100 d1jnra2 Probab=99.78   E-value=1.9e-17  Score=125.11  Aligned_columns=259  Identities=19%

Q ss_pred             CCEEEEEEEECCCHHHHHHHHHHHH----CCCCEEEEECCCCCCE-------EEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             7502329999898989999999998----8980999978887855-------8861434663335533898999998875
Q batch____         3 TTKHSKLLILGSGPAGYTAAVYAAR----ANLQPVLITGMEKGGQ-------LTTTTEVENWPGDPNDLTGPLLMERMHE   71 (321)
Q Consensus         3 ~~~~~dVvIIGaG~AGl~aA~~La~----~G~~V~viE~~~~~G~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (321)
                      ++-+|||+|||||||||+||++|+|    +|++|+||||.+..|+       .................+...+......
T Consensus        18 ~~~e~DVvIIGaGpAGlsAA~~lAr~~~~~G~~V~vlEk~~~~gg~~~~~g~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   97 (356)
T d1jnra2          18 EVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTL   97 (356)
T ss_dssp             EEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHH
T ss_pred             EEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
T ss_conf             47985389998968899999999984563798399997788788101002322326333200014645698999999997


Q ss_pred             HHHHCCCEEEEEEEEEEECCCEEEEEECCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCHHCCCCCCCC
Q ss_conf             21106815853356763101115887128816612202323111334567788322453137641320110004861121
Q batch____        72 HATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAV  151 (321)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (321)
                      .                                .......................+....+..................
T Consensus        98 ~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  145 (356)
T d1jnra2          98 D--------------------------------MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQI  145 (356)
T ss_dssp             H--------------------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCE
T ss_pred             H--------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEE
T ss_conf             3--------------------------------04666899999999603688999996798699807764412541699


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEEE--CCCCEEEEEEECCCCC
Q ss_conf             35753048899999851266289973543321002348899999977989993882799971--4760577775122002
Q batch____       152 IGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTG--DQMGVTGVRLRDTQNS  229 (321)
Q Consensus       152 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~i~~--~~~~~~~~~~~~~~~~  229 (321)
                      ...+............                           -....+.+..+..+..+..  ................
T Consensus       146 ~~~G~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  198 (356)
T d1jnra2         146 MIHGESYKPIIAEAAK---------------------------MAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVRE  198 (356)
T ss_dssp             EEEETTHHHHHHHHHH---------------------------HHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSS
T ss_pred             ECCHHHHHHHHHHHHH---------------------------HCCCCEEEECCCEEEEEEEECCCCCCEEEEEEEECCC
T ss_conf             7360357999999998---------------------------4557818951842899999578565312489996489


Q ss_pred             CCCCEEECCEEEEECCCCCCH--------------------------HHHHHCCCCCCCEEEECC-----------CEEC
Q ss_conf             353024225689804643682--------------------------687405643388388266-----------3223
Q batch____       230 DNIESLDVAGLFVAIGHSPNT--------------------------AIFEGQLELENGYIKVQS-----------GIHG  272 (321)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~g~i~v~~-----------~~~~  272 (321)
                      ..........++++.+.....                          .+.........++.....           ...+
T Consensus       199 ~~~~~i~~~~vila~gg~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~i~v~  278 (356)
T d1jnra2         199 PKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGAMLTQAGFWVCGPEDLMPEEYAKLFPLK  278 (356)
T ss_dssp             SCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBSHHHHHHHHHTCCEECCEECCCCCTTTCCHHHHTTCSSC
T ss_pred             CEEEEEEECCEEECCCCCCEEEECCCCCCCCCCEEEECCCCCCCEEEEEEECCEEECCCEEECCCCCCCCCCCCCCEEEC
T ss_conf             72999940838974777400132123334444136400004882289997082764031021344345313558733586


Q ss_pred             CCCCCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7762688786997114588700-79999999999999999972188667
Q batch____       273 NATQTSIPGVFAAGDVMDHIYR-QAITSAGTGCMAALDAERYLDGLADA  320 (321)
Q Consensus       273 ~~~~t~~~~vfa~GD~a~~~~~-~~~~A~~~G~~Aa~~i~~~l~~~~~~  320 (321)
                      ..++|++||||++|||++...+ ++..|+.+|++||.++.++|.+....
T Consensus       279 ~~~~ts~~gv~a~GDaa~~~~~~~~~~A~~~G~~Aa~~a~~~i~~~~~~  327 (356)
T d1jnra2         279 YNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILEQKPN  327 (356)
T ss_dssp             CTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCEECCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             6535169987994022066564102457898899999999998406886