BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (434 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P45546 Uncharacterized protein yhfT n=59 Tax=Bacteria R... 860 0.0 UniRef50_B9CM77 Putative membrane protein n=1 Tax=Atopobium rima... 374 e-102 UniRef50_B4V1N7 ABC-type transport system protein n=4 Tax=Strept... 302 1e-80 UniRef50_A1JNH1 Putative membrane protein n=2 Tax=Yersinia RepID... 270 7e-71 UniRef50_D0GNT3 Transporter permease n=5 Tax=Bacteria RepID=D0GN... 254 6e-66 UniRef50_C9A351 Putative uncharacterized protein n=1 Tax=Enteroc... 235 3e-60 UniRef50_UPI0001C35377 putative transport system permease protei... 222 2e-56 UniRef50_Q9KF96 BH0589 protein n=6 Tax=Bacteria RepID=Q9KF96_BACHD 219 1e-55 UniRef50_Q03C35 Uncharacterized conserved membrane protein n=9 T... 179 3e-43 UniRef50_B9Y6L9 Putative uncharacterized protein n=1 Tax=Holdema... 176 1e-42 >UniRef50_P45546 Uncharacterized protein yhfT n=59 Tax=Bacteria RepID=YHFT_ECOLI Length = 434 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/434 (100%), Positives = 434/434 (100%) Query: 1 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF 60 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF Sbjct: 1 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF 60 Query: 61 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT 120 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT Sbjct: 61 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT 120 Query: 121 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN 180 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN Sbjct: 121 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN 180 Query: 181 PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA 240 PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA Sbjct: 181 PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA 240 Query: 241 AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT 300 AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT Sbjct: 241 AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT 300 Query: 301 GVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR 360 GVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR Sbjct: 301 GVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR 360 Query: 361 NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI 420 NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI Sbjct: 361 NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI 420 Query: 421 LLNVLYWLGLFVPA 434 LLNVLYWLGLFVPA Sbjct: 421 LLNVLYWLGLFVPA 434 >UniRef50_B9CM77 Putative membrane protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM77_9ACTN Length = 442 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 204/436 (46%), Positives = 292/436 (66%), Gaps = 14/436 (3%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 + +I++ + +T+LL+H AVF+DG+RP +P+ +EG M R E FGL IGF+ASV Sbjct: 6 LSVILIGAVCAVTALLSHMGVAVFNDGVRPFVPEFLEGRMPRPEYALAVFGLCIGFIASV 65 Query: 65 GISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPV 124 GI L T LLN WLLFL TDI+G N A GA+WGVL L L +N LT LPV Sbjct: 66 GIGNALATNLLNPWLLFLATDIIGAFCPNKWSAAIAGAVWGVLCLVSLGGINTALTFLPV 125 Query: 125 DVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVV--VVRYFP---HL 179 D+LGSLG+L + +V+ FALFP++AI QFGWK+ ++ AV+ ++ R+ + ++ P + Sbjct: 126 DLLGSLGQLGTYIVTGFALFPVLAITMQFGWKRGVVTAVLAILARIFGPMWKFGPSKASI 185 Query: 180 NPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALI 239 + ++ + +G+++L G AI DL ++ E + + G ++F ER +RI KN+P++ + GALI Sbjct: 186 SADAWMLLVGVILLFGFAIAQDLSNKGEKNGEFEG-NLFSERVARIRKNVPFLMVGGALI 244 Query: 240 AAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALA 299 A + ++ +FAGS VS+F+L AY + LI AA+ E RGL F+PLIA TA+ Sbjct: 245 AVICNLHLFAGSTVSMFSLADAYHGAANASE---LIQSAAVNELFRGLSFIPLIAVTAIT 301 Query: 300 TGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNI 359 TGVY VAGFTF+Y YL+PNP VAA+LGA++I EV+LL IGK LGR+PS+R+A+DNI Sbjct: 302 TGVYGVAGFTFIYVAGYLAPNPFVAAILGALIIFVEVMLLGFIGKQLGRFPSLRDAADNI 361 Query: 360 RNAMNMLMEVALLVGSIFAAIKMAGYTG-----FSIAVAIYFLNESLGRPVQKMAAPVVA 414 R+AM +E A+L GS+ A I M G F+IA A Y+LNE GR + +MA V Sbjct: 362 RSAMGTCVEFAVLFGSLNAVIAMGTKIGNPALAFAIAAAAYYLNEVTGRKIMRMAIGPVF 421 Query: 415 VMITGILLNVLYWLGL 430 ++TGI+LN+LY++GL Sbjct: 422 ALVTGIILNLLYFVGL 437 >UniRef50_B4V1N7 ABC-type transport system protein n=4 Tax=Streptomyces RepID=B4V1N7_9ACTO Length = 433 Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 182/439 (41%), Positives = 262/439 (59%), Gaps = 25/439 (5%) Query: 8 IVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGIS 67 ++V + +T+ AH + AVF+DG+RP + I G R G+++FGLS GFV +G Sbjct: 1 MLVVGVCALTAGAAHMALAVFNDGVRPFMLDFIHGRATRNATGAVSFGLSAGFVFGLGAP 60 Query: 68 FTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVL 127 L TG+LN WLLFLPTD+LG+LA +A LGA WG +++ L N+L LPVD L Sbjct: 61 MALSTGVLNPWLLFLPTDVLGILAPRRWLAPLLGAAWGAVVVYGLGGANELAHGLPVDFL 120 Query: 128 GSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIF 187 ++ ++S+P++ FALFP +A+ QFG + + V L V+ +R +P + + + Sbjct: 121 TAMRQMSTPILFLFALFPALAVTKQFGRLRGALTGAVTLGLVVLTMRVWPGVFAGAPAMA 180 Query: 188 IGMVMLLGIAITHDLRH-RDENDIDASGL------------SVFEERTSRIIKNLPYIAI 234 +G++ML+G A+ D+R R + A G S+F +R+ ++LP Sbjct: 181 VGVLMLIGFAVAADVRTARASGTVAAEGAGGVGPSAEDPMASLFSSGAARLRRHLPLFMA 240 Query: 235 VGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIA 294 +GA + A+A MK+F G E + F + K A +AA +F R GF+PLIA Sbjct: 241 LGAGVCALAQMKVFGGGEATSFLIAKGQYA------------EAAQVDFYRVFGFLPLIA 288 Query: 295 TTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRN 354 TTALA+G Y +AGFT VY + YL PNP VAA +GA+V + EVL L SIG LGR PSVR+ Sbjct: 289 TTALASGAYGIAGFTLVYPIGYLLPNPFVAAAVGALVFALEVLALSSIGGALGRLPSVRD 348 Query: 355 ASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVA 414 S+++R A+ + +A+L GS+ AA M G G I +Y LNE++GRPV +MAA A Sbjct: 349 CSEHLRAAIGDALGLAILFGSLMAANAMGGGLGILICGGLYLLNEAMGRPVVRMAAAPAA 408 Query: 415 VMITGILLNVLYWLGLFVP 433 V+ G+ LN LYWLGLF P Sbjct: 409 VLAGGVALNGLYWLGLFTP 427 >UniRef50_A1JNH1 Putative membrane protein n=2 Tax=Yersinia RepID=A1JNH1_YERE8 Length = 427 Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 163/439 (37%), Positives = 252/439 (57%), Gaps = 27/439 (6%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 ++II+ + + G + LA++S AV+HDG+RPI+P+ + G M+R+E I+F +SIGF+ Sbjct: 7 VKIILFSLMGGYATFLANKSIAVYHDGLRPIMPEFMNGNMSRKELAGISFAISIGFITGF 66 Query: 65 GISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPV 124 + TL TG++ ++ L DI+GV N+ +A +G ++G LI L + + + LPV Sbjct: 67 AMPITLATGIIVIHIVLLTADIIGVSLNNTKLAVLIGTVYGALITIALDGLIKGFSYLPV 126 Query: 125 DVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFP------- 177 + L +L + P++ AF FP +A+ YQFG K LI ++ + RVV+ R P Sbjct: 127 NFLDALASVGDPIIYAFVAFPAIAVGYQFGKKAGLITIIIAFLARVVIERINPVTIAGNE 186 Query: 178 -HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVG 236 L+PE I + GM+ LL A + D RH +E + S+F++ RI KN Y+ + Sbjct: 187 VALSPEGIAMLFGMICLLFFA-SRDKRHGEEIE-----HSLFDDNIKRIRKNAIYLLPMA 240 Query: 237 ALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATT 296 ALI A AG ++ L K I AA+ ++ L F+PLI TT Sbjct: 241 ALITITAHYHWIAGEPIAAALLGKGQ------------ITSAAIVAIVQALAFMPLIITT 288 Query: 297 ALATGVYAVAGFT-FVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNA 355 A+ +GVY G+ + + YL+PNP+VA +LGA + E+ L IGK + R+PS++ + Sbjct: 289 AMISGVYGTNGWCDWFLGLGYLAPNPVVAGILGAGAMGVEITSLSRIGKAMNRFPSLKMS 348 Query: 356 SDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAV 415 DNIR AM ++E+ALLVG + AA ++ TG + V++Y LNE GRPV K+AA +A Sbjct: 349 GDNIRTAMTQILEIALLVGGVNAANQIWPGTGIFVVVSLYILNEICGRPVMKLAAGPIAA 408 Query: 416 MITGILLNVLYWLGLFVPA 434 ++ GIL N+ LGL V A Sbjct: 409 IVVGILANIFAVLGLHVVA 427 >UniRef50_D0GNT3 Transporter permease n=5 Tax=Bacteria RepID=D0GNT3_9FUSO Length = 445 Score = 254 bits (648), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 152/442 (34%), Positives = 252/442 (57%), Gaps = 20/442 (4%) Query: 6 QIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVG 65 + ++ A L+G S+LA+ AVF+DG+RP++P+ +EG M+R+ + +F LS G V G Sbjct: 3 KFLISALLSGFASILANLGVAVFNDGLRPMMPEFLEGRMDRKALAATSFALSFGLVIGFG 62 Query: 66 ISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGL----GAIWGVLILTCLLPVNQLLTA 121 I F++ + ++ + L TDI+G + + L GA++GV ++ L V + Sbjct: 63 IPFSIGSTIILIHSILLGTDIIGTSTPRNNVGLALAGIIGALYGVGLVYGLEIVINIFQK 122 Query: 122 LPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRY--FP-- 177 +P+D L SL ++ +P++ FA+FP + + YQ+G K+ +V L+ R +V + P Sbjct: 123 MPIDFLPSLAKVGAPIIVGFAVFPALVVGYQYGTKKGAFTLIVTLLVRQIVAVFGKIPVA 182 Query: 178 -----HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYI 232 LNP+ + + + +V++L AI + ++ + + + +F R +R+ KN+ + Sbjct: 183 EKVSITLNPDGMALLVSVVIMLIFAIFD--KETEKTNSNEMLVGIFSARVARVKKNIIPL 240 Query: 233 AIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPL 292 +I+G LIAA S+++ AG +S+ L + +A L R +GFVPL Sbjct: 241 SIMGGLIAAACSLRVVAGDPISLKLLASTLKDTAGGDAKNF---EAGLVALARSIGFVPL 297 Query: 293 IATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSV 352 +ATTA+ TGVY AG T V+ V NP+++ VLGA +++ E+LLL I K L R+P V Sbjct: 298 VATTAITTGVYGPAGMTLVFVVGIFVKNPIISFVLGAAILAVEILLLELIAKSLDRFPGV 357 Query: 353 RNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYT--GFSIAVAIYFLNESLGRPVQKMAA 410 + D IR AM ++EV+LLVG + AA +MAG GF Y LN++ +P+ MA Sbjct: 358 KACGDQIRTAMTKVLEVSLLVGGMIAANEMAGSNGLGFLFVSGFYLLNKTSKKPLVDMAV 417 Query: 411 PVVAVMITGILLNVLYWLGLFV 432 VA ++ GI+LN+LY L L+V Sbjct: 418 GPVATILFGIILNILYLLHLYV 439 >UniRef50_C9A351 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A351_ENTGA Length = 438 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 149/443 (33%), Positives = 257/443 (58%), Gaps = 29/443 (6%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 I+++ +A L G+ ++LA++ AVF+DG+RPI+P+ +EG + ++E + +F LS G V Sbjct: 7 IELVAIALLGGICAVLANKGIAVFNDGLRPIVPEFLEGKIGKKEIAATSFALSFGLVIGF 66 Query: 65 GISFTLKTGLLNAWLLFLPTDILGVLAINS----LMAFGLGAIWGVLILTCLLPVNQLLT 120 GI ++ +L + L TDI+G A +++ +GA++G+ ++ L V L Sbjct: 67 GIPVSIGASILLVHSVLLMTDIIGSWAPEGKSGIIISAIIGAMYGIGLVLGLQAVVDLFA 126 Query: 121 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPH-- 178 +PV+ + SL + +PVV +F++FP VAI Q G+K+ I+ L+T V R+ Sbjct: 127 MMPVNFMDSLSMVGTPVVISFSIFPAVAIASQHGFKKGAISFAATLLTLFAVKRFGTFDL 186 Query: 179 -------LNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPY 231 L+ E + + +GM+ ++ AI D ++ + S +SVF ER +RI KN + Sbjct: 187 GNGTSLTLSAEGMSLLVGMIFMIVYAIQ---VKSDGSNSNESLVSVFLERVNRIKKNWAW 243 Query: 232 IAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVP 291 +A+ G L++A S+ I AG +S+ L S+ ++A LA F RG+GF+P Sbjct: 244 LAVTGGLVSAATSLMIIAGDPISLNLL------------SEGKFSEAGLAAFARGIGFIP 291 Query: 292 LIATTALATGVYAVAGFTFVYAVD-YLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYP 350 L+ +TA+ TGVY+ AG TFV+ L NP++A ++G+ ++ EV LL + K L ++P Sbjct: 292 LVFSTAIVTGVYSPAGTTFVFVAGILLHDNPIMAFIVGSALMFIEVQLLSLMAKALDKFP 351 Query: 351 SVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAA 410 +R ++IR AMN ++EVALL+G A+ ++A G+ + + LN +PV ++A Sbjct: 352 GIREMGEHIRTAMNKVLEVALLIGGAMASEQIAPGIGYFWVIGLMLLNRKAKKPVVELAV 411 Query: 411 PVVAVMITGILLNVLYWLGLFVP 433 +A + G+++N+LY +GLF P Sbjct: 412 GPIAAISLGVIVNILYLVGLFAP 434 >UniRef50_UPI0001C35377 putative transport system permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35377 Length = 426 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 148/442 (33%), Positives = 240/442 (54%), Gaps = 33/442 (7%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 ++ IV+ +LLA+R AVF+D +RP++P+ EG M R E + F LS G V Sbjct: 1 MRYIVIFLAGAFGALLANRGIAVFNDAVRPVVPEYREGRMTRLEFATTTFALSFGLVIGF 60 Query: 65 GISFTLKTGLLNAWLLFLPTDILGV-----------LAINSLMAFGL----GAIWGVLIL 109 GI +++ + ++ L+L TD++G+ L SL+ GL G ++GVL+L Sbjct: 61 GIPYSIMSPIILVHSLWLGTDVIGIFFPAKNIEKWYLDKESLIGAGLSVLAGGLYGVLLL 120 Query: 110 TCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTR 169 L ++ ALPV++ + +S PV+SAF FP V I +GWK+ L++ VV ++ R Sbjct: 121 AGLQSFVNMMQALPVNIFDAWQNISGPVISAFIAFPCVVITMDYGWKKGLVSLVVSVLLR 180 Query: 170 VVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNL 229 ++V + + + + G+V ++ A+ RD+++ + S+F +R I KN+ Sbjct: 181 QIMVFFGKGDIADGVALLTGLVFIIVFAV------RDKSESTGNLASIFGDRVKNIRKNI 234 Query: 230 PYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGF 289 +IAI+GA+ +M + S+ L+ ++ A F R L F Sbjct: 235 IWIAIMGAIYGLACNMHLLMEGPQSLVALKDGN------------VSSAVSISFARALSF 282 Query: 290 VPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRY 349 +PL A T+L TG + GF F L+PN ++AAV GAVV+S E L L + K + Sbjct: 283 IPLKALTSLTTGTFVTDGFGFTATAGLLAPNGVLAAVFGAVVMSLEALSLAVVAKLFDKV 342 Query: 350 PSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMA 409 PS++ ++D+IR AM L+EVA+LVGS+ AA MA GF + + +NE +P+ +MA Sbjct: 343 PSIKKSADSIRVAMTRLLEVAILVGSMSAAEGMAPGFGFLVVGGFFVMNEYFKKPIVRMA 402 Query: 410 APVVAVMITGILLNVLYWLGLF 431 +AV+ G+L+NVL LGL+ Sbjct: 403 VGPIAVIAVGVLVNVLAVLGLY 424 >UniRef50_Q9KF96 BH0589 protein n=6 Tax=Bacteria RepID=Q9KF96_BACHD Length = 429 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 142/433 (32%), Positives = 242/433 (55%), Gaps = 35/433 (8%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 ++I+++ C+ + +++A+ AVF+DGIRPI+P+ +EG M R+E G AF +S G V Sbjct: 2 LEIMLMVCIGALAAVMANLGIAVFNDGIRPIVPENLEGRMTRKELGVTAFAMSFGLVIGF 61 Query: 65 GISFTLKTGLLNAWLLFLPTDILGVL----AINSLMAFGLGAIWGVLILTCLLPVNQLLT 120 GI ++ ++ + L +DI+G+ + + +A +G ++G I L V L T Sbjct: 62 GIPISIAGSIILIHSILLGSDIIGLALDRGKVKTTIAAIIGGLYGAGIYMGLQVVVDLFT 121 Query: 121 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPH-- 178 LP++ + + ++ PVV +F +FP +AI QFG K+ +IA + R ++V F + Sbjct: 122 MLPLNFVDAFNKVGDPVVVSFMVFPAIAIALQFGVKKGIIAFAIAAFARQLIV--FTNGA 179 Query: 179 -----------LNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIK 227 L+PE I + +GM +L+ A +R + E ++ ++F +R +RI K