Phyre 2 alignment of P29131 with c2i38A_

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Job Description | P29131
Confidence | 16.60% | Date | Thu Jan 5 11:45:35 GMT 2012
Rank | 84 | Aligned Residues | 25
% Identity | 12% | Template | c2i38A_
PDB info | PDB header:rna binding protein/chimera | Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- | PDBTitle: solution structure of the rrm of srp20
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | K | G | K | E | N | A | D | S | T | L | N | R | L | K | M | A | G | H | T | N | C | I | R | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | E | D | P | R | D | A | A | D | A | V | R | D | L | D | G | R | T | L | C | G | C | R | V | R
Template Known Secondary structure |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  | S | T | T | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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