340 c1gm5A_ Probab=97.26   E-value=0.0017  Score=37.49  Aligned_columns=111  Identities=16%

Q ss_pred             CCHHHHHHHHHHHHCCCCCCE--EEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC----
Q ss_conf             973899999999826557626--99977998788899999998557565499980698889999999997640667----
Q batch____         1 MSTRREVILSWLCEKRQTWRL--CYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGC----   74 (489)
Q Consensus         1 ~~~~~~~ll~~L~~~~~~~r~--v~LtGe~GtGKTtlar~L~~~l~~~~~~~~~i~~~~~~~~~ll~~l~~~~~~~----   74 (489)
                      ||.-|+..++-....-.....  .+|.|++|+|||.++-..+-..-..+..+.++.-...-+.+....+...+...    
T Consensus       363 LT~~Q~~ai~eI~~dl~~~~~m~rLLqgdtGSGKT~Va~lail~ai~~G~qvlilaPTr~LA~Q~~~~l~~~~~~~gi~V  442 (729)
T c1gm5A_         363 LTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHV  442 (729)
T ss_dssp             CCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCE
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             89899999999999863589730677504787215899999999996598099990769999999999999604159749


Q ss_pred             -----CCCHHHHHHHHHHH-------------HHHHHHHCCCEEEEEECCHHHCC
Q ss_conf             -----87746799999999-------------99998618980899954056399
Q batch____        75 -----RDSAWTRDEMAGQL-------------LHALHRTDSRCPLIIIENAHLNH  111 (489)
Q Consensus        75 -----~~~~~~l~~~l~~~-------------L~~~~~~g~r~~llIiDea~~l~  111 (489)
                           ..+.......+...             ++.....-.+.-++|+||+|.+.
T Consensus       443 ~lltG~~~~~~r~~~~~~i~~g~~~IvVgT~~lL~~~v~~~~l~lvVIDEaHrf~  497 (729)
T c1gm5A_         443 ALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFE  497 (729)
T ss_dssp             EECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEEEESCCCCC
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCEEECCCHHHHH
T ss_conf             9998899888999999865037974898517788730141136678606168889