BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (76 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P06965 Repressor protein of division inhibition gene di... 157 1e-37 UniRef50_C8ULK1 Predicted antirepressor protein n=3 Tax=Enteroba... 56 4e-07 UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterob... 52 4e-06 UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria ... 52 4e-06 UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia py... 52 8e-06 UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, p... 45 6e-04 UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Ars... 45 6e-04 UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protei... 45 7e-04 UniRef50_C0B0V7 Putative uncharacterized protein n=1 Tax=Proteus... 44 0.001 UniRef50_D2TX38 Putative cell division control protein n=1 Tax=A... 44 0.002 UniRef50_Q2SEA2 Probable transcriptional regulator, Cro-like n=1... 44 0.002 UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_... 43 0.004 UniRef50_B7LNL8 Putative dicC; repressor protein of division inh... 42 0.006 UniRef50_C8TPK2 Putative antirepressor Cro n=2 Tax=Escherichia c... 42 0.009 >UniRef50_P06965 Repressor protein of division inhibition gene dicB n=45 Tax=Enterobacteriaceae RepID=DICC_ECOLI Length = 76 Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE Sbjct: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 Query: 61 YRKTKRAGRLNNENHS 76 YRKTKRAGRLNNENHS Sbjct: 61 YRKTKRAGRLNNENHS 76 >UniRef50_C8ULK1 Predicted antirepressor protein n=3 Tax=Enterobacteriaceae RepID=C8ULK1_ECO1A Length = 71 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K D L YF K +A+A GI ++ WK ++P+ RAM L E + GEL+Y+P++Y + Sbjct: 1 MFKDDVLRYFKKKRLVAEALGISHVAVVRWKA-VIPKLRAMELDEITNGELKYNPELYKK 59 Query: 61 YRKTKRAGR 69 T G+ Sbjct: 60 QDSTSNEGK 68 >UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A7FIY8_YERP3 Length = 68 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVY 58 M K D + +FG A A GI+ ++ W G+++PE +AMR++ + GEL+YDP +Y Sbjct: 1 MKKKDVVKFFGGVVNTAIALGIKHPAVCRW-GEIIPEKQAMRIERITHGELRYDPAMY 57 >UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria RepID=C6M779_NEISI Length = 61 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLK D L +FGSK+ AQ + +++ WK D++PE +A R+++ + G+L+ +P +Y++ Sbjct: 1 MLKADVLKFFGSKSATAQHLDVSPSAVTQWK-DIIPEKQAYRIEKITNGKLKVNPSLYNK 59 >UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia pyrifoliae RepID=D0FSA9_ERWPY Length = 67 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVY 58 M K DA+ +FGSK+KLA AA + S+ W G ++P+ RAM L + G LQY+ +Y Sbjct: 1 MYKEDAIKFFGSKSKLAAAANVTRPSVTRW-GRIIPKLRAMELAAITNGALQYEADLY 57 >UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, prophage-related n=9 Tax=Gammaproteobacteria RepID=Q2SPC5_HAHCH Length = 64 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ YFG K+KLA A G+ AS+ S +G+ +P RA +++ +GG+L+ +V + Sbjct: 1 MRKADAVAYFGGKSKLANALGVAPASV-SQRGEFLPMLRAYQVERMTGGKLRVRKRVVAQ 59 >UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Arsenophonus nasoniae RepID=D2TVN9_9ENTR Length = 71 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLK + YF SK +A+ GI ++ W+ D++PE A+ +++ + G L+Y P++Y + Sbjct: 1 MLKAIVVSYFRSKRNVAKVLGISPQAVGQWR-DVIPEKSALLIEKITNGSLKYSPELYRK 59 Query: 61 Y 61 + Sbjct: 60 H 60 >UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB6_AERS4 Length = 62 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYD 54 M K DA+ YFGS +LA+ I ++ W GD++P+GRA +++ +GG+L+ D Sbjct: 1 MKKEDAISYFGSAAELARNLNISEPAVSRW-GDIIPKGRAYQIEVLTGGKLKAD 53 >UniRef50_C0B0V7 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B0V7_9ENTR Length = 68 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M + +YFG +K+A I + Y WK G L+P+ RA+ + G+L+Y+P++ Sbjct: 1 MTTNEVEVYFGDASKVASFFKITPEAFYQWKKRPGQLIPKNRAIEADLLTEGKLKYNPEL 60 Query: 58 YDEYRKT 64 Y + KT Sbjct: 61 YRKNTKT 67 >UniRef50_D2TX38 Putative cell division control protein n=1 Tax=Arsenophonus nasoniae RepID=D2TX38_9ENTR Length = 71 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Query: 9 YFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKVY 58 YFG ++A GI L ++Y W+ G ++P+ RA+ + + G L++DP Y Sbjct: 9 YFGKNRQIADFYGITLEAIYMWRKRSGQIIPKSRALEAEYRTNGALKFDPSFY 61 >UniRef50_Q2SEA2 Probable transcriptional regulator, Cro-like n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEA2_HAHCH Length = 92 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPK 56 M K + L YFGS +A+ GI ++Y W GD VPE R +LQ + G L+ K