Sbjct: 180 ELIKIGSTPVVLSPEGIALVVGMFLLIFFA----MREKSEETNLSTLATLFTDRVARIKK 235 Query: 228 NLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGL 287 + + + G L+AA ++ + AG +S+ L ++ +++ +A + + Sbjct: 236 HRWILMLSGGLVAAATNLLLIAGDPISLNLL------------AEGKMSEGGIAALAKAI 283 Query: 288 GFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLG 347 GFVPLIA+TA+ATGVY GFTFV+A +PN +A ++GA++I E+ LL + +L Sbjct: 284 GFVPLIASTAIATGVYGPIGFTFVFAAGIFAPNLGIALLIGALIIFLEIQLLTKLATFLD 343 Query: 348 RYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQK 407 RYP +R + +NIR AM+ ++EVALL+G AA + GF Y +NE GRP+ + Sbjct: 344 RYPGIRASGENIRTAMSRVLEVALLIGGANAADAIVPGFGFFAIAGFYLINEIAGRPIVR 403 Query: 408 MAAPVVAVMITGI 420 MA V +I GI Sbjct: 404 MAIGPVGAIIVGI 416 >UniRef50_Q03C35 Uncharacterized conserved membrane protein n=9 Tax=Firmicutes RepID=Q03C35_LACC3 Length = 431 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 139/447 (31%), Positives = 244/447 (54%), Gaps = 34/447 (7%) Query: 1 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF 60 + + + +++A + G+ S+LA+R AVF+DG+RPI+P+ +EG ++R+E + +F +S G Sbjct: 3 ISVLVDYVLIALVGGVGSILANRGIAVFNDGLRPIMPEYLEGKIDRKELAATSFAVSFGL 62 Query: 61 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLL-PVNQLL 119 + GI ++ + +L A + L DI+G + L + G + LL ++ ++ Sbjct: 63 IIGFGIPVSIGSTILVAHSILLAADIIGTWTPANKWGTALAGVVGAVYGVGLLFGLSFIV 122 Query: 120 TA---LPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRY- 175 +A LPV+ LG+L L P++ AF FP +A+ Q G K+ +I + ++ ++ Sbjct: 123 SAFKMLPVNFLGALSLLGGPILLAFCAFPALAVASQHGAKKGMITFGATFVAYLLATKFG 182 Query: 176 -FP-------HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIK 227 F LNP + + + M+ +L A + + E +AS ++VF R SRI K Sbjct: 183 VFSVGNGIKITLNPIGMSLLVAMLFMLYFAA----QIKGEGTSNASLVNVFSARVSRIKK 238 Query: 228 NLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQ--SQTLINQAALAEFMR 285 N +++I+G LI A +S+ I A V P+Q + + +AA+A R Sbjct: 239 NWIWLSIMGGLITAASSVLIIA--------------VDVLPQQLLVKGQVMEAAIATLAR 284 Query: 286 GLGFVPLIATTALATGVYAVAGFTFVYAVDYL-SPNPMVAAVLGAVVISAEVLLLRSIGK 344 +GF+PL+ +TA+ TGVY +AG T ++A+ L NP+VA + G V + EV L K Sbjct: 285 AIGFIPLVFSTAIVTGVYGMAGTTIIFAIGLLLKGNPIVAFIAGFVWMWIEVQALAGTAK 344 Query: 345 WLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRP 404 L ++P +R+ ++IR ++ + +ALL+G+ A KMA G+ + ++ LN+ L +P Sbjct: 345 GLDKFPGLRDMGEHIRTSLTDTIAIALLIGAALACNKMAPNLGYFWVIGVWLLNKKLKKP 404 Query: 405 VQKMAAPVVAVMITGILLNVLYWLGLF 431 + MA +A + GILLN+L + LF Sbjct: 405 LVDMAVGPIAAIALGILLNLLRIVHLF 431 >UniRef50_B9Y6L9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6L9_9FIRM Length = 437 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 150/443 (33%), Positives = 214/443 (48%), Gaps = 29/443 (6%) Query: 2 DLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFV 61 L + IV+ + SLL+H+ + F+DG RP+ P+L+EG M R E + G+ G+V Sbjct: 11 SLPFRAIVLIAICAWASLLSHKCISNFNDGARPVFPELMEGRMTRAEFAVVVTGMGFGWV 70 Query: 62 ASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTA 121 + G S L TGL+ L + TD LG + N +A +G +G L +N TA Sbjct: 71 LA-GFSQWLGTGLIACHLTLIATDCLGAWSPNKWVALIIGGAYGALCAFGTSFINSAFTA 129 Query: 122 LPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSL----IAAVVVLMTRVV----VV 173 LP + L L ++S+P + F +FP VAI QFG K+ + I AVV + VV V Sbjct: 130 LPYNFLNDLTQISTPALPVFCMFPAVAIASQFGAKKGITTGVIEAVVYIFCTVVGAVKVG 189 Query: 174 RYFPHLNPESIEIFIGMVMLLGIAITHDLRHRD-ENDIDASGLSVFEERTSRIIKNLPYI 232 L P + + GM+ LL +I END + L F + +RI N Y+ Sbjct: 190 SISVSLYPYTFAMLAGMICLLVYSINGSKNSESVENDSETENL--FTKNANRIKSNWVYL 247 Query: 233 AIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEF-MRG--LGF 289 I GAL A + I L +AY V S L E M G + F Sbjct: 248 CIQGALNA------------LGIHVLAQAYQPYVL--SSAVLAGNMGTFELAMIGVIIAF 293 Query: 290 VPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRY 349 +PLI +TALATGVY G T V V L+P +A + G E+ LL +GK L ++ Sbjct: 294 IPLIVSTALATGVYQAVGLTSVMLVGCLAPTWWLAPIFGFAAEFVEIQLLGLLGKGLSKF 353 Query: 350 PSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMA 409 P + D IR+AM + +AL+ GS AA G G I + LN+ G+ + K A Sbjct: 354 PELSKCGDYIRDAMVSCIGLALVAGSFLAANATWGAVGIMIVGGFFVLNDVTGQRIPKSA 413 Query: 410 APVVAVMITGILLNVLYWLGLFV 432 +A + GIL N++ +LGL V Sbjct: 414 VGPLAAVAVGILFNIMIFLGLVV 436 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P45546 Uncharacterized protein yhfT n=59 Tax=Bacteria R... 433 e-120 UniRef50_B9CM77 Putative membrane protein n=1 Tax=Atopobium rima... 389 e-107 UniRef50_D0GNT3 Transporter permease n=5 Tax=Bacteria RepID=D0GN... 387 e-106 UniRef50_A1JNH1 Putative membrane protein n=2 Tax=Yersinia RepID... 