRTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQAT 750 Query: 281 NGYKPGDL--VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 +GY G+L +++D G ++G ++N +T + ++ +A+ ANN GL G N++ T + Sbjct: 751 DGYPSGNLKPEGIRVDDKGNILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTAN 810 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG ++G AGTG G + ALE SNVDLS+ L +I+ QR YQ+N++TI T DQ+L TL Sbjct: 811 SGNIVVGEAGTGGRGEMKTAALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTL 870 Query: 399 VNLR 402 + L+ Sbjct: 871 IQLK 874 >UniRef50_C4XMS5 Flagellar hook protein FlgE n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMS5_DESMR Length = 550 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 128/348 (36%), Gaps = 55/348 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG--------SKVGLGVK 53 + VSGL A +T + IGNN+AN TYGFK F D+ + ++G GV+ Sbjct: 8 SMWSGVSGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIGRGVR 67 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-----SNGSVF--------YSRNGQF 100 V I D++ G T LD+AIS NGFF + SNG + Y+R G F Sbjct: 68 VGTIVSDYSQGGLETTSENLDMAISGNGFFMVKQKSQVGSNGKMLNTGNTTTYYTRAGDF 127 Query: 101 KLDENRNLVNMQGLQLTGYPATGTPP-----------TIQQGANPTNISIPNTLMAAKTT 149 D + LV QGL + G+ + +I + AK T Sbjct: 128 SFDSDGYLVTPQGLAVQGWKVDQDRIDAASASGTVLSQVPVTGEIQDIRLTQFTSPAKAT 187 Query: 150 TTASMQINLNSSDPLPTVTPFSAS-----------------NADSYNKKGSVTVFDSQGN 192 ++ +M L+S + + +Y + ++ V+D G+ Sbjct: 188 SSVTMVTQLDSDTTTQNTRTAGTNYYYAMTEQWDGTASPAMPSTAYGYQSTLKVYDENGS 247 Query: 193 AHDMSVYFVKT----GDNNWQVYTQ-DSSDPNSIAKTATTLEFNANGTLVDGAMANNIAT 247 H ++VY+ K G + W+ D S+ + + L+ ++ Sbjct: 248 PHTLTVYYDKVVSEDGKDYWEYCVTCDPSEDGRVDSAGNPIAGTETAGLLMTGTMTFDSS 307 Query: 248 GAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIND 295 G++ T S A+ +NGY ++D Sbjct: 308 GSLENMSAYTLQASNATG-GPFDATQWAAASVKNGYPVFTANFKSVSD 354 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 13/251 (5%) Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD----SSDPNS 220 F +S + ++ ++ G D + + + N + V+T + S + Sbjct: 299 TGTMTFDSSGSLENMSAYTLQASNATGGPFDATQWAAASVKNGYPVFTANFKSVSDASFT 358 Query: 221 IAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQ---------NTG 271 + A + FN + G T A L N Sbjct: 359 DSPNALNIAFNVGISNTTGFQPGATGTLLSAAAAHDPDELVSFNPSTTKVNSTVTTSYAT 418 Query: 272 ANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDN 331 +++ V ++QNGY G L S ++ DG + G +SN QTQ L + LANF N +GL+ +G N Sbjct: 419 SSSTVFSSQNGYTSGLLTSVSVDSDGILTGTFSNGQTQKLWALALANFTNLQGLSRQGSN 478 Query: 332 VWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQ 391 +++AT SG A TG+ G+++ LE SNVDL+ E+V+MI+ QR +++N++TI T Sbjct: 479 LYAATLDSGQGTTNRANTGSVGSISGNTLETSNVDLATEMVSMILTQRGFEANSKTITTV 538 Query: 392 DQILNTLVNLR 402 D +L+ ++ L+ Sbjct: 539 DSMLSEVIQLK 549 >UniRef50_C3XKG1 Flagellar hook protein FlgE n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XKG1_9HELI Length = 758 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 117/298 (39%), Gaps = 33/298 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 + VSG+ A LDV NNIAN T GFK A F+ M + +K Sbjct: 4 SLWSGVSGMQAHQIALDVESNNIANVNTTGFKYSRADFSTMVSQTKRSATIPYAGYGGVN 63 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLD 103 VGLG + T+ F G+ NT R D+A+ G F + ++ G S Y+R+G F D Sbjct: 64 DFSVGLGTGIETTTKIFEQGSLQNTDRKGDLALEGKGMFVVSNNGGYSNMYTRDGAFMFD 123 Query: 104 ENRNLVNMQGLQLTGYPAT----------GTPPTIQQGANPTNISIPNT-LMAAKTTTTA 152 NLVN G + G+ + + NI+I + AK T Sbjct: 124 AVGNLVNTSGFIVQGWVRDLSKLNCACGSDSLNRVDSTGPVGNITIDPRLTIPAKKTGVV 183 Query: 153 SMQINL---NSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYF-VKTGDNNW 208 INL N ++ + +P +S+A++Y G ++D+ H++ V D Sbjct: 184 VGNINLTSGNKTENIGCPSPLDSSSANNYVAGGLDRLYDTSDKQHEIPQDMGVMFNDAGE 243 Query: 209 QVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 + Q+ +TAT G + GA+ + + + + + Sbjct: 244 AMRLQEGQGIWISYQTATAEPLELGGNIPAGAVTTTVNINGQEITWTNDPTANGSSHL 301 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 13/252 (5%) Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 + + + +V ++DS GN H+ ++ F K GD+ W I Sbjct: 506 VEGGQVTTTAGLRMATFAQTVDIYDSLGNKHEFTMQFEKVGDSEWSFRIIVPEPAELIGS 565 Query: 224 T--------ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS-----MQQNT 270 + ++ F NG L+ ++ + P L F + + Sbjct: 566 SAQRPNILEGGSVTFGENGELLGVNPSSIQFKPNTGASFPQNIELDFGKGGGFDGLTSTS 625 Query: 271 GANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGD 330 + +GY G L Y + GT++G++ N Q L Q+ +A FAN EGL G Sbjct: 626 RESQAQNVNGDGYASGVLKEYYFDATGTLIGSFDNGQNLALAQVAIATFANYEGLQESGS 685 Query: 331 NVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 N+++ + +SG A +GTAGTG ++ LE SN DLS+ L +IV QR +Q+N+++I T Sbjct: 686 NLFAESANSGRATIGTAGTGGRASVAASKLEMSNADLSRGLTQLIVVQRGFQANSKSITT 745 Query: 391 QDQILNTLVNLR 402 DQ+LNTL+ L+ Sbjct: 746 ADQVLNTLLGLK 757 >UniRef50_C4XPF7 Flagellar hook protein FlgE n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPF7_DESMR Length = 518 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 123/310 (39%), Gaps = 34/310 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + VSGL + + GNN+AN T G+KS FADM + GS++G GV+ Sbjct: 3 SIWTGVSGLLTYSQGIATTGNNLANVNTVGYKSSRMLFADMISTMAGGTSDGSQIGTGVQ 62 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQN-GFFRLVD-SNGSVFYSRNGQFKLDENRNLVNM 111 V I G+ + D+AI+ G+F + D +N +Y+R G F D+N NL++ Sbjct: 63 VGSIALQTEVGSLQDASNSTDLAITGERGYFVVKDAANDKTYYTRAGDFNFDKNGNLMSA 122 Query: 112 QGLQLTGYPATGTPP-----------TIQQGANPTNISIPNTLMAAKTTTTASMQINLNS 160 G + G+ + T+I+I + + + T T + NL+S Sbjct: 123 TGCNVQGWAVDQDAILKAKRNNVILSEVPTTGTVTDITIKDFTIDPQATGTMEVVTNLDS 182 Query: 161 SDPLPTVTPFSA-------------SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN 207 + + + + + ++ ++DS G AH +VY+ KT DN+ Sbjct: 183 QSSVGELDATDPYFTMFKNYDATNDTPVADSDYQATIKIYDSNGVAHTATVYYSKTSDNS 242 Query: 208 WQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ 267 + Y + + T ++ A G + T + S S+ Sbjct: 243 GKEYWEYMVTVPPEEDGSATTSGTTKAGVLMVGTLTFSAQGVLENQTAFTPNGSDPTSLS 302 Query: 268 QNTGANNIVA 277 T A+ + Sbjct: 303 NWTQASLTSS 312 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 4/259 (1%) Query: 147 KTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN 206 TT+ + + + L N ++ GS S ++ V Sbjct: 260 SATTSGTTKAGVLMVGTLTFSAQGVLENQTAFTPNGSDPTSLSNWTQASLTSSGVPEFSA 319 Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAI---NGAEPATFSLSFL 263 ++ + S+ P+ T L +G+ G+ AN A G N + +L+ + Sbjct: 320 TFKSASNGSALPSQTIAFKTGLS-ATDGSWNSGSAANAGAIGTNAALNIGYNPSSTLNAV 378 Query: 264 NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNE 323 ++ ++Q+GY G++ + ++++G + G+++N QT+ L + LA+F N Sbjct: 379 YCTTNYATSSYTQTSSQDGYAKGEMTATNVDENGVIWGSFTNGQTKALYVLALADFTNPT 438 Query: 324 GLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQS 383 L G+N+ S T SG A +G A +G F ++ LE+SNVD++ E+VN+I+ QR +Q+ Sbjct: 439 DLYRNGNNLLSPTTESGKATVGRANSGVFDSIAGNTLESSNVDMASEMVNLIINQRAFQA 