Sbjct: 1 MTKAEVLAYFGSVANVAKTLGITTQAVYEW-GDSVPEPRQWQLQVLTDGVLKVSSK 55 >UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_BPP22 Length = 61 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVY 58 M K D + +FG++ +A+A GI A++ WK +++PE A RL+ + G L+Y Y Sbjct: 1 MYKKDVIDHFGTQRAVAKALGISDAAVSQWK-EVIPEKDAYRLEIVTAGALKYQENAY 57 >UniRef50_B7LNL8 Putative dicC; repressor protein of division inhibition gene n=4 Tax=Enterobacteriaceae RepID=B7LNL8_ESCF3 Length = 66 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M D YFGS K+A GI ++Y W+ G L+P+GRA + G L + P++ Sbjct: 1 MTTDDIESYFGSIEKVAAFFGITTEAVYQWRNRPGRLIPKGRAAEAAYRTCGRLLFKPEL 60 Query: 58 YDE 60 Y++ Sbjct: 61 YEK 63 >UniRef50_C8TPK2 Putative antirepressor Cro n=2 Tax=Escherichia coli RepID=C8TPK2_ECO26 Length = 75 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 2 LKTDALL-YFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 ++ D L+ +FGS ++A GI ++Y W+ G++VP+GRA S G+L +P++ Sbjct: 1 MRVDELVQFFGSVQRVADFYGITREAIYMWRKRPGEIVPKGRAAEAAAYSKGKLSLNPEL 60 Query: 58 YDEYRKTKRAGR 69 Y + T+ G+ Sbjct: 61 YKKKDTTQGEGK 72 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P06965 Repressor protein of division inhibition gene di... 112 5e-24 UniRef50_C8ULK1 Predicted antirepressor protein n=3 Tax=Enteroba... 95 8e-19 UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterob... 89 3e-17 UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Ars... 84 1e-15 UniRef50_C0B0V7 Putative uncharacterized protein n=1 Tax=Proteus... 84 2e-15 UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria ... 83 2e-15 UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia py... 78 9e-14 UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protei... 73 2e-12 UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, p... 73 3e-12 UniRef50_D2TX38 Putative cell division control protein n=1 Tax=A... 73 3e-12 Sequences not found previously or not previously below threshold: UniRef50_C8TPK2 Putative antirepressor Cro n=2 Tax=Escherichia c... 72 6e-12 UniRef50_B7LNL8 Putative dicC; repressor protein of division inh... 71 2e-11 UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_... 66 5e-10 UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigi... 65 6e-10 UniRef50_B1WN54 Transcriptional regulator, Cro/CI family-related... 65 8e-10 UniRef50_Q2SEA2 Probable transcriptional regulator, Cro-like n=1... 59 4e-08 UniRef50_B7ML20 Putative uncharacterized protein n=13 Tax=Escher... 56 5e-07 UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax... 53 2e-06 UniRef50_A6XRN5 Conserved domain protein n=1 Tax=Vibrio cholerae... 50 3e-05 UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_A... 47 3e-04 UniRef50_D2U1D7 Conserved hypothetical phage protein n=1 Tax=Ars... 46 3e-04 UniRef50_Q37964 Gp39 n=2 Tax=Siphoviridae RepID=Q37964_BPN15 44 0.002 UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro f... 43 0.002 UniRef50_B0VN26 Putative uncharacterized protein n=2 Tax=Acineto... 43 0.003 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 42 0.007 UniRef50_D2U0V1 Conserved hypothetical phage protein (Fragment) ... 41 0.009 UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella... 41 0.011 UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudom... 41 0.011 UniRef50_Q7Y3X4 Cro repressor n=1 Tax=Yersinia phage PY54 RepID=... 39 0.038 >UniRef50_P06965 Repressor protein of division inhibition gene dicB n=45 Tax=Enterobacteriaceae RepID=DICC_ECOLI Length = 76 Score = 112 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE Sbjct: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 Query: 61 YRKTKRAGRLNNENHS 76 YRKTKRAGRLNNENHS Sbjct: 61 YRKTKRAGRLNNENHS 76 >UniRef50_C8ULK1 Predicted antirepressor protein n=3 Tax=Enterobacteriaceae RepID=C8ULK1_ECO1A Length = 71 Score = 94.8 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K D L YF K +A+A GI ++ WK ++P+ RAM L E + GEL+Y+P++Y + Sbjct: 1 MFKDDVLRYFKKKRLVAEALGISHVAVVRWKA-VIPKLRAMELDEITNGELKYNPELYKK 59 Query: 61 YRKTKRAGR 69 T G+ Sbjct: 60 QDSTSNEGK 68 >UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A7FIY8_YERP3 Length = 68 Score = 89.4 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYD 59 M K D + +FG A A GI+ ++ W G+++PE +AMR++ + GEL+YDP +Y Sbjct: 1 MKKKDVVKFFGGVVNTAIALGIKHPAVCRW-GEIIPEKQAMRIERITHGELRYDPAMYQ 58 >UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Arsenophonus nasoniae RepID=D2TVN9_9ENTR Length = 71 Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLK + YF SK +A+ GI ++ W+ D++PE A+ +++ + G L+Y P++Y + Sbjct: 1 MLKAIVVSYFRSKRNVAKVLGISPQAVGQWR-DVIPEKSALLIEKITNGSLKYSPELYRK 59 Query: 61 Y 61 + Sbjct: 60 H 60 >UniRef50_C0B0V7 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B0V7_9ENTR Length = 68 Score = 83.7 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M + +YFG +K+A I + Y WK G L+P+ RA+ + G+L+Y+P++ Sbjct: 1 MTTNEVEVYFGDASKVASFFKITPEAFYQWKKRPGQLIPKNRAIEADLLTEGKLKYNPEL 60 Query: 58 YDEYRKTK 65 Y + KT Sbjct: 61 YRKNTKTA 68 >UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria RepID=C6M779_NEISI Length = 61 Score = 83.3 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLK D L +FGSK+ AQ + +++ WK D++PE +A R+++ + G+L+ +P +Y++ Sbjct: 1 MLKADVLKFFGSKSATAQHLDVSPSAVTQWK-DIIPEKQAYRIEKITNGKLKVNPSLYNK 59 Query: 61 YR 62 + Sbjct: 60 RK 61 >UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia pyrifoliae RepID=D0FSA9_ERWPY Length = 67 Score = 77.9 bits (190), Expect = 9e-14, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ +FGSK+KLA AA + S+ W G ++P+ RAM L + G LQY+ +Y Sbjct: 1 MYKEDAIKFFGSKSKLAAAANVTRPSVTRW-GRIIPKLRAMELAAITNGALQYEADLYAA 59 Query: 61 Y 61 Sbjct: 60 Q 60 >UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB6_AERS4 Length = 62 Score = 73.3 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ YFGS +LA+ I ++ W GD++P+GRA +++ +GG+L+ D + Sbjct: 1 MKKEDAISYFGSAAELARNLNISEPAVSRW-GDIIPKGRAYQIEVLTGGKLKADQSQAAQ 59 Query: 61 YR 62 R Sbjct: 60 GR 61 >UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, prophage-related n=9 Tax=Gammaproteobacteria RepID=Q2SPC5_HAHCH Length = 64 Score = 72.9 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ YFG K+KLA A G+ AS+ +G+ +P RA +++ +GG+L+ +V + Sbjct: 1 MRKADAVAYFGGKSKLANALGVAPASVSQ-RGEFLPMLRAYQVERMTGGKLRVRKRVVAQ 59 >UniRef50_D2TX38 Putative cell division control protein n=1 Tax=Arsenophonus nasoniae RepID=D2TX38_9ENTR Length = 71 Score = 72.9 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M YFG ++A GI L ++Y W+ G ++P+ RA+ + + G L++DP Sbjct: 1 MTVNQLKSYFGKNRQIADFYGITLEAIYMWRKRSGQIIPKSRALEAEYRTNGALKFDPSF 60 Query: 58 YDEYRK 63 Y + Sbjct: 61 YAKKNN 66 >UniRef50_C8TPK2 Putative antirepressor Cro n=2 Tax=Escherichia coli RepID=C8TPK2_ECO26 Length = 75 Score = 71.7 bits (174), Expect = 6e-12, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 3/72 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M + + +FGS ++A GI ++Y W+ G++VP+GRA S G+L +P++ Sbjct: 1 MRVDELVQFFGSVQRVADFYGITREAIYMWRKRPGEIVPKGRAAEAAAYSKGKLSLNPEL 60 Query: 58 YDEYRKTKRAGR 69 Y + T+ G+ Sbjct: 61 YKKKDTTQGEGK 72 >UniRef50_B7LNL8 Putative dicC; repressor protein of division inhibition gene n=4 Tax=Enterobacteriaceae RepID=B7LNL8_ESCF3 Length = 66 Score = 70.6 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M D YFGS K+A GI ++Y W+ G L+P+GRA + G L + P++ Sbjct: 1 MTTDDIESYFGSIEKVAAFFGITTEAVYQWRNRPGRLIPKGRAAEAAYRTCGRLLFKPEL 60 Query: 58 YDE 60 Y++ Sbjct: 61 YEK 63 >UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_BPP22 Length = 61 Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K D + +FG++ +A+A GI A++ WK +++PE A RL+ + G L+Y Y + Sbjct: 1 MYKKDVIDHFGTQRAVAKALGISDAAVSQWK-EVIPEKDAYRLEIVTAGALKYQENAYRQ 59 >UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q083R5_SHEFN Length = 61 Score = 65.2 bits (157), Expect = 6e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQY-DPKV 57 M D + +FG + +LA+ + ++ W GD VP RA ++Q + G+L+ +P++ Sbjct: 1 MKTADVIAHFGGQGRLAKVLDVSQPAISKW-GDTVPLLRAYQIQVITNGKLKVGNPQI 57 >UniRef50_B1WN54 Transcriptional regulator, Cro/CI family-related protein n=1 Tax=Vibrio fischeri ES114 RepID=B1WN54_VIBF1 Length = 61 Score = 64.8 bits (156), Expect = 8e-10, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYD 54 M K + +FG K+A A I +++ W G+ VP+ RA ++ + G L+ D Sbjct: 1 MKKEAVIKHFGGVVKVASALKIDHSAVSQW-GENVPQLRAFEIERITNGALKAD 53 >UniRef50_Q2SEA2 Probable transcriptional regulator, Cro-like n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEA2_HAHCH Length = 92 Score = 59.4 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K + L YFGS +A+ GI ++Y W GD VPE R +LQ + G L+ K + Sbjct: 1 MTKAEVLAYFGSVANVAKTLGITTQAVYEW-GDSVPEPRQWQLQVLTDGVLKVSSKRSRQ 59 Query: 61 YRKTKRAGRLN 71 + + + + N Sbjct: 60 GKSSTQILKKN 70 >UniRef50_B7ML20 Putative uncharacterized protein n=13 Tax=Escherichia RepID=B7ML20_ECO45 Length = 96 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYD---PKV 57 M K++ L YFG K A A G ++ W G+ VP A+ +Q + G L+Y+ P V Sbjct: 17 MKKSEVLGYFGGVVKTAAALGTSKTTVSMW-GEEVPWKWALLIQAVTAGALKYELHIPTV 75 Query: 58 Y---DEYRKTKRAGRLNNENHS 76 ++ G + +EN + Sbjct: 76 VIPGSDHNPPSNQGGI-HENQA 96 >UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax=Gammaproteobacteria RepID=Q88MM1_PSEPK Length = 58 Score = 53.2 bits (126), Expect = 2e-06, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPK 56 M K+ A+ +FGS + LA+A G+ ++ W VPE R +++ + G L+ + Sbjct: 1 MTKSQAIQHFGSISALAKALGVTYEAVRQWAD--VPELRQYQIERLTKGALKAGKR 54 >UniRef50_A6XRN5 Conserved domain protein n=1 Tax=Vibrio cholerae AM-19226 RepID=A6XRN5_VIBCH Length = 64 Score = 49.8 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEA 46 + D + +FG+K K+A A G +++ W G+ VPE R Sbjct: 8 IKTVDVITFFGTKQKVANAVGTTHSAVSQW-GEFVPESRVFEFHYL 52 >UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_ACIBT Length = 82 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDP-------K 56 +A+ + GS + LA+ G+ + W + +PE R ++++E + G+++ + + Sbjct: 9 NNAVTFAGSISALARKIGVTPWAASKWNPEKIPEDRCLKIEEITQGQVKAEQLRPDINWE 68 Query: 57 VYDEYRKTKRA 67 + K + Sbjct: 69 YVRKNLKKQNQ 79 >UniRef50_D2U1D7 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U1D7_9ENTR Length = 65 Score = 45.9 bits (107), Expect = 3e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 7 LLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTKR 66 + YFG A+ I +++ W G+++P A+ +++ + L + +Y KT R Sbjct: 2 IDYFGGTVATAKVLNISKSTVSLW-GEVIPWKYALLIEKLTKKNLMLEADLY--QNKTIR 58 Query: 67 AGRLNN 72 + N+ Sbjct: 59 TLKNNS 64 >UniRef50_Q37964 Gp39 n=2 Tax=Siphoviridae RepID=Q37964_BPN15 Length = 71 Score = 44.0 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSW-KGDLVPEGRAMRLQEASGGELQYDPKVYD 59 M + + +FG K A G+ ++Y W + +P R ++ + +L+ D Sbjct: 1 MKPEELVRHFGDVEKAAVGVGVTPGAVYQWLQAGEIPPLRQSDIEVRTAYKLKSDFTSQR 60 Query: 60 EYRKTKRAG 68 ++ +G Sbjct: 61 MGKEGHNSG 69 >UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H4_ACIF2 Length = 69 Score = 43.2 bits (100), Expect = 0.002, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGEL---QYDPKV 57 M + G T +A+ GI ++ WK +P +A+ ++ A+ G + + P + Sbjct: 1 MDTKLIIKSLGGPTAVARLIGITKGAVSQWKA--IPVDKAILIERATHGSITRQELRPDI 58 Query: 58 YDEYRK 63 + + Sbjct: 59 FLPHVS 64 >UniRef50_B0VN26 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=B0VN26_ACIBS Length = 61 Score = 42.8 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 1 MLKTDALLYFGSK-TKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGE 50 M K +A G LA+ GI ++Y W + +P R ++++ + G+ Sbjct: 1 MTKQEAYKLLGVNGVGLAKLLGIEPPAVYQWPNEKIPLAREYQIRDLASGK 51 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 41.7 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 6 ALLYFGSKTKLAQAAGIRLASLYSW--KGDLVPEGRAMRLQEASGGELQ 52 A Y G ++++A+ GI ++ W +P R +++ + G ++ Sbjct: 13 ACNYVGGQSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVR 61 >UniRef50_D2U0V1 Conserved hypothetical phage protein (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U0V1_9ENTR Length = 42 Score = 41.3 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 11 GSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGE 50 G+KT LA+ I +++ W GD +PE RA++L++ + Sbjct: 3 GNKTNLAKLLKITKSAVSQW-GDDIPELRALQLEKLVNDK 41 >UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R0L1_XYLFA Length = 79 Score = 41.3 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGD-LVPEGRAMRLQEASGGEL---QYDPKVY 58 A+ GS + LA + G+R +++ +W+ VP R + ++ + G + + P V+ Sbjct: 5 DIAINKLGSVSALAASLGVRQSAISNWRARGRVPAERCIDIERVTNGAVICRELRPDVF 63 >UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5W3_PSEP1 Length = 82 Score = 41.3 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKG--DLVPEGRAMRLQEASGGEL 51 +A GS+ +LA+ + ++ W VP RA++++ + G + Sbjct: 8 KEASRVLGSQAELARRLNVAAPTVNQWCSGERTVPAKRALQIEALTNGAV 57 >UniRef50_Q7Y3X4 Cro repressor n=1 Tax=Yersinia phage PY54 RepID=Q7Y3X4_9CAUD Length = 67 Score = 39.4 bits (90), Expect = 0.038, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 1/67 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M +A+ G L + ++Y W + VP R L+ G L+ D + + Sbjct: 1 MKTKEAIKIAGGINTLCKLLHCSRDAIYKWGAE-VPAHRQYELEVKMRGRLKSDYTLQRQ 59 Query: 61 YRKTKRA 67 + + Sbjct: 60 NARRRND 66 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P06965 Repressor protein of division inhibition gene di... 96 3e-19 UniRef50_C8ULK1 Predicted antirepressor protein n=3 Tax=Enteroba... 91 1e-17 UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterob... 