BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (231 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q1QW30 Flagellar hook capping protein n=1 Tax=Chromohal... 196 7e-49 UniRef50_A9IKQ3 Basal-body rod modification protein FlgD n=5 Tax... 183 4e-45 UniRef50_Q2Y9E5 Flagellar hook capping protein n=1 Tax=Nitrososp... 175 1e-42 UniRef50_C5CXV4 Flagellar hook capping protein n=1 Tax=Variovora... 171 1e-41 UniRef50_C4KAU5 Flagellar hook capping protein n=2 Tax=Rhodocycl... 167 2e-40 UniRef50_C6P5G1 Flagellar hook capping protein n=1 Tax=Sideroxyd... 163 5e-39 UniRef50_A4G6B2 Basal-body rod modification protein FlgD n=2 Tax... 161 2e-38 UniRef50_Q3SIE0 Flagellar basal-body rod modification protein Fl... 158 1e-37 UniRef50_B4EYN7 Basal-body rod modification protein n=3 Tax=Prot... 156 5e-37 UniRef50_C6WVA8 Flagellar hook capping protein n=1 Tax=Methylote... 154 2e-36 UniRef50_Q1GZW4 Flagellar hook capping protein n=3 Tax=cellular ... 154 2e-36 UniRef50_C6MIR9 Flagellar hook capping protein n=1 Tax=Nitrosomo... 152 8e-36 UniRef50_Q46PG2 Flagellar hook capping protein n=4 Tax=Cupriavid... 151 1e-35 UniRef50_P57421 Basal-body rod modification protein flgD n=4 Tax... 150 3e-35 UniRef50_Q0AJ54 Flagellar hook capping protein n=2 Tax=Nitrosomo... 150 4e-35 UniRef50_B2UJX2 Flagellar hook capping protein n=6 Tax=Ralstonia... 147 2e-34 UniRef50_Q47I24 Flagellar hook capping protein n=2 Tax=Betaprote... 146 7e-34 UniRef50_A6GSX8 Flagellar hook capping protein n=1 Tax=Limnobact... 144 2e-33 UniRef50_C5V018 Flagellar hook capping protein n=1 Tax=Gallionel... 144 3e-33 UniRef50_Q3JX26 Basal-body rod modification protein FlgD n=56 Ta... 140 2e-32 UniRef50_C1DC22 Flagellar hook capping protein n=1 Tax=Laribacte... 130 4e-29 UniRef50_C4SBL2 Flagellar hook capping protein n=4 Tax=Enterobac... 126 6e-28 UniRef50_C5SD64 Flagellar hook capping protein n=1 Tax=Allochrom... 125 8e-28 UniRef50_B2PY25 Putative uncharacterized protein n=1 Tax=Provide... 125 2e-27 UniRef50_D1NZK4 Basal-body rod modification protein FlgD n=3 Tax... 124 3e-27 UniRef50_B9Z358 Flagellar hook capping protein n=1 Tax=Lutiella ... 120 3e-26 UniRef50_B1XWJ6 Flagellar hook capping protein n=1 Tax=Leptothri... 120 4e-26 UniRef50_Q4K867 Basal-body rod modification protein FlgD n=15 Ta... 119 6e-26 UniRef50_D0L1M4 Flagellar hook capping protein n=1 Tax=Halothiob... 118 2e-25 UniRef50_C7I103 Flagellar hook capping protein n=1 Tax=Thiomonas... 117 2e-25 UniRef50_P96970 FlgD (Fragment) n=1 Tax=Proteus mirabilis RepID=... 117 3e-25 UniRef50_Q7NU17 Basal-body rod modification protein FlgD n=1 Tax... 117 4e-25 UniRef50_Q3J8L2 Flagellar hook capping protein n=2 Tax=Nitrosoco... 116 5e-25 UniRef50_A9BQ62 Flagellar hook capping protein n=4 Tax=cellular ... 115 1e-24 UniRef50_B7VKM1 Flagellar hook capping protein FlgD n=54 Tax=Vib... 114 3e-24 UniRef50_A1WFE4 Flagellar hook capping protein n=8 Tax=Comamonad... 113 5e-24 UniRef50_Q5X5U4 Flagellar basal-body rod modification protein Fl... 112 1e-23 UniRef50_Q2SDU0 Flagellar hook capping protein n=4 Tax=Gammaprot... 111 2e-23 UniRef50_B7UXB0 Flagellar basal-body rod modification protein Fl... 111 2e-23 UniRef50_B9ZPV2 Flagellar hook capping protein n=1 Tax=Thioalkal... 110 5e-23 UniRef50_B4SIL9 Flagellar hook capping protein n=13 Tax=Xanthomo... 107 4e-22 UniRef50_Q5R0P5 Flagellar hook capping protein n=2 Tax=Idiomarin... 106 6e-22 UniRef50_Q6AJT4 Related to basal-body rod modification protein (... 105 1e-21 UniRef50_B8GQB0 Flagellar hook capping protein n=1 Tax=Thioalkal... 105 1e-21 UniRef50_C6BXM0 Flagellar hook capping protein n=1 Tax=Desulfovi... 105 1e-21 UniRef50_A7K5D2 Flagellar basal-body rod modification protein Fl... 105 1e-21 UniRef50_A2SKD5 Flagellar hook capping protein n=1 Tax=Methylibi... 104 2e-21 UniRef50_A6DYV3 Flagellar scaffolding protein FlgD n=1 Tax=Roseo... 104 3e-21 UniRef50_Q485P4 Basal-body rod modification protein FlgD n=1 Tax... 104 3e-21 UniRef50_A1WUE3 Flagellar hook capping protein n=1 Tax=Halorhodo... 103 4e-21 UniRef50_D2L1Z4 Flagellar hook capping protein n=1 Tax=Desulfovi... 103 4e-21 UniRef50_C6NWL0 Flagellar basal-body rod modification protein Fl... 103 4e-21 UniRef50_Q0AA88 Flagellar hook capping protein n=1 Tax=Alkalilim... 103 5e-21 UniRef50_Q2NR91 Putative flagellar hook formation protein FlgD n... 103 6e-21 UniRef50_D1U8I5 Flagellar hook capping protein n=1 Tax=Desulfovi... 102 9e-21 UniRef50_Q2NX18 Flagellar basal-body rod modification protein Fl... 101 2e-20 UniRef50_A4BQE9 Flagellar basal body rod modification protein n=... 100 4e-20 UniRef50_Q6MHY7 Basal-body rod modification protein flgD n=1 Tax... 100 6e-20 UniRef50_A6FHZ1 Flagellar basal body rod modification protein n=... 99 8e-20 UniRef50_C4XMS4 Flagellar basal-body rod modification protein Fl... 99 8e-20 UniRef50_Q8D3G1 FlgD protein n=1 Tax=Wigglesworthia glossinidia ... 99 1e-19 UniRef50_A4SL11 Flagellar hook capping protein FlgD n=3 Tax=Aero... 97 3e-19 UniRef50_Q0FMJ5 Flagellar hook capping protein n=1 Tax=Roseovari... 97 6e-19 UniRef50_Q1ZFB9 Flagellar basal body rod modification protein n=... 96 7e-19 UniRef50_A9BEX8 Flagellar hook capping protein n=1 Tax=Petrotoga... 96 1e-18 UniRef50_B8DS26 Flagellar hook capping protein n=1 Tax=Desulfovi... 96 1e-18 UniRef50_A8TLX1 Flagellar hook capping protein n=1 Tax=alpha pro... 95 1e-18 UniRef50_Q3A5C3 Flagellar hook initiation protein FlgD n=1 Tax=P... 95 2e-18 UniRef50_Q21IK8 Flagellar hook capping protein n=4 Tax=Gammaprot... 95 2e-18 UniRef50_Q1JZT2 Flagellar hook capping protein n=1 Tax=Desulfuro... 94 3e-18 UniRef50_C8WYV7 Flagellar hook capping protein n=1 Tax=Desulfoha... 94 3e-18 UniRef50_D0MGC4 Flagellar hook capping protein n=1 Tax=Rhodother... 94 4e-18 UniRef50_Q2RZC4 Basal-body rod modification protein FlgD n=1 Tax... 94 4e-18 UniRef50_C7LRK4 Flagellar hook capping protein n=1 Tax=Desulfomi... 94 4e-18 UniRef50_B7IDJ4 Basal-body rod modification protein FlgD n=1 Tax... 93 6e-18 UniRef50_C0GT27 Flagellar hook capping protein n=1 Tax=Desulfona... 93 6e-18 UniRef50_Q1N303 Flagellar hook capping protein n=1 Tax=Bermanell... 92 1e-17 UniRef50_Q3IDW5 Flagellar biosynthesis; initiation of hook assem... 92 2e-17 UniRef50_C6HWM8 Flagellar hook capping protein n=1 Tax=Leptospir... 91 3e-17 UniRef50_B9CZX6 Flagellar hook assembly protein n=2 Tax=Campylob... 91 3e-17 UniRef50_A6F9Q1 LfgD n=1 Tax=Moritella sp. PE36 RepID=A6F9Q1_9GAMM 91 3e-17 UniRef50_B8J086 Flagellar hook capping protein n=1 Tax=Desulfovi... 91 3e-17 UniRef50_A4WT49 Flagellar hook capping protein n=5 Tax=Rhodobact... 91 4e-17 UniRef50_B5EEN7 Flagellar hook capping protein n=5 Tax=Geobacter... 91 4e-17 UniRef50_A8FXW6 Flagellar hook capping protein n=21 Tax=Shewanel... 89 8e-17 UniRef50_Q4JMN7 Predicted flagellar hook capping protein n=1 Tax... 89 9e-17 UniRef50_A6W1A4 Flagellar hook capping protein n=2 Tax=Marinomon... 89 1e-16 UniRef50_A8FPA7 Flagellar hook capping protein n=8 Tax=Shewanell... 89 1e-16 UniRef50_Q39R05 Flagellar hook capping protein n=2 Tax=Geobacter... 89 1e-16 UniRef50_A6LMJ0 Flagellar hook capping protein n=1 Tax=Thermosip... 89 2e-16 UniRef50_B8FK44 Flagellar hook capping protein n=1 Tax=Desulfati... 88 2e-16 UniRef50_C6C0W1 Flagellar hook capping protein n=1 Tax=Desulfovi... 87 4e-16 UniRef50_A3V266 Flagellar scaffolding protein FlgD n=3 Tax=Rhodo... 87 4e-16 UniRef50_C8WBV8 Flagellar hook capping protein n=4 Tax=Zymomonas... 87 5e-16 UniRef50_C4TUA9 Basal-body rod modification protein n=1 Tax=Yers... 86 7e-16 UniRef50_A3UFN5 Flagellar hook assembly protein FlgD n=1 Tax=Oce... 86 8e-16 UniRef50_Q1K368 Flagellar hook capping protein n=1 Tax=Desulfuro... 86 8e-16 UniRef50_C8QYQ2 Flagellar hook capping protein n=1 Tax=Desulfuri... 86 1e-15 UniRef50_Q2BQT9 Basal-body rod modification protein FlgD n=1 Tax... 86 1e-15 UniRef50_A8F889 Flagellar hook capping protein n=1 Tax=Thermotog... 86 1e-15 UniRef50_Q2LKA7 FlgDL n=1 Tax=Aeromonas hydrophila RepID=Q2LKA7_... 85 2e-15 UniRef50_A5V5R8 Flagellar hook capping protein n=1 Tax=Sphingomo... 85 2e-15 UniRef50_Q1NGN4 Flagellar scaffolding protein n=1 Tax=Sphingomon... 85 2e-15 UniRef50_Q15R84 Flagellar hook capping protein n=2 Tax=Alteromon... 85 2e-15 UniRef50_A0Z355 Flagellar hook capping protein n=3 Tax=unclassif... 85 2e-15 UniRef50_D1U365 Flagellar hook capping protein n=1 Tax=Desulfovi... 85 2e-15 UniRef50_C4UZG9 Basal-body rod modification protein n=2 Tax=Ente... 85 2e-15 UniRef50_Q2RWZ4 Flagellar hook capping protein n=1 Tax=Rhodospir... 85 2e-15 UniRef50_A7HV67 Flagellar hook capping protein n=1 Tax=Parvibacu... 84 5e-15 UniRef50_D1B5D1 Flagellar hook capping protein n=1 Tax=Sulfurosp... 83 6e-15 UniRef50_A5IJB4 Flagellar hook capping protein n=6 Tax=Thermotog... 83 9e-15 UniRef50_B2K1Q4 Flagellar hook capping protein n=23 Tax=Yersinia... 82 1e-14 UniRef50_A4U4K0 Basal-body rod modification protein flgD n=1 Tax... 82 2e-14 UniRef50_Q1NVF9 Flagellar hook capping protein n=2 Tax=delta pro... 82 2e-14 UniRef50_Q2LSZ6 Flagellar hook capping protein n=1 Tax=Syntrophu... 81 2e-14 UniRef50_Q30UM0 Flagellar hook capping protein n=2 Tax=Campyloba... 81 2e-14 UniRef50_A3U109 Related to basal-body rod modification protein (... 81 3e-14 UniRef50_B4UFG0 Flagellar hook capping protein n=3 Tax=Anaeromyx... 81 3e-14 UniRef50_A4XNR6 Flagellar hook capping protein n=1 Tax=Pseudomon... 81 3e-14 UniRef50_A4C6H0 Flagellar basal body rod modification protein n=... 80 4e-14 UniRef50_UPI0001826559 flagellar basal body rod modification pro... 80 4e-14 UniRef50_Q31FK9 Flagellar hook capping protein FlgD n=1 Tax=Thio... 80 5e-14 UniRef50_Q1MQV6 Flagellar hook capping protein n=1 Tax=Lawsonia ... 80 5e-14 UniRef50_A1VDY6 Flagellar hook capping protein n=5 Tax=Desulfovi... 80 7e-14 UniRef50_A7ZB54 Flagellar hook assembly protein n=1 Tax=Campylob... 79 8e-14 UniRef50_A4BEL4 Flagellar hook capping protein n=1 Tax=Reinekea ... 79 1e-13 UniRef50_B4WBD2 Flagellar hook capping protein, putative n=2 Tax... 78 2e-13 UniRef50_Q0C5K2 Putative basal-body rod modification protein Flg... 78 2e-13 UniRef50_B6AMC0 Probable flagellar hook capping protein FlgD n=2... 78 3e-13 UniRef50_Q1YV96 Flagellar basal body rod modification protein n=... 77 4e-13 UniRef50_A3T090 Flagellar hook assembly protein FlgD n=2 Tax=Sul... 77 4e-13 UniRef50_A4U361 Basal-body rod modification protein FlgD n=1 Tax... 77 5e-13 UniRef50_A7HN98 Flagellar hook capping protein n=1 Tax=Fervidoba... 76 1e-12 UniRef50_B6IQD6 Basal-body rod modification protein FlgD, putati... 76 1e-12 UniRef50_C6XM56 Flagellar hook capping protein n=1 Tax=Hirschia ... 75 2e-12 UniRef50_B0UIW9 Flagellar hook capping protein n=9 Tax=Alphaprot... 75 2e-12 UniRef50_B4RG78 Flagellar hook assembly protein n=1 Tax=Phenylob... 74 5e-12 UniRef50_A0LDL3 Flagellar hook capping protein n=1 Tax=Magnetoco... 73 7e-12 UniRef50_A5ESH7 Putative flagellar basal-body rod modification p... 73 8e-12 UniRef50_C1SLD5 Flagellar hook capping protein n=1 Tax=Denitrovi... 72 1e-11 UniRef50_C5SMJ0 Flagellar hook capping protein n=2 Tax=Asticcaca... 71 3e-11 UniRef50_A1T0J4 Flagellar basal-body rod modification protein Fl... 71 3e-11 UniRef50_Q0EZL7 Flagellar hook capping protein n=1 Tax=Mariprofu... 70 4e-11 UniRef50_Q2C8I4 Flagellar basal body rod modification protein n=... 70 4e-11 UniRef50_B3QDF7 Flagellar hook capping protein n=9 Tax=Bradyrhiz... 70 5e-11 UniRef50_C6BZU8 Flagellar hook capping protein n=1 Tax=Desulfovi... 70 5e-11 UniRef50_Q1GCA6 Flagellar basal-body rod modification protein Fl... 70 6e-11 UniRef50_A9DSD1 Flagellar hook capping protein n=1 Tax=Oceanibul... 69 1e-10 UniRef50_Q2WA16 Flagellar hook capping protein n=2 Tax=Magnetosp... 69 1e-10 UniRef50_A7JZA8 Flagellar basal-body rod modification protein Fl... 69 1e-10 UniRef50_B6AV37 Possible FlgD protein n=1 Tax=Rhodobacterales ba... 68 3e-10 UniRef50_B3EBG4 Flagellar hook capping protein n=2 Tax=Desulfuro... 68 3e-10 UniRef50_B9L649 Flagellar hook capping protein n=2 Tax=Nautiliac... 67 4e-10 UniRef50_Q0FVE9 Possible FlgD protein n=2 Tax=Rhodobacteraceae R... 67 4e-10 UniRef50_D0I441 Flagellar basal-body rod modification protein Fl... 67 4e-10 UniRef50_B5JZB8 Basal-body rod modification protein FlgD n=2 Tax... 67 6e-10 UniRef50_A5FUQ9 Flagellar hook capping protein n=1 Tax=Acidiphil... 67 6e-10 UniRef50_B6IT44 Basal-body rod modification protein FlgD, putati... 66 9e-10 UniRef50_B0SWE2 Flagellar hook capping protein n=3 Tax=Caulobact... 66 1e-09 UniRef50_A0RLY6 Flagellar hook assembly protein n=3 Tax=Campylob... 65 1e-09 UniRef50_Q2CGF8 Flagellar hook assembly protein FlgD n=1 Tax=Oce... 64 3e-09 UniRef50_B0K1S4 Flagellar hook capping protein n=9 Tax=Thermoana... 64 6e-09 UniRef50_B6QZA4 Flagellar hook capping protein n=1 Tax=Pseudovib... 63 6e-09 UniRef50_A5L6P4 Flagellar basal body rod modification protein D ... 63 7e-09 UniRef50_B9L4C9 Flagellar hook capping protein n=1 Tax=Thermomic... 63 9e-09 UniRef50_Q5WFR3 Flagellar basal-body rod modification protein Fl... 63 9e-09 UniRef50_D1C163 Flagellar hook capping protein n=1 Tax=Sphaeroba... 62 1e-08 UniRef50_C5EXK1 Flagellar basal body rod modification protein n=... 61 3e-08 UniRef50_A3PFK9 Flagellar hook capping protein n=4 Tax=Rhodobact... 61 4e-08 UniRef50_A0P3G8 Flagellar hook capping protein n=2 Tax=Labrenzia... 60 4e-08 UniRef50_B1K3C8 Flagellar hook capping protein n=2 Tax=Burkholde... 60 5e-08 UniRef50_B9NLP1 Basal-body rod modification protein FlgD n=2 Tax... 60 5e-08 UniRef50_Q2RRB2 Flagellar hook capping protein n=1 Tax=Rhodospir... 60 5e-08 UniRef50_A6FKY3 Possible FlgD protein n=1 Tax=Roseobacter sp. Az... 60 6e-08 UniRef50_Q1GP08 Flagellar hook capping protein n=2 Tax=Sphingomo... 60 6e-08 UniRef50_Q0ARV5 Flagellar hook capping protein n=1 Tax=Maricauli... 60 7e-08 UniRef50_C1A556 Putative flagellar basal-body rod modification p... 59 1e-07 UniRef50_Q5LMU9 Basal-body rod modification protein FlgD n=1 Tax... 59 1e-07 UniRef50_A9CK64 Hook formation protein n=8 Tax=Rhizobiaceae RepI... 58 2e-07 UniRef50_A8MHE3 Flagellar hook capping protein n=1 Tax=Alkaliphi... 58 2e-07 UniRef50_C1PG44 Flagellar hook capping protein n=1 Tax=Bacillus ... 58 3e-07 UniRef50_A3ZNY0 Probable basal-body rod modification protein Flg... 58 3e-07 UniRef50_B5YIG3 Flagellar hook capping protein n=1 Tax=Thermodes... 58 3e-07 UniRef50_A1HN34 Flagellar hook capping protein n=1 Tax=Thermosin... 58 3e-07 UniRef50_A3V1Q8 Possible FlgD protein n=1 Tax=Loktanella vestfol... 57 4e-07 UniRef50_UPI00016C5509 Flagellar hook capping protein n=1 Tax=Ge... 57 5e-07 UniRef50_C5CYE7 Flagellar hook capping protein n=1 Tax=Variovora... 57 5e-07 UniRef50_A1VXC7 Flagellar hook assembly protein n=15 Tax=Campylo... 57 6e-07 UniRef50_B6JMC9 Flagellar hook assembly protein n=13 Tax=Helicob... 57 7e-07 UniRef50_Q28JI8 Basal-body rod modification protein FlgD n=1 Tax... 56 8e-07 UniRef50_C8W1G3 Flagellar hook capping protein n=1 Tax=Desulfoto... 56 8e-07 UniRef50_C3MG46 Predicted flagellar hook capping protein FlgD n=... 56 8e-07 UniRef50_D2LSH3 Flagellar hook capping protein n=1 Tax=Bacillus ... 56 9e-07 UniRef50_C0QPA6 Flagellar hook capping protein FlgD n=1 Tax=Pers... 56 1e-06 UniRef50_C7BXG3 Flagellar hook assembly protein FlgD n=5 Tax=Hel... 56 1e-06 UniRef50_A8LNK4 Flagellar hook capping protein FlgD n=1 Tax=Dino... 55 1e-06 UniRef50_D2TJ83 Lateral flagellar rod protein n=2 Tax=Citrobacte... 55 1e-06 UniRef50_UPI00016996F7 flagellar basal body rod modification pro... 55 2e-06 UniRef50_B1YI97 Flagellar hook capping protein n=1 Tax=Exiguobac... 55 2e-06 UniRef50_B7XQJ3 Basal-body rod modification protein flgD n=1 Tax... 55 2e-06 UniRef50_Q7UII1 Probable basal-body rod modification protein Flg... 55 2e-06 UniRef50_UPI0001BCF0E6 flagellar basal body rod modification pro... 55 2e-06 UniRef50_A8VS08 Succinyl-CoA synthetase, alpha subunit n=1 Tax=B... 55 2e-06 UniRef50_A3SKB3 Possible FlgD protein n=1 Tax=Roseovarius nubinh... 55 2e-06 UniRef50_A4XIY2 Flagellar hook capping protein n=2 Tax=Clostridi... 55 3e-06 UniRef50_A1UTS5 Flagellar hook capping protein n=1 Tax=Bartonell... 55 3e-06 UniRef50_A6TRQ2 Flagellar hook capping protein n=1 Tax=Alkaliphi... 55 3e-06 UniRef50_Q9KA39 Flagellar hook assembly protein n=2 Tax=Bacillus... 54 3e-06 UniRef50_B2IG35 Flagellar hook capping protein n=1 Tax=Beijerinc... 54 4e-06 UniRef50_A3IF23 Flagellar basal body rod modification protein D ... 54 5e-06 UniRef50_A3K323 Possible FlgD protein n=1 Tax=Sagittula stellata... 54 5e-06 UniRef50_C4V0N7 Possible flagellar basal body rod modification p... 53 7e-06 UniRef50_UPI00016996F8 flagellar basal body rod modification pro... 53 8e-06 UniRef50_Q7NXC4 Basal-body rod modification protein FlgD n=1 Tax... 53 8e-06 UniRef50_A9HHB6 Flagellar hook capping protein n=2 Tax=Acetobact... 53 1e-05 UniRef50_C0GJH6 Flagellar hook capping protein n=1 Tax=Dethiobac... 52 1e-05 UniRef50_Q8EQX6 Flagellar hook assembly protein n=1 Tax=Oceanoba... 52 1e-05 UniRef50_A1B2H8 Flagellar hook capping protein n=1 Tax=Paracoccu... 52 1e-05 UniRef50_B0THA9 Flagellar hook capping protein, putative n=1 Tax... 52 1e-05 UniRef50_C4Z5G4 Flagellar basal-body rod modification protein Fl... 52 1e-05 UniRef50_C0A7A5 Flagellar hook capping protein n=1 Tax=Opitutace... 52 2e-05 UniRef50_C8WWF2 Flagellar hook capping protein n=2 Tax=Alicyclob... 52 2e-05 UniRef50_C6WJQ5 Flagellar hook capping protein n=1 Tax=Actinosyn... 52 2e-05 UniRef50_A6W8K4 Flagellar hook capping protein n=1 Tax=Kineococc... 52 2e-05 UniRef50_C5RFU5 Flagellar hook capping protein n=1 Tax=Clostridi... 52 2e-05 UniRef50_C4L629 Flagellar hook capping protein n=1 Tax=Exiguobac... 52 2e-05 UniRef50_D2NZF9 Flagellar basal body rod modification protein n=... 51 2e-05 UniRef50_D2R532 Flagellar hook capping protein n=1 Tax=Pirellula... 51 2e-05 UniRef50_C6P7Q6 Flagellar hook capping protein n=1 Tax=Thermoana... 51 2e-05 UniRef50_B7J1L2 Flagellar hook capping protein n=21 Tax=Borrelia... 51 3e-05 UniRef50_A8RWD5 Putative uncharacterized protein n=3 Tax=Clostri... 51 3e-05 UniRef50_B9J992 Flagellar basal-body rod protein n=8 Tax=Rhizobi... 51 3e-05 UniRef50_B8FTP2 Flagellar hook capping protein n=2 Tax=Desulfito... 51 3e-05 UniRef50_A9KNF4 Flagellar hook capping protein n=1 Tax=Clostridi... 51 3e-05 UniRef50_C1TKJ1 Flagellar hook capping protein n=1 Tax=Dethiosul... 51 3e-05 UniRef50_B6R7Z3 Flagellar hook capping protein n=1 Tax=Pseudovib... 51 3e-05 UniRef50_C4G362 Putative uncharacterized protein n=1 Tax=Abiotro... 51 3e-05 UniRef50_Q18CZ5 Putative basal-body rod modification protein n=5... 51 4e-05 UniRef50_A7GGP7 Flagellar hook capping protein n=10 Tax=Clostrid... 51 4e-05 UniRef50_B9Z4U7 Flagellar basal body rod modification protein n=... 51 4e-05 UniRef50_A3DCN1 Flagellar hook capping protein n=3 Tax=Clostridi... 50 4e-05 UniRef50_A0NT13 Flagellar basal-body rod modification protein D ... 50 4e-05 UniRef50_C8RX78 Flagellar hook capping protein n=1 Tax=Rhodobact... 50 5e-05 UniRef50_C6XF41 Flagellar basal body rod modification protein n=... 50 5e-05 UniRef50_UPI0001788768 flagellar hook capping protein n=1 Tax=Ge... 50 5e-05 UniRef50_D1BD08 Flagellar hook capping protein n=1 Tax=Sanguibac... 50 6e-05 UniRef50_C1ZKQ8 Flagellar hook capping protein n=1 Tax=Planctomy... 50 7e-05 UniRef50_D0B5E2 Flagellar hook capping protein n=41 Tax=Rhizobia... 50 7e-05 UniRef50_Q1IR52 Putative basal-body rod modification protein Flg... 50 8e-05 UniRef50_B1M7H2 Flagellar hook capping protein n=2 Tax=Rhizobial... 50 9e-05 >UniRef50_Q1QW30 Flagellar hook capping protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QW30_CHRSD Length = 235 Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 103/202 (50%), Positives = 143/202 (70%), Gaps = 2/202 (0%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 DL + F+TLL+ QL+NQDPT PM+N+++T+QLAQI+TVSGI++LN +LG I+ QID ++ Sbjct: 36 DLNNRFMTLLITQLQNQDPTKPMDNSDMTAQLAQINTVSGIQELNDSLGDINEQIDAGKT 95 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 LQAS+LIG GVM+PG+TV G +E+G V TP G EL AD++ TIT+ +G VV Sbjct: 96 LQASSLIGQGVMVPGSTVRVGE-TEDGGV-VATPLGAELATGADELEITITNGSGEVVHR 153 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN 209 + +GV SF W GT DG+ G+YNV ++A GG ++ PL +ALVQGV G+ Sbjct: 154 SVEENVPSGVQSFDWPGTGLDGNAVAEGAYNVEMTARVGGEEVSVTPLNYALVQGVTSGD 213 Query: 210 SGNTLDLGTYGTTTLDEVRQII 231 +G TLDLGT + L++VRQI+ Sbjct: 214 NGPTLDLGTSDSVALEDVRQIL 235 >UniRef50_A9IKQ3 Basal-body rod modification protein FlgD n=5 Tax=Bordetella RepID=A9IKQ3_BORPD Length = 231 Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 25 GSNAAD-LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 G+N+A LQ FLTLLV QLKNQDP NPMEN ELTSQLAQISTV GI L TL +ISGQ Sbjct: 21 GANSAQSLQDRFLTLLVTQLKNQDPLNPMENAELTSQLAQISTVEGITNLKNTLLAISGQ 80 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 ID SQS+ A ++IG GV+IPG + GT + + + TPFG++LQ A KV+ I D + Sbjct: 81 IDVSQSMNAVSMIGKGVLIPGEKISLGTDASDPSKRVATPFGIDLQGDAAKVSVKILDAS 140 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALV 202 GAVVR+ ++GE GV + WDGT G +G Y V +SA++ G ++ A+ L + V Sbjct: 141 GAVVRSFELGEQDTGVLTLDWDGTNDGGQALVDGKYTVKVSATDADGKKVQAETLTYGKV 200 Query: 203 QGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V G LDLG G ++ +VR+++ Sbjct: 201 NSVSYSTDGLRLDLGLAGQISMLDVRKVL 229 >UniRef50_Q2Y9E5 Flagellar hook capping protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9E5_NITMU Length = 222 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 91/227 (40%), Positives = 135/227 (59%), Gaps = 8/227 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T PT+ + + S DLQ FL LLV Q+KNQDP NP++N ++T+QLAQI Sbjct: 4 IQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQLAQI 63 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 STV+G+E+LN T+ +I+ QSLQA+ +IG V++PG+ + G+ F Sbjct: 64 STVNGVERLNATIRTIADSFTAGQSLQAAGMIGREVLVPGSALQLANGAAR--------F 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 G+EL Q AD+V I D G ++ +++G AG WDG +DGS A NG+Y+++++ Sbjct: 116 GIELTQPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTSDGSQAANGNYSISVA 175 Query: 185 ASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 A G ++ Q L A+VQGV +GN G LD+G G L ++RQI Sbjct: 176 ALRGDQKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF 222 >UniRef50_C5CXV4 Flagellar hook capping protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXV4_VARPS Length = 228 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/216 (44%), Positives = 136/216 (62%), Gaps = 1/216 (0%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + T++SS + AD + FL LLV QL NQDP NPMEN ELTSQLAQ+STVSGIE+LNT Sbjct: 14 AATAASSAGNVSGADSEQRFLKLLVTQLNNQDPLNPMENAELTSQLAQMSTVSGIERLNT 73 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 L + Q +Q LQA++LIG+ V+ PG L+ + + G PF V+L A V Sbjct: 74 ALSGLVNQTGANQVLQAASLIGYNVLSPGNA-LSTSEPKAGEAPAAVPFAVQLPATAGTV 132 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 I + G VRT+ +G +T GV++ +WDG DGSTAP G+Y+ +++A+N GT++ A Sbjct: 133 EVKIVNAAGNTVRTLTLGPMTEGVNAVSWDGKADDGSTAPAGAYSFSVAAANNGTRVEAT 192 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 L F+ V V +G SG TL+L + + L +VR + Sbjct: 193 SLVFSQVAAVKQGASGVTLELMSGQSIGLADVRMFL 228 >UniRef50_C4KAU5 Flagellar hook capping protein n=2 Tax=Rhodocyclaceae RepID=C4KAU5_THASP Length = 224 Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/229 (41%), Positives = 133/229 (58%), Gaps = 14/229 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 IA + NT + +S+S D+ S FLTLL QLKNQDP NPMEN E+TSQLA Sbjct: 10 IAASVLAKINTREESKASAS------GDMNSRFLTLLTTQLKNQDPLNPMENAEVTSQLA 63 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+STV GIE+LN S S+QA+ L+G GV++ G + T +E GAV Sbjct: 64 QMSTVDGIERLNKMFQSFVDGQSAYDSMQAAALVGRGVLVEGKKL---TLTEAGAVG--- 117 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 G EL AAD V +I D G ++ I++ ++ AG +F WDGT +DGS A +G+Y V Sbjct: 118 --GFELDAAADSVVLSIKDAAGLEIKKIELADVKAGSQNFIWDGTASDGSRAVDGAYTVE 175 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +SA G ++ + L+F V VIRG SG +G+ G D+++QI+ Sbjct: 176 LSALAEGKKVTGRTLEFGPVTSVIRGASGTDFQVGSLGIFKYDDIKQIL 224 >UniRef50_C6P5G1 Flagellar hook capping protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5G1_9PROT Length = 220 Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 126/201 (62%), Gaps = 9/201 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FLTLLV QLKNQDP NPM+N ++TSQ+AQ+STVSGI +LN+T+ ++S + SQSLQ Sbjct: 28 QDRFLTLLVTQLKNQDPLNPMDNAQVTSQMAQLSTVSGINQLNSTVQALSASMATSQSLQ 87 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A+++IGH ++PG + G + A VEL Q AD VT TITD G VVRT+ Sbjct: 88 ATSMIGHAALVPGAQIDLLKGQSDAA--------VELAQPADNVTVTITDAKGNVVRTLP 139 Query: 152 IGELT-AGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNS 210 +G+ + AGV +F WDG G+T +GSY + +A GGT L + LV V + Sbjct: 140 LGQQSAAGVVNFQWDGKDNTGATVADGSYKFSANAVLGGTNSSPTTLSYGLVNNVSLTSG 199 Query: 211 GNTLDLGTYGTTTLDEVRQII 231 G TL +GT G L VRQ++ Sbjct: 200 GVTLGMGTLGNVGLSAVRQVL 220 >UniRef50_A4G6B2 Basal-body rod modification protein FlgD n=2 Tax=Oxalobacteraceae RepID=A4G6B2_HERAR Length = 225 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 8/212 (3%) Query: 20 SSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 +S+ S A + Q FLTLLV Q+KNQDP NP++N ++TSQLAQ+STV+GI+KLN TL S Sbjct: 22 TSAAKKSTAEEAQDRFLTLLVTQMKNQDPLNPLDNAQVTSQLAQLSTVTGIDKLNGTLES 81 Query: 80 ISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139 + G ++Q+LQA+N+IGHGV+ PG+ + + +E + GVE Q D + Sbjct: 82 MMGSYQSNQALQAANMIGHGVLAPGSNI---SLTENKGL-----MGVEFPQDVDAAEILV 133 Query: 140 TDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF 199 D G V+ TID+G AG WDGTL DGS A +GSY + AS G + A LQF Sbjct: 134 KDAAGNVIHTIDLGAHPAGTVPLLWDGTLADGSKAEDGSYQFEVKASLAGKPVSANALQF 193 Query: 200 ALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +V V G +++ G L ++RQI+ Sbjct: 194 GIVTTVSTSPGGVQINVPGLGALNLADIRQIL 225 >UniRef50_Q3SIE0 Flagellar basal-body rod modification protein FlgD n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIE0_THIDA Length = 221 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/206 (42%), Positives = 124/206 (60%), Gaps = 8/206 (3%) Query: 26 SNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQID 85 S ++D Q FL+LLVAQ+KNQDP NP++N E+TSQ+AQ+STV GIE +N +L +++ + Sbjct: 24 SGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMAQLSTVEGIENMNKSLEALASSMG 83 Query: 86 NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGA 145 SQ QA+NLIGH V++PG V G G E G EL + ADKVT I D G Sbjct: 84 ASQMSQAANLIGHAVLVPGNAV--GPGQLE------NLMGFELTRPADKVTLDIHDAGGN 135 Query: 146 VVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 +VR++D+G AGV+ WDG G+ AP G+Y+ +SA GG + L LV V Sbjct: 136 LVRSVDLGPRDAGVNVVAWDGLTGSGAVAPAGAYSFKVSAVQGGQAQSSIALNVGLVNSV 195 Query: 206 IRGNSGNTLDLGTYGTTTLDEVRQII 231 + + G L+L G+ ++R+I Sbjct: 196 SQNSEGVQLNLAGNGSVGYADIREIF 221 >UniRef50_B4EYN7 Basal-body rod modification protein n=3 Tax=Proteus RepID=B4EYN7_PROMH Length = 264 Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/264 (37%), Positives = 142/264 (53%), Gaps = 33/264 (12%) Query: 1 MSIAVTTTDPT-NTGVSTTSSSSLTGSNAAD-LQSSFLTLLVAQLKNQDPTNPMENNELT 58 M I+ + +PT NT + SS T +D ++ +FLTLL+ Q++NQDPTNPM+NNELT Sbjct: 1 MGISASMNEPTDNTIIGEAPSSYHTKKGGSDDIKGNFLTLLITQMQNQDPTNPMQNNELT 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV----------- 107 SQLAQISTV GIE LN T+ +I GQID SQ+L+A++L+ H VMI G + Sbjct: 61 SQLAQISTVEGIETLNKTVNTIVGQIDQSQALRATSLVNHMVMIAGNEISVDKINNGENA 120 Query: 108 -------------------LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 A T + + ++ FG E D +T ITD +GA VR Sbjct: 121 GSDTDIDTDTTPDTQLDKLPASTDATDNENIFSSAFGFESFSPIDTLTVNITDSSGAKVR 180 Query: 149 TIDIG-ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIR 207 TI++ ++ V+ F WD T DG+ P G Y ++A+ Q+ + L+ A+V V Sbjct: 181 TIEMNSKILPDVYHFFWDCTDDDGNKVPTGKYQFTVNATFNDAQVPVKTLKSAVVNSVSM 240 Query: 208 GNSGNTLDLGTYGTTTLDEVRQII 231 LD+G +LDE+R++ Sbjct: 241 KEGKPHLDVGLGVIVSLDEIRKVF 264 >UniRef50_C6WVA8 Flagellar hook capping protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVA8_METML Length = 224 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 117/200 (58%), Gaps = 8/200 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q F+ LLV Q++NQDP NPM+N ++TSQ+AQ+STV+GI+KLN TL ++ + QS Q Sbjct: 33 QDRFMKLLVTQMRNQDPLNPMDNAQVTSQMAQLSTVTGIDKLNNTLETLINNVQMGQSYQ 92 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 ASN+IG ++ PG TV T E G FGVEL ADKV +I D GAV+RTID Sbjct: 93 ASNMIGRNILTPGNTV--ETAGEGGY------FGVELPIGADKVKVSIKDSAGAVIRTID 144 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSG 211 +G+ G TWDG DG+ A GSY +SA+ G A L FA V + ++G Sbjct: 145 LGKQDTGTLPLTWDGLKDDGTAAATGSYKFEVSATIGTNTAEANALSFAKVLSISNYSTG 204 Query: 212 NTLDLGTYGTTTLDEVRQII 231 L+L T V++I Sbjct: 205 VKLNLSNLMTVDTSAVKEIF 224 >UniRef50_Q1GZW4 Flagellar hook capping protein n=3 Tax=cellular organisms RepID=Q1GZW4_METFK Length = 228 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/225 (38%), Positives = 132/225 (58%), Gaps = 9/225 (4%) Query: 14 GVSTTSSSSLTGSNA-------ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 G+S + SS+ GS A ++ Q F+ LL+AQ+KNQDP NPM+N E+TSQ+AQ+ST Sbjct: 6 GISDSLLSSMNGSGANNNTSAISETQDRFMKLLIAQMKNQDPLNPMDNAEVTSQMAQLST 65 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V+GIEK+N +L + + +Q+LQAS+LIG+ V++ G + EG + GV Sbjct: 66 VTGIEKMNASLSTFISSMQATQALQASSLIGNTVLVEGNSTYLAPAETEGE--SAAYLGV 123 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 EL ADK+T I + G VV+TI + AG+ S W+G DG+ P+G Y + +A+ Sbjct: 124 ELPIGADKLTVNIKNGAGNVVKTITVTNQPAGISSLGWNGYGDDGTKLPDGRYTIEATAT 183 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 G + + + PL + V V G+ G L+L T D+++QI Sbjct: 184 TGNSSVASTPLSYEQVMSVSTGSDGVKLNLSNLAAITTDQIKQIF 228 >UniRef50_C6MIR9 Flagellar hook capping protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIR9_9PROT Length = 222 Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 84/210 (40%), Positives = 121/210 (57%), Gaps = 11/210 (5%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 T +A + Q FL LL+ Q+KNQDP P++N E+TSQLAQISTV+GI+KLN+TL + Sbjct: 22 TKKDAENPQDRFLKLLITQMKNQDPLKPLDNAEVTSQLAQISTVTGIDKLNSTLQQLVSS 81 Query: 84 IDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 D+ +S++A +IGH +PG ++ L G EGA+ G+EL Q+ DK T TI D Sbjct: 82 ADDGRSIEALEMIGHSAYVPGKSITLEG----EGAIA-----GIELAQSVDKATVTILDS 132 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALV 202 +G +R +++G AGV + WDG G+ A G Y ++A G + L F V Sbjct: 133 SGIAIRKMELGVQPAGVSTIAWDGMTDSGTQAAPGDYTFEVTAKQGDKDVKVNTLSFGTV 192 Query: 203 QGVIRGNSGNTLDLG-TYGTTTLDEVRQII 231 V G G LD+G G +L +V+Q+ Sbjct: 193 NSVSHGELGTFLDMGKVLGLVSLSDVKQVF 222 >UniRef50_Q46PG2 Flagellar hook capping protein n=4 Tax=Cupriavidus RepID=Q46PG2_RALEJ Length = 226 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 15/210 (7%) Query: 26 SNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQID 85 ++AADLQS+FL +LV Q+ NQDP NPM+N +LTSQLAQISTVS ++ +N+TL + Q Sbjct: 28 ASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLTSQLAQISTVSSMQTMNSTLTQLLNQTS 87 Query: 86 NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGA 145 S+++ ++ LIG VM+PG+ G FGV+L AD VT + D +G Sbjct: 88 ASRAMDSAALIGRTVMVPGSQFSVKDG-------VAGQFGVDLPSTADAVTVNVLDAHGN 140 Query: 146 VVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 VVRTID+ TAGVH WDG G +G Y+ +SA+ GT + QP+ ALV G Sbjct: 141 VVRTIDMKGQTAGVHDIAWDGKNDAGVAVADGDYSFKVSATANGTSV--QPV--ALVYGK 196 Query: 206 IRGNSGNT----LDLGTYGTTTLDEVRQII 231 + SG++ +D+G +D+VR+I+ Sbjct: 197 VNSISGDSSGVLVDVGNGQQANVDDVRRIL 226 >UniRef50_P57421 Basal-body rod modification protein flgD n=4 Tax=Buchnera aphidicola RepID=FLGD_BUCAI Length = 236 Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 7/220 (3%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 N V ++ N DLQ +FL+LL+AQ+KNQDPT+P++N++LTSQLAQI+T SG++ Sbjct: 23 NEAVKKNDNNLPNDINPPDLQKNFLSLLIAQIKNQDPTDPIKNSDLTSQLAQINTASGMQ 82 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQA 131 KLN T+ S QI +Q++Q S LIG VM+P ++ T T FG+EL + Sbjct: 83 KLNNTVDQFSNQISKNQNIQLSTLIGRHVMVPNKKIIHTKD-------TKTQFGIELFEK 135 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQ 191 A V ITD N + + E AG H+F WDG + ++ +G YN+++ A Sbjct: 136 ATSVEIKITDDNNKTLYLKQLKETEAGRHNFFWDGQDLNKNSVMSGQYNISVIAKKNNQN 195 Query: 192 LVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + L +V +I + +DLG G T +R+I+ Sbjct: 196 IPVNSLSVGVVNSIIMSSGNAIIDLGESGQITPLSIREIL 235 >UniRef50_Q0AJ54 Flagellar hook capping protein n=2 Tax=Nitrosomonas RepID=Q0AJ54_NITEC Length = 223 Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 D+Q FL LLV Q++NQDP +PM+N E+TSQ+AQISTVSGI+KLN+TL + D +S Sbjct: 30 DMQERFLKLLVTQMQNQDPLSPMDNAEVTSQMAQISTVSGIDKLNSTLEKLVSDSDARRS 89 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 +A+N+IG V++PG + + G G EL + DK+ TI D G VR Sbjct: 90 FEAANMIGRSVLVPGADMQLENHTGIG--------GFELTEPVDKLVVTIKDSAGIAVRD 141 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN 209 ID+G AGV +F WDG +G+ A G Y+ A+ A ++ A L F V G Sbjct: 142 IDLGTQPAGVGTFAWDGLANNGNEAAGGQYSFALKAVRSNQEVAASTLAFGSVSSAQAGK 201 Query: 210 SGNTLDLGTYGTTTLDEVRQII 231 G L++G G + ++++I Sbjct: 202 EGALLEVGRLGYVGMHDIKKIF 223 >UniRef50_B2UJX2 Flagellar hook capping protein n=6 Tax=Ralstonia RepID=B2UJX2_RALPJ Length = 215 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 136/215 (63%), Gaps = 11/215 (5%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 ST +S++L+ ++ DLQ++F+ LLVAQL+NQDP NPM+N+++TSQLAQI+TV+GI++LNT Sbjct: 11 STNTSNNLSITSGTDLQNTFMQLLVAQLQNQDPLNPMDNSQMTSQLAQINTVNGIQQLNT 70 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 T+ S++ Q + + QAS+LIG V +P +T+ +GS FG+ + AD V Sbjct: 71 TMSSMATQ---NAATQASSLIGRTVQVPSSTLTLASGSAN--------FGISVPNGADDV 119 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 TI D +G VR +D+G ++AG ++TW+G G++ +G+Y++++SA+ GG A Sbjct: 120 VVTIKDASGNTVRKVDLGGMSAGSGNYTWNGKNDSGTSVADGTYSISVSATLGGKAATAN 179 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L V GV N L L + T L ++ I Sbjct: 180 ALGADKVTGVTITNGTTQLQLASGNTAKLSDITTI 214 >UniRef50_Q47I24 Flagellar hook capping protein n=2 Tax=Betaproteobacteria RepID=Q47I24_DECAR Length = 229 Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 122/203 (60%), Gaps = 9/203 (4%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 DLQ SFLT+L QLKNQDP NPM+N ++TSQLAQIST+ GI+ LNTTL S+ + SQ+ Sbjct: 35 DLQDSFLTMLTTQLKNQDPLNPMDNAQMTSQLAQISTLEGIQGLNTTLTSLLSSYNTSQA 94 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 LQA+ IG V++ G+ + +G +G GV L AA+ V TI D +G VV+T Sbjct: 95 LQAAGAIGSQVLVEGSGLALSSGISQG--------GVTLGSAANSVVVTIKDGSGKVVQT 146 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA-SNGGTQLVAQPLQFALVQGVIRG 208 ++G+ +AG +F WDG G+ +G Y +++A S GT + A P+Q V V++ Sbjct: 147 QELGKQSAGTVAFNWDGKDASGNQLSDGKYTFSVAATSAAGTAVTATPIQVGTVSAVVKS 206 Query: 209 NSGNTLDLGTYGTTTLDEVRQII 231 S L+L + T + V Q + Sbjct: 207 GSSFVLELSSGETVAFNNVLQFM 229 >UniRef50_A6GSX8 Flagellar hook capping protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX8_9BURK Length = 223 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/233 (36%), Positives = 134/233 (57%), Gaps = 12/233 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAAD-LQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M+I VT+ N+G TT++ T N+ + +Q F++LLVAQLKNQDP PM+N ++TS Sbjct: 1 MTIDVTSALGNNSG--TTAAKKKTDENSPEAIQERFMSLLVAQLKNQDPLAPMDNAQVTS 58 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQ++TV+GI LN T+ ++ I+ +Q++QA++++G V+ G + G G+ Sbjct: 59 QMAQLNTVTGINTLNATMEGVAASINANQTVQATSMLGRAVLTEGNDLKLVDGKAVGS-- 116 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 +EL Q+AD + + D VVRTI++G + G H F WDG DGST P G+Y Sbjct: 117 ------MELNQSADILRVNVLDAGANVVRTIELGPQSKGTHEFEWDGKSNDGSTLPAGNY 170 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTT-TLDEVRQII 231 I A G PL ++VQGV + T L + G+ T +++Q+ Sbjct: 171 KFEIEAKAAGKDASVTPLTLSVVQGVRNAGAEGTKLLTSNGSEITFADIKQVF 223 >UniRef50_C5V018 Flagellar hook capping protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V018_9PROT Length = 188 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/196 (39%), Positives = 119/196 (60%), Gaps = 8/196 (4%) Query: 36 LTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNL 95 + LLV QLKNQDP NPM+N ++TSQ+AQISTVSGI+KLN TL ++S + +Q+LQA+ + Sbjct: 1 MKLLVTQLKNQDPLNPMDNAQMTSQMAQISTVSGIDKLNATLQALSASMTPNQTLQAATM 60 Query: 96 IGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGEL 155 IG GV++ G + G G G EL AA+ ++TD +G ++ TID+G Sbjct: 61 IGRGVLVTGNGMDLKAGVGLG--------GFELASAAESNKVSVTDASGVLISTIDLGAQ 112 Query: 156 TAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLD 215 AG+ F WDG + G+ P+G Y A++++ + A L++ +V V +G+ G L Sbjct: 113 PAGIVKFQWDGKDSAGNVMPDGQYTFAVTSTQASNTVAATGLEYGIVGSVTQGSQGVELS 172 Query: 216 LGTYGTTTLDEVRQII 231 +G L +V+QI+ Sbjct: 173 VGQMQKVALAQVKQIL 188 >UniRef50_Q3JX26 Basal-body rod modification protein FlgD n=56 Tax=Burkholderia RepID=Q3JX26_BURP1 Length = 459 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 10/197 (5%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 N+G++ +SSL+ ++AADLQ++FL LLV QL+NQDPT+P++++++TSQLAQI+TVSGI Sbjct: 230 NSGINV--ASSLSTTSAADLQTTFLKLLVTQLQNQDPTSPVDSSQMTSQLAQINTVSGIA 287 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQA 131 +LNT L S+S Q+ Q QA+ LIG V+ PG TV +G+ +PFGV+L A Sbjct: 288 QLNTALTSLSSQLTAGQQTQAAMLIGSNVLAPGNTVPVKSGA-------ASPFGVQLTSA 340 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGT 190 +T T+ + +G VV TI+ G +AG F W T T G+ P+G+Y ++ S ++ G Sbjct: 341 VSNLTITVKNASGVVVNTINAGAQSAGTVPFNWTPTDTAGNKLPDGTYTISASYTDTSGK 400 Query: 191 QLVAQPLQFALVQGVIR 207 Q L A V VI+ Sbjct: 401 QYAPTTLSSAQVLSVIK 417 >UniRef50_C1DC22 Flagellar hook capping protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DC22_LARHH Length = 239 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 131/233 (56%), Gaps = 10/233 (4%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 +T DP G++ T++ T S A ++Q FL LL+ QL+ QDP NP++N ++TSQ+AQIS Sbjct: 10 STEDPF-AGINGTNTK--TKSEADEIQDRFLKLLITQLQTQDPLNPLDNYQMTSQMAQIS 66 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVL----AGTGSEEGAVTTT 121 +V GIEKLN+++ +++ SQ+ A+ +IGH +I G+ +L GT + Sbjct: 67 SVQGIEKLNSSVSALTEAYAASQAFAAAGMIGHVSLIEGSHMLLTYAEGTEVDADGNKIK 126 Query: 122 TPF---GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 P G+ L AD+VT + + +G +V ++ +G G+ F+WDG +DG P G Sbjct: 127 VPIAQGGISLPDGADEVTIKVYNSDGELVDSVTMGAQQPGISHFSWDGKGSDGEPLPEGM 186 Query: 179 YNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 Y+ ++ A GG A+PL FA + + N L L T + ++R+++ Sbjct: 187 YSFSVEAKKGGNTATAKPLGFARIDALTWENGSPKLILSTGQKISPSDIRELL 239 >UniRef50_C4SBL2 Flagellar hook capping protein n=4 Tax=Enterobacteriaceae RepID=C4SBL2_YERMO Length = 237 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 90/218 (41%), Positives = 128/218 (58%), Gaps = 14/218 (6%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 GSN DL +SF+TLLVAQ++NQDPTNPM+NN+LTSQLAQ ST SG+++LN+T+ ++ + Sbjct: 21 GSNPEDLTNSFMTLLVAQMQNQDPTNPMDNNQLTSQLAQFSTASGVQQLNSTVMAVGSLV 80 Query: 85 DNSQSLQASNLIGHGVMIPG-TTVLAGT------GSEEGAVTTTTPFGVELQQAADKVTA 137 + Q + A++ +G V I G ++V+ GT G EGA FG L ADKVT Sbjct: 81 TSMQQMNAADWVGRQVWIEGDSSVVNGTKESENVGEGEGAEQGNQEFGFALDSDADKVTV 140 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDG-TLTDGSTAP--NGSYNVAISASN--GGTQL 192 T+TD+ G T ++ + AGV+ T D + S P +Y V+ SA+N G T Sbjct: 141 TLTDELGNAY-TAELKNVKAGVNKLTLDDLSNFQPSELPGKGAAYKVSFSAANDDGNTPK 199 Query: 193 VAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + L+ A V GV +G L LG GT +L ++ I Sbjct: 200 ITS-LKKAKVDGVSFSPTGAVLQLGLNGTASLGDIYFI 236 >UniRef50_C5SD64 Flagellar hook capping protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD64_CHRVI Length = 236 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 117/190 (61%), Gaps = 10/190 (5%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGS-NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 S+ +T + TN+ T + ++ TGS N A QS FL L++ QL NQDPTNP+EN + SQ Sbjct: 11 SLGLTGYNTTNSTTGTAAGTASTGSGNNALGQSDFLKLMITQLTNQDPTNPVENEDFASQ 70 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSE-EGAVT 119 +AQ ST++GIE+L ++ ++S + Q+++A+ L+G V++P + G + GA Sbjct: 71 MAQFSTLTGIEELTSSFETLSKTLLQGQTVEAATLVGQSVLVPASKADVSAGQKVSGA-- 128 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 V+L +A +V+ I D G +V+T+D+G +AG+ F WDG L +GS AP G+Y Sbjct: 129 ------VDLTASATQVSVNIQDATGQLVQTLDLGNQSAGLIDFEWDGLLANGSAAPAGTY 182 Query: 180 NVAISASNGG 189 + +++A G Sbjct: 183 SFSVTAQRNG 192 >UniRef50_B2PY25 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PY25_PROST Length = 279 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 113/232 (48%), Gaps = 40/232 (17%) Query: 26 SNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQID 85 S D++ +FL ++V Q++NQDPT PMEN ELTSQLAQI+T+ + KL+ + IS QI Sbjct: 31 SQTDDMRDTFLKMIVTQMQNQDPTKPMENAELTSQLAQIATLESMNKLSDKVSGISSQIG 90 Query: 86 NSQSLQASNLIGHGVMIPGTTVLAG-----TGSEEGAVTTTT------------------ 122 + QSLQA+ L+G GV+IP ++ S+ A++ T Sbjct: 91 SGQSLQATQLVGKGVLIPRNEIVLAPLKTQNDSDNTAISKPTNPLPDDETSRALSVANDN 150 Query: 123 --------------PFGVELQQAADKVTATITDKNGAVVRTIDIG-ELTAGVHSFTWDGT 167 PFG L + AD V TI DKN A++RTI E+ ++ +WDG Sbjct: 151 GGDDDASQGDYISSPFGFFLPKMADSVEITIRDKNRAIIRTISYDTEVKPDIYDMSWDGR 210 Query: 168 LTDGSTAP--NGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLG 217 +G N Y + A + G ++ L + V GV G LD+G Sbjct: 211 DDNGKLVADTNSKYFFDVRAVSNGAEIEVTKLGYTRVNGVTPGTDAPLLDVG 262 >UniRef50_D1NZK4 Basal-body rod modification protein FlgD n=3 Tax=Providencia RepID=D1NZK4_9ENTR Length = 285 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 48/265 (18%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G + +S+ S + D++ +FLT++V Q++NQDPT PM+N +LT QLAQI+T+ + KL Sbjct: 17 GPAAVASNVPKKSQSDDMRDTFLTMIVTQMQNQDPTKPMDNADLTGQLAQIATLESMNKL 76 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGT---------------------- 111 + ++ IS QI + QSLQA+ L+G GV+IP ++ + Sbjct: 77 SDSVSGISQQIGSGQSLQATQLVGKGVLIPRNEIILASLKKESNGENSTVTKPANPLPDE 136 Query: 112 ----------------------GSEEGAV-TTTTPFGVELQQAADKVTATITDKNGAVVR 148 GSEE ++PFG L + AD V TI DKN V+R Sbjct: 137 VISANSPSNFGLSNLGANEGDEGSEEPQTDYISSPFGFFLPKLADTVEITIRDKNRTVIR 196 Query: 149 TIDI-GELTAGVHSFTWDGTLTDGSTA--PNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 TI E+ ++ WDG +G+ P G Y + A G+++ L + V GV Sbjct: 197 TISYDSEVKPDIYDMAWDGRDNNGNLVADPKGKYFFDVKAVRMGSEIEVTKLGYTRVNGV 256 Query: 206 IRGNSGNTLDLGTYGTTTLDEVRQI 230 G+ LD+G + L + ++ Sbjct: 257 TPGSDAPLLDVGIGQSVPLSSIFKV 281 >UniRef50_B9Z358 Flagellar hook capping protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z358_9NEIS Length = 230 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 109/181 (60%), Gaps = 13/181 (7%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 +Q+ FLTLL QLK+QDP NPMENNE+TSQ+AQIS V+G+E L+ ++ S+ +QSL Sbjct: 33 IQNRFLTLLTTQLKSQDPLNPMENNEITSQMAQISQVTGLENLSKSINSLLQSQYGTQSL 92 Query: 91 QASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 A++L+G MI G T+ LA G+ +G GV L +A + T+ + NG V+ T Sbjct: 93 LAASLVGKSAMIDGNTLTLAQGGTAQG--------GVILDGSAQNLAITVKNANGEVIDT 144 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG----TQLVAQPLQFALVQGV 205 + + +G+ +F WDGT DG+ A G Y +++A+N T + A+PL V V Sbjct: 145 FTMNNVDSGLTTFNWDGTDKDGNAAAAGVYTFSVAATNESNGKTTSVTAEPLSNQHVDAV 204 Query: 206 I 206 + Sbjct: 205 V 205 >UniRef50_B1XWJ6 Flagellar hook capping protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWJ6_LEPCP Length = 224 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 99/165 (60%), Gaps = 9/165 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSS---FLTLLVAQLKNQDPTNPMENNELTS 59 ++ T T TN+ S S S +GS A+ ++S FL LLVAQ++NQDP +PM+N ++TS Sbjct: 1 MSTTVTGSTNSSASIYSQLSGSGSTASTTEASADRFLKLLVAQMQNQDPLSPMDNAQVTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQI+TVSGIEK+N ++ ++ GQ Q+LQ + L+G GVM+ AG G T Sbjct: 61 QMAQINTVSGIEKVNESIQAMGGQFTQMQALQGAQLVGQGVMV------AGKGLNLDPAT 114 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTW 164 G EL AD + G V+ T+D+G T+G HSFTW Sbjct: 115 GQASAGYELAGPADAARIEVLSAAGRVIDTVDLGAETSGRHSFTW 159 >UniRef50_Q4K867 Basal-body rod modification protein FlgD n=15 Tax=Pseudomonas RepID=Q4K867_PSEF5 Length = 242 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 9/154 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL LLV QL NQ+P +P +N+ +QLAQ ST+ GI LN+++ +I+G +SQ+LQ Sbjct: 46 KDAFLKLLVTQLNNQNPLDPQDNSAFVAQLAQFSTLEGITTLNSSVNAITGNYKSSQALQ 105 Query: 92 ASNLIGHGVMIP-GTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 AS+L+G V++ GTT + + S G+VT + + + VT T+TDK+G V+TI Sbjct: 106 ASSLVGRSVIVQTGTTQVDTSKSMTGSVT--------VPSSVNSVTVTVTDKDGNTVKTI 157 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 D+G AG SF WDGT TDG+ A G+Y S Sbjct: 158 DMGSQKAGNASFVWDGTKTDGTKADPGNYTFKAS 191 >UniRef50_D0L1M4 Flagellar hook capping protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1M4_HALNC Length = 245 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/233 (34%), Positives = 134/233 (57%), Gaps = 4/233 (1%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S+ + + T +G ++TS +S G+ + D+ +SF+ LL QL+NQDPTNP +N+++ +QL Sbjct: 13 SLGLAVSSATGSGANSTSGTSGNGAESLDM-NSFMKLLTTQLQNQDPTNPTDNSQMIAQL 71 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTT 120 AQ S++ GI +LNTT+ + +SQ +QA+ L+G ++ G T + + + +G Sbjct: 72 AQFSSLQGISQLNTTVNGFQSTLQSSQIMQAAALVGKAAIVKGDTAHMYNSTAADGTTKA 131 Query: 121 TTPFG-VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 + G V++ A V+ +IT+ +G VV T + + +F+WDGT+ DGS AP G+Y Sbjct: 132 SGILGAVDIPTGATSVSVSITNASGQVVDTQSVPVSGSARPTFSWDGTMPDGSVAPAGAY 191 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDL-GTYGTTTLDEVRQII 231 V +AS G AQ A++ V +SG L+L G L +V +II Sbjct: 192 TVTANASVNGQGQAAQTYVGAVISSVGVTSSGPQLNLDGGLPPAKLSDVVEII 244 >UniRef50_C7I103 Flagellar hook capping protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I103_THIIN Length = 232 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 11/186 (5%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +F TLLV QL NQDP NPM N +L++QLAQ ST SGI+ + ++ +++ Q+ +Q LQA+ Sbjct: 39 TFYTLLVTQLTNQDPMNPMSNTDLSAQLAQFSTASGIQSMQQSMATLTAQLAQTQGLQAA 98 Query: 94 NLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 NL+G V+ ++ L +G G G L AA V + + +G V T+ + Sbjct: 99 NLVGQTVVFDNNSISLPSSGGTAG--------GFTLASAAQNVQVQVLNSSGQTVDTLQL 150 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGV-IRGNS 210 G L GV +F WDG+ + G AP G+Y +SA++G G + A P VQ V + G++ Sbjct: 151 GALPTGVQTFNWDGSTSGGQQAPAGNYTFNVSATDGTGQPVAAVPFGTGKVQSVYLNGSN 210 Query: 211 GNTLDL 216 G L + Sbjct: 211 GPALQM 216 >UniRef50_P96970 FlgD (Fragment) n=1 Tax=Proteus mirabilis RepID=P96970_PROMI Length = 182 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/157 (43%), Positives = 91/157 (57%), Gaps = 34/157 (21%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 D++ +FLTLL+ Q++NQDPTNPM+NNELTSQLAQISTV GIE LN T+ +I GQID SQ+ Sbjct: 26 DIKGNFLTLLITQMQNQDPTNPMQNNELTSQLAQISTVEGIETLNKTVNTIVGQIDQSQA 85 Query: 90 LQASNLIGHGVMIPGTTVL---------AGTGSEEGAVTTTTP----------------- 123 L+A++L+ H VMI G + AG+ ++ T TP Sbjct: 86 LRATSLVNHMVMIAGNDIYVDKSNNGENAGSDADTDIDTDKTPDTKLDPLLRSADTPDPD 145 Query: 124 --------FGVELQQAADKVTATITDKNGAVVRTIDI 152 FG E D +T ITD +GA VRTI++ Sbjct: 146 NENIFASAFGFESFSPIDTLTVNITDSSGAKVRTIEM 182 >UniRef50_Q7NU17 Basal-body rod modification protein FlgD n=1 Tax=Chromobacterium violaceum RepID=Q7NU17_CHRVO Length = 224 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 9/165 (5%) Query: 28 AADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNS 87 A LQ++FLTLL AQL QDP NPM+N++LTSQ+AQIS VSG++ LN T+ + + S Sbjct: 25 AQSLQNNFLTLLTAQLNAQDPLNPMDNSQLTSQMAQISQVSGLQSLNLTMQQLVASQNAS 84 Query: 88 QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 QS+ A+ +IG+ V++ G T+ A TT GV L A ++ DKNG VV Sbjct: 85 QSMMATGMIGNNVLVAGNTL------ASPAAGQTTQGGVMLSGPASSYQVSVLDKNGNVV 138 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS---ASNGG 189 T+ + + G+++F WDGT G P G+Y + AS GG Sbjct: 139 DTVTVANPSKGLNTFNWDGTDGKGHALPAGNYTFQVKVTQASAGG 183 >UniRef50_Q3J8L2 Flagellar hook capping protein n=2 Tax=Nitrosococcus oceani RepID=Q3J8L2_NITOC Length = 226 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL L+ AQL NQDP PM+N+ SQ+AQ TV GI+ L + +SG + ++Q+LQAS Sbjct: 35 FLKLMTAQLSNQDPFEPMDNSTFLSQVAQFGTVKGIQDLQASFQEVSGSLQSNQALQASG 94 Query: 95 LIGHGVMIP-GTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 L+G V++P + L GS GA VEL I D+ G +VRT+D+G Sbjct: 95 LVGRSVLVPSAESSLEAGGSIRGA--------VELPSGVASPQLKIFDQAGQLVRTVDLG 146 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA-SNGGTQLVAQPLQFALVQ--GVI--RG 208 G FTWDG DG+ A G Y + + GG Q FA V+ V+ G Sbjct: 147 ADQTGTVQFTWDGFKEDGTPATPGRYQFKVEGVTEGGAQGFP---TFAAVRVDSVVIGEG 203 Query: 209 NSGNTLDLGTYGTTTLDEVRQII 231 + G TL+L G+ +++QI+ Sbjct: 204 SEGLTLNLAGQGSVPFSQIKQIL 226 >UniRef50_A9BQ62 Flagellar hook capping protein n=4 Tax=cellular organisms RepID=A9BQ62_DELAS Length = 220 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/153 (43%), Positives = 99/153 (64%), Gaps = 7/153 (4%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ++ S++S + ++ A Q FL LLVAQL NQDP NPM+N ++TSQ+AQI+TV+GI++LN Sbjct: 14 INNKSATSNSTTDPAAAQDRFLKLLVAQLNNQDPMNPMDNAQMTSQMAQINTVTGIQQLN 73 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 T+ S++GQ Q LQ + +IG V+ G T+ G G E+ + T F +L+ A Sbjct: 74 KTMESMAGQFTAMQVLQGTQMIGRTVLTEGNTL--GVGKEK---SYTAAF--DLEGPAAD 126 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGT 167 V IT +G +V T+++G TAG + FTWDG+ Sbjct: 127 VKVQITTASGELVDTVELGSGTAGRNYFTWDGS 159 >UniRef50_B7VKM1 Flagellar hook capping protein FlgD n=54 Tax=Vibrionales RepID=B7VKM1_VIBSL Length = 236 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 8/184 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL+LL QL QDP P+ N+++ +Q+A +TV GI K+NT S++ + ++Q+LQ Sbjct: 39 QDDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSMTSNQALQ 98 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS+L+G V++PG AG +G + + V+L QA D V + ++ G +VRT D Sbjct: 99 ASSLVGRDVLVPGA---AGVKQGDGGMASM----VKLPQAMDNVMVRVENEVGQLVRTFD 151 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN-S 210 IG +G WDG DG+ P G YNV S G Q +A V V+ G Sbjct: 152 IGSKPSGDTRVEWDGKDEDGNPLPAGKYNVKASGLLEGENTEFQVSSYANVNSVLLGKGD 211 Query: 211 GNTL 214 GN L Sbjct: 212 GNVL 215 >UniRef50_A1WFE4 Flagellar hook capping protein n=8 Tax=Comamonadaceae RepID=A1WFE4_VEREI Length = 236 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 15/193 (7%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G++ + ++T +AA Q FL LLVAQL NQDP NP++N ++TSQ+AQI+TV+GI++L Sbjct: 32 GMTGAKAQAVTDPSAA--QDRFLKLLVAQLNNQDPMNPLDNAQMTSQIAQINTVTGIQQL 89 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAA 132 N T+ ++ Q D Q +Q + L+G VM G+ + +AG T G +L QAA Sbjct: 90 NQTMQRMAAQFDALQVMQGAALVGRSVMTEGSALSMAG---------KTGQGGFDLAQAA 140 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL 192 V I G V+ ++D+G AG H F+WD + G+T ++A+NG L Sbjct: 141 TGVKVEIMTAGGQVLDSMDLGAQDAGRHEFSWDASHYAGAT---DGLQFRVTAANGAGAL 197 Query: 193 VAQPLQFALVQGV 205 A L + + V Sbjct: 198 DATALSLSKISAV 210 >UniRef50_Q5X5U4 Flagellar basal-body rod modification protein FlgD n=6 Tax=Legionella RepID=Q5X5U4_LEGPA Length = 225 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 9/201 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL L+VAQ++NQDP P N E SQLAQ ST GI K+ +L ++ + ++Q+LQ Sbjct: 30 QQDFLRLMVAQVQNQDPLQPQANGEFLSQLAQFSTNDGITKMQESLQQLASSLQSNQALQ 89 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS L+G V++ T+ GT EG V +++ + A I ++G +++TI Sbjct: 90 ASALVGRKVLVNSNTLSLGT---EGDVKAA----IDMAPGVSNLRAAIYTESGELIKTIP 142 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSG 211 +G+ G F+WDGT +G Y + ++ + GG ++ + + A V V G +G Sbjct: 143 LGQPEPGFFQFSWDGTDQSNQRLASGRYTIKVTGTYGGQEVALKTMTSANVDSVSLGQNG 202 Query: 212 NTLDLGT--YGTTTLDEVRQI 230 L L G+ L +VRQI Sbjct: 203 EDLKLNVAGVGSVYLSQVRQI 223 >UniRef50_Q2SDU0 Flagellar hook capping protein n=4 Tax=Gammaproteobacteria RepID=Q2SDU0_HAHCH Length = 225 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 8/200 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 ++ F+ L++AQL NQ P +P +N +QLAQ S+V GI+ LN+T+ +++ Q ++Q+LQ Sbjct: 32 KNEFMDLMIAQLNNQSPLDPQDNTAFVAQLAQFSSVEGIQSLNSTVDTMASQFRSAQALQ 91 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS ++G V+ P + + S +G++ VEL ++T ++ ++ G ++ ID Sbjct: 92 ASAMVGRDVLAPMESAIK---SADGSINGV----VELPAGTSQLTISVYNEAGELITNID 144 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV-IRGNS 210 G G F+WDG ++G T P G Y V A G Q+ A V V I + Sbjct: 145 KGYQPGGDVKFSWDGKNSNGETLPAGRYEVVARARYSGEQMQVSSYLAANVDSVSIARDG 204 Query: 211 GNTLDLGTYGTTTLDEVRQI 230 G TL+L G+ L +++QI Sbjct: 205 GVTLNLAGLGSVGLSDIKQI 224 >UniRef50_B7UXB0 Flagellar basal-body rod modification protein FlgD n=6 Tax=Pseudomonas aeruginosa RepID=B7UXB0_PSEA8 Length = 237 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/225 (36%), Positives = 114/225 (50%), Gaps = 21/225 (9%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T TG S SS+L + FL LLVAQLKNQDP +P +N E +QLAQ STV G+ Sbjct: 28 TETGQSVKGSSNLG-------KDEFLKLLVAQLKNQDPMSPQQNGEFIAQLAQFSTVEGV 80 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF--GVEL 128 + LN ++ SI +SQ+LQAS+L+G V++ +++ V T F + L Sbjct: 81 QSLNKSMESILSNYQSSQALQASSLVGRKVIV---------ATDKSVVDTKDTFKASLNL 131 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 ++ V + D G VV I++G+ AG SF WDG + G+ P G+Y S Sbjct: 132 PVSSSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTSID 191 Query: 189 GTQLVAQPLQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQII 231 G Q A V V G +G L+L G+ L +V QII Sbjct: 192 GKTYGLQTYLPANVDSVTLGQNGGELMLNLAGLGSIALSKV-QII 235 >UniRef50_B9ZPV2 Flagellar hook capping protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPV2_9GAMM Length = 223 Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 9/151 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 QS FL L+ QL+NQDP PMEN E Q+AQ STV+GIE+L+ + ++ + SQ+LQ Sbjct: 29 QSDFLKLMTTQLQNQDPFEPMENGEFIGQMAQFSTVTGIEELSKSFEKLAQSMGQSQTLQ 88 Query: 92 ASNLIGHGVMIPGTTVLAGT-GSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 A++L+G V++P GT G GA VEL Q+ ++ + G +R++ Sbjct: 89 AASLVGKDVLVPTDFSELGTDGMVRGA--------VELDQSTGQLQVEVYSPTGERIRSM 140 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 ++G + G+ FTWDG DG+ A G Y Sbjct: 141 NLGSASEGLQEFTWDGMRDDGTPAAPGVYEF 171 >UniRef50_B4SIL9 Flagellar hook capping protein n=13 Tax=Xanthomonadaceae RepID=B4SIL9_STRM5 Length = 227 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 12/219 (5%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G++ +S++ N D Q+ FL L+ QL++QDP PM+N ++ +Q+AQ+STV GI L Sbjct: 18 GLNAPNSNATKKKNTLD-QADFLRLMTEQLQHQDPLKPMDNTQMVAQMAQMSTVQGITDL 76 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTT-VLAGTGSEEGAVTTTTPFGVELQQAA 132 N T+ + + Q L+ + L+GH V++P VL G+ EG V AA Sbjct: 77 NKTVKGFQESMASDQVLRGAALVGHEVLVPSEKLVLEKEGTVEGTVAAP---------AA 