26/01/2012 23:20:10 : INFO  : Run start: Thu Jan 26 23:20:10 GMT 2012
26/01/2012 23:20:12 : INFO  : Initialised job
26/01/2012 23:20:13 : INFO  : Renaming log file 'phyre2_20120126_232010.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/phyre_20120126_232010.log'
26/01/2012 23:20:14 : INFO  : Initialised job:
Sequence
>batch____
MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKI
DDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRRNNNYQFIVTINSKNYGCS
LDNTDINWCSIVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFETMIKPQFA
DRIYFSNCLPVDPTSTRPTYFGDTDGSVGAVLFALFATGHLGIMAEGENFLSQLLNIEDE
VLNVLLRENFNEQLNTNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDRF
SNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYSGIKDYP
VCFYDPKYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIIN
GKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRERIGETG
TVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL


26/01/2012 23:20:14 : INFO  : Checked sequence
26/01/2012 23:20:15 : INFO  : Finding homologues with PSI-BLAST
26/01/2012 23:20:16 : INFO  : PSI-BLAST 3 iterations
26/01/2012 23:21:48 : INFO  : PSI-BLAST 5 iterations
26/01/2012 23:23:23 : INFO  : Finished PSI-BLAST
26/01/2012 23:23:25 : INFO  : Running Buildali to generate a3m file
26/01/2012 23:25:58 : INFO  : Converting to HMM
26/01/2012 23:25:59 : INFO  : Calibrating HMM
26/01/2012 23:26:15 : INFO  : Searching HMM database
26/01/2012 23:37:33 : INFO  : Finished buildali
26/01/2012 23:37:34 : INFO  : Predicting secondary structure
26/01/2012 23:37:36 : INFO  : Predicted secondary structure (PSI-Pred)
26/01/2012 23:37:37 : INFO  : Predicting Disordered regions
26/01/2012 23:37:38 : INFO  : Predicted Disorder (Disopred)
26/01/2012 23:37:39 : INFO  : Running memsat_svm check
26/01/2012 23:40:36 : INFO  : Globular protein
26/01/2012 23:40:37 : INFO  : Predicted Transmembrane (memsat_svm) ID '754e7a3b09ca1d1c'
26/01/2012 23:40:37 : INFO  : Initialising fold library search
26/01/2012 23:40:39 : INFO  : Initialised search input
26/01/2012 23:40:39 : INFO  : Building Ensemble models
26/01/2012 23:40:41 : INFO  : Building hh.d3c5wc1.model.1.pdb
26/01/2012 23:40:46 : INFO  : Building hh.d1jk7a_.model.2.pdb
26/01/2012 23:40:51 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.d1jk7a_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/d1jk7a_.2.pdb
26/01/2012 23:40:53 : INFO  : Building hh.d1s70a_.model.3.pdb
26/01/2012 23:41:00 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.d1s70a_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/d1s70a_.3.pdb
26/01/2012 23:41:02 : INFO  : Building hh.d2p6ba1.model.4.pdb
26/01/2012 23:41:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.d2p6ba1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/d2p6ba1.4.pdb
26/01/2012 23:41:10 : INFO  : Building hh.c2jogA_.model.5.pdb
26/01/2012 23:41:18 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.c2jogA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/c2jogA_.5.pdb
26/01/2012 23:41:21 : INFO  : Building hh.c2p6bC_.model.6.pdb
26/01/2012 23:41:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.c2p6bC_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/c2p6bC_.6.pdb
26/01/2012 23:41:33 : INFO  : Building hh.c3nx2B_.model.7.pdb
26/01/2012 23:41:43 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.c3nx2B_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/c3nx2B_.9.pdb
26/01/2012 23:41:47 : INFO  : Building hh.c2qjcA_.model.8.pdb
26/01/2012 23:41:56 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/hh.c2qjcA_.model.8.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/754e7a3b09ca1d1c/c2qjcA_.11.pdb
26/01/2012 23:42:00 : INFO  : Building d3c5wc1.1.pdb
26/01/2012 23:42:11 : INFO  : Building d1jk7a_.2.pdb
26/01/2012 23:42:19 : INFO  : Building d1s70a_.3.pdb
26/01/2012 23:42:28 : INFO  : Building d2p6ba1.4.pdb
26/01/2012 23:42:39 : INFO  : Building c2jogA_.5.pdb
26/01/2012 23:42:49 : INFO  : Building c2p6bC_.6.pdb
26/01/2012 23:43:04 : INFO  : Building c1auiA_.7.pdb
26/01/2012 23:43:17 : INFO  : Building d1auia_.8.pdb
26/01/2012 23:43:27 : INFO  : Building c3nx2B_.9.pdb
26/01/2012 23:43:35 : INFO  : Building c3icfB_.10.pdb
26/01/2012 23:43:45 : INFO  : Building c2qjcA_.11.pdb
26/01/2012 23:43:55 : INFO  : Building c3nadB_.12.pdb
26/01/2012 23:44:04 : INFO  : Building d1s95a_.13.pdb
26/01/2012 23:44:13 : INFO  : Building c2zbmA_.14.pdb
26/01/2012 23:44:22 : INFO  : Building d2nxfa1.15.pdb
26/01/2012 23:44:33 : INFO  : Building c1wao4_.16.pdb
26/01/2012 23:44:47 : INFO  : Building d1ii7a_.17.pdb
26/01/2012 23:44:56 : INFO  : Building d2gc9a1.18.pdb
26/01/2012 23:45:03 : INFO  : Building d1uf3a_.19.pdb
26/01/2012 23:45:11 : INFO  : Building c2dfjA_.20.pdb
26/01/2012 23:46:55 : INFO  : Finished HH model building
26/01/2012 23:46:57 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
26/01/2012 23:48:04 : INFO  : html domain output complete ID '754e7a3b09ca1d1c'
26/01/2012 23:57:34 : INFO  : Run end  : Thu Jan 26 23:57:33 GMT 2012