380 e-104 UniRef50_C9A351 Putative uncharacterized protein n=1 Tax=Enteroc... 379 e-103 UniRef50_UPI0001C35377 putative transport system permease protei... 365 1e-99 UniRef50_B9Y6L9 Putative uncharacterized protein n=1 Tax=Holdema... 360 7e-98 UniRef50_Q9KF96 BH0589 protein n=6 Tax=Bacteria RepID=Q9KF96_BACHD 351 4e-95 UniRef50_Q03C35 Uncharacterized conserved membrane protein n=9 T... 343 6e-93 UniRef50_B4V1N7 ABC-type transport system protein n=4 Tax=Strept... 335 1e-90 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P45546 Uncharacterized protein yhfT n=59 Tax=Bacteria RepID=YHFT_ECOLI Length = 434 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 434/434 (100%), Positives = 434/434 (100%) Query: 1 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF 60 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF Sbjct: 1 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF 60 Query: 61 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT 120 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT Sbjct: 61 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT 120 Query: 121 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN 180 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN Sbjct: 121 ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN 180 Query: 181 PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA 240 PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA Sbjct: 181 PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA 240 Query: 241 AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT 300 AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT Sbjct: 241 AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT 300 Query: 301 GVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR 360 GVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR Sbjct: 301 GVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR 360 Query: 361 NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI 420 NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI Sbjct: 361 NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI 420 Query: 421 LLNVLYWLGLFVPA 434 LLNVLYWLGLFVPA Sbjct: 421 LLNVLYWLGLFVPA 434 >UniRef50_B9CM77 Putative membrane protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM77_9ACTN Length = 442 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 204/438 (46%), Positives = 292/438 (66%), Gaps = 14/438 (3%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 + +I++ + +T+LL+H AVF+DG+RP +P+ +EG M R E FGL IGF+ASV Sbjct: 6 LSVILIGAVCAVTALLSHMGVAVFNDGVRPFVPEFLEGRMPRPEYALAVFGLCIGFIASV 65 Query: 65 GISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPV 124 GI L T LLN WLLFL TDI+G N A GA+WGVL L L +N LT LPV Sbjct: 66 GIGNALATNLLNPWLLFLATDIIGAFCPNKWSAAIAGAVWGVLCLVSLGGINTALTFLPV 125 Query: 125 DVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVV--VVRYFP---HL 179 D+LGSLG+L + +V+ FALFP++AI QFGWK+ ++ AV+ ++ R+ + ++ P + Sbjct: 126 DLLGSLGQLGTYIVTGFALFPVLAITMQFGWKRGVVTAVLAILARIFGPMWKFGPSKASI 185 Query: 180 NPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALI 239 + ++ + +G+++L G AI DL ++ E + + G ++F ER +RI KN+P++ + GALI Sbjct: 186 SADAWMLLVGVILLFGFAIAQDLSNKGEKNGEFEG-NLFSERVARIRKNVPFLMVGGALI 244 Query: 240 AAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALA 299 A + ++ +FAGS VS+F+L AY + LI AA+ E RGL F+PLIA TA+ Sbjct: 245 AVICNLHLFAGSTVSMFSLADAYHGAANASE---LIQSAAVNELFRGLSFIPLIAVTAIT 301 Query: 300 TGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNI 359 TGVY VAGFTF+Y YL+PNP VAA+LGA++I EV+LL IGK LGR+PS+R+A+DNI Sbjct: 302 TGVYGVAGFTFIYVAGYLAPNPFVAAILGALIIFVEVMLLGFIGKQLGRFPSLRDAADNI 361 Query: 360 RNAMNMLMEVALLVGSIFAAIKMAGYTG-----FSIAVAIYFLNESLGRPVQKMAAPVVA 414 R+AM +E A+L GS+ A I M G F+IA A Y+LNE GR + +MA V Sbjct: 362 RSAMGTCVEFAVLFGSLNAVIAMGTKIGNPALAFAIAAAAYYLNEVTGRKIMRMAIGPVF 421 Query: 415 VMITGILLNVLYWLGLFV 432 ++TGI+LN+LY++GL Sbjct: 422 ALVTGIILNLLYFVGLVA 439 >UniRef50_D0GNT3 Transporter permease n=5 Tax=Bacteria RepID=D0GNT3_9FUSO Length = 445 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 150/442 (33%), Positives = 251/442 (56%), Gaps = 20/442 (4%) Query: 6 QIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVG 65 + ++ A L+G S+LA+ AVF+DG+RP++P+ +EG M+R+ + +F LS G V G Sbjct: 3 KFLISALLSGFASILANLGVAVFNDGLRPMMPEFLEGRMDRKALAATSFALSFGLVIGFG 62 Query: 66 ISFTLKTGLLNAWLLFLPTDILGVLAINSLMAF----GLGAIWGVLILTCLLPVNQLLTA 121 I F++ + ++ + L TDI+G + + +GA++GV ++ L V + Sbjct: 63 IPFSIGSTIILIHSILLGTDIIGTSTPRNNVGLALAGIIGALYGVGLVYGLEIVINIFQK 122 Query: 122 LPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFP---- 177 +P+D L SL ++ +P++ FA+FP + + YQ+G K+ +V L+ R +V + Sbjct: 123 MPIDFLPSLAKVGAPIIVGFAVFPALVVGYQYGTKKGAFTLIVTLLVRQIVAVFGKIPVA 182 Query: 178 -----HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYI 232 LNP+ + + + +V++L AI + ++ + + + +F R +R+ KN+ + Sbjct: 183 EKVSITLNPDGMALLVSVVIMLIFAIFD--KETEKTNSNEMLVGIFSARVARVKKNIIPL 240 Query: 233 AIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPL 292 +I+G LIAA S+++ AG +S+ L + +A L R +GFVPL Sbjct: 241 SIMGGLIAAACSLRVVAGDPISLKLLASTLKDTAGGDAKNF---EAGLVALARSIGFVPL 297 Query: 293 IATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSV 352 +ATTA+ TGVY AG T V+ V NP+++ VLGA +++ E+LLL I K L R+P V Sbjct: 298 VATTAITTGVYGPAGMTLVFVVGIFVKNPIISFVLGAAILAVEILLLELIAKSLDRFPGV 357 Query: 353 RNASDNIRNAMNMLMEVALLVGSIFAAIKMAG--YTGFSIAVAIYFLNESLGRPVQKMAA 410 + D IR AM ++EV+LLVG + AA +MAG GF Y LN++ +P+ MA Sbjct: 358 KACGDQIRTAMTKVLEVSLLVGGMIAANEMAGSNGLGFLFVSGFYLLNKTSKKPLVDMAV 417 Query: 411 PVVAVMITGILLNVLYWLGLFV 432 VA ++ GI+LN+LY L L+V Sbjct: 418 GPVATILFGIILNILYLLHLYV 439 >UniRef50_A1JNH1 Putative membrane protein n=2 Tax=Yersinia RepID=A1JNH1_YERE8 Length = 427 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 163/440 (37%), Positives = 252/440 (57%), Gaps = 27/440 (6%) Query: 4 YIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVAS 63 ++II+ + + G + LA++S AV+HDG+RPI+P+ + G M+R+E I+F +SIGF+ Sbjct: 6 LVKIILFSLMGGYATFLANKSIAVYHDGLRPIMPEFMNGNMSRKELAGISFAISIGFITG 65 Query: 64 VGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALP 123 + TL TG++ ++ L DI+GV N+ +A +G ++G LI L + + + LP Sbjct: 66 FAMPITLATGIIVIHIVLLTADIIGVSLNNTKLAVLIGTVYGALITIALDGLIKGFSYLP 125 Query: 124 VDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFP------ 177 V+ L +L + P++ AF FP +A+ YQFG K LI ++ + RVV+ R P Sbjct: 126 VNFLDALASVGDPIIYAFVAFPAIAVGYQFGKKAGLITIIIAFLARVVIERINPVTIAGN 185 Query: 178 --HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIV 235 L+PE I + GM+ LL A + D RH +E + S+F++ RI KN Y+ + Sbjct: 186 EVALSPEGIAMLFGMICLLFFA-SRDKRHGEEIE-----HSLFDDNIKRIRKNAIYLLPM 239 Query: 236 GALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIAT 295 ALI A AG ++ L K I AA+ ++ L F+PLI T Sbjct: 240 AALITITAHYHWIAGEPIAAALLGKGQ------------ITSAAIVAIVQALAFMPLIIT 287 Query: 296 TALATGVYAVAGFT-FVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRN 354 TA+ +GVY G+ + + YL+PNP+VA +LGA + E+ L IGK + R+PS++ Sbjct: 288 TAMISGVYGTNGWCDWFLGLGYLAPNPVVAGILGAGAMGVEITSLSRIGKAMNRFPSLKM 347 Query: 355 ASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVA 414 + DNIR AM ++E+ALLVG + AA ++ TG + V++Y LNE GRPV K+AA +A Sbjct: 348 SGDNIRTAMTQILEIALLVGGVNAANQIWPGTGIFVVVSLYILNEICGRPVMKLAAGPIA 407 Query: 415 VMITGILLNVLYWLGLFVPA 434 ++ GIL N+ LGL V A Sbjct: 408 AIVVGILANIFAVLGLHVVA 427 >UniRef50_C9A351 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A351_ENTGA Length = 438 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 148/446 (33%), Positives = 253/446 (56%), Gaps = 29/446 (6%) Query: 2 DLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFV 61 I+++ +A L G+ ++LA++ AVF+DG+RPI+P+ +EG + ++E + +F LS G V Sbjct: 4 SKIIELVAIALLGGICAVLANKGIAVFNDGLRPIVPEFLEGKIGKKEIAATSFALSFGLV 63 Query: 62 ASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA----IWGVLILTCLLPVNQ 117 GI ++ +L + L TDI+G A + A ++G+ ++ L V Sbjct: 64 IGFGIPVSIGASILLVHSVLLMTDIIGSWAPEGKSGIIISAIIGAMYGIGLVLGLQAVVD 123 Query: 118 LLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFP 177 L +PV+ + SL + +PVV +F++FP VAI Q G+K+ I+ L+T V R+ Sbjct: 124 LFAMMPVNFMDSLSMVGTPVVISFSIFPAVAIASQHGFKKGAISFAATLLTLFAVKRFGT 183 Query: 178 ---------HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKN 228 L+ E + + +GM+ ++ AI D ++ + S +SVF ER +RI KN Sbjct: 184 FDLGNGTSLTLSAEGMSLLVGMIFMIVYAIQ---VKSDGSNSNESLVSVFLERVNRIKKN 240 Query: 229 LPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLG 288 ++A+ G L++A S+ I AG +S+ L S+ ++A LA F RG+G Sbjct: 241 WAWLAVTGGLVSAATSLMIIAGDPISLNLL------------SEGKFSEAGLAAFARGIG 288 Query: 289 FVPLIATTALATGVYAVAGFTFVYAVD-YLSPNPMVAAVLGAVVISAEVLLLRSIGKWLG 347 F+PL+ +TA+ TGVY+ AG TFV+ L NP++A ++G+ ++ EV LL + K L Sbjct: 289 FIPLVFSTAIVTGVYSPAGTTFVFVAGILLHDNPIMAFIVGSALMFIEVQLLSLMAKALD 348 Query: 348 RYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQK 407 ++P +R ++IR AMN ++EVALL+G A+ ++A G+ + + LN +PV + Sbjct: 349 KFPGIREMGEHIRTAMNKVLEVALLIGGAMASEQIAPGIGYFWVIGLMLLNRKAKKPVVE 408 Query: 408 MAAPVVAVMITGILLNVLYWLGLFVP 433 +A +A + G+++N+LY +GLF P Sbjct: 409 LAVGPIAAISLGVIVNILYLVGLFAP 434 >UniRef50_UPI0001C35377 putative transport system permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35377 Length = 426 