127 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN-VAISASNGGTQ 191 VT ITD NGA V ++ + AG +F WDG +G G Y+ VA G Sbjct: 128 GIVTVDITDANGAKVTSLSVEAKAAGETAFKWDGKDANGKRMEPGKYSIVANHVDTAGKS 187 Query: 192 LVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A V+ V G+ G L+L GT +D V ++ Sbjct: 188 TKLSTFVQAPVESVTVGSDGLYLNLKGLGTAPIDYVLRV 226 >UniRef50_Q5R0P5 Flagellar hook capping protein n=2 Tax=Idiomarina RepID=Q5R0P5_IDILO Length = 227 Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q F LL QL QDP+ P+EN+++ +Q+ + GI L+ + + ++Q+LQ Sbjct: 34 QEDFFRLLTEQLSMQDPSKPVENDQMIAQMTNFTMAEGITGLSERFDQFASDMTSNQALQ 93 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVT--TTTPFGVELQQAADKVTATITDKNGAVVRT 149 AS ++G V++P TG+ VT TP Q+A V I D GA V+T Sbjct: 94 ASTMVGRKVLVPTDQANLETGA---GVTGMIATP------QSAQNVKINIKDSTGATVKT 144 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-ALVQGV-IR 207 I+IG++ G F WDG + +G AP G+Y+ +++A GG + P+Q A VQ V Sbjct: 145 IEIGDMPQGTKEFEWDGKMANGDEAPAGNYSFSVNAQVGG-KTEELPIQMHARVQSVSTG 203 Query: 208 GNSGNTLDLGTYGTTTLDEVRQI 230 G+ G L+L G L +V +I Sbjct: 204 GDRGVVLNLKGLGGIKLSDVTEI 226 >UniRef50_Q6AJT4 Related to basal-body rod modification protein (FlgD) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJT4_DESPS Length = 248 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Query: 21 SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI 80 S ++G N+ + FLTLLVAQL+NQDP NP E E T+QLAQ S++ + +N +G++ Sbjct: 23 SLVSGKNSTMGKQEFLTLLVAQLQNQDPLNPDEGTEFTAQLAQFSSLEQLMSINKGMGNM 82 Query: 81 SGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139 NS ++ N IG V+ G + G E FG L + A V + Sbjct: 83 ITSTSNSDNIALLNTIGKEVLYYGDEIDFQGDPVE---------FGYMLAENATSVKIEL 133 Query: 140 TDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF 199 NG V +ID EL+ G H+FTWDG DG+ A +G+Y + ++A ++A P+ Sbjct: 134 R-LNGETVHSIDSTELSKGDHTFTWDGMTEDGNPAAHGAYKIVVAAQGAKNAIIAPPIIK 192 Query: 200 ALVQGV 205 + V GV Sbjct: 193 SKVTGV 198 >UniRef50_B8GQB0 Flagellar hook capping protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQB0_THISH Length = 226 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 102/203 (50%), Gaps = 14/203 (6%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 QS FL L++ QL+NQDP PME+ E QLAQ TVSGIE L + S I + Q+LQ Sbjct: 33 QSDFLRLMITQLENQDPFKPMESGEFLGQLAQFGTVSGIEDLQKSFNRFSQSIASGQALQ 92 Query: 92 ASNLIGHGVMIPGTTVLAGTGS-EEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 A+ L+ V +PG ++ GAV A+ +V + ++ G +VR I Sbjct: 93 AAALVDRHVTVPGDMIIMDPAEGMRGAVQVP---------ASAEVVIGVYNQAGQLVRRI 143 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIRGN 209 +G AG+ F WDG G+ G Y A AS+G GT+ + L A V+ V GN Sbjct: 144 PMGIQEAGLREFHWDGRDETGTLLAPGIYEFAGLASDGRGTEALDMHLS-ARVESVSLGN 202 Query: 210 SGNTLDLGT--YGTTTLDEVRQI 230 + L L G ++VRQI Sbjct: 203 NNGALLLQVEGMGEVNFNKVRQI 225 >UniRef50_C6BXM0 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM0_DESAD Length = 220 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 7/154 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL L V QLKNQDP NPM+N E +QLAQ STV + ++ + ++ ++ L Sbjct: 26 KDAFLKLFVTQLKNQDPVNPMDNKEQLAQLAQFSTVERLTNISKAMDGLTKTVNAMMGLN 85 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A+ IG VM G V S++G+ ++ + L A V I DK+G ++R+++ Sbjct: 86 ATGYIGKTVMAKGFGV-----SKKGSDISSA--NISLPAACKTVYVDIYDKDGGLIRSVE 138 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 +G AG F WDG +G+ A +G YN+AI A Sbjct: 139 LGSKDAGKFDFKWDGKDKNGNDAEDGQYNIAIRA 172 >UniRef50_A7K5D2 Flagellar basal-body rod modification protein FlgD n=11 Tax=Vibrionaceae RepID=A7K5D2_VIBSE Length = 236 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 7/153 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL+LL QL QDP P+ N+++ +Q+A +TV GI K+NT S++ + ++Q+LQ Sbjct: 39 QEDFLSLLTKQLSQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSMTSNQALQ 98 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS+L+G V++PG AG ++ + V+L Q+ D + + D+ G +VRT + Sbjct: 99 ASSLVGRDVLVPGA---AGVKQDDAPMAAM----VKLSQSIDNLFVRVEDEAGQLVRTFE 151 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 +G AG WDG G+ P G Y V S Sbjct: 152 VGAKPAGDTRVLWDGKDESGNPLPAGKYKVKAS 184 >UniRef50_A2SKD5 Flagellar hook capping protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SKD5_METPP Length = 217 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/147 (47%), Positives = 92/147 (62%), Gaps = 10/147 (6%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 D FL LLV Q+KNQDP NPM+N ++TSQ+AQI+TV+GI LN T+ S+S Q+ +SQ Sbjct: 27 DGSERFLKLLVTQMKNQDPMNPMDNAQVTSQIAQINTVTGISTLNQTVKSLSSQMLSSQV 86 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 LQ + L+GH V++ G+ + G E+G TT G EL AAD V I +G VV T Sbjct: 87 LQGAGLVGHTVLMAGSKLHFG---EDG----TTAGGFELANAADSVKVEILSPSGRVVDT 139 Query: 150 IDIGELTAGVHSFTW---DGTLTDGST 173 I++G +AG F W GT TDG T Sbjct: 140 INMGAASAGRSGFEWTAPTGTSTDGMT 166 >UniRef50_A6DYV3 Flagellar scaffolding protein FlgD n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYV3_9RHOB Length = 225 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 110/203 (54%), Gaps = 16/203 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL L+ AQL+NQDP PMEN E +Q+AQ STV+G++++NTTL I QI ++ Sbjct: 34 QQDFLALMTAQLQNQDPFAPMENGEFLAQMAQFSTVAGLDRVNTTLSDIGSQIGGNRIAT 93 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV-ELQQAADKVTATITD-KNGAVVRT 149 AS+L+G V++PG+ LA + G GV +L +AA VT ++ + GA + Sbjct: 94 ASSLLGQQVLVPGS--LARPDASGGV------HGVADLPEAASAVTVIYSNAETGAELHR 145 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV--IR 207 D+G AG+ F WDG L A G+ VAI +G T A+P +A V GV Sbjct: 146 KDMGAQPAGLMGFDWDG-LPPEIVAARGAVRVAIEV-DGDTP--AEPFVYARVVGVQMPE 201 Query: 208 GNSGNTLDLGTYGTTTLDEVRQI 230 G TL + YG + E+ I Sbjct: 202 GGQDMTLRVEDYGLRSSLEITDI 224 >UniRef50_Q485P4 Basal-body rod modification protein FlgD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485P4_COLP3 Length = 256 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 9/160 (5%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 GS QS F LL +L NQDPT P++NN++ SQ+ ST G+ LN + GS +G + Sbjct: 51 GSEGMLTQSDFFALLTKELANQDPTKPVDNNQMISQMTAFSTTDGVRTLNDSFGSFAGSM 110 Query: 85 DNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 +SQ+LQAS+L+G V++ +A + +G + + P A V + + Sbjct: 111 TSSQALQASSLVGRSVLVEDNVFGMAEGEAVKGKLVSDKP--------ASNVKIYVENVA 162 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 G V++T+ +G++ AG +FTWDG G A G+Y I Sbjct: 163 GEVIQTVPVGDVKAGGFTFTWDGQTAKGEPAEAGAYRFRI 202 >UniRef50_A1WUE3 Flagellar hook capping protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUE3_HALHL Length = 293 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 9/201 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 FL L++ QL+NQDPT+P + ++ Q+AQ +T SGIE+L + + + QSL+ Sbjct: 99 HEDFLELMMVQLQNQDPTDPQDTEQMMGQIAQFTTASGIEQLQSDFREFFEHMRSDQSLR 158 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS L+G V+ T E+G + ++L+++A +T I + G V Sbjct: 159 ASQLVGREVV---TESRQAYLPEDGEMEAL----LQLERSAPNLTVEIENAAGERVHREQ 211 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSG 211 +GE+ G H F WDGT DG P G+Y V +G + L A V V G G Sbjct: 212 LGEMEEGEHPFAWDGTNNDGQRLPQGTYQVNAYVEDGDEREPVPTLVGAPVTSVSVGMDG 271 Query: 212 NTLDLGT--YGTTTLDEVRQI 230 +L G +L +V++I Sbjct: 272 RPPELSVAGLGEMSLSDVKRI 292 >UniRef50_D2L1Z4 Flagellar hook capping protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1Z4_9DELT Length = 235 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 8/187 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q +FL LLV QL+ QDP NPM++ E ++LAQ S++ + ++NT + +++ Q Q L Sbjct: 30 QDAFLQLLVTQLQYQDPLNPMDDKEFVAELAQFSSLEQLTEINTGIDNLAIQGTQQQLLG 89 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A N IG + G V G + AVT T P A+ + D +G VVRT+D Sbjct: 90 AVNFIGKTIEATGNAVSLADG-KASAVTFTLP------TDAETCLVNVLDTSGQVVRTVD 142 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-ALVQGVIRGNS 210 +G TAG F WDG +G+T +G Y VA++A++ + L+ VQG+ + N Sbjct: 143 LGATTAGAVEFVWDGKDYNGNTMDDGQYQVAMTATDADSGLIKTSSTMTGTVQGIAQENG 202 Query: 211 GNTLDLG 217 L++G Sbjct: 203 TYYLNIG 209 >UniRef50_C6NWL0 Flagellar basal-body rod modification protein FlgD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWL0_9GAMM Length = 231 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 10/199 (5%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 F LLV QL NQDP NP+ N +L++QLAQ S +G++ + ++L + QI+ +Q LQA++ Sbjct: 41 FYNLLVTQLTNQDPLNPLSNQDLSAQLAQFSVANGVQAIQSSLTGLMSQINQNQGLQAAS 100 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 LIG V G + GS A +P A+ V + + G V + G Sbjct: 101 LIGKSVTTSGNRLQLSDGSATAAYDLASP--------ANSVNVLVQNTAGQTVAVLPQGP 152 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA-LVQGVIRGNSGNT 213 AG+ SF+W+G G+ P G+Y ++ A+ Q V+ + +VQ V G+SG T Sbjct: 153 QGAGLQSFSWNGQDNQGNPLPAGAYQFSVQATGANGQPVSSTSYMSGVVQSVTLGSSGPT 212 Query: 214 LDL-GTYGTTTLDEVRQII 231 L L G G+ + V+ I+ Sbjct: 213 LHLSGVDGSVPFNAVQNIL 231 >UniRef50_Q0AA88 Flagellar hook capping protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AA88_ALHEH Length = 222 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 10/202 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL L++ QL+NQDP NPME+ E SQ+A +T SG+++L + + +Q+LQ Sbjct: 27 QDDFLKLMITQLQNQDPMNPMESGEFMSQIASFTTASGMDQLQKSFSEFQQDMRANQALQ 86 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A++L+G V++ AG +G +T V+L A I + G VRT+ Sbjct: 87 AASLVGREVLV---ETDAGRLPADGEMTGI----VQLPSAVANANIHIHNAAGERVRTLA 139 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVI---RG 208 GE +G + F WDG DG T P G+Y V S G + + + A V V Sbjct: 140 TGEQPSGDYRFAWDGRADDGRTLPPGAYRVTASTQVEGEERSLRVMNSAPVVSVTLAGEN 199 Query: 209 NSGNTLDLGTYGTTTLDEVRQI 230 G ++L G L ++R++ Sbjct: 200 ERGPRVNLDGIGEMALSDIRRV 221 >UniRef50_Q2NR91 Putative flagellar hook formation protein FlgD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NR91_SODGM Length = 138 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 59/105 (56%), Positives = 81/105 (77%), Gaps = 5/105 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+AV + ++ + +++SS ++ADLQ++FLTLLVAQL+NQDPTNP++N ELT+Q Sbjct: 1 MSLAVNLNETASSASAASTTSSSGSESSADLQNNFLTLLVAQLRNQDPTNPLDNAELTTQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGT 105 LAQIS +S IE LNT LGSIS SQ+LQA+ L+GHGVM+ G+ Sbjct: 61 LAQISILSSIENLNTMLGSIS-----SQNLQATTLVGHGVMVDGS 100 >UniRef50_D1U8I5 Flagellar hook capping protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U8I5_9DELT Length = 247 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 7/162 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q+ FLTLLVAQL +QDP NPM++ ++TSQLAQ S++ + K+N + S++ + S L Sbjct: 32 QADFLTLLVAQLTHQDPLNPMQDTDMTSQLAQFSSLEQLTKINDGVQSLNTVMGKSDLLS 91 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A++ IG + G + G+ A T FG ++ ++ I D GA+VRT++ Sbjct: 92 AASYIGKDIKAEGYKISVAEGN---ASTIYYGFG----ESVTEIFMNIYDSEGAIVRTVE 144 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV 193 +G AG + + WDG G+ +G+Y V I + G + V Sbjct: 145 LGSKEAGTYQYKWDGRDESGNLVDDGTYGVGILGKDAGGKAV 186 >UniRef50_Q2NX18 Flagellar basal-body rod modification protein FlgD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NX18_SODGM Length = 269 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 21/208 (10%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 +L +FL +++AQ+KNQDPTNPM+NN+L SQ+AQ+ G+EKLN T+ + +++ Q+ Sbjct: 69 ELMDNFLQMMLAQIKNQDPTNPMDNNQLASQMAQMHVALGVEKLNNTVLGMGNMVNSVQA 128 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 + SN +G V+I G ++ G T +G EL AD+V T TD+ G T Sbjct: 129 VNLSNWVGRTVLIVGKPSVSFEGQ--------TAYGFELPSGADEVRVTFTDEQGKTY-T 179 Query: 150 IDIGELTAGVHSFTWDGTLT---------DGSTAPNGSYNVAISASNGG-TQLVAQPLQF 199 D ++ G + T T D A + Y+V+I A N ++ L+ Sbjct: 180 QDYKDVKPGAYKLDICKTQTMPPIVLSPLDDEKAKH--YDVSIEAKNKDESRPTVNALKA 237 Query: 200 ALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 A V+ V N L LG G+ L +V Sbjct: 238 AKVENVFFSNGSAKLALGLDGSIYLKDV 265 >UniRef50_A4BQE9 Flagellar basal body rod modification protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQE9_9GAMM Length = 221 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 12/202 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL ++VAQL+NQ+P PM N E +Q+AQ ++ SGIE+L ++ + + ++ +LQ Sbjct: 28 QDDFLKMMVAQLQNQNPLKPMSNGEFLTQIAQFTSASGIEQLQSSFQAFQTNMQSNLALQ 87 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTT--TTPFGVELQQAADKVTATITDKNGAVVRT 149 A++L+G V++ SE+G + T V L A +T + D+ G VRT Sbjct: 88 AASLVGRQVVVQ---------SEQGYLPAGGTMDATVHLPSAVRNLTVAVLDEAGQRVRT 138 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN 209 +++G G + +WDG TDG P G Y + + G + Q A V V G Sbjct: 139 LELGPQPTGDAALSWDGHDTDGKRMPAGRYRLQAQSELDGQTVALQTRTAATVDSVTLGT 198 Query: 210 SGN-TLDLGTYGTTTLDEVRQI 230 N L+L G +LD + ++ Sbjct: 199 DQNLELNLTGLGAVSLDAITEV 220 >UniRef50_Q6MHY7 Basal-body rod modification protein flgD n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHY7_BDEBA Length = 334 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 8/200 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +F L++ Q+KNQDPTNP++++E+ +QLA S++ ++ +N +L + S++ Q Sbjct: 70 KDAFFKLMLTQMKNQDPTNPLKSHEMAAQLASFSSLEQMQNMNKSLDEMKNGQKPSENFQ 129 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A NLIG V + V+ GT E T P AA +V+ + D G VVRT + Sbjct: 130 ALNLIGKAVAGDSSKVVRGTNDREHDFKFTLPM------AASEVSVKVRDAEGNVVRTYN 183 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-ALVQGVIRGNS 210 + L AG + TW+G A G Y A + + F ++ GV N Sbjct: 184 LKSLKAGENKLTWNGEDEKAMKALPGEYQFIAEAKTADGKKMGIKTDFDGMITGVSYSNE 243 Query: 211 GNTLDLGTYGTTTLDEVRQI 230 G L +G D V++I Sbjct: 244 GPVLHVGNQAIRFSD-VKKI 262 >UniRef50_A6FHZ1 Flagellar basal body rod modification protein n=1 Tax=Moritella sp. PE36 RepID=A6FHZ1_9GAMM Length = 237 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q F +LL +L QDP P+EN+E+ +Q+A +T GI + + ++ + ++Q+LQ Sbjct: 38 QEDFFSLLTQELAFQDPFKPVENSEMVAQMASFTTADGIANMGSKFEQLTTIMSSNQALQ 97 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS+L+G V+ P +T G + +EL Q A + I ++ G V+ I+ Sbjct: 98 ASSLVGTKVLAPASTAFLSAGE-------SVSGRIELPQNAPNLRLQIANQVGEVINVIN 150 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSG 211 +GE G +F WDGT +G+ GSY + SAS G AQ L+ + Q V N G Sbjct: 151 LGEQKGGPVAFEWDGTDMNGNKVAEGSYRLKASASIDGN---AQDLKVSSFQHVESVNIG 207 Query: 212 NT-----LDLGTYGTTTLDEVRQI 230 NT L+L G+ L + +I Sbjct: 208 NTGGGIILNLKGMGSLPLSQATEI 231 >UniRef50_C4XMS4 Flagellar basal-body rod modification protein FlgD n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMS4_DESMR Length = 232 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 7/154 (4%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL LLV QL+ QDP +PM++ E ++LAQ S++ + ++N+ + +S Q + A Sbjct: 31 AFLQLLVTQLQYQDPLDPMDDKEFVAELAQFSSLEQLTEINSGIEGLSTLTQEQQMIGAV 90 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 N IG + GT V E+GA T+ T L + A + D +G +VRT+D+G Sbjct: 91 NFIGKTIEANGTAV----NVEDGAATSVT---FTLPEDAATCLVNVLDSSGNIVRTVDLG 143 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 TAG F WDG DG+ +G Y VA++A+N Sbjct: 144 ATTAGQVEFEWDGKDYDGNAVDDGQYQVAVTATN 177 >UniRef50_Q8D3G1 FlgD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3G1_WIGBR Length = 279 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 18/201 (8%) Query: 26 SNAADLQS---SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 +N+ +LQS +FL +++ Q+KNQDPT+P++NN LT+Q+ Q+ T GIEKLN ++ I Sbjct: 74 NNSNNLQSLTDNFLKMILVQIKNQDPTHPIDNNHLTTQMTQMHTALGIEKLNKSIQEIKQ 133 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 ++NSQ + SN IG VMI G +++ G+ T +G +L +D V T+TD Sbjct: 134 TMNNSQYINLSNWIGKTVMIEGNPIISFNGN--------TNYGFQLSTKSDNVFLTLTDL 185 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-----GSYNVAISA-SNGGTQLVAQP 196 G + + L +GV+ T+ + N ++ V A +N G + + Sbjct: 186 EGNIYKE-QFKNLKSGVYKLNIKNANTNPAINENFPESRKTFKVNFEAINNDGNRPDIRS 244 Query: 197 LQFALVQGVIRGNSGNTLDLG 217 L+ + VI N + L LG Sbjct: 245 LKSETINNVIFKNGSSKLSLG 265 >UniRef50_A4SL11 Flagellar hook capping protein FlgD n=3 Tax=Aeromonas RepID=A4SL11_AERS4 Length = 242 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q+SFL LL QL QDP P++N ++ SQ+ +ST GI L+T +G+++ + +SQ+LQ Sbjct: 30 QASFLKLLTMQLSYQDPFKPVDNAQMLSQMTSMSTSEGINSLSTQMGNLNTLMTSSQALQ 89 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS L+G V++ G EG++ GVE + + K+ T+ D+ G V++ Sbjct: 90 ASALVGQNVLLQSNV---GFLENEGSIGGVVAVGVENKYTSVKI--TVEDEKGQVIKEFA 144 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN--GGTQLVAQPLQFALVQGVIRGN 209 + G FTWDG +G +G Y + + +N G ++ +A + V V+ GN Sbjct: 145 LEGDQKGNVEFTWDGKDKNGEPVASGKYVLKANGNNSEGKSESIA-TFAYGKVDSVVLGN 203 Query: 210 SGN--TLDLGTYGTTTLDEVRQI 230 N L+L GTTTL+ + QI Sbjct: 204 GTNPTQLNLKGLGTTTLNSILQI 226 >UniRef50_Q0FMJ5 Flagellar hook capping protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FMJ5_9RHOB Length = 223 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 14/221 (6%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 TG TT+SSS+ S ++ SF+TLL AQ++NQ+P PM++ SQLAQ+S V Sbjct: 12 TGAGTTASSSM--SQLSEDYESFITLLTAQIQNQNPLEPMDSTTFISQLAQLSQVEQSVA 69 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 +N L IS Q+ + ++ NLIG V+ P + G GA + E A Sbjct: 70 VNDNLEGISSQLSSMSAIAGLNLIGRSVVAPTEQLALEAG---GAAVASYRLAGE----A 122 Query: 133 DKVTATITDKNGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSYNVAISASN-GGT 190 V+ +I +G ++R+ D +AG +H+ TWDG +G P GSY + +SAS+ G Sbjct: 123 SNVSMSIVSADGTLLRSFDGLSGSAGELHNVTWDGMDYEGLPLPEGSYYMVVSASDAAGN 182 Query: 191 QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTT---TLDEVR 228 + AQ + V G+ N TL + GTT ++E+R Sbjct: 183 SVPAQTYAASRVTGMTYENGLATLQMAHGGTTLAGLIEEIR 223 >UniRef50_Q1ZFB9 Flagellar basal body rod modification protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZFB9_9GAMM Length = 232 Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 15/152 (9%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q F LL QL QDP P++N+E+ +Q+A +T GI K+ + G + +SQ+L+ Sbjct: 35 QEDFFALLSQQLAYQDPFKPVDNSEMIAQMASFTTAEGITKMGNEFAGLKGVLSSSQALE 94 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEE----GAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 AS+L+G V+IP T G E+ G+++T T A V + DKNGAVV Sbjct: 95 ASSLVGKKVLIPSDT---GYSMEDKGLSGSLSTKT--------GAYSVMVDVQDKNGAVV 143 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 +T+ +G++ G F WDG + G G Y Sbjct: 144 KTLTLGDIDTGNQRFNWDGLDSQGKRVAPGKY 175 >UniRef50_A9BEX8 Flagellar hook capping protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEX8_PETMO Length = 220 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 17/167 (10%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ--- 88 + +FL LLV +L+NQDPT PMEN +L +QL+Q+S+ I T + ++ NSQ Sbjct: 29 KEAFLELLVTELQNQDPTQPMENKDLVAQLSQLSSTEQI----TNMSQAIQEMVNSQMSL 84 Query: 89 -SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 LQA++LIG V++ T+ +G EG +G++ +V I D G VV Sbjct: 85 NKLQAASLIGKTVVVNDNTIDLQSGVAEG-----LNYGLD---NGSQVYLEIYDSKGQVV 136 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 T D+G AG+HS+ W G DG+ P+G Y I G Q+VA Sbjct: 137 YTEDLGVQEAGLHSYVWSGRNNDGTMMPDGEYLYGIYTVENG-QMVA 182 >UniRef50_B8DS26 Flagellar hook capping protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS26_DESVM Length = 222 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL LL+A+L+NQDPTNP +N E+ +Q+A STV + LN T SI + A Sbjct: 27 AFLQLLIAELQNQDPTNPTDNTEMINQIASFSTVEQLSALNDTATSIYDSLTAMSLNSAV 86 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 + IG V+ G + S+ TT F L+ A +TA + + +G ++ ++ +G Sbjct: 87 SFIGQSVLAQGDDI-----SKTDDATTVVSF--TLESDAQTLTAHVYNSSGTIINSVSLG 139 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGN 212 +G +SF+WDGT G+ A NG+Y+V A + G L + V GV N Sbjct: 140 ASDSGTYSFSWDGTNYTGAEAANGTYSVVFEAYDEDGDSLEVSTMVAGTVSGVSVENGTT 199 Query: 213 TLDLGTYGTTTLDEVRQII 231 L L T L++V ++ Sbjct: 200 VLTLSDGRTVNLEDVYSVV 218 >UniRef50_A8TLX1 Flagellar hook capping protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLX1_9PROT Length = 222 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 82/159 (51%), Gaps = 12/159 (7%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS- 93 FLTLL QLKNQDP +PM+N+E+ +QL Q S V N L + + NSQS +S Sbjct: 28 FLTLLTTQLKNQDPLDPMDNSEMVNQLVQFSNVEQQIAQNKNLEQMILLL-NSQSAASSV 86 Query: 94 NLIGHGVMI-PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 + IG V TTV GT FG + A+ V I D +G ++RT+D Sbjct: 87 SYIGRDVQFTDSTTVYDGTKP--------VTFGYTPTKTAESVKIDIADADGKIIRTVD- 137 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQ 191 GE +A H+F WDG DG+ AP G Y + A + + Sbjct: 138 GERSASRHTFVWDGLDKDGAAAPAGQYTFLVKAKDASDK 176 >UniRef50_Q3A5C3 Flagellar hook initiation protein FlgD n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5C3_PELCD Length = 218 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 109/221 (49%), Gaps = 13/221 (5%) Query: 13 TGVSTTSSSSLTGS--NAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 T V+ T+SSS+TGS +++L + FL LLV QL+NQDP NP + E TSQLAQ S++ Sbjct: 5 TDVNQTASSSMTGSLTGSSNLGKDDFLLLLVTQLQNQDPLNPQDPTEFTSQLAQYSSLEQ 64 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 + +N L + N + A L+G V++ + G T G +L Sbjct: 65 LFTVNDQLQQLETTNGNVVQMTALGLMGQDVVVQSDSFKLGG--------TPVTLGYDLS 116 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 D+V + + G V T++ +L+AG H W+GT +G++ P G Y + ISA G Sbjct: 117 NNVDEVQLVVQNAKGQTVATLEGTDLSAGEHFIQWNGTDANGASLPAGDYQLQISARRDG 176 Query: 190 TQLVAQPLQFALVQGVIRGNSGNTL--DLGTYGTTTLDEVR 228 PL V GV +TL LG Y + + VR Sbjct: 177 ETASGSPLVKTAVSGVDLNGGSSTLVTSLGEYNLSKVTSVR 217 >UniRef50_Q21IK8 Flagellar hook capping protein n=4 Tax=Gammaproteobacteria RepID=Q21IK8_SACD2 Length = 238 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 24/214 (11%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 QS+FL L++ QL+NQDP +P EN+E +QLAQ S+V ++KLN S + +Q+LQ Sbjct: 32 QSAFLELMITQLENQDPLSPQENSEFIAQLAQFSSVESLDKLNNNFDSFANSFVANQALQ 91 Query: 92 ASNLIGHGVMIPG--TTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 AS L+G V +P T + AG G V+ + V++ ++ + I+ + G++V Sbjct: 92 ASTLVGRSVTVPSDRTELKAG-----GVVSAS----VDVPSSSGDILVNISTEGGSLVDQ 142 Query: 150 IDIGELTAGVHSFTWDGT-------LTDGSTA-----PNGSYNVAISASNGGTQLVAQPL 197 I +G AG WDG L D T+ P G+Y +S G ++ Sbjct: 143 ISLGVRPAGELVMRWDGNQMEVNGELLDWQTSQENGIPPGTYRFDVSTRVDGEEVKLGTA 202 Query: 198 QFALVQGVIRG-NSGNTLDLGTYGTTTLDEVRQI 230 A V V G N G TL+L G LD+++Q Sbjct: 203 LSANVNSVTVGTNGGLTLNLAGIGAVGLDDIKQF 236 >UniRef50_Q1JZT2 Flagellar hook capping protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZT2_DESAC Length = 222 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 11/212 (5%) Query: 19 SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLG 78 SS+ +G+NA Q FLTL+V QLKNQDP NP + E T+QLAQ S++ + +N L Sbjct: 18 SSALSSGANALGKQD-FLTLMVEQLKNQDPMNPSDATEFTAQLAQFSSLEQLFNVNDNLE 76 Query: 79 SISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT 138 S+ Q L A LIG V + ++ +G GAV FG +L A + + Sbjct: 77 SMGNTSAEVQRLSALALIGTDV-VTASSEFEFSG---GAV----QFGYDLDGPASEGSLY 128 Query: 139 ITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ 198 I + G V T ++ E +G H WDGT +G P+G+Y + +SA NG + A + Sbjct: 129 IRNAAGDTVATYELTETGSGRHFLAWDGTDNNGKALPDGTYTLGVSAFNGDDAVAATSMI 188 Query: 199 FALVQGVIRGNSGNTL--DLGTYGTTTLDEVR 228 + V GV + + L D G + ++ VR Sbjct: 189 RSRVVGVDLVDGADVLVTDSGNFSLAEVESVR 220 >UniRef50_C8WYV7 Flagellar hook capping protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYV7_DESRD Length = 227 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 97/200 (48%), Gaps = 10/200 (5%) Query: 17 TTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + S TGS L + FL LLV QL+NQDP NP + E+T+QLAQ S++ + ++ Sbjct: 15 SVQSPERTGSQDDSLGKMDFLNLLVTQLENQDPMNPSDPTEMTAQLAQFSSLEQLTNISE 74 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 ++ + + A +++G V + G T T E G L++AA+ V Sbjct: 75 SMEGLDAMKTAYEQNAALSMLGRNVQLEGNTF---TFQNE-----PVQLGYNLERAAESV 126 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVA 194 I D +G V TI + T G H+ WDGT DG + P G Y + A + GG L Sbjct: 127 EIQIMDASGKTVDTIKGLQGTVGEHTVQWDGTDADGKSVPAGEYQFVVGAQDAGGNVLQP 186 Query: 195 QPLQFALVQGVIRGNSGNTL 214 P A VQGV G+ G L Sbjct: 187 TPQVMAKVQGVDYGSGGQKL 206 >UniRef50_D0MGC4 Flagellar hook capping protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGC4_RHOM4 Length = 230 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 19/211 (9%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 + +T S+ S D + +FL LLV QL+ QDP NP+++ E +QLAQ STV + +N Sbjct: 16 LQSTPSAPAPPSQELD-KEAFLRLLVTQLRYQDPINPLDSREFAAQLAQFSTVEQLIGIN 74 Query: 75 TTLGSISGQIDNSQSLQ-------ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 TL + Q D +L A+ L+G + G + G PF +E Sbjct: 75 ETLAA---QSDAYAALAQGIHNSVAAGLVGKVIEAEGDRLTWGG-------EDPVPFRIE 124 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 L AA +V+ I ++ G VVRTI +G AG H+ WDG G P G+Y + + A++ Sbjct: 125 LGDAAQQVSIQIRNEAGEVVRTIFLGSKAAGEHAVEWDGKNDAGEALPAGTYTIEVLATD 184 Query: 188 G-GTQLVAQPLQFALVQGVIRGNSGNTLDLG 217 G + A+ V V G G L +G Sbjct: 185 ADGDPVAARSFVRGRVTRVTFGPEGILLWIG 215 >UniRef50_Q2RZC4 Basal-body rod modification protein FlgD n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZC4_SALRD Length = 260 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 19/175 (10%) Query: 22 SLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV------SG-IEKL 73 +L+ + +A+L ++ FL LL QL+NQDP+NPM+ + +QLAQ S+V SG IE+ Sbjct: 52 ALSQATSANLGKNDFLKLLTTQLQNQDPSNPMKGKDFAAQLAQFSSVEQLTNISGQIEEQ 111 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 + G+++ I++S A++LIG V G T L TG EG T FGV+L++ A Sbjct: 112 GKSDGALAQSINDS---MATDLIGRTVKTSGNT-LQWTG--EGEAT----FGVDLERPAS 161 Query: 134 KVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 + T TI D G VRT + ++ TWDGT G+ P+G+Y+V +SA+ G Sbjct: 162 EATVTIRDAGGNAVRTKTLENVSQSTE-VTWDGTADGGAQVPDGTYSVEVSATGG 215 >UniRef50_C7LRK4 Flagellar hook capping protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRK4_DESBD Length = 226 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 13/173 (7%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G T + + + G +A FL LLV QL+NQDP NP+++ E +QLAQ S++ + + Sbjct: 14 GADTAAKNDVLGKDA------FLKLLVTQLQNQDPLNPLDDKEFIAQLAQFSSLEQMTNI 67 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 + + +S + L A N IG V G + ++ G TP L AA Sbjct: 68 SEGIKGLSDKTAQQDMLSAVNYIGKEVTASGDGI-----TKSG--NYVTPVYFTLGGAAA 120 Query: 134 KVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +V A + D+N +VRT + AG +FTWDG +G++A +G YNV SA Sbjct: 121 QVYANVYDENNNIVRTEKFTSMQAGEFAFTWDGLDYNGNSANSGQYNVYFSAE 173 >UniRef50_B7IDJ4 Basal-body rod modification protein FlgD n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDJ4_THEAB Length = 222 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 14/151 (9%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL- 90 + +FL LLV QLKNQDP P+++ E +Q+ Q+ST +E++ S+ +++S SL Sbjct: 28 KEAFLELLVTQLKNQDPLEPLKDREFIAQMTQLST---LEQITNMSESVQKFVESSASLY 84 Query: 91 --QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 QAS+++G ++ + G+ T+T F +E + V I D+NG +VR Sbjct: 85 RAQASSMVGKYAVVKSNVLELSNGT-----TSTQVFKLE---SPSHVILKIYDENGKLVR 136 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 D+G L+ G+ +F WDG DG P+G Y Sbjct: 137 QEDLGNLSEGMQTFLWDGRSDDGVMLPDGKY 167 >UniRef50_C0GT27 Flagellar hook capping protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT27_9DELT Length = 241 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 7/153 (4%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 FL LL+ QL+NQDP +PM++ E +QLAQ S++ + ++ + S++ + L A Sbjct: 35 DFLKLLITQLENQDPLDPMDDKEFVAQLAQFSSLEQLTNISEGMESMNENQARQEMLGAV 94 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 IG + G + S++G+ + + L+ A + I D+NG +VRT++ Sbjct: 95 GFIGKEIRADGDGI-----SKDGSGASKIFYN--LEDTAQNLYFNIYDENGNMVRTVEKS 147 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +G + F WDG DG+ AP+G+Y+V+ISA Sbjct: 148 ARQSGDYEFEWDGLNFDGAEAPDGNYSVSISAE 180 >UniRef50_Q1N303 Flagellar hook capping protein n=1 Tax=Bermanella marisrubri RepID=Q1N303_9GAMM Length = 262 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 22/143 (15%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 ++ FL LLV Q+ NQ+P P EN+E +QLAQ S+V G+E LNTT+ S+S + +SQ+LQ Sbjct: 32 RNEFLKLLVTQMNNQNPLKPQENSEFVAQLAQFSSVEGLENLNTTVDSMSDGLRSSQALQ 91 Query: 92 ASNLIGHGVMIPGTT--------VLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 AS+L+G V++P V+AG A T + LQ I +K Sbjct: 92 ASSLVGQSVIVPNQEYGFLQNGDVVAGV-----AEVPATTMNLNLQ---------IKNKA 137 Query: 144 GAVVRTIDIGELTAGVHSFTWDG 166 G + TID+G G S WDG Sbjct: 138 GQTLETIDLGFHEKGPASLRWDG 160 >UniRef50_Q3IDW5 Flagellar biosynthesis; initiation of hook assembly n=2 Tax=Alteromonadales RepID=Q3IDW5_PSEHT Length = 225 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 9/159 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q F +LL QL QDP+ P +N+++ +Q+ + GI LN+ +++ + ++ +LQ Sbjct: 33 QEDFFSLLTQQLSFQDPSKPADNDQMIAQMTSFTMAEGISNLNSNFEALAASMTSNSALQ 92 Query: 92 ASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 AS L+G ++ T+ L G G+V P + + I D++G +VRTI Sbjct: 93 ASTLVGKQALLESDTLDLNEAGDARGSVVAEKP--------VESLKLRIEDESGQLVRTI 144 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 D+G AG F WDG G P G Y + S G Sbjct: 145 DLGSQPAGAVRFAWDGKNEAGERLPPGEYKIKAEGSTNG 183 >UniRef50_C6HWM8 Flagellar hook capping protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM8_9BACT Length = 278 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 9/190 (4%) Query: 19 SSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 S S+L L ++ +++ QL+ QDP +PM+N + SQLAQ S + + +N + Sbjct: 22 SPSALPPPQKKKLGMEDYMNIMIRQLQYQDPFHPMDNRKFASQLAQFSQLDQLVHMNKKM 81 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ Q + +LQ +G V + G + G E V L + A T Sbjct: 82 EGMANQGRETDALQMVGFLGREVFLKGNRFIKGEHQEATLV-------FHLDRPAHNATV 134 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV-AQP 196 + +VR+ +G + AG WDG GS AP G Y + A + + V A P Sbjct: 135 YVYGAKHQLVRSFKVGPMDAGDQHVAWDGLSNKGSKAPAGGYEFEVVARDAKNRPVPASP 194 Query: 197 LQFALVQGVI 206 L+ +V GV+ Sbjct: 195 LRTGVVTGVV 204 >UniRef50_B9CZX6 Flagellar hook assembly protein n=2 Tax=Campylobacter RepID=B9CZX6_WOLRE Length = 234 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 7/161 (4%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 T NA + +F+ LL+ +L+ QDPT+PM+ ++ +Q +Q++ + E N + ++ Q Sbjct: 30 TNPNAQLDKDAFMKLLLTELQYQDPTSPMDTEKMLTQTSQLAALEMQENTNKMMQKLADQ 89 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 + NS ++ A +++G I + ++ EEG F L+ AA I D N Sbjct: 90 LKNSTNMYAVSVLGKMAKIGDSGII----KEEGKGVNFVGF---LESAAKGGKINIRDNN 142 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 G +VRT++ GE AG ++F WDG + G+ A G+Y+V IS Sbjct: 143 GRLVRTLEFGEAKAGANTFEWDGKDSSGNEAKAGTYSVEIS 183 >UniRef50_A6F9Q1 LfgD n=1 Tax=Moritella sp. PE36 RepID=A6F9Q1_9GAMM Length = 218 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 21/171 (12%) Query: 20 SSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 +S +T ++A L++ FL ++VAQ+KNQDP +P++ E SQLAQ S V G+E L S Sbjct: 15 TSEVTANSALGLKNEFLQMMVAQIKNQDPLDPLDGTEYVSQLAQFSMVEGVEGLRAGQSS 74 Query: 80 ISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139 + + Q LQ++ LIG V++P T + A G + V + L AAD+VT T+ Sbjct: 75 QAEMLYTQQVLQSTALIGTTVLVPSTGIAAKQGEKPSGV-------IRLDGAADEVTLTV 127 Query: 140 TDKNGAVVRT------------IDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 D NG V+ T ++ EL G S+ +D + G NG+ Sbjct: 128 KDLNGKVINTQTWKYPESGDIAFEVPELDEG--SYVFDVEVKMGERVLNGA 176 >UniRef50_B8J086 Flagellar hook capping protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J086_DESDA Length = 284 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 22/232 (9%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T + NT +S S+L + SF+ LLV Q K QDP NPME+ E +Q+AQ S+ Sbjct: 11 TNNEFNTALSKQKGSNLD-------KDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQFSS 63 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + + LNT++ ++ +N Q + A++ IG V + G T+ T E +T T F Sbjct: 64 LEQLMNLNTSMEGLTNATNNQQMINATSYIGKQVTVSGNTIGKVT-DETTKESTITRFRY 122 Query: 127 ELQQAADKV---TATITDKNGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSY--N 180 AD T T+ D + VV ++ G + F W+G TDG+ A +G Y N Sbjct: 123 ---APADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFLWNGKATDGTVAGDGVYTVN 179 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYG--TTTLDEVRQI 230 + + SNG L Q + A V GV+ N G + LG G L VRQ+ Sbjct: 180 LVLRDSNGDAVLSDQVVD-AKVTGVV--NDGGVVYLGLEGGQLMPLANVRQV 228 >UniRef50_A4WT49 Flagellar hook capping protein n=5 Tax=Rhodobacter sphaeroides RepID=A4WT49_RHOS5 Length = 225 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 75/136 (55%), Gaps = 10/136 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL LL QL+NQDP PMEN E +Q+AQ STVSGIE+LN TL I + + ++ Sbjct: 31 QEDFLKLLTTQLQNQDPFQPMENGEFLAQMAQFSTVSGIEQLNGTLSGIGEGLGSFRTAT 90 Query: 92 ASNLIGHGVMIPGTTVLAG-TGSEEGAVTTTTPFGVELQQAADKVTATITDK-NGAVVRT 149 A++LIG V++PGT A G GA T T P A+ V T + G ++ + Sbjct: 91 AASLIGRSVLVPGTLARADEAGGVHGAATLTDP--------AEAVVVTYSHSVTGQLLHS 142 Query: 150 IDIGELTAGVHSFTWD 165 +G AG +F WD Sbjct: 143 QTLGPQKAGQVNFGWD 158 >UniRef50_B5EEN7 Flagellar hook capping protein n=5 Tax=Geobacter RepID=B5EEN7_GEOBB Length = 221 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 99/195 (50%), Gaps = 12/195 (6%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 TG N D FL L V QL+NQDP NP + + SQLAQ++ V N+ L ++ Q Sbjct: 22 TGMNKDD----FLKLFVTQLQNQDPLNPQDGTQFISQLAQLTQVEQAYNTNSNLQNMLNQ 77 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 NS +L A LIG V G + +GS + +L AAD+VT ++TD++ Sbjct: 78 GSNSATLAAVTLIGKQVEAQGNQLELKSGSP-------STIQYKLDSAADQVTVSVTDQS 130 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALV 202 G VVRT+ G AG S TWDGT G+ G+Y+ ++SA G+ + A L V Sbjct: 131 GKVVRTLSGGSKGAGAGSVTWDGTDDKGTQLAAGTYSFSVSAKTASGSNVTAAGLVMGKV 190 Query: 203 QGVIRGNSGNTLDLG 217 GV + L +G Sbjct: 191 DGVDMSGASPMLSIG 205 >UniRef50_A8FXW6 Flagellar hook capping protein n=21 Tax=Shewanella RepID=A8FXW6_SHESH Length = 282 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 11/182 (6%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 TT +P + SS+ N+ +L Q F +LL QL QDP P++N+++ SQ+A Sbjct: 46 TTGNPFIDSIRLPEESSIPEPNSQELTQEDFFSLLSQQLSMQDPFKPVDNDQMISQMASF 105 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTT--VLAGTGSEEGAVTTTT 122 STV GI+ LN + +++ + +SQ+LQAS L+G V+IP T + A S G ++T Sbjct: 106 STVDGIKNLNDEIVNLNSVMTSSQALQASGLVGQKVLIPSDTGYISAEDPSINGIISTP- 164 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +A D +T + D G +V++ I G +WDG +G +G+Y++ Sbjct: 165 -------EAIDTITVRVEDDKGQLVKSFTIDGSAGGNIDVSWDGLGANGEPVASGNYSIK 217 Query: 183 IS 184 S Sbjct: 218 AS 219 >UniRef50_Q4JMN7 Predicted flagellar hook capping protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMN7_9BACT Length = 231 Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 16/204 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 QS FL L+ QL+NQDP PMEN E +Q+AQ STV+GI ++ T L +I+ Q+ + Sbjct: 37 QSDFLKLMTTQLQNQDPFAPMENAEFIAQMAQFSTVTGITEMGTELKAIAEQLGEFRIAT 96 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A+NL+G VM+PG A E + +EL A+ T ++ G V+ ++ Sbjct: 97 AANLLGSSVMVPGNYARADDNGEIHGM-------IELPSASGITNLTFSNAAGDVLHQME 149 Query: 152 IGELTAGVHSFTW---DGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG 208 +G +G+ F W ++ DG A + A G P FA + G Sbjct: 150 LGPQPSGLVGFAWTDIPQSVLDGDEA----IRIEAYADMGAGMESLTPSIFAEILAASTG 205 Query: 209 N--SGNTLDLGTYGTTTLDEVRQI 230 + +G LD+ YG E+++ Sbjct: 206 DQTTGVMLDVRDYGEVRAAEIKKF 229 >UniRef50_A6W1A4 Flagellar hook capping protein n=2 Tax=Marinomonas RepID=A6W1A4_MARMS Length = 234 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 13/195 (6%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q+ FL L + QLK QDPT P + N++ +Q++Q S++ + ++ L +++ + ++Q+L Sbjct: 43 QNVFLKLYIEQLKGQDPTAPQDTNDMVAQMSQFSSLERLTSISDQLENMATSLTSNQALS 102 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS L+G +++ G+ V G E + T P E QAA T I D + +VRT Sbjct: 103 ASTLVGKSILMDGSKVKVGDNVEAVQLKATIP---ENSQAA---TLKIYDADNRLVRT-- 154 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA-LVQGV-IRGN 209 EL+ G + WD +G+ P G Y A S++N ++ A Q +QGV I G Sbjct: 155 -AELSTG--EYKWDKLDDEGNVLPPGEYRFAASSTNEQGEISAISTQVPTRIQGVTINGE 211 Query: 210 SGNTLDLGTYGTTTL 224 +G L++ +G L Sbjct: 212 NGTVLNVENHGKIKL 226 >UniRef50_A8FPA7 Flagellar hook capping protein n=8 Tax=Shewanella RepID=A8FPA7_SHESH Length = 221 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 21/211 (9%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 G++AA +++ F+TL++AQ++NQDPTNP+++ E +QLAQ S V +E++ + + Sbjct: 23 GNDAASIKNEFMTLMIAQIQNQDPTNPIDSTEYVTQLAQFSQVESLEQMRLNQSTQMVMM 82 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 +N +Q++ LIG M+P + V T + G V T A ++++ I D++G Sbjct: 83 ENLGIVQSAQLIGKDAMVPASEVTLDTETVHGKVYTGN--------AVEELSIDIMDESG 134 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA--------QP 196 VV T+ +G G F+ D + P G Y++ A++G L A + Sbjct: 135 EVVSTLKLGPQEVGDIEFSID---PEALGLPPGKYSIEAQATSGEETLTADTFIQAPIEK 191 Query: 197 LQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + F G++ G LGT + EV Sbjct: 192 IHFVSASGMMMAELG--YGLGTVSVLDISEV 220 >UniRef50_Q39R05 Flagellar hook capping protein n=2 Tax=Geobacter RepID=Q39R05_GEOMG Length = 218 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 12/183 (6%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 TG N D FL L V QL++QDP NP +++E QLAQ++ V N+ L I Sbjct: 20 TGMNKDD----FLKLFVTQLQHQDPLNPADSSEFIGQLAQLTQVEQAYNTNSNLTKIIDL 75 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 + + SL + + IG V G + GS+ G L A +V I+D + Sbjct: 76 FNGATSLSSVSYIGKSVTANGDQINLTAGSKPA-------LGYRLPADAQQVAINISDIS 128 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALV 202 G VVRT+++G AG + WDG +GST P G Y+ +++ N G + PL V Sbjct: 129 GTVVRTLNLGNTRAGDGTILWDGRNGNGSTLPAGQYSFSVTGYNAKGEKFQGNPLLVGTV 188 Query: 203 QGV 205 +G+ Sbjct: 189 EGI 191 >UniRef50_A6LMJ0 Flagellar hook capping protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMJ0_THEM4 Length = 221 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 14/151 (9%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL- 90 + +FL LLV QLKNQDP P+++ E +Q+ Q+ST +E++ S+ +++S SL Sbjct: 27 KEAFLELLVTQLKNQDPLEPLKDREFIAQMTQLST---LEQITNMSESVQKFVESSASLY 83 Query: 91 --QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 Q S+++G ++ + G+ +T F +E V I D+NG +V+ Sbjct: 84 RAQVSSMVGKYAVVKSNILELKNGN-----ASTQVFKLE---EPSHVILKIYDENGKLVK 135 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 D+G L AG+ +F WDG DG P+G+Y Sbjct: 136 EEDLGNLNAGMQTFLWDGRNKDGVKLPDGNY 166 >UniRef50_B8FK44 Flagellar hook capping protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK44_DESAA Length = 230 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 12/158 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL LL+AQLKNQDP NPME + T+QLAQ S++ L I ++ S+Q Sbjct: 29 QEDFLQLLIAQLKNQDPLNPMEGTDFTAQLAQFSSLE-------QLFGIGDSLEEMLSIQ 81 Query: 92 ASNLIGHGVMIPGTTVLAGTGS--EEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 ++N G + G ++A S G ++++ F +E A V+ +I D G V+T Sbjct: 82 SNNGTGDVGYLLGKVIVAEDDSLTVNGGLSSSANFTIEEDAA---VSISIFDSYGIEVKT 138 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 I+ G L AG +S WDG G + +GSY+ +SA + Sbjct: 139 INAGSLEAGTYSVGWDGRDDSGVSVEDGSYSYEVSAKD 176 >UniRef50_C6C0W1 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0W1_DESAD Length = 242 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 13/159 (8%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNS---Q 88 Q FL LL+ Q++NQDP NPME+ E +Q+AQ S++ + ++N+ + ++ IDN+ Q Sbjct: 31 QDDFLKLLLTQMQNQDPANPMEDKEYMAQMAQFSSLEQLTQVNSNIKTM---IDNNAQDQ 87 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 + A IG V G ++ S + + +G L + I D N +VR Sbjct: 88 MVSAVGFIGKEVKAEGYSI-----SRDNGKISKVFYG--LGEPVANAFINIYDNNKNLVR 140 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 T+ +G G F WDG G P+G Y +A++A + Sbjct: 141 TVQLGSKAEGTFEFEWDGKNWAGKDVPDGVYTIAMAAED 179 >UniRef50_A3V266 Flagellar scaffolding protein FlgD n=3 Tax=Rhodobacterales RepID=A3V266_9RHOB Length = 233 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q+ FL L+ AQL+NQDP PM+N + +Q+AQ S+V+GI K++ T+ I+ Q+ + Sbjct: 36 QTDFLKLMTAQLQNQDPFAPMDNGDFIAQMAQFSSVAGISKMSETMSGIADQMGQFRVAS 95 Query: 92 ASNLIGHGVMIPGTTVLAGTGSE-EGAVTTTTPFGVELQQAA-DKVTATITDKNGAVVRT 149 + N +GH VMIPG A E GA +EL++A+ D + G + T Sbjct: 96 SVNYLGHSVMIPGNLARADDNGEIHGA--------IELERASVDTRIEFLDAMTGESLHT 147 Query: 150 IDIGELTAGVHSFTW 164 +D+G +G+ F W Sbjct: 148 MDMGGQASGLSGFAW 162 >UniRef50_C8WBV8 Flagellar hook capping protein n=4 Tax=Zymomonas mobilis RepID=C8WBV8_ZYMMN Length = 230 Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 8/139 (5%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FLTLL QLK QDP +P++N ++ +Q+AQ S+V+GI +LNTT+ SI + NS+ SN Sbjct: 42 FLTLLTTQLKYQDPDSPVDNTQMAAQMAQFSSVAGINQLNTTVSSIQSDVSNSRLGNVSN 101 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 IG ++ + G+ G V+L AA V ++ D G VV + D G Sbjct: 102 WIGKAGLVSSNIATSIDGTFAGQ--------VKLDSAASDVKISLADSAGKVVYSKDYGS 153 Query: 155 LTAGVHSFTWDGTLTDGST 173 +AG SF++ G + G+T Sbjct: 154 QSAGDVSFSFSGNDSSGNT 172 >UniRef50_C4TUA9 Basal-body rod modification protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TUA9_YERKR Length = 219 Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 9/141 (6%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N +L + F+TLLVAQ++NQDP NPM+ E SQ+AQ+S V E + L S + Q++ Sbjct: 26 NGDELNNQFMTLLVAQIQNQDPLNPMDGTEFVSQMAQLSQVQSTENMAKMLKSNTVQMER 85 Query: 87 SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAV 146 QS+ +NL+G VM+ V T + G +ELQ AA + +TD G Sbjct: 86 MQSIATANLVGQQVMVESDDVELDTQIQNGR--------LELQHAASPLVIHLTDDLGQE 137 Query: 147 VRTIDIGELTAGVHSFTWDGT 167 R I++GE +AG F D T Sbjct: 138 HR-INLGEQSAGSIDFAIDPT 157 >UniRef50_A3UFN5 Flagellar hook assembly protein FlgD n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFN5_9RHOB Length = 242 Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 77/160 (48%), Gaps = 9/160 (5%) Query: 29 ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ 88 AD +FLTLL QLKNQDP +P+E+ + QL Q S+V N +L ++ + Sbjct: 25 ADNFDTFLTLLTEQLKNQDPLDPLESEQFVQQLVQFSSVEQQIASNESLEALLALQQSDA 84 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 L+A + IG + L G +G L Q AD V I D+ G VR Sbjct: 85 QLKALDFIGKEATVNTRYNLLQDGE------AAWEYG--LSQEADSVEILIFDEKGTQVR 136 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 +D GE GVH+ TWDG G+T P G Y + I A + Sbjct: 137 RLD-GETGEGVHAVTWDGKDQAGNTLPEGVYEIEIIAKDA 175 >UniRef50_Q1K368 Flagellar hook capping protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K368_DESAC Length = 220 Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 10/165 (6%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 T S+ A ++ FL LLVAQL+NQDP P N E +QLA S++ N L S+ Sbjct: 19 TASSKALGEADFLELLVAQLENQDPLEPQSNTEFIAQLATFSSLEQQTMTNNKLDSVISA 78 Query: 84 IDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 + Q L +++G V+ L G E G+ L + A VT I D+ Sbjct: 79 TADMQQLAGIDMLGKTVVAQSDNFYLNGDQVE---------IGMYLPEDATSVTVNILDE 129 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 + +VV TID +L+AG + WDGT DG+ P G Y++++ A N Sbjct: 130 DESVVATIDSSDLSAGDNFLDWDGTDMDGNPLPEGEYSLSVEAYN 174 >UniRef50_C8QYQ2 Flagellar hook capping protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYQ2_9DELT Length = 251 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 8/170 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 GS++ D Q F+TL + QL++QDP PME+ E+ SQLAQ S++ +++ + + Sbjct: 25 GSSSLDRQD-FMTLFITQLQHQDPMKPMESYEMASQLAQFSSMEATMQMSDNMEKLLSYQ 83 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 + +LQ +LIG + G + G +G V T+ L+Q A I D G Sbjct: 84 MSQNNLQLLSLIGKTIETDGNEI----GVTDGQVARTS---YVLEQDAPFSVVYIHDAAG 136 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 +VRTID G +AG ++ WDG G+ P+G Y + A G VA Sbjct: 137 QLVRTIDNGYQSAGQNTLAWDGKDNSGNLVPDGMYTYKVDALAGDGSKVA 186 >UniRef50_Q2BQT9 Basal-body rod modification protein FlgD n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQT9_9GAMM Length = 235 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 15/203 (7%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ-SLQAS 93 F+ L++AQL+NQDPT+P + N+ Q+A +S V I L T+ S S + SQ +LQAS Sbjct: 39 FMRLMIAQLQNQDPTSPADTNDFMQQIATMSQVESINNLTQTVQSTSQSMLASQAALQAS 98 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG---VELQQAADKVTATITDKNGAVVRTI 150 +++G V I G T G T P+ L +A +V + + +G++V T+ Sbjct: 99 SMVGQSVYIAGDTAEVG--------TVVNPYAKGSFNLDSSASEVRIKVYNSSGSLVDTM 150 Query: 151 DIGELTAGVHSFTWDGTL-TDGS-TAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG 208 +G ++ G H F W DG+ P G Y + + G V V G Sbjct: 151 QLGAVSQGEHEFAWQMKFDEDGNPEQPAGDYTFVVERMDDGEYNAIDTNMAYRVNSVTLG 210 Query: 209 NSGNTLDLG-TYGTTTLDEVRQI 230 +G + + T GT + EV+QI Sbjct: 211 ENGIGMQVNTTAGTYDVSEVKQI 233 >UniRef50_A8F889 Flagellar hook capping protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F889_THELT Length = 219 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 9/176 (5%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 + ST +SS T SN D + +FL LL+ QLKNQDP PM+N + +QL Q ST+ I Sbjct: 6 DYSYSTYTSSERTPSNTLD-KDAFLLLLITQLKNQDPLEPMDNKDFIAQLTQFSTLEQIT 64 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQA 131 + ++ + + Q+++LIG + + G E V EL +A Sbjct: 65 NMTNSIQEFLTLQEGALQAQSASLIGKYATVQANQITVSDGVSESIV-------FELDEA 117 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 A V I D +G ++R L AG H++ WD + G +G+Y +S N Sbjct: 118 A-PVIVRIYDSDGNLIREATSSTLDAGAHAYVWDARDSSGLQVEDGTYTYVVSKLN 172 >UniRef50_Q2LKA7 FlgDL n=1 Tax=Aeromonas hydrophila RepID=Q2LKA7_AERHY Length = 231 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 14/159 (8%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 L++ FL ++VAQ++NQDPTNP++ + +QLAQ S V G+E L +D Q L Sbjct: 41 LRNEFLQMMVAQIQNQDPTNPLDGAQYVTQLAQFSMVEGVESLKVLQQKSINMMDTQQVL 100 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 Q++ LI VM+P T+ T S E + +EL AAD+V + D++G +V T Sbjct: 101 QSTALIDKEVMVPSKTL---TQSAEKTIRGQ----IELAGAADQVELKVYDEHGTLVATK 153 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 + G+ AG G + P G Y+ + AS G Sbjct: 154 NWGDSKAG-------GLDYELPPLPAGEYSFEVKASLDG 185 >UniRef50_A5V5R8 Flagellar hook capping protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5R8_SPHWW Length = 226 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 10/182 (5%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G +S+++ SN + Q+ FL LL Q++ QDP NP++N ++ +Q+AQ S +GI ++ Sbjct: 15 GAKNSSTTTTKKSNESLSQNDFLKLLTTQMQTQDPFNPVDNTQMVAQMAQFSQTTGIAEM 74 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLA-GTGSEEGAVTTTTPFGVELQQAA 132 N +L S+ + S+ A+N IG ++P A GS G VT L AA Sbjct: 75 NQSLKSMVQSLQQSRVADAANWIGKAALLPSKAASALADGSFAGNVT--------LPDAA 126 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL 192 +V ++ D +G VV T + AG F WDG DG+ G + SA + Q Sbjct: 127 SRVDISLVDGSGTVVYTGSATNVPAGDVPFYWDGKDQDGNPVA-GPLTIVASAKDSQAQA 185 Query: 193 VA 194 +A Sbjct: 186 MA 187 >UniRef50_Q1NGN4 Flagellar scaffolding protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGN4_9SPHN Length = 219 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 15/222 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ T TD V +++ TGS D Q+SFL LL AQ++ QDP P++N E+ SQ Sbjct: 1 MTSVSTVTDSAGLSVYNPNATVGTGSATMD-QASFLKLLTAQMQYQDPFEPVDNAEMVSQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI-PGTTVLAGTGSEEGAVT 119 +A I+ SGI ++N L SI ++ ++ A++ IG +++ V +G G V+ Sbjct: 60 MATITNSSGIAEMNANLASIKQELTGTRLGDAASWIGKSMLVQSNVAVPDASGYYAGQVS 119 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 A + T + D +G VV+TID+G AG +F WDG G T + Sbjct: 120 --------FADATNGATVDLVDGSGNVVKTIDLGSQQAGDVTFYWDGKDDMGETVSTDAL 171 Query: 180 NVAISASNGGT-QLVAQPLQFALVQGVIRGNSGNTL-DLGTY 219 V + NG T VA A VQ G+S + LG+Y Sbjct: 172 QVKV---NGATPSKVATWATIAAVQSPADGSSSKLITALGSY 210 >UniRef50_Q15R84 Flagellar hook capping protein n=2 Tax=Alteromonadales RepID=Q15R84_PSEA6 Length = 228 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 8/151 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q F +LL QL NQDP+ P++N+++ +Q+ + GI +LN + + + ++Q+LQ Sbjct: 32 QEDFFSLLTEQLANQDPSKPVDNDQMVAQMTSFTMADGISQLNEKFETFATSMTSNQALQ 91 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA-TITDKNGAVVRTI 150 AS+LIG V++ G +A SE V+ GV + + T TI +++G++V+T+ Sbjct: 92 ASSLIGQQVLLQGD--VAHMASEGQGVS-----GVVINDSTTLNTKITIENESGSIVKTL 144 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 DIG G F WDG G+ P G+Y V Sbjct: 145 DIGTQPVGNIQFNWDGKDAAGNFMPPGNYVV 175 >UniRef50_A0Z355 Flagellar hook capping protein n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z355_9GAMM Length = 239 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL L++AQL+NQDPT PM+ SQLAQ + VSGI++LN + ++ + Q+LQAS Sbjct: 41 FLQLMIAQLENQDPTKPMDQMAFMSQLAQFTQVSGIQELNESFSGLTETLTGQQALQASQ 100 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPF-----GVELQQAADKVTATITDKNGAVVRT 149 ++G V T+ G S G TT P V++ A + + D NG +V + Sbjct: 101 MVGRSV---STSSNVGNLSVLGTNTTGDPVMRMSASVDMGNNATGGSFFVQDMNGQLVFS 157 Query: 150 IDIGELTAGVHSF--TWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIR 207 G L AG + WDG +G+T P G Y ++ + G A V V Sbjct: 158 ---GTLPAGSGTLPVVWDGVDAEGNTLPPGQYRISAEVARNGANQAASVFAHEQVVSVAI 214 Query: 208 GNSGN--TLDLGTYGTTTLDEVRQII 231 G +GN TL+L + ++EV++ Sbjct: 215 G-AGNTVTLNLANGQSLGINEVKEFF 239 >UniRef50_D1U365 Flagellar hook capping protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U365_9DELT Length = 225 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 9/156 (5%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL LL+ QL+ QDPT P++N E+ +Q+ Q S + + + L ++ + S + A + Sbjct: 34 FLNLLITQLQYQDPTEPVDNTEMVNQMTQFSQLESLTSIEDKLDELTSSLSASSTTSAIS 93 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 +G V G + L+ +G + + + L AA+ VT I + +G +V T + Sbjct: 94 YLGKEVEASGYS-LSKSGDD------ISDLYLTLDDAAESVTVNIYNSSGTIVDTETLSA 146 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISA--SNG 188 L AG +SFTWDG +DGS +G+Y VAISA SNG Sbjct: 147 LEAGSYSFTWDGLDSDGSEVADGTYYVAISAEDSNG 182 >UniRef50_C4UZG9 Basal-body rod modification protein n=2 Tax=Enterobacteriaceae RepID=C4UZG9_YERRO Length = 218 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 85/158 (53%), Gaps = 12/158 (7%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 L + F+TLLVAQ++NQDP NP + E SQ+AQ+S V E + L S + Q++ Q++ Sbjct: 29 LNNQFMTLLVAQIQNQDPLNPTDGTEFVSQMAQLSQVQSTENMAKLLKSNTVQMEKMQAM 88 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 +NL+G VM+ T+ + G +T LQQAA V +TD G I Sbjct: 89 ATANLVGQNVMVESGTIELDNKKQSGRLT--------LQQAASDVVVYLTDTAGR-EHPI 139 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 ++GE +AG +FT D + P G Y ++ +S+G Sbjct: 140 NLGEQSAGSVNFTLDP--SQHKLKP-GKYQLSAVSSSG 174 >UniRef50_Q2RWZ4 Flagellar hook capping protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWZ4_RHORT Length = 245 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 87/159 (54%), Gaps = 19/159 (11%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT-----TLGSISGQIDNS 87 ++FLTLL +QLKNQDP +PM++ E T+QL Q + V +++NT L ++SG NS Sbjct: 32 NTFLTLLTSQLKNQDPLSPMDSTEFTNQLVQFAQVE--QQINTNDNMEKLLAVSG---NS 86 Query: 88 QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 Q+ A +G V T V G AV F L AAD VT + D+ +V Sbjct: 87 QAAMAVGYLGKYVEAESTVVALQDGQ---AV-----FTYGLTAAADNVTIALYDEKDNLV 138 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 R G+LT G+H TW+G + G +G+Y +A++A+ Sbjct: 139 RAFQ-GDLTQGLHKITWNGKDSYGEKLDDGTYRIAVTAT 176 >UniRef50_A7HV67 Flagellar hook capping protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HV67_PARL1 Length = 226 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 18/181 (9%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 S+T+S++L G+ +FL LL QL++QDPTNPM +++ T QL Q+S V + N Sbjct: 19 SSTASAALAGNF-----DTFLKLLTTQLQHQDPTNPMSSDQFTQQLVQMSGVEQSIQTNR 73 Query: 76 TLGSI--SGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 L ++ + I N+ Q+ +L+G V GT L GS + + + A Sbjct: 74 YLETLITANAIQNAS--QSVSLLGKEVTGSGTGTLLADGSAK--------WSFAVASDAS 123 Query: 134 KVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV 193 T + + +GA V T + + TAG H FTWDG + GS P+G+Y + ++A+N Q V Sbjct: 124 DTTLQVINADGATVYTEKM-DATAGTHQFTWDGKDSKGSDLPDGTYFLRVTANNASGQPV 182 Query: 194 A 194 A Sbjct: 183 A 183 >UniRef50_D1B5D1 Flagellar hook capping protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B5D1_SULD5 Length = 229 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 18/202 (8%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL LL+ +L++QDPT+PM+++++ +Q AQ+S++ + L +S Q+ + + A Sbjct: 34 FLQLLLTELEHQDPTDPMDSDKILTQTAQLSSLEASQNTTAALEELSDQLSANTNFSAIG 93 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVT---TTTPFGVELQQAADKVTATITDKNGAVVRTID 151 +IG +A GS A+T T+ F + T TITD NG V+TID Sbjct: 94 VIGQ---------MASLGS--SAITLENKTSNFEIYFPSEIKDGTLTITDTNGKTVKTID 142 Query: 152 IGELTA---GVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG 208 IG+ A GV +F WDG DG+ +G+Y+ +S ++ L V+ V Sbjct: 143 IGDSVAGKSGVIAFNWDGVDNDGTQLADGTYSATVSYTDASGALKTTQAGTYPVESVRYV 202 Query: 209 NSGNTLDLGTYGTTTLDEVRQI 230 + + LG+Y +DEV + Sbjct: 203 DGAAYVKLGSY-YYAIDEVLEF 223 >UniRef50_A5IJB4 Flagellar hook capping protein n=6 Tax=Thermotogaceae RepID=A5IJB4_THEP1 Length = 224 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 8/152 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL LL+ +L+ QDP PME ++ SQL+Q++++ I L + + + Q Sbjct: 29 KEAFLRLLLQELEMQDPLEPMETKDMISQLSQLASLEQITNLTSAVKDFVEAQTSVNPAQ 88 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 ++LIG V++ TV G + + F V+ V I D+NG VVRT D Sbjct: 89 LASLIGKYVVVKNNTVNLVDGQSDSII-----FNVD---EDAHVVVQILDENGKVVRTED 140 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 +G + AGVH++ WDG G + +GSY I Sbjct: 141 LGTVQAGVHAWQWDGRDDSGISVEDGSYTYHI 172 >UniRef50_B2K1Q4 Flagellar hook capping protein n=23 Tax=Yersinia RepID=B2K1Q4_YERPB Length = 218 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 15/170 (8%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 L + F+TLLVAQ+KNQDP NP + E SQ+AQ+S V E + L S + Q+ Q++ Sbjct: 29 LNNQFMTLLVAQIKNQDPLNPADGTEFVSQMAQLSQVQATENMAKLLKSNTVQMAKMQTM 88 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 +NL+G VM+ G + G G +T L+Q A + ITD G + I Sbjct: 89 ATANLVGQQVMVEGHEITLGKDRVAGRLT--------LKQPAPTLLLHITDILGQ-EKVI 139 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA 200 D+G+ AG +FT D + G Y ++ + S G +L+ PL+ A Sbjct: 140 DLGKQPAGPVNFTLDPAVAKLQP---GQYQLS-AVSGSGEELI--PLEVA 183 >UniRef50_A4U4K0 Basal-body rod modification protein flgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K0_9PROT Length = 220 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 8/197 (4%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 F+ LL AQL+NQDP +P + E T+QL Q S + N L + ID Sbjct: 29 FIQLLCAQLENQDPLDPTDATEFTNQLVQYSNLEQQMATNDKLDEVLSSIDLMSMSSGVG 88 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 +GH V G T+ + ++G V + L AA VT T+TD++G VV G+ Sbjct: 89 YMGHTVEAEGDTI---SVQDDGTVDAAWVY--SLDSAATDVTLTVTDEDGNVVWE-GSGD 142 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIRGNSGNT 213 G + FTWDG +DG+T G+Y ++++A++ G + + V GV + Sbjct: 143 AAKGRNDFTWDGKDSDGNTVDGGAYTLSVAATDADGAAIGSTTYVSGKVTGVTSSDGTTI 202 Query: 214 