85 9e-16 UniRef50_B7ML20 Putative uncharacterized protein n=13 Tax=Escher... 82 5e-15 UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Ars... 82 7e-15 UniRef50_C0B0V7 Putative uncharacterized protein n=1 Tax=Proteus... 81 9e-15 UniRef50_C8TPK2 Putative antirepressor Cro n=2 Tax=Escherichia c... 81 9e-15 UniRef50_B7LNL8 Putative dicC; repressor protein of division inh... 81 1e-14 UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria ... 79 3e-14 UniRef50_D2TX38 Putative cell division control protein n=1 Tax=A... 78 1e-13 UniRef50_Q2SEA2 Probable transcriptional regulator, Cro-like n=1... 76 4e-13 UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protei... 76 5e-13 UniRef50_Q37964 Gp39 n=2 Tax=Siphoviridae RepID=Q37964_BPN15 75 8e-13 UniRef50_B1WN54 Transcriptional regulator, Cro/CI family-related... 74 1e-12 UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia py... 74 1e-12 UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_... 74 2e-12 UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, p... 73 3e-12 UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigi... 71 2e-11 UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_A... 68 7e-11 UniRef50_D2U1D7 Conserved hypothetical phage protein n=1 Tax=Ars... 66 3e-10 UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax... 66 4e-10 UniRef50_A6XRN5 Conserved domain protein n=1 Tax=Vibrio cholerae... 62 5e-09 Sequences not found previously or not previously below threshold: UniRef50_Q7Y3X4 Cro repressor n=1 Tax=Yersinia phage PY54 RepID=... 49 7e-05 UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro f... 48 7e-05 UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisser... 48 1e-04 UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella... 47 2e-04 UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH... 45 6e-04 UniRef50_B0VN26 Putative uncharacterized protein n=2 Tax=Acineto... 45 0.001 UniRef50_D2U0V1 Conserved hypothetical phage protein (Fragment) ... 44 0.002 UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteob... 43 0.004 UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudom... 42 0.006 UniRef50_Q6J1N2 Gp45 n=1 Tax=Burkholderia phage BcepC6B RepID=Q6... 42 0.007 UniRef50_B0VSZ4 Putative bacteriophage regulatory protein n=1 Ta... 41 0.009 UniRef50_B0VTJ1 Putative uncharacterized protein n=4 Tax=Acineto... 41 0.009 UniRef50_B0VKG4 Putative uncharacterized protein n=3 Tax=Acineto... 41 0.010 UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=... 41 0.011 UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli ... 40 0.023 UniRef50_A6WVE7 Putative uncharacterized protein n=1 Tax=Ochroba... 40 0.030 UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickett... 40 0.032 UniRef50_C6RPZ4 Putative uncharacterized protein n=1 Tax=Acineto... 39 0.047 UniRef50_Q3RF79 Putative uncharacterized protein n=1 Tax=Xylella... 38 0.078 UniRef50_A5WF42 Putative uncharacterized protein n=1 Tax=Psychro... 38 0.088 >UniRef50_P06965 Repressor protein of division inhibition gene dicB n=45 Tax=Enterobacteriaceae RepID=DICC_ECOLI Length = 76 Score = 95.9 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE Sbjct: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 Query: 61 YRKTKRAGRLNNENHS 76 YRKTKRAGRLNNENHS Sbjct: 61 YRKTKRAGRLNNENHS 76 >UniRef50_C8ULK1 Predicted antirepressor protein n=3 Tax=Enterobacteriaceae RepID=C8ULK1_ECO1A Length = 71 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K D L YF K +A+A GI ++ WK ++P+ RAM L E + GEL+Y+P++Y + Sbjct: 1 MFKDDVLRYFKKKRLVAEALGISHVAVVRWKA-VIPKLRAMELDEITNGELKYNPELYKK 59 Query: 61 YRKTKRAGRLNN 72 T G+ ++ Sbjct: 60 QDSTSNEGKNDS 71 >UniRef50_A7FIY8 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A7FIY8_YERP3 Length = 68 Score = 84.8 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K D + +FG A A GI+ ++ W G+++PE +AMR++ + GEL+YDP +Y Sbjct: 1 MKKKDVVKFFGGVVNTAIALGIKHPAVCRW-GEIIPEKQAMRIERITHGELRYDPAMYQS 59 Query: 61 YRKTKRA 67 Sbjct: 60 SLIKINT 66 >UniRef50_B7ML20 Putative uncharacterized protein n=13 Tax=Escherichia RepID=B7ML20_ECO45 Length = 96 Score = 82.1 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYD---PKV 57 M K++ L YFG K A A G ++ W G+ VP A+ +Q + G L+Y+ P V Sbjct: 17 MKKSEVLGYFGGVVKTAAALGTSKTTVSMW-GEEVPWKWALLIQAVTAGALKYELHIPTV 75 Query: 58 Y---DEYRKTKRAGRLNNENHS 76 ++ G + +EN + Sbjct: 76 VIPGSDHNPPSNQGGI-HENQA 96 >UniRef50_D2TVN9 Conserved hypothetical phage