112 c3mi6A_ Probab=98.86   E-value=9.8e-06  Score=55.87  Aligned_columns=324  Identities=14%

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
Q ss_conf             68999974587997299899998866477998874535233336555899999999999998899899999534547865
Q batch____        31 DLRGVIQHLDYLHKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQH  110 (551)
Q Consensus        31 d~~gl~~~Ldylk~LGv~~i~L~Pi~~~~~~~~GY~~~d~~~id~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~  110 (551)
                      |.+.+.+.++-.+++|+.-..|--=.-.+..++--..-||..-..+|..  .|+.|++.+|++||+.-+=+-+--++.++
T Consensus       344 ~~~~l~~la~~Aa~lG~E~fVlDDGWf~~r~dd~~~LGDW~~~~~kfP~--Gl~~l~d~v~~~Gm~fGlW~EPEmV~~~S  421 (742)
T c3mi6A_         344 NEAKLXTIVNQAKRLGIEXFVLDDGWFGHRDDDTTSLGDWFVDQRKFPD--GIEHFSQAVHQQGXKFGLWFEPEXVSVDS  421 (742)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTTCTT--HHHHHHHHHHHTTCEEEEEECTTEECSSS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEECHHHCCC--CHHHHHHHHHHCCCCCEEEECHHHCCCCC
T ss_conf             8999999999998769719997022236888853224312447658288--27999999997398324875013258873


Q ss_pred             HHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             45775215678767733524888887875655556876644167666423127778771136889999999999999998
Q batch____       111 AWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWA  190 (551)
Q Consensus       111 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~~~~~~~~w~  190 (551)
                      +.+++       ++||....+........                           .+-.||.++|+|++++.+.+.-.+
T Consensus       422 ~ly~~-------HPDw~l~~~~~~~~~~r---------------------------~q~vLDl~~P~v~~~i~~~i~~ll  467 (742)
T c3mi6A_         422 DLYQQ-------HPDWLIHAPKSTPTPGR---------------------------HQFVLDXARPEVVDYLFKLXSQXI  467 (742)
T ss_dssp             SHHHH-------CGGGBCCCTTCCCCCSS---------------------------SCEEBCTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHH-------CCCEEEECCCCCCCCCC---------------------------CEEEEECCCHHHHHHHHHHHHHHH
T ss_conf             78885-------96416863897401357---------------------------528985788899999998788887


Q ss_pred             -HCCCCEEEECCHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCC
Q ss_conf             -4599899874577622211343333442001001353689999999999740598299996138888887662367765
Q batch____       191 -DRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGS  269 (551)
Q Consensus       191 -e~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  269 (551)
                       |.|||.|.+|.-..+..........................++..++..                       +......
T Consensus       468 ~e~gidYiKwD~Nr~~~~~~~~~~~~~~~~~~~~~~~~g~y~~ld~L~~~-----------------------~P~v~iE  524 (742)
T c3mi6A_         468 ESANLDYIKWDXNRYATEXFSSRLTSDQQLELPHRYILGVYQLYARLTQA-----------------------YPNVLFE  524 (742)
T ss_dssp             HHHTCSEEEECCCSCCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHHHH-----------------------CTTCEEE
T ss_pred             HHCCCCEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------CCCEEEE
T ss_conf             75497259960665301014566764322025899999999999999875-----------------------8974999


Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             51012461134544421024543335788999999765510466760234413567664211028520237999999999
Q batch____       270 ELSMTFNFHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAM  349 (551)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~nhd~~~~~~~~~~~~~~~~~~~~~~~~  349 (551)
                      .+.++=..............+.....+...-..+.......++......+.....++.......             +..
T Consensus       525 ~CssGGgR~D~g~l~~~~~~w~SD~tda~~R~~Iq~g~s~~~P~~~~~~hv~~~p~h~t~r~~~-------------l~~  591 (742)
T c3mi6A_         525 SCASGGGRFDLGXXYYAPQAWTSDDTDAAERLLIQFGTSYGYPQAXXGAHVSAVPNDQXGRITS-------------LKT  591 (742)
T ss_dssp             ECSTTTSSCSHHHHHHSSEEECCSCCCHHHHHHHHHHHTTTSCGGGEEEEEECSSCTTTCCCCC-------------HHH
T ss_pred             EECCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCCCC-------------HHE
T ss_conf             2148875447266402761210777455468998708311478556123120077644465431-------------000


Q ss_pred             HHHHCCCCCEEECCHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99982897046657154113788787010075000001456542133301233321014766554446778886667667
Q batch____       350 VLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTA  429 (551)
Q Consensus       350 ~~~~~~G~P~iy~G~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~p~~w~~~~~~~~~~  429 (551)
                      -...+-.-++.+.++-                                                                
T Consensus       592 r~~val~g~~g~~~dl----------------------------------------------------------------  607 (742)
T c3mi6A_         592 RGAVAFFGDLGYELDI----------------------------------------------------------------  607 (742)
T ss_dssp             HHHHHTSSEEEEESCS----------------------------------------------------------------
T ss_pred             EEHHHHCCCCCCCCCC----------------------------------------------------------------
T ss_conf             0012210342120201----------------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHC-HHHCCCCEEEEE-----CCCCCEEEEEEEECCCEEEEEE
Q ss_conf             6756555668011687775107548999999999998738-112178579998-----3899499999971890599999
Q batch____       430 GEPWIGLGDNYQQINVEAALADDSSVFYTYQKLIALRKQE-AILTWGNYQDLL-----PNSPVLWCYRREWKGQTLLVIA  503 (551)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~L~~lR~~~-~~l~~g~~~~~~-----~~~~~v~a~~R~~~~~~~lVv~  503 (551)
                                         ........+.+|+.+++-|+. +.++.|.+..+.     ..+-..+.+...++++.+++++
T Consensus       608 -------------------~~l~~~e~~~l~~~i~~yK~~R~ll~~G~~~rl~~p~~~~~~~~a~~~v~~d~~~~v~~~~  668 (742)
T c3mi6A_         608 -------------------TKXAPTELDQVKKQVAFYKCYRQLFQFGKFYRIDSPFVEDGNVTSWQVVSDDQKQAIAARY  668 (742)
T ss_dssp             -------------------TTCCHHHHHHHHHHHHHHHHTHHHHHHSEEEECSCTTSTTCCEEEEEEECTTSSEEEEEEE
T ss_pred             -------------------CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEE
T ss_conf             -------------------1089989999999999988650777645589840667788772399999778886999999


Q ss_pred             ECCCCC
Q ss_conf             887987
Q batch____       504 NLSREI  509 (551)
Q Consensus       504 N~~~~~  509 (551)
                      +....+
T Consensus       669 ~~~~~~  674 (742)
T c3mi6A_         669 QLLNHP  674 (742)
T ss_dssp             ESSCCS
T ss_pred             ECCCCC
T ss_conf             716788