LDLGTYGTTTLDEVRQI 230 L+LG G TLD + ++ Sbjct: 203 LELGEMG-ITLDAITRL 218 >UniRef50_Q1NVF9 Flagellar hook capping protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NVF9_9DELT Length = 223 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 GS++ D ++ F+ L + QL+ QDP PM++ E+ SQLAQ S + K++ + + Sbjct: 24 GSDSLD-RADFMKLFITQLQYQDPMEPMDSYEMASQLAQFSNMEATMKMSDNMEKLLDYQ 82 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 + +LQ LIG + G + G E T+ LQ+AA I G Sbjct: 83 KSQNNLQLLGLIGKNIETAGNEISMVDG--EADRTSYV-----LQEAAAFNVVYIYGPGG 135 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 +VRT+D+G AG + WDG +G AP+G Y + A Sbjct: 136 QLVRTLDMGYQGAGKQTLAWDGLDNNGEVAPDGPYTYKVDA 176 >UniRef50_Q2LSZ6 Flagellar hook capping protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ6_SYNAS Length = 220 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 14/179 (7%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 TN G + ++ S T +N + FL +L+AQL+NQ+P NP++ + +QLAQ S++ + Sbjct: 5 TNIGKAASAGSEGTSTNKLTGKDEFLKMLIAQLQNQNPLNPLDGTDFAAQLAQFSSLEQL 64 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMI--PGTTVLAGTGSEEGAVTTTTPFGVEL 128 +N+TL S+S + A+NLIG V G +L TGS + L Sbjct: 65 TNMNSTLESLSALQTTQNGIMAANLIGRQVSANQEGGNILTVTGS-------SANLSYSL 117 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 + A KVT I ++ G +V+T++ +AG ++ TWD + G+Y +SA + Sbjct: 118 AKDAKKVTVNIYNEEGKLVKTLEGRNQSAGHNTLTWDCGVD-----AQGAYTFDVSAED 171 >UniRef50_Q30UM0 Flagellar hook capping protein n=2 Tax=Campylobacterales RepID=Q30UM0_SULDN Length = 221 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 19/193 (9%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + F+ LL+ +L++QDPT PM++ ++ SQ +Q++T+ E N L ++ + SQ Sbjct: 30 KDDFMKLLLVELQHQDPTEPMDSEKILSQTSQLATLEASENTNKALSELAASMSASQQFS 89 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 + IG + + G T T F + A T I D NG ++T+D Sbjct: 90 TVSAIGKTADLGSNAITLDKG-------TNTKFEMYFPDAISNGTVQILDVNGNTIKTLD 142 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-----GTQLVAQPLQFALVQGVI 206 +G GV+ FTWDGT +G +G Y S +N T++ A P++ + Sbjct: 143 VGTNPKGVYGFTWDGTNANGGAVDSGIYYATASYTNPDGAALKTRVGAYPIE------SV 196 Query: 207 RGNSGNT-LDLGT 218 R + G T L LG+ Sbjct: 197 RFDKGETFLKLGS 209 >UniRef50_A3U109 Related to basal-body rod modification protein (FlgD) n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U109_9RHOB Length = 221 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 22/177 (12%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 +ST +S+ L+ AD QS FL LL AQL NQDP PM+++ SQLAQ+S V + N Sbjct: 16 LSTVASNKLS----ADYQS-FLKLLTAQLTNQDPLEPMDSSTFVSQLAQLSQVEQSIQTN 70 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTT--VLAGTGSEEGAVTTTTPFGVELQQAA 132 T L SISGQ+ N+ LIG V +PG ++ G G+ E + TT A Sbjct: 71 THLESISGQLANAGLTSDLGLIGREVSVPGDLFDLIGGKGTFEYVLATT----------A 120 Query: 133 DKVTATITDKNGAVVRTIDIGELTAG---VHSFTWDGTLTDGSTAPNGSYNVAISAS 186 ++V A I D G V I+ L G +HS W+G ++G+ +G Y I A+ Sbjct: 121 NEVRAIIRDSAGNSVAQIE--GLKTGAETLHSVDWNGIGSEGTPVADGIYTAEIIAT 175 >UniRef50_B4UFG0 Flagellar hook capping protein n=3 Tax=Anaeromyxobacter RepID=B4UFG0_ANASK Length = 225 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 13/176 (7%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 G + +SS G +A FL LL QL++QDP +PM++ +QLAQ S+V + Sbjct: 15 QAGQAPAPASSALGKDA------FLKLLTTQLQHQDPLSPMDSQAFVAQLAQFSSVEQLG 68 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQA 131 L L +++ +S L + L+G V+ V G F V L Sbjct: 69 ALGDKLDTLAMAQASSNQLGTAALVGKEVLFRADRVRLDPGGPAR-------FEVTLPAE 121 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 A + A + D +G VVRT+ +G AG +WDG G P G Y + +SA+ Sbjct: 122 AGEAVAILADASGRVVRTLQLGARDAGTFQVSWDGRDASGEPLPAGDYLLTVSATR 177 >UniRef50_A4XNR6 Flagellar hook capping protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNR6_PSEMY Length = 225 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 12/175 (6%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G+ ++ S+A L+++FLTL+VAQ++NQDPT P+++ E +Q A +S V +E + Sbjct: 15 GIDEAVKQAVNVSDATQLENNFLTLMVAQIQNQDPTKPVDSTEFLNQFAAMSQVKSLENM 74 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 + S +DN Q+L A+ L+G V + + G +G V L+ AA Sbjct: 75 ASLSKSNLVLLDNLQTLTAAGLVGQEVKVATEKLELGADKVKGEVN--------LEHAAG 126 Query: 134 KVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 K+T +TD NG V + I +G G F D AP GSY V + + +G Sbjct: 127 KLTLVVTDSNG-VKKEIALGSQAPGRVPFELDPKAL--GLAP-GSYKVEVQSDSG 177 >UniRef50_A4C6H0 Flagellar basal body rod modification protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6H0_9GAMM Length = 240 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 8/167 (4%) Query: 16 STTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ST T A +L QS F TL+ QL QDP NP +N + +Q+ +S G+ + Sbjct: 19 STKDEKIQTAEEANELSQSDFFTLMTKQLSMQDPMNPTDNEAMMAQMTNMSIAEGVSNMA 78 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 T + + ++Q+LQAS+L+G V+I T + T E +T P L+ A Sbjct: 79 TKFDQFAVSMTSNQALQASSLVGRNVLI-DTHYVQNTPGE--PITGRIP----LEGPASD 131 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 + I D+ G VV I + G F WDG + G+ P G Y + Sbjct: 132 IKVRIEDERGIVVGEIPLPASNGGNIEFAWDGKDSQGNVVPEGMYKI 178 >UniRef50_UPI0001826559 flagellar basal body rod modification protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826559 Length = 234 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 10/166 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+ +T ++T +T S + ++AA + + F+ LLVAQ++NQDP NP + E Q Sbjct: 1 MSVNGVSTQASDTATTTDSGIAPNDNSAAGMTNLFMKLLVAQIQNQDPLNPTDGTEYVGQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLA-GTGSEEGAVT 119 LAQ++ V +E + + +I +DN Q+L NL+G VM+ T+ G+ S +G +T Sbjct: 61 LAQLTQVQSMENMTVGMQNIGVLMDNLQTLSTGNLVGQKVMVQTDTLQTDGSTSVDGRLT 120 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWD 165 L+ AA+ VT + D++G + +++G+ AG +FT D Sbjct: 121 --------LEHAANTVTVILKDESGKETK-VELGKQEAGEVNFTVD 157 >UniRef50_Q31FK9 Flagellar hook capping protein FlgD n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FK9_THICR Length = 227 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 11/161 (6%) Query: 26 SNAADLQ---SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 SNA D Q + FL LL QL+NQDP PM+ + L Q+S + K+N ++ +++ Sbjct: 25 SNAPDQQLGQADFLRLLTTQLQNQDPNKPMDPTNFVTDLTQMSQLEATTKMNQSMLAMTT 84 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 + N Q +Q+++LIG V G T+ G+E TP + L Q VT ++D Sbjct: 85 GLQNMQVMQSASLIGKNVQAIGDTMSHEAGTE-------TPIRLSLDQPLKDVTVVVSDG 137 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 +G V I + +L AG WDG G+ A +G Y + + Sbjct: 138 SGPVSE-IFVDDLNAGEKMVNWDGKDKLGNVAGSGEYTLTV 177 >UniRef50_Q1MQV6 Flagellar hook capping protein n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQV6_LAWIP Length = 279 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 10/181 (5%) Query: 10 PTN--TGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 PTN +GVS+ + + ++L + FL LLV Q K QDP NPME+ E +QLAQ S Sbjct: 2 PTNGASGVSSATGIFSQQAGKSELGKEDFLKLLVTQFKYQDPLNPMEDKEFIAQLAQFSA 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + N + S+ Q + A++ IG V G V S +G + + + Sbjct: 62 LEQQMSTNEKMESLLNLQTQQQMISAASFIGKEVAARGYGV-----SVKGDTISNIQYAI 116 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + K I D + ++ T+ + G+H F WDG L +GS +G Y V I+ Sbjct: 117 NEEMV--KGYVNIFDASNQLITTVQLDSKAPGIHDFDWDGLLPNGSKVSDGVYTVNIAGQ 174 Query: 187 N 187 N Sbjct: 175 N 175 >UniRef50_A1VDY6 Flagellar hook capping protein n=5 Tax=Desulfovibrio RepID=A1VDY6_DESVV Length = 265 Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 8/168 (4%) Query: 21 SSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 S++ S ADL + +FL LLV QLK+QDP NPM++ E +QLAQ +++ + +NT + S Sbjct: 18 SAVKKSGNADLGKDAFLQLLVTQLKHQDPLNPMDDKEFVAQLAQFTSLEQLMGINTGVTS 77 Query: 80 ISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139 ++ Q + A + IG V+ G + + ++G + + + + I Sbjct: 78 MNEAFKQQQMMNAVSYIGKDVLASGDQI---SKIKDG----VSKLYFSIDEPITQGVINI 130 Query: 140 TDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 + + +VR+ I AG + + WDG G+ +G Y VA++A N Sbjct: 131 FNASNELVRSEFISAKQAGDYEYVWDGKDYQGNAMADGLYKVAMAAEN 178 >UniRef50_A7ZB54 Flagellar hook assembly protein n=1 Tax=Campylobacter concisus 13826 RepID=A7ZB54_CAMC1 Length = 235 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 16/156 (10%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +F+ LL+ +L++QDPT+PM+ ++ +Q +Q+++V E N + + Q+ ++ + Sbjct: 41 KDAFMKLLLTELQHQDPTSPMDTEKMLTQTSQLASVEMQENTNKAMKELVNQLKSNANAY 100 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTT-----TPFGVELQQAADKVTATITDKNGAV 146 A + +G + TGS AVT T F + + + + NG V Sbjct: 101 AISALGK---------MVSTGS--NAVTLTDEKKDAKFALYFKTDLANGKIEVKNANGQV 149 Query: 147 VRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 VRT D+ E AGVH+ WDG G+ PNGSY ++ Sbjct: 150 VRTTDLNETNAGVHNLAWDGKDASGNQVPNGSYTIS 185 >UniRef50_A4BEL4 Flagellar hook capping protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEL4_9GAMM Length = 248 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 33/223 (14%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 ++ FL L++A+L NQDP P ++ + ++LAQ STV GI+ ++ ++ +SQ+LQ Sbjct: 31 KTEFLELMIAKLNNQDPLKPQDDAQFIAELAQFSTVEGIQNMSAGFEELATSYKSSQALQ 90 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS+L+G V I G T + G + + E+ +D + I D G ++ + Sbjct: 91 ASSLVGGAVTIDGNT---SSKLRHGELVYGS---AEIPSGSDNLFLQIEDSTGQIIEDVP 144 Query: 152 IGELTAGVHSFTWDG------------------TLTDGSTAPN--GSYNVAISASNGGTQ 191 +G G +F WDG T +G+ P+ G Y I S G Sbjct: 145 LGYQPNGELTFKWDGANLEVNGELADIDYSKFETDENGNIIPHPAGDYTFRIQGSVVGQ- 203 Query: 192 LVAQPLQFALVQGV----IRGNSGNTLDLGTYGTTTLDEVRQI 230 AQ + ++ V I GN+ L+L + T T+ +V+QI Sbjct: 204 --AQVMDVSMSDRVDSVTILGNNDIQLNLASGETATMADVKQI 244 >UniRef50_B4WBD2 Flagellar hook capping protein, putative n=2 Tax=Brevundimonas RepID=B4WBD2_9CAUL Length = 238 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 26/182 (14%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK-------LNTTLGSISGQIDN 86 +FLTLL Q+KNQDP +P+++NE T+QL Q+ +G+E+ L + + + SG ++N Sbjct: 27 TFLTLLTTQMKNQDPLSPLDSNEFTAQLTQM---AGVEQQLLTNDLLTSLVAAQSGNLNN 83 Query: 87 SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAV 146 A+ IG V T + T ++G + EL A T + D G V Sbjct: 84 -----AAAYIGKEV----TAAWSATTLKDGKAD----WNYELASDAAAATLKVLDSKGKV 130 Query: 147 VRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVI 206 V + + G+HSFTWDG + G G Y + +SA + VA AL QG + Sbjct: 131 VWEGPAPDKSQGLHSFTWDGKTSGGEVLTEGVYTLKVSAMDSKNANVASQ---ALTQGRV 187 Query: 207 RG 208 +G Sbjct: 188 KG 189 >UniRef50_Q0C5K2 Putative basal-body rod modification protein FlgD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5K2_HYPNA Length = 216 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 11/141 (7%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 SF+ LL AQ++NQDP +PM++ + QLA S++ + NT L SI+ I + L AS Sbjct: 29 SFIKLLTAQVRNQDPMSPMDSTQFVEQLATFSSLEQLVNSNTALSSIASMIGDLNGLMAS 88 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 +G V ++ + TGSE F E + A K T T+ D G V T Sbjct: 89 QWLGEDVTF-ASSFMPYTGSE-------ATFSYEAPEGATKSTLTVKDSEGNAVWT---E 137 Query: 154 ELTAGVHSFTWDGTLTDGSTA 174 L A F+WDG LT+G TA Sbjct: 138 TLDADETVFSWDGQLTNGGTA 158 >UniRef50_B6AMC0 Probable flagellar hook capping protein FlgD n=2 Tax=Leptospirillum sp. Group II RepID=B6AMC0_9BACT Length = 276 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 12/175 (6%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL L+++QL+ QDP +P+ N +QLAQ S + + LN +G+I+ ++ + Sbjct: 38 FLHLMISQLQYQDPLHPLNNTRFAAQLAQFSQLDQLTHLNRGVGTIAHDGADANKMMMVG 97 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA--TITDKNGAVVRTIDI 152 +G V + G G V+ T +QA + I D +VRTI + Sbjct: 98 FLGQRVTMKGNAFRL---DPSGNVSLT------YRQAGASQSGHLRIFDGQNHLVRTIAL 148 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ-PLQFALVQGVI 206 + G H+ WDG G AP GSY+ I A +G + VA P++ V G++ Sbjct: 149 KPMGPGSHTLEWDGVTDQGVRAPKGSYSFEIDAMDGRHRPVAATPVETGTVTGIL 203 >UniRef50_Q1YV96 Flagellar basal body rod modification protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV96_9GAMM Length = 228 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 8/155 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q +FLTL AQL+NQ+P +PM+N SQLA+ S++ GI+ + +L ++ + Q + Sbjct: 32 QDAFLTLFTAQLQNQNPLDPMDNEAFVSQLAEFSSLEGIKGMQGSLDNMVNGMRQDQMVA 91 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD-KNGAVVRTI 150 +NL+G V + G G G T ++L A V ++ D +G ++ Sbjct: 92 GANLVGKKVQVAGGNFTGGNGE-------ITKGSIDLDYGAQSVILSVYDPASGDLIYRD 144 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 G G W+G G P GSY ++ SA Sbjct: 145 TQGARLPGRAEMNWNGRDRQGEIVPEGSYLMSASA 179 >UniRef50_A3T090 Flagellar hook assembly protein FlgD n=2 Tax=Sulfitobacter RepID=A3T090_9RHOB Length = 223 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 10/175 (5%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 + FLTLL AQ++NQDP P+++ + +QLAQ+S V + NT L +++ QI +L Sbjct: 31 TKFLTLLTAQIQNQDPLEPVDSTQFVAQLAQLSQVEQAVQTNTQLETLTSQISGLLNLGG 90 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID- 151 ++L+G V + V+ E+G T+ G A +V+A I D G VRTI+ Sbjct: 91 TDLLGRDVTVQSDVVML----EDGTSLTSYEVGA----GAAEVSAKIYDPLGRNVRTING 142 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGV 205 + ++ + WDG G+ G Y V ++A + G + QP + A V+ V Sbjct: 143 LSTVSGTANPLGWDGKDDYGNAQLAGKYTVVLTAKDAAGNNIAIQPSRSARVEDV 197 >UniRef50_A4U361 Basal-body rod modification protein FlgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U361_9PROT Length = 226 Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 11/176 (6%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 TG S +++S G+ A+ +FLT+L QLKNQDP +PM++ E T+QL Q S V Sbjct: 9 TGASNNAANS--GTRLAENFDTFLTMLTVQLKNQDPLSPMDSTEFTNQLVQFSAVEQQIA 66 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 N L ++ + QA IGH + + + V G F L + A Sbjct: 67 SNKNLENLISVTQTNTKAQAIAYIGHTIEVAASAVPLQDGK--------AAFSYTLPEDA 118 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 +T I D +G ++ + + AG WDG T G +G+Y + I+A+N Sbjct: 119 RSITVAIKDTSGKLIANL-TAKTAAGRTEMAWDGRDTTGKVVEDGAYKIEINATNA 173 >UniRef50_A7HN98 Flagellar hook capping protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN98_FERNB Length = 218 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 19/207 (9%) Query: 15 VSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 +S S+S + DL + +FL LL+ QLK+QDP PM++ + +Q++Q+S++ + + Sbjct: 8 MSNLFSTSTDRTTKKDLDKEAFLKLLITQLKSQDPLEPMKDRDFIAQMSQLSSLEQVMNM 67 Query: 74 NTTLGSISGQIDNSQSL---QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 + ++ S +D + L QA ++IG ++ + G E V L Sbjct: 68 SKSVQSF---VDTAAQLYRTQAVSMIGKTAVVKTNVINVENGVPESKV-------FNLDS 117 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI--SASNG 188 A+ + I D NG +++ IG++ AG+ F WDG +G+ +G Y I + +G Sbjct: 118 PAN-IVIKIFDSNGKLIKEEKIGQVEAGMQLFAWDGKDENGTKVKDGRYTFKILKTTPDG 176 Query: 189 GTQLVAQPLQFALVQGV-IRGNSGNTL 214 G + + ++ +V GV GN N + Sbjct: 177 GYEEIPS-VESGIVSGVQFDGNKINVI 202 >UniRef50_B6IQD6 Basal-body rod modification protein FlgD, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQD6_RHOCS Length = 219 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 T P+ G T++ + A D QS FL LL AQL NQDP P++ + +QLAQ S Sbjct: 3 TVAPPSAAGSQQTTADVASVRLAQDTQS-FLKLLTAQLANQDPMAPIDATQFVTQLAQFS 61 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPF 124 +V + NT L + G++ +S +G V I + L G G++ + T P Sbjct: 62 SVEQAVQSNTRLAEVLGELRSSSERLDLAYVGRTVEIESDALPLIGGGAK---ASYTVPE 118 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 E K I D+ G +VRT++ G G H TWDG G +G Y + ++ Sbjct: 119 DTE------KTEIRILDQKGTIVRTLE-GSSIPGSHLLTWDGLDDSGVKLADGIYQIDVA 171 Query: 185 ASN 187 N Sbjct: 172 PRN 174 >UniRef50_C6XM56 Flagellar hook capping protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM56_HIRBI Length = 222 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 15 VSTTSSSSLTGSNAADLQSS-------FLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 +S + SS + SN+A QS+ FLTLL AQL+NQDP P ++ E T+QL Q S V Sbjct: 5 ISFVNQSSGSTSNSAQSQSALASDFDTFLTLLTAQLQNQDPLEPTDSTEFTNQLVQFSGV 64 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 + N L + +++ S+ +G V I AG E+ + Sbjct: 65 EQQIQTNDALEQLIASNNSATGAAMSSYLGQSVEINSQG--AGYSGED------LSWRYA 116 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA 174 L A + T I DKNG V+ + + E +AG H F WDGTL+DG+ A Sbjct: 117 LASDATEATFNIQDKNGKVLYS-EPAEKSAGSHEFVWDGTLSDGTIA 162 >UniRef50_B0UIW9 Flagellar hook capping protein n=9 Tax=Alphaproteobacteria RepID=B0UIW9_METS4 Length = 233 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 9/160 (5%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FLTLL QLKNQ+P +P++ N+ T QL Q ++V K N L ++ + + A+ Sbjct: 33 FLTLLTTQLKNQNPLDPLDTNQFTQQLVQFASVEQQLKTNDRLDTMVAASKAATASSAAG 92 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 L+G V G T GS + + +AA + TITD+ G VV T Sbjct: 93 LVGKTVTADGATAALAGGSAS--------WTLTAARAATRAVLTITDQKGNVVAT-RTQS 143 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 L G SFTWDG + G TAP+G+Y + + A++ Q V+ Sbjct: 144 LANGGQSFTWDGRSSTGLTAPDGTYTLKVQATDATGQTVS 183 >UniRef50_B4RG78 Flagellar hook assembly protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG78_PHEZH Length = 230 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 13/178 (7%) Query: 14 GVS-TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 GVS T +S++ + A+ +FL LL QLKNQDP +P+++N+ T Q+ Q++ V Sbjct: 5 GVSGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVEQQLL 64 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 N L S+ N S A +LIG V TV A + A T P + A Sbjct: 65 TNDLLKSLVSNTSNGVS-TAVSLIGKEVR--AATVDAKLKDGQAAWIYTLP------RDA 115 Query: 133 DKVTATITDKNGAVVRTIDIGE--LTAGVHSFTWDGTLTDGSTAPNGS-YNVAISASN 187 + V + D NG VRT+ E AG H TWDG +G P+G Y++ +SA + Sbjct: 116 NDVKLEVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLPDGGVYSLKVSAKD 173 >UniRef50_A0LDL3 Flagellar hook capping protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL3_MAGSM Length = 224 Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 110/232 (47%), Gaps = 27/232 (11%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 V DP + ++TS+ +A +LQS FL +L AQL++QDP PMEN E TSQLA Sbjct: 10 VPVYDPNASKYTSTST------DAKELQSDFLRMLTAQLEHQDPLEPMENTEFTSQLATF 63 Query: 65 STVS----GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +S + L + +SG D Q QA IG V++ G T+ G E G Sbjct: 64 EGLSQQQNSTQLLQQLVELMSGGTD--QVGQAVAYIGREVLVEGNTLTIG---ESGKAN- 117 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTW-DGTLTDGSTAPNGSY 179 EL AA+ V + + G ++++ + + G+ S + D + A N + Sbjct: 118 ---INFELSDAAN-VEVVMYNAAGEELKSVSLSYDSGGIKSLDLNNAQYGDATAAGNYKF 173 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTT-LDEVRQI 230 V + G++ AQ L LV GV+ +G LD+ GT L +VR+I Sbjct: 174 RVVV---RDGSETTAQTLATGLVAGVVNDTNGVKLDVN--GTQVDLADVRRI 220 >UniRef50_A5ESH7 Putative flagellar basal-body rod modification protein FlgD n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESH7_BRASB Length = 235 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 25/220 (11%) Query: 19 SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLG 78 S+S+ TG AD SFLTLL QL +Q+P +P+ N+ T QL Q + V K NT L Sbjct: 28 SASARTG--IADNFQSFLTLLTTQLNHQNPLDPLNVNQFTQQLVQFAQVEQQLKGNTLLE 85 Query: 79 SISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 + ++QS QA L+G ++ G+ LA GS V ++ TA Sbjct: 86 RLVEAQKSTQSTQALMLVGRTAVVDGSEASLAKGGS-----------AVWNLRSPKSATA 134 Query: 138 TITDKN--GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 T++ +N G +V + L +G SF WDG ++G+ P G Y + + A + G + +A Sbjct: 135 TVSVRNVTGQLVYSATRA-LNSGDTSFAWDGQASNGAMCPPGQYKLVVDAKDIGGKPIAV 193 Query: 196 PLQFALVQGVIRG----NSGNTLDLGTYGTTTLDEVRQII 231 A QGV+ S L +G LD VR++I Sbjct: 194 A---AEAQGVVESVDLTKSPIMLSIGGR-NYPLDSVRRVI 229 >UniRef50_C1SLD5 Flagellar hook capping protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD5_9BACT Length = 232 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 12/158 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 QS FL L + QL+NQDPT+PM+++ + Q A + V + + +L I+G N + Q Sbjct: 30 QSDFLNLFITQLQNQDPTDPMDDSAMMEQTATFTQVELLTSMEKSLSEIAGGASNLNTQQ 89 Query: 92 ----ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 AS IG V G G AV+ E ++ K T TI D G V Sbjct: 90 LMMSASGYIGKLVEFDGNNTYLSDGV--AAVS------FEAEEVPFKTTVTIKDSEGNFV 141 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 R+ +++F W+GT DG+ G Y ++ A Sbjct: 142 RSFSPSVSDTDMNTFYWNGTDADGNAVDEGKYTFSVVA 179 >UniRef50_C5SMJ0 Flagellar hook capping protein n=2 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMJ0_9CAUL Length = 224 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 16/188 (8%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL LL AQ+KNQDP +PM++ + T+QL Q ++V K N L S+ G L A Sbjct: 31 TFLGLLTAQIKNQDPLSPMDSTQWTNQLVQYTSVEQQLKANEYLKSLVG-------LGAG 83 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 N+ MI G T +A ++ T + EL A +V + D +G V Sbjct: 84 NMASSVNMI-GKTAIADIDTQTFKDKPLT-WHYELASTASQVGVEVLDADGKTVWKGTSD 141 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-------ALVQGVI 206 +L G ++FTWDG + G+T G Y + ++A++ +A + L+ G I Sbjct: 142 QLNKGDNTFTWDGKDSTGNTVKEGDYTLKVTATSASGSAIANAISVQQRVDATELIDGEI 201 Query: 207 RGNSGNTL 214 GN+L Sbjct: 202 VLRMGNSL 209 >UniRef50_A1T0J4 Flagellar basal-body rod modification protein FlgD n=12 Tax=Gammaproteobacteria RepID=A1T0J4_PSYIN Length = 230 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 15/165 (9%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 +++ L++ F+TL+VAQ++NQDP NP + E SQLAQ S V E + + + S +DN Sbjct: 31 DSSSLKNEFITLMVAQIQNQDPLNPGDGTEYVSQLAQFSQVESAENMVSLMQRNSVMMDN 90 Query: 87 SQSLQASNLIGHGVMIPGTTV-LAGTGSEE--GAVTTTTPFGVELQQAADKVTATITDKN 143 Q L ++L+G VMI + G ++ G V T+P + +V I D+ Sbjct: 91 LQVLATASLVGQEVMIRSDKFSVDGEPAQNLSGQVVLTSP--------SSQVNLLINDQF 142 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 G + + + +G AG F D + G+++V++ SNG Sbjct: 143 GQIKKVV-LGPQAAGQVDFKLD---VEALNLAKGAHSVSVELSNG 183 >UniRef50_Q0EZL7 Flagellar hook capping protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZL7_9PROT Length = 221 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL LLVAQ++NQ+P P + +++SQLAQ + V N L + +D S + +A++ Sbjct: 30 FLKLLVAQMQNQNPLKPQDPTQMSSQLAQFNMVEQQTSSNALLQQL---VDASSTQKATS 86 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 G + TV + G T + F V A + T++D G VRTI++ Sbjct: 87 SNGASYLGKNVTVQQDQINYTG---TASNFSVVTDHPAAQAQITVSDSTGTPVRTINLKN 143 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIRGNSGNT 213 L AG + +WDG G+ A G Y + + A++ G + + Q V V +G T Sbjct: 144 LPAGGSNLSWDGITDSGAAAAQGKYTINVQATDAQGAAVTSHIEQSGTVDAVRFSANGTT 203 Query: 214 LDLG 217 + +G Sbjct: 204 MIIG 207 >UniRef50_Q2C8I4 Flagellar basal body rod modification protein n=3 Tax=Vibrionaceae RepID=Q2C8I4_9GAMM Length = 226 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 +S V + TN V+ +++ ++A L++ F+ L+VAQ++NQDP NP++ E Q Sbjct: 9 LSTDVPAIESTNMSVAGNPNNA---NDANSLKNEFINLMVAQIQNQDPLNPLDGTEYVGQ 65 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVT 119 LAQ S V E + + + +DN Q L + L+G V + G+ + LA ++G Sbjct: 66 LAQFSQVESTENMAKLMQNSMVLLDNMQVLSTAGLVGQTVYVEGSEIELADDKQQKGR-- 123 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 +EL A++ V+ +TD+ G + + +G G FT D D + G Y Sbjct: 124 ------IELNHASNTVSIVLTDQLGN-QKIMPLGPKNKGDVEFTIDPNALDLAK---GKY 173 Query: 180 NVAIS 184 ++I Sbjct: 174 QISIE 178 >UniRef50_B3QDF7 Flagellar hook capping protein n=9 Tax=Bradyrhizobiaceae RepID=B3QDF7_RHOPT Length = 222 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL+LL+++L+NQDP N + +QL + S +++N+++ S++ + +L + N Sbjct: 33 FLSLLISELQNQDPLNATSTTDFINQLTSYANFSQQQEINSSMTSLANSFSSLVTLNSVN 92 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 IGH V T GS FG L AA V+ +I D +G V + G Sbjct: 93 YIGHTVEAKTDTATLTGGSA--------TFGYTLSAAASDVSISIKDSSGNTVWS-GTGS 143 Query: 155 LTAGVHSFTWDGTLTDGST-APNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG 208 AG +S TWDG + G+ A G Y +++SA++ V +++ V G + G Sbjct: 144 GNAGSNSLTWDGKNSSGTQLADGGQYTISVSATDSAGNSV---YKYSTVSGTVTG 195 >UniRef50_C6BZU8 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZU8_DESAD Length = 226 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 15/200 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FLTLL QL+ QDPTNP +N + +Q+ + + N L +I Q+D SL Sbjct: 32 QVDFLTLLTTQLQYQDPTNPTDNTAMINQMTNYAMLDEDVAQNENLEAIINQLDALASLS 91 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 + LIG VM PG G+ S EG T ++LQ A +V I D G +V TI Sbjct: 92 TAGLIGEEVMAPG-----GSFSVEGGEATGVT--IDLQDDASEVGINIYDSEGELVDTIY 144 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIRGNS 210 L G T + + + +G Y + A++ G + A + + R +S Sbjct: 145 FDNLEEGEIEITGAQIMAEANLENDGEYTALVFATDSDGASVEAYIKSTGTISSIGRDDS 204 Query: 211 GNTLDLGTYGTTTLDEVRQI 230 N T TLD+ R++ Sbjct: 205 NNI-------TLTLDDGREV 217 >UniRef50_Q1GCA6 Flagellar basal-body rod modification protein FlgD n=8 Tax=Rhodobacterales RepID=Q1GCA6_SILST Length = 231 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 11/161 (6%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL L+ Q K QDP PM++++ T+QLAQ S+V N TL S+ + S Q + Sbjct: 36 FLRLMTTQAKYQDPLEPMDSSDYTAQLAQFSSVEQQVLTNETLTSMLTALSLSNMSQLTG 95 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 +G V G+ S P V ADKV I D A V +D Sbjct: 96 WVGREVRAQAAGYFDGSSS---VSIAPNPAAV-----ADKVEMIIYDDQEAEVGRVD--- 144 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 L + W+G DG+T P GSY+ I +S+ G ++++ Sbjct: 145 LPVSAEPYQWNGEDGDGNTLPEGSYSFVIESSSNGEVILSE 185 >UniRef50_A9DSD1 Flagellar hook capping protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSD1_9RHOB Length = 222 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 SFLTLL AQ+ NQDP NP+++ + SQLAQ++ V N +L IS + ++ Sbjct: 31 SFLTLLTAQISNQDPLNPVDSTQFVSQLAQLTQVEQSIATNASLEQISTMLSTVGAMSDL 90 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 LIG V++P + V T E P +L A+ VT I ++G +VR + G Sbjct: 91 QLIGRDVLVPSSQVRM-TEDE-------FPLSYQLNAGAEDVTIRIYSEDGTLVREMP-G 141 Query: 154 ELTA--GVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNS 210 TA V W+ + G P ++ V I+A++ G + PL A V V Sbjct: 142 PSTAEGKVIDVDWNRLDSVGLPVPPDTFRVEITATDVSGNDVGVTPLTRAEVTRVNFTGQ 201 Query: 211 GNTLDL 216 G L+L Sbjct: 202 GAELEL 207 >UniRef50_Q2WA16 Flagellar hook capping protein n=2 Tax=Magnetospirillum RepID=Q2WA16_MAGSA Length = 274 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 9/153 (5%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FLT+L QLK+QDP +PM++ + T+QL Q S+V N+ L + +Q+ Q Sbjct: 33 TFLTMLTTQLKHQDPLSPMDSTQFTNQLVQFSSVEQQINANSNLEKLIKLQQTAQTSQGI 92 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 + +G V + GT + + ++T T P + A V I D G V +I G Sbjct: 93 SYLGQTVEVSGTDLPLQDSA--ASLTYTLP------KEARDVKIVIKDSTGKQVNSI-AG 143 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 E +G HS +W+G + G+ +G Y+ + A+ Sbjct: 144 ETASGAHSLSWNGKDSSGTQLDDGRYSFQVVAT 176 >UniRef50_A7JZA8 Flagellar basal-body rod modification protein FlgD n=5 Tax=Vibrio RepID=A7JZA8_VIBSE Length = 227 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 15/184 (8%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 V+T N G++ ++A+ L++ F++L+VAQ++NQDP NP++ E QLAQ Sbjct: 15 VSTKAKENNGIAPNPKDM---NSASSLENEFISLMVAQIQNQDPLNPLDGTEYVGQLAQF 71 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V E ++ T+ +DN Q L + L+G V + G G + G Sbjct: 72 SQVQSTENMSRTMQQSMILLDNMQVLSTAGLVGQTVYVNSKEFELGEGVQNGK------- 124 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 +EL ++++VT + D+ G + + +G G F+ + + P G Y+VA+ Sbjct: 125 -IELAHSSNQVTLVVKDEFGQSTK-VPLGAHGKGDVDFSINP--EELGLKP-GKYSVAVE 179 Query: 185 ASNG 188 G Sbjct: 180 VQEG 183 >UniRef50_B6AV37 Possible FlgD protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AV37_9RHOB Length = 224 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T P +G T+ + T + +D ++ FL +L Q++NQDP NP+++ + QLA S+V Sbjct: 10 TPPLFSGQRDTNQAQKTAALGSDFET-FLKMLTVQMENQDPLNPVDSADYAVQLATFSSV 68 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 + N L S++ + S +++ +GH V G V AG EG + +E Sbjct: 69 EQQVRTNDLLSSLAATM-ASGGVES---LGHWV---GMDVRAGN---EGYFDGSD---IE 115 Query: 128 L----QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 L ++ AD+ + D+ G + +I A F+WDG +G AP+G+Y ++ Sbjct: 116 LIAPDRKDADQRILVVRDETGGITTQENIA---ASGTDFSWDGNFANGVEAPHGTYTFSV 172 Query: 184 SASNGGTQLVAQPLQ 198 + N GT L + +Q Sbjct: 173 ESFNNGTLLATESVQ 187 >UniRef50_B3EBG4 Flagellar hook capping protein n=2 Tax=Desulfuromonadales RepID=B3EBG4_GEOLS Length = 223 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 11/156 (7%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL L +AQ++ QDP P + N++ SQ++Q++ V T L ++ NS +L + Sbjct: 31 AFLKLFIAQIQYQDPLAPQDTNDMLSQISQLTQVEQSYNTATALNNLLTAQSNSLALSSV 90 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ--AADKVTATITDKNGAVVRTID 151 LIG ++ G ++ + +G T P + Q+ A T TI +++G VVRTID Sbjct: 91 GLIGKDIVALGDSL-----NFDG----TNPVTLSYQKTSATTGTTLTIKNESGQVVRTID 141 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 +G G ++ WDG G+ G+Y+ +IS ++ Sbjct: 142 LGAQEVGDATYQWDGKDAQGNVLAAGAYSFSISGTD 177 >UniRef50_B9L649 Flagellar hook capping protein n=2 Tax=Nautiliaceae RepID=B9L649_NAUPA Length = 223 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 6/151 (3%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +F+ L +A+L+ QDPT+PM+ +++ Q A +ST+ + + +L ++S + S + Q Sbjct: 27 KDAFMKLFLAELQMQDPTDPMDTDKMLEQTAYLSTMEMNDNMQKSLDNLSNVL--STTSQ 84 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 S L G M ++ +V FG ++ I DKNG VV+T Sbjct: 85 FSTLSAIGKMADTGYRYVNVTDDDNSVNFDLYFGDDIASG----NVIIKDKNGNVVKTFP 140 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + T GV +F WD +G P+ +Y V+ Sbjct: 141 LEAHTKGVLNFDWDLIGDNGERVPSDTYEVS 171 >UniRef50_Q0FVE9 Possible FlgD protein n=2 Tax=Rhodobacteraceae RepID=Q0FVE9_9RHOB Length = 224 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 15/200 (7%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQS---SFLTLLVAQLKNQDPTNPMENNELT 58 S AVT PT ST S+ NAA L S +FL +L Q++NQDP NP+++ + Sbjct: 3 SSAVTGAIPTGRAESTGSAGEEQTKNAAVLSSDFETFLKMLTTQMQNQDPLNPVDSTDYA 62 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 +QLA S+V N LG ++ + Q + IG V+ +GA Sbjct: 63 TQLATFSSVEQQVLTNDLLGDLAQAMTGGTLQQLGSWIGRDVLADAAVRF------DGAP 116 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 P E + AD + D G+VV+ + L W G G+ +G Sbjct: 117 LVMRP---EFEPGADAARLVVRDAAGSVVQRL---SLDPSQPVVAWQGVRDSGTPMASGI 170 Query: 179 YNVAISASNGGTQLVAQPLQ 198 Y+ + + +GGT + QP Q Sbjct: 171 YSFEVESLSGGTTVARQPAQ 190 >UniRef50_D0I441 Flagellar basal-body rod modification protein FlgD n=2 Tax=Vibrionaceae RepID=D0I441_VIBHO Length = 223 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 7/146 (4%) Query: 18 TSSSSLTGSNAADLQSS-FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 +S + G+N + S+ FLT++VAQ++NQ+P NP + + +QL +S V +E + Sbjct: 17 VASETQVGANGMNPSSNDFLTMMVAQVQNQNPLNPTDGTQYLTQLGMMSAVESLESVKVG 76 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 L +++ + N + LQA+NL+G V++ V G +E T V+ +A D Sbjct: 77 LNNLNIGMTNVEMLQATNLVGKKVLM---DVNNGLTLQE---NQTVDARVQFDEAVDNAK 130 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSF 162 + D+ G VV I +G AG+ F Sbjct: 131 VVVYDEKGKVVEEIKLGARPAGMVEF 156 >UniRef50_B5JZB8 Basal-body rod modification protein FlgD n=2 Tax=Rhodobacteraceae RepID=B5JZB8_9RHOB Length = 226 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL---NTTLGSISGQIDNSQSL 90 +FL +L Q++NQDP NP +++E QLA T SG+E+ N L ++ Q++ + Sbjct: 38 TFLKMLTVQMENQDPLNPTDSSEYAQQLA---TFSGVEQAVLTNDLLSALMVQMNTTGMA 94 Query: 91 QASNLIGH--GVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 Q ++ +G ++PG +G+ T P + ADKV ++D G V+ Sbjct: 95 QMADWVGKEARAIVPGHF--------DGSPITIAPNPAAI---ADKVELVVSDPQGNEVQ 143 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ-PLQFALVQGVIR 207 DI W GT +DG+ P+G Y+ + +S G ++A+ +A VQ V Sbjct: 144 RYDIPN---SADPIEWAGTQSDGTPLPSGLYHFQVVSSANGVPVLAETAATYARVQEVRS 200 Query: 208 GNSGNTLDL 216 N + L L Sbjct: 201 ENGQSVLVL 209 >UniRef50_A5FUQ9 Flagellar hook capping protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUQ9_ACICJ Length = 253 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 22/155 (14%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FLT+L QL+NQDPT+PM +++ TS+L Q S V N +L + QAS+ Sbjct: 66 FLTMLTTQLQNQDPTSPMSSSQFTSELVQFSQVEQQISTNQSLTQLLQLTQAGDLTQASS 125 Query: 95 LIGHGV-----MIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 ++G V +P + GTG+ T+ P + + NGA + Sbjct: 126 MLGSKVTATSSQLP---LQNGTGTLNFTAPTSGPVAIAV-------------YNGAGQQI 169 Query: 150 IDIG-ELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 +D TAG +S+TW+G G+T P+G+Y VA+ Sbjct: 170 LDTSMNATAGSNSWTWNGKDASGTTVPDGAYKVAV 204 >UniRef50_B6IT44 Basal-body rod modification protein FlgD, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IT44_RHOCS Length = 309 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 13/157 (8%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL LL AQLKNQDP P E +E T+QL Q S V N+ L +++G + Q+ A Sbjct: 36 TFLQLLTAQLKNQDPLQPQETSEFTNQLVQFSQVEQQISTNSKLDNLTGVVQQGQATVAL 95 Query: 94 NLIGHGVMIP--GTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 IG V + G +L G T + E++ A T I+DK+G +V T Sbjct: 96 QYIGKTVELEPSGIPLLP------GGTTVSYDIDGEVRSA----TLVISDKDGNIVNTQS 145 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 + ++ G ++ WDG G G Y +I S G Sbjct: 146 V-QVRPGRNTAFWDGNDATGKAMTPGFYTASIQFSGG 181 >UniRef50_B0SWE2 Flagellar hook capping protein n=3 Tax=Caulobacter RepID=B0SWE2_CAUSK Length = 232 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 21/195 (10%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +AVT T T T S +SL A + +FL LL QLKNQDP +P + +++TSQ+ Sbjct: 1 MAVTATSNTVTDKINNSRTSL-----ASNEQTFLKLLTTQLKNQDPLSPTDTSQMTSQIT 55 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGS---EEGAVT 119 Q++ V N L ++ G + I GV + G V A T + G T Sbjct: 56 QMTGVEQQLVTNELLTALVG-------MSTGGGISEGVNLMGKQVTAETAKSVLKNGEAT 108 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-GS 178 + ++A V + DK V+ T+ ++ G H+F WDG DG P+ G Sbjct: 109 ----WSYTQSRSATGVKIEVLDKYDKVITTVLPDDMAGGDHTFKWDGKSKDGVKQPDGGE 164 Query: 179 YNVAISASNG-GTQL 192 Y + ++A++ GT++ Sbjct: 165 YTIKVTATDAEGTKI 179 >UniRef50_A0RLY6 Flagellar hook assembly protein n=3 Tax=Campylobacter RepID=A0RLY6_CAMFF Length = 263 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL LL+ +L+ QDPT PM++ ++ Q +Q++T+ E N + ++ Q+ +S S+ Sbjct: 47 KDAFLKLLLVELQYQDPTEPMDSAKMLEQTSQLATLEMQENTNKVMKQLTTQMQSSLSMT 106 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A + +G + + T++ F + + I D + +V+ I Sbjct: 107 AMSALGKMANL-------SNAVSKDTTTSSVDFSLYFPNDVKSGSIQIYDSSENLVKNIK 159 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSY 179 EL +G++ F WDGT +G G Y Sbjct: 160 FDELKSGINKFNWDGTDNNGDITLPGEY 187 >UniRef50_Q2CGF8 Flagellar hook assembly protein FlgD n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGF8_9RHOB Length = 222 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 22/188 (11%) Query: 25 GSNAA---DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 GSNAA + Q+ FL +L AQ+ NQDP PM+++ +QLAQ+S V + N L + Sbjct: 19 GSNAAMDSNYQN-FLKMLTAQVTNQDPLAPMDSSTFVTQLAQLSQVEQTVQSNGHLRELL 77 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 + + S+ LIG V + GS + + L A IT Sbjct: 78 AGVQSFGSMAEVQLIGKPVTYASDRISLAGGSAD--------YLYSLDAEAASAKLVITG 129 Query: 142 KNGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQL------- 192 +G V+R I +T G H+ TWDG + G P+G++ I A + G Q+ Sbjct: 130 ADGQVLREIGGLAVTPGERHAVTWDGRDSQGLPVPDGTFTAEIRAVDADGEQIGYSGYAS 189 Query: 193 -VAQPLQF 199 VA+ L+F Sbjct: 190 SVARALEF 197 >UniRef50_B0K1S4 Flagellar hook capping protein n=9 Tax=Thermoanaerobacter RepID=B0K1S4_THEPX Length = 131 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 10/90 (11%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 TN V++ ++ ++ N+ + FL LLV QLKNQDP NPM++ E +QLAQ ST+ + Sbjct: 5 TNYNVTSIYNNRVSTLNSQLGKDDFLKLLVTQLKNQDPLNPMDDREFIAQLAQFSTLEQM 64 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 + +N+++ +I +A NLIG + Sbjct: 65 QNMNSSINAI----------RAINLIGKNI 84 >UniRef50_B6QZA4 Flagellar hook capping protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZA4_9RHOB Length = 218 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 18/153 (11%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQIST----VSGIEKLNTTLGSISGQIDNSQSL 90 F++LL Q++NQDP P++++E T+QL Q + V+ EKL+ L + Q + Sbjct: 29 FISLLTTQIQNQDPLEPLDSSEYTNQLVQYTMVEQQVATTEKLDEQLTQLKTQ----SAS 84 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 Q N IG V +T + + A K T TI + GA V Sbjct: 85 QFVNYIGKEVTAQSSTAQLKDDKASWNLDAVS---------AGKATVTIKNSEGAEVYQK 135 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 +I +L G ++F WDG T+G+ A +G+Y++ I Sbjct: 136 EI-DLVEGDNTFEWDGVATNGTKAEDGAYSIDI 167 >UniRef50_A5L6P4 Flagellar basal body rod modification protein D n=2 Tax=Vibrionales RepID=A5L6P4_9GAMM Length = 222 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 28 AADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNS 87 A+ L++ F+TL+VAQ++NQDP NP + E +QLAQ S V E L + S +DN Sbjct: 28 ASALKNEFITLMVAQIENQDPLNPTDGTEYVAQLAQFSQVESTENLVQLTQNNSTMLDNL 87 Query: 88 QSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAV 146 Q L + LI V + + AG G +ELQ ++ V + D G Sbjct: 88 QVLSTAALIDKTVTVKSERLSAAGVDQHTGY--------IELQAPSNTVMLELVDSLGN- 138 Query: 147 VRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 V+++++G +AG +T D + +G Y + I +G Sbjct: 139 VKSLNLGPNSAGRVDYTLDAQ----AMGLSGQYQMRIKLDSG 176 >UniRef50_B9L4C9 Flagellar hook capping protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L4C9_THERP Length = 146 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 40/50 (80%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 + +FL LLVAQLKNQDP NPM++ E +QLAQ++T+ +++LN T+ +++ Sbjct: 27 KQAFLMLLVAQLKNQDPMNPMQDREFIAQLAQLNTLEQLQQLNETVAAMA 76 >UniRef50_Q5WFR3 Flagellar basal-body rod modification protein FlgD n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFR3_BACSK Length = 144 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T DP+ +S++ + +NA Q +FL LL+ QL+NQDP+NP+E+ E +QLA Sbjct: 1 MTQVDPS-LWLSSSQNQQRQPNNALG-QDAFLKLLITQLQNQDPSNPIEDREFIAQLATF 58 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 S + + KLN+T+ + + + Q + S LIG V Sbjct: 59 SQLEQLTKLNSTMEYMYYEQKSQQLMALSELIGKSV 94 >UniRef50_D1C163 Flagellar hook capping protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C163_SPHTD Length = 150 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 4/93 (4%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T+ TN G SS++ + ++ Q FL LL AQL+NQDP PME+ E +QLAQ++++ Sbjct: 7 TNQTNPGTDAASSTTFSPADRLGKQE-FLMLLTAQLRNQDPLRPMEDTEFIAQLAQLNSL 65 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 ++++N TL ++ ++ S Q ++LIG V Sbjct: 66 EQMQQMNETLSTL---VEMSVLAQTASLIGRHV 95 >UniRef50_C5EXK1 Flagellar basal body rod modification protein n=3 Tax=Helicobacter RepID=C5EXK1_9HELI Length = 379 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 49/197 (24%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV-------SGIEKLNTTLGSISGQID 85 +F+ L + QLKNQDPT PME E+ +Q AQ++ V + +E++ TT+ S+ Q Sbjct: 120 EAFMRLFLEQLKNQDPTAPMETQEILTQTAQLTQVEAQTQMKNAMEQMTTTMQSM--QET 177 Query: 86 NSQSLQA-SNLIG-HGVMIPGTTVLAGTGSEEG--------------AVTTTTPFGVELQ 129 N ++++A LI M+ VLAG+ + A T T VE Sbjct: 178 NEKTIEAQQKLIKTQEKMLETMGVLAGSIQDSSIIGGYNTVGMIGNIAETPYTALKVEKN 237 Query: 130 QAAD--------------KVTATITDKNGAVVRTIDIGEL----------TAGVHSFTWD 165 +A D + TITDK+ V+R ID+ G F WD Sbjct: 238 EAIDFELYFDEPIDPTKGQPKITITDKDNNVIREIDLAAQDEEGNYIYLNKEGYVEFEWD 297 Query: 166 GTLTDGSTAPNGSYNVA 182 + G NG Y V Sbjct: 298 TRDSKGKFVANGDYTVK 314 >UniRef50_A3PFK9 Flagellar hook capping protein n=4 Tax=Rhodobacter sphaeroides RepID=A3PFK9_RHOS1 Length = 222 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 84/188 (44%), Gaps = 30/188 (15%) Query: 11 TNTGVSTTSSSSLTGSNAA---DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T+ G STT S ++ A D ++ FL +L QL+NQDP NPME+++ QLA T Sbjct: 8 TSAGSSTTRSRGDASADKAVTSDYET-FLRMLTTQLQNQDPMNPMESDDFAMQLA---TF 63 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF-GV 126 SG+E+ Q+ ++ L +G + + G + LAG E V F G Sbjct: 64 SGVEQ----------QVKTNEILTG---MGASIGVMGLSELAGWIGREAEVEAPAWFDGA 110 Query: 127 EL------QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 L + AD+ + + GAVV DI G W GT G P G+Y+ Sbjct: 111 PLTLSPKPSEDADRAVLVVRNAAGAVVAQEDI---PIGGGQMEWAGTDASGQPLPKGAYS 167 Query: 181 VAISASNG 188 + + G Sbjct: 168 FTVESYTG 175 >UniRef50_A0P3G8 Flagellar hook capping protein n=2 Tax=Labrenzia RepID=A0P3G8_9RHOB Length = 219 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL++L Q++NQDP +P+++ E T+QL Q S+V K N L I + ++QS+ + Sbjct: 30 FLSILTTQIQNQDPLDPLDSAEYTNQLVQYSSVEQAIKQNQNLEEIIASLTSNQSMGYVS 89 Query: 95 LIGHGVMIPG-TTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 IG+ V TT L+G+ + + L++ A I + G++V + +I Sbjct: 90 YIGNEVTADASTTTLSGSKAS---------WSYSLEEDATG-EFEIRNSAGSIVYSGEI- 138 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQ 191 EL AG +F W G G A +G Y ++ + ++ Sbjct: 139 ELAAGDGTFYWGGQTDSGQQAVDGLYTISFDMKDASSR 176 >UniRef50_B1K3C8 Flagellar hook capping protein n=2 Tax=Burkholderia cepacia complex RepID=B1K3C8_BURCC Length = 241 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 20/180 (11%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 TGV + ++ G+ D+ + F LLVAQ+KNQDP PME N+ +Q AQ+S V + Sbjct: 11 TGVGGSVATPTAGNGEGDVSAMFTRLLVAQVKNQDPLAPMEANQFVTQFAQMSQVEAMR- 69 Query: 73 LNTTLGSISGQIDNSQS----LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 TL ++S +Q + + +G V + V G +G+ +L Sbjct: 70 ---TLANLSAATARTQESMLVVTLGSQVGSQVRVRSEKVELGDAVVKGS--------FKL 118 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 + +A +V +TD+ G R + +G AG F D P G+Y + + A +G Sbjct: 119 ESSASEVGMILTDRGGTEYR-VSLGAKQAGDVDFNIDPA---EHGLPPGNYKLRVVADSG 174 >UniRef50_B9NLP1 Basal-body rod modification protein FlgD n=2 Tax=Rhodobacteraceae RepID=B9NLP1_9RHOB Length = 221 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 33/208 (15%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL +L Q +NQDP P++++E SQLAQ S V Q +QA+ Sbjct: 32 TFLRMLTVQARNQDPLEPLDSSEYASQLAQFSMV-------------------EQQVQAN 72 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGA-VTTTTPFGVELQ---------QAADKVTATITDKN 143 L+ + G+ L S G V T PF + Q +AD+ + D Sbjct: 73 ALLSDLSLTLGSVNLNQLASWVGMDVRTDAPFRFDDQPVAIFASAEPSADRAELVVRDSQ 132 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ-FALV 202 G R +D + F W G G+ P G+Y+ A+++ + G L P F+ V Sbjct: 133 G---RVVDRRAVPVDQAEFEWAGVDGAGNALPAGTYSAALASFDNGELLAETPAAVFSRV 189 Query: 203 QGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G+ L L + ++D + QI Sbjct: 190 VEAQVGDGAVMLTLNSGAEVSVDTITQI 217 >UniRef50_Q2RRB2 Flagellar hook capping protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRB2_RHORT Length = 229 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 25/160 (15%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FLT+L QLKNQ+P NP + NE+T QL S V QI +Q L+ N Sbjct: 34 FLTVLTTQLKNQNPLNPTDPNEMTQQLISYSQV-------------EQQILGNQYLE--N 78 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE-------LQQAADKVTATITDKNGAVV 147 L+ T LA G E + F E + ++A V+ +T+ G V+ Sbjct: 79 LVLSTNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKMTVPESAKSVSFVVTNAKGDVI 138 Query: 148 RT-IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + + E +G ++FTWDG T GS A +GSY + A+ Sbjct: 139 YSKTETPE--SGAYTFTWDGATTAGSKAVDGSYTLTAKAT 176 >UniRef50_A6FKY3 Possible FlgD protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FKY3_9RHOB Length = 233 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 13/182 (7%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 TT+ + + ++D ++ FL +L AQ++NQDP NP+E+ + QLA STV + N Sbjct: 27 TTAEAPPKPALSSDFET-FLKMLTAQMRNQDPLNPVESADFAVQLATFSTVEQQVRTNDL 85 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 L ++ ++ Q S +G L G VT T P V L AA V Sbjct: 86 LETLGDRMGAMGMSQLSGWVGMEARAIAPVQLDG-----APVTLTVP-PVPLADAAQIVA 139 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 D G +V+ D+ + G + W G +G+ P+G Y++A+ + + G L P Sbjct: 140 ---RDSTGTIVQRSDV-SIEGG--TLQWAGVGPNGAPLPSGRYDLAVESFSNGESLGETP 193 Query: 197 LQ 198 +Q Sbjct: 194 VQ 195 >UniRef50_Q1GP08 Flagellar hook capping protein n=2 Tax=Sphingomonadales RepID=Q1GP08_SPHAL Length = 100 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 38/53 (71%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 QS FL L+ AQL QDP NP++N E+ +Q+AQ S+++GI + NT L IS Q+ Sbjct: 24 QSDFLRLMTAQLSQQDPFNPVDNTEMVAQMAQFSSLAGISETNTVLAQISEQL 76 >UniRef50_Q0ARV5 Flagellar hook capping protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARV5_MARMM Length = 221 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 13/161 (8%) Query: 29 ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ 88 AD FLTLL Q+KNQDP NP+++ + +QL S+V N L ++ + Sbjct: 23 ADNFEMFLTLLTEQMKNQDPLNPLDSTQFVNQLVDFSSVEQQIAQNQNLENLLLLQSAAA 82 Query: 89 SLQASNLIGH--GVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAV 146 + + IG + P + G S E V + A + I D++ + Sbjct: 83 QSASVSYIGRVATALTPQAMLANGEASWEYNVP----------EEATTSSIIIRDEDDRI 132 Query: 147 VRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 V D GE TAG H FTWDG G+ +G Y++ I A N Sbjct: 133 VARRD-GETTAGTHDFTWDGLGDGGAALDDGVYSMEIIAQN 172 >UniRef50_C1A556 Putative flagellar basal-body rod modification protein FlgD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A556_GEMAT Length = 267 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/46 (54%), Positives = 34/46 (73%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + FL +LVAQLKNQDP NPM+ ++ +QLAQ STV + K+N +L Sbjct: 52 RDEFLKMLVAQLKNQDPLNPMDGKDMAAQLAQFSTVEQLLKMNESL 97 >UniRef50_Q5LMU9 Basal-body rod modification protein FlgD n=1 Tax=Ruegeria pomeroyi RepID=Q5LMU9_SILPO Length = 222 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 13/191 (6%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 V +T P T + +++ S ++D +F+ +L Q K Q+P P++++E +QLAQ Sbjct: 5 VHSTRPGATSQAPQTTTPEKRSLSSDF-DTFIRMLTTQAKYQNPLEPLDSSEYAAQLAQF 63 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V K N TL ++ ++ + + SN IG V + +G T +P Sbjct: 64 SMVEQQTKTNDTLTALVEKLGATDMAKLSNWIGKEVRA------VAPANFDGTPVTISPA 117 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 + AADK + D G T++ ++ +W G DG NG Y+ A+ Sbjct: 118 PL---AAADKAFLVVRDAKG---ETVERYQVPVSADPISWSGLNDDGEPRDNGLYSFAVQ 171 Query: 185 ASNGGTQLVAQ 195 + L+ + Sbjct: 172 SYKADELLLEE 182 >UniRef50_A9CK64 Hook formation protein n=8 Tax=Rhizobiaceae RepID=A9CK64_AGRT5 Length = 157 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 14/119 (11%) Query: 21 SSLTGSNAADLQ-SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 +S + NAA L SFL LL+AQ+KNQDPT+PM+ + SQLA S V K NT L S Sbjct: 19 ASSSDKNAASLNYDSFLKLLIAQMKNQDPTSPMDAGQQMSQLASFSQVEQTIKTNTHLKS 78 Query: 80 ISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG---VELQQAADKV 135 + LQA L ++ G TV++ G V F V + +A DKV Sbjct: 79 M---------LQAEALTRASDLV-GKTVMSADDKVTGVVKEVQVFSDGIVAVTEAGDKV 127 >UniRef50_A8MHE3 Flagellar hook capping protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MHE3_ALKOO Length = 141 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 11/112 (9%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG-------QI 84 + +FL LLV QLKNQDP NPM++ + +Q+AQ S++ ++ LNTTL + Q+ Sbjct: 31 KDAFLNLLVTQLKNQDPLNPMDDRDFIAQMAQFSSLEQMQNLNTTLTNTQSSIMEHITQM 90 Query: 85 DNSQSLQASNLIGHGVMI-PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 +N+ +N++ V I G L G E V G ++++ DK+ Sbjct: 91 NNNFVKSQTNIVDQLVKINEGLRKLTGENPEVPEVPKE---GDKVEEGTDKI 139 >UniRef50_C1PG44 Flagellar hook capping protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PG44_BACCO Length = 215 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 16/146 (10%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 T++S+ TGS D + +FL +L+AQL+NQDPT PM++ + SQ+AQ S++ + L + Sbjct: 18 TATSTRTGSKTLD-KDAFLKILIAQLQNQDPTKPMDDTQFVSQMAQFSSLEQMTNLKNDI 76 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGT--------TVLAGTGS-------EEGAVTTTT 122 ++ SQ + + IG V T +V +GTG+ ++ AVT T Sbjct: 77 DNLIKLSQQSQQIAYTQYIGRTVSWEKTETADDGTASVKSGTGTITGISFGDDNAVTFTL 136 Query: 123 PFGVELQQAADKVTATITDKNGAVVR 148 G ++ + + + T K A+++ Sbjct: 137 DDGTKISSSDMRGINSNTSKEAALIQ 162 >UniRef50_A3ZNY0 Probable basal-body rod modification protein FlgD n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNY0_9PLAN Length = 169 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 3/66 (4%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL L++A+L+NQDP PM+N+E+ Q+ QI ++ E+L+TTL ++ +D L A+ Sbjct: 4 FLKLMIAELQNQDPMEPMKNSEMLEQIGQIRNITATEQLSTTLTNV---LDGQNILSATT 60 Query: 95 LIGHGV 100 LIG V Sbjct: 61 LIGGQV 66 >UniRef50_B5YIG3 Flagellar hook capping protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIG3_THEYD Length = 137 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 7/94 (7%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 TG++ D + +FL LL AQLK QDP NPM+N E QLA S + + +N TL Q Sbjct: 22 TGNSQID-KEAFLKLLTAQLKYQDPLNPMDNTEFVGQLAMFSALEQVININNTL----EQ 76 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGA 117 + NSQ + +IG ++ G T++ G+E A Sbjct: 77 LANSQVYSNALMIGSTII--GKTIVTTDGTEYKA 108 >UniRef50_A1HN34 Flagellar hook capping protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN34_9FIRM Length = 136 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 10/69 (14%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + FL LLVAQL+ QDP PME+ E +Q+AQ S++ I+ LN+T+ ++Q Sbjct: 29 KDDFLKLLVAQLRYQDPMKPMEDKEFIAQMAQFSSLEQIQNLNSTMV----------TMQ 78 Query: 92 ASNLIGHGV 100 A LIG V Sbjct: 79 AMGLIGKTV 87 >UniRef50_A3V1Q8 Possible FlgD protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1Q8_9RHOB Length = 183 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 21/164 (12%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL---NTTLGSISGQIDNSQSLQASN 94 +L AQ+KNQDP NP+E+ + +QLA T SG+E+ N L +S QI S ++ Sbjct: 1 MLTAQMKNQDPLNPVESADFATQLA---TFSGVEQAVLTNDLLRGLSLQIGVS---GLAS 54 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 +G V P +GA T P + A + V + D +GAVV Sbjct: 55 WVGKEVRAPAPVYF------DGAPVTLHPNPMAAATAGEIV---VRDASGAVVHRFASPA 105 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ 198 T V WDG +G P+G Y+ A ++ + G L P++ Sbjct: 106 TTDPVQ---WDGVGRNGVVVPDGVYSFAFASLSDGEVLGENPVE 146 >UniRef50_UPI00016C5509 Flagellar hook capping protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5509 Length = 120 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 7/89 (7%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q FL LL+AQL+NQDP +P+ N + QLA ++TVSGI+ LN + S + Q Q Sbjct: 13 QDQFLQLLIAQLQNQDPLDPVSNQDFIQQLATLNTVSGIQSLN---ANFSEMLKLQQITQ 69 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 ++L+G + L G ++ G VT+ Sbjct: 70 GADLVGKTI----EYTLTGEPAKTGKVTS 94 >UniRef50_C5CYE7 Flagellar hook capping protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYE7_VARPS Length = 133 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 21/142 (14%) Query: 22 SLTGSNAADLQSS------FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 +++GS A +LQ+S FL +L+ QL QDP PM+N E +Q+AQ +++ ++LN Sbjct: 5 AISGSTATNLQASSLGMEDFLKILLTQLTYQDPLKPMDNQEFMAQMAQFTSLEQTQQLNN 64 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 + ++ I N +LQ+ LIG V + T GAVT T L + D Sbjct: 65 KIETL---ITNQAALQSVGLIGKTVDVNTPT---------GAVTGTVS---ALSLSGDAP 109 Query: 136 TATITDKNGAVVRTIDIGELTA 157 T+ GAV+ I + +L A Sbjct: 110 LLTVRTAAGAVLANISLSQLAA 131 >UniRef50_A1VXC7 Flagellar hook assembly protein n=15 Tax=Campylobacter RepID=A1VXC7_CAMJJ Length = 294 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 17/186 (9%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG-------IEKLNTTLGSISGQI 84 + +FL LL+ +L++QDPT+PM+++++ +Q +Q+S + ++K+ T+ +S Sbjct: 48 KDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSF 107 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK--VTATITDK 142 S S A IG + + TG++E + L + +D+ VT I D Sbjct: 108 STSMSTSALGAIGKMATVSDNKIKL-TGADE-----LIALKMYLPEDSDENGVTLEIYDS 161 Query: 143 NGAVV--RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA 200 N +V D ++ G+ + W G DG A +G Y V + +N + + Sbjct: 162 NNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTY 221 Query: 201 LVQGVI 206 ++GV+ Sbjct: 222 PIEGVV 227 >UniRef50_B6JMC9 Flagellar hook assembly protein n=13 Tax=Helicobacter RepID=B6JMC9_HELP2 Length = 339 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 37/188 (19%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL-------------- 77 +++F+ L + QLKNQDPT PME +++ +Q AQ++ V E+ T+ Sbjct: 30 KNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETN 89 Query: 78 -------GSISGQIDN-----SQSLQASNLIGH-----GVMIPGT---TVLAGTGSEEGA 117 G++ ++N SL+A+N + V + G T ++G + Sbjct: 90 ESLKDFQGALKDTMENLNKGMDDSLEANNALREVSALNSVSMIGKIAETDVSGANFDGNN 149 Query: 118 VTTTTPFGVELQQAADKVTA-TITDKNGAVVRTIDIGELT--AGVHSFTWDGTLTDGSTA 174 + + F E A+ V A I ++N +V+TI + + G +F WDGT G Sbjct: 150 KLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKV 209 Query: 175 PNGSYNVA 182 P GSY + Sbjct: 210 PKGSYKIK 217 >UniRef50_Q28JI8 Basal-body rod modification protein FlgD n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JI8_JANSC Length = 221 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 12/154 (7%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL LL Q++NQDP NP ++ E T+QLA S V + N L + + Q S Sbjct: 33 FLRLLTTQMQNQDPLNPSDSTEYTAQLATFSGVEQQVETNDLLRDLQASFASMNMGQLSG 92 Query: 95 LIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGE 154 IG + TG T F AD+V + ++ G VV + Sbjct: 93 WIGMEAR--ADMPVNFTGQPTTVQITPNSF-------ADRVELVVRNQAGDVVAST---P 140 Query: 155 LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 G F WDG DG PNG+Y ++ + +G Sbjct: 141 AVLGQEPFAWDGRGNDGFPLPNGTYTLSAQSWSG 174 >UniRef50_C8W1G3 Flagellar hook capping protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G3_DESAS Length = 134 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 12/104 (11%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL L + QLKNQDP +P + N +Q+AQ S + + LNT SI+ ID + Sbjct: 27 KEAFLKLFIEQLKNQDPLSPQDPNAFMNQMAQFSVMEQLMNLNT---SITQLIDLQNLTE 83 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 A++L+G VM+ G +G + T V+++Q A+K+ Sbjct: 84 AASLVGRTVMVTGA---------DGTEISGTVEKVQIRQNANKI 118 >UniRef50_C3MG46 Predicted flagellar hook capping protein FlgD n=2 Tax=cellular organisms RepID=C3MG46_RHISN Length = 148 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 59/117 (50%), Gaps = 19/117 (16%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL-QA 92 SFL LL+AQ++NQDPT+PM+ E SQLA S V K N+ L S+ S+SL QA Sbjct: 37 SFLKLLIAQMQNQDPTDPMDATEQISQLATFSQVEQSIKTNSNLESLLA----SESLTQA 92 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 S IG T+ + G G V E++ +D VTA TD + T Sbjct: 93 STYIGK-------TITSSDGKTSGVV-------AEVEVTSDGVTAITTDGKEIAIET 135 >UniRef50_D2LSH3 Flagellar hook capping protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSH3_BACS4 Length = 149 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%) Query: 25 GSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 N DL + +FL +L+ QL+NQDP NPME+ E +Q+AQ +++ + +NT L Sbjct: 20 ARNTGDLDKDAFLRILITQLQNQDPLNPMEDKEFIAQMAQFTSLEQMTNMNTNLQKFLDS 79 Query: 84 IDNSQSLQASNLIGHGVMIPGTTV 107 N Q + S LIG V V Sbjct: 