Phyre 2 alignment of P37627 with c2ftcB_

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Job Description | P37627
Confidence | 9.80% | Date | Wed Jan 25 15:20:52 GMT 2012
Rank | 58 | Aligned Residues | 24
% Identity | 33% | Template | c2ftcB_
PDB info | PDB header:ribosome | Chain: B: PDB Molecule:mitochondrial ribosomal protein l2; | PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
Resolution | 12.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 364 | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | D | P | K | Y | K | I | M | A | N | H | H | G | I | T | F | D | D | Q | R | K | R | Y | I | I | G | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | D | P | C | R | . | . | . | S | A | D | I | A | L | V | A | G | G | S | R | K | R | W | I | I | A | T
Template Known Secondary structure |  |  |  | T | T | S | . | . | . | S | S |  | B |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 131 | . | . | . | . |  |  |  | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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