498 Query: 384 NAQTIKTQDQILNTLVNLR 402 N++ + T + ++ T + ++ Sbjct: 499 NSKVVTTAESLMETALQIK 517 >UniRef50_D1B5D3 Flagellar hook protein FlgE n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B5D3_SULD5 Length = 851 Score = 154 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 16/255 (6%) Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTG-----DNNWQVYTQDSSDP 218 S + + S ++DS G+ H + + KTG W V Sbjct: 597 TSGTATRSTQSLYMASLASSTDIYDSLGSKHTIRFQYTKTGFTETGGTEWSVTVTVPEPG 656 Query: 219 NSI------AKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF-----LNSMQ 267 + ++ FN++G+L N T L+F L+ + Sbjct: 657 DINLGEEPKNVVTGSIRFNSDGSLATYTPRNLTYTANNGSTANQIVQLNFGSVGQLDGIT 716 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLAS 327 ++ Q+GY GDL +++ GT++G+++N ++ L Q+ ++ F NN GL S Sbjct: 717 SFDKDSSTTNINQDGYTGGDLSGLSVDETGTIIGSFTNGRSFALAQVAMSTFTNNGGLES 776 Query: 328 EGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQT 387 +G N + T +SG + G AGTG G++ + +LE SNVDLS+ L +IV QR YQ+N++T Sbjct: 777 DGGNCYIQTSNSGDPVFGQAGTGGKGSVQSSSLEMSNVDLSRSLTQLIVIQRGYQANSKT 836 Query: 388 IKTQDQILNTLVNLR 402 I T D++LNTL+ L+ Sbjct: 837 ITTADEMLNTLLQLK 851 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 29/255 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A V+GL A +DV NNIAN T G+K A+F+++ + + Sbjct: 4 ALWAGVTGLQAHQIAMDVESNNIANVNTTGYKYSRANFSNLLSQTVSIATAPQGELGGKN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVF-YSRNGQFKLD 103 ++GLG ++ +T+ F G+ T + D+AIS +GFF + G+ + Y+RNG F D Sbjct: 64 SMQIGLGTTISTVTKIFEQGSIETTDKDTDLAISGDGFFVVSPDGGTTYKYTRNGDFSFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNI-SIPNTLMAAKTTTTASMQINLNSSD 162 N N V+ G + G+ I + +NI P A T+ S++ NL+S Sbjct: 124 ANGNFVDSNGYIIQGWLRDQETGQIDTTSPISNILITPGYTTPANATSIVSIKANLDSGT 183 Query: 163 PLPTVTPFSAS----------NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYT 212 + T S + D V D + + V ++ V Sbjct: 184 SVGTNKTSIYSLDSKSGWVDADNDGIMDAAEVHNEDDNADTIFNNNTEVYERGVDFGVLF 243 Query: 213 QDSSDPNSIAKTATT 227 + S+ T Sbjct: 244 DSDGEALSLTDGQGT 258 >UniRef50_C5BRS0 Flagellar basal body protein FlgE n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRS0_TERTT Length = 813 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 87/340 (25%), Positives = 142/340 (41%), Gaps = 52/340 (15%) Query: 115 QLTGYPATGTPPTIQQGANPTNISIPNTLMA-----AKTTTTASMQINLNSSDPLPTVTP 169 ++ +I G + M A + T+ Sbjct: 474 PVSAGNYDADNNSIVVGGSIELTLDEGYSMQNAVPDAVGIFQPFTSDPADPEFTDVTLNA 533 Query: 170 FSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK---------TGDNNWQVYTQDSSDPNS 220 F ++ +YN S+ V+DS G +H M+ YFV+ T N+W ++ Q Sbjct: 534 FDPTDQGTYNSATSMNVYDSLGVSHIMTQYFVRQEYDPNDPTTSPNHWVMHVQIDGRNVG 593 Query: 221 IAKTA-------------TTLEFNANGTL---------VDGAMANNIATGAINGAEPATF 258 T+ + FN NGTL + + + P Sbjct: 594 DPDTSLPPPANIEPTLASFNVFFNENGTLNELLTEDMLISNWVVLDQQGNPTGAMGPQNV 653 Query: 259 SLSFL----------------NSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN 302 Q+ ++ T Q+GY G L I+++G + Sbjct: 654 LAGGSIVIPEPPTSSNFVIELAGTSQSGTDFSVDDTDQDGYASGRLSGLAIDENGVIFAR 713 Query: 303 YSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEA 362 Y+N + Q L Q+ LA+F N +GL G+ +W+ + +SG +GT +G G + +GALE Sbjct: 714 YTNGEGQPLAQVALADFTNQQGLQPIGNTMWAESFASGPPNVGTPQSGALGAIQSGALEE 773 Query: 363 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 SNVDLS+ELV +I+AQRN+Q++A+TI+T DQ+ T++NLR Sbjct: 774 SNVDLSEELVRLIIAQRNFQASAKTIETADQVTQTIINLR 813 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 86/323 (26%), Positives = 132/323 (40%), Gaps = 14/323 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F+ A+SG+ AA+T+L V GNNIAN++T GFK A F D+FA S +G GV+ Sbjct: 1 MPFNTALSGIRAASTDLTVTGNNIANASTIGFKRSRAEFGDVFATSVLGAGANAIGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F G T LD+AI+ NGFF L D G+ YSR G F LD+ + N G Sbjct: 61 VEDVAQNFKQGNVAFTQNELDLAINGNGFFVLSD-QGTPVYSRAGTFGLDDQGYVTNNVG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +L G+ A T +I I + + + TT + L+S++P+ T + Sbjct: 120 ARLQGFQADSTGNI---SGISDDILIQTSNLPPRQTTLVESVLTLDSTEPVLQSTGRRFT 176 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + + D+ + F N++ S A + + N Sbjct: 177 TLGNVIGVTQAGLRDATTTNLTSN-TFTLPLANDFATTPMTFDIQLSGASSGKNGTVSIN 235 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 + +G A A + S F ++ Q A G G + Sbjct: 236 LDIGEGVPATINAFNDLRTLTGVINSQIFSPTLPQTAIDVVANAVDYGGGVYGI--EFTA 293 Query: 294 NDDGTVVGNYSNEQTQLLGQIVL 316 +G N + + QI L Sbjct: 294 LQEGEGSQIQINTPSANMNQIGL 316 >UniRef50_B1HQW6 Flagellar basal-body rod protein flgG (Distal rod protein) n=3 Tax=Bacillales RepID=B1HQW6_LYSSC Length = 322 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 108/316 (34%), Gaps = 36/316 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + +SGL T LDVIGNNIAN T GFK G F D+ + + Sbjct: 4 SMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRGGVN 63 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-------------- 90 +VGLG ++A I G+ TGRGLD+ I +GFF + D+NG Sbjct: 64 PQQVGLGSQLAAIDTIHGGGSLQGTGRGLDLGIEGDGFFMVADANGAPDPDSGFIGEEGF 123 Query: 91 -SVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTT 149 + ++RNG F +D N LVN G L G A P Sbjct: 124 NNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGEDIVMEADDDGINPDDAPIASGDEGAN 183 Query: 150 TTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNA----HDMSVYFVKTGD 205 + + + + + S G++ D GN + F G Sbjct: 184 LFDDDGVLDPEDGEVGPIRIPTTAKEISIGANGTIEYVDLNGNRKWAGQLIMAKFPNAGG 243 Query: 206 NNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNS 265 NS A A G +V G + + + E F + Sbjct: 244 LAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGFQAN 303 Query: 266 MQQNTGANNIVATTQN 281 + T ++ ++ N Sbjct: 304 TRIITTSDEVLQELVN 319 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 96/277 (34%), Gaps = 13/277 (4%) Query: 139 IPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSV 198 + T A T +N + + + + V Sbjct: 45 MSQTQAGASAATATRGGVNPQQVGLGSQLAAIDTIHGGGSLQGTGRGLDLGIEGDGFFMV 104 Query: 199 YFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNI-ATGAINGAEPAT 257 + + + N++ ++NG LV+ + + + A Sbjct: 105 ADANGAPDPDSGFIGEEGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGEDIVMEAD 164 Query: 258 FSLSFLNSMQQNTGANNIVATTQNGY------------KPGDLVSYQINDDGTVVGNYSN 305 + +G +G P I +GT+ N Sbjct: 165 DDGINPDDAPIASGDEGANLFDDDGVLDPEDGEVGPIRIPTTAKEISIGANGTIEYVDLN 224 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 + GQ+++A F N GLA G N + T +SG A A G + G +E SNV Sbjct: 225 GNRKWAGQLIMAKFPNAGGLAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNV 284 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 DLS+E MIVAQR +Q+N + I T D++L LVNL+ Sbjct: 285 DLSEEFTEMIVAQRGFQANTRIITTSDEVLQELVNLK 321 >UniRef50_B5J6Y8 Conserved domain protein n=3 Tax=cellular organisms RepID=B5J6Y8_9RHOB Length = 1412 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 