80 HQN-QFVSHSELIGKEVQWERERV 102 >UniRef50_C0QPA6 Flagellar hook capping protein FlgD n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA6_PERMH Length = 215 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 22/184 (11%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS--- 89 FL +L+A L+ QDP ++ N++T + + +E LN+ ++ + +++ Sbjct: 29 EDFLKVLLADLQWQDP---LQANDITDFIQNTVKLREMEVLNSFQETVELLKETNEANSL 85 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 L AS LIG V+ G G ++ F L AD VT T+ DK G VV T Sbjct: 86 LYASGLIGKKVVYEGNQTFVENGR------SSVSF--RLDDNADIVTVTVMDKQGNVVET 137 Query: 150 IDIGELTAGV-HSFTWDG-TLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIR 207 L GV + F D LTDG Y V I A+ G+ + + LV+ V+R Sbjct: 138 ESFSNLQGGVDYPFEIDNPNLTDGY------YTVYIEATKDGSPVKSSVKSLGLVESVVR 191 Query: 208 GNSG 211 + G Sbjct: 192 ESDG 195 >UniRef50_C7BXG3 Flagellar hook assembly protein FlgD n=5 Tax=Helicobacter RepID=C7BXG3_HELPB Length = 306 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 37/188 (19%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL-------------- 77 +++F+ L + QLKNQDPT PME +++ +Q AQ++ V E+ T+ Sbjct: 30 KNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETN 89 Query: 78 -------GSISGQIDN-----SQSLQASNLIGH-----GVMIPGT---TVLAGTGSEEGA 117 G++ ++N SL+A+N + V + G T ++G + Sbjct: 90 ESLKDFQGALKDTMENLNKGMDDSLKANNALREVTALNSVSMIGKIAETDVSGANFDGNN 149 Query: 118 VTTTTPFGVELQQAADKVTA-TITDKNGAVVRTIDIGELT--AGVHSFTWDGTLTDGSTA 174 + + F E A+ V A I ++N +V+TI + + + G +F WDGT G Sbjct: 150 KLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYSGQKGYINFEWDGTNEKGEKV 209 Query: 175 PNGSYNVA 182 P G+Y + Sbjct: 210 PKGNYKIK 217 >UniRef50_A8LNK4 Flagellar hook capping protein FlgD n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LNK4_DINSH Length = 220 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 15/193 (7%) Query: 9 DP---TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 DP T T S S+ T + A +FL +L QL+NQDP P+ + +L QLA S Sbjct: 2 DPVTTTRTATPQPSGSAQTATAIASDFETFLRMLTTQLENQDPLEPVASQDLAVQLATFS 61 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 V + N+ L + Q+ Q ++ +G + G G+ E Sbjct: 62 GVEQQTQTNSLLEDLGSQMGLMSLSQLASWVGMDALAEGNVHFDGSPVE---------IK 112 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 + A+K + ++G V+ L G + W G +G+ P+G YN+ + A Sbjct: 113 PNIPALAEKAELVVYRRDGTEVQR---NTLEPGTETVLWAGVGANGNPLPSGVYNLQVEA 169 Query: 186 SNGGTQLVAQPLQ 198 L +P+Q Sbjct: 170 FANNESLPTKPVQ 182 >UniRef50_D2TJ83 Lateral flagellar rod protein n=2 Tax=Citrobacter RepID=D2TJ83_CITRO Length = 270 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 52/87 (59%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 +FLTL VA+++NQDPT+P + + QL+ ++ V+ +E+++ + + + N Q + Sbjct: 65 ETFLTLFVAEIQNQDPTDPADPTDYIDQLSSMAQVAMMEEMSVQANTNAVLMSNIQVMAL 124 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVT 119 NL+G +M+ TT+ + EG VT Sbjct: 125 GNLVGDDIMVQTTTLQVSDSAIEGRVT 151 >UniRef50_UPI00016996F7 flagellar basal body rod modification protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996F7 Length = 115 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 1/106 (0%) Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 +EL A VT IT+ NGA+VR +++G G +F+WDG G A +G Y V A Sbjct: 9 IELPSNASNVTLRITNSNGALVRELELGSHEGGALAFSWDGYDDQGDFAGSGLYQVTAQA 68 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNT-LDLGTYGTTTLDEVRQI 230 + G ++ A V+ V G SG L+L G ++++V++I Sbjct: 69 TVDGAEMAPAVHVAAEVESVSLGGSGGVRLNLVGLGQVSMNDVKEI 114 >UniRef50_B1YI97 Flagellar hook capping protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YI97_EXIS2 Length = 156 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 SN+ D + F+ +L+AQL NQDPT PME+ E SQ+AQ S++ ++ + + ++ Sbjct: 22 SSNSMD-KDMFMKILIAQLSNQDPTAPMEDKEFISQMAQFSSLEQMQSIGKGIETMMLNQ 80 Query: 85 DNSQSLQASNLIGHGVMIPGTTV 107 + + SNLIG+ V TV Sbjct: 81 HAAALMNYSNLIGNKVSYESETV 103 >UniRef50_B7XQJ3 Basal-body rod modification protein flgD n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XQJ3_ENTBH Length = 115 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 V + A V+ I+DK+G VVRTID+G +AG F WDG +G AP G+Y A + Sbjct: 5 VAVTAATGNVSIKISDKDGNVVRTIDMGAQSAGSSDFIWDGKNENGEVAPAGTYTFAATT 64 Query: 186 SNGGTQLVAQPLQF-ALVQGVIRGNSGNTLDL---GTYGTTTLDEVRQI 230 N + VA A V V +G + L G G+ L +++ I Sbjct: 65 KNDKGESVAMATSLPATVTSVTLSKTGGEMLLNLAGGMGSVKLSQIQTI 113 >UniRef50_Q7UII1 Probable basal-body rod modification protein FlgD n=1 Tax=Rhodopirellula baltica RepID=Q7UII1_RHOBA Length = 164 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 24/145 (16%) Query: 19 SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLG 78 S S+ G N+ D+ SFL LL+ +L+NQDP +P++N ++ Q+ QI + ++L TL Sbjct: 37 SESANEGYNSLDV-DSFLKLLINELQNQDPLDPVDNAQMVQQIGQIREIGATDQLTNTLS 95 Query: 79 SISGQIDNSQSL-QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 +S NSQ L AS LIG V +G ++ T GV DK+T Sbjct: 96 DLS----NSQQLVTASGLIGRTV--------SGLADDQSNTT-----GV-----VDKITV 133 Query: 138 TITDKNGAVVRTIDIGELTAGVHSF 162 D N A + +G+ T + + Sbjct: 134 ETNDDNQARSVKVHVGQKTMEIENI 158 >UniRef50_UPI0001BCF0E6 flagellar basal body rod modification protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF0E6 Length = 174 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 11/135 (8%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL LLV Q+K QDP +P +N+E SQLAQ S + + ++ L +S +DN + Sbjct: 41 KDAFLQLLVTQMKYQDPLDPQDNSEYLSQLAQFSALEQMTNVSKGLSEVSKIVDN---IN 97 Query: 92 ASNLIGHGVMIPGTTV--LAGTGSEEGAVTTTT----PFGVELQQAADKVTATITDKNGA 145 +S LIG + G V + T E+G ++ + GV + + A + K Sbjct: 98 SSVLIGQLSSMIGQPVQWITETKGEDGQLSKQSFEGKVIGVSITDGTPSIIADVGGKTHQ 157 Query: 146 V--VRTIDIGELTAG 158 V + + IG LTAG Sbjct: 158 VQISKVVRIGRLTAG 172 >UniRef50_A8VS08 Succinyl-CoA synthetase, alpha subunit n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS08_9BACI Length = 161 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL LL+ QL+NQDP +PME+ E SQ+A S++ + +N + SQ Sbjct: 33 KDAFLKLLITQLQNQDPLDPMEDKEFISQMANFSSLEQMTNMNENMNKFLESQQQSQFFS 92 Query: 92 ASNLIGHGV 100 S++IG + Sbjct: 93 HSDMIGKQI 101 >UniRef50_A3SKB3 Possible FlgD protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKB3_9RHOB Length = 227 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 27/195 (13%) Query: 12 NTGVSTTSSSSLTGSNA--ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 +G ++T + S + S A AD ++ FL +L Q++NQDP NP+E + QLA STV Sbjct: 15 QSGQASTQAESDSSSRAISADFET-FLKMLTVQMRNQDPLNPVEGTDFAVQLATFSTVEQ 73 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 + N LG++ Q+ Q +G G P + L Sbjct: 74 QVRTNDLLGALGNQLGGLGFGQLLGWVGMEARTTAPVAFDG-----------APVDLVLP 122 Query: 130 QA--ADKVTATITDKNGAVVRTIDI----GELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 + AD+ +T+ G V+ + GEL TW DG PNG Y + + Sbjct: 123 EIALADRAEMVVTNARGVEVQRQTVPASGGEL-------TWVAVDEDGDPLPNGVYTLTV 175 Query: 184 SASNGGTQLVAQPLQ 198 L +QP++ Sbjct: 176 EGYASDALLGSQPVE 190 >UniRef50_A4XIY2 Flagellar hook capping protein n=2 Tax=Clostridia RepID=A4XIY2_CALS8 Length = 169 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 10/70 (14%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + FL LLV QL+ QDP PME+ E +QLAQ S + ++ LN + I Q Sbjct: 32 KQEFLNLLVTQLRYQDPLKPMEDKEFVAQLAQFSALEQMQNLNESFELIKAQ-------- 83 Query: 92 ASNLIGHGVM 101 N+IG V+ Sbjct: 84 --NMIGRYVV 91 >UniRef50_A1UTS5 Flagellar hook capping protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTS5_BARBK Length = 190 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 6/56 (10%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL------GSISG 82 +F+ LLVAQ+KNQDPTNPM + E +QLA S V K+N L G+ISG Sbjct: 34 DTFVKLLVAQMKNQDPTNPMNSTEFVAQLASFSMVEQAIKMNDKLEQVLANGAISG 89 >UniRef50_A6TRQ2 Flagellar hook capping protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRQ2_ALKMQ Length = 134 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Query: 25 GSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLG 78 N +DL + +FL LLV Q+ NQDP NPME+ E SQ+AQ S++ ++ LN L Sbjct: 20 KKNTSDLDKDAFLKLLVTQMSNQDPLNPMEDREFISQMAQFSSLEQMQNLNDGLK 74 >UniRef50_Q9KA39 Flagellar hook assembly protein n=2 Tax=Bacillus RepID=Q9KA39_BACHD Length = 171 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + FL +L+AQL+ QDP NPM++ E +Q+AQ S++ + +N+ + Q + +Q Sbjct: 28 KDDFLRILIAQLQYQDPLNPMDDREFIAQMAQFSSLEQMTNMNSAIQQFVKQQTSQTLVQ 87 Query: 92 ASNLIGHGV 100 S LIG V Sbjct: 88 HSELIGKRV 96 >UniRef50_B2IG35 Flagellar hook capping protein n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IG35_BEII9 Length = 141 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 19/119 (15%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 SSFL LLVA+LKNQDPT+P + + SQLA S+V + N+ L S+ L A Sbjct: 36 SSFLQLLVAELKNQDPTSPTDPTQYMSQLASFSSVEQQVQTNSKLDSL---------LTA 86 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 S+L G + G T+ + GS G V + T TAT T NG V+ D Sbjct: 87 SSL-GQAETVIGKTITSADGSISGKVQSVT---------VSSGTATATLDNGGQVKLAD 135 >UniRef50_A3IF23 Flagellar basal body rod modification protein D n=2 Tax=Bacillaceae RepID=A3IF23_9BACI Length = 229 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + +FL LL+ QL++QDPTNPM + E SQ+AQ S++ ++ + + S+ +Q + Sbjct: 37 KDAFLQLLITQLQHQDPTNPMNDREFISQMAQFSSLEQMQNMTKAVESLLASQQQTQMMN 96 Query: 92 ASNLIGHGV 100 + +G V Sbjct: 97 YATFVGKEV 105 >UniRef50_A3K323 Possible FlgD protein n=1 Tax=Sagittula stellata E-37 RepID=A3K323_9RHOB Length = 188 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L Q++NQDP NP+++ E +QLA S+V + N L +IS + + + IG Sbjct: 1 MLTVQVQNQDPLNPVDSTEYATQLATFSSVEQQVQTNELLRNISATLGGNSLNEFGRWIG 60 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 ++ + G A T P + + AD+ + D G V+ DI Sbjct: 61 MEGLVRAPAMFDGV-----APVTIRP---DFSEDADRAVLVVRDAAGEEVQRFDI---DV 109 Query: 158 GVHSFTWDGTLTDGSTAPNGSYNVAISA 185 G + W G ++G+ P G Y + + Sbjct: 110 GEDAVVWGGHDSEGNALPVGVYRFDVES 137 >UniRef50_C4V0N7 Possible flagellar basal body rod modification protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0N7_9FIRM Length = 168 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 5/96 (5%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N+A + +FL LLV Q++ QDP NP +N E SQLAQ S + + ++ L +S +DN Sbjct: 30 NSALGKDAFLQLLVTQMRYQDPLNPQDNAEYLSQLAQFSALEQMTNVSKGLEKVSKIVDN 89 Query: 87 SQSLQASNLIGHGVMIPGTTV--LAGTGSEEGAVTT 120 + +S LIG + G + + T ++GAVT Sbjct: 90 ---IDSSVLIGQLSSMIGQPIQWITETKGKDGAVTK 122 >UniRef50_UPI00016996F8 flagellar basal body rod modification protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996F8 Length = 113 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 33/47 (70%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 F+ L+V +L +QDP PMEN EL +Q++Q + VSGI+ LN + +S Sbjct: 33 FMNLMVTELTHQDPFKPMENTELATQISQFAAVSGIDDLNKSFTGLS 79 >UniRef50_Q7NXC4 Basal-body rod modification protein FlgD n=1 Tax=Chromobacterium violaceum RepID=Q7NXC4_CHRVO Length = 225 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 F+TLL+AQ++NQ P +P + ++ SQLAQ+S + + + L S + Q + Sbjct: 39 FMTLLLAQIRNQSPLDPADPSQFVSQLAQMSQMQSTQDMLKQLQSQGAMLRELQGVALGA 98 Query: 95 LIGHGVMIPGTTVLA-GTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 +G V++ + + G G G +T + G E + T +TD G R I++G Sbjct: 99 QVGKPVLLQTDRIRSDGQGELNGRLTLS---GQE-----ESATLILTDAAGQRTR-IELG 149 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 + AG F L D A G+Y V +S ++G Sbjct: 150 KREAGASDFKI--KLADYHLAA-GNYQVELSTASG 181 >UniRef50_A9HHB6 Flagellar hook capping protein n=2 Tax=Acetobacteraceae RepID=A9HHB6_GLUDA Length = 258 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 11/173 (6%) Query: 47 DPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTT 106 DP++PM ++ T +LAQ + V + NT L ++ + SQ ++L+G TT Sbjct: 67 DPSSPMSSDTFTQELAQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTATADSTT 126 Query: 107 VLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG 166 + GS + T T A + V + + +G VV+ + + +G +++TWDG Sbjct: 127 LPLQNGSASLSFTGT---------AGETVAIAVANSSGTVVKDV-VATADSGTNTWTWDG 176 Query: 167 TLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDLGT 218 T G+ +G+Y+VA+ N A P + + GV +G++ ++G+ Sbjct: 177 TDNSGNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGS 229 >UniRef50_C0GJH6 Flagellar hook capping protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJH6_9FIRM Length = 141 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 44/76 (57%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT T +T S+ TG+ + FL LLV QL+ QDP +P +N+E +Q+AQ Sbjct: 1 MTTVSAAGTTAATQQSNKATGAMQEMDKDMFLQLLVTQLRYQDPLDPQDNSEFVAQMAQF 60 Query: 65 STVSGIEKLNTTLGSI 80 +++ ++ LN T+ + Sbjct: 61 TSLEQMQNLNNTMAKL 76 >UniRef50_Q8EQX6 Flagellar hook assembly protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQX6_OCEIH Length = 172 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN---SQ 88 + FL LL+ QL+NQDPT PM++++ SQ+A T S +E++ SI ++N S Sbjct: 25 KDEFLKLLMVQLQNQDPTKPMDDSQFMSQMA---TFSSLEQMMNMSNSIEMLVNNSLVSP 81 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LQ S++IG V T TG E G T+ Sbjct: 82 VLQYSHMIGEEV--SYMTFDEETGKETGIETS 111 >UniRef50_A1B2H8 Flagellar hook capping protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B2H8_PARDP Length = 221 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 25/216 (11%) Query: 19 SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK---LNT 75 S S+ + S +AD FL +L Q+KNQDP NPM + + QLA T SG+E+ N Sbjct: 19 SFSAPSESGSADQFEMFLKMLTTQIKNQDPLNPMNSTDFAVQLA---TFSGVEQQVQTNL 75 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 L + I+ + Q SN IG V TP +E++ AD Sbjct: 76 LLTQLLQNINGGELGQFSNWIGREVRTTSPVWF-----------DQTPLTLEIEGTADAE 124 Query: 136 TA---TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL 192 TA T+ D+ V+R G ++ V +W G G+ G Y+ + G L Sbjct: 125 TAFLVTLDDQGNEVLRQ-STGAISGEV---SWHGEDPSGNMLATGFYSFRLEEMKDGRSL 180 Query: 193 VAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + ++ + GV +G L L G+ +D V Sbjct: 181 APRDVAAYSRITGVELSRNGPELILLGGGSVRVDTV 216 >UniRef50_B0THA9 Flagellar hook capping protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THA9_HELMI Length = 188 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 27/114 (23%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS----- 68 G +T S+S G + FL LLV QL+ QDP PME+ E +Q+AQ S++ Sbjct: 17 GTTTKKSNSQLGKD------DFLKLLVTQLRYQDPMKPMEDKEFIAQMAQFSSLEQMKNI 70 Query: 69 --GIEK-----------LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLA 109 G EK LN L I Q +QA N+I V G + A Sbjct: 71 ADGFEKFQSSQQKAMTGLNDVLAKF---ISVQQQMQADNMIVSAVSFVGKQLEA 121 >UniRef50_C4Z5G4 Flagellar basal-body rod modification protein FlgD n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5G4_EUBE2 Length = 185 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 10/99 (10%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 +++T D NT +S+T ++ +G+ + FL L+VA+++NQDP P +N++ +QLA Sbjct: 16 SLSTKDDVNTNISSTGKNNSSGNKTTLDVNEFLQLMVAEMQNQDPLEPTDNSDYMAQLAT 75 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI 102 + V +++NT N+ AS+L+G V++ Sbjct: 76 FTQVEATKEMNT----------NTLQGMASDLVGKQVIM 104 >UniRef50_C0A7A5 Flagellar hook capping protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A7A5_9BACT Length = 144 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q+ F LL QL+ QDP NP+++ + +QLAQ S ++ E L T +G + I Q Sbjct: 30 QADFFKLLSVQLQKQDPLNPVDDTQFLAQLAQFSALAQSEALVTQMGYLRADI---QMQA 86 Query: 92 ASNLIGHGVMI 102 A+ L+G V + Sbjct: 87 AAGLVGKEVTV 97 >UniRef50_C8WWF2 Flagellar hook capping protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWF2_ALIAD Length = 159 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 56/92 (60%), Gaps = 2/92 (2%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 ++ F+ LLV QL+NQDP NP++N ++ +QLAQ S + + ++ T + + N +S + Sbjct: 45 ENDFMQLLVTQLQNQDPLNPVDNTQMLAQLAQFSALEEMTQVAQTDAQVLSAVQNLES-E 103 Query: 92 ASNLIGHGVMIPGTTVLAGTGSE-EGAVTTTT 122 S L+ H ++ TV +G++ +G V++ T Sbjct: 104 MSLLMAHSLIGASVTVQDASGNQVQGTVSSVT 135 >UniRef50_C6WJQ5 Flagellar hook capping protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJQ5_ACTMD Length = 139 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +FL LLVAQLK QDP+NP ++ +Q AQ+++V +KLN+ + + + S QA+ Sbjct: 32 AFLKLLVAQLKYQDPSNPTDSTAFMAQTAQLTSV---DKLNSIAQQQTQLVASQLSAQAA 88 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 L+G V T +G + ++T FG Sbjct: 89 GLVGREV-----TYTTASGERASGIVSSTTFG 115 >UniRef50_A6W8K4 Flagellar hook capping protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8K4_KINRD Length = 175 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 4/93 (4%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 N + TS+S+ D + +FL LLVAQLK QDP+ P + + +Q AQ S + ++ Sbjct: 30 NANKTDTSASAAVAKTKTD-KDTFLKLLVAQLKYQDPSKPADTTQFMAQTAQFSALETMQ 88 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPG 104 ++ + GS+ + LQAS LIG V G Sbjct: 89 EVAASSGSM---LAAQNKLQASTLIGQIVSYTG 118 >UniRef50_C5RFU5 Flagellar hook capping protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFU5_CLOCL Length = 217 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 27/127 (21%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSS----FLTLLVAQLKNQDPTNPMENNELTSQL 61 T T+ N GV T + + G+ D +++ F+ LL AQLKNQDP+NP ++ + +Q+ Sbjct: 14 TETNKANNGV-VTGTKTANGTKIVDGKTTDKNMFVRLLSAQLKNQDPSNPADSTQYVAQM 72 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVM----------IPGTTVLAGT 111 AQ S + + LNTT+ S A+NL+G V+ I GT +AGT Sbjct: 73 AQFSALEQMTNLNTTMTFSS----------ANNLVGKTVVTKYTDEKGNYITGT--VAGT 120 Query: 112 GSEEGAV 118 ++G V Sbjct: 121 TQKDGNV 127 >UniRef50_C4L629 Flagellar hook capping protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L629_EXISA Length = 142 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 41/66 (62%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 F+ LL+AQ+ NQDP +PME+ E +Q+AQ S++ ++ ++ L S+ S + S+ Sbjct: 30 FMKLLLAQIANQDPMSPMEDKEFIAQMAQFSSLEQMQAISKQLDSVLVDRHMSSISEYSS 89 Query: 95 LIGHGV 100 +IG + Sbjct: 90 MIGKTI 95 >UniRef50_D2NZF9 Flagellar basal body rod modification protein n=15 Tax=Listeria RepID=D2NZF9_LISMO Length = 140 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 13 TGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 +G S +++++T S + L + F+ L + L+ QDP++P++ NE+ SQ+AQ+S + + Sbjct: 8 SGASQDTNNAVTSSVSKTLGKDDFMKLFLTSLQYQDPSSPLDTNEMMSQMAQLSLMEQVA 67 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGV 100 + T + +S Q NS A N IG + Sbjct: 68 NMTTAVDKLSEQAQNSALQSAVNFIGKDI 96 >UniRef50_D2R532 Flagellar hook capping protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R532_9PLAN Length = 145 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 5/68 (7%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL-QA 92 FL L++ +L NQDP NPM+N ++ Q+ QI ++ +KL+ TL S+ QSL A Sbjct: 32 EFLQLMITELTNQDPLNPMDNAQMVEQIGQIREIASNDKLSRTLDSVL----TGQSLTTA 87 Query: 93 SNLIGHGV 100 S LIG V Sbjct: 88 SGLIGREV 95 >UniRef50_C6P7Q6 Flagellar hook capping protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Q6_CLOTS Length = 135 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Query: 8 TDPTNTGVST-TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T+ N+ ++T T + +T N+ ++ +L LLV QL+NQDP NPM++ E +Q+AQ S Sbjct: 5 TNYDNSYINTYTDGTKVTNPNSELGKNEYLQLLVTQLENQDPLNPMDDKEFIAQMAQFSA 64 Query: 67 VSGIEKLNTTLGSISG 82 + + LN + ++ Sbjct: 65 LEQMLNLNNSFNAVKA 80 >UniRef50_B7J1L2 Flagellar hook capping protein n=21 Tax=Borrelia RepID=B7J1L2_BORBZ Length = 147 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 26 SNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 SN +L + FL LL+ QL+ QDPTNPM++ E +Q+AQ S + + ++ + +S + Sbjct: 31 SNKVNLGKDDFLKLLITQLRYQDPTNPMKDKEFIAQMAQFSALEQMANMSRSFEKLSSSL 90 Query: 85 DNSQSL 90 + + L Sbjct: 91 EIRKDL 96 >UniRef50_A8RWD5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWD5_9CLOT Length = 233 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 10/66 (15%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FLTL+VAQLKNQD NP+++ + +QLAQIST+ +E++ N++S ++ Sbjct: 99 FLTLMVAQLKNQDFMNPVDDTQYVTQLAQISTMQQMEEMAY----------NAKSSYVAS 148 Query: 95 LIGHGV 100 L+G V Sbjct: 149 LVGKNV 154 >UniRef50_B9J992 Flagellar basal-body rod protein n=8 Tax=Rhizobium/Agrobacterium group RepID=B9J992_AGRRK Length = 158 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL LL+AQ+K QDPT+PM+ + SQLA S V + N+ L ++ + N QAS+ Sbjct: 33 FLKLLIAQMKTQDPTDPMDATQQISQLASFSQVEQQIQTNSHLETV---LQNQWISQASD 89 Query: 95 LIGHGVM 101 IG +M Sbjct: 90 YIGKEIM 96 >UniRef50_B8FTP2 Flagellar hook capping protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTP2_DESHD Length = 184 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL----GSISGQIDNS 87 + FL LLVA+L NQDP +PM+N ++ +Q+AQ S++ + ++ ++ G+ NS Sbjct: 34 KDDFLKLLVAELTNQDPLSPMDNKDMITQMAQFSSLEQMNNMSKSMENLVGAFGALFQNS 93 Query: 88 QSLQASNLIGHGV 100 Q + LIG V Sbjct: 94 LLSQGAALIGKHV 106 >UniRef50_A9KNF4 Flagellar hook capping protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNF4_CLOPH Length = 275 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 12/95 (12%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 TNT ++TT+ + L S + +FL LLV Q++NQDP NP + E SQLA T S + Sbjct: 16 TNTAITTTNKTKLGSSELG--KDAFLQLLVCQMQNQDPLNPSTDTEFVSQLA---TFSQL 70 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGT 105 E+L +++ D S QA +L+G V++ T Sbjct: 71 EELQ----NLTASTDKS---QAFSLVGKDVILNAT 98 >UniRef50_C1TKJ1 Flagellar hook capping protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKJ1_9BACT Length = 150 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 32/49 (65%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI 80 + FL L + QLKNQDP PM+ NE+ +Q +Q +TV + +N+++ + Sbjct: 28 KDDFLKLYIEQLKNQDPLEPMDTNEMAAQFSQFTTVEQLMNMNSSMEEM 76 >UniRef50_B6R7Z3 Flagellar hook capping protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7Z3_9RHOB Length = 152 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 9/102 (8%) Query: 7 TTDPTNTGVSTTSSSSL---TGSNAADLQ-SSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + DP T +S+ + GS A L ++FL L + LK+QDPT+P++ E QLA Sbjct: 2 SVDPVGTANGASSNEPVFKPQGSEQAYLDYNAFLMLFMESLKSQDPTDPLDTAEYMGQLA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSL-QASNLIGHGVMIP 103 Q S V K NT L ++ Q S+ QA+NLIG V +P Sbjct: 62 QFSAVEQSTKTNTHLTAMLQQ----HSINQANNLIGATVEVP 99 >UniRef50_C4G362 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G362_ABIDE Length = 317 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 10/71 (14%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 + SFL LL AQ++NQDP P N E SQLA S++ ++ LN T+ NS Q Sbjct: 46 KDSFLKLLCAQMENQDPMQPQSNTEWVSQLATYSSLEQMQNLNATIA-------NS---Q 95 Query: 92 ASNLIGHGVMI 102 A LIG V++ Sbjct: 96 AYGLIGQEVVM 106 >UniRef50_Q18CZ5 Putative basal-body rod modification protein n=5 Tax=Clostridium difficile RepID=Q18CZ5_CLOD6 Length = 202 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI----EKLNTTLGSISGQIDNSQSL 90 F+ +LVAQ+ NQDP NP + E SQLAQ +T+ + EKL+ L + + NS Sbjct: 62 FMKILVAQMGNQDPMNPQDPTEYVSQLAQFATLEKMSAMNEKLDVLLALSNSTLINSALS 121 Query: 91 QASNLIGHGVMIPG 104 A++LIG V + G Sbjct: 122 MATSLIGKEVEVSG 135 >UniRef50_A7GGP7 Flagellar hook capping protein n=10 Tax=Clostridium RepID=A7GGP7_CLOBL Length = 273 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 10/91 (10%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 NTG+ T + + +++F +L A+L NQDPTN + E SQLAQ S++ + Sbjct: 43 NTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPTNAKDGTEYVSQLAQFSSLEQMA 102 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMI 102 LN+ + ++G ASN IG V++ Sbjct: 103 NLNSMM-KLTG---------ASNFIGKVVLL 123 >UniRef50_B9Z4U7 Flagellar basal body rod modification protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4U7_9NEIS Length = 226 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 27/177 (15%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNS------Q 88 F+TLL+AQ+KNQ+P +P + ++ +QL Q++ ++ T+LG +S DN+ Q Sbjct: 35 FMTLLMAQIKNQNPLDPADPSQFVNQLVQMN------QMQTSLGMLSQLKDNAVLLRELQ 88 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 L N +G+ V++ TV G +T L A ++VT +T +G Sbjct: 89 GLGLGNQVGNSVLVQSNTVQLDGTPLSGRLT--------LSGAENQVTLQLTGADGK-QH 139 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 ID+G AG +F+ + D A GSY ++++ ++ T ++ A+VQGV Sbjct: 140 PIDLGAQPAGEVAFSVNP--ADYGLA-AGSYALSVTTASRATPMLE---LAAVVQGV 190 >UniRef50_A3DCN1 Flagellar hook capping protein n=3 Tax=Clostridium thermocellum RepID=A3DCN1_CLOTH Length = 323 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 3/63 (4%) Query: 16 STTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 STT+ S T N +L + FL LL+ QL+ QDP NP+++ E SQ+AQ S + ++ LN Sbjct: 18 STTNKS--TQRNTGELGKDEFLNLLITQLQYQDPLNPVDDKEFISQMAQFSALEQMQNLN 75 Query: 75 TTL 77 + Sbjct: 76 KSF 78 >UniRef50_A0NT13 Flagellar basal-body rod modification protein D n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NT13_9RHOB Length = 131 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 11/61 (18%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE-------KLNTTLGSIS-GQID 85 +FL L++AQ++NQDPTNPM+ +E QLAQ+++ S +E KL T L ++S GQ+D Sbjct: 29 TFLHLMMAQMQNQDPTNPMDASE---QLAQLASFSQVEQSIQTNAKLETLLTNLSFGQVD 85 Query: 86 N 86 + Sbjct: 86 D 86 >UniRef50_C8RX78 Flagellar hook capping protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX78_9RHOB Length = 217 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 28 AADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNS 87 A+D ++ FL ++ QLKNQDP NP+++ + QLA S+V K N+ L ++ Q Sbjct: 25 ASDFET-FLRMMTTQLKNQDPMNPIDSADYAVQLATFSSVEQQAKTNSLLEAMGAQFGLM 83 Query: 88 QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 Q + +GH ++G + ++ FG AD + D G +V Sbjct: 84 GMAQMAGWVGHEARAAAPVWISG---DPVSLAPNPAFG------ADSAVLVVRDFEGNLV 134 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAP--NGSYNVAISASNGGTQLVA 194 ++I A W+ D AP G+Y + S G L+A Sbjct: 135 NRVNI---PASADPLEWEP--VDQLDAPLAEGTYTFQLE-SYAGEDLLA 177 >UniRef50_C6XF41 Flagellar basal body rod modification protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF41_LIBAP Length = 131 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 9/95 (9%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 T +PT S + S G Q +FL LL+ Q+K+QDPT PM+ +E +QLA S Sbjct: 5 TEVNPTQQEFSKSKSKKTLG------QDAFLKLLITQIKHQDPTEPMKASEQVAQLAVFS 58 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 + ++N+TL + + ++ QAS+ IG + Sbjct: 59 QMEQSVQMNSTLQEL---LKSNNLAQASSYIGKNI 90 >UniRef50_UPI0001788768 flagellar hook capping protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788768 Length = 186 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 7/70 (10%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL- 90 + FL++L+ QL++QDP PM++ E +Q+AQ +++ + +NT L ++ SQSL Sbjct: 32 KDQFLSILITQLRHQDPLQPMQDREFIAQMAQFTSLEQLMNINTQLTAM------SQSLG 85 Query: 91 QASNLIGHGV 100 AS+LIG + Sbjct: 86 AASSLIGKQI 95 >UniRef50_D1BD08 Flagellar hook capping protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BD08_SANKS Length = 186 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +F+TLLVAQLK QDP++PM+ E+ +AQ + ++ +EKL T +I+ A+ Sbjct: 40 TFMTLLVAQLKYQDPSSPMDTTEM---MAQTTQLASMEKLTTMTDTIAESFALQMRDAAA 96 Query: 94 NLIGHGV 100 L+G V Sbjct: 97 TLLGKQV 103 >UniRef50_C1ZKQ8 Flagellar hook capping protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKQ8_PLALI Length = 139 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 3/75 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV-SGIEKLNTTLG-SISG 82 G NA D ++ F+ LL+ QL+NQDP+NPM N EL SQ++Q+ + S IE + G ++S Sbjct: 23 GFNALDTEA-FMKLLITQLQNQDPSNPMSNEELLSQISQMRNLTSDIELTDALEGLTLSQ 81 Query: 83 QIDNSQSLQASNLIG 97 Q+++S + + G Sbjct: 82 QLNSSTAFLGKEIKG 96 >UniRef50_D0B5E2 Flagellar hook capping protein n=41 Tax=Rhizobiales RepID=D0B5E2_BRUME Length = 137 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 SFL LLV Q++NQDPT PM+ + SQLA S V ++N+ L ++ I N+ QA Sbjct: 34 SFLKLLVTQMQNQDPTQPMDPTQYVSQLATFSNVEQSVQMNSKLETL---IANTSLTQAE 90 Query: 94 NLIGH 98 IG Sbjct: 91 GWIGR 95 >UniRef50_Q1IR52 Putative basal-body rod modification protein FlgD n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR52_ACIBL Length = 92 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 44/68 (64%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G +T +++S S DL ++F LLVAQLK+QDPT+PM+ ++L SQL ++T+ + + Sbjct: 9 GQATNAATSGPVSGMGDLDTTFAQLLVAQLKSQDPTSPMDPSQLVSQLVGLNTLDAVTSI 68 Query: 74 NTTLGSIS 81 L ++ Sbjct: 69 YQLLAGLA 76 >UniRef50_B1M7H2 Flagellar hook capping protein n=2 Tax=Rhizobiales RepID=B1M7H2_METRJ Length = 139 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%) Query: 35 FLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 FL LL+AQ+KNQ+PT+PM++ + +QLA S V +N+ L ++ + +S QA Sbjct: 37 FLKLLLAQMKNQNPTDPMKSTDYMAQLATFSQVEQSVNMNSKLDAL---LTSSTLSQAGG 93 Query: 95 LIGHGV 100 L+GH V Sbjct: 94 LVGHTV 99 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2Y9E5 Flagellar hook capping protein n=1 Tax=Nitrososp... 207 3e-52 UniRef50_A9IKQ3 Basal-body rod modification protein FlgD n=5 Tax... 197 2e-49 UniRef50_Q3SIE0 Flagellar basal-body rod modification protein Fl... 195 1e-48 UniRef50_C1DC22 Flagellar hook capping protein n=1 Tax=Laribacte... 191 1e-47 UniRef50_A4G6B2 Basal-body rod modification protein FlgD n=2 Tax... 190 3e-47 UniRef50_Q1QW30 Flagellar hook capping protein n=1 Tax=Chromohal... 189 4e-47 UniRef50_Q0AJ54 Flagellar hook capping protein n=2 Tax=Nitrosomo... 188 1e-46 UniRef50_D0MGC4 Flagellar hook capping protein n=1 Tax=Rhodother... 188 2e-46 UniRef50_Q3JX26 Basal-body rod modification protein FlgD n=56 Ta... 188 2e-46 UniRef50_Q1GZW4 Flagellar hook capping protein n=3 Tax=cellular ... 186 5e-46 UniRef50_C5CXV4 Flagellar hook capping protein n=1 Tax=Variovora... 186 7e-46 UniRef50_C4KAU5 Flagellar hook capping protein n=2 Tax=Rhodocycl... 183 3e-45 UniRef50_Q0AA88 Flagellar hook capping protein n=1 Tax=Alkalilim... 183 4e-45 UniRef50_B4EYN7 Basal-body rod modification protein n=3 Tax=Prot... 183 4e-45 UniRef50_C0GT27 Flagellar hook capping protein n=1 Tax=Desulfona... 181 1e-44 UniRef50_A6GSX8 Flagellar hook capping protein n=1 Tax=Limnobact... 181 2e-44 UniRef50_C6HWM8 Flagellar hook capping protein n=1 Tax=Leptospir... 181 2e-44 UniRef50_A1WUE3 Flagellar hook capping protein n=1 Tax=Halorhodo... 181 2e-44 UniRef50_Q46PG2 Flagellar hook capping protein n=4 Tax=Cupriavid... 181 2e-44 UniRef50_Q2SDU0 Flagellar hook capping protein n=4 Tax=Gammaprot... 179 7e-44 UniRef50_C6MIR9 Flagellar hook capping protein n=1 Tax=Nitrosomo... 179 8e-44 UniRef50_C6WVA8 Flagellar hook capping protein n=1 Tax=Methylote... 179 8e-44 UniRef50_Q3J8L2 Flagellar hook capping protein n=2 Tax=Nitrosoco... 179 9e-44 UniRef50_C6C0W1 Flagellar hook capping protein n=1 Tax=Desulfovi... 178 1e-43 UniRef50_B7UXB0 Flagellar basal-body rod modification protein Fl... 177 2e-43 UniRef50_P57421 Basal-body rod modification protein flgD n=4 Tax... 177 3e-43 UniRef50_C5V018 Flagellar hook capping protein n=1 Tax=Gallionel... 176 4e-43 UniRef50_Q5R0P5 Flagellar hook capping protein n=2 Tax=Idiomarin... 176 7e-43 UniRef50_C6P5G1 Flagellar hook capping protein n=1 Tax=Sideroxyd... 175 9e-43 UniRef50_C6BXM0 Flagellar hook capping protein n=1 Tax=Desulfovi... 175 1e-42 UniRef50_B4UFG0 Flagellar hook capping protein n=3 Tax=Anaeromyx... 174 1e-42 UniRef50_B8GQB0 Flagellar hook capping protein n=1 Tax=Thioalkal... 174 2e-42 UniRef50_B9ZPV2 Flagellar hook capping protein n=1 Tax=Thioalkal... 174 3e-42 UniRef50_Q6MHY7 Basal-body rod modification protein flgD n=1 Tax... 173 4e-42 UniRef50_D1NZK4 Basal-body rod modification protein FlgD n=3 Tax... 173 5e-42 UniRef50_C4XMS4 Flagellar basal-body rod modification protein Fl... 171 1e-41 UniRef50_A4BQE9 Flagellar basal body rod modification protein n=... 171 2e-41 UniRef50_B2PY25 Putative uncharacterized protein n=1 Tax=Provide... 169 5e-41 UniRef50_B4SIL9 Flagellar hook capping protein n=13 Tax=Xanthomo... 169 6e-41 UniRef50_Q5X5U4 Flagellar basal-body rod modification protein Fl... 169 8e-41 UniRef50_A7K5D2 Flagellar basal-body rod modification protein Fl... 168 1e-40 UniRef50_D1U8I5 Flagellar hook capping protein n=1 Tax=Desulfovi... 167 2e-40 UniRef50_Q1NVF9 Flagellar hook capping protein n=2 Tax=delta pro... 167 2e-40 UniRef50_C5SD64 Flagellar hook capping protein n=1 Tax=Allochrom... 167 3e-40 UniRef50_B7VKM1 Flagellar hook capping protein FlgD n=54 Tax=Vib... 167 3e-40 UniRef50_C8QYQ2 Flagellar hook capping protein n=1 Tax=Desulfuri... 166 4e-40 UniRef50_D2L1Z4 Flagellar hook capping protein n=1 Tax=Desulfovi... 166 4e-40 UniRef50_C7LRK4 Flagellar hook capping protein n=1 Tax=Desulfomi... 166 5e-40 UniRef50_A6LMJ0 Flagellar hook capping protein n=1 Tax=Thermosip... 164 2e-39 UniRef50_Q1MQV6 Flagellar hook capping protein n=1 Tax=Lawsonia ... 164 2e-39 UniRef50_Q21IK8 Flagellar hook capping protein n=4 Tax=Gammaprot... 164 2e-39 UniRef50_Q47I24 Flagellar hook capping protein n=2 Tax=Betaprote... 164 2e-39 UniRef50_B6AMC0 Probable flagellar hook capping protein FlgD n=2... 163 4e-39 UniRef50_B7IDJ4 Basal-body rod modification protein FlgD n=1 Tax... 163 5e-39 UniRef50_B8J086 Flagellar hook capping protein n=1 Tax=Desulfovi... 162 7e-39 UniRef50_Q39R05 Flagellar hook capping protein n=2 Tax=Geobacter... 162 7e-39 UniRef50_A6FHZ1 Flagellar basal body rod modification protein n=... 162 8e-39 UniRef50_Q6AJT4 Related to basal-body rod modification protein (... 162 1e-38 UniRef50_Q1JZT2 Flagellar hook capping protein n=1 Tax=Desulfuro... 162 1e-38 UniRef50_A1VDY6 Flagellar hook capping protein n=5 Tax=Desulfovi... 161 2e-38 UniRef50_C8WYV7 Flagellar hook capping protein n=1 Tax=Desulfoha... 161 2e-38 UniRef50_A8F889 Flagellar hook capping protein n=1 Tax=Thermotog... 160 3e-38 UniRef50_Q485P4 Basal-body rod modification protein FlgD n=1 Tax... 159 9e-38 UniRef50_D0L1M4 Flagellar hook capping protein n=1 Tax=Halothiob... 157 2e-37 UniRef50_Q3IDW5 Flagellar biosynthesis; initiation of hook assem... 157 2e-37 UniRef50_B9CZX6 Flagellar hook assembly protein n=2 Tax=Campylob... 157 3e-37 UniRef50_B2UJX2 Flagellar hook capping protein n=6 Tax=Ralstonia... 157 3e-37 UniRef50_A7HN98 Flagellar hook capping protein n=1 Tax=Fervidoba... 157 3e-37 UniRef50_Q1N303 Flagellar hook capping protein n=1 Tax=Bermanell... 156 6e-37 UniRef50_A4BEL4 Flagellar hook capping protein n=1 Tax=Reinekea ... 155 9e-37 UniRef50_Q1ZFB9 Flagellar basal body rod modification protein n=... 155 9e-37 UniRef50_A4SL11 Flagellar hook capping protein FlgD n=3 Tax=Aero... 155 1e-36 UniRef50_A8FXW6 Flagellar hook capping protein n=21 Tax=Shewanel... 155 1e-36 UniRef50_A9BEX8 Flagellar hook capping protein n=1 Tax=Petrotoga... 154 3e-36 UniRef50_A4U4K0 Basal-body rod modification protein flgD n=1 Tax... 152 7e-36 UniRef50_Q30UM0 Flagellar hook capping protein n=2 Tax=Campyloba... 152 7e-36 UniRef50_Q1YV96 Flagellar basal body rod modification protein n=... 152 8e-36 UniRef50_Q1K368 Flagellar hook capping protein n=1 Tax=Desulfuro... 152 8e-36 UniRef50_Q4K867 Basal-body rod modification protein FlgD n=15 Ta... 152 9e-36 UniRef50_Q0FMJ5 Flagellar hook capping protein n=1 Tax=Roseovari... 152 1e-35 UniRef50_A8TLX1 Flagellar hook capping protein n=1 Tax=alpha pro... 151 2e-35 UniRef50_Q2LSZ6 Flagellar hook capping protein n=1 Tax=Syntrophu... 151 2e-35 UniRef50_B8FK44 Flagellar hook capping protein n=1 Tax=Desulfati... 151 2e-35 UniRef50_B5EEN7 Flagellar hook capping protein n=5 Tax=Geobacter... 150 3e-35 UniRef50_B9Z358 Flagellar hook capping protein n=1 Tax=Lutiella ... 150 3e-35 UniRef50_Q15R84 Flagellar hook capping protein n=2 Tax=Alteromon... 149 6e-35 UniRef50_Q3A5C3 Flagellar hook initiation protein FlgD n=1 Tax=P... 149 7e-35 UniRef50_A0Z355 Flagellar hook capping protein n=3 Tax=unclassif... 149 8e-35 UniRef50_A6W1A4 Flagellar hook capping protein n=2 Tax=Marinomon... 149 8e-35 UniRef50_A5IJB4 Flagellar hook capping protein n=6 Tax=Thermotog... 149 1e-34 UniRef50_C6NWL0 Flagellar basal-body rod modification protein Fl... 149 1e-34 UniRef50_A3UFN5 Flagellar hook assembly protein FlgD n=1 Tax=Oce... 149 1e-34 UniRef50_Q2BQT9 Basal-body rod modification protein FlgD n=1 Tax... 148 1e-34 UniRef50_A4C6H0 Flagellar basal body rod modification protein n=... 148 1e-34 UniRef50_C4SBL2 Flagellar hook capping protein n=4 Tax=Enterobac... 148 1e-34 UniRef50_Q7NU17 Basal-body rod modification protein FlgD n=1 Tax... 147 2e-34 UniRef50_A7ZB54 Flagellar hook assembly protein n=1 Tax=Campylob... 146 5e-34 UniRef50_B8DS26 Flagellar hook capping protein n=1 Tax=Desulfovi... 146 9e-34 UniRef50_A1WFE4 Flagellar hook capping protein n=8 Tax=Comamonad... 145 9e-34 UniRef50_D1U365 Flagellar hook capping protein n=1 Tax=Desulfovi... 145 1e-33 UniRef50_A9DSD1 Flagellar hook capping protein n=1 Tax=Oceanibul... 144 2e-33 UniRef50_A5ESH7 Putative flagellar basal-body rod modification p... 143 4e-33 UniRef50_Q2RZC4 Basal-body rod modification protein FlgD n=1 Tax... 143 4e-33 UniRef50_A9BQ62 Flagellar hook capping protein n=4 Tax=cellular ... 143 5e-33 UniRef50_Q2LKA7 FlgDL n=1 Tax=Aeromonas hydrophila RepID=Q2LKA7_... 143 5e-33 UniRef50_D1B5D1 Flagellar hook capping protein n=1 Tax=Sulfurosp... 143 6e-33 UniRef50_A8FPA7 Flagellar hook capping protein n=8 Tax=Shewanell... 142 7e-33 UniRef50_Q0FVE9 Possible FlgD protein n=2 Tax=Rhodobacteraceae R... 142 1e-32 UniRef50_A7HV67 Flagellar hook capping protein n=1 Tax=Parvibacu... 142 1e-32 UniRef50_B6IQD6 Basal-body rod modification protein FlgD, putati... 141 1e-32 UniRef50_A6DYV3 Flagellar scaffolding protein FlgD n=1 Tax=Roseo... 141 1e-32 UniRef50_Q2RWZ4 Flagellar hook capping protein n=1 Tax=Rhodospir... 141 1e-32 UniRef50_B1XWJ6 Flagellar hook capping protein n=1 Tax=Leptothri... 141 2e-32 UniRef50_A1B2H8 Flagellar hook capping protein n=1 Tax=Paracoccu... 141 2e-32 UniRef50_C4TUA9 Basal-body rod modification protein n=1 Tax=Yers... 141 2e-32 UniRef50_B9L649 Flagellar hook capping protein n=2 Tax=Nautiliac... 141 2e-32 UniRef50_C7I103 Flagellar hook capping protein n=1 Tax=Thiomonas... 141 2e-32 UniRef50_Q4JMN7 Predicted flagellar hook capping protein n=1 Tax... 141 3e-32 UniRef50_A4XNR6 Flagellar hook capping protein n=1 Tax=Pseudomon... 141 3e-32 UniRef50_B9NLP1 Basal-body rod modification protein FlgD n=2 Tax... 141 3e-32 UniRef50_A4U361 Basal-body rod modification protein FlgD n=1 Tax... 140 3e-32 UniRef50_B4RG78 Flagellar hook assembly protein n=1 Tax=Phenylob... 140 3e-32 UniRef50_Q31FK9 Flagellar hook capping protein FlgD n=1 Tax=Thio... 140 3e-32 UniRef50_B4WBD2 Flagellar hook capping protein, putative n=2 Tax... 140 4e-32 UniRef50_A0RLY6 Flagellar hook assembly protein n=3 Tax=Campylob... 140 5e-32 UniRef50_Q2C8I4 Flagellar basal body rod modification protein n=... 139 6e-32 UniRef50_B3EBG4 Flagellar hook capping protein n=2 Tax=Desulfuro... 139 7e-32 UniRef50_A5V5R8 Flagellar hook capping protein n=1 Tax=Sphingomo... 139 1e-31 UniRef50_A6FKY3 Possible FlgD protein n=1 Tax=Roseobacter sp. Az... 138 1e-31 UniRef50_Q5LMU9 Basal-body rod modification protein FlgD n=1 Tax... 138 2e-31 UniRef50_A3U109 Related to basal-body rod modification protein (... 137 3e-31 UniRef50_A6F9Q1 LfgD n=1 Tax=Moritella sp. PE36 RepID=A6F9Q1_9GAMM 137 3e-31 UniRef50_B5JZB8 Basal-body rod modification protein FlgD n=2 Tax... 137 3e-31 UniRef50_B6AV37 Possible FlgD protein n=1 Tax=Rhodobacterales ba... 136 5e-31 UniRef50_C1SLD5 Flagellar hook capping protein n=1 Tax=Denitrovi... 136 5e-31 UniRef50_A3T090 Flagellar hook assembly protein FlgD n=2 Tax=Sul... 136 5e-31 UniRef50_A4WT49 Flagellar hook capping protein n=5 Tax=Rhodobact... 136 6e-31 UniRef50_B2K1Q4 Flagellar hook capping protein n=23 Tax=Yersinia... 136 8e-31 UniRef50_A3PFK9 Flagellar hook capping protein n=4 Tax=Rhodobact... 136 9e-31 UniRef50_A4EG00 Flagellar basal-body rod modification protein, p... 135 1e-30 UniRef50_A8LNK4 Flagellar hook capping protein FlgD n=1 Tax=Dino... 135 1e-30 UniRef50_C8RX78 Flagellar hook capping protein n=1 Tax=Rhodobact... 134 2e-30 UniRef50_Q8D3G1 FlgD protein n=1 Tax=Wigglesworthia glossinidia ... 134 2e-30 UniRef50_Q2NX18 Flagellar basal-body rod modification protein Fl... 134 3e-30 UniRef50_A7JZA8 Flagellar basal-body rod modification protein Fl... 134 3e-30 UniRef50_A0LDL3 Flagellar hook capping protein n=1 Tax=Magnetoco... 133 4e-30 UniRef50_Q0EZL7 Flagellar hook capping protein n=1 Tax=Mariprofu... 133 5e-30 UniRef50_B6QZA4 Flagellar hook capping protein n=1 Tax=Pseudovib... 133 5e-30 UniRef50_Q2CGF8 Flagellar hook assembly protein FlgD n=1 Tax=Oce... 133 5e-30 UniRef50_C4UZG9 Basal-body rod modification protein n=2 Tax=Ente... 132 7e-30 UniRef50_Q1GCA6 Flagellar basal-body rod modification protein Fl... 132 1e-29 UniRef50_A1VXC7 Flagellar hook assembly protein n=15 Tax=Campylo... 132 1e-29 UniRef50_Q0ARV5 Flagellar hook capping protein n=1 Tax=Maricauli... 131 2e-29 UniRef50_UPI0001826559 flagellar basal body rod modification pro... 131 2e-29 UniRef50_C5SMJ0 Flagellar hook capping protein n=2 Tax=Asticcaca... 131 3e-29 UniRef50_Q2WA16 Flagellar hook capping protein n=2 Tax=Magnetosp... 131 3e-29 UniRef50_A3K323 Possible FlgD protein n=1 Tax=Sagittula stellata... 129 5e-29 UniRef50_Q28JI8 Basal-body rod modification protein FlgD n=1 Tax... 129 9e-29 UniRef50_A1T0J4 Flagellar basal-body rod modification protein Fl... 128 1e-28 UniRef50_A2SKD5 Flagellar hook capping protein n=1 Tax=Methylibi... 128 2e-28 UniRef50_Q1NGN4 Flagellar scaffolding protein n=1 Tax=Sphingomon... 127 2e-28 UniRef50_Q16DP6 Flagellar basal-body rod modification protein, p... 127 2e-28 UniRef50_D0I441 Flagellar basal-body rod modification protein Fl... 127 2e-28 UniRef50_A0P3G8 Flagellar hook capping protein n=2 Tax=Labrenzia... 127 2e-28 UniRef50_C6BZU8 Flagellar hook capping protein n=1 Tax=Desulfovi... 127 3e-28 UniRef50_C6XM56 Flagellar hook capping protein n=1 Tax=Hirschia ... 126 6e-28 UniRef50_B0SWE2 Flagellar hook capping protein n=3 Tax=Caulobact... 126 6e-28 UniRef50_C0QPA6 Flagellar hook capping protein FlgD n=1 Tax=Pers... 125 1e-27 UniRef50_B0UIW9 Flagellar hook capping protein n=9 Tax=Alphaprot... 124 2e-27 UniRef50_Q2RRB2 Flagellar hook capping protein n=1 Tax=Rhodospir... 124 2e-27 UniRef50_B1K3C8 Flagellar hook capping protein n=2 Tax=Burkholde... 124 3e-27 UniRef50_C7BXG3 Flagellar hook assembly protein FlgD n=5 Tax=Hel... 122 1e-26 UniRef50_A3V1Q8 Possible FlgD protein n=1 Tax=Loktanella vestfol... 121 2e-26 UniRef50_A3V266 Flagellar scaffolding protein FlgD n=3 Tax=Rhodo... 121 2e-26 UniRef50_B6JMC9 Flagellar hook assembly protein n=13 Tax=Helicob... 121 2e-26 UniRef50_Q0C5K2 Putative basal-body rod modification protein Flg... 121 2e-26 UniRef50_A3VB77 Possible FlgD protein n=1 Tax=Rhodobacterales ba... 120 3e-26 UniRef50_B6IT44 Basal-body rod modification protein FlgD, putati... 120 4e-26 UniRef50_C8WBV8 Flagellar hook capping protein n=4 Tax=Zymomonas... 119 5e-26 UniRef50_A6Q2N2 Flagellar hook capping protein FlgD n=1 Tax=Nitr... 118 1e-25 UniRef50_A3SKB3 Possible FlgD protein n=1 Tax=Roseovarius nubinh... 118 2e-25 UniRef50_A5L6P4 Flagellar basal body rod modification protein D ... 117 4e-25 UniRef50_C1A556 Putative flagellar basal-body rod modification p... 114 3e-24 UniRef50_B3QDF7 Flagellar hook capping protein n=9 Tax=Bradyrhiz... 113 6e-24 UniRef50_A3W5K4 Possible FlgD protein n=2 Tax=Roseovarius RepID=... 111 2e-23 UniRef50_C5EXK1 Flagellar basal body rod modification protein n=... 109 1e-22 UniRef50_Q7M8B1 FLAGELLAR BIOSYNTHESIS PROTEIN n=1 Tax=Wolinella... 107 2e-22 UniRef50_A3VS68 Possible FlgD protein n=1 Tax=Parvularcula bermu... 107 4e-22 UniRef50_Q7NXC4 Basal-body rod modification protein FlgD n=1 Tax... 105 9e-22 UniRef50_A5FUQ9 Flagellar hook capping protein n=1 Tax=Acidiphil... 104 2e-21 UniRef50_P96970 FlgD (Fragment) n=1 Tax=Proteus mirabilis RepID=... 104 2e-21 UniRef50_B9Z4U7 Flagellar basal body rod modification protein n=... 103 6e-21 UniRef50_D2TJ83 Lateral flagellar rod protein n=2 Tax=Citrobacte... 100 3e-20 UniRef50_Q9KA39 Flagellar hook assembly protein n=2 Tax=Bacillus... 100 4e-20 UniRef50_UPI00016996F7 flagellar basal body rod modification pro... 100 5e-20 UniRef50_A8VS08 Succinyl-CoA synthetase, alpha subunit n=1 Tax=B... 99 1e-19 UniRef50_Q2NR91 Putative flagellar hook formation protein FlgD n... 98 3e-19 UniRef50_Q5WFR3 Flagellar basal-body rod modification protein Fl... 97 3e-19 UniRef50_D2LSH3 Flagellar hook capping protein n=1 Tax=Bacillus ... 97 3e-19 UniRef50_UPI0001695594 Flagellar hook capping protein n=1 Tax=Pa... 96 1e-18 UniRef50_A3IF23 Flagellar basal body rod modification protein D ... 95 2e-18 UniRef50_B1YI97 Flagellar hook capping protein n=1 Tax=Exiguobac... 93 5e-18 UniRef50_B0K1S4 Flagellar hook capping protein n=9 Tax=Thermoana... 92 1e-17 UniRef50_C1PG44 Flagellar hook capping protein n=1 Tax=Bacillus ... 92 2e-17 UniRef50_B8CYR3 Flagellar hook capping protein n=1 Tax=Halotherm... 91 4e-17 UniRef50_C4L629 Flagellar hook capping protein n=1 Tax=Exiguobac... 90 6e-17 UniRef50_A9HHB6 Flagellar hook capping protein n=2 Tax=Acetobact... 90 6e-17 UniRef50_A4J759 Flagellar hook capping protein n=1 Tax=Desulfoto... 90 6e-17 UniRef50_B2S3W7 Flagellar hook assembly scaffolding protein n=2 ... 89 1e-16 UniRef50_Q18CZ5 Putative basal-body rod modification protein n=5... 89 1e-16 UniRef50_C4V0N7 Possible flagellar basal body rod modification p... 89 1e-16 UniRef50_UPI0001BCF0E6 flagellar basal body rod modification pro... 89 1e-16 UniRef50_A4IMA1 Flagellar hook assembly protein n=5 Tax=Geobacil... 88 2e-16 UniRef50_B0THA9 Flagellar hook capping protein, putative n=1 Tax... 88 2e-16 UniRef50_Q8EQX6 Flagellar hook assembly protein n=1 Tax=Oceanoba... 88 2e-16 UniRef50_A1HN34 Flagellar hook capping protein n=1 Tax=Thermosin... 88 2e-16 UniRef50_A3DCN1 Flagellar hook capping protein n=3 Tax=Clostridi... 88 3e-16 UniRef50_C0GJH6 Flagellar hook capping protein n=1 Tax=Dethiobac... 88 3e-16 UniRef50_C5CYE7 Flagellar hook capping protein n=1 Tax=Variovora... 87 3e-16 UniRef50_Q0AYN0 Flagellar hook capping protein-like protein n=1 ... 87 3e-16 UniRef50_C6IVW2 Flagellar hook capping protein n=1 Tax=Paenibaci... 87 4e-16 UniRef50_B5YIG3 Flagellar hook capping protein n=1 Tax=Thermodes... 87 4e-16 UniRef50_C1TKJ1 Flagellar hook capping protein n=1 Tax=Dethiosul... 86 6e-16 UniRef50_D1C163 Flagellar hook capping protein n=1 Tax=Sphaeroba... 86 7e-16 UniRef50_Q3ADD8 Flagellar hook assembly protein n=1 Tax=Carboxyd... 86 9e-16 UniRef50_B8FTP2 Flagellar hook capping protein n=2 Tax=Desulfito... 86 9e-16 UniRef50_A8MHE3 Flagellar hook capping protein n=1 Tax=Alkaliphi... 86 1e-15 UniRef50_C0QVF9 Flagellar hook capping protein n=2 Tax=Brachyspi... 85 1e-15 UniRef50_UPI0001788768 flagellar hook capping protein n=1 Tax=Ge... 85 2e-15 UniRef50_B7XQJ3 Basal-body rod modification protein flgD n=1 Tax... 84 2e-15 UniRef50_B7J1L2 Flagellar hook capping protein n=21 Tax=Borrelia... 84 3e-15 UniRef50_P23455 FlaA locus uncharacterized protein ylxG n=5 Tax=... 84 3e-15 UniRef50_UPI0001C312A9 flagellar hook capping protein n=1 Tax=Co... 84 3e-15 UniRef50_C8W1G3 Flagellar hook capping protein n=1 Tax=Desulfoto... 84 4e-15 UniRef50_A4XIY2 Flagellar hook capping protein n=2 Tax=Clostridi... 84 4e-15 UniRef50_A7GGP7 Flagellar hook capping protein n=10 Tax=Clostrid... 84 5e-15 UniRef50_C4G362 Putative uncharacterized protein n=1 Tax=Abiotro... 84 5e-15 UniRef50_Q2RKE4 Flagellar hook capping protein n=1 Tax=Moorella ... 83 6e-15 UniRef50_A6TRQ2 Flagellar hook capping protein n=1 Tax=Alkaliphi... 83 7e-15 UniRef50_B7GGB3 Flagellar hook capping protein n=3 Tax=Bacillace... 82 1e-14 UniRef50_A1UTS5 Flagellar hook capping protein n=1 Tax=Bartonell... 82 2e-14 Sequences not found previously or not previously below threshold: UniRef50_D0Y261 Flagellar hook capping protein n=1 Tax=Caulobact... 109 1e-22 UniRef50_Q07ST8 Flagellar hook capping protein n=14 Tax=Bradyrhi... 106 7e-22 UniRef50_Q2CDG3 Possible FlgD protein n=1 Tax=Oceanicola granulo... 105 1e-21 UniRef50_B2V6Q5 Flagellar hook capping protein n=1 Tax=Sulfurihy... 101 2e-20 UniRef50_A3NFX4 Flagellar hook capping protein n=8 Tax=pseudomal... 100 5e-20 UniRef50_A6CQ95 Flagellar basal body rod modification protein D ... 97 6e-19 UniRef50_Q5DY16 Lateral flagellar rod protein (FlgD-like) n=8 Ta... 93 8e-18 UniRef50_C9LSP2 Flagellar hook capping protein n=1 Tax=Selenomon... 