101 c1mkyA_ Probab=97.96   E-value=4.4e-05  Score=48.30  Aligned_columns=185  Identities=15%

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             89998799988889999994688587326998688876799888985385698335000757879999983112331259
Q batch____        41 IHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF  120 (506)
Q Consensus        41 ~~~lvG~nGsGKSTLl~~l~G~~~~~~G~i~~~G~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~~~~~~~~~~~~~  120 (506)
                      .++|||+.++|||||++-|.|  ....+...+.|..                                            
T Consensus         2 tVaivG~pNvGKStL~N~ltr--~~~~~~~~~~g~~--------------------------------------------   35 (407)
T c1mkyA_           2 TVLIVGRPNVGKSTLFNKLVK--DPVQDTVEWYGKT--------------------------------------------   35 (407)
T ss_dssp             EEEEECCTTSSHHHHHHHHHC--CCSEEEEEETTEE--------------------------------------------
T ss_pred             EEEEECCCCCCHHHHHHHHHC--CCEEEEEEECCEE--------------------------------------------
T ss_conf             299977998888899999849--9639999759989--------------------------------------------


Q ss_pred             CCHHHHHHHHHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             99889999999998762872110794688899999999999897639959997361016899999999999998741286
Q batch____       121 VDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGC  200 (506)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~l~~~~~~~v~~LSgGe~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~g~  200 (506)
                                   +...+..-..+.....+.....+.+.  .++..---++++=+...++.+....    +++.+++.+.
T Consensus        36 -------------~~lvDTpG~~~~~~~~~~~~~~~~~~--~~i~~aDlil~VvD~~~~~~~~d~~----i~~~Lr~~~k   96 (407)
T c1mkyA_          36 -------------FKLVDTCGVFDNPQDIISQKXKEVTL--NXIREADLVLFVVDGKRGITKEDES----LADFLRKSTV   96 (407)
T ss_dssp             -------------EEEEECTTTTSSGGGCCCHHHHHHHH--HHHTTCSEEEEEEETTTCCCHHHHH----HHHHHHHHTC
T ss_pred             -------------EEEEECCCCCCCCHHHHHHHHHHHHH--HHHHHCCEEEEEECCCCCCCHHHHH----HHHHHHHHCC
T ss_conf             -------------99995567310787799899999999--9998679899997189878987999----9999986125


Q ss_pred             EEEEEECCHH----HHHHHCCEEEEECCCCEEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf             7999927888----987730337792186187515366501111001012233222222233332222321000022125
Q batch____       201 GIVYISHKME----EIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ  276 (506)
Q Consensus       201 tvi~isH~~~----~i~~~~d~i~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~  276 (506)
                      .++++-+-.+    ..........-+.-|..+........-.+.+.....................+..++         
T Consensus        97 ~~ilv~NK~D~~~~~~~~~~~ef~~lg~~~~~~ISA~~g~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~---------  167 (407)
T c1mkyA_          97 DTILVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTXLETIIKKLEEKGLDLESKPEITDAIK---------  167 (407)
T ss_dssp             CEEEEEESCCSHHHHHHHTHHHHGGGSSCSCEECBTTTTBSHHHHHHHHHHHHHHTTCCSSSCCCCCSCEE---------
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------
T ss_conf             43001100016672246889999836998289986245762332100111111111111221223443210---------


Q ss_pred             CCEEEHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
Q ss_conf             51111000232024455443100100002577507720
Q batch____       277 PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE  314 (506)
Q Consensus       277 ~~l~~vsl~i~~Ge~~~iiG~nGsGKSTLl~~l~G~~~  314 (506)
                                     ++++|..++|||||++.|+|...
T Consensus       168 ---------------iaiiG~~n~GKSSLin~l~~~~~  190 (407)
T c1mkyA_         168 ---------------VAIVGRPNVGKSTLFNAILNKER  190 (407)
T ss_dssp             ---------------EEEECSTTSSHHHHHHHHHTSTT
T ss_pred             ---------------CCCCCCCCCCHHHHHHHHCCCCE
T ss_conf             ---------------00237666652658887408842