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 143/444 (32%), Positives = 236/444 (53%), Gaps = 33/444 (7%) Query: 5 IQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASV 64 ++ IV+ +LLA+R AVF+D +RP++P+ EG M R E + F LS G V Sbjct: 1 MRYIVIFLAGAFGALLANRGIAVFNDAVRPVVPEYREGRMTRLEFATTTFALSFGLVIGF 60 Query: 65 GISFTLKTGLLNAWLLFLPTDILGVLAINSLM---------------AFGLGAIWGVLIL 109 GI +++ + ++ L+L TD++G+ + + G ++GVL+L Sbjct: 61 GIPYSIMSPIILVHSLWLGTDVIGIFFPAKNIEKWYLDKESLIGAGLSVLAGGLYGVLLL 120 Query: 110 TCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTR 169 L ++ ALPV++ + +S PV+SAF FP V I +GWK+ L++ VV ++ R Sbjct: 121 AGLQSFVNMMQALPVNIFDAWQNISGPVISAFIAFPCVVITMDYGWKKGLVSLVVSVLLR 180 Query: 170 VVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNL 229 ++V + + + + G+V ++ A+ RD+++ + S+F +R I KN+ Sbjct: 181 QIMVFFGKGDIADGVALLTGLVFIIVFAV------RDKSESTGNLASIFGDRVKNIRKNI 234 Query: 230 PYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGF 289 +IAI+GA+ +M + S+ L+ ++ A F R L F Sbjct: 235 IWIAIMGAIYGLACNMHLLMEGPQSLVALKDGN------------VSSAVSISFARALSF 282 Query: 290 VPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRY 349 +PL A T+L TG + GF F L+PN ++AAV GAVV+S E L L + K + Sbjct: 283 IPLKALTSLTTGTFVTDGFGFTATAGLLAPNGVLAAVFGAVVMSLEALSLAVVAKLFDKV 342 Query: 350 PSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMA 409 PS++ ++D+IR AM L+EVA+LVGS+ AA MA GF + + +NE +P+ +MA Sbjct: 343 PSIKKSADSIRVAMTRLLEVAILVGSMSAAEGMAPGFGFLVVGGFFVMNEYFKKPIVRMA 402 Query: 410 APVVAVMITGILLNVLYWLGLFVP 433 +AV+ G+L+NVL LGL+ Sbjct: 403 VGPIAVIAVGVLVNVLAVLGLYSV 426 >UniRef50_B9Y6L9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6L9_9FIRM Length = 437 Score = 360 bits (924), Expect = 7e-98, Method: Composition-based stats. Identities = 145/442 (32%), Positives = 212/442 (47%), Gaps = 27/442 (6%) Query: 2 DLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFV 61 L + IV+ + SLL+H+ + F+DG RP+ P+L+EG M R E + G+ G+V Sbjct: 11 SLPFRAIVLIAICAWASLLSHKCISNFNDGARPVFPELMEGRMTRAEFAVVVTGMGFGWV 70 Query: 62 ASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTA 121 + G S L TGL+ L + TD LG + N +A +G +G L +N TA Sbjct: 71 LA-GFSQWLGTGLIACHLTLIATDCLGAWSPNKWVALIIGGAYGALCAFGTSFINSAFTA 129 Query: 122 LPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSL----IAAVVVLMTRVV----VV 173 LP + L L ++S+P + F +FP VAI QFG K+ + I AVV + VV V Sbjct: 130 LPYNFLNDLTQISTPALPVFCMFPAVAIASQFGAKKGITTGVIEAVVYIFCTVVGAVKVG 189 Query: 174 RYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIA 233 L P + + GM+ LL +I + D+ ++F + +RI N Y+ Sbjct: 190 SISVSLYPYTFAMLAGMICLLVYSINGSKNSES-VENDSETENLFTKNANRIKSNWVYLC 248 Query: 234 IVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRG---LGFV 290 I GAL A + I L +AY V S L E + F+ Sbjct: 249 IQGALNA------------LGIHVLAQAYQPYVL--SSAVLAGNMGTFELAMIGVIIAFI 294 Query: 291 PLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYP 350 PLI +TALATGVY G T V V L+P +A + G E+ LL +GK L ++P Sbjct: 295 PLIVSTALATGVYQAVGLTSVMLVGCLAPTWWLAPIFGFAAEFVEIQLLGLLGKGLSKFP 354 Query: 351 SVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAA 410 + D IR+AM + +AL+ GS AA G G I + LN+ G+ + K A Sbjct: 355 ELSKCGDYIRDAMVSCIGLALVAGSFLAANATWGAVGIMIVGGFFVLNDVTGQRIPKSAV 414 Query: 411 PVVAVMITGILLNVLYWLGLFV 432 +A + GIL N++ +LGL V Sbjct: 415 GPLAAVAVGILFNIMIFLGLVV 436 >UniRef50_Q9KF96 BH0589 protein n=6 Tax=Bacteria RepID=Q9KF96_BACHD Length = 429 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 147/445 (33%), Positives = 248/445 (55%), Gaps = 31/445 (6%) Query: 4 YIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVAS 63 ++I+++ C+ + +++A+ AVF+DGIRPI+P+ +EG M R+E G AF +S G V Sbjct: 1 MLEIMLMVCIGALAAVMANLGIAVFNDGIRPIVPENLEGRMTRKELGVTAFAMSFGLVIG 60 Query: 64 VGISFTLKTGLLNAWLLFLPTDILGVL----AINSLMAFGLGAIWGVLILTCLLPVNQLL 119 GI ++ ++ + L +DI+G+ + + +A +G ++G I L V L Sbjct: 61 FGIPISIAGSIILIHSILLGSDIIGLALDRGKVKTTIAAIIGGLYGAGIYMGLQVVVDLF 120 Query: 120 TALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPH- 178 T LP++ + + ++ PVV +F +FP +AI QFG K+ +IA + R ++V Sbjct: 121 TMLPLNFVDAFNKVGDPVVVSFMVFPAIAIALQFGVKKGIIAFAIAAFARQLIVFTNGAE 180 Query: 179 ----------LNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKN 228 L+PE I + +GM +L+ A +R + E ++ ++F +R +RI K+ Sbjct: 181 LIKIGSTPVVLSPEGIALVVGMFLLIFFA----MREKSEETNLSTLATLFTDRVARIKKH 236 Query: 229 LPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLG 288 + + G L+AA ++ + AG +S+ L + +++ +A + +G Sbjct: 237 RWILMLSGGLVAAATNLLLIAGDPISLNLLA------------EGKMSEGGIAALAKAIG 284 Query: 289 FVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGR 348 FVPLIA+TA+ATGVY GFTFV+A +PN +A ++GA++I