59 c1s3sA_ Probab=99.41   E-value=1.5e-10  Score=76.23  Aligned_columns=205  Identities=16%

Q ss_pred             CCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf             97389999999982-----------6557626999779987888999999985575654999806988899999999976
Q batch____         1 MSTRREVILSWLCE-----------KRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNA   69 (489)
Q Consensus         1 ~~~~~~~ll~~L~~-----------~~~~~r~v~LtGe~GtGKTtlar~L~~~l~~~~~~~~~i~~~~~~~~~ll~~l~~   69 (489)
                      |....+.+-+.+..           .....+-++|+||+|||||++++.+++++..++..+        +..++.     
T Consensus       187 l~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~~~~~~i--------~~~~l~-----  253 (436)
T c1s3sA_         187 CRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLI--------NGPEIM-----  253 (436)
T ss_dssp             CHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHHTCEEEEE--------EHHHHH-----
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEE--------EHHHHC-----
T ss_conf             4999999999999750188989748899875389867998997899999987449958997--------306870-----


Q ss_pred             HCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH------------CCHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             4066787746799999999999986189808999540563------------9999999999873158788069997245
Q batch____        70 AEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHL------------NHRRILDDLQRAISLIPDGQFLLIGRPD  137 (489)
Q Consensus        70 ~~~~~~~~~~~l~~~l~~~L~~~~~~g~r~~llIiDea~~------------l~~~vLe~Lr~L~n~~~~~~iiLig~~e  137 (489)
                           ..........+...+.......  +.++++|+.|.            ...-+...+..+-+......+++++...
T Consensus       254 -----~~~~g~~e~~l~~~f~~a~~~~--p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vi~tt~  326 (436)
T c1s3sA_         254 -----SKLAGESESNLRKAFEEAEKNA--PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATN  326 (436)
T ss_dssp             -----TSCTTHHHHHHHHHHHHHHHTC--SEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCCGGGCEEEEEEES
T ss_pred             -----CCCCCHHHHHHHHHHHHHHHCC--CCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
T ss_conf             -----0100158888999999997509--948984000032102578874588999999986430222469879998448


Q ss_pred             CCHHHHHHCC----CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHCCC
Q ss_conf             3000222103----5714782789999999999999850488778998999999999588-6799999999999864024
Q batch____       138 RKVERDFKKQ----GIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRG-DRRKLALAGETIRLLQQAE  212 (489)
Q Consensus       138 ~~l~~~~l~~----~~~ri~L~pL~~~E~~~yI~~rl~~~~~~~~fs~~ai~~I~~~S~G-~PR~In~l~d~al~~a~~~  212 (489)
                      .....+.-..    +...|.+++.+.++-.+++...+........++   +..|++.+.| .|..|..+|++|.+.+..+
T Consensus       327 ~~~~l~~~l~r~~rf~~~i~~~~P~~~~R~~Il~~~~~~~~l~~d~~---~~~la~~t~g~~~~dl~~l~~~a~~~a~~r  403 (436)
T c1s3sA_         327 RPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD---LEQVANETHGHVGADLAALCSEAALQAIRK  403 (436)
T ss_dssp             CGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSEECTTCC---HHHHHTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC---HHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             95888824204240303666789899999999999843898988668---788998768998899999999999999998


Q ss_pred             -----------------CCCCCCHHHHHHHHHH
Q ss_conf             -----------------5547899999999985
Q batch____       213 -----------------QTSVFTAKQWRMIYRI  228 (489)
Q Consensus       213 -----------------~~~~i~~~~v~~a~~~  228 (489)
                                       ....|.-+....|++.
T Consensus       404 ~~~~~~~~~~~~~~~~~~~~~v~~~df~~al~~  436 (436)
T c1s3sA_         404 KMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ  436 (436)
T ss_dssp             HTTTTTCSSCCCBHHHHHHCEECHHHHHHHHCC
T ss_pred             HHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHC
T ss_conf             886402002103876673010169989988609