Phyre 2 Results for P29131

Email | l.a.kelley@imperial.ac.uk
Description | P29131
Date | Thu Jan 5 11:45:35 GMT 2012
Unique Job ID | 73a762ade1748b15

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1utaa_ |
|  | 99.9 | 100 | Fold:Ferredoxin-like Superfamily:Sporulation related repeat Family:Sporulation related repeat
2 | c1x60A_ |
|  | 99.8 | 29 | PDB header:hydrolase Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc
3 | c3caiA_ |
|  | 88.0 | 22 | PDB header:transferase Chain: A: PDB Molecule:possible aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis rv3778c2 protein
4 | d1bs0a_ |
|  | 87.6 | 17 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like
5 | d1elua_ |
|  | 85.5 | 13 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
6 | c3f9tB_ |
|  | 81.6 | 19 | PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution
7 | d1t3ia_ |
|  | 65.9 | 23 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
8 | c2k49A_ |
|  | 59.9 | 10 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein so_3888; PDBTitle: solution nmr structure of upf0339 protein so3888 from shewanella2 oneidensis. northeast structural genomics consortium target sor190
9 | d1iuga_ |
|  | 59.2 | 10 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
10 | c3hdoB_ |
|  | 59.1 | 24 | PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a histidinol-phosphate aminotransferase from2 geobacter metallireducens
11 | c3cq6E_ |
|  | 58.3 | 18 | PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound )
12 | d1m32a_ |
|  | 58.0 | 13 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
13 | c2fyfB_ |
|  | 56.4 | 18 | PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis
14 | c2yrrA_ |
|  | 52.9 | 23 | PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8
15 | d1qz9a_ |
|  | 52.8 | 13 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
16 | d1v72a1 |
|  | 52.6 | 22 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like
17 | c3hqtB_ |
|  | 49.8 | 19 | PDB header:transferase Chain: B: PDB Molecule:cai-1 autoinducer synthase; PDBTitle: plp-dependent acyl-coa transferase cqsa
18 | d1wyua1 |
|  | 47.6 | 20 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Glycine dehydrogenase subunits (GDC-P)
19 | c3rggD_ |
|  | 46.5 | 19 | PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air
20 | d2f8ja1 |
|  | 46.5 | 22 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like
21 | c2k8eA_ |
| not modelled | 46.3 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein yegp; PDBTitle: solution nmr structure of protein of unknown function yegp from e.2 coli. ontario center for structural proteomics target ec0640_1_1233 northeast structural genomics consortium target et102.
22 | d1eg5a_ |
| not modelled | 44.5 | 17 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
23 | c3p3dA_ |
| not modelled | 44.2 | 21 | PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii
24 | d1gcca_ |
| not modelled | 43.5 | 26 | Fold:DNA-binding domain Superfamily:DNA-binding domain Family:GCC-box binding domain
25 | c2adbA_ |
| not modelled | 43.0 | 9 | PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna
26 | d1dq3a4 |
| not modelled | 41.6 | 14 | Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease
27 | c2y9jt_ |
| not modelled | 41.0 | 14 | PDB header:protein transport Chain: T: PDB Molecule:protein prgh; PDBTitle: three-dimensional model of salmonella's needle complex at2 subnanometer resolution
28 | d1u11a_ |
| not modelled | 40.0 | 16 | Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
29 | c2w8wA_ |
| not modelled | 39.7 | 19 | PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser
30 | d2c0ra1 |
| not modelled | 38.5 | 16 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like
31 | c2x7iA_ |
| not modelled | 37.9 | 17 | PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: crystal structure of mevalonate kinase from methicillin-2 resistant staphylococcus aureus mrsa252
32 | c3a2bA_ |
| not modelled | 37.6 | 13 | PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: crystal structure of serine palmitoyltransferase from sphingobacterium2 multivorum with substrate l-serine
33 | d1ztpa1 |
| not modelled | 36.4 | 8 | Fold:eIF4e-like Superfamily:eIF4e-like Family:BLES03-like
34 | d1nz8a_ |
| not modelled | 35.9 | 17 | Fold:Ferredoxin-like Superfamily:N-utilization substance G protein NusG, N-terminal domain Family:N-utilization substance G protein NusG, N-terminal domain
35 | d1wg1a_ |
| not modelled | 35.7 | 8 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
