123 c1jscA_ Probab=62.12   E-value=9.7  Score=16.77  Aligned_columns=127  Identities=9%

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             99999999999999985086569986257775024578999999999984880003487230147888999864211368
Q batch____       116 EQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYE  195 (809)
Q Consensus       116 deAld~ia~kl~~i~~~~G~~si~~~~~~~~~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~~~~  195 (809)
                      .++++.++++|++      .+......+..  ..........+.+|+..+|.+..... .+-+......+...|.. +..
T Consensus       195 ~~~~~~~~~~l~~------ak~pvi~~G~~--~~~~~~~~~~l~~lae~~~~pv~~t~-~~~~~~~~~~p~~~g~~-g~~  264 (541)
T c1jscA_         195 MQSINKAADLINL------AKKPVLYVGAG--ILNHADGPRLLKELSDRAQIPVTTTL-QGLGSFDQEDPKSLDML-GMH  264 (541)
T ss_dssp             HHHHHHHHHHHHH------CSSEEEEECGG--GGSSTTHHHHHHHHHHHTTCCEEECT-TTTTSSCTTSTTEEEEC-STT
T ss_pred             HHHHHHHHHHHHC------CCCEEEEECCC--CCCCHHHHHHHHHHHHHHCCCEEECH-HCCCCCCCCCCCCCCCC-CCC
T ss_conf             8899999999860------79739997787--66897899999999998089788320-00756688887420210-245


Q ss_pred             CCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCH
Q ss_conf             888887799608989997597557322432100115889999999779869998176481
Q batch____       196 QQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSE  255 (809)
Q Consensus       196 ~~~~~~~D~~~ad~ii~~G~np~~t~~~~~~~~~~~~~~~~~~a~~~G~kivvIDPr~t~  255 (809)
                      ......+-++++|+||.+|+...+.....+.....   ...........++|.||.....
T Consensus       265 ~~~~~~~~l~~aD~il~iG~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~i~i~~~~~~  321 (541)
T c1jscA_         265 GCATANLAVQNADLIIAVGARFDDRVTGNISKFAP---EARRAAAEGRGGIIHFEVSPKN  321 (541)
T ss_dssp             SCHHHHHHHHHCSEEEEESCCCCHHHHSSGGGSSH---HHHHHHHTTSCEEEEEESCGGG
T ss_pred             CCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC---CCCCCCCCCCCCEEEEECCHHH
T ss_conf             79899999863988999788768220256543365---2101233678618998489378