79/315 (25%), Positives = 126/315 (40%), Gaps = 17/315 (5%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMF-------AGSKVGLGVK 53 M+F A++GLN A ++ NNIAN T GFK A F D+F + S +G G Sbjct: 1 MSFYTALTGLNGAQADIAASSNNIANVGTTGFKLSRAEFGDIFATSPLQNSTSSIGSGAI 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD--SNGSVFYSRNGQFKLDENRNLVNM 111 + G+ Q FT G + + LD+AIS GFF L ++ V Y+RNG F +D NRN+V+ Sbjct: 61 LKGVKQQFTQGNISASLNALDMAISGQGFFALKPSLTSTQVVYTRNGSFNVDNNRNVVDS 120 Query: 112 QGLQLTGYPATGTPPTIQ-QGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL------ 164 G L YP + + +P T + TT + +N+ ++ + Sbjct: 121 SGQFLLTYPVNEDGSVTAKDIDSAVPLRLPVTSGDPQGTTKVDLAVNVPANADVVTENQK 180 Query: 165 -PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAK 223 F ++++S+ S T+FD GN +VYF+KT N T I Sbjct: 181 FVDGYVFDPNDSESFTNSTSFTIFDDLGNPTIATVYFIKTQRANAADPTNKFETRLVIND 240 Query: 224 TATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 + + ++ + +S +Q Sbjct: 241 EVVPPNLVPAVVDDGRQIFIDQFGNQTTDVPDPSYFNTGRSSPLYKLDDLRTRVPSQPAA 300 Query: 284 KPGDLVSYQINDDGT 298 G+ + D+GT Sbjct: 301 LTGEASGFDFGDEGT 315 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 7/228 (3%) Query: 175 ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANG 234 V + G ++ + GD +D + L F+ G Sbjct: 1191 GSVPTIANLVQATNENGTPLFVN----EDGDIVESEPNNLVTDYFPLYLDEGELTFDKTG 1246 Query: 235 TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 L+ + + + S + Q ++ QNG+ G L I+ Sbjct: 1247 RLISPQGLTRYDSQSETFSISLDIDYSASS---QLATPFSVNNLDQNGFTSGRLDGLNID 1303 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 +G + NY+N Q + LG+IVLANF N GL G+ + T SSG ++G AGT FG+ Sbjct: 1304 SNGLLRANYTNGQNKPLGKIVLANFNNQNGLKQVGNATFVETASSGEPIIGEAGTEGFGS 1363 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 + +GALE SNVD+++ELVN+I AQRN+Q++++ I+T Q+ T++N+R Sbjct: 1364 IQSGALERSNVDITEELVNLITAQRNFQASSKAIETSTQLTQTIINIR 1411 >UniRef50_A4BEL5 Flagellar hook protein FlgE n=2 Tax=cellular organisms RepID=A4BEL5_9GAMM Length = 1472 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 97/349 (27%), Positives = 148/349 (42%), Gaps = 58/349 (16%) Query: 111 MQGLQLTGYP----------ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS 160 GL + GY A G ++ T+ S Sbjct: 1125 QDGLTVQGYTGTPPVTLGRGADAETNARIGGYVDIVLNEGYTMTEPDPRVAGLFNGLTES 1184 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGD--------NNWQVYT 212 S + F+ + ++YN+ S+TV+DS GN H + +++VK + N+W VY Sbjct: 1185 SFEEYVINEFNPDDPETYNESASLTVYDSLGNQHRLQLFYVKDPEDPARPQALNSWTVYA 1244 Query: 213 QDSSDPNSIAKT---------------------------------------ATTLEFNAN 233 Q + ++N Sbjct: 1245 QIDGENVGDPDASLPFPENIEPTYAEFKLYFNADGTLDEENTGEWLISNWDPVDENGDSN 1304 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 G +A + + + FS+SF Q G Q+GY G L +I Sbjct: 1305 GAYTSLNVAEGGSLPIPDPNTNSNFSVSF-GGTTQYGGPFARYNFQQDGYASGRLKDLEI 1363 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 +DDGT+ Y+N + Q+LGQ+ LA+FAN EGL G W + SG A +G GTG G Sbjct: 1364 DDDGTIYARYTNGEAQVLGQVALASFANMEGLNPVGQTEWQESFESGDATIGEPGTGLLG 1423 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 TL + ALE S VDLS++LV++I+AQRNYQ++A+TI+T + + T++NLR Sbjct: 1424 TLQSAALEDSTVDLSEQLVHLIIAQRNYQASAKTIETANAVTQTIINLR 1472 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 111/316 (35%), Gaps = 26/316 (8%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-------GSKVGLGVK 53 M+F +SG+ AA +L + GNNIAN++T GFK+ A F D + +G GV Sbjct: 1 MSFGSGLSGVAAANKDLKITGNNIANASTTGFKASRAEFGDAYTTSILGMGQDPIGSGVN 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F G + T LD+AI NGFF N SV Y+R+G F +D++ +V+ QG Sbjct: 61 VNNVGQKFEQGNISQTNSVLDLAIDGNGFFVTEYPNNSVTYTRSGIFGIDKDGYIVSNQG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L G+ T++ + + T Q+N+ + + + Sbjct: 121 ATLQGFGVNENGIV---SGILTDLRVDAGSQPPRGTHGVEAQVNVPAGANVLQSIGSTTR 177 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 V G A D + G + I Sbjct: 178 TTGLAVGVAQV------GPAQDTTTTLTPIG------IPTTEGTASQIVGGPIGFSGTVP 225 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 G + A+ I+ L+ + + + ++ I Sbjct: 226 GINFPWQPNTSQASSTIDFTLQGPNINGGLSPLTATVQPFSDSIIYDDVNDLVSSINASI 285 Query: 294 NDD----GTVVGNYSN 305 N D G V +N Sbjct: 286 NGDPDLAGKVQAVVNN 301 >UniRef50_D2R533 Flagellar basal body FlaE domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R533_9PLAN Length = 815 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 115/299 (38%), Gaps = 21/299 (7%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSK-------------- 47 A + A++G+ AA T +DV+GNN+ANS T GFK+ + FA F ++ Sbjct: 6 ALTTALTGMTAAETQIDVVGNNLANSQTVGFKASDSVFATQFLQTQSLGSGPTSGSGGTN 65 Query: 48 ---VGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 GLG +VA IT DFT GT + D+AI GFF + DS G Y+RNGQFK + Sbjct: 66 PRQTGLGTRVAEITPDFTQGTIEVSSNPSDLAIQGEGFFIVQDSQGEQVYTRNGQFKTNS 125 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + LV G ++ G+ P I + A+ T +Q L+ S + Sbjct: 126 DNELVTTTGQRVLGFGVDQDFEIQTTELVPLEI-PLGSAAVAQATQNVYLQGVLSPSGDV 184 Query: 165 PTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKT 224 S + D + ++ G + + Sbjct: 185 ADTAAVIQSATLG---DALIPRPDVDASTAAVAAIPSSAGTTSTHTQGAGGTHAEGAVYR 241 Query: 225 ATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGY 283 + +GT + ++ A + + +L+ L + + NI T G Sbjct: 242 YRITYVDDSGTESLASSEILVSVPAGDTLANNSITLNNLPAATGSYSQVNIYRTASGGS 300 Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 9/294 (3%) Query: 118 GYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADS 177 G T P Q +S A +A + P + +A Sbjct: 521 GETLTLAPGITIQDGQIRVVSNNGADNAISVDLSAFRITAPDGEVLTPNLGFGKIQDASG 580 Query: 178 YNKKGSVTVFDSQGNAHDMSVYFV---KTGDNNWQVYTQDSS-----DPNSIAKTATTLE 229 + V+D+ G ++ + V T + DSS D I+ + Sbjct: 581 QSAVADFLVYDTLGIPLNVRITAVLEEVTDSATTYRWFADSSSNSPLDGADISVGTGLVT 640 Query: 230 FNANGTLVDGAMA-NNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 F+ G LV ++ I ++P F + F +T +++ A+ Q+G G L Sbjct: 641 FDGQGNLVSVTNDRVSVERRNIPSSDPLEFRIDFSQVSGLSTETSSLAASRQDGSSAGTL 700 Query: 289 VSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAG 348 SY I +DG + G +SN ++ LGQ+ LA FAN GL G N+++ +SG+ + G G Sbjct: 701 TSYIIGEDGVIRGVFSNGVSRDLGQVRLARFANPAGLEQRGQNLFAQGVNSGLPVEGNPG 760 Query: 349 TGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G++ +GA+E SN D+ K L+++++A Y+ NA+ I ++L+ L+NLR Sbjct: 761 NDGMGSIISGAVELSNTDIGKNLIDLVLATTQYRGNARVITAAQELLDELLNLR 814 >UniRef50_Q21IK9 Flagellar basal body FlaE n=3 Tax=Bacteria RepID=Q21IK9_SACD2 Length = 804 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 91/328 (27%), Positives = 143/328 (43%), Gaps = 47/328 (14%) Query: 122 TGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKK 181 T + GA + +L A T Q + + F ++ +YN Sbjct: 477 GDTDAIVVGGAIDMVLEEGYSLENAVPQLTGIFQPFTANEFTPIVINAFDPTDQSTYNSA 536 Query: 182 GSVTVFDSQGNAHDMSVYFVKTG---------DNNWQVYTQDSSDPNSIAKTA------- 225 S+T++DS GN+H M+ YFVK N+W +Y + T Sbjct: 537 