86 8e-16 UniRef50_A0Q029 Flagellar hook assembly protein FlgD n=3 Tax=Clo... 84 5e-15 >UniRef50_Q2Y9E5 Flagellar hook capping protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9E5_NITMU Length = 222 Score = 207 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 91/229 (39%), Positives = 135/229 (58%), Gaps = 8/229 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + T PT+ + + S DLQ FL LLV Q+KNQDP NP++N ++T+QLA Sbjct: 2 STIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQLA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 QISTV+G+E+LN T+ +I+ QSLQA+ +IG V++PG+ + G+ Sbjct: 62 QISTVNGVERLNATIRTIADSFTAGQSLQAAGMIGREVLVPGSALQLANGAAR------- 114 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 FG+EL Q AD+V I D G ++ +++G AG WDG +DGS A NG+Y+++ Sbjct: 115 -FGIELTQPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTSDGSQAANGNYSIS 173 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A G ++ Q L A+VQGV +GN G LD+G G L ++RQI Sbjct: 174 VAALRGDQKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF 222 >UniRef50_A9IKQ3 Basal-body rod modification protein FlgD n=5 Tax=Bordetella RepID=A9IKQ3_BORPD Length = 231 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 141/227 (62%), Gaps = 1/227 (0%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 T + T++ + S + ++A LQ FLTLLV QLKNQDP NPMEN ELTSQLAQIS Sbjct: 3 TVNNSTDSTGLALAQSGVGANSAQSLQDRFLTLLVTQLKNQDPLNPMENAELTSQLAQIS 62 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 TV GI L TL +ISGQID SQS+ A ++IG GV+IPG + GT + + + TPFG Sbjct: 63 TVEGITNLKNTLLAISGQIDVSQSMNAVSMIGKGVLIPGEKISLGTDASDPSKRVATPFG 122 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 ++LQ A KV+ I D +GAVVR+ ++GE GV + WDGT G +G Y V +SA Sbjct: 123 IDLQGDAAKVSVKILDASGAVVRSFELGEQDTGVLTLDWDGTNDGGQALVDGKYTVKVSA 182 Query: 186 SN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++ G ++ A+ L + V V G LDLG G ++ +VR+++ Sbjct: 183 TDADGKKVQAETLTYGKVNSVSYSTDGLRLDLGLAGQISMLDVRKVL 229 >UniRef50_Q3SIE0 Flagellar basal-body rod modification protein FlgD n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIE0_THIDA Length = 221 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 8/215 (3%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 ++ + S ++D Q FL+LLVAQ+KNQDP NP++N E+TSQ+AQ+STV GIE +N + Sbjct: 15 GAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMAQLSTVEGIENMNKS 74 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 L +++ + SQ QA+NLIGH V++PG V G G EL + ADKVT Sbjct: 75 LEALASSMGASQMSQAANLIGHAVLVPGNAV--------GPGQLENLMGFELTRPADKVT 126 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 I D G +VR++D+G AGV+ WDG G+ AP G+Y+ +SA GG + Sbjct: 127 LDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGSGAVAPAGAYSFKVSAVQGGQAQSSIA 186 Query: 197 LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 L LV V + + G L+L G+ ++R+I Sbjct: 187 LNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF 221 >UniRef50_C1DC22 Flagellar hook capping protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DC22_LARHH Length = 239 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 8/239 (3%) Query: 1 MSIAVTTTDPTNTGVST-TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M+ AV T T + +++ T S A ++Q FL LL+ QL+ QDP NP++N ++TS Sbjct: 1 MTTAVNPTSSTEDPFAGINGTNTKTKSEADEIQDRFLKLLITQLQTQDPLNPLDNYQMTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAG-------TG 112 Q+AQIS+V GIEKLN+++ +++ SQ+ A+ +IGH +I G+ +L Sbjct: 61 QMAQISSVQGIEKLNSSVSALTEAYAASQAFAAAGMIGHVSLIEGSHMLLTYAEGTEVDA 120 Query: 113 SEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGS 172 G+ L AD+VT + + +G +V ++ +G G+ F+WDG +DG Sbjct: 121 DGNKIKVPIAQGGISLPDGADEVTIKVYNSDGELVDSVTMGAQQPGISHFSWDGKGSDGE 180 Query: 173 TAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 P G Y+ ++ A GG A+PL FA + + N L L T + ++R+++ Sbjct: 181 PLPEGMYSFSVEAKKGGNTATAKPLGFARIDALTWENGSPKLILSTGQKISPSDIRELL 239 >UniRef50_A4G6B2 Basal-body rod modification protein FlgD n=2 Tax=Oxalobacteraceae RepID=A4G6B2_HERAR Length = 225 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 126/226 (55%), Gaps = 8/226 (3%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 TT P +S+ S A + Q FLTLLV Q+KNQDP NP++N ++TSQLAQ+S Sbjct: 8 TTVLPQALLDQMNGTSAAKKSTAEEAQDRFLTLLVTQMKNQDPLNPLDNAQVTSQLAQLS 67 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 TV+GI+KLN TL S+ G ++Q+LQA+N+IGHGV+ PG+ + G Sbjct: 68 TVTGIDKLNGTLESMMGSYQSNQALQAANMIGHGVLAPGSNISLTENK--------GLMG 119 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 VE Q D + D G V+ TID+G AG WDGTL DGS A +GSY + A Sbjct: 120 VEFPQDVDAAEILVKDAAGNVIHTIDLGAHPAGTVPLLWDGTLADGSKAEDGSYQFEVKA 179 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 S G + A LQF +V V G +++ G L ++RQI+ Sbjct: 180 SLAGKPVSANALQFGIVTTVSTSPGGVQINVPGLGALNLADIRQIL 225 >UniRef50_Q1QW30 Flagellar hook capping protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QW30_CHRSD Length = 235 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 104/230 (45%), Positives = 152/230 (66%), Gaps = 2/230 (0%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S + + + T ++ + + ++ DL + F+TLL+ QL+NQDPT PM+N+++T+QL Sbjct: 8 SNTLASINSTPNANASNETRTTGAESSEDLNNRFMTLLITQLQNQDPTKPMDNSDMTAQL 67 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQI+TVSGI++LN +LG I+ QID ++LQAS+LIG GVM+PG+TV G + G V Sbjct: 68 AQINTVSGIQELNDSLGDINEQIDAGKTLQASSLIGQGVMVPGSTVRVGETEDGGVV--A 125 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 TP G EL AD++ TIT+ +G VV + +GV SF W GT DG+ G+YNV Sbjct: 126 TPLGAELATGADELEITITNGSGEVVHRSVEENVPSGVQSFDWPGTGLDGNAVAEGAYNV 185 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A GG ++ PL +ALVQGV G++G TLDLGT + L++VRQI+ Sbjct: 186 EMTARVGGEEVSVTPLNYALVQGVTSGDNGPTLDLGTSDSVALEDVRQIL 235 >UniRef50_Q0AJ54 Flagellar hook capping protein n=2 Tax=Nitrosomonas RepID=Q0AJ54_NITEC Length = 223 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 117/217 (53%), Gaps = 8/217 (3%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 S S D+Q FL LLV Q++NQDP +PM+N E+TSQ+AQISTVSGI+KLN Sbjct: 15 TSNGGSIKTARKGDEDMQERFLKLLVTQMQNQDPLSPMDNAEVTSQMAQISTVSGIDKLN 74 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 +TL + D +S +A+N+IG V++PG + + G G EL + DK Sbjct: 75 STLEKLVSDSDARRSFEAANMIGRSVLVPGADMQLENHTGIG--------GFELTEPVDK 126 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 + TI D G VR ID+G AGV +F WDG +G+ A G Y+ A+ A ++ A Sbjct: 127 LVVTIKDSAGIAVRDIDLGTQPAGVGTFAWDGLANNGNEAAGGQYSFALKAVRSNQEVAA 186 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 L F V G G L++G G + ++++I Sbjct: 187 STLAFGSVSSAQAGKEGALLEVGRLGYVGMHDIKKIF 223 >UniRef50_D0MGC4 Flagellar hook capping protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGC4_RHOM4 Length = 230 Score = 188 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 13/233 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M + D ++ S+ + + +FL LLV QL+ QDP NP+++ E +Q Sbjct: 1 MPSLIAPIDEIRQQALQSTPSAPAPPSQELDKEAFLRLLVTQLRYQDPINPLDSREFAAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQS----LQASNLIGHGVMIPGTTVLAGTGSEEG 116 LAQ STV + +N TL + S A+ L+G + G + G Sbjct: 61 LAQFSTVEQLIGINETLAAQSDAYAALAQGIHNSVAAGLVGKVIEAEGDRLTWGG----- 115 Query: 117 AVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN 176 PF +EL AA +V+ I ++ G VVRTI +G AG H+ WDG G P Sbjct: 116 --EDPVPFRIELGDAAQQVSIQIRNEAGEVVRTIFLGSKAAGEHAVEWDGKNDAGEALPA 173 Query: 177 GSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 G+Y + + A++ G + A+ V V G G L +G + + VR Sbjct: 174 GTYTIEVLATDADGDPVAARSFVRGRVTRVTFGPEGILLWIGDR-SVPMQSVR 225 >UniRef50_Q3JX26 Basal-body rod modification protein FlgD n=56 Tax=Burkholderia RepID=Q3JX26_BURP1 Length = 459 Score = 188 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 92/232 (39%), Positives = 135/232 (58%), Gaps = 11/232 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + T N+G++ +SSL+ ++AADLQ++FL LLV QL+NQDPT+P++++++TSQL Sbjct: 220 TAGTNGTSGANSGINV--ASSLSTTSAADLQTTFLKLLVTQLQNQDPTSPVDSSQMTSQL 277 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQI+TVSGI +LNT L S+S Q+ Q QA+ LIG V+ PG TV +G Sbjct: 278 AQINTVSGIAQLNTALTSLSSQLTAGQQTQAAMLIGSNVLAPGNTVPVKSG-------AA 330 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 +PFGV+L A +T T+ + +G VV TI+ G +AG F W T T G+ P+G+Y + Sbjct: 331 SPFGVQLTSAVSNLTITVKNASGVVVNTINAGAQSAGTVPFNWTPTDTAGNKLPDGTYTI 390 Query: 182 AISASN-GGTQLVAQPLQFALVQGVI-RGNSGNTLDLGTYGTTTLDEVRQII 231 + S ++ G Q L A V VI + + L L T +V I Sbjct: 391 SASYTDTSGKQYAPTTLSSAQVLSVIKQADGTPGLVLSNGSTVGFSQVASIF 442 >UniRef50_Q1GZW4 Flagellar hook capping protein n=3 Tax=cellular organisms RepID=Q1GZW4_METFK Length = 228 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 19 SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLG 78 S ++ S ++ Q F+ LL+AQ+KNQDP NPM+N E+TSQ+AQ+STV+GIEK+N +L Sbjct: 18 SGANNNTSAISETQDRFMKLLIAQMKNQDPLNPMDNAEVTSQMAQLSTVTGIEKMNASLS 77 Query: 79 SISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT 138 + + +Q+LQAS+LIG+ V++ G + EG + GVEL ADK+T Sbjct: 78 TFISSMQATQALQASSLIGNTVLVEGNSTYLAPAETEGE--SAAYLGVELPIGADKLTVN 135 Query: 139 ITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ 198 I + G VV+TI + AG+ S W+G DG+ P+G Y + +A+ G + + + PL Sbjct: 136 IKNGAGNVVKTITVTNQPAGISSLGWNGYGDDGTKLPDGRYTIEATATTGNSSVASTPLS 195 Query: 199 FALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + V V G+ G L+L T D+++QI Sbjct: 196 YEQVMSVSTGSDGVKLNLSNLAAITTDQIKQIF 228 >UniRef50_C5CXV4 Flagellar hook capping protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXV4_VARPS Length = 228 Score = 186 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 98/229 (42%), Positives = 140/229 (61%), Gaps = 1/229 (0%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A++ T + + T++SS + AD + FL LLV QL NQDP NPMEN ELTSQLA Sbjct: 1 MAISDTSSISGLNAATAASSAGNVSGADSEQRFLKLLVTQLNNQDPLNPMENAELTSQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+STVSGIE+LNT L + Q +Q LQA++LIG+ V+ PG + + G Sbjct: 61 QMSTVSGIERLNTALSGLVNQTGANQVLQAASLIGYNVLSPGNALSTSE-PKAGEAPAAV 119 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 PF V+L A V I + G VRT+ +G +T GV++ +WDG DGSTAP G+Y+ + Sbjct: 120 PFAVQLPATAGTVEVKIVNAAGNTVRTLTLGPMTEGVNAVSWDGKADDGSTAPAGAYSFS 179 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A+N GT++ A L F+ V V +G SG TL+L + + L +VR + Sbjct: 180 VAAANNGTRVEATSLVFSQVAAVKQGASGVTLELMSGQSIGLADVRMFL 228 >UniRef50_C4KAU5 Flagellar hook capping protein n=2 Tax=Rhodocyclaceae RepID=C4KAU5_THASP Length = 224 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 121/214 (56%), Gaps = 8/214 (3%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + S + D+ S FLTLL QLKNQDP NPMEN E+TSQLAQ+STV GIE+LN Sbjct: 19 NTREESKASASGDMNSRFLTLLTTQLKNQDPLNPMENAEVTSQLAQMSTVDGIERLNKMF 78 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 S S+QA+ L+G GV++ G + G G EL AAD V Sbjct: 79 QSFVDGQSAYDSMQAAALVGRGVLVEGKKLTLTEAGAVG--------GFELDAAADSVVL 130 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 +I D G ++ I++ ++ AG +F WDGT +DGS A +G+Y V +SA G ++ + L Sbjct: 131 SIKDAAGLEIKKIELADVKAGSQNFIWDGTASDGSRAVDGAYTVELSALAEGKKVTGRTL 190 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +F V VIRG SG +G+ G D+++QI+ Sbjct: 191 EFGPVTSVIRGASGTDFQVGSLGIFKYDDIKQIL 224 >UniRef50_Q0AA88 Flagellar hook capping protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AA88_ALHEH Length = 222 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 10/223 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 +G + + + Q FL L++ QL+NQDP NPME+ E SQ+A +T SG+ Sbjct: 6 AGSGDYSRAQPTQREPAGELGQDDFLKLMITQLQNQDPMNPMESGEFMSQIASFTTASGM 65 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 ++L + + +Q+LQA++L+G V++ AG +G +T V+L Sbjct: 66 DQLQKSFSEFQQDMRANQALQAASLVGREVLVETD---AGRLPADGEMTGI----VQLPS 118 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT 190 A I + G VRT+ GE +G + F WDG DG T P G+Y V S G Sbjct: 119 AVANANIHIHNAAGERVRTLATGEQPSGDYRFAWDGRADDGRTLPPGAYRVTASTQVEGE 178 Query: 191 QLVAQPLQFALVQGVIRGNS---GNTLDLGTYGTTTLDEVRQI 230 + + + A V V G ++L G L ++R++ Sbjct: 179 ERSLRVMNSAPVVSVTLAGENERGPRVNLDGIGEMALSDIRRV 221 >UniRef50_B4EYN7 Basal-body rod modification protein n=3 Tax=Proteus RepID=B4EYN7_PROMH Length = 264 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 139/264 (52%), Gaps = 33/264 (12%) Query: 1 MSIAVTTTDPTNTGVSTTSSSS--LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 M I+ + +PT+ + + SS + D++ +FLTLL+ Q++NQDPTNPM+NNELT Sbjct: 1 MGISASMNEPTDNTIIGEAPSSYHTKKGGSDDIKGNFLTLLITQMQNQDPTNPMQNNELT 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVL---------- 108 SQLAQISTV GIE LN T+ +I GQID SQ+L+A++L+ H VMI G + Sbjct: 61 SQLAQISTVEGIETLNKTVNTIVGQIDQSQALRATSLVNHMVMIAGNEISVDKINNGENA 120 Query: 109 --------------------AGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 A T + + ++ FG E D +T ITD +GA VR Sbjct: 121 GSDTDIDTDTTPDTQLDKLPASTDATDNENIFSSAFGFESFSPIDTLTVNITDSSGAKVR 180 Query: 149 TIDIGEL-TAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIR 207 TI++ V+ F WD T DG+ P G Y ++A+ Q+ + L+ A+V V Sbjct: 181 TIEMNSKILPDVYHFFWDCTDDDGNKVPTGKYQFTVNATFNDAQVPVKTLKSAVVNSVSM 240 Query: 208 GNSGNTLDLGTYGTTTLDEVRQII 231 LD+G +LDE+R++ Sbjct: 241 KEGKPHLDVGLGVIVSLDEIRKVF 264 >UniRef50_C0GT27 Flagellar hook capping protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT27_9DELT Length = 241 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 8/205 (3%) Query: 28 AADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNS 87 A + FL LL+ QL+NQDP +PM++ E +QLAQ S++ + ++ + S++ Sbjct: 29 AELGKMDFLKLLITQLENQDPLDPMDDKEFVAQLAQFSSLEQLTNISEGMESMNENQARQ 88 Query: 88 QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 + L A IG + G + + + L+ A + I D+NG +V Sbjct: 89 EMLGAVGFIGKEIRADGDGISKDG-------SGASKIFYNLEDTAQNLYFNIYDENGNMV 141 Query: 148 RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVI 206 RT++ +G + F WDG DG+ AP+G+Y+V+ISA G ++ V GV Sbjct: 142 RTVEKSARQSGDYEFEWDGLNFDGAEAPDGNYSVSISAEGPNGEPVMVNTEMTGRVSGVQ 201 Query: 207 RGNSGNTLDLGTYGTTTLDEVRQII 231 + L L +V +++ Sbjct: 202 DKDGQPHLRLSDGRMLRFADVSEVV 226 >UniRef50_A6GSX8 Flagellar hook capping protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX8_9BURK Length = 223 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 10/232 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+I VT+ N+G +T + ++ +Q F++LLVAQLKNQDP PM+N ++TSQ Sbjct: 1 MTIDVTSALGNNSG-TTAAKKKTDENSPEAIQERFMSLLVAQLKNQDPLAPMDNAQVTSQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ++TV+GI LN T+ ++ I+ +Q++QA++++G V+ G + G G Sbjct: 60 MAQLNTVTGINTLNATMEGVAASINANQTVQATSMLGRAVLTEGNDLKLVDGKAVG---- 115 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +EL Q+AD + + D VVRTI++G + G H F WDG DGST P G+Y Sbjct: 116 ----SMELNQSADILRVNVLDAGANVVRTIELGPQSKGTHEFEWDGKSNDGSTLPAGNYK 171 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQII 231 I A G PL ++VQGV G G L T +++Q+ Sbjct: 172 FEIEAKAAGKDASVTPLTLSVVQGVRNAGAEGTKLLTSNGSEITFADIKQVF 223 >UniRef50_C6HWM8 Flagellar hook capping protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM8_9BACT Length = 278 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 9/214 (4%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + S+ ++ +++ QL+ QDP +PM+N + SQLAQ S + + +N + Sbjct: 22 SPSALPPPQKKKLGMEDYMNIMIRQLQYQDPFHPMDNRKFASQLAQFSQLDQLVHMNKKM 81 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ Q + +LQ +G V + G + G E V L + A T Sbjct: 82 EGMANQGRETDALQMVGFLGREVFLKGNRFIKGEHQEATLV-------FHLDRPAHNATV 134 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT-QLVAQP 196 + +VR+ +G + AG WDG GS AP G Y + A + + A P Sbjct: 135 YVYGAKHQLVRSFKVGPMDAGDQHVAWDGLSNKGSKAPAGGYEFEVVARDAKNRPVPASP 194 Query: 197 LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L+ +V GV+ + L++ L ++ + Sbjct: 195 LRTGVVTGVVFSGTKPLLEV-NGERVDLGQITHV 227 >UniRef50_A1WUE3 Flagellar hook capping protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUE3_HALHL Length = 293 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 9/231 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S A + + + + G + FL L++ QL+NQDPT+P + ++ Q+ Sbjct: 69 SAAKSGYEALPEDLRSIPEDKDEGDPQSIGHEDFLELMMVQLQNQDPTDPQDTEQMMGQI 128 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ +T SGIE+L + + + QSL+AS L+G V+ E A+ Sbjct: 129 AQFTTASGIEQLQSDFREFFEHMRSDQSLRASQLVGREVVTESRQAYLPEDGEMEAL--- 185 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 ++L+++A +T I + G V +GE+ G H F WDGT DG P G+Y V Sbjct: 186 ----LQLERSAPNLTVEIENAAGERVHREQLGEMEEGEHPFAWDGTNNDGQRLPQGTYQV 241 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 +G + L A V V G G L + G +L +V++I Sbjct: 242 NAYVEDGDEREPVPTLVGAPVTSVSVGMDGRPPELSVAGLGEMSLSDVKRI 292 >UniRef50_Q46PG2 Flagellar hook capping protein n=4 Tax=Cupriavidus RepID=Q46PG2_RALEJ Length = 226 Score = 181 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 ++ ++AADLQS+FL +LV Q+ NQDP NPM+N +LTSQLAQISTVS ++ +N+TL Sbjct: 20 NAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLTSQLAQISTVSSMQTMNSTL 79 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 + Q S+++ ++ LIG VM+PG+ G FGV+L AD VT Sbjct: 80 TQLLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVAG-------QFGVDLPSTADAVTV 132 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 + D +G VVRTID+ TAGVH WDG G +G Y+ +SA+ GT + L Sbjct: 133 NVLDAHGNVVRTIDMKGQTAGVHDIAWDGKNDAGVAVADGDYSFKVSATANGTSVQPVAL 192 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + V + +SG +D+G +D+VR+I+ Sbjct: 193 VYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL 226 >UniRef50_Q2SDU0 Flagellar hook capping protein n=4 Tax=Gammaproteobacteria RepID=Q2SDU0_HAHCH Length = 225 Score = 179 bits (454), Expect = 7e-44, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 9/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + T + T+ +S + + + +L ++ F+ L++AQL NQ P +P +N +QL Sbjct: 2 SDINTANQTSDALSQYALQQKSANRKNELGKNEFMDLMIAQLNNQSPLDPQDNTAFVAQL 61 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ S+V GI+ LN+T+ +++ Q ++Q+LQAS ++G V+ P + + V Sbjct: 62 AQFSSVEGIQSLNSTVDTMASQFRSAQALQASAMVGRDVLAPMESAIKSADGSINGV--- 118 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 VEL ++T ++ ++ G ++ ID G G F+WDG ++G T P G Y V Sbjct: 119 ----VELPAGTSQLTISVYNEAGELITNIDKGYQPGGDVKFSWDGKNSNGETLPAGRYEV 174 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRG-NSGNTLDLGTYGTTTLDEVRQI 230 A G Q+ A V V + G TL+L G+ L +++QI Sbjct: 175 VARARYSGEQMQVSSYLAANVDSVSIARDGGVTLNLAGLGSVGLSDIKQI 224 >UniRef50_C6MIR9 Flagellar hook capping protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIR9_9PROT Length = 222 Score = 179 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 9/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + + T++ T +A + Q FL LL+ Q+KNQDP P++N E+TSQLA Sbjct: 1 MTSVQAADSQSISAGTTAGIKTKKDAENPQDRFLKLLITQMKNQDPLKPLDNAEVTSQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 QISTV+GI+KLN+TL + D+ +S++A +IGH +PG ++ Sbjct: 61 QISTVTGIDKLNSTLQQLVSSADDGRSIEALEMIGHSAYVPGKSITLEGEGAIA------ 114 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 G+EL Q+ DK T TI D +G +R +++G AGV + WDG G+ A G Y Sbjct: 115 --GIELAQSVDKATVTILDSSGIAIRKMELGVQPAGVSTIAWDGMTDSGTQAAPGDYTFE 172 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLG-TYGTTTLDEVRQII 231 ++A G + L F V V G G LD+G G +L +V+Q+ Sbjct: 173 VTAKQGDKDVKVNTLSFGTVNSVSHGELGTFLDMGKVLGLVSLSDVKQVF 222 >UniRef50_C6WVA8 Flagellar hook capping protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVA8_METML Length = 224 Score = 179 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 92/232 (39%), Positives = 126/232 (54%), Gaps = 13/232 (5%) Query: 5 VTTTDPTNTGVST-----TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 +TT + TNT T + T ++ Q F+ LLV Q++NQDP NPM+N ++TS Sbjct: 1 MTTVNTTNTASQTLLDAVNGKKNTTTTSVDAAQDRFMKLLVTQMRNQDPLNPMDNAQVTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQ+STV+GI+KLN TL ++ + QS QASN+IG ++ PG TV Sbjct: 61 QMAQLSTVTGIDKLNNTLETLINNVQMGQSYQASNMIGRNILTPGNTVETAG-------- 112 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 FGVEL ADKV +I D GAV+RTID+G+ G TWDG DG+ A GSY Sbjct: 113 EGGYFGVELPIGADKVKVSIKDSAGAVIRTIDLGKQDTGTLPLTWDGLKDDGTAAATGSY 172 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +SA+ G A L FA V + ++G L+L T V++I Sbjct: 173 KFEVSATIGTNTAEANALSFAKVLSISNYSTGVKLNLSNLMTVDTSAVKEIF 224 >UniRef50_Q3J8L2 Flagellar hook capping protein n=2 Tax=Nitrosococcus oceani RepID=Q3J8L2_NITOC Length = 226 Score = 179 bits (453), Expect = 9e-44, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 9/210 (4%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 N FL L+ AQL NQDP PM+N+ SQ+AQ TV GI+ L + +SG Sbjct: 24 KAQNTELGLEQFLKLMTAQLSNQDPFEPMDNSTFLSQVAQFGTVKGIQDLQASFQEVSGS 83 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 + ++Q+LQAS L+G V++P G + VEL I D+ Sbjct: 84 LQSNQALQASGLVGRSVLVPSAESSLEAG-------GSIRGAVELPSGVASPQLKIFDQA 136 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQ 203 G +VRT+D+G G FTWDG DG+ A G Y + G V Sbjct: 137 GQLVRTVDLGADQTGTVQFTWDGFKEDGTPATPGRYQFKVEGVTEGGAQGFPTFAAVRVD 196 Query: 204 GVIRGNS--GNTLDLGTYGTTTLDEVRQII 231 V+ G G TL+L G+ +++QI+ Sbjct: 197 SVVIGEGSEGLTLNLAGQGSVPFSQIKQIL 226 >UniRef50_C6C0W1 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0W1_DESAD Length = 242 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 8/219 (3%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 + ++S+ Q FL LL+ Q++NQDP NPME+ E +Q+AQ S++ + ++ Sbjct: 13 AEADMAASNQPKHKNQLGQDDFLKLLLTQMQNQDPANPMEDKEYMAQMAQFSSLEQLTQV 72 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 N+ + ++ Q + A IG V G ++ G + L + Sbjct: 73 NSNIKTMIDNNAQDQMVSAVGFIGKEVKAEGYSISRDNGK-------ISKVFYGLGEPVA 125 Query: 134 KVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQL 192 I D N +VRT+ +G G F WDG G P+G Y +A++A + G+ + Sbjct: 126 NAFINIYDNNKNLVRTVQLGSKAEGTFEFEWDGKNWAGKDVPDGVYTIAMAAEDAEGSPV 185 Query: 193 VAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + + V GV+ L L +R+++ Sbjct: 186 MVKTEVSGEVSGVVSEGGQQYLHLKDGRYINFLNIREVV 224 >UniRef50_B7UXB0 Flagellar basal-body rod modification protein FlgD n=6 Tax=Pseudomonas aeruginosa RepID=B7UXB0_PSEA8 Length = 237 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 9/220 (4%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 G T + ++ + FL LLVAQLKNQDP +P +N E +QLAQ STV G++ Sbjct: 23 AGSGATETGQSVKGSSNLGKDEFLKLLVAQLKNQDPMSPQQNGEFIAQLAQFSTVEGVQS 82 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 LN ++ SI +SQ+LQAS+L+G V++ + T T + L ++ Sbjct: 83 LNKSMESILSNYQSSQALQASSLVGRKVIVATDKSVVDT-------KDTFKASLNLPVSS 135 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL 192 V + D G VV I++G+ AG SF WDG + G+ P G+Y S G Sbjct: 136 SNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTSIDGKTY 195 Query: 193 VAQPLQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 Q A V V G +G L+L G+ L +V+ I Sbjct: 196 GLQTYLPANVDSVTLGQNGGELMLNLAGLGSIALSKVQII 235 >UniRef50_P57421 Basal-body rod modification protein flgD n=4 Tax=Buchnera aphidicola RepID=FLGD_BUCAI Length = 236 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 7/221 (3%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 N V ++ N DLQ +FL+LL+AQ+KNQDPT+P++N++LTSQLAQI+T SG+ Sbjct: 22 NNEAVKKNDNNLPNDINPPDLQKNFLSLLIAQIKNQDPTDPIKNSDLTSQLAQINTASGM 81 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 +KLN T+ S QI +Q++Q S LIG VM+P ++ ++ T FG+EL + Sbjct: 82 QKLNNTVDQFSNQISKNQNIQLSTLIGRHVMVPNKKIIHTKDTK-------TQFGIELFE 134 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT 190 A V ITD N + + E AG H+F WDG + ++ +G YN+++ A Sbjct: 135 KATSVEIKITDDNNKTLYLKQLKETEAGRHNFFWDGQDLNKNSVMSGQYNISVIAKKNNQ 194 Query: 191 QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + L +V +I + +DLG G T +R+I+ Sbjct: 195 NIPVNSLSVGVVNSIIMSSGNAIIDLGESGQITPLSIREIL 235 >UniRef50_C5V018 Flagellar hook capping protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V018_9PROT Length = 188 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 119/196 (60%), Gaps = 8/196 (4%) Query: 36 LTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNL 95 + LLV QLKNQDP NPM+N ++TSQ+AQISTVSGI+KLN TL ++S + +Q+LQA+ + Sbjct: 1 MKLLVTQLKNQDPLNPMDNAQMTSQMAQISTVSGIDKLNATLQALSASMTPNQTLQAATM 60 Query: 96 IGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGEL 155 IG GV++ G + G G G EL AA+ ++TD +G ++ TID+G Sbjct: 61 IGRGVLVTGNGMDLKAGVGLG--------GFELASAAESNKVSVTDASGVLISTIDLGAQ 112 Query: 156 TAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLD 215 AG+ F WDG + G+ P+G Y A++++ + A L++ +V V +G+ G L Sbjct: 113 PAGIVKFQWDGKDSAGNVMPDGQYTFAVTSTQASNTVAATGLEYGIVGSVTQGSQGVELS 172 Query: 216 LGTYGTTTLDEVRQII 231 +G L +V+QI+ Sbjct: 173 VGQMQKVALAQVKQIL 188 >UniRef50_Q5R0P5 Flagellar hook capping protein n=2 Tax=Idiomarina RepID=Q5R0P5_IDILO Length = 227 Score = 176 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 8/210 (3%) Query: 22 SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 + + Q F LL QL QDP+ P+EN+++ +Q+ + GI L+ + Sbjct: 24 ADPDERSKLEQEDFFRLLTEQLSMQDPSKPVENDQMIAQMTNFTMAEGITGLSERFDQFA 83 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 + ++Q+LQAS ++G V++P TG+ + T Q+A V I D Sbjct: 84 SDMTSNQALQASTMVGRKVLVPTDQANLETGAGVTGMIAT-------PQSAQNVKINIKD 136 Query: 142 KNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFAL 201 GA V+TI+IG++ G F WDG + +G AP G+Y+ +++A GG A Sbjct: 137 STGATVKTIEIGDMPQGTKEFEWDGKMANGDEAPAGNYSFSVNAQVGGKTEELPIQMHAR 196 Query: 202 VQGVIRGNS-GNTLDLGTYGTTTLDEVRQI 230 VQ V G G L+L G L +V +I Sbjct: 197 VQSVSTGGDRGVVLNLKGLGGIKLSDVTEI 226 >UniRef50_C6P5G1 Flagellar hook capping protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5G1_9PROT Length = 220 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 9/228 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT ++T + ++++ T S Q FLTLLV QLKNQDP NPM+N ++TSQ+AQ+ Sbjct: 1 MTTPVQSSTSAAAAAATAATSSQLGATQDRFLTLLVTQLKNQDPLNPMDNAQVTSQMAQL 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 STVSGI +LN+T+ ++S + SQSLQA+++IGH ++PG + G + A Sbjct: 61 STVSGINQLNSTVQALSASMATSQSLQATSMIGHAALVPGAQIDLLKGQSDAA------- 113 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELT-AGVHSFTWDGTLTDGSTAPNGSYNVAI 183 VEL Q AD VT TITD G VVRT+ +G+ + AGV +F WDG G+T +GSY + Sbjct: 114 -VELAQPADNVTVTITDAKGNVVRTLPLGQQSAAGVVNFQWDGKDNTGATVADGSYKFSA 172 Query: 184 SASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +A GGT L + LV V + G TL +GT G L VRQ++ Sbjct: 173 NAVLGGTNSSPTTLSYGLVNNVSLTSGGVTLGMGTLGNVGLSAVRQVL 220 >UniRef50_C6BXM0 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM0_DESAD Length = 220 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 8/224 (3%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 D T S +++ + + +FL L V QLKNQDP NPM+N E +QLAQ STV Sbjct: 3 DTTAYLNSVNKNATPKTPSKDLNKDAFLKLFVTQLKNQDPVNPMDNKEQLAQLAQFSTVE 62 Query: 69 GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 + ++ + ++ ++ L A+ IG VM G V A + L Sbjct: 63 RLTNISKAMDGLTKTVNAMMGLNATGYIGKTVMAKGFGVSKKGSDISSA-------NISL 115 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA-SN 187 A V I DK+G ++R++++G AG F WDG +G+ A +G YN+AI A ++ Sbjct: 116 PAACKTVYVDIYDKDGGLIRSVELGSKDAGKFDFKWDGKDKNGNDAEDGQYNIAIRAETS 175 Query: 188 GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 G +++A ++ V N L+L L V +++ Sbjct: 176 KGKKVLATTEVSGKIKAVNMAGGQNVLELEDGRKVLLSNVTRVV 219 >UniRef50_B4UFG0 Flagellar hook capping protein n=3 Tax=Anaeromyxobacter RepID=B4UFG0_ANASK Length = 225 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 9/226 (3%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 T+ + G + + +++A + +FL LL QL++QDP +PM++ +QLAQ S Sbjct: 3 TSPVTSALGALPQAGQAPAPASSALGKDAFLKLLTTQLQHQDPLSPMDSQAFVAQLAQFS 62 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 +V + L L +++ +S L + L+G V+ V G F Sbjct: 63 SVEQLGALGDKLDTLAMAQASSNQLGTAALVGKEVLFRADRVRLDPG-------GPARFE 115 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 V L A + A + D +G VVRT+ +G AG +WDG G P G Y + +SA Sbjct: 116 VTLPAEAGEAVAILADASGRVVRTLQLGARDAGTFQVSWDGRDASGEPLPAGDYLLTVSA 175 Query: 186 SN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + GT L A V GV N L +G L +V Q+ Sbjct: 176 TRTDGTALDAATSLRGTVTGVTFENQAPELLVGGR-HVKLSDVLQL 220 >UniRef50_B8GQB0 Flagellar hook capping protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQB0_THISH Length = 226 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 10/216 (4%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 T+ ++ T + QS FL L++ QL+NQDP PME+ E QLAQ TVSGIE L + Sbjct: 18 TSHETANTKGDDRLGQSDFLRLMITQLENQDPFKPMESGEFLGQLAQFGTVSGIEDLQKS 77 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 S I + Q+LQA+ L+ V +PG ++ V++ +A+ V Sbjct: 78 FNRFSQSIASGQALQAAALVDRHVTVPGDMIIMDPAE-------GMRGAVQVPASAE-VV 129 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 + ++ G +VR I +G AG+ F WDG G+ G Y A AS+G Sbjct: 130 IGVYNQAGQLVRRIPMGIQEAGLREFHWDGRDETGTLLAPGIYEFAGLASDGRGTEALDM 189 Query: 197 LQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 A V+ V GN+ L + G ++VRQI Sbjct: 190 HLSARVESVSLGNNNGALLLQVEGMGEVNFNKVRQI 225 >UniRef50_B9ZPV2 Flagellar hook capping protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPV2_9GAMM Length = 223 Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 G QS FL L+ QL+NQDP PMEN E Q+AQ STV+GIE+L+ + ++ + Sbjct: 22 GPADRLGQSDFLKLMTTQLQNQDPFEPMENGEFIGQMAQFSTVTGIEELSKSFEKLAQSM 81 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 SQ+LQA++L+G V++P GT VEL Q+ ++ + G Sbjct: 82 GQSQTLQAASLVGKDVLVPTDFSELGTD-------GMVRGAVELDQSTGQLQVEVYSPTG 134 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQG 204 +R++++G + G+ FTWDG DG+ A G Y SA +G + A V+ Sbjct: 135 ERIRSMNLGSASEGLQEFTWDGMRDDGTPAAPGVYEFRASAQSGSSSESVDVFLDARVES 194 Query: 205 VIRGNSGNT-LDLGTYGTTTLDEVRQI 230 V G+ + L + G +VR+I Sbjct: 195 VSVGDDSSLGLMVRGLGEINFSDVRRI 221 >UniRef50_Q6MHY7 Basal-body rod modification protein flgD n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHY7_BDEBA Length = 334 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 8/216 (3%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + S N + + +F L++ Q+KNQDPTNP++++E+ +QLA S++ ++ +N Sbjct: 54 TDPSKKVRAVGNPSLDKDAFFKLMLTQMKNQDPTNPLKSHEMAAQLASFSSLEQMQNMNK 113 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 +L + S++ QA NLIG V + V+ GT E F L AA +V Sbjct: 114 SLDEMKNGQKPSENFQALNLIGKAVAGDSSKVVRGTNDREH------DFKFTLPMAASEV 167 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA-SNGGTQLVA 194 + + D G VVRT ++ L AG + TW+G A G Y A + G ++ Sbjct: 168 SVKVRDAEGNVVRTYNLKSLKAGENKLTWNGEDEKAMKALPGEYQFIAEAKTADGKKMGI 227 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + ++ GV N G L +G +V++I Sbjct: 228 KTDFDGMITGVSYSNEGPVLHVGN-QAIRFSDVKKI 262 >UniRef50_D1NZK4 Basal-body rod modification protein FlgD n=3 Tax=Providencia RepID=D1NZK4_9ENTR Length = 285 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 51/282 (18%) Query: 1 MSIAVTTTDPTNT---GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNEL 57 M I+ + D + G + +S+ S + D++ +FLT++V Q++NQDPT PM+N +L Sbjct: 1 MGISASMNDSLDNSVAGPAAVASNVPKKSQSDDMRDTFLTMIVTQMQNQDPTKPMDNADL 60 Query: 58 TSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGA 117 T QLAQI+T+ + KL+ ++ IS QI + QSLQA+ L+G GV+IP ++ + +E Sbjct: 61 TGQLAQIATLESMNKLSDSVSGISQQIGSGQSLQATQLVGKGVLIPRNEIILASLKKESN 120 Query: 118 VTTTT---------------------------------------------PFGVELQQAA 132 +T PFG L + A Sbjct: 121 GENSTVTKPANPLPDEVISANSPSNFGLSNLGANEGDEGSEEPQTDYISSPFGFFLPKLA 180 Query: 133 DKVTATITDKNGAVVRTIDI-GELTAGVHSFTWDGTLTDGSTAPN--GSYNVAISASNGG 189 D V TI DKN V+RTI E+ ++ WDG +G+ + G Y + A G Sbjct: 181 DTVEITIRDKNRTVIRTISYDSEVKPDIYDMAWDGRDNNGNLVADPKGKYFFDVKAVRMG 240 Query: 190 TQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +++ L + V GV G+ LD+G + L + ++ Sbjct: 241 SEIEVTKLGYTRVNGVTPGSDAPLLDVGIGQSVPLSSIFKVY 282 >UniRef50_C4XMS4 Flagellar basal-body rod modification protein FlgD n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMS4_DESMR Length = 232 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 8/196 (4%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 +FL LLV QL+ QDP +PM++ E ++LAQ S++ + ++N+ + +S Q + A Sbjct: 30 DAFLQLLVTQLQYQDPLDPMDDKEFVAELAQFSSLEQLTEINSGIEGLSTLTQEQQMIGA 89 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 N IG + GT V G T L + A + D +G +VRT+D+ Sbjct: 90 VNFIGKTIEANGTAVNVEDG-------AATSVTFTLPEDAATCLVNVLDSSGNIVRTVDL 142 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSG 211 G TAG F WDG DG+ +G Y VA++A+N G + V+G+ + + Sbjct: 143 GATTAGQVEFEWDGKDYDGNAVDDGQYQVAVTATNADGEVMTVTSTMTGTVEGIQQVSGS 202 Query: 212 NTLDLGTYGTTTLDEV 227 LD+G ++ Sbjct: 203 YYLDIGGGRYVAFTDI 218 >UniRef50_A4BQE9 Flagellar basal body rod modification protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQE9_9GAMM Length = 221 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 9/221 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T G+ T+ + +N Q FL ++VAQL+NQ+P PM N E +Q+AQ ++ SGI Sbjct: 8 TGNGIGGTAQAPKPATNEVS-QDDFLKMMVAQLQNQNPLKPMSNGEFLTQIAQFTSASGI 66 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 E+L ++ + + ++ +LQA++L+G V++ G T V L Sbjct: 67 EQLQSSFQAFQTNMQSNLALQAASLVGRQVVVQSEQGYLPAG-------GTMDATVHLPS 119 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT 190 A +T + D+ G VRT+++G G + +WDG TDG P G Y + + G Sbjct: 120 AVRNLTVAVLDEAGQRVRTLELGPQPTGDAALSWDGHDTDGKRMPAGRYRLQAQSELDGQ 179 Query: 191 QLVAQPLQFALVQGVIRGNSGN-TLDLGTYGTTTLDEVRQI 230 + Q A V V G N L+L G +LD + ++ Sbjct: 180 TVALQTRTAATVDSVTLGTDQNLELNLTGLGAVSLDAITEV 220 >UniRef50_B2PY25 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PY25_PROST Length = 279 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 45/276 (16%) Query: 1 MSIAVTTTDPTNTGVSTTSS-----SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENN 55 M IA T D + + + S D++ +FL ++V Q++NQDPT PMEN Sbjct: 1 MGIAATMYDSLDNTTAGPEPLKSNIPNKNKSQTDDMRDTFLKMIVTQMQNQDPTKPMENA 60 Query: 56 ELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLA------ 109 ELTSQLAQI+T+ + KL+ + IS QI + QSLQA+ L+G GV+IP ++ Sbjct: 61 ELTSQLAQIATLESMNKLSDKVSGISSQIGSGQSLQATQLVGKGVLIPRNEIVLAPLKTQ 120 Query: 110 -------------------------------GTGSEEGAVTTTTPFGVELQQAADKVTAT 138 G ++PFG L + AD V T Sbjct: 121 NDSDNTAISKPTNPLPDDETSRALSVANDNGGDDDASQGDYISSPFGFFLPKMADSVEIT 180 Query: 139 ITDKNGAVVRTIDIG-ELTAGVHSFTWDGTLTDGSTAPN--GSYNVAISASNGGTQLVAQ 195 I DKN A++RTI E+ ++ +WDG +G + Y + A + G ++ Sbjct: 181 IRDKNRAIIRTISYDTEVKPDIYDMSWDGRDDNGKLVADTNSKYFFDVRAVSNGAEIEVT 240 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 L + V GV G LD+G + L + ++ Sbjct: 241 KLGYTRVNGVTPGTDAPLLDVGIGQSVPLSSIFKVY 276 >UniRef50_B4SIL9 Flagellar hook capping protein n=13 Tax=Xanthomonadaceae RepID=B4SIL9_STRM5 Length = 227 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 12/219 (5%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 G++ +S++ N D Q+ FL L+ QL++QDP PM+N ++ +Q+AQ+STV GI L Sbjct: 18 GLNAPNSNATKKKNTLD-QADFLRLMTEQLQHQDPLKPMDNTQMVAQMAQMSTVQGITDL 76 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAG-TGSEEGAVTTTTPFGVELQQAA 132 N T+ + + Q L+ + L+GH V++P ++ G+ EG V AA Sbjct: 77 NKTVKGFQESMASDQVLRGAALVGHEVLVPSEKLVLEKEGTVEGTVAAP---------AA 127 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQ 191 VT ITD NGA V ++ + AG +F WDG +G G Y++ + + G Sbjct: 128 GIVTVDITDANGAKVTSLSVEAKAAGETAFKWDGKDANGKRMEPGKYSIVANHVDTAGKS 187 Query: 192 LVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A V+ V G+ G L+L GT +D V ++ Sbjct: 188 TKLSTFVQAPVESVTVGSDGLYLNLKGLGTAPIDYVLRV 226 >UniRef50_Q5X5U4 Flagellar basal-body rod modification protein FlgD n=6 Tax=Legionella RepID=Q5X5U4_LEGPA Length = 225 Score = 169 bits (427), Expect = 8e-41, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 9/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + +N+ + + Q FL L+VAQ++NQDP P N E SQLA Sbjct: 1 MTTNSVNGSNSIGGLGLNQIDSDKRQNLGQQDFLRLMVAQVQNQDPLQPQANGEFLSQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q ST GI K+ +L ++ + ++Q+LQAS L+G V++ T+ GT Sbjct: 61 QFSTNDGITKMQESLQQLASSLQSNQALQASALVGRKVLVNSNTLSLGT-------EGDV 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +++ + A I ++G +++TI +G+ G F+WDGT +G Y + Sbjct: 114 KAAIDMAPGVSNLRAAIYTESGELIKTIPLGQPEPGFFQFSWDGTDQSNQRLASGRYTIK 173 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 ++ + GG ++ + + A V V G +G L++ G+ L +VRQI Sbjct: 174 VTGTYGGQEVALKTMTSANVDSVSLGQNGEDLKLNVAGVGSVYLSQVRQI 223 >UniRef50_A7K5D2 Flagellar basal-body rod modification protein FlgD n=11 Tax=Vibrionaceae RepID=A7K5D2_VIBSE Length = 236 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 10/231 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ D + + + + Q FL+LL QL QDP P+ N+++ +Q+A Sbjct: 10 SGLSYIDQLKSLQESNKKTEESTGKQDLKQEDFLSLLTKQLSQQDPFKPVSNDQMIAQMA 69 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 +TV GI K+NT S++ + ++Q+LQAS+L+G V++PG + + A+ Sbjct: 70 SFATVDGIGKMNTQFESLNSSMTSNQALQASSLVGRDVLVPGAAGVKQDDAPMAAM---- 125 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V+L Q+ D + + D+ G +VRT ++G AG WDG G+ P G Y V Sbjct: 126 ---VKLSQSIDNLFVRVEDEAGQLVRTFEVGAKPAGDTRVLWDGKDESGNPLPAGKYKVK 182 Query: 183 ISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGT-TTLDEVRQI 230 S G +A V V+ G+ L+L + + L EV ++ Sbjct: 183 ASGLVEGESQEFPVSTYANVNSVLLGKGDGNVLLNLAGFESPVRLAEVLEV 233 >UniRef50_D1U8I5 Flagellar hook capping protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U8I5_9DELT Length = 247 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 8/232 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M TT ++S+ S A+ Q+ FLTLLVAQL +QDP NPM++ ++TSQ Sbjct: 1 MGYTDTTGVYIGAQEDRLAASNTPTSKASLGQADFLTLLVAQLTHQDPLNPMQDTDMTSQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S++ + K+N + S++ + S L A++ IG + G + G+ Sbjct: 61 LAQFSSLEQLTKINDGVQSLNTVMGKSDLLSAASYIGKDIKAEGYKISVAEGN------- 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + ++ ++ I D GA+VRT+++G AG + + WDG G+ +G+Y Sbjct: 114 ASTIYYGFGESVTEIFMNIYDSEGAIVRTVELGSKEAGTYQYKWDGRDESGNLVDDGTYG 173 Query: 181 VAISASNGGTQ-LVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V I + G + ++ Q V V+ + L L + V++I+ Sbjct: 174 VGILGKDAGGKAVMVQTEISGTVDAVVNESGTQYLRLKDGRFVSFLNVKEIV 225 >UniRef50_Q1NVF9 Flagellar hook capping protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NVF9_9DELT Length = 223 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 16/231 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M V +P N + GS++ D ++ F+ L + QL+ QDP PM++ E+ SQ Sbjct: 7 MGPGVPMAEPPN-------PNKPVGSDSLD-RADFMKLFITQLQYQDPMEPMDSYEMASQ 58 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S + K++ + + + +LQ LIG + G + G + Sbjct: 59 LAQFSNMEATMKMSDNMEKLLDYQKSQNNLQLLGLIGKNIETAGNEISMVDGEADRT--- 115 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 LQ+AA I G +VRT+D+G AG + WDG +G AP+G Y Sbjct: 116 ----SYVLQEAAAFNVVYIYGPGGQLVRTLDMGYQGAGKQTLAWDGLDNNGEVAPDGPYT 171 Query: 181 VAISA-SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + A + G+++ + V G+ T+ + + + ++ ++ Sbjct: 172 YKVDALTADGSKVEVEQRASGKVTGLDFDTGQATITVNDHAQKGVSDIIRV 222 >UniRef50_C5SD64 Flagellar hook capping protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD64_CHRVI Length = 236 Score = 167 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 130/232 (56%), Gaps = 10/232 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGS-NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 S+ +T + TN+ T + ++ TGS N A QS FL L++ QL NQDPTNP+EN + SQ Sbjct: 11 SLGLTGYNTTNSTTGTAAGTASTGSGNNALGQSDFLKLMITQLTNQDPTNPVENEDFASQ 70 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ ST++GIE+L ++ ++S + Q+++A+ L+G V++P + G + Sbjct: 71 MAQFSTLTGIEELTSSFETLSKTLLQGQTVEAATLVGQSVLVPASKADVSAGQK------ 124 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 V+L +A +V+ I D G +V+T+D+G +AG+ F WDG L +GS AP G+Y+ Sbjct: 125 -VSGAVDLTASATQVSVNIQDATGQLVQTLDLGNQSAGLIDFEWDGLLANGSAAPAGTYS 183 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQI 230 +++A G + L V+ V G LD+ G+ ++++ Sbjct: 184 FSVTAQRNGQTEALETLLDGQVKSVSLDSGTGALMLDVQGLGSVGFSSLKRV 235 >UniRef50_B7VKM1 Flagellar hook capping protein FlgD n=54 Tax=Vibrionales RepID=B7VKM1_VIBSL Length = 236 Score = 167 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 10/231 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ D + T Q FL+LL QL QDP P+ N+++ +Q+A Sbjct: 10 SGLSYVDQLKSLQDGAKKPDETTGKQDLKQDDFLSLLTKQLAQQDPFKPVSNDQMIAQMA 69 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 +TV GI K+NT S++ + ++Q+LQAS+L+G V++PG AG +G + + Sbjct: 70 SFATVDGIGKMNTQFESLNSSMTSNQALQASSLVGRDVLVPGA---AGVKQGDGGMASM- 125 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V+L QA D V + ++ G +VRT DIG +G WDG DG+ P G YNV Sbjct: 126 ---VKLPQAMDNVMVRVENEVGQLVRTFDIGSKPSGDTRVEWDGKDEDGNPLPAGKYNVK 182 Query: 183 ISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGT-TTLDEVRQI 230 S G Q +A V V+ G+ L+L + + L EV ++ Sbjct: 183 ASGLLEGENTEFQVSSYANVNSVLLGKGDGNVLLNLAGFTSPVRLAEVLEV 233 >UniRef50_C8QYQ2 Flagellar hook capping protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYQ2_9DELT Length = 251 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 9/228 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M++ + P + ++ GS++ D Q F+TL + QL++QDP PME+ E+ SQ Sbjct: 1 MTMISSGYGPDIPMANQSNHPEPVGSSSLDRQD-FMTLFITQLQHQDPMKPMESYEMASQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S++ +++ + + + +LQ +LIG + G + G Sbjct: 60 LAQFSSMEATMQMSDNMEKLLSYQMSQNNLQLLSLIGKTIETDGNEIGVTDGQVART--- 116 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 L+Q A I D G +VRTID G +AG ++ WDG G+ P+G Y Sbjct: 117 ----SYVLEQDAPFSVVYIHDAAGQLVRTIDNGYQSAGQNTLAWDGKDNSGNLVPDGMYT 172 Query: 181 VAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + A G G+++ + V G+ + + + Y + ++ Sbjct: 173 YKVDALAGDGSKVAVEQRASGKVTGLEFDSGRAAITVSGYIQKFVSDI 220 >UniRef50_D2L1Z4 Flagellar hook capping protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1Z4_9DELT Length = 235 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 Q +FL LLV QL+ QDP NPM++ E ++LAQ S++ + ++NT + +++ Q Q L Sbjct: 30 QDAFLQLLVTQLQYQDPLNPMDDKEFVAELAQFSSLEQLTEINTGIDNLAIQGTQQQLLG 89 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 A N IG + G V G + L A+ + D +G VVRT+D Sbjct: 90 AVNFIGKTIEATGNAVSLADGKA-------SAVTFTLPTDAETCLVNVLDTSGQVVRTVD 142 Query: 152 IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-ALVQGVIRGNS 210 +G TAG F WDG +G+T +G Y VA++A++ + L+ VQG+ + N Sbjct: 143 LGATTAGAVEFVWDGKDYNGNTMDDGQYQVAMTATDADSGLIKTSSTMTGTVQGIAQENG 202 Query: 211 GNTLDLGTYGTTTLDEVRQII 231 L++G ++ ++ Sbjct: 203 TYYLNIGDGRNVAFTDITNVL 223 >UniRef50_C7LRK4 Flagellar hook capping protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRK4_DESBD Length = 226 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 8/213 (3%) Query: 20 SSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 + N + +FL LLV QL+NQDP NP+++ E +QLAQ S++ + ++ + Sbjct: 14 GADTAAKNDVLGKDAFLKLLVTQLQNQDPLNPLDDKEFIAQLAQFSSLEQMTNISEGIKG 73 Query: 80 ISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139 +S + L A N IG V G + TP L AA +V A + Sbjct: 74 LSDKTAQQDMLSAVNYIGKEVTASGDGITKSG-------NYVTPVYFTLGGAAAQVYANV 126 Query: 140 TDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQ 198 D+N +VRT + AG +FTWDG +G++A +G YNV SA + G + Sbjct: 127 YDENNNIVRTEKFTSMQAGEFAFTWDGLDYNGNSANSGQYNVYFSAESPTGATVFVDTEV 186 Query: 199 FALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V + +G+ L + +++++I Sbjct: 187 SGTVTALEQGDGETFFRLSDGRKISFSDIKKVI 219 >UniRef50_A6LMJ0 Flagellar hook capping protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMJ0_THEM4 Length = 221 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 9/208 (4%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 + T+ + G + +FL LLV QLKNQDP P+++ E +Q+ Q+ST+ I Sbjct: 8 NSIYPTNVTRENGIKKELDKEAFLELLVTQLKNQDPLEPLKDREFIAQMTQLSTLEQITN 67 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 ++ ++ + Q S+++G ++ + G+ V +L++ Sbjct: 68 MSESVQKFVESSASLYRAQVSSMVGKYAVVKSNILELKNGNASTQV-------FKLEEP- 119 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI-SASNGGTQ 191 V I D+NG +V+ D+G L AG+ +F WDG DG P+G+Y + S G+ Sbjct: 120 SHVILKIYDENGKLVKEEDLGNLNAGMQTFLWDGRNKDGVKLPDGNYTFNLYSVERDGSL 179 Query: 192 LVAQPLQFALVQGVIRGNSGNTLDLGTY 219 + V+ V ++ + + Sbjct: 180 TEISAMDGGKVEAVQFRDNDVYVLVNGN 207 >UniRef50_Q1MQV6 Flagellar hook capping protein n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQV6_LAWIP Length = 279 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 11/226 (4%) Query: 10 PTNTGVSTTSSS---SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 PTN +S++ S + + FL LLV Q K QDP NPME+ E +QLAQ S Sbjct: 2 PTNGASGVSSATGIFSQQAGKSELGKEDFLKLLVTQFKYQDPLNPMEDKEFIAQLAQFSA 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + N + S+ Q + A++ IG V G V T + Sbjct: 62 LEQQMSTNEKMESLLNLQTQQQMISAASFIGKEVAARGYGVSVKGD-------TISNIQY 114 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + + K I D + ++ T+ + G+H F WDG L +GS +G Y V I+ Sbjct: 115 AINEEMVKGYVNIFDASNQLITTVQLDSKAPGIHDFDWDGLLPNGSKVSDGVYTVNIAGQ 174 Query: 187 N-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 N G ++ V+ V L L L VR+++ Sbjct: 175 NSAGAPVLVDTSVSGKVEAVTMYQGDQLLRLSDGRLVALSNVREVV 220 >UniRef50_Q21IK8 Flagellar hook capping protein n=4 Tax=Gammaproteobacteria RepID=Q21IK8_SACD2 Length = 238 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 20/243 (8%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ T + + +S + + QS+FL L++ QL+NQDP +P EN+E +Q Sbjct: 1 MTEIAATGNSFLSDMSIAKKNPTEPQSNELGQSAFLELMITQLENQDPLSPQENSEFIAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S+V ++KLN S + +Q+LQAS L+G V +P G Sbjct: 61 LAQFSSVESLDKLNNNFDSFANSFVANQALQASTLVGRSVTVPSDRTELKAG-------G 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG------------TL 168 V++ ++ + I+ + G++V I +G AG WDG Sbjct: 114 VVSASVDVPSSSGDILVNISTEGGSLVDQISLGVRPAGELVMRWDGNQMEVNGELLDWQT 173 Query: 169 TDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG-NSGNTLDLGTYGTTTLDEV 227 + + P G+Y +S G ++ A V V G N G TL+L G LD++ Sbjct: 174 SQENGIPPGTYRFDVSTRVDGEEVKLGTALSANVNSVTVGTNGGLTLNLAGIGAVGLDDI 233 Query: 228 RQI 230 +Q Sbjct: 234 KQF 236 >UniRef50_Q47I24 Flagellar hook capping protein n=2 Tax=Betaproteobacteria RepID=Q47I24_DECAR Length = 229 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 95/237 (40%), Positives = 140/237 (59%), Gaps = 18/237 (7%) Query: 5 VTTTDPTNTGVSTTSS---------SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENN 55 +TT + TN+ S ++ SS +GS AADLQ SFLT+L QLKNQDP NPM+N Sbjct: 1 MTTVNSTNSSASIINALNGGSSSSASSTSGSTAADLQDSFLTMLTTQLKNQDPLNPMDNA 60 Query: 56 ELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 ++TSQLAQIST+ GI+ LNTTL S+ + SQ+LQA+ IG V++ G+ + +G + Sbjct: 61 QMTSQLAQISTLEGIQGLNTTLTSLLSSYNTSQALQAAGAIGSQVLVEGSGLALSSGISQ 120 Query: 116 GAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAP 175 G GV L AA+ V TI D +G VV+T ++G+ +AG +F WDG G+ Sbjct: 121 G--------GVTLGSAANSVVVTIKDGSGKVVQTQELGKQSAGTVAFNWDGKDASGNQLS 172 Query: 176 NGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +G Y +++A++ GT + A P+Q V V++ S L+L + T + V Q + Sbjct: 173 DGKYTFSVAATSAAGTAVTATPIQVGTVSAVVKSGSSFVLELSSGETVAFNNVLQFM 229 >UniRef50_B6AMC0 Probable flagellar hook capping protein FlgD n=2 Tax=Leptospirillum sp. Group II RepID=B6AMC0_9BACT Length = 276 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 9/206 (4%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 FL L+++QL+ QDP +P+ N +QLAQ S + + LN +G+I+ Sbjct: 26 APPPRQKLGMGDFLHLMISQLQYQDPLHPLNNTRFAAQLAQFSQLDQLTHLNRGVGTIAH 85 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 ++ + +G V + G + A+ I D Sbjct: 86 DGADANKMMMVGFLGQRVTMKGNAFRLD-------PSGNVSLTYRQAGASQSGHLRIFDG 138 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT-QLVAQPLQFAL 201 +VRTI + + G H+ WDG G AP GSY+ I A +G + A P++ Sbjct: 139 QNHLVRTIALKPMGPGSHTLEWDGVTDQGVRAPKGSYSFEIDAMDGRHRPVAATPVETGT 198 Query: 202 VQGVIRGNSGNTLDLGTYGTTTLDEV 227 V G++ L++ ++ Sbjct: 199 VTGILFEKGQPVLEV-DGKPVAFGDI 223 >UniRef50_B7IDJ4 Basal-body rod modification protein FlgD n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDJ4_THEAB Length = 222 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 10/216 (4%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + +++S + +FL LLV QLKNQDP P+++ E +Q+ Q+ST+ I ++ Sbjct: 12 NLSTNSKKQEIKKELDKEAFLELLVTQLKNQDPLEPLKDREFIAQMTQLSTLEQITNMSE 71 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 ++ + QAS+++G ++ + G+ T+T F +E + V Sbjct: 72 SVQKFVESSASLYRAQASSMVGKYAVVKSNVLELSNGT-----TSTQVFKLE---SPSHV 123 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI-SASNGGTQLVA 194 I D+NG +VR D+G L+ G+ +F WDG DG P+G Y + S G Sbjct: 124 ILKIYDENGKLVRQEDLGNLSEGMQTFLWDGRSDDGVMLPDGKYTFNLYSVQPDGNLEEI 183 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + V+ V ++ + L + + +I Sbjct: 184 SAMDGGKVEAVQFRDNDVYV-LVNGNLYPISSIIEI 218 >UniRef50_B8J086 Flagellar hook capping protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J086_DESDA Length = 284 Score = 162 bits (410), Expect = 7e-39, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 6/232 (2%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS + + TN +T S + + SF+ LLV Q K QDP NPME+ E +Q Sbjct: 1 MSSITQSLNRTNNEFNTALSK---QKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQ 57 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ S++ + LNT++ ++ +N Q + A++ IG V + G T+ E +T Sbjct: 58 MAQFSSLEQLMNLNTSMEGLTNATNNQQMINATSYIGKQVTVSGNTI-GKVTDETTKEST 116 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSY 179 T F T T+ D + VV ++ G + F W+G TDG+ A +G Y Sbjct: 117 ITRFRYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFLWNGKATDGTVAGDGVY 176 Query: 180 NVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V + + G +++ + A V GV+ L L L VRQ+ Sbjct: 177 TVNLVLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQV 228 >UniRef50_Q39R05 Flagellar hook capping protein n=2 Tax=Geobacter RepID=Q39R05_GEOMG Length = 218 Score = 162 bits (410), Expect = 7e-39, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 9/207 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 + + FL L V QL++QDP NP +++E QLAQ++ V N+ L I Sbjct: 17 KKSTGMNKDDFLKLFVTQLQHQDPLNPADSSEFIGQLAQLTQVEQAYNTNSNLTKIIDLF 76 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 + + SL + + IG V G + GS+ G L A +V I+D +G Sbjct: 77 NGATSLSSVSYIGKSVTANGDQINLTAGSKPA-------LGYRLPADAQQVAINISDISG 129 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQ 203 VVRT+++G AG + WDG +GST P G Y+ +++ N G + PL V+ Sbjct: 130 TVVRTLNLGNTRAGDGTILWDGRNGNGSTLPAGQYSFSVTGYNAKGEKFQGNPLLVGTVE 189 Query: 204 GVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G+ + +G + L V + Sbjct: 190 GITLEGKEPNVTIGGI-SVPLSNVLSV 215 >UniRef50_A6FHZ1 Flagellar basal body rod modification protein n=1 Tax=Moritella sp. PE36 RepID=A6FHZ1_9GAMM Length = 237 Score = 162 bits (410), Expect = 8e-39, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 9/222 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T + + S Q F +LL +L QDP P+EN+E+ +Q+A +T GI Sbjct: 17 FKTEKRDAAEQAAESSRKELGQEDFFSLLTQELAFQDPFKPVENSEMVAQMASFTTADGI 76 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 + + ++ + ++Q+LQAS+L+G V+ P +T G + +EL Q Sbjct: 77 ANMGSKFEQLTTIMSSNQALQASSLVGTKVLAPASTAFLSAGE-------SVSGRIELPQ 129 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT 190 A + I ++ G V+ I++GE G +F WDGT +G+ GSY + SAS G Sbjct: 130 NAPNLRLQIANQVGEVINVINLGEQKGGPVAFEWDGTDMNGNKVAEGSYRLKASASIDGN 189 Query: 191 QLVAQPLQFALVQGVIRGN--SGNTLDLGTYGTTTLDEVRQI 230 + F V+ V GN G L+L G+ L + +I Sbjct: 190 AQDLKVSSFQHVESVNIGNTGGGIILNLKGMGSLPLSQATEI 231 >UniRef50_Q6AJT4 Related to basal-body rod modification protein (FlgD) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJT4_DESPS Length = 248 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 9/187 (4%) Query: 21 SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI 80 S ++G N+ + FLTLLVAQL+NQDP NP E E T+QLAQ S++ + +N +G++ Sbjct: 23 SLVSGKNSTMGKQEFLTLLVAQLQNQDPLNPDEGTEFTAQLAQFSSLEQLMSINKGMGNM 82 Query: 81 SGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATIT 140 NS ++ N IG V+ G + FG L + A V + Sbjct: 83 ITSTSNSDNIALLNTIGKEVLYYGDEIDFQGD--------PVEFGYMLAENATSVKIELR 134 Query: 141 DKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA 200 NG V +ID EL+ G H+FTWDG DG+ A +G+Y + ++A ++A P+ + Sbjct: 135 -LNGETVHSIDSTELSKGDHTFTWDGMTEDGNPAAHGAYKIVVAAQGAKNAIIAPPIIKS 193 Query: 201 LVQGVIR 207 V GV Sbjct: 194 KVTGVNL 200 >UniRef50_Q1JZT2 Flagellar hook capping protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZT2_DESAC Length = 222 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 9/228 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + SS+L+ A + FLTL+V QLKNQDP NP + E T+QLA Sbjct: 1 MMAEVGSTNAASSNAQLSSALSSGANALGKQDFLTLMVEQLKNQDPMNPSDATEFTAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S++ + +N L S+ Q L A LIG V+ + G+ Sbjct: 61 QFSSLEQLFNVNDNLESMGNTSAEVQRLSALALIGTDVVTASSEFEFSGGA--------V 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 FG +L A + + I + G V T ++ E +G H WDGT +G P+G+Y + Sbjct: 113 QFGYDLDGPASEGSLYIRNAAGDTVATYELTETGSGRHFLAWDGTDNNGKALPDGTYTLG 172 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +SA NG + A + + V GV + + L + G +L EV + Sbjct: 173 VSAFNGDDAVAATSMIRSRVVGVDLVDGADVL-VTDSGNFSLAEVESV 219 >UniRef50_A1VDY6 Flagellar hook capping protein n=5 Tax=Desulfovibrio RepID=A1VDY6_DESVV Length = 265 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 8/226 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + + S+ NA + +FL LLV QLK+QDP NPM++ E +QLA Sbjct: 1 MGTSVNNILGQAENEFQSAVKKSGNADLGKDAFLQLLVTQLKHQDPLNPMDDKEFVAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q +++ + +NT + S++ Q + A + IG V+ G + + Sbjct: 61 QFTSLEQLMGINTGVTSMNEAFKQQQMMNAVSYIGKDVLASGDQI-------SKIKDGVS 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + + + I + + +VR+ I AG + + WDG G+ +G Y VA Sbjct: 114 KLYFSIDEPITQGVINIFNASNELVRSEFISAKQAGDYEYVWDGKDYQGNAMADGLYKVA 173 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 ++A N G ++ V GV N L + + V Sbjct: 174 MAAENDKGKAVLVSTEVSGHVIGVETINGTQYLRMQDGRSVQFMNV 219 >UniRef50_C8WYV7 Flagellar hook capping protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYV7_DESRD Length = 227 Score = 161 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 10/225 (4%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 A+ + + + S S + + + FL LLV QL+NQDP NP + E+T+QLAQ Sbjct: 3 AIPSVNSSLAAQSVQSPERTGSQDDSLGKMDFLNLLVTQLENQDPMNPSDPTEMTAQLAQ 62 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 S++ + ++ ++ + + A +++G V + G T Sbjct: 63 FSSLEQLTNISESMEGLDAMKTAYEQNAALSMLGRNVQLEGNTFTFQN--------EPVQ 114 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 G L++AA+ V I D +G V TI + T G H+ WDGT DG + P G Y + Sbjct: 115 LGYNLERAAESVEIQIMDASGKTVDTIKGLQGTVGEHTVQWDGTDADGKSVPAGEYQFVV 174 Query: 184 SASNGGTQLV-AQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 A + G ++ P A VQGV G+ G L L + G+ L ++ Sbjct: 175 GAQDAGGNVLQPTPQVMAKVQGVDYGSGGQKL-LTSAGSIALADI 218 >UniRef50_A8F889 Flagellar hook capping protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F889_THELT Length = 219 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 11/223 (4%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 + + ST +SS T SN D + +FL LL+ QLKNQDP PM+N + +QL Q ST+ Sbjct: 3 NSIDYSYSTYTSSERTPSNTLD-KDAFLLLLITQLKNQDPLEPMDNKDFIAQLTQFSTLE 61 Query: 69 GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 I + ++ + + Q+++LIG + + G E V EL Sbjct: 62 QITNMTNSIQEFLTLQEGALQAQSASLIGKYATVQANQITVSDGVSESIV-------FEL 114 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN- 187 +AA V I D +G ++R L AG H++ WD + G +G+Y +S N Sbjct: 115 DEAAP-VIVRIYDSDGNLIREATSSTLDAGAHAYVWDARDSSGLQVEDGTYTYVVSKLNS 173 Query: 188 GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G++ ++ ++ V + + + + L + +I Sbjct: 174 DGSETEIGGIEGGKIESVKFKGNEIYVYI-SGKEYPLASIIEI 215 >UniRef50_Q485P4 Basal-body rod modification protein FlgD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485P4_COLP3 Length = 256 Score = 159 bits (401), Expect = 9e-38, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 9/208 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 GS QS F LL +L NQDPT P++NN++ SQ+ ST G+ LN + GS +G + Sbjct: 51 GSEGMLTQSDFFALLTKELANQDPTKPVDNNQMISQMTAFSTTDGVRTLNDSFGSFAGSM 110 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 +SQ+LQAS+L+G V++ G + + A V + + G Sbjct: 111 TSSQALQASSLVGRSVLVEDNVFGMAEGE-------AVKGKLVSDKPASNVKIYVENVAG 163 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQG 204 V++T+ +G++ AG +FTWDG G A G+Y I G + + V Sbjct: 164 EVIQTVPVGDVKAGGFTFTWDGQTAKGEPAEAGAYRFRIVGLVEGEAAELEAQTYRKVDS 223 Query: 205 VIRGNSG--NTLDLGTYGTTTLDEVRQI 230 V SG L+L L++V ++ Sbjct: 224 VTLAGSGGKIVLNLNGGSAMALEDVVEV 251 >UniRef50_D0L1M4 Flagellar hook capping protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1M4_HALNC Length = 245 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 130/233 (55%), Gaps = 4/233 (1%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S+ + + T +G ++TS +S G+ + D+ +SF+ LL QL+NQDPTNP +N+++ +QL Sbjct: 13 SLGLAVSSATGSGANSTSGTSGNGAESLDM-NSFMKLLTTQLQNQDPTNPTDNSQMIAQL 71 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ S++ GI +LNTT+ + +SQ +QA+ L+G ++ G T + T Sbjct: 72 AQFSSLQGISQLNTTVNGFQSTLQSSQIMQAAALVGKAAIVKGDTAHMYNSTAADGTTKA 131 Query: 122 TPF--GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 + V++ A V+ +IT+ +G VV T + + +F+WDGT+ DGS AP G+Y Sbjct: 132 SGILGAVDIPTGATSVSVSITNASGQVVDTQSVPVSGSARPTFSWDGTMPDGSVAPAGAY 191 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDL-GTYGTTTLDEVRQII 231 V +AS G AQ A++ V +SG L+L G L +V +II Sbjct: 192 TVTANASVNGQGQAAQTYVGAVISSVGVTSSGPQLNLDGGLPPAKLSDVVEII 244 >UniRef50_Q3IDW5 Flagellar biosynthesis; initiation of hook assembly n=2 Tax=Alteromonadales RepID=Q3IDW5_PSEHT Length = 225 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 9/215 (4%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 ++ + A Q F +LL QL QDP+ P +N+++ +Q+ + GI LN+ Sbjct: 18 QEKQAASKDKSDALTQEDFFSLLTQQLSFQDPSKPADNDQMIAQMTSFTMAEGISNLNSN 77 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 +++ + ++ +LQAS L+G ++ T+ + V ++ + + Sbjct: 78 FEALAASMTSNSALQASTLVGKQALLESDTLDLNEAGDARG-------SVVAEKPVESLK 130 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 I D++G +VRTID+G AG F WDG G P G Y + S G Sbjct: 131 LRIEDESGQLVRTIDLGSQPAGAVRFAWDGKNEAGERLPPGEYKIKAEGSTNGEFSSLPI 190 Query: 197 LQFALVQGV-IRGNSGNTLDLGTYGTTTLDEVRQI 230 F ++ V I G +G ++ G L +V +I Sbjct: 191 ATFKNIESVNINGANGIIINTKE-GAVRLTDVAEI 224 >UniRef50_B9CZX6 Flagellar hook assembly protein n=2 Tax=Campylobacter RepID=B9CZX6_WOLRE Length = 234 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 8/223 (3%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 ++ T NA + +F+ LL+ +L+ QDPT+PM+ ++ +Q +Q++ + Sbjct: 14 NQAAKKSADALQKAAGTNPNAQLDKDAFMKLLLTELQYQDPTSPMDTEKMLTQTSQLAAL 73 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 E N + ++ Q+ NS ++ A +++G I + ++ G F Sbjct: 74 EMQENTNKMMQKLADQLKNSTNMYAVSVLGKMAKIGDSGIIKEEGK-------GVNFVGF 126 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 L+ AA I D NG +VRT++ GE AG ++F WDG + G+ A G+Y+V IS + Sbjct: 127 LESAAKGGKINIRDNNGRLVRTLEFGEAKAGANTFEWDGKDSSGNEAKAGTYSVEISYVD 186 Query: 188 GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ + LV+GV + + +G ++D+V++ Sbjct: 187 TAGKVKNGGVGNYLVEGVKFVDGVAQVKVGG-QYVSIDKVKEF 228 >UniRef50_B2UJX2 Flagellar hook capping protein n=6 Tax=Ralstonia RepID=B2UJX2_RALPJ Length = 215 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 90/226 (39%), Positives = 142/226 (62%), Gaps = 12/226 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T T T+T ST +S++L+ ++ DLQ++F+ LLVAQL+NQDP NPM+N+++TSQLAQI Sbjct: 1 MTVTSATST-PSTNTSNNLSITSGTDLQNTFMQLLVAQLQNQDPLNPMDNSQMTSQLAQI 59 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 +TV+GI++LNTT+ S++ Q + + QAS+LIG V +P +T+ +GS F Sbjct: 60 NTVNGIQQLNTTMSSMATQ---NAATQASSLIGRTVQVPSSTLTLASGSAN--------F 108 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 G+ + AD V TI D +G VR +D+G ++AG ++TW+G G++ +G+Y++++S Sbjct: 109 GISVPNGADDVVVTIKDASGNTVRKVDLGGMSAGSGNYTWNGKNDSGTSVADGTYSISVS 168 Query: 185 ASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A+ GG A L V GV N L L + T L ++ I Sbjct: 169 ATLGGKAATANALGADKVTGVTITNGTTQLQLASGNTAKLSDITTI 214 >UniRef50_A7HN98 Flagellar hook capping protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN98_FERNB Length = 218 Score = 157 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 10/221 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 N+ + S+S+ + + +FL LL+ QLK+QDP PM++ + +Q++Q+S++ + Sbjct: 5 VNSMSNLFSTSTDRTTKKDLDKEAFLKLLITQLKSQDPLEPMKDRDFIAQMSQLSSLEQV 64 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 ++ ++ S QA ++IG ++ + G E V L Sbjct: 65 MNMSKSVQSFVDTAAQLYRTQAVSMIGKTAVVKTNVINVENGVPESKV-------FNLDS 117 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI-SASNGG 189 A + I D NG +++ IG++ AG+ F WDG +G+ +G Y I + G Sbjct: 118 PA-NIVIKIFDSNGKLIKEEKIGQVEAGMQLFAWDGKDENGTKVKDGRYTFKILKTTPDG 176 Query: 190 TQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ +V GV + + + + E+ +I Sbjct: 177 GYEEIPSVESGIVSGVQFDGNKINVIVSNK-IYDISEISEI 216 >UniRef50_Q1N303 Flagellar hook capping protein n=1 Tax=Bermanella marisrubri RepID=Q1N303_9GAMM Length = 262 Score = 156 bits (394), Expect = 6e-37, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 110/268 (41%), Gaps = 50/268 (18%) Query: 7 TTDPTNTGVSTT------SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 T+ TN+G S+ + ++ FL LLV Q+ NQ+P P EN+E +Q Sbjct: 1 MTEVTNSGTSSQVLDQYKQKDDDKPKDNELGRNEFLKLLVTQMNNQNPLKPQENSEFVAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVT 119 LAQ S+V G+E LNTT+ S+S + +SQ+LQAS+L+G V++P G V Sbjct: 61 LAQFSSVEGLENLNTTVDSMSDGLRSSQALQASSLVGQSVIVPNQEYGFLQNGDVVAGVA 120 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG------------- 166 E+ + I +K G + TID+G G S WDG Sbjct: 121 -------EVPATTMNLNLQIKNKAGQTLETIDLGFHEKGPASLRWDGANLELDGEIVDLD 173 Query: 167 ----------TLTDGSTA------------PNGSYNVAISASNGGTQLVAQPLQFALVQG 204 DG+ P G