protein n=3 Tax=Arsenophonus nasoniae RepID=D2TVN9_9ENTR Length = 71 Score = 81.7 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLK + YF SK +A+ GI ++ W+ D++PE A+ +++ + G L+Y P++Y + Sbjct: 1 MLKAIVVSYFRSKRNVAKVLGISPQAVGQWR-DVIPEKSALLIEKITNGSLKYSPELYRK 59 Query: 61 YRKTKRAGRLNNE 73 + T+ + N + Sbjct: 60 HH-TENSQHNNTD 71 >UniRef50_C0B0V7 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B0V7_9ENTR Length = 68 Score = 81.3 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M + +YFG +K+A I + Y WK G L+P+ RA+ + G+L+Y+P++ Sbjct: 1 MTTNEVEVYFGDASKVASFFKITPEAFYQWKKRPGQLIPKNRAIEADLLTEGKLKYNPEL 60 Query: 58 YDEYRKTK 65 Y + KT Sbjct: 61 YRKNTKTA 68 >UniRef50_C8TPK2 Putative antirepressor Cro n=2 Tax=Escherichia coli RepID=C8TPK2_ECO26 Length = 75 Score = 81.3 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M + + +FGS ++A GI ++Y W+ G++VP+GRA S G+L +P++ Sbjct: 1 MRVDELVQFFGSVQRVADFYGITREAIYMWRKRPGEIVPKGRAAEAAAYSKGKLSLNPEL 60 Query: 58 YDEYRKTKRAGRLNN 72 Y + T+ G+ ++ Sbjct: 61 YKKKDTTQGEGKGDS 75 >UniRef50_B7LNL8 Putative dicC; repressor protein of division inhibition gene n=4 Tax=Enterobacteriaceae RepID=B7LNL8_ESCF3 Length = 66 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M D YFGS K+A GI ++Y W+ G L+P+GRA + G L + P++ Sbjct: 1 MTTDDIESYFGSIEKVAAFFGITTEAVYQWRNRPGRLIPKGRAAEAAYRTCGRLLFKPEL 60 Query: 58 YDEYR 62 Y++ Sbjct: 61 YEKSN 65 >UniRef50_C6M779 Conserved domain protein n=3 Tax=Proteobacteria RepID=C6M779_NEISI Length = 61 Score = 79.4 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 MLK D L +FGSK+ AQ + +++ WK D++PE +A R+++ + G+L+ +P +Y++ Sbjct: 1 MLKADVLKFFGSKSATAQHLDVSPSAVTQWK-DIIPEKQAYRIEKITNGKLKVNPSLYNK 59 Query: 61 YR 62 + Sbjct: 60 RK 61 >UniRef50_D2TX38 Putative cell division control protein n=1 Tax=Arsenophonus nasoniae RepID=D2TX38_9ENTR Length = 71 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWK---GDLVPEGRAMRLQEASGGELQYDPKV 57 M YFG ++A GI L ++Y W+ G ++P+ RA+ + + G L++DP Sbjct: 1 MTVNQLKSYFGKNRQIADFYGITLEAIYMWRKRSGQIIPKSRALEAEYRTNGALKFDPSF 60 Query: 58 YDEYRK 63 Y + Sbjct: 61 YAKKNN 66 >UniRef50_Q2SEA2 Probable transcriptional regulator, Cro-like n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEA2_HAHCH Length = 92 Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K + L YFGS +A+ GI ++Y W GD VPE R +LQ + G L+ K + Sbjct: 1 MTKAEVLAYFGSVANVAKTLGITTQAVYEW-GDSVPEPRQWQLQVLTDGVLKVSSKRSRQ 59 Query: 61 YRKTKRAGRLN 71 + + + + N Sbjct: 60 GKSSTQILKKN 70 >UniRef50_A4SLB6 Phage transcriptional regulator, Cro-like protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB6_AERS4 Length = 62 Score = 75.5 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ YFGS +LA+ I ++ W GD++P+GRA +++ +GG+L+ D + Sbjct: 1 MKKEDAISYFGSAAELARNLNISEPAVSRW-GDIIPKGRAYQIEVLTGGKLKADQSQAAQ 59 Query: 61 YR 62 R Sbjct: 60 GR 61 >UniRef50_Q37964 Gp39 n=2 Tax=Siphoviridae RepID=Q37964_BPN15 Length = 71 Score = 74.7 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSW-KGDLVPEGRAMRLQEASGGELQYDPKVYD 59 M + + +FG K A G+ ++Y W + +P R ++ + +L+ D Sbjct: 1 MKPEELVRHFGDVEKAAVGVGVTPGAVYQWLQAGEIPPLRQSDIEVRTAYKLKSDFTSQR 60 Query: 60 EYRKTKRAGRL 70 ++ +G Sbjct: 61 MGKEGHNSGTK 71 >UniRef50_B1WN54 Transcriptional regulator, Cro/CI family-related protein n=1 Tax=Vibrio fischeri ES114 RepID=B1WN54_VIBF1 Length = 61 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPK 56 M K + +FG K+A A I +++ W G+ VP+ RA ++ + G L+ D Sbjct: 1 MKKEAVIKHFGGVVKVASALKIDHSAVSQW-GENVPQLRAFEIERITNGALKADFT 55 >UniRef50_D0FSA9 Lambda repressor-like protein n=2 Tax=Erwinia pyrifoliae RepID=D0FSA9_ERWPY Length = 67 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ +FGSK+KLA AA + S+ W G ++P+ RAM L + G LQY+ +Y Sbjct: 1 MYKEDAIKFFGSKSKLAAAANVTRPSVTRW-GRIIPKLRAMELAAITNGALQYEADLYAA 59 Query: 61 YRKT 64 Sbjct: 60 QYNG 63 >UniRef50_P09964 Regulatory protein cro n=16 Tax=root RepID=RCRO_BPP22 Length = 61 Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K D + +FG++ +A+A GI A++ WK +++PE A RL+ + G L+Y Y + Sbjct: 1 MYKKDVIDHFGTQRAVAKALGISDAAVSQWK-EVIPEKDAYRLEIVTAGALKYQENAYRQ 59 >UniRef50_Q2SPC5 Uncharacterized protein conserved in bacteria, prophage-related n=9 Tax=Gammaproteobacteria RepID=Q2SPC5_HAHCH Length = 64 Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M K DA+ YFG K+KLA A G+ AS+ +G+ +P RA +++ +GG+L+ +V + Sbjct: 1 MRKADAVAYFGGKSKLANALGVAPASVSQ-RGEFLPMLRAYQVERMTGGKLRVRKRVVAQ 59 >UniRef50_Q083R5 Uncharacterized protein