12 c3csgA_ Probab=100.00  E-value=2e-44  Score=264.21  Aligned_columns=335  Identities=12%

Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCC
Q ss_conf             99724986689999999999987619879999749989999999997522466888406997085788889978984788
Q batch____        37 FNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTG  116 (388)
Q Consensus        37 ~~~wg~~~~~~~~~~~~~~~f~~~~gikV~~v~~~~~~~~~~kl~~~~~ag~~~~~~~Dv~~~~~~~~~~~~~~g~l~~l  116 (388)
                      +..|...+...+.+++++++|||++||||++++   .+++.+||.+.+++|.    .|||+.++..++..++.+|+|++|
T Consensus         2 l~vW~~~~~~~~~~~e~~~~Fek~tGIkV~~~~---~~d~~~kl~~~~asG~----~PDI~~~~~~~~~~~~~~G~L~~L   74 (458)
T c3csgA_           2 LVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEH---PDKLEEKFPQVAATGD----GPDIIFWAHDRFGGYAQSGLLAEI   74 (458)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHCCCEEEEC---CTTHHHHHHHHHTTTC----SCSEEEEEHHHHHHHHHTTCBCCC
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE---CCCHHHHHHHHHHCCC----CCCEEEECCHHHHHHHHCCCEECC
T ss_conf             899970853578999999987203796899986---2107999999983899----971999872127889978982137


Q ss_pred             CHHHCCCHHHCCCHHHHHHHCCCCCCEEEEEEECCEEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf             96672102202310223332155884248876314189998503504789998999974475234454327776520689
Q batch____       117 WAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAF  196 (388)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~g~~y~iP~~~~~~~l~YNkd~~~~~P~T~del~~~a~~~~~~~~~~~~~~~~~~~~  196 (388)
                      ++.   .....++.......++++|++||||+..++.+++||||+|+++|+|||||.+.+++++.+...+..........
T Consensus        75 ~~~---~~~~d~~~~~~~~~~~~dGk~YgiP~~~~~~~l~YNkdlf~e~P~Twdel~~~a~klk~~g~~~~~~~~~~~~~  151 (458)
T c3csgA_          75 TPD---KAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYF  151 (458)
T ss_dssp             CCC---HHHHTTBCHHHHHTTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCTTCHHH
T ss_pred             CCH---HHHHHHHHHHHHHHEEECCEEEEEECCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHH
T ss_conf             810---43565302565630778897999752771479998066612123688899999999885798306733642057


Q ss_pred             HHHHHHHHCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHH
Q ss_conf             9999998314433224677-545462657999999998766211356655788478888852487679995088999998
Q batch____       197 LEQLLIMLTPDPAALKEAP-DDATFARVTAPLWQYLDVLHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQK  275 (388)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~  275 (388)
                      .........+......+.. +......+.+++.+.++.+.++...+......+..+....|.+|+++|.+.+.+......
T Consensus       152 ~~~~~~~~gg~~~~~~~~~~~~~~~~l~sp~~~~al~~~~~l~~~g~~~~~~~~~~~~~~F~~G~~am~~~g~w~~~~~~  231 (458)
T c3csgA_         152 TWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNID  231 (458)
T ss_dssp             HHHHHHHTTCEEEEECSSSEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTCEEEEEECGGGHHHHH
T ss_pred             HHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHH
T ss_conf             99999985642001268523456634389999999999999997089898889778989986497459984503355674


Q ss_pred             HHCCCCCCCEEEEEC--CCCCEEEEEEEEEECCCCCHHHHHHHHH-HHCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHH
Q ss_conf             624787775157643--8863000058999889999899999999-9818899999997416888763314639988986
Q batch____       276 IASGDLPASSYSFGF--REGMIGNVHFVTIPANANASAAAKVVAN-FLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRE  352 (388)
Q Consensus       276 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~I~~~s~n~eaA~~fi~-~l~s~e~Q~~~~~~~~~~~~~~~~~~~l~~~~~~  352 (388)
                      ...........+...  +..++.++.+++|+++|+|+|+|++||+ |++++|.|..+.+..  +.+++......+.....
T Consensus       232 ~~~~~~~v~~~P~~~g~~~~~~~g~~~~~I~~~SknkeaA~~Fl~~~~~s~e~~~~~~~~~--~~~~~~~~~~~~~~~~~  309 (458)
T c3csgA_         232 TSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDK--PLGAVALKSYEEELAKD  309 (458)
T ss_dssp             HHTCCEEEECCCEETTEECCCEEEEEEEEEBTTCTTHHHHHHHHHHTTSSHHHHHHHHHHS--CCCEESBHHHHHHHTTS
T ss_pred             CCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCC--CCCCCCCCCCCHHHHCC
T ss_conf             1798613687135688877416787889982898798999999998839989999997318--98874210011144318


Q ss_pred             HHCCCCHHHHHHHCCCCC----HHHHHHHHHHHHH
Q ss_conf             520236234321103589----8899999999998
Q batch____       353 SLQSRMPQDLPPVLAEPH----AGWVNALEQEWLH  383 (388)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~W~~  383 (388)
                      .......+......+.|.    ..+...+..+-++
T Consensus       310 p~~~~~~~~~~~~~~~P~~p~~~~i~~~i~~al~~  344 (458)
T c3csgA_         310 PRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVIN  344 (458)
T ss_dssp             HHHHHHHHHHHHSEECCCSTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             32899999874283466884488899999999999