 |
| Job Description | P64550 | | Confidence | 2.08% | Date | Thu Jan 5 12:09:22 GMT 2012 |
| Rank | 94 | Aligned Residues | 44 |
| % Identity | 14% | Template | c1bctA_ |
| PDB info |
PDB header:photoreceptor | Chain: A: PDB Molecule:bacteriorhodopsin; |
PDBTitle: three-dimensional structure of proteolytic fragment 163-2312 of bacterioopsin determined from nuclear magnetic3 resonance data in solution
|
| Resolution | UNK |
|
|   |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | N | L | A | D | I | L | A | Y | V | T | F | Q | S | P | V | Y | V | A | I | L | L | V | V | G | A | D | W | H | Q | I | M | A | A | V | S | S | N | I | V | V | S | M | L |
| Query Conservation |   |
  |   |
|   |
|   |
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |
|   |
|
|   |
|
|   |
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|
| Template Sequence |   |
A | S | T | F | K | V | L | R | N | V | T | V | V | L | W | S | A | Y | P | V | V | W | L | I | G | S | E | G | A | G | I | V | P | L | N | I | E | T | L | L | F | M | V | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|