250 c1s3sA_ Probab=96.45   E-value=0.018  Score=33.20  Aligned_columns=113  Identities=23%

Q ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHH
Q ss_conf             12578898899987999888899999946885873269986888767998889853856983350007578799999831
Q batch____        33 NLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLG  112 (506)
Q Consensus        33 s~~i~~Ge~~~lvG~nGsGKSTLl~~l~G~~~~~~G~i~~~G~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~~~~~  112 (506)
                      ++.+.+..-+.|.|+.|+||||+++.++..+...  -+.+++.++......+.                           
T Consensus       210 ~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~~~--~~~i~~~~l~~~~~g~~---------------------------  260 (436)
T c1s3sA_         210 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGES---------------------------  260 (436)
T ss_dssp             HCCCCCCCEEEEECSTTSSHHHHHHHHHHHHTCE--EEEEEHHHHHTSCTTHH---------------------------
T ss_pred             HCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC--EEEEEHHHHCCCCCCHH---------------------------
T ss_conf             4889987538986799899789999998744995--89973068700100158---------------------------


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECC----------CCCCCCH
Q ss_conf             123312599988999999999876287211079468889999999999989763995999736----------1016899
Q batch____       113 RYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDE----------PTSSLTE  182 (506)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~LSgGe~qrv~la~al~~~p~illlDE----------Pt~~LD~  182 (506)
                                                              ..+-+-.+..|-...|.++++||          ..+..+.
T Consensus       261 ----------------------------------------e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~  300 (436)
T c1s3sA_         261 ----------------------------------------ESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER  300 (436)
T ss_dssp             ----------------------------------------HHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHH
T ss_pred             ----------------------------------------HHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHH
T ss_conf             ----------------------------------------8889999999975099489840000321025788745889


Q ss_pred             HHHHHHHHHHHHH-HHCCCEEEEEECCHHHHHH
Q ss_conf             9999999999987-4128679999278889877
Q batch____       183 KEVNHLFTIIRKL-KERGCGIVYISHKMEEIFQ  214 (506)
Q Consensus       183 ~~~~~l~~~l~~l-~~~g~tvi~isH~~~~i~~  214 (506)
                      .....+...+..+ ...++.+|.++++++.++.
T Consensus       301 ~~~~~~~~~~~~~~~~~~v~vi~tt~~~~~l~~  333 (436)
T c1s3sA_         301 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDP  333 (436)
T ss_dssp             HHHHHHHHHHHHCCGGGCEEEEEEESCGGGSCG
T ss_pred             HHHHHHHHHHCCCCCCCCEEEEEECCCHHHCCH
T ss_conf             999999864302224698799984489588882