120 c1s3sA_ Probab=98.83   E-value=1.4e-07  Score=66.06  Aligned_columns=246  Identities=18%

Q ss_pred             CCCEEEEEECCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-
Q ss_conf             3442799989958999999998617772278997532110221122221111111112211000121148988631442-
Q batch____       144 DSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQK-  222 (513)
Q Consensus       144 ~~~~~~i~~~g~~~~v~~~pi~~~~~~~~~~v~g~v~~~~d~t~~~~~~~~~~~~~~~~f~~ii~~S~~~~~~~~~~~~-  222 (513)
                      ......+...+......+.-+    ...............-..................|+++.|.+....++.+.+.. 
T Consensus       126 ~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~t~i~~~~~~~~~~~~~~~~~~~~~~dIgGl~~~k~~l~~~i~~p  201 (436)
T c1s3sA_         126 KGDIFLVRGGMRAVEFKVVET----DPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELP  201 (436)
T ss_dssp             TTCEEEEEETTEEEEEEEEEE----SSSSEEECCTTCEEECCSCCBCCCTTCCCTTSCCGGGCCSCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEEEEEC----CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHH
T ss_conf             454201245676025666411----3356503583113785155444321012356789534205499999999999975


Q ss_pred             ----------HCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHC--
Q ss_conf             ----------01458608985076578899999998507534797699981008988988875232237864845624--
Q batch____       223 ----------LAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQA--  290 (513)
Q Consensus       223 ----------~a~~~~pvli~Ge~GtGK~~~A~~ih~~s~~~~~~fv~i~c~~~~~~~~~~~lfg~~~~~~~g~~~~a--  290 (513)
                                -......+|++|++||||+++|+++...   .+.+|+.++|..     +-+...|.........|+.|  
T Consensus       202 l~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~---~~~~~~~i~~~~-----l~~~~~g~~e~~l~~~f~~a~~  273 (436)
T c1s3sA_         202 LRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE---TGAFFFLINGPE-----IMSKLAGESESNLRKAFEEAEK  273 (436)
T ss_dssp             HHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHH---HTCEEEEEEHHH-----HHTSCTTHHHHHHHHHHHHHHH
T ss_pred             HHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH---CCCCEEEEEHHH-----HCCCCCCHHHHHHHHHHHHHHH
T ss_conf             01889897488998753898679989978999999874---499589973068-----7001001588889999999975


Q ss_pred             -CCCEEEEECHHHC-----------CHHHHHHHHHHHHCCCEEECCCCCEEEEEEEEECCCCCC---HHHHHHCCCCHHH
Q ss_conf             -7985998225889-----------989999999998459487758987468404786068899---7889876997368
Q batch____       291 -NGGSVLLDEIGEM-----------SPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKN---LVELVQKGMFRED  355 (513)
Q Consensus       291 -~~gtl~l~~i~~l-----------~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~r~i~~t~~~---l~~~~~~~~f~~~  355 (513)
                       ...+||||++|.+           ....-..++..++...         ....+-+|++|+..   ...+...++|.. 
T Consensus       274 ~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~vi~tt~~~~~l~~~l~r~~rf~~-  343 (436)
T c1s3sA_         274 NAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLK---------QRAHVIVMAATNRPNSIDPALRRFGRFDR-  343 (436)
T ss_dssp             TCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCC---------GGGCEEEEEEESCGGGSCGGGTSTTSSCE-
T ss_pred             CCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC---------CCCCEEEEEECCCHHHCCHHHHCCCCCEE-
T ss_conf             09948984000032102578874588999999986430222---------46987999844895888824204240303-


Q ss_pred             HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             886327248860863446001799999999999999468986679899-988512899983689999999999856
Q batch____       356 LYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADL-NTVLTRYAWPGNVRQLKNAIYRALTQL  430 (513)
Q Consensus       356 l~~~l~~~~i~iPpLreR~eDi~~l~~~~l~~~~~~~~~~~~~~~~~a-~~~L~~~~wpGNi~eL~~~i~~~~~~~  430 (513)
                            .+.+.+|.-.+|.+=+..+.             ....++++. +..|....=--.-.+|.+++.+|...+
T Consensus       344 ------~i~~~~P~~~~R~~Il~~~~-------------~~~~l~~d~~~~~la~~t~g~~~~dl~~l~~~a~~~a  400 (436)
T c1s3sA_         344 ------EVDIGIPDATGRLEILQIHT-------------KNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA  400 (436)
T ss_dssp             ------EEECCCCCHHHHHHHHHHTT-------------TTSEECTTCCHHHHHTTCCSCCHHHHHHHHHHHHHHH
T ss_pred             ------EEECCCCCHHHHHHHHHHHH-------------CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             ------66678989999999999984-------------3898988668788998768998899999999999999