15 c1ynuA_ Probab=100.00  E-value=0  Score=359.73  Aligned_columns=370  Identities=16%

Q ss_pred             CCCCCCCHHHHHHHHHHHCC------CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC----------CCCCC
Q ss_conf             64478785899999986078------998466232654389998887368999999986072436----------67899
Q batch____         5 VDAYAGDPILTLMERFKEDP------RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGA----------SLYLP   68 (397)
Q Consensus         5 ~~~~~~~~i~~l~~~~~~d~------~~~~i~l~~g~~~~~~~~~~~~~av~~a~~~~~~~~~~~----------~~Y~~   68 (397)
                      +.+...++-+.--+++..++      .+..|||++|.      +....+.+......-.......          ++|++
T Consensus         1 ~~~~~~s~y~~~~~~~~~~~y~~~~n~~g~i~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~   74 (417)
T c1ynuA_           1 LSRNATSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAE------NQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQD   74 (417)
T ss_dssp             CCTTTCCHHHHHHHHHHHSBCBTTTBTTSBEECSSCC------CCTTHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCC
T ss_pred             CCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9887898046537753278365555768858886788------7766211726642103799999755322444407998


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHC-CCCEEE
Q ss_conf             8899899999999997627888882127899706837999999999985189978998589845589999961-675686
Q batch____        69 MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGA-GFEVST  147 (397)
Q Consensus        69 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~v~~T~G~~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~-g~~~~~  147 (397)
                      +.|.++||+++++|+.++++..++-+...|++|+|+++|+.+++.++  ++|||+|++++|+|+.|...++.. |.+++.
T Consensus        75 ~~G~~~lr~aia~~l~~~~~~~~~~~~e~I~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~g~~~v~  152 (417)
T c1ynuA_          75 YHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCL--ADPGEAVLIPTPYYPGFDRDLKWRTGVEIVP  152 (417)
T ss_dssp             TTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHH--CCTTCEEEEESSCCTTHHHHTTTTTCCEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHH--CCCCCEEEEECCCCHHHHHHHHHHCCCEEEE
T ss_conf             67998999999999998608999888556788088899999999985--3789889985897278899999818984999


Q ss_pred             EEECCCCCCCCCHHHHHHHHHH---HCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
Q ss_conf             2411688886797899999874---0188199984789887100143899999999997559159976351210158754
Q batch____       148 YPWYDEATNGVRFNDLLATLKT---LPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEE  224 (397)
Q Consensus       148 v~~~~~~~~~~~~~~~~~~l~~---~~~~~~~i~~~~~~NPTG~~~s~~~l~~i~~~a~~~~~~ii~Deay~~~~~~~~~  224 (397)
                      +++.++++|++|++.+++.+.+   ...++.++++++||||||.+++.+++++|+++|++|+++||+||+|.++.++...
T Consensus       153 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~~~iI~De~y~~l~~~~~~  232 (417)
T c1ynuA_         153 IHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS  232 (417)
T ss_dssp             ECCCGGGTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSC
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCC
T ss_conf             74384224466988999999743321698089994257888414325999999999987559189996787200028877


Q ss_pred             CCC--HHHHCCCCCCCEEEEECCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf             430--367512458828997126300157201103463074548999999999886300344677989999999996297
Q batch____       225 DAY--AIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDE  302 (397)
Q Consensus       225 ~~~--s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  302 (397)
                      ...  ++....+..+++++++||||.|++||+|+||++++............        .....+...|.++...+.+ 
T Consensus       233 ~~s~~~~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~i~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~l~~-  303 (417)
T c1ynuA_         233 FISVMEVLKDSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS--------SFGLVSSQTQHLLSAMLSD-  303 (417)
T ss_dssp             CCCHHHHTTCCCGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHH--------TTSCCCHHHHHHHHHHTTC-
T ss_pred             CCCHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHEEEEECHHHHHHHHHHHH--------HCCCCCCHHHHHHHHHHCC-
T ss_conf             7884664311566898899940605520340321268748689999999873--------1036888899999985226-


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCH-----------HHHHHHHHHCCEEEE
Q ss_conf             657889999999999999999999999997088788699715973088628998-----------999999984790981
Q batch____       303 ALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLI  371 (397)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~g~f~~~~l~~-----------~~~~~Ll~e~~I~~~  371 (397)
                        .....+++++++++++.+++.+.+.|++.+    +.+.++++|||+|++++.           +++++|++++||.+.
T Consensus       304 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g----~~~~~p~~g~~~~i~l~~~~~~~~~~~~~~~~~~ll~e~gV~v~  377 (417)
T c1ynuA_         304 --KKLTKNYIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNIS  377 (417)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTTCEECE
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEE
T ss_conf             --104899999999998999999999976279----88946886128998775324654445789999999997596998


Q ss_pred             CC----------CEEEECCCCHHHHHHHHHHHHHHC
Q ss_conf             88----------059850689999999999988719
Q batch____       372 AS----------GRMCVAGLNTANVQRVAKAFAAVM  397 (397)
Q Consensus       372 pg----------~Ris~a~l~~~~i~~l~~ai~~vv  397 (397)
                      ||          +|||++.++++.++...++|++++
T Consensus       378 pg~~f~~~~~g~iRis~a~~~~~~l~~al~rl~~~l  413 (417)
T c1ynuA_         378 PGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFV  413 (417)
T ss_dssp             ETTTTTCSSTTEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             ECHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             072208789877999746899999999999999973