Phyre 2 alignment of P37627 with c2go4A_

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Job Description | P37627
Confidence | 5.51% | Date | Wed Jan 25 15:20:52 GMT 2012
Rank | 100 | Aligned Residues | 29
% Identity | 28% | Template | c2go4A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine | PDBTitle: crystal structure of aquifex aeolicus lpxc complexed with tu-514
Resolution | 2.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |  | . | . | . | . | 340 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | E | N | V | H | V | L | A | G | N | H | E | T | N | C | N | . | G | N | Y | M | Q | N | F | T | R | M | K | P | L | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | N | T | L | V | L | G | K | D | K | V | Y | N | P | E | G | L | R | Y | E | N | E | P | V | R | H | K | V | F | D
Template Known Secondary structure |  | T | T |  |  |  |  |  | S | S |  | B |  | S | T | T |  |  | S | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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