226 c2iirJ_ Probab=20.02   E-value=58  Score=13.18  Aligned_columns=142  Identities=13%

Q ss_pred             CCCCEEEEEECCEEEEEEECCCCCEEEECCCHHHHHHHHHH--HHHHCCCCCCCCHHHHCCCCCHHHHHHHHCCHHHCCC
Q ss_conf             86565999817503788972998488871787899999999--9981875372742655788698999987428152589
Q batch____       159 PTERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWI--WRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFSQP  236 (369)
Q Consensus       159 ~~~~r~~lNiGGIaNiT~l~~~~~v~afDtGPgN~llD~~~--~~~~g~~yD~~G~~A~~G~v~~~lL~~ll~~pyf~~~  236 (369)
                      .+.+.++.+|||=+.++.+.+|   ..+||--|..-+|-.+  .|....+.-.=-.+..++...++-++++|+.      
T Consensus       199 ~~~nlIv~HLG~G~Si~Ai~~G---ksvDtsmG~tpleGl~m~tRsG~ldp~~l~~l~~~~~~s~~e~~~~L~~------  269 (400)
T c2iirJ_         199 EELKIITCHIGNGASVAAVKYG---KCVDTSMGFTPLEGLVMGTRSGDLDPAIPFFIMEKEGISPQEMYDILNK------  269 (400)
T ss_dssp             GGCEEEEEEESSSEEEEEEETT---EEEEESCCSSTTSSSCCSSCCCSCCTTHHHHHHHHHTCCHHHHHHHHHH------
T ss_pred             HHCCEEEEECCCCEEEEEEECC---EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHC------
T ss_conf             7763999970884036753088---7997306878545874777668889899999998179998999999835------


Q ss_pred             CCCCCCHHHCC--HHHHHHHHHHCCCCCHHHHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECC-CCCCHHHHHHHHHHC
Q ss_conf             78876855559--899999997303899899999--9999999999999733578668999778-844289999999966
Q batch____       237 APKSTGREYFN--YGWLERHLRHFPGVDPRDVQA--TLAELTAVTISEQVLLSGGCERLMVCGG-GSRNPLLMARLAALL  311 (369)
Q Consensus       237 pPKStGRE~F~--~~~l~~~l~~~~~ls~~D~~a--Tlt~~TA~sI~~~~~~~~~~~~v~v~GG-Ga~N~~Lm~~L~~~l  311 (369)
                        ||--.-+=+  -.=++...+....-.++-.+|  -.+.-.+..|....-.-+++|-|+.+|| |-+.+.+.+++-+.|
T Consensus       270 --~sGLlg~sgg~S~D~Rei~~~~~~Gd~~A~la~d~f~yri~k~IGa~aa~LgGvDaiVfTGGIGEns~~iR~~i~~~l  347 (400)
T c2iirJ_         270 --KSGVYGLSKGFSSDMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAMNGVDAIVFTAGVGENSPITREDVCSYL  347 (400)
T ss_dssp             --SCHHHHHTTTSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred             --CCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf             --788244426765228999998876999999999999999999999999871795699972743677189999998622


Done!