42 d1juba_ Probab=99.41   E-value=1.2e-13  Score=125.35  Aligned_columns=271  Identities=20%

Q ss_pred             HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEECCC
Q ss_conf             01135204354571279999999998388213888888877803223550688733655789779579220278660478
Q batch____       857 RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGA  936 (1486)
Q Consensus       857 rF~tg~MS~Gals~~a~~ala~a~~~~g~~s~tGEGGe~p~~~~~~~~~~i~QvASGrFGv~~~~l~~a~~ieIK~aQGA  936 (1486)
                      ||..++|.++.....+-........-+..++.+-|..+............-.-...|..-...++......-..|..-..
T Consensus        14 Pi~~a~~~~~~~~~~~~~~~~~g~g~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (311)
T d1juba_          14 PFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQE   93 (311)
T ss_dssp             SEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSS
T ss_pred             CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             67877778879989999999659988983244811001783435555311230014577166899999999999862789


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCC-----CCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
Q ss_conf             89867828811278788987089-----999888986887-----75034999999999998478987168897410786
Q batch____       937 KPGEGGQLPGDKVTPYIAKLRYS-----VPGVTLISPPPH-----HDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGV 1006 (1486)
Q Consensus       937 KPGeGG~Lpg~KV~~~IA~~R~~-----~pgv~liSPpph-----HdiYSIEDlaqlI~~Lk~~n~~a~v~VKlv~~~gv 1006 (1486)
                      +| .+.++.+.+..++...+|..     ..++.+.--.||     .-.++-+.+.+.+.+++...+.+ |.+|++.....
T Consensus        94 ~p-i~~~i~~~~~~~~~~~~~~~~~~~~a~~i~in~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~p-v~~k~~~~~~~  171 (311)
T d1juba_          94 GP-IFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKP-LGVKLPPYFDL  171 (311)
T ss_dssp             SC-CEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSC-EEEEECCCCSH
T ss_pred             CE-EEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCC-EEECCCCCCCC
T ss_conf             46-99971689989999999876523589877337866554320032049899999999999722894-11010477764


Q ss_pred             ---CEEEEEEEECCCCEEEEECCCCCCCH----------HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE
Q ss_conf             ---23899997146878999469887504----------57888750787152346999999998189655799983803
Q batch____      1007 ---GTIATGVAKAYADLITIAGYDGGTGA----------SPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGL 1073 (1486)
Q Consensus      1007 ---gtia~gvaka~ad~i~IsG~dGGTGA----------a~~~s~k~~G~P~e~gl~e~~~~L~~~glR~~v~l~~dGg~ 1073 (1486)
                         ...+.-..++++|.|.++++.|.+..          .+..+..+.+.+|...++..........++.++++++|||+
T Consensus       172 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~a~~~~~~~~~~~~~~ipii~~GGI  251 (311)
T d1juba_         172 VHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGI  251 (311)
T ss_dssp             HHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSC
T ss_pred             CCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             00299998887379869997088653210223210000133444566464110468999999988850789669994787


Q ss_pred             CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             49999999986288624045799999978974004587897014527866764204771789999999999999999998
Q batch____      1074 KTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQ 1153 (1486)
Q Consensus      1074 ~t~~dv~~a~~LGA~~~~~gt~~lia~GCim~r~Ch~~~CpvGiaTq~~~l~~~~~~g~~~~vv~~~~~~~~e~r~i~a~ 1153 (1486)
                      +++.||+++++||||.|.+||+.|.                                    +-+..+.-+-+|++.+|+.
T Consensus       252 ~~~~dv~k~l~lGAdaV~igta~~~------------------------------------~g~~~~~~i~~eL~~~m~~  295 (311)
T d1juba_         252 ETGQDAFEHLLCGATMLQIGTALHK------------------------------------EGPAIFDRIIKELEEIMNQ  295 (311)
T ss_dssp             CSHHHHHHHHHHTCSEEEECHHHHH------------------------------------HCTHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCEEEECHHHHH------------------------------------CCHHHHHHHHHHHHHHHHH
T ss_conf             9999999999729989999278885------------------------------------2589999999999999998


Q ss_pred             HCCCHHHHHCCC
Q ss_conf             252116664054
Q batch____      1154 LGVTRLVDLIGR 1165 (1486)
Q Consensus      1154 lG~~s~~e~vGr 1165 (1486)
                      +|++|++|++|+
T Consensus       296 ~G~~si~el~G~  307 (311)
T d1juba_         296 KGYQSIADFHGK  307 (311)
T ss_dssp             HTCCSGGGTTTC
T ss_pred             CCCCCHHHHHHH
T ss_conf             289978899864