41 c1uokA_ Probab=100.00  E-value=0  Score=519.44  Aligned_columns=396  Identities=24%

Q ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
Q ss_conf             87110564278886212347886537667677777655457468738999863475897499799988950265333465
Q batch____       182 APFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGG  261 (676)
Q Consensus       182 ~~~~w~~~~iY~i~~drF~nGd~~Nd~~~~~~~~~~~~~~~~~GGDl~GI~~KLDYLk~LGV~aIwLsPi~~~~~~~~~~  261 (676)
                      .|.||+++|||||+|+||.++|.++.                  |||+||++||||||+||||+|||+||++++.     
T Consensus         2 ~~~W~~~~viY~i~~~~F~d~~~~~~------------------Gd~~gi~~~Ldylk~LGv~~I~L~Pi~~~~~-----   58 (558)
T c1uokA_           2 EKQWWKESVVYQIYPRSFMDSNGDGI------------------GDLRGIISKLDYLKELGIDVIWLSPVYESPN-----   58 (558)
T ss_dssp             CCCHHHHCCEEEECGGGTCCSSSSSS------------------CCHHHHHTTHHHHHHHTCCEEEECCCEECCC-----
T ss_pred             CCCHHHCCEEEEEECCCCCCCCCCCC------------------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCC-----
T ss_conf             62114028899982444114899888------------------7699999745879972998999988664889-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             55555676788885655431047345899999999999998899899997125457731000000000112346655556
Q batch____       262 GTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKK  341 (676)
Q Consensus       262 ~~~~~~p~~~~HGY~~~Dy~~IDp~fGT~eDfk~LV~~aH~rGIkVIlD~V~NHts~~~~~~~~~~~~~~~~~~~~~~~~  341 (676)
                               .||||+++||++|||+|||++|||+||++||++||+||||+|+||||.++.|+..                
T Consensus        59 ---------~~~GY~~~d~~~id~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~----------------  113 (558)
T c1uokA_          59 ---------DDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVNHTSDEHNWFIE----------------  113 (558)
T ss_dssp             ---------TTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHH----------------
T ss_pred             ---------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH----------------
T ss_conf             ---------8898463513234645589999999999999989989999952456785544565----------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             66545323356777655444466777886543111256542235677666564101355454764344462112333334
Q batch____       342 SLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFY  421 (676)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~lpdln~~~~~~~~~~~~~  421 (676)
                           ...........|+.+....+..++..+...+....+...    +.......+.+...+++||+.           
T Consensus       114 -----~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ln~~-----------  173 (558)
T c1uokA_         114 -----SRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYD----EMTDEYYLHLFSKKQPDLNWD-----------  173 (558)
T ss_dssp             -----HTTCTTCTTGGGBCEECCSSSSCSSCBBCTTSSBSEEEE----TTTTEEEECSSCTTSCBBCTT-----------
T ss_pred             -----HHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC----CCCCCEEECCCCCCCCCCCCC-----------
T ss_conf             -----302788776673452378888887555545587754446----766743520677876013788-----------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCC----------------------------HHHHHHH
Q ss_conf             578873111578889999999999999985299889973553059----------------------------8899999
Q batch____       422 KNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVE----------------------------LPAWQQL  473 (676)
Q Consensus       422 ~~~~~~~~~~~~n~~V~~~l~~~~~~Wi~~~giDGfRiD~v~~i~----------------------------~~fw~~~  473 (676)
                                  |+.|+++|++++++|+ ++||||||+|+++++.                            .++|+++
T Consensus       174 ------------~p~v~~~i~d~~~~w~-e~gvDGfRlD~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (558)
T c1uokA_         174 ------------NEKVRQDVYEMMKFWL-EKGIDGFRMDVINFISKEEGLPTVETEEEGYVSGHKHFMNGPNIHKYLHEM  240 (558)
T ss_dssp             ------------SHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCCCTTCCCCCCCCSSCBCCGGGTTTCTTHHHHHHHH
T ss_pred             ------------CHHHHHHHHHHHHHHH-HCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             ------------9999999999999998-569989998538763120044433332211112232346760147999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH----CCCCCEEECHHHHHHHHHHH--------HHHHHH
Q ss_conf             998899999999985762014797799984317824556664----13766322648999988776--------449999
Q batch____       474 KTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYY----RHGFDAMINFDYQEQAAKAV--------DCLAQM  541 (676)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~----~~g~d~~~nf~~~~~~~~~~--------~~~~~~  541 (676)
                      +..+++               .+++++++|.+.........+    ...+++.+++..........        ......
T Consensus       241 ~~~~~~---------------~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (558)
T c1uokA_         241 NEEVLS---------------HYDIMTVGEMPGVTTEEAKLYTGEERKELQMVFQFEHMDLDSGEGGKWDVKPCSLLTLK  305 (558)
T ss_dssp             HHHTGG---------------GSCCEEEEECTTCCHHHHHHHHCGGGCSCSCEECCGGGSTTEETTEEEEECCCCHHHHH
T ss_pred             HHHHHH---------------CCCEEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf             999863---------------59828998635899878754127877750210274113545530134554456899999