Y +SAS G V Sbjct: 174 RSKLNRQEYFKDEDGNLVLDDNGKPIPMPYPPGEYKFELSASIDGKTEGLDTAMSGRVDS 233 Query: 205 VIRG-NSGNTLDLGTYGTTTLDEVRQII 231 V G N+ TL+L + EV+QI+ Sbjct: 234 VSIGANNAVTLNLAGGIKAAISEVKQIL 261 >UniRef50_A4BEL4 Flagellar hook capping protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEL4_9GAMM Length = 248 Score = 155 bits (392), Expect = 9e-37, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 30/250 (12%) Query: 5 VTTTDPTNTGVSTT---SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 +T + N+ + + SN ++ FL L++A+L NQDP P ++ + ++L Sbjct: 1 MTDVNNVNSALGQYDIGNKKKEETSNDELGKTEFLELMIAKLNNQDPLKPQDDAQFIAEL 60 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ STV GI+ ++ ++ +SQ+LQAS+L+G V I G T S + Sbjct: 61 AQFSTVEGIQNMSAGFEELATSYKSSQALQASSLVGGAVTIDGNT------SSKLRHGEL 114 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG--------------- 166 E+ +D + I D G ++ + +G G +F WDG Sbjct: 115 VYGSAEIPSGSDNLFLQIEDSTGQIIEDVPLGYQPNGELTFKWDGANLEVNGELADIDYS 174 Query: 167 ---TLTDGSTA--PNGSYNVAISASNGGTQLVAQPLQFALVQGVI-RGNSGNTLDLGTYG 220 T +G+ P G Y I S G V V V GN+ L+L + Sbjct: 175 KFETDENGNIIPHPAGDYTFRIQGSVVGQAQVMDVSMSDRVDSVTILGNNDIQLNLASGE 234 Query: 221 TTTLDEVRQI 230 T T+ +V+QI Sbjct: 235 TATMADVKQI 244 >UniRef50_Q1ZFB9 Flagellar basal body rod modification protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZFB9_9GAMM Length = 232 Score = 155 bits (392), Expect = 9e-37, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 11/217 (5%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 S++ Q F LL QL QDP P++N+E+ +Q+A +T GI K+ Sbjct: 20 QVSANKDVDKKQQLEQEDFFALLSQQLAYQDPFKPVDNSEMIAQMASFTTAEGITKMGNE 79 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTT-VLAGTGSEEGAVTTTTPFGVELQQAADKV 135 + G + +SQ+L+AS+L+G V+IP T G+++T T A V Sbjct: 80 FAGLKGVLSSSQALEASSLVGKKVLIPSDTGYSMEDKGLSGSLSTKT--------GAYSV 131 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 + DKNGAVV+T+ +G++ G F WDG + G G Y G + Sbjct: 132 MVDVQDKNGAVVKTLTLGDIDTGNQRFNWDGLDSQGKRVAPGKYTFNAHGMVNGKGERLE 191 Query: 196 PLQFALVQGVIRGNS--GNTLDLGTYGTTTLDEVRQI 230 +A V+ V G G +L+L L + ++ Sbjct: 192 SNVYAHVESVSLGGGQAGVSLNLKGLSGIKLVDAIEV 228 >UniRef50_A4SL11 Flagellar hook capping protein FlgD n=3 Tax=Aeromonas RepID=A4SL11_AERS4 Length = 242 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 8/231 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A T++ + +T ++ + T Q+SFL LL QL QDP P++N ++ SQ+ Sbjct: 1 MADTSSVNGISRTTTQTTDTTTAPKKELDQASFLKLLTMQLSYQDPFKPVDNAQMLSQMT 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 +ST GI L+T +G+++ + +SQ+LQAS L+G V++ EG++ Sbjct: 61 SMSTSEGINSLSTQMGNLNTLMTSSQALQASALVGQNVLLQSNVGFLEN---EGSIGGVV 117 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 GVE + V T+ D+ G V++ + G FTWDG +G +G Y + Sbjct: 118 AVGVENKY--TSVKITVEDEKGQVIKEFALEGDQKGNVEFTWDGKDKNGEPVASGKYVLK 175 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 + +N G + V V+ GN N L+L GTTTL+ + QI Sbjct: 176 ANGNNSEGKSESIATFAYGKVDSVVLGNGTNPTQLNLKGLGTTTLNSILQI 226 >UniRef50_A8FXW6 Flagellar hook capping protein n=21 Tax=Shewanella RepID=A8FXW6_SHESH Length = 282 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 13/234 (5%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 + TT +P + SS+ N+ +L Q F +LL QL QDP P++N+++ SQ Sbjct: 42 TADSTTGNPFIDSIRLPEESSIPEPNSQELTQEDFFSLLSQQLSMQDPFKPVDNDQMISQ 101 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTT--VLAGTGSEEGAV 118 +A STV GI+ LN + +++ + +SQ+LQAS L+G V+IP T + A S G + Sbjct: 102 MASFSTVDGIKNLNDEIVNLNSVMTSSQALQASGLVGQKVLIPSDTGYISAEDPSINGII 161 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 +T +A D +T + D G +V++ I G +WDG +G +G+ Sbjct: 162 ST--------PEAIDTITVRVEDDKGQLVKSFTIDGSAGGNIDVSWDGLGANGEPVASGN 213 Query: 179 YNVAISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 Y++ S G+ +A V V G ++G+ L+L G L +V + Sbjct: 214 YSIKASGRIDGSSEELPVSTYAHVTSVSLGTASTGSILNLRGVGGIKLGDVLAV 267 >UniRef50_A9BEX8 Flagellar hook capping protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEX8_PETMO Length = 220 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 9/216 (4%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ST + + +FL LLV +L+NQDPT PMEN +L +QL+Q+S+ I ++ Sbjct: 12 QSTYDAKKDREIKKELDKEAFLELLVTELQNQDPTQPMENKDLVAQLSQLSSTEQITNMS 71 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 + + + LQA++LIG V++ T+ +G EG + Sbjct: 72 QAIQEMVNSQMSLNKLQAASLIGKTVVVNDNTIDLQSGVAEGLNYGL--------DNGSQ 123 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 V I D G VV T D+G AG+HS+ W G DG+ P+G Y I G + Sbjct: 124 VYLEIYDSKGQVVYTEDLGVQEAGLHSYVWSGRNNDGTMMPDGEYLYGIYTVENGQMVAN 183 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ V+ V ++ L L V +I Sbjct: 184 TGVKSGTVEAVKFLDNELYL-LINGEMYPYSVVNEI 218 >UniRef50_A4U4K0 Basal-body rod modification protein flgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K0_9PROT Length = 220 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 8/199 (4%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 F+ LL AQL+NQDP +P + E T+QL Q S + N L + ID Sbjct: 27 DMFIQLLCAQLENQDPLDPTDATEFTNQLVQYSNLEQQMATNDKLDEVLSSIDLMSMSSG 86 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 +GH V G T+ T + L AA VT T+TD++G VV Sbjct: 87 VGYMGHTVEAEGDTISVQDDG-----TVDAAWVYSLDSAATDVTLTVTDEDGNVVWEGS- 140 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSG 211 G+ G + FTWDG +DG+T G+Y ++++A++ G + + V GV + Sbjct: 141 GDAAKGRNDFTWDGKDSDGNTVDGGAYTLSVAATDADGAAIGSTTYVSGKVTGVTSSDGT 200 Query: 212 NTLDLGTYGTTTLDEVRQI 230 L+LG G TLD + ++ Sbjct: 201 TILELGEMG-ITLDAITRL 218 >UniRef50_Q30UM0 Flagellar hook capping protein n=2 Tax=Campylobacterales RepID=Q30UM0_SULDN Length = 221 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 8/229 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+T+T + +++++ A + F+ LL+ +L++QDPT PM++ ++ SQ + Sbjct: 1 MAITSTGLNAATHAESAAANAAKDKTALGKDDFMKLLLVELQHQDPTEPMDSEKILSQTS 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q++T+ E N L ++ + SQ + IG + + G T T Sbjct: 61 QLATLEASENTNKALSELAASMSASQQFSTVSAIGKTADLGSNAITLDKG-------TNT 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 F + A T I D NG ++T+D+G GV+ FTWDGT +G +G Y Sbjct: 114 KFEMYFPDAISNGTVQILDVNGNTIKTLDVGTNPKGVYGFTWDGTNANGGAVDSGIYYAT 173 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 S +N + + ++ V L LG+ L V+++ Sbjct: 174 ASYTNPDGAALKTRVGAYPIESVRFDKGETFLKLGSN-YVPLANVKEVY 221 >UniRef50_Q1YV96 Flagellar basal body rod modification protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV96_9GAMM Length = 228 Score = 152 bits (384), Expect = 8e-36, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 10/233 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M VT T + +++ Q +FLTL AQL+NQ+P +PM+N SQ Sbjct: 1 MVSTVTDTTFLTSDQYLEKENAVAYGEDELGQDAFLTLFTAQLQNQNPLDPMDNEAFVSQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA+ S++ GI+ + +L ++ + Q + +NL+G V + G G G Sbjct: 61 LAEFSSLEGIKGMQGSLDNMVNGMRQDQMVAGANLVGKKVQVAGGNFTGGNGE------- 113 Query: 121 TTPFGVELQQAADKVTATITD-KNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 T ++L A V ++ D +G ++ G G W+G G P GSY Sbjct: 114 ITKGSIDLDYGAQSVILSVYDPASGDLIYRDTQGARLPGRAEMNWNGRDRQGEIVPEGSY 173 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 ++ SA G A V+ V S TL++G L ++ +I Sbjct: 174 LMSASAVINGKLETVPVTTMADVRSVSWDPSAQEITLEVGDNVFVALADIERI 226 >UniRef50_Q1K368 Flagellar hook capping protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K368_DESAC Length = 220 Score = 152 bits (384), Expect = 8e-36, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 10/209 (4%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 T S+ A ++ FL LLVAQL+NQDP P N E +QLA S++ N L S+ Sbjct: 18 ATASSKALGEADFLELLVAQLENQDPLEPQSNTEFIAQLATFSSLEQQTMTNNKLDSVIS 77 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 + Q L +++G V+ E G+ L + A VT I D+ Sbjct: 78 ATADMQQLAGIDMLGKTVVAQSDNFYLNGDQVE--------IGMYLPEDATSVTVNILDE 129 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV-AQPLQFAL 201 + +VV TID +L+AG + WDGT DG+ P G Y++++ A N ++ PL Sbjct: 130 DESVVATIDSSDLSAGDNFLDWDGTDMDGNPLPEGEYSLSVEAYNSDGEIDNVLPLIKTT 189 Query: 202 VQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V V SG+ L G L + + Sbjct: 190 VDEVAMTGSGSVLS-TDAGEILLSSIYSV 217 >UniRef50_Q4K867 Basal-body rod modification protein FlgD n=15 Tax=Pseudomonas RepID=Q4K867_PSEF5 Length = 242 Score = 152 bits (384), Expect = 9e-36, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 12/232 (5%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + + TT++ + G++ ++S+ + + +FL LLV QL NQ+P +P +N+ +QL Sbjct: 18 NSSKTTSNTSADGLAAATNSATGK--QSLGKDAFLKLLVTQLNNQNPLDPQDNSAFVAQL 75 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ ST+ GI LN+++ +I+G +SQ+LQAS+L+G V++ T T + + Sbjct: 76 AQFSTLEGITTLNSSVNAITGNYKSSQALQASSLVGRSVIVQTGTTQVDT-------SKS 128 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 V + + + VT T+TDK+G V+TID+G AG SF WDGT TDG+ A G+Y Sbjct: 129 MTGSVTVPSSVNSVTVTVTDKDGNTVKTIDMGSQKAGNASFVWDGTKTDGTKADPGNYTF 188 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGT---TTLDEVRQI 230 S + G A V V +G L L G L +V+ I Sbjct: 189 KASTTIDGKGTDLITYLPATVNSVTISQTGGELMLNLAGMSSPIALSKVQTI 240 >UniRef50_Q0FMJ5 Flagellar hook capping protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FMJ5_9RHOB Length = 223 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 11/226 (4%) Query: 9 DPTNTGVSTTSSSSLTGSNA--ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 DP TG T + ++ + S + ++ SF+TLL AQ++NQ+P PM++ SQLAQ+S Sbjct: 4 DPFGTGNVTGAGTTASSSMSQLSEDYESFITLLTAQIQNQNPLEPMDSTTFISQLAQLSQ 63 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V +N L IS Q+ + ++ NLIG V+ P + G A Sbjct: 64 VEQSVAVNDNLEGISSQLSSMSAIAGLNLIGRSVVAPTEQLALEAGGAAVA-------SY 116 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGV-HSFTWDGTLTDGSTAPNGSYNVAISA 185 L A V+ +I +G ++R+ D +AG H+ TWDG +G P GSY + +SA Sbjct: 117 RLAGEASNVSMSIVSADGTLLRSFDGLSGSAGELHNVTWDGMDYEGLPLPEGSYYMVVSA 176 Query: 186 SN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 S+ G + AQ + V G+ N TL + GTT + +I Sbjct: 177 SDAAGNSVPAQTYAASRVTGMTYENGLATLQMAHGGTTLAGLIEEI 222 >UniRef50_A8TLX1 Flagellar hook capping protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLX1_9PROT Length = 222 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 13/204 (6%) Query: 29 ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ 88 + FLTLL QLKNQDP +PM+N+E+ +QL Q S V N L + +++ Sbjct: 22 SKDFDMFLTLLTTQLKNQDPLDPMDNSEMVNQLVQFSNVEQQIAQNKNLEQMILLLNSQS 81 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 + + + IG V +T + T FG + A+ V I D +G ++R Sbjct: 82 AASSVSYIGRDVQFTDSTTVYDG-------TKPVTFGYTPTKTAESVKIDIADADGKIIR 134 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIR 207 T+D GE +A H+F WDG DG+ AP G Y + A + + V G Sbjct: 135 TVD-GERSASRHTFVWDGLDKDGAAAPAGQYTFLVKAKDASDKNITVDKDITGHVTGAAS 193 Query: 208 GNSGNTLDLGTYGTTTLDEVRQII 231 +GN L +G +V +++ Sbjct: 194 DATGNYLLIGDLAV----DVTKVV 213 >UniRef50_Q2LSZ6 Flagellar hook capping protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ6_SYNAS Length = 220 Score = 151 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 TN G + ++ S T +N + FL +L+AQL+NQ+P NP++ + +QLAQ S++ + Sbjct: 5 TNIGKAASAGSEGTSTNKLTGKDEFLKMLIAQLQNQNPLNPLDGTDFAAQLAQFSSLEQL 64 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 +N+TL S+S + A+NLIG V G+ ++ L + Sbjct: 65 TNMNSTLESLSALQTTQNGIMAANLIGRQVSAN-----QEGGNILTVTGSSANLSYSLAK 119 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWD-GTLTDGSTAPNGSYNVAISASN-G 188 A KVT I ++ G +V+T++ +AG ++ TWD G G+Y +SA + Sbjct: 120 DAKKVTVNIYNEEGKLVKTLEGRNQSAGHNTLTWDCGVDAQ------GAYTFDVSAEDSS 173 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G + +V V + + + ++ ++ ++ Sbjct: 174 GNDVSVNTTITGIVTEVRFTDQSLLVTVNGRQ-ISIADIVEV 214 >UniRef50_B8FK44 Flagellar hook capping protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK44_DESAA Length = 230 Score = 151 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 10/226 (4%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 T+ + + G S+ + + Q FL LL+AQLKNQDP NPME + T+QLAQ S Sbjct: 3 TSINTWSVGAGAYSNPTTESTGTGLGQEDFLQLLIAQLKNQDPLNPMEGTDFTAQLAQFS 62 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 ++ + + +L + N+ + L+G ++ ++ G ++++ F Sbjct: 63 SLEQLFGIGDSLEEMLSIQSNNGTGDVGYLLGKVIVAEDDSLTV-----NGGLSSSANFT 117 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 +E A V+ +I D G V+TI+ G L AG +S WDG G + +GSY+ +SA Sbjct: 118 IEEDAA---VSISIFDSYGIEVKTINAGSLEAGTYSVGWDGRDDSGVSVEDGSYSYEVSA 174 Query: 186 SN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + G + + V G+ L LG + + ++ Sbjct: 175 KDSSGLPVSTYTVVSGEVTGITYEYGAPYLLLGD-QMVSAGSILEV 219 >UniRef50_B5EEN7 Flagellar hook capping protein n=5 Tax=Geobacter RepID=B5EEN7_GEOBB Length = 221 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 9/207 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 + + FL L V QL+NQDP NP + + SQLAQ++ V N+ L ++ Q Sbjct: 19 KKSTGMNKDDFLKLFVTQLQNQDPLNPQDGTQFISQLAQLTQVEQAYNTNSNLQNMLNQG 78 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 NS +L A LIG V G + +GS + +L AAD+VT ++TD++G Sbjct: 79 SNSATLAAVTLIGKQVEAQGNQLELKSGS-------PSTIQYKLDSAADQVTVSVTDQSG 131 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA-SNGGTQLVAQPLQFALVQ 203 VVRT+ G AG S TWDGT G+ G+Y+ ++SA + G+ + A L V Sbjct: 132 KVVRTLSGGSKGAGAGSVTWDGTDDKGTQLAAGTYSFSVSAKTASGSNVTAAGLVMGKVD 191 Query: 204 GVIRGNSGNTLDLGTYGTTTLDEVRQI 230 GV + L +G L EV + Sbjct: 192 GVDMSGASPMLSIGAL-KLKLTEVTSV 217 >UniRef50_B9Z358 Flagellar hook capping protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z358_9NEIS Length = 230 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 132/237 (55%), Gaps = 15/237 (6%) Query: 1 MSIAVTTTDP---TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNEL 57 M++ TT +P NTG ++TSSSS++ S+A +Q+ FLTLL QLK+QDP NPMENNE+ Sbjct: 1 MTVTSTTNNPYTVLNTG-NSTSSSSVSASSAEGIQNRFLTLLTTQLKSQDPLNPMENNEI 59 Query: 58 TSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGA 117 TSQ+AQIS V+G+E L+ ++ S+ +QSL A++L+G MI G T+ G Sbjct: 60 TSQMAQISQVTGLENLSKSINSLLQSQYGTQSLLAASLVGKSAMIDGNTLTLAQG----- 114 Query: 118 VTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177 T GV L +A + T+ + NG V+ T + + +G+ +F WDGT DG+ A G Sbjct: 115 --GTAQGGVILDGSAQNLAITVKNANGEVIDTFTMNNVDSGLTTFNWDGTDKDGNAAAAG 172 Query: 178 SYNVAISASNGGT----QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y +++A+N + A+PL V V+ + G + + Q+ Sbjct: 173 VYTFSVAATNESNGKTTSVTAEPLSNQHVDAVVWDKGSPYIVTPQGGRVAIANIVQV 229 >UniRef50_Q15R84 Flagellar hook capping protein n=2 Tax=Alteromonadales RepID=Q15R84_PSEA6 Length = 228 Score = 149 bits (376), Expect = 6e-35, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 8/207 (3%) Query: 26 SNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQID 85 SN Q F +LL QL NQDP+ P++N+++ +Q+ + GI +LN + + + Sbjct: 26 SNQNLSQEDFFSLLTEQLANQDPSKPVDNDQMVAQMTSFTMADGISQLNEKFETFATSMT 85 Query: 86 NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGA 145 ++Q+LQAS+LIG V++ G + + V TI +++G+ Sbjct: 86 SNQALQASSLIGQQVLLQGDVAHMASEGQ------GVSGVVINDSTTLNTKITIENESGS 139 Query: 146 VVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 +V+T+DIG G F WDG G+ P G+Y V + G V V Sbjct: 140 IVKTLDIGTQPVGNIQFNWDGKDAAGNFMPPGNYVVKAQGNVSGEPQQLVTAVNRHVDSV 199 Query: 206 IR--GNSGNTLDLGTYGTTTLDEVRQI 230 + G L+L + LD+V Q+ Sbjct: 200 SLAGSSQGVILNLDGDVSVKLDDVIQL 226 >UniRef50_Q3A5C3 Flagellar hook initiation protein FlgD n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5C3_PELCD Length = 218 Score = 149 bits (376), Expect = 7e-35, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 12/224 (5%) Query: 10 PTNTGVSTTSSSSLTGS---NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T T V+ T+SSS+TGS ++ + FL LLV QL+NQDP NP + E TSQLAQ S+ Sbjct: 2 TTVTDVNQTASSSMTGSLTGSSNLGKDDFLLLLVTQLQNQDPLNPQDPTEFTSQLAQYSS 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + + +N L + N + A L+G V++ + G T G Sbjct: 62 LEQLFTVNDQLQQLETTNGNVVQMTALGLMGQDVVVQSDSFKLGG--------TPVTLGY 113 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +L D+V + + G V T++ +L+AG H W+GT +G++ P G Y + ISA Sbjct: 114 DLSNNVDEVQLVVQNAKGQTVATLEGTDLSAGEHFIQWNGTDANGASLPAGDYQLQISAR 173 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G PL V GV +TL + + G L +V + Sbjct: 174 RDGETASGSPLVKTAVSGVDLNGGSSTL-VTSLGEYNLSKVTSV 216 >UniRef50_A0Z355 Flagellar hook capping protein n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z355_9GAMM Length = 239 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 4/221 (1%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 + + GS FL L++AQL+NQDPT PM+ SQLAQ + VSGI++L Sbjct: 20 NPTRAAEKGKAGSAEEMGSEEFLQLMIAQLENQDPTKPMDQMAFMSQLAQFTQVSGIQEL 79 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTT--VLAGTGSEEGAVTTTTPFGVELQQA 131 N + ++ + Q+LQAS ++G V + + G V++ Sbjct: 80 NESFSGLTETLTGQQALQASQMVGRSVSTSSNVGNLSVLGTNTTGDPVMRMSASVDMGNN 139 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQ 191 A + + D NG +V + + +G WDG +G+T P G Y ++ + G Sbjct: 140 ATGGSFFVQDMNGQLVFSGTLPA-GSGTLPVVWDGVDAEGNTLPPGQYRISAEVARNGAN 198 Query: 192 LVAQPLQFALVQGVIRG-NSGNTLDLGTYGTTTLDEVRQII 231 A V V G + TL+L + ++EV++ Sbjct: 199 QAASVFAHEQVVSVAIGAGNTVTLNLANGQSLGINEVKEFF 239 >UniRef50_A6W1A4 Flagellar hook capping protein n=2 Tax=Marinomonas RepID=A6W1A4_MARMS Length = 234 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 13/226 (5%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T+ T A Q+ FL L + QLK QDPT P + N++ +Q++Q S++ Sbjct: 19 TEAAKTKAGIEKPEVKKDEAALADQNVFLKLYIEQLKGQDPTAPQDTNDMVAQMSQFSSL 78 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 + ++ L +++ + ++Q+L AS L+G +++ G+ V G E + T Sbjct: 79 ERLTSISDQLENMATSLTSNQALSASTLVGKSILMDGSKVKVGDNVEAVQLKAT------ 132 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 + + + T I D + +VRT ++ + WD +G+ P G Y A S++N Sbjct: 133 IPENSQAATLKIYDADNRLVRTAELS-----TGEYKWDKLDDEGNVLPPGEYRFAASSTN 187 Query: 188 GGTQLVAQPLQF-ALVQGVI-RGNSGNTLDLGTYGTTTLDEVRQII 231 ++ A Q +QGV G +G L++ +G L +I+ Sbjct: 188 EQGEISAISTQVPTRIQGVTINGENGTVLNVENHGKIKLTNELEIL 233 >UniRef50_A5IJB4 Flagellar hook capping protein n=6 Tax=Thermotogaceae RepID=A5IJB4_THEP1 Length = 224 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 + +FL LL+ +L+ QDP PME ++ SQL+Q++++ I L + + + Sbjct: 28 DKEAFLRLLLQELEMQDPLEPMETKDMISQLSQLASLEQITNLTSAVKDFVEAQTSVNPA 87 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 Q ++LIG V++ TV G + + + + A V I D+NG VVRT Sbjct: 88 QLASLIGKYVVVKNNTVNLVDGQSDSII-------FNVDEDA-HVVVQILDENGKVVRTE 139 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNS 210 D+G + AGVH++ WDG G + +GSY I ++ +V+ V N Sbjct: 140 DLGTVQAGVHAWQWDGRDDSGISVEDGSYTYHIYKLTSSGLEEIGGMEGGVVEAVQIKNG 199 Query: 211 GNTLDLGTYGTTTLDEVRQI 230 + L +D + +I Sbjct: 200 EGFV-LVNGSLYPVDSILEI 218 >UniRef50_C6NWL0 Flagellar basal-body rod modification protein FlgD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWL0_9GAMM Length = 231 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 10/200 (5%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 +F LLV QL NQDP NP+ N +L++QLAQ S +G++ + ++L + QI+ +Q LQA+ Sbjct: 40 TFYNLLVTQLTNQDPLNPLSNQDLSAQLAQFSVANGVQAIQSSLTGLMSQINQNQGLQAA 99 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 +LIG V G + GS A +L A+ V + + G V + G Sbjct: 100 SLIGKSVTTSGNRLQLSDGSATAA--------YDLASPANSVNVLVQNTAGQTVAVLPQG 151 Query: 154 ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS-NGGTQLVAQPLQFALVQGVIRGNSGN 212 AG+ SF+W+G G+ P G+Y ++ A+ G + + +VQ V G+SG Sbjct: 152 PQGAGLQSFSWNGQDNQGNPLPAGAYQFSVQATGANGQPVSSTSYMSGVVQSVTLGSSGP 211 Query: 213 TLDL-GTYGTTTLDEVRQII 231 TL L G G+ + V+ I+ Sbjct: 212 TLHLSGVDGSVPFNAVQNIL 231 >UniRef50_A3UFN5 Flagellar hook assembly protein FlgD n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFN5_9RHOB Length = 242 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 90/219 (41%), Gaps = 10/219 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T + S S L + AD +FLTLL QLKNQDP +P+E+ + QL Q Sbjct: 1 MTEVNAAAQTQQAQSQSKLATAGLADNFDTFLTLLTEQLKNQDPLDPLESEQFVQQLVQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V N +L ++ + L+A + IG + L G + Sbjct: 61 SSVEQQIASNESLEALLALQQSDAQLKALDFIGKEATVNTRYNLLQDGE--------AAW 112 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 L Q AD V I D+ G VR +D GE GVH+ TWDG G+T P G Y + I Sbjct: 113 EYGLSQEADSVEILIFDEKGTQVRRLD-GETGEGVHAVTWDGKDQAGNTLPEGVYEIEII 171 Query: 185 ASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDLGTYGTT 222 A + + + + V GV + Sbjct: 172 AKDADKNAIDYATRVSHRVTGVEMSGGQAQVSFANGELV 210 >UniRef50_Q2BQT9 Basal-body rod modification protein FlgD n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQT9_9GAMM Length = 235 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 9/226 (3%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 D NT T S+ S + S + + F+ L++AQL+NQDPT+P + N+ Q+A +S V Sbjct: 13 DKINTQNQTKSTQSSSTSQSQEDSDMFMRLMIAQLQNQDPTSPADTNDFMQQIATMSQVE 72 Query: 69 GIEKLNTTLGSISGQIDNSQ-SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 I L T+ S S + SQ +LQAS+++G V I G T GT V Sbjct: 73 SINNLTQTVQSTSQSMLASQAALQASSMVGQSVYIAGDTAEVGT-----VVNPYAKGSFN 127 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGT-LTDGST-APNGSYNVAISA 185 L +A +V + + +G++V T+ +G ++ G H F W DG+ P G Y + Sbjct: 128 LDSSASEVRIKVYNSSGSLVDTMQLGAVSQGEHEFAWQMKFDEDGNPEQPAGDYTFVVER 187 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLG-TYGTTTLDEVRQI 230 + G V V G +G + + T GT + EV+QI Sbjct: 188 MDDGEYNAIDTNMAYRVNSVTLGENGIGMQVNTTAGTYDVSEVKQI 233 >UniRef50_A4C6H0 Flagellar basal body rod modification protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6H0_9GAMM Length = 240 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 20/228 (8%) Query: 16 STTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ST T A +L QS F TL+ QL QDP NP +N + +Q+ +S G+ + Sbjct: 19 STKDEKIQTAEEANELSQSDFFTLMTKQLSMQDPMNPTDNEAMMAQMTNMSIAEGVSNMA 78 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 T + + ++Q+LQAS+L+G V+I V G + L+ A Sbjct: 79 TKFDQFAVSMTSNQALQASSLVGRNVLIDTHYVQNTPGE-------PITGRIPLEGPASD 131 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS-----NGG 189 + I D+ G VV I + G F WDG + G+ P G Y + + Sbjct: 132 IKVRIEDERGIVVGEIPLPASNGGNIEFAWDGKDSQGNVVPEGMYKIRAVGLMQNVPDEN 191 Query: 190 TQLVAQPLQF-----ALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 L A+ ++ + V V G +G L+ G+ +V ++ Sbjct: 192 GVLKARHVELSVQARSRVDSVSMGQNGTGLVLNFNGLGSVKFQDVLEV 239 >UniRef50_C4SBL2 Flagellar hook capping protein n=4 Tax=Enterobacteriaceae RepID=C4SBL2_YERMO Length = 237 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 85/230 (36%), Positives = 124/230 (53%), Gaps = 12/230 (5%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 N+ + + GSN DL +SF+TLLVAQ++NQDPTNPM+NN+LTSQLAQ ST SG++ Sbjct: 8 NSNNAAPKDGASNGSNPEDLTNSFMTLLVAQMQNQDPTNPMDNNQLTSQLAQFSTASGVQ 67 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGT-------GSEEGAVTTTTPF 124 +LN+T+ ++ + + Q + A++ +G V I G + + G EGA F Sbjct: 68 QLNSTVMAVGSLVTSMQQMNAADWVGRQVWIEGDSSVVNGTKESENVGEGEGAEQGNQEF 127 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS---YNV 181 G L ADKVT T+TD+ G T ++ + AGV+ T D + G Y V Sbjct: 128 GFALDSDADKVTVTLTDELGNA-YTAELKNVKAGVNKLTLDDLSNFQPSELPGKGAAYKV 186 Query: 182 AIS-ASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + S A++ G L+ A V GV +G L LG GT +L ++ I Sbjct: 187 SFSAANDDGNTPKITSLKKAKVDGVSFSPTGAVLQLGLNGTASLGDIYFI 236 >UniRef50_Q7NU17 Basal-body rod modification protein FlgD n=1 Tax=Chromobacterium violaceum RepID=Q7NU17_CHRVO Length = 224 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 113/227 (49%), Gaps = 8/227 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 S ++ + ++A LQ++FLTLL AQL QDP NPM+N++LTSQ+AQI Sbjct: 2 APGASSMQAANGGASGNTGSATSAQSLQNNFLTLLTAQLNAQDPLNPMDNSQLTSQMAQI 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S VSG++ LN T+ + + SQS+ A+ +IG+ V++ G T+ A TT Sbjct: 62 SQVSGLQSLNLTMQQLVASQNASQSMMATGMIGNNVLVAGNTL------ASPAAGQTTQG 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 GV L A ++ DKNG VV T+ + + G+++F WDGT G P G+Y + Sbjct: 116 GVMLSGPASSYQVSVLDKNGNVVDTVTVANPSKGLNTFNWDGTDGKGHALPAGNYTFQVK 175 Query: 185 AS--NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 + + G A VQ V N L L + L V Q Sbjct: 176 VTQASAGGNTTATAYNNQKVQAVSWLNGSPMLVLPGNQSVPLSAVAQ 222 >UniRef50_A7ZB54 Flagellar hook assembly protein n=1 Tax=Campylobacter concisus 13826 RepID=A7ZB54_CAMC1 Length = 235 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 7/212 (3%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + + T N+ + +F+ LL+ +L++QDPT+PM+ ++ +Q +Q+++V E N + Sbjct: 27 AAKGTGTNPNSQLDKDAFMKLLLTELQHQDPTSPMDTEKMLTQTSQLASVEMQENTNKAM 86 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 + Q+ ++ + A + +G V V ++ F + + Sbjct: 87 KELVNQLKSNANAYAISALGKMVSTGSNAVTLTDEKKDAK------FALYFKTDLANGKI 140 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 + + NG VVRT D+ E AGVH+ WDG G+ PNGSY ++ + + + + Sbjct: 141 EVKNANGQVVRTTDLNETNAGVHNLAWDGKDASGNQVPNGSYTISATYTGKDGKEYKTQV 200 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 V+ V + + + ++D+V + Sbjct: 201 GNYPVEAVKFVDGKAMMKVAG-EYVSMDKVSE 231 >UniRef50_B8DS26 Flagellar hook capping protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS26_DESVM Length = 222 Score = 146 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 8/202 (3%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 +FL LL+A+L+NQDPTNP +N E+ +Q+A STV + LN T SI + Sbjct: 24 DSDAFLQLLIAELQNQDPTNPTDNTEMINQIASFSTVEQLSALNDTATSIYDSLTAMSLN 83 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 A + IG V+ G + TT L+ A +TA + + +G ++ ++ Sbjct: 84 SAVSFIGQSVLAQGDDISKTDD-------ATTVVSFTLESDAQTLTAHVYNSSGTIINSV 136 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGN 209 +G +G +SF+WDGT G+ A NG+Y+V A + G L + V GV N Sbjct: 137 SLGASDSGTYSFSWDGTNYTGAEAANGTYSVVFEAYDEDGDSLEVSTMVAGTVSGVSVEN 196 Query: 210 SGNTLDLGTYGTTTLDEVRQII 231 L L T L++V ++ Sbjct: 197 GTTVLTLSDGRTVNLEDVYSVV 218 >UniRef50_A1WFE4 Flagellar hook capping protein n=8 Tax=Comamonadaceae RepID=A1WFE4_VEREI Length = 236 Score = 145 bits (366), Expect = 9e-34, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 11/210 (5%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 T + + ++ + Q FL LLVAQL NQDP NP++N ++TSQ+AQI+TV+GI++LN T+ Sbjct: 34 TGAKAQAVTDPSAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQIAQINTVTGIQQLNQTM 93 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ Q D Q +Q + L+G VM G+ + + +G G +L QAA V Sbjct: 94 QRMAAQFDALQVMQGAALVGRSVMTEGSALSMAGKTGQG--------GFDLAQAATGVKV 145 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 I G V+ ++D+G AG H F+WD + G+T +G ++A+NG L A L Sbjct: 146 EIMTAGGQVLDSMDLGAQDAGRHEFSWDASHYAGAT--DGL-QFRVTAANGAGALDATAL 202 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + V N L L ++ Sbjct: 203 SLSKISAVGAENGQLVLTLANGKNIGYSQI 232 >UniRef50_D1U365 Flagellar hook capping protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U365_9DELT Length = 225 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 9/228 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQS-SFLTLLVAQLKNQDPTNPMENNELTSQL 61 + V TT + ++ +S ++ T + + L S FL LL+ QL+ QDPT P++N E+ +Q+ Sbjct: 1 MTVETTSYYESLLTASSETADTSTASTSLGSMDFLNLLITQLQYQDPTEPVDNTEMVNQM 60 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 Q S + + + L ++ + S + A + +G V G ++ Sbjct: 61 TQFSQLESLTSIEDKLDELTSSLSASSTTSAISYLGKEVEASGYSLSKSGDD-------I 113 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 + + L AA+ VT I + +G +V T + L AG +SFTWDG +DGS +G+Y V Sbjct: 114 SDLYLTLDDAAESVTVNIYNSSGTIVDTETLSALEAGSYSFTWDGLDSDGSEVADGTYYV 173 Query: 182 AISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 AISA + G + V G+ + G L L T L +V Sbjct: 174 AISAEDSNGDSVDVSTTTTGTVAGISTTSDGVVLILDDGRTVNLSDVT 221 >UniRef50_A9DSD1 Flagellar hook capping protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSD1_9RHOB Length = 222 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 10/201 (4%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 +SFLTLL AQ+ NQDP NP+++ + SQLAQ++ V N +L IS + ++ Sbjct: 30 NSFLTLLTAQISNQDPLNPVDSTQFVSQLAQLTQVEQSIATNASLEQISTMLSTVGAMSD 89 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 LIG V++P + V P +L A+ VT I ++G +VR + Sbjct: 90 LQLIGRDVLVPSSQVRMTEDEF--------PLSYQLNAGAEDVTIRIYSEDGTLVREMPG 141 Query: 153 GELTAG-VHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNS 210 G V W+ + G P ++ V I+A++ G + PL A V V Sbjct: 142 PSTAEGKVIDVDWNRLDSVGLPVPPDTFRVEITATDVSGNDVGVTPLTRAEVTRVNFTGQ 201 Query: 211 GNTLDLGTYGTTTLDEVRQII 231 G L+L VR ++ Sbjct: 202 GAELELDNGEQVLSHTVRSVL 222 >UniRef50_A5ESH7 Putative flagellar basal-body rod modification protein FlgD n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESH7_BRASB Length = 235 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 12/229 (5%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 AV T T T S+ + AD SFLTLL QL +Q+P +P+ N+ T QL Q Sbjct: 12 AVATGSKTGT-EEPVKPSASARTGIADNFQSFLTLLTTQLNHQNPLDPLNVNQFTQQLVQ 70 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 + V K NT L + ++QS QA L+G ++ G+ G + Sbjct: 71 FAQVEQQLKGNTLLERLVEAQKSTQSTQALMLVGRTAVVDGSEASLAKG-------GSAV 123 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 + + ++A T ++ + G +V + L +G SF WDG ++G+ P G Y + + Sbjct: 124 WNLRSPKSA-TATVSVRNVTGQLVYSATR-ALNSGDTSFAWDGQASNGAMCPPGQYKLVV 181 Query: 184 SASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 A + GG + +V+ V S L +G LD VR++I Sbjct: 182 DAKDIGGKPIAVAAEAQGVVESVDLTKSPIMLSIGGR-NYPLDSVRRVI 229 >UniRef50_Q2RZC4 Basal-body rod modification protein FlgD n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZC4_SALRD Length = 260 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 14/234 (5%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + + D + G S + ++A ++ FL LL QL+NQDP+NPM+ + +QL Sbjct: 33 TAVLPNGDGSQDGESGGKGALSQATSANLGKNDFLKLLTTQLQNQDPSNPMKGKDFAAQL 92 Query: 62 AQISTVSGIEKLNTTLGSISGQ----IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGA 117 AQ S+V + ++ + + A++LIG V G T+ E Sbjct: 93 AQFSSVEQLTNISGQIEEQGKSDGALAQSINDSMATDLIGRTVKTSGNTLQWTGEGE--- 149 Query: 118 VTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177 FGV+L++ A + T TI D G VRT + ++ TWDGT G+ P+G Sbjct: 150 ----ATFGVDLERPASEATVTIRDAGGNAVRTKTLENVSQ-STEVTWDGTADGGAQVPDG 204 Query: 178 SYNVAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +Y+V +SA+ G G + V V + +L +G ++ V+ I Sbjct: 205 TYSVEVSATGGSGDAVEGTARLEGTVDRVTLEDGRTSLRIGGAQ-VSMGRVQSI 257 >UniRef50_A9BQ62 Flagellar hook capping protein n=4 Tax=cellular organisms RepID=A9BQ62_DELAS Length = 220 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 10/217 (4%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ++ S++S + ++ A Q FL LLVAQL NQDP NPM+N ++TSQ+AQI+TV+GI++LN Sbjct: 14 INNKSATSNSTTDPAAAQDRFLKLLVAQLNNQDPMNPMDNAQMTSQMAQINTVTGIQQLN 73 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 T+ S++GQ Q LQ + +IG V+ G T+ G + +L+ A Sbjct: 74 KTMESMAGQFTAMQVLQGTQMIGRTVLTEGNTLGVGKEK-------SYTAAFDLEGPAAD 126 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 V IT +G +V T+++G TAG + FTWDG+ G + A+N T + + Sbjct: 127 VKVQITTASGELVDTVELGSGTAGRNYFTWDGSKYTG---DASQLRYTVQATNADTVVAS 183 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 L V + TL+L V+ + Sbjct: 184 TTLSPHAVLATGTTDGKLTLELDDGTNVAYASVKAVY 220 >UniRef50_Q2LKA7 FlgDL n=1 Tax=Aeromonas hydrophila RepID=Q2LKA7_AERHY Length = 231 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 15/209 (7%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 ++++ L++ FL ++VAQ++NQDPTNP++ + +QLAQ S V G+E L Sbjct: 27 NSAAAGQNPQGGMQLRNEFLQMMVAQIQNQDPTNPLDGAQYVTQLAQFSMVEGVESLKVL 86 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 +D Q LQ++ LI VM+P T+ + T +EL AAD+V Sbjct: 87 QQKSINMMDTQQVLQSTALIDKEVMVPSKTLTQ-------SAEKTIRGQIELAGAADQVE 139 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 + D++G +V T + G+ AG G + P G Y+ + AS G ++ Sbjct: 140 LKVYDEHGTLVATKNWGDSKAG-------GLDYELPPLPAGEYSFEVKASLDGVATTSKN 192 Query: 197 LQFALVQGVIR-GNSGNTLDLGTYGTTTL 224 + V+ V G L + G L Sbjct: 193 FVASKVERVTLPGTGEIMLQVAGVGDVPL 221 >UniRef50_D1B5D1 Flagellar hook capping protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B5D1_SULD5 Length = 229 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 12/202 (5%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 FL LL+ +L++QDPT+PM+++++ +Q AQ+S++ + L +S Q+ + + A Sbjct: 32 DDFLQLLLTELEHQDPTDPMDSDKILTQTAQLSSLEASQNTTAALEELSDQLSANTNFSA 91 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 +IG + + + T+ F + T TITD NG V+TIDI Sbjct: 92 IGVIGQMASLGSSAITLEN--------KTSNFEIYFPSEIKDGTLTITDTNGKTVKTIDI 143 Query: 153 GEL---TAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN 209 G+ +GV +F WDG DG+ +G+Y+ +S ++ L V+ V + Sbjct: 144 GDSVAGKSGVIAFNWDGVDNDGTQLADGTYSATVSYTDASGALKTTQAGTYPVESVRYVD 203 Query: 210 SGNTLDLGTYGTTTLDEVRQII 231 + LG+Y +DEV + Sbjct: 204 GAAYVKLGSY-YYAIDEVLEFY 224 >UniRef50_A8FPA7 Flagellar hook capping protein n=8 Tax=Shewanella RepID=A8FPA7_SHESH Length = 221 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 16/233 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M++ TT N S +S G++AA +++ F+TL++AQ++NQDPTNP+++ E +Q Sbjct: 1 MNVNSTTNSSGNDNTSDVMNSP--GNDAASIKNEFMTLMIAQIQNQDPTNPIDSTEYVTQ 58 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V +E++ + ++N +Q++ LIG M+P + V T + G V T Sbjct: 59 LAQFSQVESLEQMRLNQSTQMVMMENLGIVQSAQLIGKDAMVPASEVTLDTETVHGKVYT 118 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 A ++++ I D++G VV T+ +G G F+ D + P G Y+ Sbjct: 119 GN--------AVEELSIDIMDESGEVVSTLKLGPQEVGDIEFSIDP---EALGLPPGKYS 167 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTL--DLG-TYGTTTLDEVRQI 230 + A++G L A A ++ + ++ + +LG GT ++ ++ ++ Sbjct: 168 IEAQATSGEETLTADTFIQAPIEKIHFVSASGMMMAELGYGLGTVSVLDISEV 220 >UniRef50_Q0FVE9 Possible FlgD protein n=2 Tax=Rhodobacteraceae RepID=Q0FVE9_9RHOB Length = 224 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 88/231 (38%), Gaps = 16/231 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAA---DLQSSFLTLLVAQLKNQDPTNPMENNELT 58 S AVT PT ST S+ NAA +FL +L Q++NQDP NP+++ + Sbjct: 3 SSAVTGAIPTGRAESTGSAGEEQTKNAAVLSSDFETFLKMLTTQMQNQDPLNPVDSTDYA 62 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 +QLA S+V N LG ++ + Q + IG V+ G Sbjct: 63 TQLATFSSVEQQVLTNDLLGDLAQAMTGGTLQQLGSWIGRDVLADAAVRFDG-------- 114 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 E + AD + D G+VV+ + + W G G+ +G Sbjct: 115 -APLVMRPEFEPGADAARLVVRDAAGSVVQRLSLDPSQP---VVAWQGVRDSGTPMASGI 170 Query: 179 YNVAISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 Y+ + + +GGT + QP Q V V R L L V Sbjct: 171 YSFEVESLSGGTTVARQPAQVYNPVIEVRREGEATLLTLSDGSEIDAKAVT 221 >UniRef50_A7HV67 Flagellar hook capping protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HV67_PARL1 Length = 226 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 11/229 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + ++ + SS + A +FL LL QL++QDPTNPM +++ T QL Sbjct: 1 MDIASASAAVQAATSGAKSSTASAALAGNFDTFLKLLTTQLQHQDPTNPMSSDQFTQQLV 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V + N L ++ + Q+ +L+G V GT L GS + Sbjct: 61 QMSGVEQSIQTNRYLETLITANAIQNASQSVSLLGKEVTGSGTGTLLADGSAK------- 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + + A T + + +GA V T + TAG H FTWDG + GS P+G+Y + Sbjct: 114 -WSFAVASDASDTTLQVINADGATVYTEKMDA-TAGTHQFTWDGKDSKGSDLPDGTYFLR 171 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++A+N G + +V G+ + L + ++ + Sbjct: 172 VTANNASGQPVAVDTRTTGIVTGIDLSTTDPLLTVNGAQ-IRYSQITSV 219 >UniRef50_B6IQD6 Basal-body rod modification protein FlgD, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQD6_RHOCS Length = 219 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 10/224 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT P + S +++ + A SFL LL AQL NQDP P++ + +QLAQ Sbjct: 1 MTTVAPPSAAGSQQTTADVASVRLAQDTQSFLKLLTAQLANQDPMAPIDATQFVTQLAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V + NT L + G++ +S +G V I + G + Sbjct: 61 SSVEQAVQSNTRLAEVLGELRSSSERLDLAYVGRTVEIESDALPLIGGGAKA-------- 112 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 + + +K I D+ G +VRT++ G G H TWDG G +G Y + ++ Sbjct: 113 SYTVPEDTEKTEIRILDQKGTIVRTLE-GSSIPGSHLLTWDGLDDSGVKLADGIYQIDVA 171 Query: 185 ASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 N G +L + V+ V R + + + D++ Sbjct: 172 PRNPAGDRLGSTVQTADTVERVRRVDGETVFVMRSGLQVQRDQI 215 >UniRef50_A6DYV3 Flagellar scaffolding protein FlgD n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYV3_9RHOB Length = 225 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 14/207 (6%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N Q FL L+ AQL+NQDP PMEN E +Q+AQ STV+G++++NTTL I QI Sbjct: 29 NGDLGQQDFLALMTAQLQNQDPFAPMENGEFLAQMAQFSTVAGLDRVNTTLSDIGSQIGG 88 Query: 87 SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD-KNGA 145 ++ AS+L+G V++PG+ V +L +AA VT ++ + GA Sbjct: 89 NRIATASSLLGQQVLVPGSLARPDASGGVHGVA-------DLPEAASAVTVIYSNAETGA 141 Query: 146 VVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 + D+G AG+ F WDG + A G+ VAI A+P +A V GV Sbjct: 142 ELHRKDMGAQPAGLMGFDWDGLPPE-IVAARGAVRVAIEV---DGDTPAEPFVYARVVGV 197 Query: 206 IRGNSG--NTLDLGTYGTTTLDEVRQI 230 G TL + YG + E+ I Sbjct: 198 QMPEGGQDMTLRVEDYGLRSSLEITDI 224 >UniRef50_Q2RWZ4 Flagellar hook capping protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWZ4_RHORT Length = 245 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 10/204 (4%) Query: 29 ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ 88 ++FLTLL +QLKNQDP +PM++ E T+QL Q + V N + + NSQ Sbjct: 28 TSDMNTFLTLLTSQLKNQDPLSPMDSTEFTNQLVQFAQVEQQINTNDNMEKLLAVSGNSQ 87 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 + A +G V T V G F L AAD VT + D+ +VR Sbjct: 88 AAMAVGYLGKYVEAESTVVALQDGQ--------AVFTYGLTAAADNVTIALYDEKDNLVR 139 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIR 207 G+LT G+H TW+G + G +G+Y +A++A++ + V G+ Sbjct: 140 AFQ-GDLTQGLHKITWNGKDSYGEKLDDGTYRIAVTATSKKDGSIETWSTTIGKVTGIAS 198 Query: 208 GNSGNTLDLGTYGTTTLDEVRQII 231 G TL + L +V + Sbjct: 199 DGKGGTLLGLGSTSVDLTKVLGVF 222 >UniRef50_B1XWJ6 Flagellar hook capping protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWJ6_LEPCP Length = 224 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 10/231 (4%) Query: 1 MSIAVT-TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 MS VT +T+ + + S S S T S FL LLVAQ++NQDP +PM+N ++TS Sbjct: 1 MSTTVTGSTNSSASIYSQLSGSGSTASTTEASADRFLKLLVAQMQNQDPLSPMDNAQVTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQI+TVSGIEK+N ++ ++ GQ Q+LQ + L+G GVM+ G + T Sbjct: 61 QMAQINTVSGIEKVNESIQAMGGQFTQMQALQGAQLVGQGVMVAGKGLNLD------PAT 114 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 G EL AD + G V+ T+D+G T+G HSFTW A Sbjct: 115 GQASAGYELAGPADAARIEVLSAAGRVIDTVDLGAETSGRHSFTWAPAQ---MPADTSGI 171 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + A+NG + + L V V + LDL + +V+ Sbjct: 172 SFRVVATNGAAAVTSTALVRDQVVAVSNSSGSLKLDLASGNQINYGDVKAF 222 >UniRef50_A1B2H8 Flagellar hook capping protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B2H8_PARDP Length = 221 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 85/229 (37%), Gaps = 13/229 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M + ++ + S S+ + S +AD FL +L Q+KNQDP NPM + + Q Sbjct: 1 MDMNTSSVTGNVYEGGSQSFSAPSESGSADQFEMFLKMLTTQIKNQDPLNPMNSTDFAVQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA S V + N L + I+ + Q SN IG V T Sbjct: 61 LATFSGVEQQVQTNLLLTQLLQNINGGELGQFSNWIGREVRTTSPVWFDQT--------- 111 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +E A+ D G V G ++ +W G G+ G Y+ Sbjct: 112 PLTLEIEGTADAETAFLVTLDDQGNEVLRQSTGAISG---EVSWHGEDPSGNMLATGFYS 168 Query: 181 VAISASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + G L + + ++ + GV +G L L G+ +D V Sbjct: 169 FRLEEMKDGRSLAPRDVAAYSRITGVELSRNGPELILLGGGSVRVDTVT 217 >UniRef50_C4TUA9 Basal-body rod modification protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TUA9_YERKR Length = 219 Score = 141 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 12/224 (5%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 N+ S N +L + F+TLLVAQ++NQDP NPM+ E SQ+AQ+S Sbjct: 6 ENSELNSKSGAVSPRQDVLPNGDELNNQFMTLLVAQIQNQDPLNPMDGTEFVSQMAQLSQ 65 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V E + L S + Q++ QS+ +NL+G VM+ V T + G + Sbjct: 66 VQSTENMAKMLKSNTVQMERMQSIATANLVGQQVMVESDDVELDTQIQNG--------RL 117 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 ELQ AA + +TD G I++GE +AG F D T + G Y ++ +S Sbjct: 118 ELQHAASPLVIHLTDDLGQE-HRINLGEQSAGSIDFAIDPTKQN---LKPGHYKLSAVSS 173 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + + + + + L++ G +++Q Sbjct: 174 SAEKFIPLELVGVVNNVRIPQRGGAAQLNIAGIGDVPYHKIKQF 217 >UniRef50_B9L649 Flagellar hook capping protein n=2 Tax=Nautiliaceae RepID=B9L649_NAUPA Length = 223 Score = 141 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 7/206 (3%) Query: 26 SNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQID 85 ++ + +F+ L +A+L+ QDPT+PM+ +++ Q A +ST+ + + +L ++S + Sbjct: 21 PDSQLDKDAFMKLFLAELQMQDPTDPMDTDKMLEQTAYLSTMEMNDNMQKSLDNLSNVLS 80 Query: 86 NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGA 145 + + IG M ++ +V FG ++ I DKNG Sbjct: 81 TTSQFSTLSAIGK--MADTGYRYVNVTDDDNSVNFDLYFGDDIASG----NVIIKDKNGN 134 Query: 146 VVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 VV+T + T GV +F WD +G P+ +Y V+ + + + L ++ V Sbjct: 135 VVKTFPLEAHTKGVLNFDWDLIGDNGERVPSDTYEVSAEYTTPDGKDMTTALGAYPIESV 194 Query: 206 IRGNSGNTLDLGTYGTTTLDEVRQII 231 N LG+ E+++I Sbjct: 195 RFENGVPYAKLGSN-YLPFSEIQEIY 219 >UniRef50_C7I103 Flagellar hook capping protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I103_THIIN Length = 232 Score = 141 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 10/230 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 +S + + S TS S+ +G + + ++F TLLV QL NQDP NPM N +L++Q Sbjct: 6 ISSNSFLSSLQTSSSSGTSGSAASGLSGLNNVNTFYTLLVTQLTNQDPMNPMSNTDLSAQ 65 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ ST SGI+ + ++ +++ Q+ +Q LQA+NL+G V+ ++ + Sbjct: 66 LAQFSTASGIQSMQQSMATLTAQLAQTQGLQAANLVGQTVVFDNNSISL-------PSSG 118 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 T G L AA V + + +G V T+ +G L GV +F WDG+ + G AP G+Y Sbjct: 119 GTAGGFTLASAAQNVQVQVLNSSGQTVDTLQLGALPTGVQTFNWDGSTSGGQQAPAGNYT 178 Query: 181 VAISASNG-GTQLVAQPLQFALVQGV-IRGNSGNTLDL-GTYGTTTLDEV 227 +SA++G G + A P VQ V + G++G L + G T L + Sbjct: 179 FNVSATDGTGQPVAAVPFGTGKVQSVYLNGSNGPALQMEGQSSTVPLSSI 228 >UniRef50_Q4JMN7 Predicted flagellar hook capping protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMN7_9BACT Length = 231 Score = 141 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 23/239 (9%) Query: 5 VTTTDPTNTGV---------STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENN 55 ++T DPT+ + GS QS FL L+ QL+NQDP PMEN Sbjct: 1 MSTIDPTSQSQLDSILQKLGVPKKEDTARGSKDTLGQSDFLKLMTTQLQNQDPFAPMENA 60 Query: 56 ELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 E +Q+AQ STV+GI ++ T L +I+ Q+ + A+NL+G VM+PG A E Sbjct: 61 EFIAQMAQFSTVTGITEMGTELKAIAEQLGEFRIATAANLLGSSVMVPGNYARADDNGEI 120 Query: 116 GAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAP 175 + +EL A+ T ++ G V+ +++G +G+ F W + Sbjct: 121 HGM-------IELPSASGITNLTFSNAAGDVLHQMELGPQPSGLVGFAW---TDIPQSVL 170 Query: 176 NG--SYNVAISASNGGTQLVAQPLQFALVQGVIRGNS--GNTLDLGTYGTTTLDEVRQI 230 +G + + A G P FA + G+ G LD+ YG E+++ Sbjct: 171 DGDEAIRIEAYADMGAGMESLTPSIFAEILAASTGDQTTGVMLDVRDYGEVRAAEIKKF 229 >UniRef50_A4XNR6 Flagellar hook capping protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNR6_PSEMY Length = 225 Score = 141 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 15/229 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 +++ + + G+ ++ S+A L+++FLTL+VAQ++NQDPT P+++ E +Q Sbjct: 3 AVSNNSQNNPVYGIDEAVKQAVNVSDATQLENNFLTLMVAQIQNQDPTKPVDSTEFLNQF 62 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 A +S V +E + + S +DN Q+L A+ L+G V + + G +G Sbjct: 63 AAMSQVKSLENMASLSKSNLVLLDNLQTLTAAGLVGQEVKVATEKLELGADKVKGE---- 118 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 V L+ AA K+T +TD NG V + I +G G F D GSY V Sbjct: 119 ----VNLEHAAGKLTLVVTDSNG-VKKEIALGSQAPGRVPFELDPKALG---LAPGSYKV 170 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + +G V V V G L++ G+ + + Sbjct: 171 EVQSDSGEYPKVE---VAGRVTQVRVSAEGPVLEIVGIGSVPFYNITEF 216 >UniRef50_B9NLP1 Basal-body rod modification protein FlgD n=2 Tax=Rhodobacteraceae RepID=B9NLP1_9RHOB Length = 221 Score = 141 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 14/228 (6%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNA-ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 +T T+P+ G + +++ T A +FL +L Q +NQDP P++++E SQLAQ Sbjct: 2 ITATNPSTLGAAQANAAGNTQRAALTSDFETFLRMLTVQARNQDPLEPLDSSEYASQLAQ 61 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 S V + N L +S + + Q ++ +G V Sbjct: 62 FSMVEQQVQANALLSDLSLTLGSVNLNQLASWVGMDVRTDAPFRFDDQ---------PVA 112 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 + +AD+ + D G VV D + F W G G+ P G+Y+ A+ Sbjct: 113 IFASAEPSADRAELVVRDSQGRVV---DRRAVPVDQAEFEWAGVDGAGNALPAGTYSAAL 169 Query: 184 SASNGGTQLVAQPLQ-FALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ + G L P F+ V G+ L L + ++D + QI Sbjct: 170 ASFDNGELLAETPAAVFSRVVEAQVGDGAVMLTLNSGAEVSVDTITQI 217 >UniRef50_A4U361 Basal-body rod modification protein FlgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U361_9PROT Length = 226 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 12/214 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 ++ T +TG S +++S G+ A+ +FLT+L QLKNQDP +PM++ E T+QL Q Sbjct: 1 MSITGIESTGASNNAANS--GTRLAENFDTFLTMLTVQLKNQDPLSPMDSTEFTNQLVQF 58 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V N L ++ + QA IGH + + + V G F Sbjct: 59 SAVEQQIASNKNLENLISVTQTNTKAQAIAYIGHTIEVAASAVPLQDGK--------AAF 110 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 L + A +T I D +G ++ + AG WDG T G +G+Y + I+ Sbjct: 111 SYTLPEDARSITVAIKDTSGKLIANLTAKT-AAGRTEMAWDGRDTTGKVVEDGAYKIEIN 169 Query: 185 ASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLG 217 A+N G + + V V ++ + +G Sbjct: 170 ATNAEGETMEVGTTVYGRVTDVASDSTETLIAMG 203 >UniRef50_B4RG78 Flagellar hook assembly protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG78_PHEZH Length = 230 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 13/205 (6%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 T +S++ + A+ +FL LL QLKNQDP +P+++N+ T Q+ Q++ V N L Sbjct: 10 TDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVEQQLLTNDLL 69 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 S+ ++ A +LIG V G + L + A+ V Sbjct: 70 KSLVSN-TSNGVSTAVSLIGKEVRAATVDAKLKDGQ--------AAWIYTLPRDANDVKL 120 Query: 138 TITDKNGAVVRTIDIGE--LTAGVHSFTWDGTLTDGSTAPNG-SYNVAISASNGG-TQLV 193 + D NG VRT+ E AG H TWDG +G P+G Y++ +SA + + Sbjct: 121 EVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLPDGGVYSLKVSAKDSDFATVP 180 Query: 194 AQPLQFALVQGVIRGNSGNTLDLGT 218 + +V GV + N + + Sbjct: 181 STVSIEGIVTGVEQSNGETLITVNG 205 >UniRef50_Q31FK9 Flagellar hook capping protein FlgD n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FK9_THICR Length = 227 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 12/234 (5%) Query: 1 MSIAVTTTDPTNT--GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 M+ +++ T+ + +++ + Q+ FL LL QL+NQDP PM+ Sbjct: 1 MATPAISSNNTDYMKALQQSTNGKSNAPDQQLGQADFLRLLTTQLQNQDPNKPMDPTNFV 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 + L Q+S + K+N ++ +++ + N Q +Q+++LIG V G T+ G+E Sbjct: 61 TDLTQMSQLEATTKMNQSMLAMTTGLQNMQVMQSASLIGKNVQAIGDTMSHEAGTE---- 116 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 TP + L Q VT ++D +G V I + +L AG WDG G+ A +G Sbjct: 117 ---TPIRLSLDQPLKDVTVVVSDGSGP-VSEIFVDDLNAGEKMVNWDGKDKLGNVAGSGE 172 Query: 179 YNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGT-TTLDEVRQI 230 Y + + + G + + + V + + G T G +D++R+I Sbjct: 173 YTLTVFGLDKEGELQSIKTIVPSKVNSISINDDGTTTATLATGEKVKIDDIREI 226 >UniRef50_B4WBD2 Flagellar hook capping protein, putative n=2 Tax=Brevundimonas RepID=B4WBD2_9CAUL Length = 238 Score = 140 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 13/209 (6%) Query: 13 TGVSTTSSSSLTGSNA---ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 T VS+ +S S A +FLTLL Q+KNQDP +P+++NE T+QL Q++ V Sbjct: 3 TAVSSVDASGRLNSGTTMLASNFETFLTLLTTQMKNQDPLSPLDSNEFTAQLTQMAGVEQ 62 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 N L S+ + A+ IG V + G + + EL Sbjct: 63 QLLTNDLLTSLVAA-QSGNLNNAAAYIGKEVTAAWSATTLKDGKAD--------WNYELA 113 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG- 188 A T + D G VV + + G+HSFTWDG + G G Y + +SA + Sbjct: 114 SDAAAATLKVLDSKGKVVWEGPAPDKSQGLHSFTWDGKTSGGEVLTEGVYTLKVSAMDSK 173 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLG 217 + +Q L V+GV N L +G Sbjct: 174 NANVASQALTQGRVKGVEMYNGEPYLVVG 202 >UniRef50_A0RLY6 Flagellar hook assembly protein n=3 Tax=Campylobacter RepID=A0RLY6_CAMFF Length = 263 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 8/214 (3%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 +S + T + + +FL LL+ +L+ QDPT PM++ ++ Q +Q++T+ E N Sbjct: 32 NNASGTGTNPYSQLDKDAFLKLLLVELQYQDPTEPMDSAKMLEQTSQLATLEMQENTNKV 91 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 + ++ Q+ +S S+ A + +G + T++ F + + Sbjct: 92 MKQLTTQMQSSLSMTAMSALGK-------MANLSNAVSKDTTTSSVDFSLYFPNDVKSGS 144 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 I D + +V+ I EL +G++ F WDGT +G G Y + + ++ Sbjct: 145 IQIYDSSENLVKNIKFDELKSGINKFNWDGTDNNGDITLPGEYLIKATYTDTSGNSGESI 204 Query: 197 LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L V+ V N + + ++D++R+ Sbjct: 205 LGSYPVEAVKFVNGIAQIKIAG-EYVSMDKIREF 237 >UniRef50_Q2C8I4 Flagellar basal body rod modification protein n=3 Tax=Vibrionaceae RepID=Q2C8I4_9GAMM Length = 226 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 18/232 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 +S V + TN V+ +++ ++A L++ F+ L+VAQ++NQDP NP++ E Q Sbjct: 9 LSTDVPAIESTNMSVAGNPNNA---NDANSLKNEFINLMVAQIQNQDPLNPLDGTEYVGQ 65 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V E + + + +DN Q L + L+G V + G+ + ++ Sbjct: 66 LAQFSQVESTENMAKLMQNSMVLLDNMQVLSTAGLVGQTVYVEGSEIELADDKQQKG--- 122 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +EL A++ V+ +TD+ G + + +G G FT D D G Y Sbjct: 123 ----RIELNHASNTVSIVLTDQLGNQ-KIMPLGPKNKGDVEFTIDPNALD---LAKGKYQ 174 Query: 181 VAISASNGGTQLVAQPLQFALVQGV-IRGNSGNTL-DLGTYGTTTLDEVRQI 230 ++I L V V + N G L ++ G ++ Q Sbjct: 175 ISIEVEKD--LPQPSVLLAGEVSQVRVPSNGGAALVNVEGIGQVPFYQISQF 224 >UniRef50_B3EBG4 Flagellar hook capping protein n=2 Tax=Desulfuromonadales RepID=B3EBG4_GEOLS Length = 223 Score = 139 bits (350), Expect = 7e-32, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 9/226 (3%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 TT + + T++S +FL L +AQ++ QDP P + N++ SQ++Q++ Sbjct: 3 TTVSGVTSASTATAASDAMKQTFGMDTDAFLKLFIAQIQYQDPLAPQDTNDMLSQISQLT 62 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 V T L ++ NS +L + LIG ++ G ++ T Sbjct: 63 QVEQSYNTATALNNLLTAQSNSLALSSVGLIGKDIVALGDSLNFDG-------TNPVTLS 115 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 + A T TI +++G VVRTID+G G ++ WDG G+ G+Y+ +IS Sbjct: 116 YQKTSATTGTTLTIKNESGQVVRTIDLGAQEVGDATYQWDGKDAQGNVLAAGAYSFSISG 175 Query: 186 SNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ G A GV N + +G +V ++ Sbjct: 176 TDALGETQQAITYTTGRADGVTFDNGVAYITIGAV-LVPFADVMRV 220 >UniRef50_A5V5R8 Flagellar hook capping protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5R8_SPHWW Length = 226 Score = 139 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 12/221 (5%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 G +S+++ SN + Q+ FL LL Q++ QDP NP++N ++ +Q+AQ S +GI + Sbjct: 14 NGAKNSSTTTTKKSNESLSQNDFLKLLTTQMQTQDPFNPVDNTQMVAQMAQFSQTTGIAE 73 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLA-GTGSEEGAVTTTTPFGVELQQA 131 +N +L S+ + S+ A+N IG ++P A GS G VT L A Sbjct: 74 MNQSLKSMVQSLQQSRVADAANWIGKAALLPSKAASALADGSFAGNVT--------LPDA 125 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQ 191 A +V ++ D +G VV T + AG F WDG DG+ G + SA + Q Sbjct: 126 ASRVDISLVDGSGTVVYTGSATNVPAGDVPFYWDGKDQDGNPVA-GPLTIVASAKDSQAQ 184 Query: 192 LVA--QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +A +A V V SG+T + G + Q+ Sbjct: 185 AMAGITTSSWATVASVSSPASGSTKIVTPLGNFDPADALQL 225 >UniRef50_A6FKY3 Possible FlgD protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FKY3_9RHOB Length = 233 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 13/216 (6%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 + + T++ + + +FL +L AQ++NQDP NP+E+ + QLA STV + Sbjct: 22 SASANTTAEAPPKPALSSDFETFLKMLTAQMRNQDPLNPVESADFAVQLATFSTVEQQVR 81 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 N L ++ ++ Q S +G +GA T T V L A Sbjct: 82 TNDLLETLGDRMGAMGMSQLSGWVGMEARAIAPV------QLDGAPVTLTVPPVPL---A 132 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL 192 D D G +V+ D+ + G + W G +G+ P+G Y++A+ + + G L Sbjct: 133 DAAQIVARDSTGTIVQRSDV-SIEGG--TLQWAGVGPNGAPLPSGRYDLAVESFSNGESL 189 Query: 193 VAQPLQF-ALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 P+Q + TL L + + Sbjct: 190 GETPVQVHGRIVEARNDAGAITLVLAGGQDVPAESI 225 >UniRef50_Q5LMU9 Basal-body rod modification protein FlgD n=1 Tax=Ruegeria pomeroyi RepID=Q5LMU9_SILPO Length = 222 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 14/229 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M V +T P T + +++ S ++D +F+ +L Q K Q+P P++++E +Q Sbjct: 1 MVETVHSTRPGATSQAPQTTTPEKRSLSSDF-DTFIRMLTTQAKYQNPLEPLDSSEYAAQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V K N TL ++ ++ + + SN IG V GT Sbjct: 60 LAQFSMVEQQTKTNDTLTALVEKLGATDMAKLSNWIGKEVRAVAPANFDGT--------- 110 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 AADK + D G V ++ +W G DG NG Y+ Sbjct: 111 PVTISPAPLAAADKAFLVVRDAKGETVERY---QVPVSADPISWSGLNDDGEPRDNGLYS 167 Query: 181 VAISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 A+ + L+ + V N L L + V Sbjct: 168 FAVQSYKADELLLEEAAAVYHPVSEAQIENGEVILILEGGQAILANMVT 216 >UniRef50_A3U109 Related to basal-body rod modification protein (FlgD) n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U109_9RHOB Length = 221 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 95/219 (43%), Gaps = 10/219 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T S + S++ + + SFL LL AQL NQDP PM+++ SQLAQ+S V Sbjct: 7 TAAATSGQTLSTVASNKLSADYQSFLKLLTAQLTNQDPLEPMDSSTFVSQLAQLSQVEQS 66 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 + NT L SISGQ+ N+ LIG V +PG G F L Sbjct: 67 IQTNTHLESISGQLANAGLTSDLGLIGREVSVPGDLFDLIGGKGT--------FEYVLAT 118 Query: 131 AADKVTATITDKNGAVVRTID-IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-G 188 A++V A I D G V I+ + +HS W+G ++G+ +G Y I A+ Sbjct: 119 TANEVRAIIRDSAGNSVAQIEGLKTGAETLHSVDWNGIGSEGTPVADGIYTAEIIATGPE 178 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 G L A A V+ + + L L T V Sbjct: 179 GNVLGASAFTRATVERLTLSGGESVLHLSNGNTALSSLV 217 >UniRef50_A6F9Q1 LfgD n=1 Tax=Moritella sp. PE36 RepID=A6F9Q1_9GAMM Length = 218 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 18/226 (7%) Query: 9 DPTNTGVSTTSS--SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 +P N T + S +T ++A L++ FL ++VAQ+KNQDP +P++ E SQLAQ S Sbjct: 2 NPINNSNRTNPAQTSEVTANSALGLKNEFLQMMVAQIKNQDPLDPLDGTEYVSQLAQFSM 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V G+E L S + + Q LQ++ LIG V++P T + A G + V + Sbjct: 62 