47 c3amlA_ Probab=100.00  E-value=0  Score=504.32  Aligned_columns=451  Identities=14%

Q ss_pred             HHCEEEEEECCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             708989982443225899988768999974-58799729989999886647799-8874535233336555899999999
Q batch____         9 QNGVIYQIYPKSFQDTTGSGTGDLRGVIQH-LDYLHKLGVDAIWLTPFYVSPQV-DNGYDVANYTAIDPTYGTLDDFDEL   86 (551)
Q Consensus         9 ~~~viY~i~~~~F~d~~~~~~Gd~~gl~~~-Ldylk~LGv~~i~L~Pi~~~~~~-~~GY~~~d~~~id~~~Gt~~dfk~l   86 (551)
                      ++.||||+||++|+.  ....|+|++++++ |||||+||||+||||||++++.. +|||+|++|++|+|+|||++|||+|
T Consensus       173 ~~~~IYE~hv~~~~~--~~~~g~~~~~~~~~l~ylk~LGvt~I~LmPv~e~~~~~~wGY~~~~y~a~~~~yGt~~dlk~L  250 (693)
T c3amlA_         173 DAPRIYEAHVGMSGE--EPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYL  250 (693)
T ss_dssp             SSCEEEEEESTTCSS--SSSCCCHHHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHH
T ss_pred             CCCEEEEEEECCCCC--CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             555389974043478--887688999998653889974998999907616899888476665235507778899999999


Q ss_pred             HHHHHHCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             99999889989999953454786545775215678767733524888887875655556876644167666423127778
Q batch____        87 VTQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAP  166 (551)
Q Consensus        87 V~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (551)
                      |++||++||+||||+|+||++.+++++....+...+...+|+..+...                           ....-
T Consensus       251 Vd~aH~~GI~VIlDvV~NH~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---------------------------~~~~w  303 (693)
T c3amlA_         251 VDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRG---------------------------YHKLW  303 (693)
T ss_dssp             HHHHHHTTCEEEEEECCSCBCCCTTTSGGGGCSSCCGGGSSBCCGGGG---------------------------EETTT
T ss_pred             HHHHHHCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC---------------------------CCCCC
T ss_conf             999999898799998014347875103476407888621233268986---------------------------25788


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCHHHH---HHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf             771136889999999999999998-459989987457762---2211343333442001001353689999999999740
Q batch____       167 EQADLNWENPAVRAELKKVCEFWA-DRGVDGLRLDVVNLI---SKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDVFT  242 (551)
Q Consensus       167 ~~~~ln~~~p~v~~~~~~~~~~w~-e~gvDGfR~D~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (551)
                      +++++|+++|+|+++|+++++||+ ||||||||||++.++   ......................+...|++++++.++.
T Consensus       304 ~~~~~n~~~p~V~~~i~d~~~~Wi~ey~iDGfR~Dav~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~v~~  383 (693)
T c3amlA_         304 DSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLDTDVDAIVYMMLANHLMHK  383 (693)
T ss_dssp             TEECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTHHHHHBTTTTTTCCCCSCGGGTSSTTBCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             86211688999999999999999998089806772133201135556655544555444665665568999999999988


Q ss_pred             -CCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf             -5982999961388888876623677655101246113454442102454333578899999976551046676023441
Q batch____       243 -PRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFW  321 (551)
Q Consensus       243 -~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  321 (551)
                       .|+.+++||.+............++. +....+++......................+.......    ......++|+
T Consensus       384 ~~p~~~~iaE~~~~~~~~~~~~~~gg~-gfd~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~y~  458 (693)
T c3amlA_         384 LLPEATIVAEDVSGMPVLCRPVDEGGV-GFDFRLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLTNR----RYTEKCIAYA  458 (693)
T ss_dssp             HCTTCEEEECCSSCCTTTTSCGGGTSC-CCSEEECTTHHHHHHHHHHHCCGGGCCHHHHHHHHHCS----CTTSCEEECS
T ss_pred             HCCCEEEEECCCCCCHHHHCCCCCCCC-CCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC----CCCHHEEEEC
T ss_conf             679879994004885655100115897-41304080788899998646853013588888776316----7701058841


