Phyre 2 alignment of P0AES0 with c2pvpB_

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Job Description | P0AES0
Confidence | 81.65% | Date | Thu Jan 5 11:24:04 GMT 2012
Rank | 42 | Aligned Residues | 42
% Identity | 19% | Template | c2pvpB_
PDB info | PDB header:ligase | Chain: B: PDB Molecule:d-alanine-d-alanine ligase; | PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | I | L | W | P | R | L | R | L | S | W | Q | R | R | R | H | H | M | I | T | G | R | M | D | F | C | M | D | E | R | G | L | K | V | Y | E | Y | N | A | D | S | A | S | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Sequence |  | E | Q | L | K | E | N | F | K | K | L | Y | S | D | L | F | D | G | A | I | I | . | R | C | D | F | F | V | I | E | N | E | V | Y | L | N | E | I | N | P | . | I | P | G | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  | . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | . | S |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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