36 | c2fw9A_ |
| not modelled | 35.2 | 16 | PDB header:lyase Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: structure of pure (n5-carboxyaminoimidazole ribonucleotide mutase)2 h59f from the acidophilic bacterium acetobacter aceti, at ph 8
37 | d2hk6a1 |
| not modelled | 33.5 | 15 | Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase
38 | d1jf9a_ |
| not modelled | 33.3 | 17 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like
39 | c3f0hA_ |
| not modelled | 33.2 | 13 | PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution
40 | c3pn8A_ |
| not modelled | 32.3 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:putative phospho-beta-glucosidase; PDBTitle: the crystal structure of 6-phospho-beta-glucosidase from streptococcus2 mutans ua159
41 | c3lp6D_ |
| not modelled | 32.1 | 21 | PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit; PDBTitle: crystal structure of rv3275c-e60a from mycobacterium tuberculosis at2 1.7a resolution
42 | d1qcza_ |
| not modelled | 31.8 | 16 | Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
43 | c3e9kA_ |
| not modelled | 31.1 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:kynureninase; PDBTitle: crystal structure of homo sapiens kynureninase-3-hydroxyhippuric acid2 inhibitor complex
44 | c3trhI_ |
| not modelled | 30.8 | 16 | PDB header:lyase Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii
45 | c2dr1A_ |
| not modelled | 29.2 | 11 | PDB header:transferase Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase; PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
46 | d1m6sa_ |
| not modelled | 28.6 | 16 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like
47 | c1yj7A_ |
| not modelled | 28.6 | 12 | PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj
48 | d1nh8a2 |
| not modelled | 28.1 | 12 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
49 | c3rfaA_ |
| not modelled | 27.8 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine
50 | c2k06A_ |
| not modelled | 27.5 | 13 | PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of the aminoterminal domain of e. coli2 nusg
51 | c3cbfA_ |
| not modelled | 26.8 | 15 | PDB header:transferase Chain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27
52 | c2j75A_ |
| not modelled | 26.7 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase a; PDBTitle: beta-glucosidase from thermotoga maritima in complex with2 noeuromycin
53 | c3hyjD_ |
| not modelled | 26.5 | 22 | PDB header:transcription regulator Chain: D: PDB Molecule:protein duf199/whia; PDBTitle: crystal structure of the n-terminal laglidadg domain of duf199/whia
54 | c3orsD_ |
| not modelled | 26.3 | 17 | PDB header:isomerase,biosynthetic protein Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus
55 | d1xmpa_ |
| not modelled | 26.2 | 18 | Fold:Flavodoxin-like Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
56 | c3nthA_ |
| not modelled | 25.0 | 16 | PDB header:transcription Chain: A: PDB Molecule:maternal protein tudor; PDBTitle: crystal structure of tudor and aubergine [r13(me2s)] complex
57 | c3mafB_ |
| not modelled | 24.1 | 17 | PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form)
58 | d1js3a_ |
| not modelled | 23.7 | 6 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Pyridoxal-dependent decarboxylase
59 | c2hzpA_ |
| not modelled | 23.7 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:kynureninase; PDBTitle: crystal structure of homo sapiens kynureninase
60 | c2p2uA_ |
| not modelled | 23.6 | 41 | PDB header:dna binding protein Chain: A: PDB Molecule:host-nuclease inhibitor protein gam, putative; PDBTitle: crystal structure of putative host-nuclease inhibitor2 protein gam from desulfovibrio vulgaris
61 | c2h31A_ |
| not modelled | 23.3 | 18 | PDB header:ligase, lyase Chain: A: PDB Molecule:multifunctional protein ade2; PDBTitle: crystal structure of human paics, a bifunctional carboxylase and2 synthetase in purine biosynthesis
62 | c3nohA_ |
| not modelled | 23.1 | 50 | PDB header:peptide binding protein Chain: A: PDB Molecule:putative peptide binding protein; PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution
63 | d1u0bb1 |
| not modelled | 22.5 | 16 | Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
64 | c3bfjK_ |
| not modelled | 21.3 | 15 | PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase
65 | c2q5cA_ |
| not modelled | 21.1 | 18 | PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum
66 | d2cpia1 |
| not modelled | 21.0 | 11 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
67 | d1oj4a2 |