n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q083R5_SHEFN Length = 61 Score = 70.5 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQY 53 M D + +FG + +LA+ + ++ W GD VP RA ++Q + G+L+ Sbjct: 1 MKTADVIAHFGGQGRLAKVLDVSQPAISKW-GDTVPLLRAYQIQVITNGKLKV 52 >UniRef50_A3M3T1 Putative Cro protein n=8 Tax=root RepID=A3M3T1_ACIBT Length = 82 Score = 68.2 bits (165), Expect = 7e-11, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDP-------K 56 +A+ + GS + LA+ G+ + W + +PE R ++++E + G+++ + + Sbjct: 9 NNAVTFAGSISALARKIGVTPWAASKWNPEKIPEDRCLKIEEITQGQVKAEQLRPDINWE 68 Query: 57 VYDEYRKTKRA 67 + K + Sbjct: 69 YVRKNLKKQNQ 79 >UniRef50_D2U1D7 Conserved hypothetical phage protein n=1 Tax=Arsenophonus nasoniae RepID=D2U1D7_9ENTR Length = 65 Score = 66.3 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 6 ALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTK 65 + YFG A+ I +++ W G+++P A+ +++ + L + +Y KT Sbjct: 1 MIDYFGGTVATAKVLNISKSTVSLW-GEVIPWKYALLIEKLTKKNLMLEADLY--QNKTI 57 Query: 66 RAGRLNN 72 R + N+ Sbjct: 58 RTLKNNS 64 >UniRef50_Q88MM1 Transcriptional regulator, Cro/CI family n=4 Tax=Gammaproteobacteria RepID=Q88MM1_PSEPK Length = 58 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPK 56 M K+ A+ +FGS + LA+A G+ ++ W VPE R +++ + G L+ + Sbjct: 1 MTKSQAIQHFGSISALAKALGVTYEAVRQWAD--VPELRQYQIERLTKGALKAGKR 54 >UniRef50_A6XRN5 Conserved domain protein n=1 Tax=Vibrio cholerae AM-19226 RepID=A6XRN5_VIBCH Length = 64 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEA 46 + D + +FG+K K+A A G +++ W G+ VPE R Sbjct: 8 IKTVDVITFFGTKQKVANAVGTTHSAVSQW-GEFVPESRVFEFHYL 52 >UniRef50_Q7Y3X4 Cro repressor n=1 Tax=Yersinia phage PY54 RepID=Q7Y3X4_9CAUD Length = 67 Score = 48.6 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE 60 M +A+ G L + ++Y W G VP R L+ G L+ D + + Sbjct: 1 MKTKEAIKIAGGINTLCKLLHCSRDAIYKW-GAEVPAHRQYELEVKMRGRLKSDYTLQRQ 59 Query: 61 YRKTKR 66 + + Sbjct: 60 NARRRN 65 >UniRef50_B7J7H4 Prophage Afe01, transcriptional regulator, Cro family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7H4_ACIF2 Length = 69 Score = 48.2 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGEL 51 M + G T +A+ GI ++ WK +P +A+ ++ A+ G + Sbjct: 1 MDTKLIIKSLGGPTAVARLIGITKGAVSQWKA--IPVDKAILIERATHGSI 49 >UniRef50_C1HWP2 Putative uncharacterized protein n=9 Tax=Neisseria gonorrhoeae RepID=C1HWP2_NEIGO Length = 78 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSW--KGDLVPEGRAMRLQEASGGEL 51 M A+ YFG++++LA+A G++ ++++W KG P R +++++ +GG + Sbjct: 3 MSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAV 55 >UniRef50_Q3R0L1 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R0L1_XYLFA Length = 79 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGD-LVPEGRAMRLQEASGGEL 51 A+ GS + LA + G+R +++ +W+ VP R + ++ + G + Sbjct: 5 DIAINKLGSVSALAASLGVRQSAISNWRARGRVPAERCIDIERVTNGAV 53 >UniRef50_B4EVH8 Phage protein n=3 Tax=Proteobacteria RepID=B4EVH8_PROMH Length = 79 Score = 45.5 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 9 YFGSKTKLAQAAGIRLASLYSW--KGDLVPEGRAMRLQEASGGELQYDP 55 Y G ++++A+ GI ++ W +P R +++ + G ++ + Sbjct: 16 YVGGQSEMAKRLGISPPTVNQWINGTRKIPARRCPEIEKVTSGVVRCEE 64 >UniRef50_B0VN26 Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=B0VN26_ACIBS Length = 61 Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 1 MLKTDALLYFG-SKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGE 50 M K +A G + LA+ GI ++Y W + +P R ++++ + G+ Sbjct: 1 MTKQEAYKLLGVNGVGLAKLLGIEPPAVYQWPNEKIPLAREYQIRDLASGK 51 >UniRef50_D2U0V1 Conserved hypothetical phage protein (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U0V1_9ENTR Length = 42 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 11 GSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGE 50 G+KT LA+ I +++ W GD +PE RA++L++ + Sbjct: 3 GNKTNLAKLLKITKSAVSQW-GDDIPELRALQLEKLVNDK 41 >UniRef50_Q1QIT7 Cytoplasmic chaperone TorD n=10 Tax=Alphaproteobacteria RepID=Q1QIT7_NITHX Length = 260 Score = 42.8 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASG-GELQYDPKVYDE 60 A+ G + +LA+ GI S+ +W VP R + ++ +G L+ P +Y E Sbjct: 7 DRAIQVAGGQAELARRIGISQPSVSNWN--RVPAERVIAVEAVTGISRLELRPDLYSE 62 >UniRef50_A5W5W3 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5W3_PSEP1 Length = 82 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKG--DLVPEGRAMRLQEASGGEL 51 +A GS+ +LA+ + ++ W VP RA++++ + G + Sbjct: 8 KEASRVLGSQAELARRLNVAAPTVNQWCSGERTVPAKRALQIEALTNGAV 57 >UniRef50_Q6J1N2 Gp45 n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N2_9CAUD