11/01/2012 02:30:32 : INFO  : Run start: Wed Jan 11 02:30:31 GMT 2012
11/01/2012 02:30:38 : INFO  : Initialised job
11/01/2012 02:30:41 : INFO  : Renaming log file 'phyre2_20120111_023030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/73a762ade1748b15/phyre_20120111_023030.log'
11/01/2012 02:30:42 : INFO  : Initialised job:
Sequence
>batch____
MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVLVTFIGGLYFITHHKKE
ESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEPSAGGEVKTPEQLTPEQRQ
LLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQQLAEQQRLAQQSRTTEQSWQ
QQTRTSQAAPVQAQPRQSKPASSQQPYQDLLQTPAHTTAQSKPQQAAPVARAADAPKPTA
EKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADST
LNRLKMAGHTNCIRLAAGG

11/01/2012 02:30:44 : INFO  : Checked sequence
11/01/2012 02:30:48 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 02:30:49 : INFO  : PSI-BLAST 3 iterations
11/01/2012 02:32:45 : INFO  : PSI-BLAST 5 iterations
11/01/2012 02:34:30 : INFO  : Finished PSI-BLAST
11/01/2012 02:34:34 : INFO  : Running Buildali to generate a3m file
11/01/2012 02:55:24 : INFO  : Converting to HMM
11/01/2012 02:55:27 : INFO  : Calibrating HMM
11/01/2012 02:55:42 : INFO  : Searching HMM database
11/01/2012 03:01:49 : INFO  : Finished buildali
11/01/2012 03:01:52 : INFO  : Predicting secondary structure
11/01/2012 03:02:04 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 03:02:07 : INFO  : Predicting Disordered regions
11/01/2012 03:02:12 : INFO  : Predicted Disorder (Disopred)
11/01/2012 03:02:14 : INFO  : Running memsat_svm check
11/01/2012 03:04:28 : INFO  : Globular protein
11/01/2012 03:04:29 : INFO  : Predicted Transmembrane (memsat_svm) ID '73a762ade1748b15'
11/01/2012 03:04:31 : INFO  : Initialising fold library search
11/01/2012 03:04:34 : INFO  : Initialised search input
11/01/2012 03:04:37 : INFO  : Building Ensemble models
11/01/2012 03:04:41 : INFO  : Building hh.d1utaa_.model.1.pdb
11/01/2012 03:05:00 : INFO  : Building d1utaa_.1.pdb
11/01/2012 03:05:17 : INFO  : Building c1x60A_.2.pdb
11/01/2012 03:05:36 : INFO  : Building c3caiA_.3.pdb
11/01/2012 03:05:55 : INFO  : Building d1bs0a_.4.pdb
11/01/2012 03:06:12 : INFO  : Building d1elua_.5.pdb
11/01/2012 03:06:31 : INFO  : Building c3f9tB_.6.pdb
11/01/2012 03:06:49 : INFO  : Building d1t3ia_.7.pdb
11/01/2012 03:07:08 : INFO  : Building c2k49A_.8.pdb
11/01/2012 03:07:27 : INFO  : Building d1iuga_.9.pdb
11/01/2012 03:07:46 : INFO  : Building c3hdoB_.10.pdb
11/01/2012 03:08:04 : INFO  : Building c3cq6E_.11.pdb
11/01/2012 03:08:22 : INFO  : Building d1m32a_.12.pdb
11/01/2012 03:08:39 : INFO  : Building c2fyfB_.13.pdb
11/01/2012 03:08:56 : INFO  : Building c2yrrA_.14.pdb
11/01/2012 03:09:12 : INFO  : Building d1qz9a_.15.pdb
11/01/2012 03:09:30 : INFO  : Building d1v72a1.16.pdb
11/01/2012 03:09:47 : INFO  : Building c3hqtB_.17.pdb
11/01/2012 03:10:03 : INFO  : Building d1wyua1.18.pdb
11/01/2012 03:10:23 : INFO  : Building c3rggD_.19.pdb
11/01/2012 03:10:43 : INFO  : Building d2f8ja1.20.pdb
11/01/2012 03:11:20 : INFO  : Finished HH model building
11/01/2012 03:11:22 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 03:13:16 : INFO  : html domain output complete ID '73a762ade1748b15'
11/01/2012 03:21:48 : INFO  : Run end  : Wed Jan 11 03:21:47 GMT 2012
