34 d1in4a2 Probab=99.49   E-value=1.2e-11  Score=91.37  Aligned_columns=200  Identities=14%

Q ss_pred             CCCCCCCCCHHHHHH---HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCC
Q ss_conf             211000121148988---63144201458608985076578899999998507534797699981008988988875232
Q batch____       202 AFSQIVAVSPKMKHV---VEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGH  278 (513)
Q Consensus       202 ~f~~ii~~S~~~~~~---~~~~~~~a~~~~pvli~Ge~GtGK~~~A~~ih~~s~~~~~~fv~i~c~~~~~~~~~~~lfg~  278 (513)
                      +|++++|.+.....+   +.....-.....++||+|+|||||+++|+++.+.   -+.+|+.++|.............  
T Consensus         7 ~~~~iiG~~~~~~~l~~~i~~~~~~~~~~~~iLl~GppG~GKT~la~~ia~~---l~~~~~~~~~~~~~~~~~~~~~~--   81 (223)
T d1in4a2           7 SLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASE---LQTNIHVTSGPVLVKQGDMAAIL--   81 (223)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHH---HTCCEEEEETTTCCSHHHHHHHH--
T ss_pred             CHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH---HCCCEEEEEECCEEEECCCHHHH--
T ss_conf             8878036099999999999998736875773899758997864799999998---48987998410001100001235--


Q ss_pred             CCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCHHHHHH
Q ss_conf             23786484562479859982258899899999999984594877589874684047860688997889876997368886
Q batch____       279 APEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGMFREDLYY  358 (513)
Q Consensus       279 ~~~~~~g~~~~a~~gtl~l~~i~~l~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~r~i~~t~~~l~~~~~~~~f~~~l~~  358 (513)
                              ......+.+++|+++.+..+.+..++..+++        .......+.++..++...      ..+...+..
T Consensus        82 --------~~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~i~~~~~~~------~~~~~~~~~  139 (223)
T d1in4a2          82 --------TSLERGDVLFIDEIHRLNKAVEELLYSAIED--------FQIDIQPFTLVGATTRSG------LLSSPLRSR  139 (223)
T ss_dssp             --------HHCCTTCEEEEETGGGCCHHHHHHHHHHHHT--------SCCCCCCCEEEEEESCGG------GSCHHHHTT
T ss_pred             --------HHHCCCCCEECCCCCCCCHHHHHHHHHHHHC--------CCCCCCCEEEEEECCCCC------CCCCHHHHH
T ss_conf             --------5530355011000002488899999999840--------100227806999606853------234023321


Q ss_pred             HCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH---HHHCCCCCC
Q ss_conf             32724886086344600179999999999999946898667989998851289998368999999999---985689811
Q batch____       359 RLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRA---LTQLDGYEL  435 (513)
Q Consensus       359 ~l~~~~i~iPpLreR~eDi~~l~~~~l~~~~~~~~~~~~~~~~~a~~~L~~~~wpGNi~eL~~~i~~~---~~~~~~~~i  435 (513)
                      ......+..|...++..        ++.....+.+..   ++++++..+..+ ++|+.|.+.++++.+   +.......|
T Consensus       140 ~~~~~~~~~~~~~~~~~--------il~~~~~~~~~~---~~~~~l~~i~~~-~~g~~R~~~~~l~~~~~~a~~~~~~~i  207 (223)
T d1in4a2         140 FGIILELDFYTVKELKE--------IIKRAASLMDVE---IEDAAAEMIAKR-SRGTPRIAIRLTKRVRDMLTVVKADRI  207 (223)
T ss_dssp             CSEEEECCCCCHHHHHH--------HHHHHHHHTTCC---BCHHHHHHHHHT-STTCHHHHHHHHHHHHHHHHHHTCSSB
T ss_pred             HHCCCCCCCCCHHHHHH--------HHHHHHHHCCCC---CCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             00002246999899999--------999999862899---876899999997-199989999999999999997088987


Q ss_pred             CHHHH
Q ss_conf             69881
Q batch____       436 RPQDI  440 (513)
Q Consensus       436 ~~~~l  440 (513)
                      +.+++
T Consensus       208 t~~~v  212 (223)
T d1in4a2         208 NTDIV  212 (223)
T ss_dssp             CHHHH
T ss_pred             CHHHH
T ss_conf             98999