VEGVEGLRAGQSSQAEMLYTQQVLQSTALIGTTVLVPSTGIAAKQGEKPSGV-------I 114 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 L AAD+VT T+ D NG V+ T +G +F GSY + Sbjct: 115 RLDGAADEVTLTVKDLNGKVINTQTWKYPESGDIAFEVP-------ELDEGSYVFDVEVK 167 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 G L PL V+ V +G L + G+ +L + + Sbjct: 168 MGERVLNGAPLLSREVEKVTLPKTGSDIQLSIAGMGSVSLFSISEF 213 >UniRef50_B5JZB8 Basal-body rod modification protein FlgD n=2 Tax=Rhodobacteraceae RepID=B5JZB8_9RHOB Length = 226 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 13/226 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + +T + + + + + + + +FL +L Q++NQDP NP +++E QLA Sbjct: 7 MELTQALTPVSQPAFSPQAEPSETVISSNFETFLKMLTVQMENQDPLNPTDSSEYAQQLA 66 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 S V N L ++ Q++ + Q ++ +G G +G+ T Sbjct: 67 TFSGVEQAVLTNDLLSALMVQMNTTGMAQMADWVGKEARA------IVPGHFDGSPITIA 120 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 P + ADKV ++D G V+ DI W GT +DG+ P+G Y+ Sbjct: 121 PNPAAI---ADKVELVVSDPQGNEVQRYDIPNSA---DPIEWAGTQSDGTPLPSGLYHFQ 174 Query: 183 ISASNGGTQLVAQP-LQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + +S G ++A+ +A VQ V N + L L + +V Sbjct: 175 VVSSANGVPVLAETAATYARVQEVRSENGQSVLVLNGGVSVLASDV 220 >UniRef50_B6AV37 Possible FlgD protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AV37_9RHOB Length = 224 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 14/227 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + T P +G T+ + T + +D +FL +L Q++NQDP NP+++ + QL Sbjct: 4 TTPTLQTPPLFSGQRDTNQAQKTAALGSDF-ETFLKMLTVQMENQDPLNPVDSADYAVQL 62 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 A S+V + N L S++ + + + +G V G+ E A Sbjct: 63 ATFSSVEQQVRTNDLLSSLAATMASGGVESLGHWVGMDVRAGNEGYFDGSDIELIAPD-- 120 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 ++ AD+ + D+ G + +I A F+WDG +G AP+G+Y Sbjct: 121 -------RKDADQRILVVRDETGGITTQENI---AASGTDFSWDGNFANGVEAPHGTYTF 170 Query: 182 AISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDLGTYGTTTLDEV 227 ++ + N GT L + +Q V+ + + L L + +V Sbjct: 171 SVESFNNGTLLATESVQAYNRVREAVIEDGEAMLILKGGNSVAPSDV 217 >UniRef50_C1SLD5 Flagellar hook capping protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD5_9BACT Length = 232 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 14/233 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + V+ T +T TS + QS FL L + QL+NQDPT+PM+++ + Q A Sbjct: 1 MLVSNTTTVDTKQYDTSDIEYNNTQGELSQSDFLNLFITQLQNQDPTDPMDDSAMMEQTA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDN----SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 + V + + +L I+G N + AS IG V G G Sbjct: 61 TFTQVELLTSMEKSLSEIAGGASNLNTQQLMMSASGYIGKLVEFDGNNTYLSDG------ 114 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 E ++ K T TI D G VR+ +++F W+GT DG+ G Sbjct: 115 --VAAVSFEAEEVPFKTTVTIKDSEGNFVRSFSPSVSDTDMNTFYWNGTDADGNAVDEGK 172 Query: 179 YNVAISAS-NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y ++ A G ++ LV GV + ++ ++V + Sbjct: 173 YTFSVVAIGTDGEKIDVHTYGNGLVTGVKTVDGELVYEV-DGSDIPAEDVTSV 224 >UniRef50_A3T090 Flagellar hook assembly protein FlgD n=2 Tax=Sulfitobacter RepID=A3T090_9RHOB Length = 223 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 10/220 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 N S SS+ + + + FLTLL AQ++NQDP P+++ + +QLAQ+S V Sbjct: 9 NNFTSSNQSSAQDSLGQLGEDYTKFLTLLTAQIQNQDPLEPVDSTQFVAQLAQLSQVEQA 68 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 + NT L +++ QI +L ++L+G V + V+ G T+ E+ Sbjct: 69 VQTNTQLETLTSQISGLLNLGGTDLLGRDVTVQSDVVMLEDG--------TSLTSYEVGA 120 Query: 131 AADKVTATITDKNGAVVRTID-IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-G 188 A +V+A I D G VRTI+ + ++ + WDG G+ G Y V ++A + Sbjct: 121 GAAEVSAKIYDPLGRNVRTINGLSTVSGTANPLGWDGKDDYGNAQLAGKYTVVLTAKDAA 180 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 G + QP + A V+ V L T + V+ Sbjct: 181 GNNIAIQPSRSARVEDVRFREGEIIFGLDGGETASSITVK 220 >UniRef50_A4WT49 Flagellar hook capping protein n=5 Tax=Rhodobacter sphaeroides RepID=A4WT49_RHOS5 Length = 225 Score = 136 bits (342), Expect = 6e-31, Method: Composition-based stats. Identities = 70/235 (29%), Positives = 104/235 (44%), Gaps = 16/235 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ G++ +++ GS + Q FL LL QL+NQDP PMEN E +Q Sbjct: 1 MTTTTPVDGSYAAGLAMKTATQAKGS-SNLGQEDFLKLLTTQLQNQDPFQPMENGEFLAQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ STVSGIE+LN TL I + + ++ A++LIG V++PGT A T Sbjct: 60 MAQFSTVSGIEQLNGTLSGIGEGLGSFRTATAASLIGRSVLVPGTLARADEAGGVHGAAT 119 Query: 121 TTPFGVELQQAADKVTATITDK-NGAVVRTIDIGELTAGVHSFTWDGTLTDG--STAPNG 177 L A+ V T + G ++ + +G AG +F WD S P Sbjct: 120 -------LTDPAEAVVVTYSHSVTGQLLHSQTLGPQKAGQVNFGWDEVPASLVSSRVP-- 170 Query: 178 SYNVAISASNGGTQLVAQPLQFALVQGV--IRGNSGNTLDLGTYGTTTLDEVRQI 230 V++SA+N + P +A V V G L++ G + V Sbjct: 171 -LRVSVSAANADGSVPLAPSVYARVLSVGSTTDGRGTLLEVEDQGRVPAESVTSF 224 >UniRef50_B2K1Q4 Flagellar hook capping protein n=23 Tax=Yersinia RepID=B2K1Q4_YERPB Length = 218 Score = 136 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 17/227 (7%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 + + N G + + + L + F+TLLVAQ+KNQDP NP + E SQ+AQ+S Sbjct: 5 ESRNSANVG-NQSPAPEGGLPGGEQLNNQFMTLLVAQIKNQDPLNPADGTEFVSQMAQLS 63 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 V E + L S + Q+ Q++ +NL+G VM+ G + G G +T Sbjct: 64 QVQATENMAKLLKSNTVQMAKMQTMATANLVGQQVMVEGHEITLGKDRVAGRLT------ 117 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 L+Q A + ITD G + ID+G+ AG +FT D + G Y ++ + Sbjct: 118 --LKQPAPTLLLHITDILGQE-KVIDLGKQPAGPVNFTLDPAVA---KLQPGQYQLSAVS 171 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 +G + + V V G L++ G + ++ Q Sbjct: 172 GSGEELIPLE--VAGKVNNVRISPQGGAAQLNITGLGEVSYSQITQF 216 >UniRef50_A3PFK9 Flagellar hook capping protein n=4 Tax=Rhodobacter sphaeroides RepID=A3PFK9_RHOS1 Length = 222 Score = 136 bits (341), Expect = 9e-31, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 14/229 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M++ T T ++ + +S + +D +FL +L QL+NQDP NPME+++ Q Sbjct: 1 MNVTGTETSAGSSTTRSRGDASADKAVTSDY-ETFLRMLTTQLQNQDPMNPMESDDFAMQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA S V K N L + I + + IG + G Sbjct: 60 LATFSGVEQQVKTNEILTGMGASIGVMGLSELAGWIGREAEVEAPAWFDG---------A 110 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + + AD+ + + GAVV DI G W GT G P G+Y+ Sbjct: 111 PLTLSPKPSEDADRAVLVVRNAAGAVVAQEDI---PIGGGQMEWAGTDASGQPLPKGAYS 167 Query: 181 VAISASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + + G + +A + G+SG L + V Sbjct: 168 FTVESYTGDQVTDTSKVGVYAEIIEARGGSSGTLLVMKGGIEVPASAVT 216 >UniRef50_A4EG00 Flagellar basal-body rod modification protein, putative n=2 Tax=Rhodobacteraceae RepID=A4EG00_9RHOB Length = 220 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 13/225 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T PT ST + S + FL +L AQ+K QDP NP+++ + +QLA Sbjct: 1 MDVTQPTQQVASTPPAPSAASTQIGSDFEVFLQMLTAQMKYQDPLNPVDSTDYATQLATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V N L S++ Q++ + + L+G V G Sbjct: 61 SGVEQAVLTNDLLKSLTTQMNTGGLVDMAALVGKQVKSTAPAYFDGQ---------PLTL 111 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 AAD + ++ G V+ + G + W G +GS G Y I Sbjct: 112 LPAQNVAADTAELVVRNEAGDEVQRT---AIDPGAQTLEWAGVSPNGSPFAAGIYQFEIV 168 Query: 185 ASNGGTQLVAQPLQ-FALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + +G + P++ ++ V V S L L + D+V Sbjct: 169 SKSGDDIIAQTPVETYSTVNEVRLEGSATILVLSGGVSVASDQVT 213 >UniRef50_A8LNK4 Flagellar hook capping protein FlgD n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LNK4_DINSH Length = 220 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 13/224 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T T S S+ T + A +FL +L QL+NQDP P+ + +L QLA Sbjct: 1 MDPVTTTRTATPQPSGSAQTATAIASDFETFLRMLTTQLENQDPLEPVASQDLAVQLATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V + N+ L + Q+ Q ++ +G + G G + Sbjct: 61 SGVEQQTQTNSLLEDLGSQMGLMSLSQLASWVGMDALAEGNVHFDG---------SPVEI 111 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 + A+K + ++G V+ L G + W G +G+ P+G YN+ + Sbjct: 112 KPNIPALAEKAELVVYRRDGTEVQR---NTLEPGTETVLWAGVGANGNPLPSGVYNLQVE 168 Query: 185 ASNGGTQLVAQPLQFAL-VQGVIRGNSGNTLDLGTYGTTTLDEV 227 A L +P+Q V V N TL + V Sbjct: 169 AFANNESLPTKPVQAYREVVEVKAVNGKTTLVTAGGIDVAANAV 212 >UniRef50_C8RX78 Flagellar hook capping protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX78_9RHOB Length = 217 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 76/207 (36%), Gaps = 13/207 (6%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 + A +FL ++ QLKNQDP NP+++ + QLA S+V K N+ L ++ Q Sbjct: 21 KTAIASDFETFLRMMTTQLKNQDPMNPIDSADYAVQLATFSSVEQQAKTNSLLEAMGAQF 80 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 Q + +GH ++G AD + D G Sbjct: 81 GLMGMAQMAGWVGHEARAAAPVWISGD---------PVSLAPNPAFGADSAVLVVRDFEG 131 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL-QFALVQ 203 +V ++I A W+ + G+Y + + G L + +A + Sbjct: 132 NLVNRVNI---PASADPLEWEPVDQLDAPLAEGTYTFQLESYAGEDLLATTDVESYARIV 188 Query: 204 GVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V G +G T+ L + V I Sbjct: 189 EVRGGAAGATVVLEGGIEVPVAAVTAI 215 >UniRef50_Q8D3G1 FlgD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3G1_WIGBR Length = 279 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 19/215 (8%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 +N L +FL +++ Q+KNQDPT+P++NN LT+Q+ Q+ T GIEKLN ++ I Sbjct: 75 NSNNLQSLTDNFLKMILVQIKNQDPTHPIDNNHLTTQMTQMHTALGIEKLNKSIQEIKQT 134 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 ++NSQ + SN IG VMI G +++ G+ T +G +L +D V T+TD Sbjct: 135 MNNSQYINLSNWIGKTVMIEGNPIISFNGN--------TNYGFQLSTKSDNVFLTLTDLE 186 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTA-----PNGSYNVAISA---SNGGTQLVAQ 195 G + + L +GV+ + + A P ++ +N G + + Sbjct: 187 GNIYKE-QFKNLKSGVYKLNI--KNANTNPAINENFPESRKTFKVNFEAINNDGNRPDIR 243 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L+ + VI N + L LG EV I Sbjct: 244 SLKSETINNVIFKNGSSKLSLGRGKLIDFTEVISI 278 >UniRef50_Q2NX18 Flagellar basal-body rod modification protein FlgD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NX18_SODGM Length = 269 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 21/222 (9%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + TS+ +L +FL +++AQ+KNQDPTNPM+NN+L SQ+AQ+ G+EKLN Sbjct: 55 AATSAMDAQSQGTQELMDNFLQMMLAQIKNQDPTNPMDNNQLASQMAQMHVALGVEKLNN 114 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 T+ + +++ Q++ SN +G V+I G ++ G T +G EL AD+V Sbjct: 115 TVLGMGNMVNSVQAVNLSNWVGRTVLIVGKPSVSFEGQ--------TAYGFELPSGADEV 166 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLT---------DGSTAPNGSYNVAISAS 186 T TD+ G T D ++ G + T T D A + Y+V+I A Sbjct: 167 RVTFTDEQGKT-YTQDYKDVKPGAYKLDICKTQTMPPIVLSPLDDEKAKH--YDVSIEAK 223 Query: 187 NGGT-QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 N + L+ A V+ V N L LG G+ L +V Sbjct: 224 NKDESRPTVNALKAAKVENVFFSNGSAKLALGLDGSIYLKDV 265 >UniRef50_A7JZA8 Flagellar basal-body rod modification protein FlgD n=5 Tax=Vibrio RepID=A7JZA8_VIBSE Length = 227 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 19/229 (8%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 V+T N G++ ++A+ L++ F++L+VAQ++NQDP NP++ E QLAQ Sbjct: 14 PVSTKAKENNGIAPNPKDM---NSASSLENEFISLMVAQIQNQDPLNPLDGTEYVGQLAQ 70 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 S V E ++ T+ +DN Q L + L+G V + G G + G Sbjct: 71 FSQVQSTENMSRTMQQSMILLDNMQVLSTAGLVGQTVYVNSKEFELGEGVQNGK------ 124 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 +EL ++++VT + D+ G + + +G G F+ + G Y+VA+ Sbjct: 125 --IELAHSSNQVTLVVKDEFGQSTK-VPLGAHGKGDVDFSINPEELG---LKPGKYSVAV 178 Query: 184 SASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 G Q L V+ V N+G +++ G ++ Q Sbjct: 179 EVQEG--QASPNVLMAGTVEQVRIPNTGGAALVNVHGVGNVPFYQITQF 225 >UniRef50_A0LDL3 Flagellar hook capping protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL3_MAGSM Length = 224 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 19/229 (8%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 V DP + ++TS+ +A +LQS FL +L AQL++QDP PMEN E TSQLA Sbjct: 9 NVPVYDPNASKYTSTST------DAKELQSDFLRMLTAQLEHQDPLEPMENTEFTSQLAT 62 Query: 64 ISTVSGIEKLNTTLGSISGQID--NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 +S + L + + Q QA IG V++ G T+ G + Sbjct: 63 FEGLSQQQNSTQLLQQLVELMSGGTDQVGQAVAYIGREVLVEGNTLTIGE-------SGK 115 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 EL AA V + + G ++++ + + G+ S + G G+Y Sbjct: 116 ANINFELSDAA-NVEVVMYNAAGEELKSVSLSYDSGGIKSLDLN-NAQYGDATAAGNYKF 173 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + G++ AQ L LV GV+ +G LD+ L +VR+I Sbjct: 174 RVVVRD-GSETTAQTLATGLVAGVVNDTNGVKLDVNGTQ-VDLADVRRI 220 >UniRef50_Q0EZL7 Flagellar hook capping protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZL7_9PROT Length = 221 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 12/226 (5%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T T + ++ T N + FL LLVAQ++NQ+P P + +++SQLAQ + V Sbjct: 3 TPTAATASGQAAQTTRTTQNDLGKKDIFLKLLVAQMQNQNPLKPQDPTQMSSQLAQFNMV 62 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQA--SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 N L + ++ + ++ +G V + + T + F Sbjct: 63 EQQTSSNALLQQLVDASSTQKATSSNGASYLGKNVTVQQDQI--------NYTGTASNFS 114 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 V A + T++D G VRTI++ L AG + +WDG G+ A G Y + + A Sbjct: 115 VVTDHPAAQAQITVSDSTGTPVRTINLKNLPAGGSNLSWDGITDSGAAAAQGKYTINVQA 174 Query: 186 SNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ G + + Q V V +G T+ +G + + + +I Sbjct: 175 TDAQGAAVTSHIEQSGTVDAVRFSANGTTMIIGGIAS-SQANITEI 219 >UniRef50_B6QZA4 Flagellar hook capping protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZA4_9RHOB Length = 218 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 14/225 (6%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT + ++ SS+ NA F++LL Q++NQDP P++++E T+QL Q Sbjct: 1 MTTINALTPNAGSSGSSAQNSINAN--FDLFISLLTTQIQNQDPLEPLDSSEYTNQLVQY 58 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 + V L Q+ + Q N IG V +T + Sbjct: 59 TMVEQQVATTEKLDEQLTQLKTQSASQFVNYIGKEVTAQSSTAQLKDDKASWNLDAV--- 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 +A K T TI + GA V +I +L G ++F WDG T+G+ A +G+Y++ I Sbjct: 116 ------SAGKATVTIKNSEGAEVYQKEI-DLVEGDNTFEWDGVATNGTKAEDGAYSIDII 168 Query: 185 ASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + G Q V V L +G + EV Sbjct: 169 TKDANGEPFAVQTEVKGTVDAVDFSTGDIILHMGDL-KIPVGEVT 212 >UniRef50_Q2CGF8 Flagellar hook assembly protein FlgD n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGF8_9RHOB Length = 222 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 12/202 (5%) Query: 25 GSNAADLQS--SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 GSNAA + +FL +L AQ+ NQDP PM+++ +QLAQ+S V + N L + Sbjct: 19 GSNAAMDSNYQNFLKMLTAQVTNQDPLAPMDSSTFVTQLAQLSQVEQTVQSNGHLRELLA 78 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 + + S+ LIG V + GS + + L A IT Sbjct: 79 GVQSFGSMAEVQLIGKPVTYASDRISLAGGSAD--------YLYSLDAEAASAKLVITGA 130 Query: 143 NGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFA 200 +G V+R I +T G H+ TWDG + G P+G++ I A + G Q+ + Sbjct: 131 DGQVLREIGGLAVTPGERHAVTWDGRDSQGLPVPDGTFTAEIRAVDADGEQIGYSGYASS 190 Query: 201 LVQGVIRGNSGNTLDLGTYGTT 222 + + + G G+ L + Sbjct: 191 VARALEFGPDGSMLTMENGEEV 212 >UniRef50_C4UZG9 Basal-body rod modification protein n=2 Tax=Enterobacteriaceae RepID=C4UZG9_YERRO Length = 218 Score = 132 bits (333), Expect = 7e-30, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 18/232 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+I + N+G S + + + Q F+TLLVAQ++NQDP NP + E SQ Sbjct: 1 MNINENKSLSGNSGNSLLPAGDTITGDQLNNQ--FMTLLVAQIQNQDPLNPTDGTEFVSQ 58 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ+S V E + L S + Q++ Q++ +NL+G VM+ T+ + G +T Sbjct: 59 MAQLSQVQSTENMAKLLKSNTVQMEKMQAMATANLVGQNVMVESGTIELDNKKQSGRLT- 117 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 LQQAA V +TD G I++GE +AG +FT G Y Sbjct: 118 -------LQQAASDVVVYLTDTAGRE-HPINLGEQSAGSVNFT---LDPSQHKLKPGKYQ 166 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 ++ +S+G + + V V + G L++ G +++Q Sbjct: 167 LSAVSSSGEDLIPVE--LAGAVNSVRIPSQGGAAQLNVAGIGEVPYRKIKQF 216 >UniRef50_Q1GCA6 Flagellar basal-body rod modification protein FlgD n=8 Tax=Rhodobacterales RepID=Q1GCA6_SILST Length = 231 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 13/230 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNA-ADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M+ AVT T + ++ + + ++A +FL L+ Q K QDP PM++++ T+ Sbjct: 1 MTTAVTGVGTQQTTTAGGTAGTQSATSALTSDFETFLRLMTTQAKYQDPLEPMDSSDYTA 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 QLAQ S+V N TL S+ + S Q + +G V G+ S A Sbjct: 61 QLAQFSSVEQQVLTNETLTSMLTALSLSNMSQLTGWVGREVRAQAAGYFDGSSSVSIAPN 120 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 ADKV I D A V +D+ + W+G DG+T P GSY Sbjct: 121 PAAV--------ADKVEMIIYDDQEAEVGRVDL---PVSAEPYQWNGEDGDGNTLPEGSY 169 Query: 180 NVAISASNGGTQLVAQ-PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + I +S+ G ++++ + V+ + L L + V Sbjct: 170 SFVIESSSNGEVILSELAEVYGRVEETQNVDGEVALILESGSAILATSVT 219 >UniRef50_A1VXC7 Flagellar hook assembly protein n=15 Tax=Campylobacter RepID=A1VXC7_CAMJJ Length = 294 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 14/217 (6%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 ++ NA + +FL LL+ +L++QDPT+PM+++++ +Q +Q+S + + NTT+ + Sbjct: 39 VSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVE 98 Query: 83 QID-------NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 + S S A IG + + E A+ P + V Sbjct: 99 TMQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPE----DSDENGV 154 Query: 136 TATITDKNGAVVRTI--DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV 193 T I D N +V + D ++ G+ + W G DG A +G Y V + +N + + Sbjct: 155 TLEIYDSNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKI 214 Query: 194 AQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++GV+ + + D +++I Sbjct: 215 TANYGTYPIEGVVFKDGVAYAKMAG-QEVPFDAIQEI 250 >UniRef50_Q0ARV5 Flagellar hook capping protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARV5_MARMM Length = 221 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 11/216 (5%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 +T+ S + + + AD FLTLL Q+KNQDP NP+++ + +QL S+V N Sbjct: 10 ATSPSLANSQTGLADNFEMFLTLLTEQMKNQDPLNPLDSTQFVNQLVDFSSVEQQIAQNQ 69 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 L ++ + + + IG + G + + + A Sbjct: 70 NLENLLLLQSAAAQSASVSYIGRVATALTPQAMLANGEAS--------WEYNVPEEATTS 121 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVA 194 + I D++ +V D GE TAG H FTWDG G+ +G Y++ I A N G L Sbjct: 122 SIIIRDEDDRIVARRD-GETTAGTHDFTWDGLGDGGAALDDGVYSMEIIAQNADGDDLPV 180 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A V GV S +++G L V I Sbjct: 181 TIRAAAQVTGVDLSGSEVIVEMGGI-RVPLSSVMSI 215 >UniRef50_UPI0001826559 flagellar basal body rod modification protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826559 Length = 234 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 11/230 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+ +T ++T +T S + ++AA + + F+ LLVAQ++NQDP NP + E Q Sbjct: 1 MSVNGVSTQASDTATTTDSGIAPNDNSAAGMTNLFMKLLVAQIQNQDPLNPTDGTEYVGQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ++ V +E + + +I +DN Q+L NL+G VM+ T+ +T Sbjct: 61 LAQLTQVQSMENMTVGMQNIGVLMDNLQTLSTGNLVGQKVMVQTDTLQTDG-------ST 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + + L+ AA+ VT + D++G + +++G+ AG +FT D G Y Sbjct: 114 SVDGRLTLEHAANTVTVILKDESGKETK-VELGKQEAGEVNFTVDPKALG---LKEGKYT 169 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + ++ + + S L++ G ++ Q Sbjct: 170 MTVVTDTDEQKVPIEVSGVVNNVRIPVDGSAIVLNIPGIGDVPYHQITQF 219 >UniRef50_C5SMJ0 Flagellar hook capping protein n=2 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMJ0_9CAUL Length = 224 Score = 131 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 11/225 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 VT+ T+ S+ +SS+ + + A +FL LL AQ+KNQDP +PM++ + T+QL Q Sbjct: 2 VTSVSNTSATNSSATSSTSSTNGLATTYETFLGLLTAQIKNQDPLSPMDSTQWTNQLVQY 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 ++V K N L S+ G + + N+IG + T + Sbjct: 62 TSVEQQLKANEYLKSLVG-LGAGNMASSVNMIGKTAIADIDTQTFKD--------KPLTW 112 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 EL A +V + D +G V +L G ++FTWDG + G+T G Y + ++ Sbjct: 113 HYELASTASQVGVEVLDADGKTVWKGTSDQLNKGDNTFTWDGKDSTGNTVKEGDYTLKVT 172 Query: 185 ASNGGTQLVAQPLQF-ALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 A++ +A + V + L +G + + Sbjct: 173 ATSASGSAIANAISVQQRVDATELIDGEIVLRMGN-SLIAMSAIT 216 >UniRef50_Q2WA16 Flagellar hook capping protein n=2 Tax=Magnetospirillum RepID=Q2WA16_MAGSA Length = 274 Score = 131 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 11/217 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 V T+ S + S+ + ++FLT+L QLK+QDP +PM++ + T+QL Q Sbjct: 4 VDTSATNAATASAATGSAAGKATLGSNFNTFLTMLTTQLKHQDPLSPMDSTQFTNQLVQF 63 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V N+ L + +Q+ Q + +G V + GT + + Sbjct: 64 SSVEQQINANSNLEKLIKLQQTAQTSQGISYLGQTVEVSGTDLPLQD--------SAASL 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 L + A V I D G V +I GE +G HS +W+G + G+ +G Y+ + Sbjct: 116 TYTLPKEARDVKIVIKDSTGKQVNSIA-GETASGAHSLSWNGKDSSGTQLDDGRYSFQVV 174 Query: 185 AS-NGGTQLVAQPLQFALVQGVIRG-NSGNTLDLGTY 219 A+ GT + F V V +G TL +G Sbjct: 175 ATAADGTSITTTSTSFGRVTKVTNDATNGTTLVMGAG 211 >UniRef50_A3K323 Possible FlgD protein n=1 Tax=Sagittula stellata E-37 RepID=A3K323_9RHOB Length = 188 Score = 129 bits (325), Expect = 5e-29, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 12/191 (6%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L Q++NQDP NP+++ E +QLA S+V + N L +IS + + + IG Sbjct: 1 MLTVQVQNQDPLNPVDSTEYATQLATFSSVEQQVQTNELLRNISATLGGNSLNEFGRWIG 60 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 ++ + G + + AD+ + D G V+ DI Sbjct: 61 MEGLVRAPAMFDG--------VAPVTIRPDFSEDADRAVLVVRDAAGEEVQRFDI---DV 109 Query: 158 GVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT-QLVAQPLQFALVQGVIRGNSGNTLDL 216 G + W G ++G+ P G Y + + ++ + V N L Sbjct: 110 GEDAVVWGGHDSEGNALPVGVYRFDVESYIDKRFDGSTMARVYSRIDEVRNDNGTVLLRF 169 Query: 217 GTYGTTTLDEV 227 T +E+ Sbjct: 170 ADGSEATSEEI 180 >UniRef50_Q28JI8 Basal-body rod modification protein FlgD n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JI8_JANSC Length = 221 Score = 129 bits (323), Expect = 9e-29, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 85/227 (37%), Gaps = 13/227 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + T+ G +T + T ++ FL LL Q++NQDP NP ++ E T+QLA Sbjct: 1 MDILPAGQTSPGTATAVQDNTTAASITSDFDMFLRLLTTQMQNQDPLNPSDSTEYTAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 S V + N L + + Q S IG G T Sbjct: 61 TFSGVEQQVETNDLLRDLQASFASMNMGQLSGWIGMEARADMPVNFTGQ---------PT 111 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + AD+V + ++ G VV + G F WDG DG PNG+Y ++ Sbjct: 112 TVQITPNSFADRVELVVRNQAGDVVAST---PAVLGQEPFAWDGRGNDGFPLPNGTYTLS 168 Query: 183 ISASNGGTQLVAQ-PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + +G L + F+ + + + T D V+ Sbjct: 169 AQSWSGENILDERAAFIFSEISEAQTIAGEVYVTMENGVTIPADTVQ 215 >UniRef50_A1T0J4 Flagellar basal-body rod modification protein FlgD n=12 Tax=Gammaproteobacteria RepID=A1T0J4_PSYIN Length = 230 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 12/218 (5%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 S T + ++++ L++ F+TL+VAQ++NQDP NP + E SQLAQ S V E + Sbjct: 19 ASQTKTIDANPNDSSSLKNEFITLMVAQIQNQDPLNPGDGTEYVSQLAQFSQVESAENMV 78 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 + + S +DN Q L ++L+G VMI S +G V L + + Sbjct: 79 SLMQRNSVMMDNLQVLATASLVGQEVMIRSDKF-----SVDGEPAQNLSGQVVLTSPSSQ 133 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVA 194 V I D+ G ++ + +G AG F + G+++V++ SN G + Sbjct: 134 VNLLINDQFGQ-IKKVVLGPQAAGQVDFK---LDVEALNLAKGAHSVSVELSN-GQEYQP 188 Query: 195 QPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQI 230 Q L ++ + + + L G+ ++ Q Sbjct: 189 QILLSGKIESINIPATGGASMISLRGLGSVPFYDISQF 226 >UniRef50_A2SKD5 Flagellar hook capping protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SKD5_METPP Length = 217 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 19/229 (8%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T+ +++ + S+ T ++ D FL LLV Q+KNQDP NPM+N ++TSQ+AQI Sbjct: 4 APVTNSSSSVYDALNGSTTTKTD--DGSERFLKLLVTQMKNQDPMNPMDNAQVTSQIAQI 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 +TV+GI LN T+ S+S Q+ +SQ LQ + L+GH V++ G+ + G TT Sbjct: 62 NTVTGISTLNQTVKSLSSQMLSSQVLQGAGLVGHTVLMAGSKLHFGED-------GTTAG 114 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTW---DGTLTDGSTAPNGSYNV 181 G EL AAD V I +G VV TI++G +AG F W GT TDG Sbjct: 115 GFELANAADSVKVEILSPSGRVVDTINMGAASAGRSGFEWTAPTGTSTDGM-------TF 167 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++A G T L A PL LV+ V L+L G+ +V+ I Sbjct: 168 RVTAKAGSTTLTATPLTTDLVKAVSTSGDTLNLELLFGGSIPYTQVKAI 216 >UniRef50_Q1NGN4 Flagellar scaffolding protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGN4_9SPHN Length = 219 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 12/226 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ T TD V +++ TGS D Q+SFL LL AQ++ QDP P++N E+ SQ Sbjct: 1 MTSVSTVTDSAGLSVYNPNATVGTGSATMD-QASFLKLLTAQMQYQDPFEPVDNAEMVSQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +A I+ SGI ++N L SI ++ ++ A++ IG +++ + + Sbjct: 60 MATITNSSGIAEMNANLASIKQELTGTRLGDAASWIGKSMLVQSNVAVPD-------ASG 112 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 V A + T + D +G VV+TID+G AG +F WDG G T + Sbjct: 113 YYAGQVSFADATNGATVDLVDGSGNVVKTIDLGSQQAGDVTFYWDGKDDMGETVSTDALQ 172 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDE 226 V ++ VA A VQ G+S + G+ + + Sbjct: 173 VKVNG--ATPSKVATWATIAAVQSPADGSSSKLIT--ALGSYSPSD 214 >UniRef50_Q16DP6 Flagellar basal-body rod modification protein, putative n=2 Tax=Roseobacter RepID=Q16DP6_ROSDO Length = 226 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 84/226 (37%), Gaps = 13/226 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + T ++ + + + +FL +L AQ + QDP P++++E +QLA Sbjct: 1 MDILNAQATQPTRQLGTAQASNSAALSSDFETFLKMLTAQARFQDPLEPIDSSEYAAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S V N L + Q+ ++ Q + IG G + Sbjct: 61 QFSMVEQQVLSNDLLTELGAQLGSNSIGQMAAWIGMEARTTAPVAFDG---------SPI 111 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + + AD+ +G+ V+ ++T G W G +G+ P G+Y+ Sbjct: 112 TVLPKSEAGADEAYLIAYGPDGSEVQRQ---QVTPGTDPIEWLGLDDNGAALPIGNYSFV 168 Query: 183 ISASNGGTQLVAQPLQ-FALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + G + P + ++ + R S L + +V Sbjct: 169 VESRAVGQTIGTSPAETYSRITEARREGSDTVFILNGGSPVSAADV 214 >UniRef50_D0I441 Flagellar basal-body rod modification protein FlgD n=2 Tax=Vibrionaceae RepID=D0I441_VIBHO Length = 223 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 13/232 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+A ++ + + S + + + + FLT++VAQ++NQ+P NP + + +Q Sbjct: 1 MSLAQVRSESLYSHQAVASETQVGANGMNPSSNDFLTMMVAQVQNQNPLNPTDGTQYLTQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L +S V +E + L +++ + N + LQA+NL+G V++ Sbjct: 61 LGMMSAVESLESVKVGLNNLNIGMTNVEMLQATNLVGKKVLMDVN------NGLTLQENQ 114 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 T V+ +A D + D+ G VV I +G AG+ F G + Sbjct: 115 TVDARVQFDEAVDNAKVVVYDEKGKVVEEIKLGARPAGMVEFQ-----LSAQELGTGEFY 169 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 + + G + + A V+ V + G L+L G ++ ++R+I Sbjct: 170 FDVVSERGDSADTHSMMIAADVESVNIPSDGGVIMLNLKGIGKMSMYDMREI 221 >UniRef50_A0P3G8 Flagellar hook capping protein n=2 Tax=Labrenzia RepID=A0P3G8_9RHOB Length = 219 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 13/227 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT PT+ S + S++ AD FL++L Q++NQDP +P+++ E T+QL Q Sbjct: 1 MTTVSPTSAASSQSGSATSQAGLIADY-ELFLSILTTQIQNQDPLDPLDSAEYTNQLVQY 59 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V K N L I + ++QS+ + IG+ V +T + + Sbjct: 60 SSVEQAIKQNQNLEEIIASLTSNQSMGYVSYIGNEVTADASTTTLSG--------SKASW 111 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 L++ A I + G++V + +I EL AG +F W G G A +G Y ++ Sbjct: 112 SYSLEEDA-TGEFEIRNSAGSIVYSGEI-ELAAGDGTFYWGGQTDSGQQAVDGLYTISFD 169 Query: 185 ASNGGTQL-VAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + ++ + +V V + L +G+ + V + Sbjct: 170 MKDASSRPETVKTTVSGVVDSVDWSSGEAVLKVGS-QEFPVSSVVSV 215 >UniRef50_C6BZU8 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZU8_DESAD Length = 226 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 9/232 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MSI + + TG ++TSS++ N++ Q FLTLL QL+ QDPTNP +N + +Q Sbjct: 1 MSIDAASYYSSFTGSNSTSSTTTGSDNSSLDQVDFLTLLTTQLQYQDPTNPTDNTAMINQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 + + + N L +I Q+D SL + LIG VM PG + G G Sbjct: 61 MTNYAMLDEDVAQNENLEAIINQLDALASLSTAGLIGEEVMAPGGSFSVEGGEATG---- 116 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 ++LQ A +V I D G +V TI L G T + + + +G Y Sbjct: 117 ---VTIDLQDDASEVGINIYDSEGELVDTIYFDNLEEGEIEITGAQIMAEANLENDGEYT 173 Query: 181 VAISASN-GGTQLVAQPLQFALVQGVIRGN-SGNTLDLGTYGTTTLDEVRQI 230 + A++ G + A + + R + + TL L ++ +V I Sbjct: 174 ALVFATDSDGASVEAYIKSTGTISSIGRDDSNNITLTLDDGREVSIGDVSFI 225 >UniRef50_C6XM56 Flagellar hook capping protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM56_HIRBI Length = 222 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 12/223 (5%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 N +TS+S+ + S A +FLTLL AQL+NQDP P ++ E T+QL Q S V Sbjct: 8 VNQSSGSTSNSAQSQSALASDFDTFLTLLTAQLQNQDPLEPTDSTEFTNQLVQFSGVEQQ 67 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 + N L + +++ S+ +G V I G + L Sbjct: 68 IQTNDALEQLIASNNSATGAAMSSYLGQSVEINS--------QGAGYSGEDLSWRYALAS 119 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA-PNGSYNVAISASNG- 188 A + T I DKNG V+ + + E +AG H F WDGTL+DG+ A + Y +++A + Sbjct: 120 DATEATFNIQDKNGKVLYS-EPAEKSAGSHEFVWDGTLSDGTIANEDEVYYASVTAKDSE 178 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + V GV + G + ++ +++ Sbjct: 179 ANSITTSTNVLTTVSGVDLSYDSPAIT-TKAGIFSYSDILRVM 220 >UniRef50_B0SWE2 Flagellar hook capping protein n=3 Tax=Caulobacter RepID=B0SWE2_CAUSK Length = 232 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 13/221 (5%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T T + T + + ++ A + +FL LL QLKNQDP +P + +++TSQ+ Q++ V Sbjct: 4 TATSNTVTDKINNSRTSLASNEQTFLKLLTTQLKNQDPLSPTDTSQMTSQITQMTGVEQQ 63 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 N L ++ G + NL+G V + G + + Sbjct: 64 LVTNELLTALVGMSTGGGISEGVNLMGKQVTAETAKSVLKNGEAT--------WSYTQSR 115 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-GSYNVAISASNGG 189 +A V + DK V+ T+ ++ G H+F WDG DG P+ G Y + ++A++ Sbjct: 116 SATGVKIEVLDKYDKVITTVLPDDMAGGDHTFKWDGKSKDGVKQPDGGEYTIKVTATDAE 175 Query: 190 TQLVAQPLQF---ALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + +V V + N + +G LD V Sbjct: 176 GTKITTTAKGRIEGVVTKVTNESGVNMVWIGDT-KVPLDSV 215 >UniRef50_C0QPA6 Flagellar hook capping protein FlgD n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA6_PERMH Length = 215 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 15/205 (7%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N+ FL +L+A L+ QDP + + ++ + + T+ + + Sbjct: 23 NSKMENEDFLKVLLADLQWQDPLQANDITDFIQNTVKLREMEVLNSFQETVELLKETNEA 82 Query: 87 SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAV 146 + L AS LIG V+ G G + L AD VT T+ DK G V Sbjct: 83 NSLLYASGLIGKKVVYEGNQTFVENGR--------SSVSFRLDDNADIVTVTVMDKQGNV 134 Query: 147 VRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 V T L G + F D +G Y V I A+ G+ + + LV+ V Sbjct: 135 VETESFSNLQGGVDYPFEIDNPN-----LTDGYYTVYIEATKDGSPVKSSVKSLGLVESV 189 Query: 206 IRGNSGNTLDLGTYGTTTLDEVRQI 230 +R + G + L L+ + QI Sbjct: 190 VRESDGIKV-LFDDINVDLNSIVQI 213 >UniRef50_B0UIW9 Flagellar hook capping protein n=9 Tax=Alphaproteobacteria RepID=B0UIW9_METS4 Length = 233 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 13/231 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ +++T + G T ++S + A + FLTLL QLKNQ+P +P++ N+ T Q Sbjct: 1 MATGISSTLTGSAGTKTNTASD--SATIAGNFNQFLTLLTTQLKNQNPLDPLDTNQFTQQ 58 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L Q ++V K N L ++ + + A+ L+G V G T GS Sbjct: 59 LVQFASVEQQLKTNDRLDTMVAASKAATASSAAGLVGKTVTADGATAALAGGSAS----- 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + + +AA + TITD+ G VV T L G SFTWDG + G TAP+G+Y Sbjct: 114 ---WTLTAARAATRAVLTITDQKGNVVATRTQ-SLANGGQSFTWDGRSSTGLTAPDGTYT 169 Query: 181 VAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + A++ G + + V S L +G + L V+ I Sbjct: 170 LKVQATDATGQTVSVDTKVTGTIASVDVTGSEPMLSIGGR-SVPLSRVQAI 219 >UniRef50_Q2RRB2 Flagellar hook capping protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRB2_RHORT Length = 229 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 10/213 (4%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 TS+S+ + S + FLT+L QLKNQ+P NP + NE+T QL S V N Sbjct: 15 KATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQLISYSQVEQQILGNQ 74 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 L ++ +N + A +G V+ + + + + ++A V Sbjct: 75 YLENLVLSTNNQTAETALAFVGKEVVYTSDNREFSGEKID--------WKMTVPESAKSV 126 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 + +T+ G V+ + +G ++FTWDG T GS A +GSY + A+ + Sbjct: 127 SFVVTNAKGDVIYSKTETP-ESGAYTFTWDGATTAGSKAVDGSYTLTAKATLADDKTKTI 185 Query: 196 PLQ-FALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 LQ + V V + L L +L + Sbjct: 186 DLQSTSTVAEVDWSSGAAQLKLANGSLISLSNI 218 >UniRef50_B1K3C8 Flagellar hook capping protein n=2 Tax=Burkholderia cepacia complex RepID=B1K3C8_BURCC Length = 241 Score = 124 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 16/230 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + TGV + ++ G+ D+ + F LLVAQ+KNQDP PME N+ +Q A Sbjct: 1 MDIQNNVNNVTGVGGSVATPTAGNGEGDVSAMFTRLLVAQVKNQDPLAPMEANQFVTQFA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V + L + + ++ + + +G V + V G +G Sbjct: 61 QMSQVEAMRTLANLSAATARTQESMLVVTLGSQVGSQVRVRSEKVELGDAVVKG------ 114 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +L+ +A +V +TD+ G R + +G AG F D P G+Y + Sbjct: 115 --SFKLESSASEVGMILTDRGGTEYR-VSLGAKQAGDVDFNIDPAE---HGLPPGNYKLR 168 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSG-NTLDLGTYGTTTLDEVRQII 231 + A +G V +Q V G G L + + G ++ + + Sbjct: 169 VVADSGEKPPVE---LNGDLQSVRLGTDGRVILTIASIGDAEAADITRFL 215 >UniRef50_C7BXG3 Flagellar hook assembly protein FlgD n=5 Tax=Helicobacter RepID=C7BXG3_HELPB Length = 306 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 45/259 (17%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+ + T + +++F+ L + QLKNQDPT PME +++ +Q A Sbjct: 1 MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQ---------------------------------- 88 Q++ V E+ T+ ++ + +++ Sbjct: 61 QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNAL 120 Query: 89 ----SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 +L + ++IG I T V ++ + F ++ + I ++N Sbjct: 121 REVTALNSVSMIGK---IAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENN 177 Query: 145 AVVRTIDIGELT--AGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL--VAQPLQFA 200 +V+TI + + + G +F WDGT G P G+Y + + + + Sbjct: 178 ELVKTIPLKDYSGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRG 237 Query: 201 LVQGVIRGNSGNTLDLGTY 219 V+ VI L +G Sbjct: 238 EVESVIFDKGKPMLRMGEM 256 >UniRef50_A3V1Q8 Possible FlgD protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1Q8_9RHOB Length = 183 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 72/192 (37%), Gaps = 16/192 (8%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L AQ+KNQDP NP+E+ + +QLA S V N L +S QI S ++ +G Sbjct: 1 MLTAQMKNQDPLNPVESADFATQLATFSGVEQAVLTNDLLRGLSLQIGVSGL---ASWVG 57 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 V P G AA + D +GAVV A Sbjct: 58 KEVRAPAPVYFDG---------APVTLHPNPMAAATAGEIVVRDASGAVVHRF---ASPA 105 Query: 158 GVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDL 216 WDG +G P+G Y+ A ++ + G L P++ V V +L Sbjct: 106 TTDPVQWDGVGRNGVVVPDGVYSFAFASLSDGEVLGENPVETYNTVTEVQSFAGQTSLVA 165 Query: 217 GTYGTTTLDEVR 228 + +V Sbjct: 166 HGGIMIRVGDVT 177 >UniRef50_A3V266 Flagellar scaffolding protein FlgD n=3 Tax=Rhodobacterales RepID=A3V266_9RHOB Length = 233 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 18/236 (7%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S+A + G+STT + Q+ FL L+ AQL+NQDP PM+N + +Q+ Sbjct: 7 SLAAQNALLSKLGISTTQDKNAVPKEEL-GQTDFLKLMTAQLQNQDPFAPMDNGDFIAQM 65 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ S+V+GI K++ T+ I+ Q+ + + N +GH VMIPG A E Sbjct: 66 AQFSSVAGISKMSETMSGIADQMGQFRVASSVNYLGHSVMIPGNLARADDNGEIHGA--- 122 Query: 122 TPFGVELQQAADKVTATITDK-NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +EL++A+ D G + T+D+G +G+ F W +GS Sbjct: 123 ----IELERASVDTRIEFLDAMTGESLHTMDMGGQASGLSGFAW---TDVPEQYRDGSRR 175 Query: 181 VA----ISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQI 230 V ++ +G P +A V G N L+ YG + EV + Sbjct: 176 VRLDVLVNYGDGEGVQSLTPNVYAQVIGTANAATNGDGMLETEDYGDVSAAEVLRF 231 >UniRef50_B6JMC9 Flagellar hook assembly protein n=13 Tax=Helicobacter RepID=B6JMC9_HELP2 Length = 339 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 96/259 (37%), Gaps = 45/259 (17%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+ + T + +++F+ L + QLKNQDPT PME +++ +Q A Sbjct: 1 MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQ---------------------------------- 88 Q++ V E+ T+ ++ + +++ Sbjct: 61 QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLEANNAL 120 Query: 89 ----SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 +L + ++IG I T V ++ + F ++ + I ++N Sbjct: 121 REVSALNSVSMIGK---IAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENN 177 Query: 145 AVVRTIDIGELT--AGVHSFTWDGTLTDGSTAPNGSYNVAISASNG--GTQLVAQPLQFA 200 +V+TI + + G +F WDGT G P GSY + + Q + + Sbjct: 178 ELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGSYKIKAEYNLDSHSKQYLQTRIGRG 237 Query: 201 LVQGVIRGNSGNTLDLGTY 219 V+ VI L +G Sbjct: 238 EVESVIFDKGKPMLRMGEM 256 >UniRef50_Q0C5K2 Putative basal-body rod modification protein FlgD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5K2_HYPNA Length = 216 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 13/200 (6%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 +SF+ LL AQ++NQDP +PM++ + QLA S++ + NT L SI+ I + L A Sbjct: 28 NSFIKLLTAQVRNQDPMSPMDSTQFVEQLATFSSLEQLVNSNTALSSIASMIGDLNGLMA 87 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 S +G V + + + F E + A K T T+ D G V T + Sbjct: 88 SQWLGEDVTFASSFMP--------YTGSEATFSYEAPEGATKSTLTVKDSEGNAVWTETL 139 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGS-YNVAISASNGGT-QLVAQPLQFALVQGVIRGNS 210 A F+WDG LT+G TA Y I + + A P V ++ Sbjct: 140 ---DADETVFSWDGQLTNGGTATKDEMYEFVIDYYEDNSFKGTAVPNVITKVTDIVSDGG 196 Query: 211 GNTLDLGTYGTTTLDEVRQI 230 L + T L + R++ Sbjct: 197 TLRLGTASGLTVDLAQARRL 216 >UniRef50_A3VB77 Possible FlgD protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VB77_9RHOB Length = 227 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 13/226 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + T + + S + S + +FL +L Q++NQDP NP+E+++ QLA Sbjct: 6 TSTTVSYGASAASGAASEDPKSKSAISSDFETFLKMLTVQMENQDPLNPIESSDYAVQLA 65 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 S V + N L ++ Q+ + +G V A E V Sbjct: 66 TFSGVEQQVQTNDLLKALQTQLGVMSMSDLAGWVGMEARA---GVSAQFDMEPITVIPHP 122 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 P G A + + + G++V ++ + S W G +GS P G Y+ Sbjct: 123 PTG------ATQTFMVVKNAAGSIVDRVEF---SPSDTSVQWAGLDDNGSLFPPGEYSFT 173 Query: 183 ISASNGGTQLVAQPLQ-FALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + N + +P+ ++ V + L L T EV Sbjct: 174 LQSYNTRGLMSEEPMSVYSEVVEAKVVSGQTILILETGDEIPAAEV 219 >UniRef50_B6IT44 Basal-body rod modification protein FlgD, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IT44_RHOCS Length = 309 Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 13/187 (6%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 +FL LL AQLKNQDP P E +E T+QL Q S V N+ L +++G + Q+ A Sbjct: 35 ETFLQLLTAQLKNQDPLQPQETSEFTNQLVQFSQVEQQISTNSKLDNLTGVVQQGQATVA 94 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 IG V + + + G T ++ T I+DK+G +V T + Sbjct: 95 LQYIGKTVELEPSGIPLLPGG--------TTVSYDIDGEVRSATLVISDKDGNIVNTQSV 146 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF----ALVQGVIRG 208 ++ G ++ WDG G G Y +I S G V ++ VI Sbjct: 147 -QVRPGRNTAFWDGNDATGKAMTPGFYTASIQFSGGNDSQVVLTNRYVPYSGEAVSVIYD 205 Query: 209 NSGNTLD 215 + Sbjct: 206 TGKTVTN 212 Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 3/106 (2%) Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 + + + + G + + +G TWDG G +G Y++ + + Sbjct: 204 YDTGKTVTNAKMVVRNMEGETIYEQAVSG-ASGAQRVTWDGKDKKGKAVASGYYDINVES 262 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + G + + GV + + +G+ + VR I Sbjct: 263 TEAG-PGTIRTSVMNRISGVDMSSGETNVLIGSL-PVPMSNVRAIY 306 >UniRef50_C8WBV8 Flagellar hook capping protein n=4 Tax=Zymomonas mobilis RepID=C8WBV8_ZYMMN Length = 230 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 10/208 (4%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 AA + FLTLL QLK QDP +P++N ++ +Q+AQ S+V+GI +LNTT+ SI Sbjct: 31 KDPTAALSSTDFLTLLTTQLKYQDPDSPVDNTQMAAQMAQFSSVAGINQLNTTVSSIQSD 90 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 + NS+ SN IG ++ + G+ G V+L AA V ++ D Sbjct: 91 VSNSRLGNVSNWIGKAGLVSSNIATSIDGTFAGQ--------VKLDSAASDVKISLADSA 142 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-ALV 202 G VV + D G +AG SF++ G + G+T +G V ++A+N V+ ++ Sbjct: 143 GKVVYSKDYGSQSAGDVSFSFSGNDSSGNTV-SGPLTVKVNATNSSGGSVSNSTSTWTMI 201 Query: 203 QGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V SG T + + GT ++ I Sbjct: 202 DAVNSPASGTTQIVTSLGTYDPSDITSI 229 >UniRef50_A6Q2N2 Flagellar hook capping protein FlgD n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2N2_NITSB Length = 220 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 19/208 (9%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 + + FL +L+A + QDP + + ++ + + T++ +++ Sbjct: 26 QSKMDKEGFLKVLLANFQFQDPFEAQDIAKFIDNTVKLRELEVLNNFETSVNTLAN--GT 83 Query: 87 SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAV 146 Q L A+NLIG V+ G G T V+L + + + + D+NG V Sbjct: 84 QQLLSAANLIGKKVVYTGNETFVENGK--------TDVSVKLDEDVNYLALYLYDENGNV 135 Query: 147 VRTIDIGEL-TAGVHS-FTWDGTLTDGSTAPNGSYNVAISASNGGTQL--VAQPLQFALV 202 V ++ E AG F + + P+G YNV + A NG ++ LV Sbjct: 136 VYQKELTETIPAGTSKRFEI-----EDESIPDGVYNVGVVAKNGEEEISQAEIIHSTGLV 190 Query: 203 QGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 GV + S L + + + L++V I Sbjct: 191 AGVEKEGSEIVLSVNSGQSVKLNDVYSI 218 >UniRef50_A3SKB3 Possible FlgD protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKB3_9RHOB Length = 227 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 87/228 (38%), Gaps = 14/228 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNA-ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 + +T +G ++T + S + S A + +FL +L Q++NQDP NP+E + Q Sbjct: 5 TSTTSTGQAAQSGQASTQAESDSSSRAISADFETFLKMLTVQMRNQDPLNPVEGTDFAVQ 64 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA STV + N LG++ Q+ Q +G G Sbjct: 65 LATFSTVEQQVRTNDLLGALGNQLGGLGFGQLLGWVGMEARTTAPVAFDG---------A 115 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + AD+ +T+ G V+ + A TW DG PNG Y Sbjct: 116 PVDLVLPEIALADRAEMVVTNARGVEVQRQTV---PASGGELTWVAVDEDGDPLPNGVYT 172 Query: 181 VAISASNGGTQLVAQPLQF-ALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + L +QP++ A + + G L L + +EV Sbjct: 173 LTVEGYASDALLGSQPVEHRADIVEARQTAQGTRLLLSSGQEIAAEEV 220 >UniRef50_A5L6P4 Flagellar basal body rod modification protein D n=2 Tax=Vibrionales RepID=A5L6P4_9GAMM Length = 222 Score = 117 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 15/229 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ N ++T + ++A+ L++ F+TL+VAQ++NQDP NP + E +Q Sbjct: 1 MTTISGAAQVNNIESASTMTPQDNPNSASALKNEFITLMVAQIENQDPLNPTDGTEYVAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V E L + S +DN Q L + LI V + + A + Sbjct: 61 LAQFSQVESTENLVQLTQNNSTMLDNLQVLSTAALIDKTVTVKSERLSAAGVDQHTGY-- 118 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +ELQ ++ V + D G V+++++G +AG +T D + +G Y Sbjct: 119 -----IELQAPSNTVMLELVDSLGN-VKSLNLGPNSAGRVDYTLDAQ----AMGLSGQYQ 168 Query: 181 VAISASNGGTQLVAQPLQFALVQGVI--RGNSGNTLDLGTYGTTTLDEV 227 + I + G Q V+ V + L + G +V Sbjct: 169 MRIK-LDSGQDYQPSIYQHGQVEHVTTPLIGGTSHLQVKGVGMVAFYDV 216 >UniRef50_C1A556 Putative flagellar basal-body rod modification protein FlgD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A556_GEMAT Length = 267 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 88/238 (36%), Gaps = 18/238 (7%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 P + T N + FL +LVAQLKNQDP NPM+ ++ +QLAQ STV Sbjct: 30 PPVGPAEPSAPRDLPTNPNGM-GRDEFLKMLVAQLKNQDPLNPMDGKDMAAQLAQFSTVE 88 Query: 69 GIEKLNTTLGSI-------------SGQIDNSQSLQASNLI-GHGVMIP-GTTVLAGTGS 113 + K+N +L + + N ++ + + LI G M G T + + Sbjct: 89 QLLKMNESLDAQKSATAEMKDAIVSLEETQNERADELAQLIEGQMAMATVGKTGVTPGNN 148 Query: 114 EEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGST 173 V+ + T+ + G V +G + G SF G Sbjct: 149 AWVDKEGNGTLVVDAGSLSGTGRITMINSKGEAVGQAIVGAVKPGQASFN-VGDYEFDPP 207 Query: 174 APNGSYNVAIS-ASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G Y A +GG A + G+ N L +G + + ++ QI Sbjct: 208 LEPGQYTYKFDVAKDGGLYQSATTYTAGRITGMKYENGNPILIIGDSLSVPMSQLTQI 265 >UniRef50_B3QDF7 Flagellar hook capping protein n=9 Tax=Bradyrhizobiaceae RepID=B3QDF7_RHOPT Length = 222 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 11/187 (5%) Query: 34 SFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQAS 93 FL+LL+++L+NQDP N + +QL + S +++N+++ S++ + +L + Sbjct: 32 DFLSLLISELQNQDPLNATSTTDFINQLTSYANFSQQQEINSSMTSLANSFSSLVTLNSV 91 Query: 94 NLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIG 153 N IGH V T GS FG L AA V+ +I D +G V + G Sbjct: 92 NYIGHTVEAKTDTATLTGGSAT--------FGYTLSAAASDVSISIKDSSGNTVWSGT-G 142 Query: 154 ELTAGVHSFTWDGTLTDGSTAPN-GSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSG 211 AG +S TWDG + G+ + G Y +++SA++ G + V G+ +S Sbjct: 143 SGNAGSNSLTWDGKNSSGTQLADGGQYTISVSATDSAGNSVYKYSTVSGTVTGIDTSSST 202 Query: 212 NTLDLGT 218 L + Sbjct: 203 PALLVNG 209 >UniRef50_A3W5K4 Possible FlgD protein n=2 Tax=Roseovarius RepID=A3W5K4_9RHOB Length = 230 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 75/216 (34%), Gaps = 14/216 (6%) Query: 14 GVSTTSSSSLTGSNA-ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 G +T+ +S + + +FL +L QL+NQDP NP+E+++ QLA STV Sbjct: 19 GATTSDNSLEKATGGFSTDFETFLKMLTTQLRNQDPLNPIESSDFAVQLATFSTVEQQVL 78 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 N L + +I Q S IG + +G + A Sbjct: 79 TNDLLTDLGARIGAQGLSQVSGWIGMEALSELPVTFSGE---------PVSLLATVDPQA 129 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL 192 + T+ G +V I + W G G +G Y +++ + + Sbjct: 130 EAAEIVATNAQGIIVNRQPIPTTSG---QVLWAGLDPIGLPLAHGDYALSVHSLVNDDII 186 Query: 193 VA-QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + L L + + D+V Sbjct: 187 ARHNARVPSRIVEAQFEAGEAVLLLESGQRISPDQV 222 >UniRef50_D0Y261 Flagellar hook capping protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y261_9CAUL Length = 242 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 13/207 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ AV++ + T+ + + SN +FL LL QLKNQDP +P + ++T Q Sbjct: 1 MATAVSSQNTTSVLDRINNGRTSMASNT----ETFLKLLTTQLKNQDPLSPTDTTQMTQQ 56 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 + Q++ V N L ++ G + + ++IG V + G Sbjct: 57 ITQMTGVEQQLVTNDLLAALVGMNTGTGLTEGVSMIGKQVTATTDSSTLKGGK------- 109 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-GSY 179 F + +T I + G VVRT+ + +G H+ TWDG G+ PN G Y Sbjct: 110 -AAFSWTQAGGSTSLTVEIKNAAGKVVRTLKPDDQKSGDHTLTWDGKDDTGAQLPNGGVY 168 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVI 206 ++ A + + +GV+ Sbjct: 169 TASVKAVGADNKDIKVTNVKGRTEGVV 195 >UniRef50_C5EXK1 Flagellar basal body rod modification protein n=3 Tax=Helicobacter RepID=C5EXK1_9HELI Length = 379 Score = 109 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 90/249 (36%), Gaps = 47/249 (18%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N +F+ L + QLKNQDPT PME E+ +Q AQ++ V ++ + ++ + + Sbjct: 114 NNGLGTEAFMRLFLEQLKNQDPTAPMETQEILTQTAQLTQVEAQTQMKNAMEQMTTTMQS 173 Query: 87 SQ-----------------------------SLQASNLIG--HGVMIPGTTVLAGTGSEE 115 Q S+Q S++IG + V + G + + Sbjct: 174 MQETNEKTIEAQQKLIKTQEKMLETMGVLAGSIQDSSIIGGYNTVGMIGNIAETPYTALK 233 Query: 116 GAVTTTTPFGVELQQAAD----KVTATITDKNGAVVRTIDIGELT----------AGVHS 161 F + + D + TITDK+ V+R ID+ G Sbjct: 234 VEKNEAIDFELYFDEPIDPTKGQPKITITDKDNNVIREIDLAAQDEEGNYIYLNKEGYVE 293 Query: 162 FTWDGTLTDGSTAPNGSYNVAISAS--NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTY 219 F WD + G NG Y V + + Q L VQ ++ + LG + Sbjct: 294 FEWDTRDSKGKFVANGDYTVKAEYNLDSATNQYKETQLGRGEVQSILFDAGVPYVKLGDH 353 Query: 220 GTTTLDEVR 228 T + V Sbjct: 354 LTVPIIYVT 362 >UniRef50_Q7M8B1 FLAGELLAR BIOSYNTHESIS PROTEIN n=1 Tax=Wolinella succinogenes RepID=Q7M8B1_WOLSU Length = 270 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 91/248 (36%), Gaps = 39/248 (15%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS--- 79 +N + +F+ L + QLK+QDPT+PME ++ Q A ++ + E++ TL S Sbjct: 20 AQNNNGTLDKDAFMRLFLEQLKSQDPTSPMETEKILEQTAMLTQLEQQEEMKKTLSSMTD 79 Query: 80 -------------------------ISGQIDNSQS-------LQASNLIGHGVMIPGTTV 107 + +DNS S L N +G + T V Sbjct: 80 TMKTMTDTSTKLAELQETMSNTLKDLGTSLDNSTSVTTFLAQLAGYNSVGMIGKVAETNV 139 Query: 108 LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELT--AGVHSFTWD 165 + AV F + + I ++ +++ +D+ G +F WD Sbjct: 140 TGLNITSNDAVKFDLYFDEPIDASKGTPMLKIYNEKNELIKEVDLSAYNGQKGYVTFEWD 199 Query: 166 GTLTDGSTAPNGSYNVAISAS--NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTT 223 + GS NG+YNV + + + + VQ ++ NS + LG Sbjct: 200 TKDSGGSYVANGAYNVTAEYNLDSATNKYKETRIGRGEVQSILYENSVPYVKLGDNLILP 259 Query: 224 LDEVRQII 231 + V Q Sbjct: 260 IGNVTQFY 267 >UniRef50_A3VS68 Possible FlgD protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS68_9PROT Length = 202 Score = 107 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 86/211 (40%), Gaps = 21/211 (9%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 PT+ + ++++ + A +FL LL AQ+KNQDP P+++ + QLA S+ Sbjct: 2 EISPTSAQSAASAANQKATQSLATDLDAFLNLLTAQMKNQDPFAPIDSTQFVEQLATFSS 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + + N L ++ G + ++ Q +++IG + G+ E ++ Sbjct: 62 LEQQVQTNKYLETMMGLLQSTLGGQQTDVIGAQI-----------GASEITISGAFDPLP 110 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + + + + + G VV ++W+G +G+ A G+Y+ I Sbjct: 111 IVSGSDAEGALVVRNAQGDVVFR------GPRADEWSWNGQTNEGTLAAPGTYSFEIET- 163 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLG 217 V V VI +G + +G Sbjct: 164 ---DSTVLDARALGTVDRVITDTNGQVVGIG 191 >UniRef50_Q07ST8 Flagellar hook capping protein n=14 Tax=Bradyrhizobiaceae RepID=Q07ST8_RHOP5 Length = 243 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 48 PTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV 107 P +P++ N+ T QL Q + V K N+ L ++ +Q+ QA N +G ++ G T Sbjct: 54 PLDPLDTNQFTQQLVQFAGVEQQLKSNSQLEALVKLQTGAQATQALNFVGATAIVDGATT 113 Query: 108 LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGT 167 G +G + + V +IT+ G V + + +F WDG Sbjct: 114 KLAGGKAT--------WGFNVPKD-STVKVSITNATGQTVYSGNFAMKAGDHQAFVWDGK 164 Query: 168 LTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDE 226 DGS G Y + ++ G + V + L + T T+D+ Sbjct: 165 GKDGSQWAAGDYKLTAVGTDSQGNAVTVSTEIIGQVDSADLSANPPLLSIAG-QTFTVDQ 223 Query: 227 VRQII 231 +++I+ Sbjct: 224 IKKIV 228 >UniRef50_Q7NXC4 Basal-body rod modification protein FlgD n=1 Tax=Chromobacterium violaceum RepID=Q7NXC4_CHRVO Length = 225 Score = 105 bits (263), Expect = 9e-22, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 83/220 (37%), Gaps = 16/220 (7%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 G + + + A F+TLL+AQ++NQ P +P + ++ SQLAQ+S + Sbjct: 14 SNQQGGEQKVAPAAGKNGAQPGNDMFMTLLLAQIRNQSPLDPADPSQFVSQLAQMSQMQS 73 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 + + L S + Q + +G V++ + + E + L Sbjct: 74 TQDMLKQLQSQGAMLRELQGVALGAQVGKPVLLQTDRIRSDGQGE-------LNGRLTLS 126 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 + T +TD G R I++G+ AG F G+Y V +S ++G Sbjct: 127 GQEESATLILTDAAGQRTR-IELGKREAGASDFKIKLADY---HLAAGNYQVELSTASGS 182 Query: 190 TQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEV 227 L A V GV +G L L G V Sbjct: 183 KGLFE---LKAEVSGVRLPVNGGEPVLSLAGLGDFPASSV 219 >UniRef50_Q2CDG3 Possible FlgD protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CDG3_9RHOB Length = 183 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 70/195 (35%), Gaps = 21/195 (10%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L QLKNQDP NP+E+ + QLA S V N L S+S Q+ + Q ++ +G Sbjct: 1 MLTVQLKNQDPLNPVESADYAVQLATFSQVEQQVLTNDLLTSLSEQLGAAGLGQVADWVG 60 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 + GT V+ + AD + D+NG + + A Sbjct: 61 REARVAAAVSYVGT---------AIDVVVKPAEGADLAYIVLRDENGIELERQ---PVEA 108 Query: 158 GVHSFTWD---GTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ-FALVQGVIRGNSGNT 213 W G G + I + G L P + +A V+ V + Sbjct: 109 EEQILGWHPAPGNDVSGRRL-----SFEIESFAAGESLGTVPAEVYASVREVRMRDGTAH 163 Query: 214 LDLGTYGTTTLDEVR 228 + L + EV Sbjct: 164 VVLSGGASAPASEVT 178 >UniRef50_A5FUQ9 Flagellar hook capping protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUQ9_ACICJ Length = 253 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 10/198 (5%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 + FLT+L QL+NQDPT+PM +++ TS+L Q S V N +L + QA Sbjct: 64 NDFLTMLTTQLQNQDPTSPMSSSQFTSELVQFSQVEQQISTNQSLTQLLQLTQAGDLTQA 123 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 S+++G V + + G+ T T + V + + G + + Sbjct: 124 SSMLGSKVTATSSQLPLQNGTGTLNFTAPT---------SGPVAIAVYNGAGQQILDTSM 174 Query: 153 GELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGN 212 TAG +S+TW+G G+T P+G+Y VA+ P + S + Sbjct: 175 NA-TAGSNSWTWNGKDASGTTVPDGAYKVAVVEGGANGSTTTLPFTVTGTATGVTSGSNS 233 Query: 213 TLDLGTYGTTTLDEVRQI 230 + V + Sbjct: 234 VSLQMGGVSVPFTAVTNV 251 >UniRef50_P96970 FlgD (Fragment) n=1 Tax=Proteus mirabilis RepID=P96970_PROMI Length = 182 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 94/179 (52%), Gaps = 35/179 (19%) Query: 9 DPTNTGVSTTSSSSLTGSN-AADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 NT + SS T + D++ +FLTLL+ Q++NQDPTNPM+NNELTSQLAQISTV Sbjct: 4 PTDNTIIGEAPSSYHTKKGGSDDIKGNFLTLLITQMQNQDPTNPMQNNELTSQLAQISTV 63 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVL------------------- 108 GIE LN T+ +I GQID SQ+L+A++L+ H VMI G + Sbjct: 64 EGIETLNKTVNTIVGQIDQSQALRATSLVNHMVMIAGNDIYVDKSNNGENAGSDADTDID 123 Query: 109 ---------------AGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 A T + + FG E D +T ITD +GA VRTI++ Sbjct: 124 TDKTPDTKLDPLLRSADTPDPDNENIFASAFGFESFSPIDTLTVNITDSSGAKVRTIEM 182 >UniRef50_B9Z4U7 Flagellar basal body rod modification protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4U7_9NEIS Length = 226 Score = 103 bits (256), Expect = 6e-21, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 17/233 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+++ + + + + + G + + F+TLL+AQ+KNQ+P +P + ++ +Q Sbjct: 1 