4 c1cygA_ Probab=100.00  E-value=0  Score=634.01  Aligned_columns=409  Identities=26%

Q ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH--HHHHCCCCEEEECCCCCCCCCCC
Q ss_conf             8711056427888621234788653766767777765545746873899986347--58974997999889502653334
Q batch____       182 APFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLD--YLQQLGVNALWISAPFEQIHGWV  259 (676)
Q Consensus       182 ~~~~w~~~~iY~i~~drF~nGd~~Nd~~~~~~~~~~~~~~~~~GGDl~GI~~KLD--YLk~LGV~aIwLsPi~~~~~~~~  259 (676)
                      .|++|++++|||||||||+|||++||+.....+.+..+...||||||+||++|||  |||+||||+|||||||++.....
T Consensus         5 ~~~~w~~~~iY~i~~drF~~g~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLd~pYl~~LGv~~i~l~P~~~~~~~~~   84 (680)
T c1cygA_           5 NKVNFTSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVM   84 (680)
T ss_dssp             CTTCCTTCCEEEECGGGTCCSCGGGCCCGGGBCGGGCSTTSBCCCCHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCC
T ss_pred             CHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf             81564157469993200137888888766556667655444157859999976288779972998999877514666555


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCC
Q ss_conf             65555556767888856554310473458999999999999988998999971254577310000000001123466555
Q batch____       260 GGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEV  339 (676)
Q Consensus       260 ~~~~~~~~p~~~~HGY~~~Dy~~IDp~fGT~eDfk~LV~~aH~rGIkVIlD~V~NHts~~~~~~~~~~~~~~~~~~~~~~  339 (676)
                      .....+.    +||||++.||++|||+|||++|||+||++||+||||||||+|+||||..+.+...+......+......
T Consensus        85 ~~~~~~~----~~~GY~~~d~~~id~~~Gt~~dfk~lV~~aH~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~  160 (680)
T c1cygA_          85 NDASGSA----SYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLL  160 (680)
T ss_dssp             SSSSCCC----STTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEE
T ss_pred             CCCCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             5666767----777756562433563328999999999999988988999996233688775432000157345465304


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             56665453233567776554444667778865431112565422356776665641013554547643444621123333
Q batch____       340 KKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPV  419 (676)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~lpdln~~~~~~~~~~~  419 (676)
                      ....+.....+.......|...                                .....+.+..+||||++         
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~dln~~---------  199 (680)
T c1cygA_         161 GGYTNDANMYFHHNGGTTFSSL--------------------------------EDGIYRNLFDLADLNHQ---------  199 (680)
T ss_dssp             ECSTTCTTCCBCCSCBCCCSSH--------------------------------HHHHSSBSTTEEEBCTT---------
T ss_pred             CCCCCCCCCCCCCCCCCCCCCC--------------------------------CCCEECCCCCCCCCCCC---------
T ss_conf             6788765665336688755665--------------------------------63100577888854689---------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             34578873111578889999999999999985299889973553059889999999889999999998576201479779
Q batch____       420 FYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFW  499 (676)
Q Consensus       420 ~~~~~~~~~~~~~~n~~V~~~l~~~~~~Wi~~~giDGfRiD~v~~i~~~fw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (676)
                                    |++|+++|++++++|+ ++||||||||++++++.+||+++...++..               .+.+
T Consensus       200 --------------n~~v~~~~~~~~~~w~-~~giDGfR~D~~~~~~~~~~~~~~~~~~~~---------------~~~~  249 (680)
T c1cygA_         200 --------------NPVIDRYLKDAVKMWI-DMGIDGIRMDAVKHMPFGWQKSLMDEIDNY---------------RPVF  249 (680)
T ss_dssp             --------------SHHHHHHHHHHHHHHH-TTTCCEEEESCGGGSCSHHHHHHHHHHHHH---------------CCCE
T ss_pred             --------------CHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHHHHHHHHHHHHHH---------------CCEE
T ss_conf             --------------9999999999999998-445883776141038998999999998621---------------8808


Q ss_pred             EEEEECCCCH----HHHHHHCCCCCEEECHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCE-EEEECCCCHHHHH
Q ss_conf             9984317824----5566641376632264899998877644----99999999987742148831-8963678768999
Q batch____       500 MTGEAWGHGV----MQSDYYRHGFDAMINFDYQEQAAKAVDC----LAQMDTTWQQMAEKLQGFNV-LSYLSSHDTRLFR  570 (676)
Q Consensus       500 ~~gE~~~~~~----~~~~~~~~g~d~~~nf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~fl~nHD~~r~~  570 (676)
                      +++|.|....    ....+...+++++++|.+...+...+..    ...+...+............ ++|++|||+.|+.
T Consensus       250 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~nHD~~R~~  329 (680)
T c1cygA_         250 TFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFNQMIQDTASAYDEVLDQVTFIDNHDMDRFM  329 (680)
T ss_dssp             EEECCCCCTTCCCHHHHHHHHHSSCEEBCHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHCTTGGGCEECSCCTTSCCSC
T ss_pred             EEEEEECCCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
T ss_conf             99986447753220133303677714542079999999860487789999999988764188624328960578755032


Q ss_pred             ------HHHHHHHHHHHHHCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHH
Q ss_conf             ------99999999999807980998772416689999988676756878833247430589999999999977485441
Q batch____       571 ------EGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIG  644 (676)
Q Consensus       571 ------~r~~~a~~~llt~pGiP~IYYGdEiG~~~~~~~~d~~~~~R~~m~W~~~~~~~~~l~~~ykkL~~lRk~~pAL~  644 (676)
                            .++++|++++|++||+|+||||||+||.+..++.+     |.+|+|.+   ...+++++||+|++|||+||||+
T Consensus       330 ~~~~~~~~~~~a~~~~l~~pG~P~iyyG~E~g~~~~~~~~~-----r~~~~~~~---~~~~~~~~~~~L~~lR~~~~al~  401 (680)
T c1cygA_         330 IDGGDPRKVDMALAVLLTSRGVPNIYYGTEQYMTGNGDPNN-----RKMMSSFN---KNTRAYQVIQKLSSLRRNNPALA  401 (680)
T ss_dssp             CTTCCTHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGG-----GCCCCCCC---SCSHHHHHHHHHHHHHHHCHHHH
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCCCCC-----CCCCCCCC---CCCHHHHHHHHHHHHHHHCHHHH
T ss_conf             31799999999999999908971999563524368768654-----32158898---88589999999999987683221


Q ss_pred             CCEEEEEEECC-EEEEEEEECCEEEEEEEC
Q ss_conf             68279993099-099999848937999976
Q batch____       645 AGKQTTLLLKQ-GYGFVREHGDDKVLVVWA  673 (676)
Q Consensus       645 ~G~~~~l~~~~-~~af~R~~~de~vlVv~~  673 (676)
                      .|.++.+..++ ++||.|+++++++|||++
T Consensus       402 ~G~~~~~~~~~~v~af~R~~~~~~~~v~~N  431 (680)
T c1cygA_         402 YGDTEQRWINGDVYVYERQFGKDVVLVAVN  431 (680)
T ss_dssp             HCEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred             CCEEEEEEECCCEEEEEEECCCCEEEEECC
T ss_conf             571789950794899999629942998404