| not modelled | 20.4 | 11 | Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE
68 | d1lbqa_ |
| not modelled | 20.1 | 13 | Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase
69 | c2huuA_ |
| not modelled | 20.1 | 13 | PDB header:transferase Chain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine
70 | c3ffrA_ |
| not modelled | 20.0 | 13 | PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution
71 | d1rk8a_ |
| not modelled | 19.7 | 11 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
72 | d1fg7a_ |
| not modelled | 19.5 | 17 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like
73 | c3ox4D_ |
| not modelled | 19.3 | 19 | PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor
74 | c2eqkA_ |
| not modelled | 19.0 | 43 | PDB header:transcription Chain: A: PDB Molecule:tudor domain-containing protein 4; PDBTitle: solution structure of the tudor domain of tudor domain-2 containing protein 4
75 | d1wsta1 |
| not modelled | 18.9 | 10 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like
76 | d2erra1 |
| not modelled | 18.4 | 8 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
77 | c3o6cA_ |
| not modelled | 18.1 | 12 | PDB header:transferase Chain: A: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni
78 | c3hyiA_ |
| not modelled | 18.0 | 18 | PDB header:transcription regulator Chain: A: PDB Molecule:protein duf199/whia; PDBTitle: crystal structure of full-length duf199/whia from thermatoga maritima
79 | d1s0aa_ |
| not modelled | 17.9 | 6 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like
80 | c2z1sA_ |
| not modelled | 17.8 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase b; PDBTitle: beta-glucosidase b from paenibacillus polymyxa complexed2 with cellotetraose
81 | c2ordA_ |
| not modelled | 17.6 | 15 | PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
82 | d1kvka2 |
| not modelled | 17.1 | 19 | Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Mevalonate kinase
83 | c2hvzA_ |
| not modelled | 16.8 | 7 | PDB header:rna binding protein Chain: A: PDB Molecule:splicing factor, arginine/serine-rich 7; PDBTitle: solution structure of the rrm domain of sr rich factor 9g8
84 | c2i38A_ |
| not modelled | 16.6 | 12 | PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20
85 | c2zoxA_ |
| not modelled | 16.1 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:cytosolic beta-glucosidase; PDBTitle: crystal structure of the covalent intermediate of human cytosolic2 beta-glucosidase
86 | c2iruA_ |
| not modelled | 16.0 | 24 | PDB header:transferase Chain: A: PDB Molecule:putative dna ligase-like protein rv0938/mt0965; PDBTitle: crystal structure of the polymerase domain from mycobacterium2 tuberculosis ligase d
87 | c2dclB_ |
| not modelled | 15.9 | 19 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3
88 | d1fsha_ |
| not modelled | 15.9 | 16 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain
89 | c3md3A_ |
| not modelled | 15.9 | 4 | PDB header:rna binding protein Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the first two rrm domains of yeast poly(u)2 binding protein (pub1)
90 | d2p5ia1 |
| not modelled | 15.7 | 27 | Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:LplA-like
91 | c3ml6D_ |
| not modelled | 15.5 | 15 | PDB header:protein transport Chain: D: PDB Molecule:chimeric complex between protein dishevlled2 homolog dvl-2 PDBTitle: a complex between dishevlled2 and clathrin adaptor ap-2
92 | d1pbga_ |
| not modelled | 15.2 | 14 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Family 1 of glycosyl hydrolase
93 | d1o51a_ |
| not modelled | 14.6 | 16 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:DUF190/COG1993
94 | c1v02F_ |
| not modelled | 14.2 | 20 | PDB header:hydrolase Chain: F: PDB Molecule:dhurrinase; PDBTitle: crystal structure of the sorghum bicolor dhurrinase 1
95 | d1v02a_ |
| not modelled | 14.2 | 20 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Family 1 of glycosyl hydrolase
96 | d2a21a1 |
| not modelled | 14.2 | 15 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase
97 | d2k7ia1 |
| not modelled | 14.1 | 11 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
98 | c2k7iB_ |
| not modelled | 14.1 | 11 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0339 protein atu0232; PDBTitle: solution nmr structure of protein atu0232 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att3. ontario center for structural proteomics target atc0223.
99 | d1rv3a_ |
| not modelled | 14.1 | 10 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like