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHHHHH-----------HHHHHHHHHHHCCCEEEECCHHCCCCCCCCCCCC----
Q ss_conf             9999987742148831896367876899999-----------9999999998079809987724166899999886----
Q batch____       542 DTTWQQMAEKLQGFNVLSYLSSHDTRLFREG-----------GDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDP----  606 (676)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~fl~nHD~~r~~~r-----------~~~a~~~llt~pGiP~IYYGdEiG~~~~~~~~d~----  606 (676)
                      ................++|++|||+.|..++           .+++++++|++||+|+||||+|+|+.........    
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~nhD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~p~i~~G~E~g~~~~~~~~~~~~~~  385 (558)
T c1uokA_         306 ENLTKWQKALEHTGWNSLYWNNHDQPRVVSRFGNDGMYRIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYRD  385 (558)
T ss_dssp             HHHHHHHHHTSSSSCCEECSCCTTSCCHHHHTSCSSTTHHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCCSSGGGCCC
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCC
T ss_conf             99998873135677034222578886443322784024689999999999980897246654253114778887101246


Q ss_pred             -----------------------------CCCCCCCCCCCCC--------------------------CCCHHHHHHHHH
Q ss_conf             -----------------------------7675687883324--------------------------743058999999
Q batch____       607 -----------------------------LQGTRSDMNWQDV--------------------------SGKSAASVAHWQ  631 (676)
Q Consensus       607 -----------------------------~~~~R~~m~W~~~--------------------------~~~~~~l~~~yk  631 (676)
                                                   +..+|.+|+|+..                          ..+.++++++||
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~m~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  465 (558)
T c1uokA_         386 IETLNMYKEKVMERGEDIEKVMQSIYIKGRDNARTPMQWDDQNHAGFTTGEPWITVNPNYKEINVKQAIQNKDSIFYYYK  465 (558)
T ss_dssp             HHHHHHHHHHHHTSCCCHHHHHHHHHHHCGGGGTSCCCCCSSTTTTSCSSCCSSCCCGGGGTSSHHHHHHCTTSHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHH
T ss_conf             22211100001002343100012212357666544546788765676666655445865222687774007558999999


Q ss_pred             HHHHHHHHCHHHHCCEEEEE--EECCEEEEEEEECCEEEEEEEC
Q ss_conf             99999774854416827999--3099099999848937999976
Q batch____       632 KISQFRARHPAIGAGKQTTL--LLKQGYGFVREHGDDKVLVVWA  673 (676)
Q Consensus       632 kL~~lRk~~pAL~~G~~~~l--~~~~~~af~R~~~de~vlVv~~  673 (676)
                      +|++|||+||||+.|+++.+  .+++++||.|+++++++|||++
T Consensus       466 ~Li~lR~~~~~l~~g~~~~~~~~~~~vla~~R~~~~~~~lvv~N  509 (558)
T c1uokA_         466 KLIELRKNNEIVVYGSYDLILENNPSIFAYVRTYGVEKLLVIAN  509 (558)
T ss_dssp             HHHHHHHHCHHHHHCEEEEESTTCSSEEEEEEEETTEEEEEEEE
T ss_pred             HHHHHHHHCHHHCCCCEEEEECCCCCEEEEEEEECCEEEEEEEE
T ss_conf             99999863810138956999728997899999739917999998