Q ss_pred             CCCCCCCCCCCCCCC---------------------HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCHHCC
Q ss_conf             356766421102852---------------------02379999999999998289704665715411378878701007
Q batch____       322 CNHDQPRIVSRFGDE---------------------GEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYR  380 (551)
Q Consensus       322 ~nhd~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~G~P~iy~G~E~g~~~~~~~~~~~~~  380 (551)
                      +|||..+........                     ......+..++++++++.+|+|+||||+|+|+.+..+..     
T Consensus       459 esHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~g~Pliy~G~EfG~~~~~d~~-----  533 (693)
T c3amlA_         459 ESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTINRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFP-----  533 (693)
T ss_dssp             CCCCTTSCCCBCHHHHHHTTHHHHSCBSSSCCCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTGGGTCCSBCCCC-----
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC-----
T ss_conf             348864004200024577801000100467777458899999999999999808980399857011576888887-----


Q ss_pred             CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH
Q ss_conf             50000014565421333012333210147665544467788866676676756555668011687775107548999999
Q batch____       381 DVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALADDSSVFYTYQ  460 (551)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~  460 (551)
                                                                     ..+..+............+.+......+++++|
T Consensus       534 -----------------------------------------------~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~~k  566 (693)
T c3amlA_         534 -----------------------------------------------REGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQ  566 (693)
T ss_dssp             -----------------------------------------------CGGGTTCCTTSSCCHHHHHCTTBSHHHHHHHHH
T ss_pred             -----------------------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             -----------------------------------------------767777543354665532110143058999999


Q ss_pred             HHHHHHHHCHHHCCCCEEE-EECCCCCEEEEEEEECCCEEEEEEECCCCCE----EEECCCCCCCEEEEECCCCCCCCC-
Q ss_conf             9999987381121785799-9838994999999718905999998879878----998786777149997278776677-
Q batch____       461 KLIALRKQEAILTWGNYQD-LLPNSPVLWCYRREWKGQTLLVIANLSREIQ----PWQAGQMRGNWQLVMHNYEEASPQ-  534 (551)
Q Consensus       461 ~L~~lR~~~~~l~~g~~~~-~~~~~~~v~a~~R~~~~~~~lVv~N~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~-  534 (551)
                      +|++||+++|+|+.|.... ...++++|+||.|    ..+|||+|+++.++    ++.++.. |.|+++++++.....+ 
T Consensus       567 ~Li~LR~~~p~L~~g~~~~~~~~~~~~Vlaf~R----~~llvV~N~~~~~~~~~~~i~~~~~-G~y~~ilnsd~~~fgG~  641 (693)
T c3amlA_         567 AMNALEEEFSFLSSSKQIVSDMNEKDKVIVFER----GDLVFVFNFHPNKTYKGYKVGCDLP-GKYRVALDSDALVFGGH  641 (693)
T ss_dssp             HHHHHHHHHCGGGCCCEEEEEEETTTTEEEEEE----TTEEEEEECCSSCCEEEEEEEESSC-SEEEEEEETTSGGGTSC
T ss_pred             HHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEE----CCEEEEEECCCCCEEEEEECCCCCC-CEEEEEEECCCCCCCCC
T ss_conf             999998748301078379997518984999998----8989999765884231167126899-63899970784110765


Q ss_pred             -----------------------------CCEEEECCCEEEEEEE
Q ss_conf             -----------------------------6158988971899997
Q batch____       535 -----------------------------PCAMNLRPFEAVWWLQ  550 (551)
Q Consensus       535 -----------------------------~~~~~L~p~~~~~l~~  550 (551)
                                                   +.+++|+|.++|||.+
T Consensus       642 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~vtlP~~s~vVl~~  686 (693)
T c3amlA_         642 GRVGHDVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYR  686 (693)
T ss_dssp             CCSCTTCCEECEECSCTTCGGGSBTTBSEEEEEEECTTEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEE
T ss_conf             656666644445555555553311575521899958835899997