144 c3csgA_ Probab=97.02   E-value=0.015  Score=31.12  Aligned_columns=233  Identities=15%

Q ss_pred             EEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCC--CCCEEEECCHHHHHHHHHCC----------
Q ss_conf             599999638846999999855520346320476328878887764218--70478506968999998318----------
Q batch____        32 HIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKG--DIDANAFQHKPYLDQQLKDR----------   99 (271)
Q Consensus        32 ~i~ig~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~a~~~g--~~D~~~~~~~~~~~~~~~~~----------   99 (271)
                      +|+|=.........+..+.+.|.++.|++|+.....+.........++  .-|+........-.-..++.          
T Consensus         1 ~l~vW~~~~~~~~~~~e~~~~Fek~tGIkV~~~~~~d~~~kl~~~~asG~~PDI~~~~~~~~~~~~~~G~L~~L~~~~~~   80 (458)
T c3csgA_           1 KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAF   80 (458)
T ss_dssp             CEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEHHHHHHHHHTTCBCCCCCCHHH
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEECCCCHHHH
T ss_conf             58999708535789999999872037968999862107999999983899971999872127889978982137810435


Q ss_pred             -------------------CCCEEEEECCCCCEEEEECCCCCCHHHC--------CCCCEEEECCCCCHHHHHHHHHHHC
Q ss_conf             -------------------9838998123100035741566664450--------4797897238760279999999977
Q batch____       100 -------------------GYKLVAVGNTFVYPIAGYSKKIKSLDEL--------QDGSQVAVPNDPTNLGRSLLLLQKV  152 (271)
Q Consensus       100 -------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~l--------~~~k~~~~~~~~~~~~~~~~~l~~~  152 (271)
                                         +++...........--+......++.++        ..+.................++...
T Consensus        81 ~d~~~~~~~~~~~~dGk~YgiP~~~~~~~l~YNkdlf~e~P~Twdel~~~a~klk~~g~~~~~~~~~~~~~~~~~~~~~g  160 (458)
T c3csgA_          81 QDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADG  160 (458)
T ss_dssp             HTTBCHHHHHTTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHEEECCEEEEEECCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
T ss_conf             65302565630778897999752771479998066612123688899999999885798306733642057999999856


Q ss_pred             CCCCCCCCCCCC-------------CCHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             983456655544-------------3211200144533899758678989973067549971567887604554632786
Q batch____       153 GLIKLKDGVGLL-------------PTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIF  219 (271)
Q Consensus       153 gl~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~vDa~~~~~~~~~~~~~~~~~~~i~  219 (271)
                      |...........             ..................+..+....+.+|++...+.+.-........+....+.
T Consensus       161 g~~~~~~~~~~~~~~~~l~sp~~~~al~~~~~l~~~g~~~~~~~~~~~~~~F~~G~~am~~~g~w~~~~~~~~~~~~~v~  240 (458)
T c3csgA_         161 GYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVT  240 (458)
T ss_dssp             CEEEEECSSSEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEEE
T ss_pred             CHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCEE
T ss_conf             42001268523456634389999999999999997089898889778989986497459984503355674179861368


Q ss_pred             CCC-----CCCCEEEE--EEEECCCCCHHHHHHHHH-HHCCHHHHHHHHHHCC
Q ss_conf             058-----88887999--999443378189999999-9789799999998659
Q batch____       220 VED-----KESPYVNL--IVTREDNKDAENVKKFVQ-AYQSDEVYEAANKVFN  264 (271)
Q Consensus       220 ~~~-----~~~~~~~~--~~~~~~~~~~e~~k~f~~-~~~s~e~~~~i~~~y~  264 (271)
                      .-+     ...++...  +++.+..+|+|++.+|++ ++.++|.++.+.+...
T Consensus       241 ~~P~~~g~~~~~~~g~~~~~I~~~SknkeaA~~Fl~~~~~s~e~~~~~~~~~~  293 (458)
T c3csgA_         241 VLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKP  293 (458)
T ss_dssp             CCCEETTEECCCEEEEEEEEEBTTCTTHHHHHHHHHHTTSSHHHHHHHHHHSC
T ss_pred             ECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCC
T ss_conf             71356888774167878899828987989999999988399899999973189