E+ LL + +L R Sbjct: 285 FVPLIASTAIATGVYGPIGFTFVFAAGIFAPNLGIALLIGALIIFLEIQLLTKLATFLDR 344 Query: 349 YPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKM 408 YP +R + +NIR AM+ ++EVALL+G AA + GF Y +NE GRP+ +M Sbjct: 345 YPGIRASGENIRTAMSRVLEVALLIGGANAADAIVPGFGFFAIAGFYLINEIAGRPIVRM 404 Query: 409 AAPVVAVMITGILLNVLYWLGLFVP 433 A V +I GI+ N+L LGL+ P Sbjct: 405 AIGPVGAIIVGIVGNLLVLLGLYTP 429 >UniRef50_Q03C35 Uncharacterized conserved membrane protein n=9 Tax=Firmicutes RepID=Q03C35_LACC3 Length = 431 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 136/445 (30%), Positives = 237/445 (53%), Gaps = 30/445 (6%) Query: 1 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF 60 + + + +++A + G+ S+LA+R AVF+DG+RPI+P+ +EG ++R+E + +F +S G Sbjct: 3 ISVLVDYVLIALVGGVGSILANRGIAVFNDGLRPIMPEYLEGKIDRKELAATSFAVSFGL 62 Query: 61 VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVL----ILTCLLPVN 116 + GI ++ + +L A + L DI+G + L + G + +L L + Sbjct: 63 IIGFGIPVSIGSTILVAHSILLAADIIGTWTPANKWGTALAGVVGAVYGVGLLFGLSFIV 122 Query: 117 QLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYF 176 LPV+ LG+L L P++ AF FP +A+ Q G K+ +I + ++ ++ Sbjct: 123 SAFKMLPVNFLGALSLLGGPILLAFCAFPALAVASQHGAKKGMITFGATFVAYLLATKFG 182 Query: 177 P---------HLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIK 227 LNP + + + M+ +L A + + E +AS ++VF R SRI K Sbjct: 183 VFSVGNGIKITLNPIGMSLLVAMLFMLYFAA----QIKGEGTSNASLVNVFSARVSRIKK 238 Query: 228 NLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGL 287 N +++I+G LI A +S+ I A + L K + +AA+A R + Sbjct: 239 NWIWLSIMGGLITAASSVLIIAVDVLPQQLLVKGQ------------VMEAAIATLARAI 286 Query: 288 GFVPLIATTALATGVYAVAGFTFVYAVDYL-SPNPMVAAVLGAVVISAEVLLLRSIGKWL 346 GF+PL+ +TA+ TGVY +AG T ++A+ L NP+VA + G V + EV L K L Sbjct: 287 GFIPLVFSTAIVTGVYGMAGTTIIFAIGLLLKGNPIVAFIAGFVWMWIEVQALAGTAKGL 346 Query: 347 GRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQ 406 ++P +R+ ++IR ++ + +ALL+G+ A KMA G+ + ++ LN+ L +P+ Sbjct: 347 DKFPGLRDMGEHIRTSLTDTIAIALLIGAALACNKMAPNLGYFWVIGVWLLNKKLKKPLV 406 Query: 407 KMAAPVVAVMITGILLNVLYWLGLF 431 MA +A + GILLN+L + LF Sbjct: 407 DMAVGPIAAIALGILLNLLRIVHLF 431 >UniRef50_B4V1N7 ABC-type transport system protein n=4 Tax=Streptomyces RepID=B4V1N7_9ACTO Length = 433 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 182/439 (41%), Positives = 262/439 (59%), Gaps = 25/439 (5%) Query: 8 IVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGIS 67 ++V + +T+ AH + AVF+DG+RP + I G R G+++FGLS GFV +G Sbjct: 1 MLVVGVCALTAGAAHMALAVFNDGVRPFMLDFIHGRATRNATGAVSFGLSAGFVFGLGAP 60 Query: 68 FTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVL 127 L TG+LN WLLFLPTD+LG+LA +A LGA WG +++ L N+L LPVD L Sbjct: 61 MALSTGVLNPWLLFLPTDVLGILAPRRWLAPLLGAAWGAVVVYGLGGANELAHGLPVDFL 120 Query: 128 GSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIF 187 ++ ++S+P++ FALFP +A+ QFG + + V L V+ +R +P + + + Sbjct: 121 TAMRQMSTPILFLFALFPALAVTKQFGRLRGALTGAVTLGLVVLTMRVWPGVFAGAPAMA 180 Query: 188 IGMVMLLGIAITHDLRH-RDENDIDASG------------LSVFEERTSRIIKNLPYIAI 234 +G++ML+G A+ D+R R + A G S+F +R+ ++LP Sbjct: 181 VGVLMLIGFAVAADVRTARASGTVAAEGAGGVGPSAEDPMASLFSSGAARLRRHLPLFMA 240 Query: 235 VGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIA 294 +GA + A+A MK+F G E + F + K A +AA +F R GF+PLIA Sbjct: 241 LGAGVCALAQMKVFGGGEATSFLIAKGQYA------------EAAQVDFYRVFGFLPLIA 288 Query: 295 TTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRN 354 TTALA+G Y +AGFT VY + YL PNP VAA +GA+V + EVL L SIG LGR PSVR+ Sbjct: 289 TTALASGAYGIAGFTLVYPIGYLLPNPFVAAAVGALVFALEVLALSSIGGALGRLPSVRD 348 Query: 355 ASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVA 414 S+++R A+ + +A+L GS+ AA M G G I +Y LNE++GRPV +MAA A Sbjct: 349 CSEHLRAAIGDALGLAILFGSLMAANAMGGGLGILICGGLYLLNEAMGRPVVRMAAAPAA 408 Query: 415 VMITGILLNVLYWLGLFVP 433 V+ G+ LN LYWLGLF P Sbjct: 409 VLAGGVALNGLYWLGLFTP 427 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.325 0.144 0.373 Lambda K H 0.267 0.0434 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,565,763,144 Number of Sequences: 3077464 Number of extensions: 62821860 Number of successful extensions: 330131 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 20 Number of HSP's successfully gapped in prelim test: 292 Number of HSP's that attempted gapping in prelim test: 329677 Number of HSP's gapped (non-prelim): 579 length of query: 434 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 302 effective length of database: 634,171,108 effective search space: 191519674616 effective search space used: 191519674616 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 95 (41.1 bits)