12 c3pvsA_ Probab=99.72   E-value=2e-15  Score=103.11  Aligned_columns=187  Identities=18%

Q ss_pred             HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99999826557626999779987888999999985575654999806988899999999976406678774679999999
Q batch____         8 ILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQ   87 (489)
Q Consensus         8 ll~~L~~~~~~~r~v~LtGe~GtGKTtlar~L~~~l~~~~~~~~~i~~~~~~~~~ll~~l~~~~~~~~~~~~~l~~~l~~   87 (489)
                      .+..+++...-..++ |+||+||||||+++.+++.++..+..+...........+++...                    
T Consensus        27 ~L~~~i~~~~~~slI-L~GppGtGKTtlA~~iA~~~~~~fi~ina~~~~v~~ir~ii~~a--------------------   85 (414)
T c3pvsA_          27 PLPRAIEAGHLHSMI-LWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERA--------------------   85 (414)
T ss_dssp             HHHHHHHHTCCCEEE-EECSTTSSHHHHHHHHHHHTTCEEEEEETTTCCHHHHHHHHHHH--------------------
T ss_pred             HHHHHHHCCCCCEEE-EECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH--------------------
T ss_conf             999999759998499-97698898899999999971998999975447989999999998--------------------


Q ss_pred             HHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCC--HHHHHHCCCCCEEECCCCCHHHHHHH
Q ss_conf             9999986189808999540563999999999987315878806999724530--00222103571478278999999999
Q batch____        88 LLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRK--VERDFKKQGIELVSIGRLTEHELKAS  165 (489)
Q Consensus        88 ~L~~~~~~g~r~~llIiDea~~l~~~vLe~Lr~L~n~~~~~~iiLig~~e~~--l~~~~l~~~~~ri~L~pL~~~E~~~y  165 (489)
                         .......+..++++||+|.+.        ++..++.+..+++....+..  ...+.+.+..+.+.+.+++.+++..+
T Consensus        86 ---~~~~~~~~~~ILfIDEi~rla--------LL~~lE~~~iilI~aTten~~~~i~~aL~SR~~vi~l~~ls~edi~~i  154 (414)
T c3pvsA_          86 ---RQNRNAGRRTILFVDEVHRFA--------FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQV  154 (414)
T ss_dssp             ---HHHHHTTCCEEEEEETTTCCC--------CHHHHHTTSCEEEEEESSCGGGSSCHHHHTTEEEEECCCCCHHHHHHH
T ss_pred             ---HHHHHCCCCCEEEEECHHHHH--------HHHHHHCCCEEEEEEECCCCHHHCCHHHHHHEEEEEECCCCHHHHHHH
T ss_conf             ---751112588089984135766--------578754498489998267604416988883000677168998999999


Q ss_pred             HHHHHHHC-----CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC--CCCCCHHHHHHHH
Q ss_conf             99998504-----8877899899999999958867999999999998640245--5478999999999
Q batch____       166 ILEGQNID-----QPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQ--TSVFTAKQWRMIY  226 (489)
Q Consensus       166 I~~rl~~~-----~~~~~fs~~ai~~I~~~S~G~PR~In~l~d~al~~a~~~~--~~~i~~~~v~~a~  226 (489)
                      +.+.+...     .....+++++++.|+++|+|+.|.+-.+++.+...+..+.  ...|+.+.++...
T Consensus       155 l~~~l~~~~~~~~~~~i~i~d~al~~Ia~~s~GD~R~aLn~LE~a~~~a~~~~~~~~~i~~~~v~~~~  222 (414)
T c3pvsA_         155 LTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA  222 (414)
T ss_dssp             HHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCBCTTSCEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHH
T ss_conf             99999999987087898669899999998579998999999999999514667665548999999986