Length = 72 Score = 41.6 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGD-LVPEGRAMRLQEASGGEL---QYDPKVY 58 DA+ G T +A A GI S+Y W VPE R + L + + Q P +Y Sbjct: 5 KDAVTEAGGATVVATAFGISRISIYEWIDKGRVPEKRVLPLARLTNWKFTPHQLAPALY 63 >UniRef50_B0VSZ4 Putative bacteriophage regulatory protein n=1 Tax=Acinetobacter baumannii SDF RepID=B0VSZ4_ACIBS Length = 67 Score = 41.2 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRA 40 + DA+ + LA++ G+ A++ W G+ VPE A Sbjct: 9 IKTEDAIDAYNGAANLARSLGVSRAAISQW-GEYVPEVSA 47 >UniRef50_B0VTJ1 Putative uncharacterized protein n=4 Tax=Acinetobacter RepID=B0VTJ1_ACIBS Length = 64 Score = 41.2 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRL 43 M +D L F + K+A+ I ++Y W G+ VPE A +L Sbjct: 11 MKTSDVLARF-NAPKIAKLLKISRQAVYQW-GEFVPEAAAFKL 51 >UniRef50_B0VKG4 Putative uncharacterized protein n=3 Tax=Acinetobacter RepID=B0VKG4_ACIBS Length = 83 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEA 46 M + G T +A+ GI S+ WK +P + +RL Sbjct: 1 MNDAQLIDKLGGVTAVARLLGITPPSVSGWKA--IPLDKKIRLAVI 44 >UniRef50_P76063 Uncharacterized protein ydaS n=8 Tax=root RepID=YDAS_ECOLI Length = 98 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Query: 1 MLKT-----DALLYFGSKTKLAQAAGIRLASLYSWKGDL--VPEGRAMRLQEASGGEL 51 M K A G ++ +A+ G+ S+ W + +P R ++ A+ GE+ Sbjct: 1 MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEV 58 >UniRef50_C8U5T9 Putative antirepressor n=3 Tax=Escherichia coli RepID=C8U5T9_ECO10 Length = 114 Score = 40.1 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 7/56 (12%) Query: 1 MLKTD-----ALLYFGSKTKLAQAAGIRLASLYSWKGDL--VPEGRAMRLQEASGG 49 M K + A G ++ +A+ G+ S+ W + +P R ++ A+ G Sbjct: 8 MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATKG 63 >UniRef50_A6WVE7 Putative uncharacterized protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVE7_OCHA4 Length = 79 Score = 39.7 bits (91), Expect = 0.030, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 11 GSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASG-GELQYDPKVYDEY 61 G LA+A I+ ++YSWK VP R + ++ SG + P +Y E Sbjct: 28 GGVVALARALNIKHTAMYSWK--RVPAERVLEIERVSGISRHELRPDLYGEK 77 >UniRef50_A8PM33 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PM33_9COXI Length = 296 Score = 39.7 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 4 TDALLYFGSKTKLAQAAGIRLASLYSWKGDL--VPEGRAMRLQEASGGEL 51 A+ GS +A+ GI +Y+W +P A++++ +GGE+ Sbjct: 7 DKAIYSLGSVRHMAKKLGIHREHIYAWIKGFSKIPLEYALQIEYLTGGEI 56 >UniRef50_C6RPZ4 Putative uncharacterized protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RPZ4_ACIRA Length = 69 Score = 38.9 bits (89), Expect = 0.047, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 1 MLKTDALLYFGSK--TKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYD 54 M D ++ ++ +LA+ ++ W+ +P +Q S G+L+ D Sbjct: 8 MTVDDLKHHYEAQTDAELARILKKTRGAISKWRTHGIPISTQAVIQVQSKGKLKAD 63 >UniRef50_Q3RF79 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa Dixon RepID=Q3RF79_XYLFA Length = 78 Score = 38.2 bits (87), Expect = 0.078, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 17/46 (36%) Query: 1 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEA 46 M + G +A+ I+ S+ W+ +P R L+ Sbjct: 13 MNANQIIDTLGGTAAVARMFKIKQPSVSEWRKTGIPSARLQLLEVV 58 >UniRef50_A5WF42 Putative uncharacterized protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WF42_PSYWF Length = 67 Score = 38.2 bits (87), Expect = 0.088, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 1 MLKTDALLYFG--SKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYD 54 M D ++ + ++ + G S+ W + +P + +Q + +L+ D Sbjct: 3 MTVDDLKRFYKVKTLEEVGKRVGKSKGSISLWNANGIPPEQQAIIQIRTNNKLKAD 58 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.131 0.356 Lambda K H 0.267 0.0392 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 382,038,833 Number of Sequences: 3077464 Number of extensions: 10489526 Number of successful extensions: 26902 Number of sequences better than 1.0e-01: 47 Number of HSP's better than 0.1 without gapping: 41 Number of HSP's successfully gapped in prelim test: 49 Number of HSP's that attempted gapping in prelim test: 26805 Number of HSP's gapped (non-prelim): 90 length of query: 76 length of database: 1,040,396,356 effective HSP length: 47 effective length of query: 29 effective length of database: 895,755,548 effective search space: 25976910892 effective search space used: 25976910892 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 87 (38.2 bits)