Phyre 2 alignment of P0AES0 with c2dlnA_

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Job Description | P0AES0
Confidence | 81.76% | Date | Thu Jan 5 11:24:04 GMT 2012
Rank | 41 | Aligned Residues | 30
% Identity | 23% | Template | c2dlnA_
PDB info | PDB header:ligase(peptidoglycan synthesis) | Chain: A: PDB Molecule:d-alanine--d-alanine ligase; | PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 314 | . | . | . | . | . | 320 | . | . | . | . | . |  | . | . | . | . | 330 | . | . |  |  |  | . | . | . | . | . | . | . | 340 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | G | R | M | D | F | C | M | D | E | R | G | . | L | K | V | Y | E | Y | N | . | . | . | A | D | S | A | S | C | H | T | E | A | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | W | G | R | I | D | V | M | L | D | S | D | G | Q | F | Y | L | L | E | A | N | T | S | P | G | M | T | S | H | S | L | V | P | M | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  | S | S |  |  |  | S | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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