TSMTIYDSLGNSHVMTQYFVKQDYDATDPTSVPNHWVMYARIDDADVGDPDTTLPPPANT 596 Query: 226 ------TTLEFNANGTL---------VDGAMANNIATGAINGAEPATFSLSF-------- 262 + FN +G+L + + P Sbjct: 597 QPTLASYDVYFNEDGSLNTLLTSDMLISNWTPVDADGNPNGALGPQNILAGGTQTVVEPP 656 Query: 263 --------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQI 314 L Q ++ +QNG+ G L I D+GT+ ++N Q+ LGQ+ Sbjct: 657 TSSNFVISLEGTTQFGSEFSVNDISQNGFSTGRLSGLNIADNGTIFARFTNGQSLRLGQV 716 Query: 315 VLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNM 374 VLA+F+N +GL G+ +W+ T SG +GT G+ G + GALE SNVDLS++LVN+ Sbjct: 717 VLADFSNQQGLQPTGNTMWAETFESGSPNVGTPGSAALGAVQAGALEESNVDLSEQLVNL 776 Query: 375 IVAQRNYQSNAQTIKTQDQILNTLVNLR 402 I+AQRN+Q++A+TI+T D + T++NLR Sbjct: 777 IIAQRNFQASAKTIETADAVTQTIINLR 804 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 30/304 (9%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F A+SG+ AA+++L V GNNIAN++T GFK+ A F D++A S +G GV+ Sbjct: 1 MPFDTALSGIRAASSDLSVTGNNIANASTTGFKASRAEFGDVYATSVLGAGVNAIGSGVQ 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q F+ G T LD+AI+ NGFF + G Y+R G F LD+ +VN G Sbjct: 61 VQEVAQRFSQGNVGFTENELDLAINGNGFFVVSQ-QGETLYTRAGSFGLDDEGYVVNNTG 119 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 L G+ A G G +I I + +A + TT +NL Sbjct: 120 AVLQGFSADGAGNI---GGIQGDIRIQTSNLAPRQTTGVESLLNL--------------- 161 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 ++ + F + G A ++ +T + + + + ++ + Sbjct: 162 DSTEPVLQTIGAEFSTAGTAVGVTQIGRQTAEKSTLLMDAITFPIQNLDTNPIIFDITLA 221 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 G V I +I+ + S+ L +QQ + N + NG V + Sbjct: 222 GPTVGNNGTVTINLDSIDFST----SIDDLTELQQIVSSINSQLYSPNGGADPIDVVASV 277 Query: 294 NDDG 297 DG Sbjct: 278 GTDG 281 >UniRef50_C6BXM1 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM1_DESAD Length = 529 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 110/284 (38%), Gaps = 30/284 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------KVGLGVK 53 + +SG+ A + + +IGNN+AN T GFK SF D F + +VG GV Sbjct: 6 SMYNGISGIRAHSQAMSIIGNNLANGNTIGFKGARTSFEDSFYSAVNTGGGIGQVGHGVG 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSN-GSVFYSRNGQFKLDENRNLVNMQ 112 +A I DF G + +VAI GFF + + +Y+R G F ++ L + Sbjct: 66 IASIYGDFKQGPFEPSSEATNVAIGGKGFFTVRHPDTDGTYYTRAGNFIFNKQGVLTDPH 125 Query: 113 GLQLTGYPATGTPPTI--QQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP----- 165 G + G+ + PT+I + T+ +M +NL+S Sbjct: 126 GYVVQGWKVNPNSESGKPDIIGTPTDIKLDRFQSPPVRTSEIAMNVNLSSKAEDKCNVTG 185 Query: 166 ----------TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDS 215 AD Y + ++ FD G +HD+++YF D+ Sbjct: 186 QPFFSLHQTWNGKNNPPIPADRYAFQNTIKTFDESGTSHDLTIYFDPVKDSTVTT----D 241 Query: 216 SDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFS 259 + N + + T+ +G ++G + + TF+ Sbjct: 242 AAGNRVYEFIVTVPPGEDGRTINGTALKTTSAAGLLMTGTMTFN 285 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 11/297 (3%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 + G ++ + T+ G + I+ + + + N + ++ Sbjct: 240 TDAAGNRVYEFIV-----TVPPGEDGRTINGTALKTTSAAGLLMTGTMTFNPRGEMIGMS 294 Query: 169 PFSASNADSYNKKGS---VTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA 225 FS + + V S + F+ + N D Sbjct: 295 SFSLKGGATGGMQNLNNWVPSPMSDDGKPIFTANFLGKANAN---LATDPDANPITLDFG 351 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKP 285 + N + + T + N + +QNGY Sbjct: 352 LSNGSNPPTWSTPTPADASAVGNTLANIPNFTTPKRSASYSTSYDTGNARNSQSQNGYGA 411 Query: 286 GDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLG 345 G L + +++ DG V G YSN Q L + LANF N GL EG N++S+T+ SG AL G Sbjct: 412 GFLQAVEVDRDGVVTGRYSNGQVLDLYVLTLANFNNQYGLRREGGNLFSSTRDSGPALTG 471 Query: 346 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 AGTG G++ + LE SNVD+ E+V +I QR +Q+N++ I T DQ+L L+ L+ Sbjct: 472 RAGTGPLGSIASNKLEQSNVDVGDEMVKLITTQRGFQANSKAITTADQLLGELIQLK 528 >UniRef50_C1A537 Flagellar basal-body rod protein FlgG n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A537_GEMAT Length = 262 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A A +G+ A T +VI +N+AN T GFK A F D+ + Sbjct: 4 ALRAAATGMMAQQTRTEVIAHNLANVNTPGFKRSRAHFEDLLYQTVQGQQVLGENDTQIT 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 +VG G ++AG+ + G TGR LD+AI GFF++ +G YSR+G ++ Sbjct: 64 PAIQVGRGTRLAGVQRLHEQGPIEETGRNLDIAIEGEGFFQIQLPSGETAYSRDGSLQIS 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQI 156 + LV G L P I A+ +S + + +I Sbjct: 124 DQGVLVTSAGYALQ------PPVRIPDDASEFTVSATGVVSVRRGNDIQPTEI 170 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 97/266 (36%), Gaps = 11/266 (4%) Query: 137 ISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM 196 + T M A+ T T + NL + + + Y V Sbjct: 5 LRAAATGMMAQQTRTEVIAHNLANVNTPGFKRSRAHFEDLLYQTVQGQQVLGENDTQITP 64 Query: 197 SVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPA 256 ++ V G V P + G + +G + Sbjct: 65 AIQ-VGRGTRLAGVQRLHEQGPIEETGRNLDIAIEGEGFFQIQ-----LPSGETAYSRDG 118 Query: 257 TFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNE-QTQLLGQIV 315 + +S + + G P D + ++ G V N+ Q +G+I Sbjct: 119 SLQISDQGVLVTSAGYALQPPVR----IPDDASEFTVSATGVVSVRRGNDIQPTEIGRIE 174 Query: 316 LANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMI 375 LA FAN GL S G N+ + T +SG ++G G L +LE SNV++ +E+V MI Sbjct: 175 LARFANPSGLLSLGQNLLAPTAASGQPVVGYPNDAGMGRLQQNSLEGSNVEIVQEMVEMI 234 Query: 376 VAQRNYQSNAQTIKTQDQILNTLVNL 401 A R Y+ N++ IKT D++ N+ Sbjct: 235 AAMRAYEINSKAIKTADEMGQIANNI 260 >UniRef50_B8CYN8 Flagellar basal-body rod protein FlgG n=2 Tax=Bacteria RepID=B8CYN8_HALOH Length = 262 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 105/261 (40%), Gaps = 11/261 (4%) Query: 143 LMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 M A+ T ++ NL + + Y +SQG + + V Sbjct: 11 GMDAQQTNIDTISNNLANVNTTGFKKTRVNFQDLMYQHIRQPGTPNSQGGQIPVGIE-VG 69 Query: 203 TGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF 262 G S + +G L + G + + Sbjct: 70 HGVKVSATQKIFSPGNIQNTDNPLDILIEGDGFLQV-----LLPDGTLAYTRDGSLKRDS 124 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG-NYSNEQTQLLGQIVLANFAN 321 + + + G Y P D S I DGT+ + Q Q +GQI LA F+N Sbjct: 125 MGRIVTSDG----YPIQPEIYIPEDASSISITSDGTIAVEINGSNQPQQIGQIELARFSN 180 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL S G N++ T +SG ++GT G+ FGT+ G LE SNV + +E+VNMI AQR Y Sbjct: 181 PAGLNSIGRNLFKPTVASGDPIVGTPGSPGFGTIAQGFLEMSNVKVVEEMVNMIAAQRAY 240 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 + N++ I+ D++L T LR Sbjct: 241 EINSKAIQAADEMLRTASQLR 261 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 24/195 (12%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 A A +G++A TN+D I NN+AN T GFK +F D+ Sbjct: 4 ALWTAATGMDAQQTNIDTISNNLANVNTTGFKKTRVNFQDLMYQHIRQPGTPNSQGGQIP 63 Query: 46 --SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 +VG GVKV+ + F+ G NT LD+ I +GF +++ +G++ Y+R+G K D Sbjct: 64 VGIEVGHGVKVSATQKIFSPGNIQNTDNPLDILIEGDGFLQVLLPDGTLAYTRDGSLKRD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 +V G + I + A+ +I+ T+ + QI Sbjct: 124 SMGRIVTSDGYPIQ------PEIYIPEDASSISITSDGTIAVEINGSNQPQQIGQIELAR 177 Query: 164 LPTVTPFSASNADSY 178 ++ + + Sbjct: 178 FSNPAGLNSIGRNLF 192 >UniRef50_C1SLD6 Flagellar hook protein FlgE n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD6_9BACT Length = 829 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 66/355 (18%), Positives = 130/355 (36%), Gaps = 23/355 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + A+SGL+ +DV+GNNI+N T G+KSG A F DM + Sbjct: 4 SLYSAISGLSVNQQAMDVLGNNISNVNTVGYKSGRAVFEDMLSQTLVGSTAPSDTLGGTN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVD-SNGSVFYSRNGQFKLD 103 ++VGLG +AG+ F G+ +T D+AI +GFF + + + Y+R G F+ D Sbjct: 64 STQVGLGTSLAGVDTIFETGSMQSTSVNTDLAIQGDGFFVIKGAGSSDLLYTRAGDFRFD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQ-INLNSSD 162 + +LV G + G+ + +I + + A+ T+ + +D Sbjct: 124 TSGSLVTSSGFYVQGWMVDPDTGELLTEGTTEDIVLSSAYQTAQAKVTSEASLAGVLDTD 183 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIA 222 P++ + + + V+ G D++ + T+ N+ Sbjct: 184 ADPSIVSYPSLLHYADTGDSIFQVYSDDGANMDLADNESIKVKAHGTGMTEMGYIYNTSD 243 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNG 282 LV ++ A + + + GA + +G Sbjct: 244 VNLDLASDPQL--LVYINSNPVTLEYGVDFNTMAELANALETQLNTAAGAADFSVAVVDG 301 Query: 283 YKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 ++ + + ++S + LA+ ++ G D ++ +Q Sbjct: 302 TI--NVTRNTVVGANVSIDSFSGSPLLAVAMSDLASVYDDAGDTKSSDEMYYESQ 354 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 118/296 (39%), Gaps = 20/296 (6%) Query: 127 TIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTV 186 ++ + + I+ + + + A S T+ Sbjct: 533 SLDKNSGKLQITGEKGSPNEIDFVKFEVVGSGTYDTFYDYYEYNTVQEAKGGTLTTSQTI 592 Query: 187 FDSQGNAHDMSVYFVKTG--DNNWQVYTQDSSDP-----NSIAKTATTLEFNANGTL--- 236 +D+QGNAH + F + DN W++ D N + FNANG+ Sbjct: 593 YDAQGNAHTVQYNFEMSDSLDNVWKLTVSTPDDGAEISFNETTGNQVYMHFNANGSFNYL 652 Query: 237 -------VDGAMANNIATGAINGAEPATFSLSFLN---SMQQNTGANNIVATTQNGYKPG 286 + N G L + ++ + I Q+GY G Sbjct: 653 TTESGQRIASLSMNYDTGGGAGVVSDIEMDLGTAGKFDGIYISSDDSGITKAAQDGYATG 712 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 L S N +G ++G Y+N Q + QI A F N GL GD + + +SG +G Sbjct: 713 LLESTLFNSNGEIIGYYTNGQVATIAQIATATFTNPGGLTKVGDTTFQKSSNSGDPAIGR 772 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 GTG G + LE SNVDLS E VNMI QR +Q+N++ I T D++L L++L+ Sbjct: 773 PGTGFRGKVAAETLENSNVDLSTEFVNMITTQRGFQANSRVITTSDEMLQELMSLK 828 >UniRef50_Q2SDU1 Flagellar hook protein FlgE n=3 Tax=Gammaproteobacteria RepID=Q2SDU1_HAHCH Length = 651 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 41/330 (12%) Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPT--VTPFS 171 + G A T T+ + L T AS +L ++ F Sbjct: 322 FLVQGDDAAATSQTLSTALTDVVVGGGVNLTIQDGVTVASGTTDLFATFTGTPFVNNVFD 381 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVK------TGDNNWQVYTQDSS--------D 217 ++ ++YN S T++DS GN+H ++ +FVK T DN W +Y Sbjct: 382 PADENTYNHATSTTIYDSLGNSHVLTTFFVKEPQTATTPDNLWTMYALIDGQDIGDPLVT 441 Query: 218 PNSIAKTATTLEFNANGTL---------------VDGAMANNIATGAINGAEPATFSLSF 262 + + + +L F+ +G++ + N A G +N A+ T + Sbjct: 442 GGTPTRASYSLVFDQDGSINEVLSDDVLISNWTPLAPDGTPNGAEGPLNVADGGTLPIPD 501 Query: 263 ----------LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLG 312 L + Q A + QNG+ G L+ ++D G + Y+N ++++LG Sbjct: 502 PPTSSNFFVDLGTTTQYGSAFAVNDLQQNGFTTGRLIGLDVDDGGVIFARYTNGESKVLG 561 Query: 313 QIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELV 372 Q+ LANF + +GLA G+ W T +SG ++G+ GT + G + + +LE SNVDLS++LV Sbjct: 562 QVALANFNDIQGLAPVGETTWVETFNSGNPVIGSPGTASLGAIRSSSLEDSNVDLSEQLV 621 Query: 373 NMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 +I+AQRNYQ+NA+TI+T + I T++NLR Sbjct: 622 GLIIAQRNYQANAKTIETANAITQTIINLR 651 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 14/312 (4%) Query: 1 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS-------KVGLGVK 53 M F+ A++G+ AA+ +L+V GNNIAN++T GFK A F D++A S VG GV+ Sbjct: 1 MPFNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGDGVR 60 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQG 113 V + Q+F G + T GLD+AI+ GFF L +NG YSR G F +D+ N+VN G Sbjct: 61 VQKVRQEFAQGNLSFTENGLDLAINGEGFFILDTNNGDRRYSRAGAFGIDKEGNVVNSSG 120 Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 + L G+ A + ++ I +T +A TT +NL Sbjct: 121 MHLQGFVANDSGVV---SGVLGDLVIDDTSLAPDRTTRVDANLNL----DASEPVLLERG 173 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 ++ + + D+ + + + Q S+ +A + N Sbjct: 174 DSLTSDGLLIGQAVDATAAGTNGANGYAAQTITVTQADGSTSTVTIPANSSANEIAALFN 233 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 A A+ AT G A+ ++ + G N+ L+ + Sbjct: 234 NVDNIDAAASTRATITAAGFNNASGTMQVFINGVLFDGYTNLTDLGDAINSSSSLIGVRA 293 Query: 294 NDDGTVVGNYSN 305 DGT + N Sbjct: 294 VLDGTDLVVIDN 305 >UniRef50_Q0AYE2 Flagellar basal-body rod protein FlgG n=4 Tax=Bacteria RepID=Q0AYE2_SYNWW Length = 261 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 50/156 (32%), Positives = 65/156 (41%), Gaps = 17/156 (10%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A SG+ A N+D + +N+AN T GFK F D+ + Sbjct: 4 SLYTASSGMYAQQLNIDTLSHNMANVNTVGFKKQRLEFQDLLYQTIRRPAADEDRNEPVG 63 Query: 47 -KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLV-DSNGSVFYSRNGQFKLDE 104 VGLGVK A I F G T LDVAI+ FF + N + Y+R+G FK+D Sbjct: 64 LLVGLGVKPAAINTIFNTGNLQATENPLDVAINGTAFFGVKVAGNDELLYTRDGAFKIDA 123 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIP 140 N LV G L G Q A+ IS Sbjct: 124 NGQLVTADGNLLEGAGTFDEGAYDIQIASDGKISYM 159 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 9/189 (4%) Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN 274 ++ + + N N+ + F + + G Sbjct: 80 NTGNLQATENPLDVAINGTAFFGVKVAGND----ELLYTRDGAFKIDANGQLVTADG--- 132 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQT-QLLGQIVLANFANNEGLASEGDNVW 333 G QI DG + ++T + GQ+ L F N GL G N++ Sbjct: 133 -NLLEGAGTFDEGAYDIQIASDGKISYMIPGQETPEEAGQLKLFKFINPAGLQKIGKNLY 191 Query: 334 SATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ 393 AT +SG A + N +L G LE SNV + +E+VN+I AQR Y+ N++ I + D+ Sbjct: 192 RATPNSGEAEEWQPDSDNSVSLEAGYLEMSNVQIVEEMVNLITAQRAYEINSKVIISSDE 251 Query: 394 ILNTLVNLR 402 +L T NLR Sbjct: 252 MLQTAANLR 260 >UniRef50_Q7UII2 Flagellar hook protein FlgE n=1 Tax=Rhodopirellula baltica RepID=Q7UII2_RHOBA Length = 811 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 129/330 (39%), Gaps = 32/330 (9%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A + A++GL+AA T +DVIGNN+AN+ T GFKS A FA F + Sbjct: 6 ALTTALTGLSAAETQIDVIGNNLANAQTVGFKSSDAVFATQFLQTLSLGAGPSANNGGTN 65 Query: 47 --KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDE 104 ++GLGV+VA I + GT + D+AI +GFF++ ++G Y+RNG FKL+ Sbjct: 66 PRQIGLGVQVAEIAANHNQGTIEISSSSSDLAIQGDGFFQVQAADGEKLYTRNGIFKLNS 125 Query: 105 NRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPL 164 + LVN G +L GY P ++ T AK T S + L + Sbjct: 126 DAELVNATGQRLLGYGIDEQFRLQTDSLVPLSV-PLGTKTVAKATENVSFEGTLTPEGDV 184 Query: 165 PTVTPFS----------ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQD 214 T S S + D + + G ++ D Sbjct: 185 ATAGQVIESLHLGDSQVPRPDASGVSIESSPIADHTSVTGTVGAGSLPAGTYQYKFALVD 244 Query: 215 SSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANN 274 +S S A ANG + G + + G + N + A+ Sbjct: 245 ASGNESAPSAARAFTVGANGNVDLGNLPQDPLGGD---FPTVNIYRTGPNGTEFEYLASA 301 Query: 275 IVATTQNGYKPGDLVSYQINDDGTVVGNYS 304 T N L IN+D T+ GNY+ Sbjct: 302 AAGGTFNDDGSTALSGTPINED-TLTGNYT 330 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 9/298 (3%) Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +TG Q +S A +A + P + + Sbjct: 513 NNITGESGDLVAGAYIQDGKIRLVSNNGEANAVDIELSAFRLTDELGQISTPNLAFGTLQ 572 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFV---KTGDNNWQVYTQDSSDP-----NSIAKTA 225 A + V+DS G ++ V +T + DS D I Sbjct: 573 EAIGQSASSDFVVYDSLGVPINVRVSATLESRTDQATIYRWYADSPDNSVSGSTDITVGT 632 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGA-EPATFSLSFLNSMQQNTGANNIVATTQNGYK 284 ++F+ NG V + P F + F T + AT Q+G + Sbjct: 633 GLIQFDGNGNFVTATEETISINRQGLPSVSPMQFEMDFSLVSGLATDEATLAATQQDGSE 692 Query: 285 PGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALL 344 PG L S+ + +DGT+ G +SN ++ LGQ+ LA FAN GL + G N+++ ++G+ + Sbjct: 693 PGVLNSFIVGEDGTIRGVFSNGISRDLGQLQLARFANPAGLEARGLNLYAEGVNTGLPVT 752 Query: 345 GTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 G G GT+ GALE SN D+ K+LV +++A Y+ N++ I T Q+++ L+NLR Sbjct: 753 GQPGENGIGTVIGGALELSNTDIGKDLVELVLASTQYRGNSRVITTTQQLIDELLNLR 810 >UniRef50_O51715 Flagellar basal-body rod protein flgG n=70 Tax=Bacteria RepID=FLGG_BORBU Length = 265 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 91/254 (35%), Gaps = 21/254 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A A SG+ A N+D I NN++N T GFK A F D+ + Sbjct: 4 ALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENTLRP 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 +VG G K+A + F G +T DVAI +GF++++ +G+ Y+R+G FK+D Sbjct: 64 LGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSFKID 123 Query: 104 ENRNLVNMQGLQLTG---YPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS 160 NR LV QG ++ +P +I +T + +N Sbjct: 124 SNRELVTSQGYKVLPNILFPEEYIQNSITISEEGIVSVKIDTSNEPIELGQIEISRFINP 183 Query: 161 SDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNS 220 + + A S + + + G + V + Sbjct: 184 AGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQRAYE 243 Query: 221 IAKTATTLEFNANG 234 I A N G Sbjct: 244 INSKAIQTSDNMLG 257 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 9/261 (3%) Query: 143 LMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVK 202 M A+ ++ NL++ + + Y ++ + V Sbjct: 11 GMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENTLRPLG-NQVG 69 Query: 203 TGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSF 262 G T + +G + G +F + Sbjct: 70 HGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKI-----LLPDGTYAYTRDGSFKIDS 124 Query: 263 LNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGN-YSNEQTQLLGQIVLANFAN 321 + + G + + S I+++G V ++ + LGQI ++ F N Sbjct: 125 NRELVTSQGYKVLPNILFP--EEYIQNSITISEEGIVSVKIDTSNEPIELGQIEISRFIN 182 Query: 322 NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNY 381 GL++ G N++ T SG + G G+ G L G LE SNV +++E+V MIVAQR Y Sbjct: 183 PAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQRAY 242 Query: 382 QSNAQTIKTQDQILNTLVNLR 402 + N++ I+T D +L NL+ Sbjct: 243 EINSKAIQTSDNMLGIANNLK 263 >UniRef50_C0GJF5 Flagellar basal body rod protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF5_9FIRM Length = 259 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 A G+ A +DV +NIAN T G+K T F+D+ S Sbjct: 5 GLWNAAGGMRAQQQKIDVTAHNIANVNTTGYKKKTTLFSDLVYQSIERRGNAVEPAAAGE 64 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 VG+G KVA I D GT T R LD+AI +G+F++ G + Y+R+G F D Sbjct: 65 HPKTVGVGSKVAAIRSDLRPGTYLQTDRDLDMAIVGDGYFQITLPGGGMAYTRDGSFSRD 124 Query: 104 ENRNLVNMQGLQL 116 N+VN QG ++ Sbjct: 125 SEGNIVNSQGYRV 137 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 10/184 (5%) Query: 218 PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 P + +T L+ G DG + G + +FS ++ + G + Sbjct: 84 PGTYLQTDRDLDMAIVG---DGYFQITLPGGGMAYTRDGSFSRDSEGNIVNSQGYRVVFP 140 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQ 337 G + +G V Y + LG + LA F N GL GDN+ AT Sbjct: 141 QLPEGQY-----EVNVAPEGAVSAVYEDGTVVPLGMLQLAYFDNPHGLEQLGDNLLQATP 195 Query: 338 SSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNT 397 +SG ALL G G+ ++ G LE+SNVDL+ E+ +I+ QR+++ N++ ++T +++ + Sbjct: 196 ASGAALLAFPGEGSR--VSQGYLESSNVDLAAEMTQLIINQRSFELNSRALRTAEEMWSI 253 Query: 398 LVNL 401 L Sbjct: 254 ANQL 257 >UniRef50_B4U878 Putative uncharacterized protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U878_HYDS0 Length = 583 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 18/272 (6%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGL----------- 50 +F A+SGL+A L +I NN++N+ T G+K+ F ++ A VG+ Sbjct: 4 SFYNAISGLDAFNNYLSIISNNMSNADTIGYKAVNPIFENVVANVNVGINTLTDTLKSTI 63 Query: 51 ---GVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDS--NGSVFYSRNGQFKLDEN 105 GV V ++ G TG D+AI NG F L D G+VFY+RNGQF + + Sbjct: 64 YGAGVIVDSTQLNWQLGNFEQTGNNTDLAIQGNGLFILQDPANAGNVFYTRNGQFTISQQ 123 Query: 106 RNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLP 165 +VN GL+L GY + + P I IP A T NLNS+ P Sbjct: 124 GYMVNPDGLKLLGYKVDQSGSVVGTSLQPIYI-IPQQPPKATDLITYQQPTNLNSTAPSI 182 Query: 166 TVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTA 225 F+ N ++N + ++T FD+ GNA + YF KTG N W ++ + T+ Sbjct: 183 -TQAFNPLNTATFNYQNTLTTFDTLGNAIEGDTYFQKTGPNTWNYIYAENEKAAYYSNTS 241 Query: 226 TTLEFNANGTLVDGAMANNIATGAINGAEPAT 257 + + + + N P Sbjct: 242 GNVLYRNVAGTWQSTTISGGSLTWYNITTPPN 273 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 112/294 (38%), Gaps = 7/294 (2%) Query: 109 VNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVT 168 N G +T + T + T + + + + Sbjct: 293 TNSSGSMVTDWVVDVTTSSTTISYVVNPTKPAGGTQEWDTIGSGAANGFVPYNLSSGIGV 352 Query: 169 PFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTL 228 P ++ Y + + GN S V T + + + + Sbjct: 353 PIYTGSSTIYAATALLNFDPNTGNITTSSTIGVYTYPTSSSYEYFIGAQNPLVLGDGNIV 412 Query: 229 EFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDL 288 + + + + + + Q+ I A +Q+GY G+L Sbjct: 413 GNLNSASSQSTGGLAFGQLIGAKPTTSTSAGIIDNSYITQDASDFTITA-SQDGYSLGNL 471 Query: 289 VSYQI-NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 V+ + + DGTVVG YSN Q+ L ++ LA F + L +G N++++ + Sbjct: 472 VNVYVLSSDGTVVGVYSNGQSTPLYRVALAQFQDPNELIEKGSNLYTSIY---TPTILLP 528 Query: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 G+ + + +G LE SNVD+++ + ++ A+R+YQ+NA+ + + D +L +N+ Sbjct: 529 GSADI--IQSGMLEQSNVDIAQAYIQLVTAERSYQANAKVVTSSDNVLQATLNM 580 >UniRef50_Q31FL0 Flagellar hook protein FlgE n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FL0_THICR Length = 538 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 145/375 (38%), Gaps = 65/375 (17%) Query: 5 QAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKV--GLGVKVAGITQDFT 62 AVSGLNAA+ L VI NN+AN+ T G+KS A F+DMF G++ G GV+V ITQDFT Sbjct: 8 TAVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFSDMFYGAQSTPGNGVRVDSITQDFT 67 Query: 63 DGTTTNTGRGLDVAISQNGFFRLVDSNG--SVFYSRNGQFKLDENRNLVNMQGLQLTGYP 120 +GT T+TGR LD+AI +GFF L D G Y+RNG FKLD++ + + +G ++ GY Sbjct: 68 NGTITDTGRDLDMAIDGDGFFILEDRTGKYENVYTRNGSFKLDKDGYVTSQEGNKVQGYL 127 Query: 121 ATGTPPTIQQG---ANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASN--- 174 T + ++I + K+T + IN++ + + Sbjct: 128 LNPALSTERNPVFETTLSSIDLDELNKTPKSTDEMNYDINVDGEENNNVDATQTPIAGIE 187 Query: 175 ----------------------------ADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDN 206 + + V+D+ G H ++ F K Sbjct: 188 NSVGGDTALAGSALSNIEKLVAPETEVYGGYPDFSTNKIVYDTLGGEHRLTTNFYKRD-- 245 Query: 207 NWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSM 266 + + + L ++ A T + T + ++ Sbjct: 246 -------------VVTEANSDLTYDPLTDTYTQGAAGTGNTKYTSWLAQYTME-DYDDAT 291 Query: 267 QQNTGANNIVATTQNGYK---PGDLVSYQINDDG--------TVVGNYSNEQTQLLGQIV 315 Q + + A +G G + + + +G TV + + GQ Sbjct: 292 GQWVTSGHREAVPADGTASADAGIIYELRFDTNGNLIDTREPTVAALATGANSTPTGQDT 351 Query: 316 LANFANNEGLASEGD 330 N + G+ Sbjct: 352 ANNPLDPATWTPTGN 366 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 102/235 (43%) Query: 167 VTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT 226 +AS + + + + +V + TG N+ +++P A Sbjct: 304 PADGTASADAGIIYELRFDTNGNLIDTREPTVAALATGANSTPTGQDTANNPLDPATWTP 363 Query: 227 TLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPG 286 T +VD + M Q G+ N+ TQNGY G Sbjct: 364 TGNQPNMEWVVDSPITGANDPLGNPADALGVSIDVDFTKMTQFAGSYNLRGVTQNGYAIG 423 Query: 287 DLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGT 346 DLV DG + YSN ++ + Q+ +ANF + L G ++ + +SG +GT Sbjct: 424 DLVGVYTGKDGVIEARYSNGRSVPVAQLGMANFNDKNALEKLGGQSYAESFASGAVQIGT 483 Query: 347 AGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL 401 + +G++ GALE SNVD + ELV+MI QR YQ++AQ I+T + T++ L Sbjct: 484 SERNGYGSINAGALEYSNVDTAGELVHMIQTQRTYQASAQVIQTSQTLTQTILQL 538 >UniRef50_C4V4D1 Flagellar hook protein FlgE n=2 Tax=Selenomonas RepID=C4V4D1_9FIRM Length = 680 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 87/357 (24%), Positives = 129/357 (36%), Gaps = 30/357 (8%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG---------------- 45 + AVSGL T +DV+GNNIAN T GFK+ +FADM + Sbjct: 4 SMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASAPNGTIGGVN 63 Query: 46 -SKVGLGVKVAGITQDFTDGTTTNTGRGLDVAIS-QNGFFRLVDSNGSVFYSRNGQFKLD 103 ++GLG+ VA +T+G+ TG+ D+AIS +G F + FY+RNG F D Sbjct: 64 PKQIGLGMSVASTDLLYTNGSVQQTGKNTDIAISRGDGLFVVSKGQ-QKFYTRNGAFSFD 122 Query: 104 ENRNLV-NMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSD 162 NL GL + GY A ++ M A+TT TAS NLN++ Sbjct: 123 AEGNLTIPSTGLYVQGYMANNGVISVAGDNTTNIRIPAGKSMEAQTTATASYTKNLNATT 182 Query: 163 PLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDM-----SVYFVKTGDNNWQVYTQDSSD 217 P V AD + + G +Y + + Sbjct: 183 PGYEVANVLVRYADGTTQTTNSYAPSEVGKLVLTMDNGRKIYLDSSAPAQTVGSAPTGTL 242 Query: 218 PNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVA 277 +S T ++ N + ING+ AT + + S+ T A V Sbjct: 243 YSSTISNVTASTTGHVDAVLAMDSGNPSSPKEINGSATATITRTGATSLTSGTYAFGDVF 302 Query: 278 TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWS 334 G + S + VV T G +V N + ++ Sbjct: 303 -----NISGKITSVVSSPPSDVVLTLDANNTITPGTVVTVKVPNPNSFTYAVGDTYT 354 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 15/288 (5%) Query: 125 PPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSV 184 + G + KT ++ + SS ++ ++ + ++ Sbjct: 397 TGSATDGTIQSITRESVYQFGGKTVSSVVLNTKSGSSIDGLVGKDYARNDTFYPSVATTI 456 Query: 185 TVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTAT----------TLEFNANG 234 TV+DS G H + V F K +N W + D +I + L+F+ +G Sbjct: 457 TVYDSLGAKHSVPVVFTKASNNKWTLSLGSGGDTFNITEADGTTTTVALTKTDLKFDTSG 516 Query: 235 TLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQIN 294 + V G + ++ NGA P +++ ++ Q +G + I A +G+ G L S I+ Sbjct: 517 SYVSGTASLSLT--YENGAAPQQVAMNLA-AITQYSGTSTI-AADSDGHAAGTLASVDID 572 Query: 295 DDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGT 354 G + G Y+N Q QI +A F N GL G N++ + +SG + A Sbjct: 573 STGVITGTYTNGVRQKEAQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGT-E 631 Query: 355 LTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 LT ALE SNVDL+ + +MI+ QR +QSN++ I D++L TL+N++ Sbjct: 632 LTTSALEMSNVDLADQFSDMIITQRGFQSNSKMITVSDEMLETLINMK 679 >UniRef50_P0ABX7 Flagellar basal-body rod protein flgG n=108 Tax=Bacteria RepID=FLGG_ECO57 Length = 260 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 24/207 (11%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS--------------- 46 + A +GL+A TN+DVI NN+AN +T GFK A F D+ + Sbjct: 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLP 63 Query: 47 ---KVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLD 103 ++G GV+ + + G + T DVAI GFF+++ +GS Y+R+G F++D Sbjct: 64 SGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVD 123 Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 +N LV G Q+ TI A I + + A +Q+ + Sbjct: 124 QNGQLVTAGGFQVQ------PAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTT 177 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQ 190 T + + Y + S + Sbjct: 178 FMNDTGLESIGENLYTETQSSGAPNES 204 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 94/255 (36%), Gaps = 10/255 (3%) Query: 148 TTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN 207 T + N ++ A D + S S + TG Sbjct: 15 QQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRP 74 Query: 208 WQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQ 267 S S + + G + G+ +F + + Sbjct: 75 VATERLHSQGNLSQTNNSKDVAIKGQGFFQVM-----LPDGSSAYTRDGSFQVDQNGQLV 129 Query: 268 QNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQ-TQLLGQIVLANFANNEGLA 326 G A T P + +S I DG V + +GQ+ L F N+ GL Sbjct: 130 TAGGFQVQPAIT----IPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLE 185 Query: 327 SEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQ 386 S G+N+++ TQSSG T G G L G +E SNV++++ELVNMI QR Y+ N++ Sbjct: 186 SIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSK 245 Query: 387 TIKTQDQILNTLVNL 401 + T DQ+L L L Sbjct: 246 AVSTTDQMLQKLTQL 260 >UniRef50_D2L5W2 Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5W2_9DELT Length = 518 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 122/324 (37%), Gaps = 48/324 (14%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA---------GSKVGLGV 52 A VSG+ + + + NN+AN+ T G+KS FADM + S++G+GV Sbjct: 3 AIWTGVSGMLSYSQGIANTSNNLANTNTVGYKSSRMLFADMISELAGSTTDTNSQIGMGV 62 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQN-GFFRLVDS-NGSVFYSRNGQFKLDENRNLVN 110 +V ++ G + +D+AI G+F + D + +Y+R G F + + LV+ Sbjct: 63 QVGTVSMSTGVGAIATGDQSMDMAIDGEHGYFTVKDPVSDKTYYTRAGDFNFNTDGYLVS 122 Query: 111 MQGLQLTGYPATGTPPT-----------IQQGANPTNISIPNTLMAAKTTTTASMQINLN 159 G ++ G+ T + +PT+I I + + A+ T + SM NL+ Sbjct: 123 PTGNRVQGWAVDQAAVTQAERTGSVLPEVPVTGDPTDIRITDFTLPAQATGSVSMITNLD 182 Query: 160 SSDPLPTVTPFSA------------SNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNN 207 S + + + + V+D++G AH ++V + K D Sbjct: 183 SLTDPGILDATDPYCSMFKSYDAANTPPATAAYTSDIKVYDAEGGAHSLTVNYSKVTDTG 242 Query: 208 ----WQVYTQDSSDPNSIAKTA----------TTLEFNANGTLVDGAMANNIATGAINGA 253 W+ + + T TL F+A G L + + + Sbjct: 243 GKEYWEYMVTVPPADDGSSVTGGTSKAGVLMIGTLTFSAQGVLENQTAFTPTGGDPTDLS 302 Query: 254 EPATFSLSFLNSMQQNTGANNIVA 277 L Q + ++ Sbjct: 303 SWTQAPLDSTGVPQMSATFKSVSN 326 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 20/289 (6%) Query: 114 LQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSAS 173 +T PA + + I +A+ DP + A Sbjct: 249 YMVTVPPADDGSSVTGGTSKAGVLMIGTLTFSAQGVLENQTAFTPTGGDPTDLSSWTQAP 308 Query: 174 NADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNAN 233 + + S T + S + + + + P+S A Sbjct: 309 LDSTGVPQMSATFKSVSNGSVLSSQTMGFKTGLSASGASWNPNGPSSAAD---------I 359 Query: 234 GTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQI 293 GTL + ++ A ++ A +Q+G+ G L S + Sbjct: 360 GTLAAANAGFDPSSTRNAVA-----------CTTSYATSSYTQAQSQDGFASGTLNSTSV 408 Query: 294 NDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFG 353 +++G V G +SN QT+ L + LA+F N L EG+N+ SAT SG A G A +G + Sbjct: 409 DENGVVSGTFSNGQTKDLYVLALADFRNPTDLRREGNNLLSATTESGAATTGRANSGIYD 468 Query: 354 TLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 ++ +LE+SNVD++ E+VN+I QR +QSN++ + T D ++ + ++ Sbjct: 469 GISGYSLESSNVDMATEMVNLITLQRAFQSNSKVVTTADTMMEKALEIK 517 >UniRef50_B8J087 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J087_DESDA Length = 808 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 43/272 (15%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA--------GSKVGLGVK 53 + +VSGL + ++V+GNNIAN +T GFKS F D S++G G Sbjct: 6 SMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGAS 65 Query: 54 VAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNG-SVFYSRNGQFKLDENRNLVNMQ 112 V I DF+ G+ +T D+AI NGFF++ N ++Y+R G F +++R L N + Sbjct: 66 VYAILGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPE 125 Query: 113 GLQLTGYPATGT------------------PPTIQQGANPTNISIPNTLMAAKTTTTASM 154 G L G+ PT+I + + + + TT + Sbjct: 126 GYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQTTNVTF 185 Query: 155 QINLNSS--------DPLPTVTPFSASNADS--------YNKKGSVTVFDSQGNAHDMSV 198 + L + + P F +A S Y + S+ V+D G H ++V Sbjct: 186 TMGLTNDGKGDRTTSNTSPMTALFDLWDASSKPPLADTAYATQSSIDVYDEGGGTHTLTV 245 Query: 199 YFVKTGDNNWQVYTQDSSDPNSIAKTATTLEF 230 Y+ + D + T E+ Sbjct: 246 YYDQVDARKTDSNGNTIYDIKGLPAGYTIYEY 277 Score = 147 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 108/277 (38%), Gaps = 3/277 (1%) Query: 126 PTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVT 185 T G N + D L + + + + + Sbjct: 534 NTTVVGGNTVPAYQDSYGYYHIGANGPVYGQTPGGVDVLHDSGGYYLDDGTVPHNYITTS 593 Query: 186 VFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNI 245 F + + D + ++ + + + T +GT G Sbjct: 594 DFTAITATAFKPTAYTAPTDAS---RPVADTETANSSLASLTTMSRVSGTSPTGVPVFEN 650 Query: 246 ATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSN 305 T + NT + + TQ+GY G L + I++ G V G YSN Sbjct: 651 VINYGTTIPTMTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSN 710 Query: 306 EQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNV 365 +T L QI L +F N++GL EG N++SAT SG LG AG FG +E SNV Sbjct: 711 GKTIPLYQIALYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNV 770 Query: 366 DLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR 402 D++ E V MI QR +Q+N++ I T D +L T++ ++ Sbjct: 771 DMTTEFVQMISTQRGFQANSKGITTVDTMLETVIGMK 807 >UniRef50_Q1PUJ3 Similar to flagellar hook protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUJ3_9BACT Length = 532 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 104 ENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDP 163 + V+ + T T G+ +S ++ TT +++L+ SD Sbjct: 229 NDGTTVDDLLAYINTNAFGDTTGTAGDGSAFATLSSSGKIIVTSTTA-GEDELSLSISDS 287 Query: 164 LPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVY-TQDSSDPNSIA 222 ++ + + S T++DSQG H++++ F+K D W + + S+D Sbjct: 288 STATGTWTNYSLKASTYTTSTTIYDSQGTGHNVTLSFIKKNDGEWDMRASMPSADGTITT 347 Query: 223 KTATTLEFNANGTLVDGAMANNIATGAINGAEPAT----FSLSFLNSMQQNTGANNIVAT 278 T + + FN +G+L + + + Q+ +++ A+ Sbjct: 348 DTISAITFNDDGSLKSSGDTTLTFKFDGITTSQTVKFKLGTFGKTDGIYQSGKGSSVTAS 407 Query: 279 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 Q+G + G S+ ++ DGT+ YSN + + Q+ LA F N +GL GDN++ T S Sbjct: 408 EQDGSESGSFSSFSVDTDGTMYALYSNGTSSKIAQLQLATFGNVQGLRRSGDNLYEQTDS 467 Query: 339 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 SG L T GTG+ G + NG LEASNVD++ EL ++I+AQR +Q N++ I T D++L Sbjct: 468 SGEPLYTTGGTGSAGDIYNGYLEASNVDMTSELTSLIMAQRGFQLNSRVISTADEVLAEA 527 Query: 399 VNLR 402 VNL+ Sbjct: 528 VNLK 531 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 102/274 (37%), Gaps = 13/274 (4%) Query: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGS---------KVGLGV 52 A V+G+ + + LDVIGNN++N TYG+KS F+D+ + ++G+GV Sbjct: 6 ALYAGVTGIRSHQSWLDVIGNNLSNINTYGYKSSRLLFSDLISQDKGSGGVNPMQIGMGV 65 Query: 53 KVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNM- 111 KV I+ F+ GT T D AI +GFF +++ F+SR G F D + LV+ Sbjct: 66 KVGSISSLFSQGTLEATNNEFDFAIQGDGFF-VLNGGNKNFFSRVGTFATDASNQLVDST 124 Query: 112 QGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFS 171 G Q+ ++G TI G++ + + +T S + Sbjct: 125 TGYQIL--DSSGKTITIPYGSSVSATKTSTMTLTGTLESTPSSSSGEVLILSSALTSSSV 182 Query: 172 ASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFN 231 A+ + D +++ + + + V + + N Sbjct: 183 AATGATTLNALDTNTTDYTSGTDIITISYTEPDGTSGSVDFTYGAANDGTTVDDLLAYIN 242 Query: 232 ANGTLVDGAMANNIATGAINGAEPATFSLSFLNS 265 N A + + A + S Sbjct: 243 TNAFGDTTGTAGDGSAFATLSSSGKIIVTSTTAG 276 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.130 0.373 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,337,450,855 Number of Sequences: 3077464 Number of extensions: 113825944 Number of successful extensions: 295881 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2703 Number of HSP's successfully gapped in prelim test: 2275 Number of HSP's that attempted gapping in prelim test: 276569 Number of HSP's gapped (non-prelim): 16307 length of query: 402 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 271 effective length of database: 637,248,572 effective search space: 172694363012 effective search space used: 172694363012 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 94 (40.8 bits)