MTVSNSLLNDSTASSQGATPVASNGQSQSSGSDMFMTLLMAQIKNQNPLDPADPSQFVNQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L Q++ + + + L + + Q L N +G+ V++ TV G +T Sbjct: 61 LVQMNQMQTSLGMLSQLKDNAVLLRELQGLGLGNQVGNSVLVQSNTVQLDGTPLSGRLT- 119 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 L A ++VT +T +G ID+G AG +F+ + GSY Sbjct: 120 -------LSGAENQVTLQLTGADGKQ-HPIDLGAQPAGEVAFSVNPADYG---LAAGSYA 168 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQII 231 ++++ ++ T ++ A+VQGV L L G V +++ Sbjct: 169 LSVTTASRATPMLE---LAAVVQGVRLPVQGGEPMLTLSGLGDVPASSVSRLL 218 >UniRef50_B2V6Q5 Flagellar hook capping protein n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Q5_SULSY Length = 218 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 90/225 (40%), Gaps = 16/225 (7%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 TT P + + N+ Q+ FL +L+A LK QDP N + ++ ++ Sbjct: 7 TTFPDSATSNKPKVVDANYDNSKMSQNDFLKVLLADLKWQDPMNAKDISDFIDNSVKLRQ 66 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + ++ + + ++S + + AS++IG V G G Sbjct: 67 MESLDSIQKLVDTLSTF--TNSIVNASSMIGKKVKYEGNQTYISQGQSN--------IEF 116 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +L A V ++ D NG +V + L G ++ + +G Y V +SA Sbjct: 117 KLNAPAQNVKVSLVDSNGNIVEQKEFTNLN-GNTTY---PLSIENQNLTDGYYKVLVSAK 172 Query: 187 N-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + G + A +V G+++ NS + + +LD++ +I Sbjct: 173 DSAGNDVQATIYSTGIVNGILKDNSSLSAKINNV-NVSLDKILEI 216 >UniRef50_D2TJ83 Lateral flagellar rod protein n=2 Tax=Citrobacter RepID=D2TJ83_CITRO Length = 270 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 15/202 (7%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 +FLTL VA+++NQDPT+P + + QL+ ++ V+ +E+++ + + + N Q + Sbjct: 65 ETFLTLFVAEIQNQDPTDPADPTDYIDQLSSMAQVAMMEEMSVQANTNAVLMSNIQVMAL 124 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGA--VVRTI 150 NL+G +M+ TT+ + EG VT L A V D G V + Sbjct: 125 GNLVGDDIMVQTTTLQVSDSAIEGRVT--------LDDACTTVDLHFIDAAGDDYTVSLL 176 Query: 151 DIG--ELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG 208 G + G F + P G Y++++ + G ++ + + Sbjct: 177 PEGGTSVGPGQVDFDINPADYG---IPPGDYDLSVVTNTGEEEVPVEVSGEVKDVRIPLD 233 Query: 209 NSGNTLDLGTYGTTTLDEVRQI 230 S L++ G + Q Sbjct: 234 GSTPVLNIDGVGEVPFTMISQF 255 >UniRef50_Q9KA39 Flagellar hook assembly protein n=2 Tax=Bacillus RepID=Q9KA39_BACHD Length = 171 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 50/99 (50%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TTT+ + + ++ + FL +L+AQL+ QDP NPM++ E +Q+AQ Sbjct: 1 MTTTNGIDGSYYYENRPKEQSNSGILGKDDFLRILIAQLQYQDPLNPMDDREFIAQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIP 103 S++ + +N+ + Q + +Q S LIG V Sbjct: 61 SSLEQMTNMNSAIQQFVKQQTSQTLVQHSELIGKRVTWK 99 >UniRef50_A3NFX4 Flagellar hook capping protein n=8 Tax=pseudomallei group RepID=A3NFX4_BURP6 Length = 241 Score = 100 bits (248), Expect = 5e-20, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 16/217 (7%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + + S + A F LL AQ++NQ+P PM+ ++ +Q+ + + Sbjct: 27 AGQHTPSPYANGANSPTDLFAKLLAAQIQNQNPLEPMDASQFVTQIMMGQQTEALGVVAN 86 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 + + +++ + + +G VM+ ++ + + + L A V Sbjct: 87 LTQNSAALMESMLVVSLGSQVGTQVMVRTDSLELKDDTRDA--------RIVLDNAESDV 138 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ 195 T +TD G I +G G +FT D P G Y + + ++G A Sbjct: 139 TVVLTDSAGNS-HRIALGAQAKGDVNFTIDPEELG---LPAGQYKIRVETASGAK---AG 191 Query: 196 PLQFALVQGVIRGNSG-NTLDLGTYGTTTLDEVRQII 231 ++ V G L + G + + Sbjct: 192 VEIEGTLENVRLAADGKVILHVAGVGDVETSSISSFL 228 >UniRef50_UPI00016996F7 flagellar basal body rod modification protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996F7 Length = 115 Score = 100 bits (248), Expect = 5e-20, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 118 VTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177 + T +EL A VT IT+ NGA+VR +++G G +F+WDG G A +G Sbjct: 1 MATPLKGSIELPSNASNVTLRITNSNGALVRELELGSHEGGALAFSWDGYDDQGDFAGSG 60 Query: 178 SYNVAISASNGGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQII 231 Y V A+ G ++ A V+ V G+ G L+L G ++++V++I Sbjct: 61 LYQVTAQATVDGAEMAPAVHVAAEVESVSLGGSGGVRLNLVGLGQVSMNDVKEIY 115 >UniRef50_A8VS08 Succinyl-CoA synthetase, alpha subunit n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS08_9BACI Length = 161 Score = 98.6 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 5/131 (3%) Query: 22 SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 + ++ + +FL LL+ QL+NQDP +PME+ E SQ+A S++ + +N + Sbjct: 23 AKGTGDSEMGKDAFLKLLITQLQNQDPLDPMEDKEFISQMANFSSLEQMTNMNENMNKFL 82 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 SQ S++IG + V G + + V+ + ATI Sbjct: 83 ESQQQSQFFSHSDMIGKQIEWQ-EEVKNENGDKRMETMSAIVQAVKFKDG----IATILT 137 Query: 142 KNGAVVRTIDI 152 ++G + DI Sbjct: 138 ESGKELSVDDI 148 >UniRef50_Q2NR91 Putative flagellar hook formation protein FlgD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NR91_SODGM Length = 138 Score = 97.9 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 61/130 (46%), Positives = 90/130 (69%), Gaps = 5/130 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+AV + ++ + +++SS ++ADLQ++FLTLLVAQL+NQDPTNP++N ELT+Q Sbjct: 1 MSLAVNLNETASSASAASTTSSSGSESSADLQNNFLTLLVAQLRNQDPTNPLDNAELTTQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQIS +S IE LNT LGSI +SQ+LQA+ L+GHGVM+ G+ + + + E ++ Sbjct: 61 LAQISILSSIENLNTMLGSI-----SSQNLQATTLVGHGVMVDGSGAVYYSRNGEFSLNA 115 Query: 121 TTPFGVELQQ 130 G + Q Sbjct: 116 DRHGGADHPQ 125 >UniRef50_Q5WFR3 Flagellar basal-body rod modification protein FlgD n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFR3_BACSK Length = 144 Score = 97.5 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 52/100 (52%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 ++S + N A Q +FL LL+ QL+NQDP+NP+E+ E +QLA S + + KLN+T Sbjct: 11 SSSQNQQRQPNNALGQDAFLKLLITQLQNQDPSNPIEDREFIAQLATFSQLEQLTKLNST 70 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEG 116 + + + + Q + S LIG V + G Sbjct: 71 MEYMYYEQKSQQLMALSELIGKSVEWLNEKEKVEQATVTG 110 >UniRef50_D2LSH3 Flagellar hook capping protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSH3_BACS4 Length = 149 Score = 97.5 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T + +S + + +FL +L+ QL+NQDP NPME+ E +Q+AQ Sbjct: 1 MPNTINDSLYLSDFQKQQKARNTGDLDKDAFLRILITQLQNQDPLNPMEDKEFIAQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 +++ + +NT L N Q + S LIG V V GS+ V Sbjct: 61 TSLEQMTNMNTNLQKFLDSHQN-QFVSHSELIGKEVQWERERV-NEDGSKRMEVVEGVVT 118 Query: 125 GVELQQAADKVTA----TITDKNGAVVRT 149 V+ Q + + T++ K+ V+++ Sbjct: 119 SVKFQNGSASLVIDDQHTVSTKDIQVIKS 147 >UniRef50_A6CQ95 Flagellar basal body rod modification protein D n=3 Tax=Bacillus RepID=A6CQ95_9BACI Length = 211 Score = 96.7 bits (239), Expect = 6e-19, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 20/228 (8%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 ++ T +N +S+ G + F+ +L+ QL+NQDP NPM++ + +Q+A Sbjct: 1 MSNTINSNLLLSSLQQKQREGGKDVLGKDDFMKILMTQLQNQDPLNPMQDKDFIAQMATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 ST+ I L+ ++ + + + + +G + T S EG Sbjct: 61 STLEQITNLSKSMETFIEAQGQNNLIAYNQFVGKEI-----TWHKLEESSEGRTEIKEGK 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV--A 182 G+ +NG ++ ++ ++ HS+ G++ N S + Sbjct: 116 GIVSSVRFQDNEVQFIMENGTILAPGNVSQVNHSDHSY-------GGNSLVNASSLIGRT 168 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + N G +L + V V + + L D + +I Sbjct: 169 VYWKNEGEEL------HSAVTSVSKKDGSLWFHLENGDKIKEDSIMKI 210 >UniRef50_UPI0001695594 Flagellar hook capping protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001695594 Length = 197 Score = 95.6 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + V T D + + + + +G N++ + FL +L+AQL NQ+P +PM + E +Q+ Sbjct: 13 NFEVKTRDKLSVNQKSETKTMRSGGNSSLGKDDFLKILIAQLVNQNPMDPMNDKEFIAQM 72 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 AQ + V + + + + + AS LIG V +++G V Sbjct: 73 AQFTAVEQMTFMAEQMYDLRQSLGG-----ASTLIGKHVSYLTVNEKQEVITKQGVVDA 126 >UniRef50_A3IF23 Flagellar basal body rod modification protein D n=2 Tax=Bacillaceae RepID=A3IF23_9BACI Length = 229 Score = 95.2 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 50/99 (50%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S A T+ + S + N+ + +FL LL+ QL++QDPTNPM + E SQ+ Sbjct: 7 SKATNTSITDDLYYSNYRKPTKQTGNSELGKDAFLQLLITQLQHQDPTNPMNDREFISQM 66 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 AQ S++ ++ + + S+ +Q + + +G V Sbjct: 67 AQFSSLEQMQNMTKAVESLLASQQQTQMMNYATFVGKEV 105 >UniRef50_B1YI97 Flagellar hook capping protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YI97_EXIS2 Length = 156 Score = 93.3 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 1/153 (0%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T + + + S+ + + F+ +L+AQL NQDPT PME+ E SQ+AQ Sbjct: 1 MTDSIKNDASSYQLPDKTKVPSSNSMDKDMFMKILIAQLSNQDPTAPMEDKEFISQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S++ ++ + + ++ + + SNLIG+ V TV + T Sbjct: 61 SSLEQMQSIGKGIETMMLNQHAAALMNYSNLIGNKVSYESETVTKDATGADVTSTVKETA 120 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 V L D V NG V D+ E+ Sbjct: 121 NV-LSVKRDGVDILAELSNGKSVSVYDLTEIKP 152 >UniRef50_Q5DY16 Lateral flagellar rod protein (FlgD-like) n=8 Tax=Enterobacteriaceae RepID=Q5DY16_ECOLX Length = 234 Score = 92.9 bits (229), Expect = 8e-18, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 19/235 (8%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQ-SSFLTLLVAQLKNQDPTNPMENNELTS 59 +++ + PT T S ++S T S++ +FLTL VA+++NQDPT + E Sbjct: 4 LALNAQSPQPTATAESNNVAASDTTSSSDSSPVDTFLTLFVAEIQNQDPT---DATEYID 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 QL+ ++ V+ +E+++ + + + N Q + NL+G +M+ T + + G T Sbjct: 61 QLSSMAQVAMMEEMSVQANTNAVLMSNIQVMALGNLVGDDIMVQTTALQVSDQTINGRAT 120 Query: 120 TTTPFGVELQQAADKVTATITDKNGA--VVRTIDIGELT--AGVHSFTWDGTLTDGSTAP 175 L A TD G V I G + G F+ + P Sbjct: 121 --------LDDACTTADLHFTDAAGDDYTVSLIPQGSSSVGPGQVDFSINPADYG---IP 169 Query: 176 NGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G Y+V++ + G ++ + + S L++ G + Q Sbjct: 170 PGDYDVSVVTNTGEEEVPIEVSGEVEDVRIPLDGSSPVLNVAGVGEVPFTMISQF 224 >UniRef50_B0K1S4 Flagellar hook capping protein n=9 Tax=Thermoanaerobacter RepID=B0K1S4_THEPX Length = 131 Score = 92.1 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 10/93 (10%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 TN V++ ++ ++ N+ + FL LLV QLKNQDP NPM++ E +QLAQ ST+ + Sbjct: 5 TNYNVTSIYNNRVSTLNSQLGKDDFLKLLVTQLKNQDPLNPMDDREFIAQLAQFSTLEQM 64 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIP 103 + +N+++ +I A NLIG + Sbjct: 65 QNMNSSINAIR----------AINLIGKNIYAT 87 >UniRef50_C1PG44 Flagellar hook capping protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PG44_BACCO Length = 215 Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 + DP+ + +++S + + +FL +L+AQL+NQDPT PM++ + SQ+AQ S Sbjct: 5 SIIDPSLLLSNQNTATSTRTGSKTLDKDAFLKILIAQLQNQDPTKPMDDTQFVSQMAQFS 64 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 ++ + L + ++ SQ + + IG V T A G+ T T G Sbjct: 65 SLEQMTNLKNDIDNLIKLSQQSQQIAYTQYIGRTVSWE-KTETADDGTASVKSGTGTITG 123 Query: 126 VELQQAADKVTATITDKN 143 + + VT T+ D Sbjct: 124 ISFGDD-NAVTFTLDDGT 140 >UniRef50_B8CYR3 Flagellar hook capping protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYR3_HALOH Length = 142 Score = 90.6 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 4/139 (2%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A T + T S + + +F LL+ QL++QDP PME+ E +Q+A Sbjct: 4 LARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIAQMA 63 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVM-IPGTTVLAGTGSEEGAVTTT 121 + S++ + +N L + + Q + LIG V + + +G V + Sbjct: 64 EFSSLEQMANMNENLSTF---MRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVVYES 120 Query: 122 TPFGVELQQAADKVTATIT 140 L TIT Sbjct: 121 GTLYAHLDNDVKIPVDTIT 139 >UniRef50_C4L629 Flagellar hook capping protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L629_EXISA Length = 142 Score = 90.2 bits (222), Expect = 6e-17, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 2/138 (1%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T+ P + S +N D + F+ LL+AQ+ NQDP +PME+ E +Q+AQ Sbjct: 1 MTSIQPKTNDFTLPDQSLPKATNQYD-KDMFMKLLLAQIANQDPMSPMEDKEFIAQMAQF 59 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGT-GSEEGAVTTTTP 123 S++ ++ ++ L S+ S + S++IG + T T GS + Sbjct: 60 SSLEQMQAISKQLDSVLVDRHMSSISEYSSMIGKTIDFTSETSEETTKGSGRVVSISRND 119 Query: 124 FGVELQQAADKVTATITD 141 + D + ++ D Sbjct: 120 LTGYMADLEDGTSVSVYD 137 >UniRef50_A9HHB6 Flagellar hook capping protein n=2 Tax=Acetobacteraceae RepID=A9HHB6_GLUDA Length = 258 Score = 90.2 bits (222), Expect = 6e-17, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 44 KNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIP 103 +NQDP++PM ++ T +LAQ + V + NT L ++ + SQ ++L+G Sbjct: 64 QNQDPSSPMSSDTFTQELAQFAGVEQQVQTNTNLSTLISLNEESQLNSDASLVGKTATAD 123 Query: 104 GTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFT 163 TT+ GS + T T A + V + + +G VV+ + + +G +++T Sbjct: 124 STTLPLQNGSASLSFTGT---------AGETVAIAVANSSGTVVKDV-VATADSGTNTWT 173 Query: 164 WDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ-FALVQGVIRGNSGNTLDLGTYGTT 222 WDGT G+ +G+Y+VA+ N A P + GV +G++ ++G+ Sbjct: 174 WDGTDNSGNQLTDGAYSVAVETINSSGTTSAVPFTVSGTITGVTKGSTDMEAEMGS-ADI 232 Query: 223 TLDEVR 228 + ++ Sbjct: 233 PMADIT 238 >UniRef50_A4J759 Flagellar hook capping protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J759_DESRM Length = 185 Score = 90.2 bits (222), Expect = 6e-17, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 72/175 (41%), Gaps = 15/175 (8%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 + TN + S + +FL +++AQL+ QDP++PM++++ Q+A +T Sbjct: 2 EVNQTNNSDLYYENRKTKESVKTLDKDAFLQIMIAQLRYQDPSSPMDSSKFIEQMAMFTT 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV--MIPGTTVLAGTGSEEGAVTTTTPF 124 + + LNT + + + + AS+LIG V + V+ + + Sbjct: 62 LEQMTNLNTNMERLYHLQELN---HASSLIGKRVNLIAEEEQVIGEVERVTLGENSVNIW 118 Query: 125 GVELQQAADKVTAT---ITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN 176 + D+V + +TD+ + D G+ + T+G P+ Sbjct: 119 VAGHPYSLDQVISVERGVTDEPEELPEVPDSGDEPPVDDT-------TEGEPIPD 166 >UniRef50_B2S3W7 Flagellar hook assembly scaffolding protein n=2 Tax=Treponema pallidum RepID=B2S3W7_TREPS Length = 153 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ++ + + + FL LL+AQL +QDPT PM++ + +Q+AQ S++ + ++ Sbjct: 26 INKQLEAGARSAKRELGKDDFLHLLIAQLTHQDPTAPMQDTQFIAQMAQFSSLEQMANMS 85 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIP 103 + + N+++LQA +G V + Sbjct: 86 AQVEKLGTLFGNTEALQA---VGKMVEVT 111 >UniRef50_Q18CZ5 Putative basal-body rod modification protein n=5 Tax=Clostridium difficile RepID=Q18CZ5_CLOD6 Length = 202 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 4/149 (2%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 T + + + G + F+ +LVAQ+ NQDP NP + E SQLAQ +T+ + +N Sbjct: 44 TDNGTPIIGQGDDADKDLFMKILVAQMGNQDPMNPQDPTEYVSQLAQFATLEKMSAMNEK 103 Query: 77 LGSI----SGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 L + + + NS A++LIG V + G T V L+ Sbjct: 104 LDVLLALSNSTLINSALSMATSLIGKEVEVSGEEKEDENIVGVVKSTYIKDGEVHLELEV 163 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHS 161 D T+ K +++ ++ E + + Sbjct: 164 DGSDKTVGVKYEKLLKIGEVDENSGEEND 192 >UniRef50_C4V0N7 Possible flagellar basal body rod modification protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0N7_9FIRM Length = 168 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + + + + N+A + +FL LLV Q++ QDP NP +N E SQLAQ S + + ++ Sbjct: 19 AQNQAKAASKDNSALGKDAFLQLLVTQMRYQDPLNPQDNAEYLSQLAQFSALEQMTNVSK 78 Query: 76 TLGSISGQIDNSQSL----QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQA 131 L +S +DN S Q S++IG + T G+ GV + Sbjct: 79 GLEKVSKIVDNIDSSVLIGQLSSMIGQPIQWITET-KGKDGAVTKQNFEGKVIGVSITDG 137 Query: 132 ADKVTATITDKNGAV 146 A + A + ++ V Sbjct: 138 APSIIADVNGQSHKV 152 >UniRef50_UPI0001BCF0E6 flagellar basal body rod modification protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF0E6 Length = 174 Score = 88.6 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 7/139 (5%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N A + +FL LLV Q+K QDP +P +N+E SQLAQ S + + ++ L +S +DN Sbjct: 36 NDALGKDAFLQLLVTQMKYQDPLDPQDNSEYLSQLAQFSALEQMTNVSKGLSEVSKIVDN 95 Query: 87 SQSL----QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 S Q S++IG V T G GV + + A + K Sbjct: 96 INSSVLIGQLSSMIGQPVQWITET-KGEDGQLSKQSFEGKVIGVSITDGTPSIIADVGGK 154 Query: 143 NGAVV--RTIDIGELTAGV 159 V + + IG LTAG Sbjct: 155 THQVQISKVVRIGRLTAGT 173 >UniRef50_A4IMA1 Flagellar hook assembly protein n=5 Tax=Geobacillus RepID=A4IMA1_GEOTN Length = 142 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 42/96 (43%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T +N ++ + + FL +L+AQL+NQDP NPME+ E +Q+A Sbjct: 2 ATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMASF 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 S++ + + + L+ S IG V Sbjct: 62 SSLEQMMNIANLMQQWMQASGRDALLRYSEWIGKTV 97 >UniRef50_B0THA9 Flagellar hook capping protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THA9_HELMI Length = 188 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 11/145 (7%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T D + + + ++ SN+ + FL LLV QL+ QDP PME+ E +Q+AQ S+ Sbjct: 4 TIDNVGSVYTAPAGTTTKKSNSQLGKDDFLKLLVTQLRYQDPMKPMEDKEFIAQMAQFSS 63 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + ++ + +SQ + L + V+ +V ++ V+ + G Sbjct: 64 LEQMKNIADGFEKF----QSSQQKAMTGL--NDVLAKFISVQQQMQADNMIVSAVSFVGK 117 Query: 127 ELQQAADKVTATITDKNGAVVRTID 151 +L+ T I D+ G V+ D Sbjct: 118 QLE-----ATVPILDEKGNPVKDQD 137 >UniRef50_Q8EQX6 Flagellar hook assembly protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQX6_OCEIH Length = 172 Score = 87.9 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 ++ + + + + FL LL+ QL+NQDPT PM++++ SQ+A S++ + Sbjct: 5 DSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSLEQMM 64 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 ++ ++ + S LQ S++IG V T TG E G T+ Sbjct: 65 NMSNSIEMLVNNSLVSPVLQYSHMIGEEVSY--MTFDEETGKETGIETSIV 113 >UniRef50_A1HN34 Flagellar hook capping protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN34_9FIRM Length = 136 Score = 87.9 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 11/120 (9%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 N + FL LLVAQL+ QDP PME+ E +Q+AQ S++ I+ LN+T+ ++ Sbjct: 22 KKNDQLGKDDFLKLLVAQLRYQDPMKPMEDKEFIAQMAQFSSLEQIQNLNSTMVTM---- 77 Query: 85 DNSQSLQASNLIGHGVMIPG-TTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 QA LIG V ++ P+ V + + +++ Sbjct: 78 ------QAMGLIGKTVRWQNENGAEQAGNVRAVKISDRQPYIVVGDTTVELSKIQVVEES 131 >UniRef50_A3DCN1 Flagellar hook capping protein n=3 Tax=Clostridium thermocellum RepID=A3DCN1_CLOTH Length = 323 Score = 87.9 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 12/143 (8%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTS 59 M++ T + ++++ T N +L + FL LL+ QL+ QDP NP+++ E S Sbjct: 1 MAVDAVGRQKTIQEIIDSTTNKSTQRNTGELGKDEFLNLLITQLQYQDPLNPVDDKEFIS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVM-IPGTTVLAGTGSEEGAV 118 Q+AQ S + ++ LN + + +A +IG + +G G EG V Sbjct: 61 QMAQFSALEQMQNLNKSFS----------ATKAFGMIGKYITGTTSNGSDSGAGFVEGIV 110 Query: 119 TTTTPFGVELQQAADKVTATITD 141 + ++ + + + + Sbjct: 111 RSVKMENGKILLEVNGLDVPVDN 133 >UniRef50_C0GJH6 Flagellar hook capping protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJH6_9FIRM Length = 141 Score = 87.9 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT T +T S+ TG+ + FL LLV QL+ QDP +P +N+E +Q+AQ Sbjct: 1 MTTVSAAGTTAATQQSNKATGAMQEMDKDMFLQLLVTQLRYQDPLDPQDNSEFVAQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTG 112 +++ ++ LN T+ + I +S A +G V + L TG Sbjct: 61 TSLEQMQNLNNTMAKLLD-IQSSLHNSAPAFLGLSVTVKDDNGLPLTG 107 >UniRef50_C5CYE7 Flagellar hook capping protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYE7_VARPS Length = 133 Score = 87.5 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + S++ ++ FL +L+ QL QDP PM+N E +Q+AQ +++ ++LN + Sbjct: 7 SGSTATNLQASSLGMEDFLKILLTQLTYQDPLKPMDNQEFMAQMAQFTSLEQTQQLNNKI 66 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ I N +LQ+ LIG V + T G+ G V+ L + D Sbjct: 67 ETL---ITNQAALQSVGLIGKTVDVNTPT-----GAVTGTVSA-------LSLSGDAPLL 111 Query: 138 TITDKNGAVVRTIDIGELTA 157 T+ GAV+ I + +L A Sbjct: 112 TVRTAAGAVLANISLSQLAA 131 >UniRef50_Q0AYN0 Flagellar hook capping protein-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYN0_SYNWW Length = 180 Score = 87.5 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 5/128 (3%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 SS S N + +FL LL+ +LK QDP P+++ E SQ+A S++ + LN++ Sbjct: 19 QSSKSSKEINKGLDKEAFLKLLLTELKYQDPIEPVKDKEFISQMANFSSLEQMTNLNSSF 78 Query: 78 GSISGQIDNS-----QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 +S +++ Q+S ++G V A + +V + Sbjct: 79 NKLSATLNSGILPGLVMQQSSTMVGREVFYTDPDSGASSNGIISSVVFREGIPYYVIDDK 138 Query: 133 DKVTATIT 140 + I+ Sbjct: 139 EITMNNIS 146 >UniRef50_C6IVW2 Flagellar hook capping protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVW2_9BACL Length = 167 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 S ++ + + + +FL L++AQ++NQDP +PM+N ++ +Q+AQ ++V + + Sbjct: 13 NYSQSNVQKASTKSNELGKDAFLKLMIAQMQNQDPLSPMDNTQMVAQIAQFTSVEQLTNI 72 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 + + ++ + N S LIG V T G Sbjct: 73 SEQIAALGESLGND-----SGLIGKEVTWVTETKTGNYDVSTGKA 112 >UniRef50_B5YIG3 Flagellar hook capping protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIG3_THEYD Length = 137 Score = 87.1 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T N + T + N+ + +FL LL AQLK QDP NPM+N E QLA S Sbjct: 4 VTTIFNNPLYTVQEKTTATGNSQIDKEAFLKLLTAQLKYQDPLNPMDNTEFVGQLAMFSA 63 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQ-ASNLIGHGVMIPGTTVLAGTG 112 + + +N TL ++ S +L S +IG ++ T G Sbjct: 64 LEQVININNTLEQLANSQVYSNALMIGSTIIGKTIVTTDGTEYKAQG 110 >UniRef50_C1TKJ1 Flagellar hook capping protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKJ1_9BACT Length = 150 Score = 86.3 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 7/146 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT +P ++ S+ ++ +A + FL L + QLKNQDP PM+ NE+ +Q +Q Sbjct: 1 MTTVNPYSSASSSYTAGQSREIKSAMDKDDFLKLYIEQLKNQDPLEPMDTNEMAAQFSQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 +TV + +N+++ + Q A + IG V T Sbjct: 61 TTVEQLMNMNSSMEEMLSL----QLGNAVSYIGFEVTYSHAYQDDQGNQLTEEKTGIVQ- 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTI 150 + V +TD + A + I Sbjct: 116 --SISHENGSVVLKMTDGSEADISRI 139 >UniRef50_D1C163 Flagellar hook capping protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C163_SPHTD Length = 150 Score = 86.3 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 4/96 (4%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T+ TN G SS++ + ++ + FL LL AQL+NQDP PME+ E +QLAQ+++ Sbjct: 6 VTNQTNPGTDAASSTTFSPADRL-GKQEFLMLLTAQLRNQDPLRPMEDTEFIAQLAQLNS 64 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI 102 + ++++N TL ++ S Q ++LIG V Sbjct: 65 LEQMQQMNETLSTLVEM---SVLAQTASLIGRHVTA 97 >UniRef50_C9LSP2 Flagellar hook capping protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSP2_9FIRM Length = 178 Score = 86.3 bits (212), Expect = 8e-16, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 10/151 (6%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 S + N + + +FL LLV QL++QDP +P +N + +QLAQ S++ + ++ Sbjct: 19 AKYEASQTKTARKNDSLGKDAFLQLLVTQLRHQDPLSPDDNTQYIAQLAQFSSLEQMTQM 78 Query: 74 NTTLGSISGQIDNSQSL----QASNLIGHGVM---IPGTTVLAGTGSEEGAVTTTTPFGV 126 ++S + N S SN+IG + + T G + GV Sbjct: 79 VKGFENVSKLVSNIDSSVLVGSLSNMIGKNIQWTHVTKTKDAEGNPKTKSETFAGNVRGV 138 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTA 157 ++ K D G + +++ E+ A Sbjct: 139 KVSNG--KPMVVAQDAKGKL-HEVEVSEIDA 166 >UniRef50_Q3ADD8 Flagellar hook assembly protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD8_CARHZ Length = 135 Score = 85.9 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 + +TS+++ + + + +FL + +AQL+ QDP NP + E ++LAQ + + Sbjct: 9 SSQMSTSANAASQTKLNLDKDAFLKIFLAQLQYQDPLNPADGTEFIAELAQFGMLEQLTN 68 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEG 116 L L + + Q QA+ LIG V I G Sbjct: 69 LTDALTKL---LQFEQKAQAAALIGKTVKIATAAETLVEGVVSA 109 >UniRef50_B8FTP2 Flagellar hook capping protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTP2_DESHD Length = 184 Score = 85.9 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI---- 80 + + FL LLVA+L NQDP +PM+N ++ +Q+AQ S++ + ++ ++ ++ Sbjct: 27 ATKEVLGKDDFLKLLVAELTNQDPLSPMDNKDMITQMAQFSSLEQMNNMSKSMENLVGAF 86 Query: 81 SGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 NS Q + LIG V + G+G G V + Sbjct: 87 GALFQNSLLSQGAALIGKHVEGAN---IDGSGFVNGIVESVQWLN 128 >UniRef50_A8MHE3 Flagellar hook capping protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MHE3_ALKOO Length = 141 Score = 85.5 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 9/141 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ + T S + A + +FL LLV QLKNQDP NPM++ + +Q+A Sbjct: 2 SDISKVNDTTHKYRDYSGNQEKKQTDALGKDAFLNLLVTQLKNQDPLNPMDDRDFIAQMA 61 Query: 63 QISTVSGIEKLNTTLGSISG-------QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 Q S++ ++ LNTTL + Q++N+ +N++ V I L E Sbjct: 62 QFSSLEQMQNLNTTLTNTQSSIMEHITQMNNNFVKSQTNIVDQLVKI--NEGLRKLTGEN 119 Query: 116 GAVTTTTPFGVELQQAADKVT 136 V G ++++ DK+ Sbjct: 120 PEVPEVPKEGDKVEEGTDKIK 140 >UniRef50_C0QVF9 Flagellar hook capping protein n=2 Tax=Brachyspira RepID=C0QVF9_BRAHW Length = 264 Score = 85.2 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 5/125 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 + + + +FL LL Q+ +QDP +PM+N ++ +QLAQ S+V + ++N L S+ Sbjct: 34 PTQNSLGKDAFLKLLTVQMSHQDPLSPMDNRDMIAQLAQFSSVEQMTEVNKNLDSMKTFY 93 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 + +++G V + G E + T GV L D T+ ++ Sbjct: 94 SSQ---TGYSMLGKSVEVMDEAGNRFLGPVEMVMENDT--GVALAVRTDNGLITVRPEDV 148 Query: 145 AVVRT 149 +V + Sbjct: 149 MIVHS 153 >UniRef50_UPI0001788768 flagellar hook capping protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788768 Length = 186 Score = 84.8 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 10/99 (10%) Query: 7 TTDPTNT-----GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 TDP +T + + S+ G+ + FL++L+ QL++QDP PM++ E +Q+ Sbjct: 2 ATDPVSTKNMWPNYAKGNISTKNGNGQELGKDQFLSILITQLRHQDPLQPMQDREFIAQM 61 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGV 100 AQ +++ + +NT L ++S + AS+LIG + Sbjct: 62 AQFTSLEQLMNINTQLTAMSQSLGA-----ASSLIGKQI 95 >UniRef50_B7XQJ3 Basal-body rod modification protein flgD n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XQJ3_ENTBH Length = 115 Score = 84.4 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 V + A V+ I+DK+G VVRTID+G +AG F WDG +G AP G+Y A + Sbjct: 4 SVAVTAATGNVSIKISDKDGNVVRTIDMGAQSAGSSDFIWDGKNENGEVAPAGTYTFAAT 63 Query: 185 ASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDL---GTYGTTTLDEVRQI 230 N G + A V V +G + L G G+ L +++ I Sbjct: 64 TKNDKGESVAMATSLPATVTSVTLSKTGGEMLLNLAGGMGSVKLSQIQTI 113 >UniRef50_B7J1L2 Flagellar hook capping protein n=21 Tax=Borrelia RepID=B7J1L2_BORBZ Length = 147 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 11 TNTGVSTTSSSSLTGSNAADL-QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 +N T + SN +L + FL LL+ QL+ QDPTNPM++ E +Q+AQ S + Sbjct: 16 SNKVKKKTDFNVDNISNKVNLGKDDFLKLLITQLRYQDPTNPMKDKEFIAQMAQFSALEQ 75 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 + ++ + +S ++ + L +L+G + G T P Sbjct: 76 MANMSRSFEKLSSSLEIRKDL---DLLGKVIKFQHGDGEIVEGRVTNIKTGAIP 126 >UniRef50_P23455 FlaA locus uncharacterized protein ylxG n=5 Tax=Bacillus RepID=YLXG_BACSU Length = 140 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Query: 20 SSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 +++++ +N++ + FL +L+ Q++NQDP NP+++ E SQ+A S++ + LNTT+ Sbjct: 14 TNTVSTNNSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSSLEQMMNLNTTMTQ 73 Query: 80 ISGQIDNSQSLQASNLIGHGVM-IPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT 138 D + + +G V G + TG+ + + L + A Sbjct: 74 FVENQDPFTT--YVDWMGKEVSWTDGKSATDKTGTVSSVKHFKGNYYLVLDDGTEISPAN 131 Query: 139 I 139 + Sbjct: 132 V 132 >UniRef50_UPI0001C312A9 flagellar hook capping protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312A9 Length = 152 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 7/135 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + V T+P N +T +S T + + FL LL+ Q++NQDP NP + E Q+ Sbjct: 1 MPVDPTNPVNNAPATYDNS--TRRESFLGKDDFLKLLIGQMQNQDPLNPTDGAEYMGQMT 58 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S + I L T + + N QA LIG V + G T Sbjct: 59 QFSILEQITNLGQTTQAAAS---NDYDAQAIRLIGQTVSYLAR--VNEDGRSVLRSFTGR 113 Query: 123 PFGVELQQAADKVTA 137 V + ++T Sbjct: 114 VESVTFTSSGPQLTI 128 >UniRef50_C8W1G3 Flagellar hook capping protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G3_DESAS Length = 134 Score = 83.6 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 12/130 (9%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 + S +++ S S + +FL L + QLKNQDP +P + N +Q+AQ S + Sbjct: 3 NSTSGVNGSASTAGSTNASGMVLDKEAFLKLFIEQLKNQDPLSPQDPNAFMNQMAQFSVM 62 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 + LNT++ + ID +A++L+G VM+ G +G + T V+ Sbjct: 63 EQLMNLNTSITQL---IDLQNLTEAASLVGRTVMVTG---------ADGTEISGTVEKVQ 110 Query: 128 LQQAADKVTA 137 ++Q A+K+ Sbjct: 111 IRQNANKIVI 120 >UniRef50_A4XIY2 Flagellar hook capping protein n=2 Tax=Clostridia RepID=A4XIY2_CALS8 Length = 169 Score = 83.6 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 12/115 (10%) Query: 27 NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDN 86 N + FL LLV QL+ QDP PME+ E +QLAQ S + ++ LN + Sbjct: 27 NNTLGKQEFLNLLVTQLRYQDPLKPMEDKEFVAQLAQFSALEQMQNLNESFE-------- 78 Query: 87 SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 ++A N+IG V+ + + + EG V + G ++ + V T + Sbjct: 79 --LIKAQNMIGRYVVATNPS--DTSKTVEGRVDSIRVDGSKIYLKVNGVEVTTEN 129 >UniRef50_A7GGP7 Flagellar hook capping protein n=10 Tax=Clostridium RepID=A7GGP7_CLOBL Length = 273 Score = 83.6 bits (205), Expect = 5e-15, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 12/117 (10%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 NTG+ T + + +++F +L A+L NQDPTN + E SQLAQ S++ + Sbjct: 43 NTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPTNAKDGTEYVSQLAQFSSLEQMA 102 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 LN+ + ASN IG V++ G V G E+ Sbjct: 103 NLNSMMK----------LTGASNFIGKVVLLR--RFDEQGNQYAGIVRNVIKNGDEI 147 >UniRef50_C4G362 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G362_ABIDE Length = 317 Score = 83.6 bits (205), Expect = 5e-15, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 14 GVSTTSSSSLTGSNAADL----QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 GV + + + A DL + SFL LL AQ++NQDP P N E SQLA S++ Sbjct: 24 GVISKTKNLQNVKTADDLNKLGKDSFLKLLCAQMENQDPMQPQSNTEWVSQLATYSSLEQ 83 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 ++ LN T+ + QA LIG V++ + G V + G Sbjct: 84 MQNLNATIAN----------SQAYGLIGQEVVMAAKDSDGHETTVSGKVDFVSVKG 129 >UniRef50_A0Q029 Flagellar hook assembly protein FlgD n=3 Tax=Clostridium RepID=A0Q029_CLONN Length = 274 Score = 83.6 bits (205), Expect = 5e-15, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 10/89 (11%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 +T + + +++FL +L A+L NQDP N ++ + SQLAQ S++ + LN+ Sbjct: 50 ATKRGTKIVKKGQEMDKNAFLKILTAELTNQDPMNAKDSTQYISQLAQFSSLEQMANLNS 109 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPG 104 T+ A N++G V + Sbjct: 110 TMS----------FNSAGNMVGKTVALSS 128 >UniRef50_Q2RKE4 Flagellar hook capping protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKE4_MOOTA Length = 140 Score = 83.2 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 10/113 (8%) Query: 26 SNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQID 85 N + FL LL AQL+NQDP NP+ N + +Q+AQ S + + L + Sbjct: 19 PNKGLGKDDFLKLLAAQLQNQDPLNPVSNTDFIAQMAQFSVLEQMNNLYESFNE------ 72 Query: 86 NSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT 138 + LQA LIG V + T + + +P G+ L +V+ Sbjct: 73 -ALMLQAVGLIGKEVTA---RINDQTLTGTVSKVNWSPEGIILTVGEQQVSLK 121 >UniRef50_A6TRQ2 Flagellar hook capping protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRQ2_ALKMQ Length = 134 Score = 83.2 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Query: 21 SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI 80 + + + + +FL LLV Q+ NQDP NPME+ E SQ+AQ S++ ++ LN L Sbjct: 17 NEKKKNTSDLDKDAFLKLLVTQMSNQDPLNPMEDREFISQMAQFSSLEQMQNLNDGLKDT 76 Query: 81 SGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT 138 + + + +NL+ + + +P E + T T Sbjct: 77 KELLADHITQMNNNLV-KSQTTIADQLDLMNIQINKVLNHISPEAPENEDNEAGGTTT 133 >UniRef50_B7GGB3 Flagellar hook capping protein n=3 Tax=Bacillaceae RepID=B7GGB3_ANOFW Length = 163 Score = 82.1 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 27/148 (18%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T DP+ + TG ++ + FL +L+AQL++QDP NPME+ E SQ+A Sbjct: 9 MTAIDPSLLLSQRQVAQRETGKSSL-GKDDFLKILIAQLQHQDPLNPMEDREFISQMANF 67 Query: 65 STVSGIEKLNTT---------------------LGSISGQIDNSQSLQASNLIGHGVMIP 103 S++ + ++ L + Q Q S IG V Sbjct: 68 SSLEQMVNMSNMLSKFIETQTGTSEKLVGTLDALQKLIQQQSAPSLAQYSEWIGKTV--- 124 Query: 104 GTTVLAGTGSEEGAVTTTTPFGVELQQA 131 T +G V T +EL+Q Sbjct: 125 --TWDEQSGVVRAVVQKGTDIWLELEQG 150 >UniRef50_A1UTS5 Flagellar hook capping protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTS5_BARBK Length = 190 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 21 SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI 80 + TG+ +F+ LLVAQ+KNQDPTNPM + E +QLA S V K+N L + Sbjct: 22 TPDTGAKKNTDYDTFVKLLVAQMKNQDPTNPMNSTEFVAQLASFSMVEQAIKMNDKLEQV 81 Query: 81 SGQIDNSQSLQASNLIGHGVMIPGT 105 + N A +G + Sbjct: 82 ---LANGAISGAEGYVGKYIQFEDK 103 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0MGC4 Flagellar hook capping protein n=1 Tax=Rhodother... 172 1e-41 UniRef50_C0GT27 Flagellar hook capping protein n=1 Tax=Desulfona... 167 2e-40 UniRef50_Q2Y9E5 Flagellar hook capping protein n=1 Tax=Nitrososp... 167 2e-40 UniRef50_B4UFG0 Flagellar hook capping protein n=3 Tax=Anaeromyx... 166 6e-40 UniRef50_C1DC22 Flagellar hook capping protein n=1 Tax=Laribacte... 164 2e-39 UniRef50_Q3SIE0 Flagellar basal-body rod modification protein Fl... 163 5e-39 UniRef50_A9IKQ3 Basal-body rod modification protein FlgD n=5 Tax... 163 6e-39 UniRef50_C6C0W1 Flagellar hook capping protein n=1 Tax=Desulfovi... 162 9e-39 UniRef50_C6BXM0 Flagellar hook capping protein n=1 Tax=Desulfovi... 161 2e-38 UniRef50_D1U8I5 Flagellar hook capping protein n=1 Tax=Desulfovi... 160 4e-38 UniRef50_Q0AA88 Flagellar hook capping protein n=1 Tax=Alkalilim... 159 6e-38 UniRef50_Q3J8L2 Flagellar hook capping protein n=2 Tax=Nitrosoco... 158 1e-37 UniRef50_C6HWM8 Flagellar hook capping protein n=1 Tax=Leptospir... 157 2e-37 UniRef50_Q0AJ54 Flagellar hook capping protein n=2 Tax=Nitrosomo... 157 2e-37 UniRef50_B7UXB0 Flagellar basal-body rod modification protein Fl... 157 4e-37 UniRef50_A1WUE3 Flagellar hook capping protein n=1 Tax=Halorhodo... 156 5e-37 UniRef50_Q1QW30 Flagellar hook capping protein n=1 Tax=Chromohal... 155 9e-37 UniRef50_B8GQB0 Flagellar hook capping protein n=1 Tax=Thioalkal... 155 1e-36 UniRef50_C4KAU5 Flagellar hook capping protein n=2 Tax=Rhodocycl... 154 2e-36 UniRef50_C5CXV4 Flagellar hook capping protein n=1 Tax=Variovora... 154 2e-36 UniRef50_B9ZPV2 Flagellar hook capping protein n=1 Tax=Thioalkal... 154 3e-36 UniRef50_Q1MQV6 Flagellar hook capping protein n=1 Tax=Lawsonia ... 154 3e-36 UniRef50_C7LRK4 Flagellar hook capping protein n=1 Tax=Desulfomi... 154 3e-36 UniRef50_A4G6B2 Basal-body rod modification protein FlgD n=2 Tax... 153 3e-36 UniRef50_A6GSX8 Flagellar hook capping protein n=1 Tax=Limnobact... 153 4e-36 UniRef50_Q2SDU0 Flagellar hook capping protein n=4 Tax=Gammaprot... 153 5e-36 UniRef50_C6MIR9 Flagellar hook capping protein n=1 Tax=Nitrosomo... 152 7e-36 UniRef50_Q1JZT2 Flagellar hook capping protein n=1 Tax=Desulfuro... 151 2e-35 UniRef50_B6AMC0 Probable flagellar hook capping protein FlgD n=2... 150 3e-35 UniRef50_A1VDY6 Flagellar hook capping protein n=5 Tax=Desulfovi... 150 3e-35 UniRef50_Q1NVF9 Flagellar hook capping protein n=2 Tax=delta pro... 150 3e-35 UniRef50_Q3JX26 Basal-body rod modification protein FlgD n=56 Ta... 150 4e-35 UniRef50_C4XMS4 Flagellar basal-body rod modification protein Fl... 150 4e-35 UniRef50_Q5X5U4 Flagellar basal-body rod modification protein Fl... 148 1e-34 UniRef50_B4SIL9 Flagellar hook capping protein n=13 Tax=Xanthomo... 148 1e-34 UniRef50_B8FK44 Flagellar hook capping protein n=1 Tax=Desulfati... 148 2e-34 UniRef50_Q1GZW4 Flagellar hook capping protein n=3 Tax=cellular ... 147 2e-34 UniRef50_A7K5D2 Flagellar basal-body rod modification protein Fl... 147 4e-34 UniRef50_B9CZX6 Flagellar hook assembly protein n=2 Tax=Campylob... 147 4e-34 UniRef50_D2L1Z4 Flagellar hook capping protein n=1 Tax=Desulfovi... 146 7e-34 UniRef50_Q21IK8 Flagellar hook capping protein n=4 Tax=Gammaprot... 145 1e-33 UniRef50_A8F889 Flagellar hook capping protein n=1 Tax=Thermotog... 145 1e-33 UniRef50_A6LMJ0 Flagellar hook capping protein n=1 Tax=Thermosip... 145 1e-33 UniRef50_B7IDJ4 Basal-body rod modification protein FlgD n=1 Tax... 145 2e-33 UniRef50_C8QYQ2 Flagellar hook capping protein n=1 Tax=Desulfuri... 145 2e-33 UniRef50_A3UFN5 Flagellar hook assembly protein FlgD n=1 Tax=Oce... 144 2e-33 UniRef50_Q6MHY7 Basal-body rod modification protein flgD n=1 Tax... 144 2e-33 UniRef50_Q39R05 Flagellar hook capping protein n=2 Tax=Geobacter... 144 2e-33 UniRef50_B8J086 Flagellar hook capping protein n=1 Tax=Desulfovi... 143 3e-33 UniRef50_B4EYN7 Basal-body rod modification protein n=3 Tax=Prot... 143 4e-33 UniRef50_Q5R0P5 Flagellar hook capping protein n=2 Tax=Idiomarin... 143 5e-33 UniRef50_A4BQE9 Flagellar basal body rod modification protein n=... 143 6e-33 UniRef50_Q30UM0 Flagellar hook capping protein n=2 Tax=Campyloba... 142 7e-33 UniRef50_B7VKM1 Flagellar hook capping protein FlgD n=54 Tax=Vib... 142 7e-33 UniRef50_Q1YV96 Flagellar basal body rod modification protein n=... 142 1e-32 UniRef50_A7HN98 Flagellar hook capping protein n=1 Tax=Fervidoba... 141 1e-32 UniRef50_C6WVA8 Flagellar hook capping protein n=1 Tax=Methylote... 141 2e-32 UniRef50_C5V018 Flagellar hook capping protein n=1 Tax=Gallionel... 141 2e-32 UniRef50_C6P5G1 Flagellar hook capping protein n=1 Tax=Sideroxyd... 141 2e-32 UniRef50_Q46PG2 Flagellar hook capping protein n=4 Tax=Cupriavid... 141 2e-32 UniRef50_C5SD64 Flagellar hook capping protein n=1 Tax=Allochrom... 141 2e-32 UniRef50_C8WYV7 Flagellar hook capping protein n=1 Tax=Desulfoha... 140 3e-32 UniRef50_A6FKY3 Possible FlgD protein n=1 Tax=Roseobacter sp. Az... 140 4e-32 UniRef50_A6FHZ1 Flagellar basal body rod modification protein n=... 139 6e-32 UniRef50_Q1N303 Flagellar hook capping protein n=1 Tax=Bermanell... 138 1e-31 UniRef50_A9BEX8 Flagellar hook capping protein n=1 Tax=Petrotoga... 136 7e-31 UniRef50_A1B2H8 Flagellar hook capping protein n=1 Tax=Paracoccu... 136 7e-31 UniRef50_Q3IDW5 Flagellar biosynthesis; initiation of hook assem... 136 7e-31 UniRef50_Q47I24 Flagellar hook capping protein n=2 Tax=Betaprote... 136 8e-31 UniRef50_Q3A5C3 Flagellar hook initiation protein FlgD n=1 Tax=P... 135 9e-31 UniRef50_A4SL11 Flagellar hook capping protein FlgD n=3 Tax=Aero... 135 9e-31 UniRef50_Q1ZFB9 Flagellar basal body rod modification protein n=... 135 9e-31 UniRef50_D1NZK4 Basal-body rod modification protein FlgD n=3 Tax... 135 1e-30 UniRef50_Q2LSZ6 Flagellar hook capping protein n=1 Tax=Syntrophu... 135 1e-30 UniRef50_Q6AJT4 Related to basal-body rod modification protein (... 135 1e-30 UniRef50_Q2RZC4 Basal-body rod modification protein FlgD n=1 Tax... 135 1e-30 UniRef50_B9NLP1 Basal-body rod modification protein FlgD n=2 Tax... 135 1e-30 UniRef50_B6IQD6 Basal-body rod modification protein FlgD, putati... 135 2e-30 UniRef50_Q485P4 Basal-body rod modification protein FlgD n=1 Tax... 135 2e-30 UniRef50_A4BEL4 Flagellar hook capping protein n=1 Tax=Reinekea ... 134 3e-30 UniRef50_A3PFK9 Flagellar hook capping protein n=4 Tax=Rhodobact... 134 3e-30 UniRef50_Q0FVE9 Possible FlgD protein n=2 Tax=Rhodobacteraceae R... 134 3e-30 UniRef50_P57421 Basal-body rod modification protein flgD n=4 Tax... 134 3e-30 UniRef50_A8TLX1 Flagellar hook capping protein n=1 Tax=alpha pro... 133 3e-30 UniRef50_A7HV67 Flagellar hook capping protein n=1 Tax=Parvibacu... 133 4e-30 UniRef50_A8FXW6 Flagellar hook capping protein n=21 Tax=Shewanel... 133 4e-30 UniRef50_B5JZB8 Basal-body rod modification protein FlgD n=2 Tax... 133 4e-30 UniRef50_B2PY25 Putative uncharacterized protein n=1 Tax=Provide... 133 5e-30 UniRef50_A3U109 Related to basal-body rod modification protein (... 132 8e-30 UniRef50_B4WBD2 Flagellar hook capping protein, putative n=2 Tax... 132 1e-29 UniRef50_A7ZB54 Flagellar hook assembly protein n=1 Tax=Campylob... 132 1e-29 UniRef50_D0L1M4 Flagellar hook capping protein n=1 Tax=Halothiob... 131 1e-29 UniRef50_Q5LMU9 Basal-body rod modification protein FlgD n=1 Tax... 131 1e-29 UniRef50_Q0FMJ5 Flagellar hook capping protein n=1 Tax=Roseovari... 131 2e-29 UniRef50_A0Z355 Flagellar hook capping protein n=3 Tax=unclassif... 131 2e-29 UniRef50_C8RX78 Flagellar hook capping protein n=1 Tax=Rhodobact... 131 2e-29 UniRef50_A4U4K0 Basal-body rod modification protein flgD n=1 Tax... 131 2e-29 UniRef50_D1U365 Flagellar hook capping protein n=1 Tax=Desulfovi... 131 2e-29 UniRef50_Q16DP6 Flagellar basal-body rod modification protein, p... 130 3e-29 UniRef50_Q1K368 Flagellar hook capping protein n=1 Tax=Desulfuro... 130 3e-29 UniRef50_A5IJB4 Flagellar hook capping protein n=6 Tax=Thermotog... 130 5e-29 UniRef50_Q4K867 Basal-body rod modification protein FlgD n=15 Ta... 130 5e-29 UniRef50_Q1GCA6 Flagellar basal-body rod modification protein Fl... 130 6e-29 UniRef50_B8DS26 Flagellar hook capping protein n=1 Tax=Desulfovi... 129 7e-29 UniRef50_B6AV37 Possible FlgD protein n=1 Tax=Rhodobacterales ba... 129 7e-29 UniRef50_A5ESH7 Putative flagellar basal-body rod modification p... 129 8e-29 UniRef50_A4EG00 Flagellar basal-body rod modification protein, p... 129 9e-29 UniRef50_A4WT49 Flagellar hook capping protein n=5 Tax=Rhodobact... 129 1e-28 UniRef50_A3T090 Flagellar hook assembly protein FlgD n=2 Tax=Sul... 128 1e-28 UniRef50_B5EEN7 Flagellar hook capping protein n=5 Tax=Geobacter... 128 1e-28 UniRef50_B4RG78 Flagellar hook assembly protein n=1 Tax=Phenylob... 128 1e-28 UniRef50_B3EBG4 Flagellar hook capping protein n=2 Tax=Desulfuro... 128 1e-28 UniRef50_A8LNK4 Flagellar hook capping protein FlgD n=1 Tax=Dino... 128 1e-28 UniRef50_Q28JI8 Basal-body rod modification protein FlgD n=1 Tax... 128 1e-28 UniRef50_A0RLY6 Flagellar hook assembly protein n=3 Tax=Campylob... 128 2e-28 UniRef50_Q15R84 Flagellar hook capping protein n=2 Tax=Alteromon... 128 2e-28 UniRef50_A9DSD1 Flagellar hook capping protein n=1 Tax=Oceanibul... 127 3e-28 UniRef50_B2UJX2 Flagellar hook capping protein n=6 Tax=Ralstonia... 127 3e-28 UniRef50_Q0ARV5 Flagellar hook capping protein n=1 Tax=Maricauli... 126 4e-28 UniRef50_Q2LKA7 FlgDL n=1 Tax=Aeromonas hydrophila RepID=Q2LKA7_... 126 4e-28 UniRef50_A4U361 Basal-body rod modification protein FlgD n=1 Tax... 126 4e-28 UniRef50_C5SMJ0 Flagellar hook capping protein n=2 Tax=Asticcaca... 126 4e-28 UniRef50_A6W1A4 Flagellar hook capping protein n=2 Tax=Marinomon... 126 5e-28 UniRef50_B9L649 Flagellar hook capping protein n=2 Tax=Nautiliac... 126 5e-28 UniRef50_B9Z358 Flagellar hook capping protein n=1 Tax=Lutiella ... 126 7e-28 UniRef50_A4C6H0 Flagellar basal body rod modification protein n=... 125 8e-28 UniRef50_C1SLD5 Flagellar hook capping protein n=1 Tax=Denitrovi... 125 9e-28 UniRef50_Q2RWZ4 Flagellar hook capping protein n=1 Tax=Rhodospir... 125 1e-27 UniRef50_D1B5D1 Flagellar hook capping protein n=1 Tax=Sulfurosp... 125 1e-27 UniRef50_Q7NU17 Basal-body rod modification protein FlgD n=1 Tax... 124 3e-27 UniRef50_A3K323 Possible FlgD protein n=1 Tax=Sagittula stellata... 123 3e-27 UniRef50_Q4JMN7 Predicted flagellar hook capping protein n=1 Tax... 123 5e-27 UniRef50_A4XNR6 Flagellar hook capping protein n=1 Tax=Pseudomon... 123 5e-27 UniRef50_B6QZA4 Flagellar hook capping protein n=1 Tax=Pseudovib... 123 5e-27 UniRef50_A5V5R8 Flagellar hook capping protein n=1 Tax=Sphingomo... 122 7e-27 UniRef50_B1XWJ6 Flagellar hook capping protein n=1 Tax=Leptothri... 122 9e-27 UniRef50_B0UIW9 Flagellar hook capping protein n=9 Tax=Alphaprot... 122 1e-26 UniRef50_C4TUA9 Basal-body rod modification protein n=1 Tax=Yers... 121 1e-26 UniRef50_B2K1Q4 Flagellar hook capping protein n=23 Tax=Yersinia... 121 1e-26 UniRef50_C6NWL0 Flagellar basal-body rod modification protein Fl... 121 2e-26 UniRef50_C1A556 Putative flagellar basal-body rod modification p... 121 2e-26 UniRef50_A6DYV3 Flagellar scaffolding protein FlgD n=1 Tax=Roseo... 120 3e-26 UniRef50_Q31FK9 Flagellar hook capping protein FlgD n=1 Tax=Thio... 120 4e-26 UniRef50_A3SKB3 Possible FlgD protein n=1 Tax=Roseovarius nubinh... 120 5e-26 UniRef50_A1VXC7 Flagellar hook assembly protein n=15 Tax=Campylo... 120 6e-26 UniRef50_Q2CGF8 Flagellar hook assembly protein FlgD n=1 Tax=Oce... 119 7e-26 UniRef50_A3VB77 Possible FlgD protein n=1 Tax=Rhodobacterales ba... 119 8e-26 UniRef50_Q0EZL7 Flagellar hook capping protein n=1 Tax=Mariprofu... 119 8e-26 UniRef50_A9BQ62 Flagellar hook capping protein n=4 Tax=cellular ... 118 1e-25 UniRef50_A3W5K4 Possible FlgD protein n=2 Tax=Roseovarius RepID=... 118 1e-25 UniRef50_A1WFE4 Flagellar hook capping protein n=8 Tax=Comamonad... 118 2e-25 UniRef50_C7BXG3 Flagellar hook assembly protein FlgD n=5 Tax=Hel... 117 3e-25 UniRef50_A0P3G8 Flagellar hook capping protein n=2 Tax=Labrenzia... 116 5e-25 UniRef50_B6JMC9 Flagellar hook assembly protein n=13 Tax=Helicob... 116 6e-25 UniRef50_Q2RRB2 Flagellar hook capping protein n=1 Tax=Rhodospir... 116 6e-25 UniRef50_Q2WA16 Flagellar hook capping protein n=2 Tax=Magnetosp... 116 7e-25 UniRef50_B0SWE2 Flagellar hook capping protein n=3 Tax=Caulobact... 115 1e-24 UniRef50_Q2C8I4 Flagellar basal body rod modification protein n=... 115 1e-24 UniRef50_C4SBL2 Flagellar hook capping protein n=4 Tax=Enterobac... 114 2e-24 UniRef50_A6F9Q1 LfgD n=1 Tax=Moritella sp. PE36 RepID=A6F9Q1_9GAMM 114 2e-24 UniRef50_A8FPA7 Flagellar hook capping protein n=8 Tax=Shewanell... 114 3e-24 UniRef50_C6BZU8 Flagellar hook capping protein n=1 Tax=Desulfovi... 113 4e-24 UniRef50_C6XM56 Flagellar hook capping protein n=1 Tax=Hirschia ... 113 5e-24 UniRef50_Q2BQT9 Basal-body rod modification protein FlgD n=1 Tax... 113 7e-24 UniRef50_UPI0001826559 flagellar basal body rod modification pro... 113 7e-24 UniRef50_C4UZG9 Basal-body rod modification protein n=2 Tax=Ente... 113 7e-24 UniRef50_A3V266 Flagellar scaffolding protein FlgD n=3 Tax=Rhodo... 112 1e-23 UniRef50_A3V1Q8 Possible FlgD protein n=1 Tax=Loktanella vestfol... 112 1e-23 UniRef50_A7JZA8 Flagellar basal-body rod modification protein Fl... 111 2e-23 UniRef50_C7I103 Flagellar hook capping protein n=1 Tax=Thiomonas... 110 3e-23 UniRef50_D0I441 Flagellar basal-body rod modification protein Fl... 110 4e-23 UniRef50_A1T0J4 Flagellar basal-body rod modification protein Fl... 110 6e-23 UniRef50_A2SKD5 Flagellar hook capping protein n=1 Tax=Methylibi... 108 1e-22 UniRef50_A0LDL3 Flagellar hook capping protein n=1 Tax=Magnetoco... 108 1e-22 UniRef50_Q0C5K2 Putative basal-body rod modification protein Flg... 108 2e-22 UniRef50_B1K3C8 Flagellar hook capping protein n=2 Tax=Burkholde... 107 3e-22 UniRef50_Q2CDG3 Possible FlgD protein n=1 Tax=Oceanicola granulo... 106 7e-22 UniRef50_A6CQ95 Flagellar basal body rod modification protein D ... 106 8e-22 UniRef50_A3VS68 Possible FlgD protein n=1 Tax=Parvularcula bermu... 105 2e-21 UniRef50_A5L6P4 Flagellar basal body rod modification protein D ... 104 3e-21 UniRef50_C0QPA6 Flagellar hook capping protein FlgD n=1 Tax=Pers... 103 4e-21 UniRef50_B6IT44 Basal-body rod modification protein FlgD, putati... 103 4e-21 UniRef50_Q7M8B1 FLAGELLAR BIOSYNTHESIS PROTEIN n=1 Tax=Wolinella... 103 7e-21 UniRef50_Q1NGN4 Flagellar scaffolding protein n=1 Tax=Sphingomon... 103 7e-21 UniRef50_Q2NX18 Flagellar basal-body rod modification protein Fl... 102 9e-21 UniRef50_Q7NXC4 Basal-body rod modification protein FlgD n=1 Tax... 100 3e-20 UniRef50_D0Y261 Flagellar hook capping protein n=1 Tax=Caulobact... 100 4e-20 UniRef50_C5EXK1 Flagellar basal body rod modification protein n=... 100 5e-20 UniRef50_Q8D3G1 FlgD protein n=1 Tax=Wigglesworthia glossinidia ... 100 7e-20 UniRef50_A6Q2N2 Flagellar hook capping protein FlgD n=1 Tax=Nitr... 100 7e-20 UniRef50_Q07ST8 Flagellar hook capping protein n=14 Tax=Bradyrhi... 100 8e-20 UniRef50_C8WBV8 Flagellar hook capping protein n=4 Tax=Zymomonas... 99 1e-19 UniRef50_Q9KA39 Flagellar hook assembly protein n=2 Tax=Bacillus... 98 2e-19 UniRef50_A5FUQ9 Flagellar hook capping protein n=1 Tax=Acidiphil... 97 4e-19 UniRef50_B3QDF7 Flagellar hook capping protein n=9 Tax=Bradyrhiz... 96 9e-19 UniRef50_D2TJ83 Lateral flagellar rod protein n=2 Tax=Citrobacte... 94 4e-18 UniRef50_B9Z4U7 Flagellar basal body rod modification protein n=... 94 4e-18 UniRef50_A8VS08 Succinyl-CoA synthetase, alpha subunit n=1 Tax=B... 93 7e-18 UniRef50_A3IF23 Flagellar basal body rod modification protein D ... 93 8e-18 UniRef50_A3NFX4 Flagellar hook capping protein n=8 Tax=pseudomal... 92 2e-17 UniRef50_C1PG44 Flagellar hook capping protein n=1 Tax=Bacillus ... 92 2e-17 UniRef50_B2V6Q5 Flagellar hook capping protein n=1 Tax=Sulfurihy... 91 3e-17 UniRef50_Q5WFR3 Flagellar basal-body rod modification protein Fl... 90 5e-17 UniRef50_UPI0001788768 flagellar hook capping protein n=1 Tax=Ge... 90 7e-17 UniRef50_A4J759 Flagellar hook capping protein n=1 Tax=Desulfoto... 89 1e-16 UniRef50_Q67K21 Flagellar hook assembly protein n=1 Tax=Symbioba... 88 2e-16 UniRef50_C4V0N7 Possible flagellar basal body rod modification p... 88 2e-16 UniRef50_B9KE35 Flagellar hook assembly protein FlgD n=1 Tax=Cam... 88 2e-16 UniRef50_A8MHE3 Flagellar hook capping protein n=1 Tax=Alkaliphi... 88 3e-16 UniRef50_D2LSH3 Flagellar hook capping protein n=1 Tax=Bacillus ... 88 3e-16 UniRef50_A4IMA1 Flagellar hook assembly protein n=5 Tax=Geobacil... 87 3e-16 UniRef50_C6IVW2 Flagellar hook capping protein n=1 Tax=Paenibaci... 87 4e-16 UniRef50_UPI0001695594 Flagellar hook capping protein n=1 Tax=Pa... 87 6e-16 UniRef50_Q5DY16 Lateral flagellar rod protein (FlgD-like) n=8 Ta... 87 6e-16 UniRef50_B0THA9 Flagellar hook capping protein, putative n=1 Tax... 87 6e-16 UniRef50_B8CYR3 Flagellar hook capping protein n=1 Tax=Halotherm... 87 7e-16 UniRef50_C0Z6Q7 Putative uncharacterized protein n=1 Tax=Breviba... 86 7e-16 UniRef50_UPI00016996F7 flagellar basal body rod modification pro... 86 8e-16 UniRef50_B5YIG3 Flagellar hook capping protein n=1 Tax=Thermodes... 86 9e-16 UniRef50_C0GJH6 Flagellar hook capping protein n=1 Tax=Dethiobac... 86 9e-16 UniRef50_B2S3W7 Flagellar hook assembly scaffolding protein n=2 ... 86 1e-15 UniRef50_C6PPE7 Flagellar hook capping protein n=1 Tax=Clostridi... 85 1e-15 UniRef50_B0K1S4 Flagellar hook capping protein n=9 Tax=Thermoana... 85 1e-15 UniRef50_B7J1L2 Flagellar hook capping protein n=21 Tax=Borrelia... 85 2e-15 UniRef50_C9LSP2 Flagellar hook capping protein n=1 Tax=Selenomon... 85 3e-15 UniRef50_D1C163 Flagellar hook capping protein n=1 Tax=Sphaeroba... 84 3e-15 UniRef50_B1YI97 Flagellar hook capping protein n=1 Tax=Exiguobac... 84 3e-15 UniRef50_Q3ADD8 Flagellar hook assembly protein n=1 Tax=Carboxyd... 84 4e-15 UniRef50_UPI00016C0DB7 flagellar hook assembly protein n=1 Tax=E... 84 4e-15 UniRef50_UPI0001BCF0E6 flagellar basal body rod modification pro... 84 4e-15 UniRef50_A1HN34 Flagellar hook capping protein n=1 Tax=Thermosin... 84 4e-15 UniRef50_C0QVF9 Flagellar hook capping protein n=2 Tax=Brachyspi... 84 4e-15 UniRef50_A3DCN1 Flagellar hook capping protein n=3 Tax=Clostridi... 83 6e-15 UniRef50_A6TRQ2 Flagellar hook capping protein n=1 Tax=Alkaliphi... 83 6e-15 UniRef50_C1TKJ1 Flagellar hook capping protein n=1 Tax=Dethiosul... 83 7e-15 UniRef50_Q18CZ5 Putative basal-body rod modification protein n=5... 83 8e-15 UniRef50_A0Q029 Flagellar hook assembly protein FlgD n=3 Tax=Clo... 82 1e-14 UniRef50_D1B6B9 Flagellar hook capping protein n=1 Tax=Thermanae... 82 1e-14 UniRef50_C5RFU5 Flagellar hook capping protein n=1 Tax=Clostridi... 82 1e-14 UniRef50_B8FTP2 Flagellar hook capping protein n=2 Tax=Desulfito... 82 2e-14 UniRef50_B7GGB3 Flagellar hook capping protein n=3 Tax=Bacillace... 82 2e-14 UniRef50_Q8EQX6 Flagellar hook assembly protein n=1 Tax=Oceanoba... 82 2e-14 UniRef50_Q893Y6 Putative basal-body rod modification protein flg... 82 2e-14 UniRef50_P96970 FlgD (Fragment) n=1 Tax=Proteus mirabilis RepID=... 81 3e-14 UniRef50_B0SF84 Endoflagellar hook capping protein n=2 Tax=Lepto... 81 3e-14 UniRef50_Q9WW43 Flagellar hook assembly protein FlgD n=5 Tax=Tre... 81 3e-14 UniRef50_Q97H57 Flagellar hook assembly protein FlgD n=1 Tax=Clo... 81 3e-14 UniRef50_A1UTS5 Flagellar hook capping protein n=1 Tax=Bartonell... 80 5e-14 UniRef50_C6D2W6 Flagellar hook capping protein n=1 Tax=Paenibaci... 80 5e-14 UniRef50_Q2NR91 Putative flagellar hook formation protein FlgD n... 80 5e-14 Sequences not found previously or not previously below threshold: >UniRef50_D0MGC4 Flagellar hook capping protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGC4_RHOM4 Length = 230 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 103/235 (43%), Gaps = 13/235 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M + D ++ S+ + + +FL LLV QL+ QDP NP+++ E +Q Sbjct: 1 MPSLIAPIDEIRQQALQSTPSAPAPPSQELDKEAFLRLLVTQLRYQDPINPLDSREFAAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQS----LQASNLIGHGVMIPGTTVLAGTGSEEG 116 LAQ STV + +N TL + S A+ L+G + A Sbjct: 61 LAQFSTVEQLIGINETLAAQSDAYAALAQGIHNSVAAGLVGKVI-------EAEGDRLTW 113 Query: 117 AVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN 176 PF +EL AA +V+ I ++ G VVRTI +G AG H+ WDG G P Sbjct: 114 GGEDPVPFRIELGDAAQQVSIQIRNEAGEVVRTIFLGSKAAGEHAVEWDGKNDAGEALPA 173 Query: 177 GSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G+Y + + A++ G + A+ V V G G L +G + + VR + Sbjct: 174 GTYTIEVLATDADGDPVAARSFVRGRVTRVTFGPEGILLWIGD-RSVPMQSVRGV 227 >UniRef50_C0GT27 Flagellar hook capping protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT27_9DELT Length = 241 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 8/216 (3%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 + A + FL LL+ QL+NQDP +PM++ E +QLAQ S++ + ++ Sbjct: 18 ANNDIPRDEDPAELGKMDFLKLLITQLENQDPLDPMDDKEFVAQLAQFSSLEQLTNISEG 77 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 + S++ + L A IG + A + + L+ A + Sbjct: 78 MESMNENQARQEMLGAVGFIGKEIR-------ADGDGISKDGSGASKIFYNLEDTAQNLY 130 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQ 195 I D+NG +VRT++ +G + F WDG DG+ AP+G+Y+V+ISA G ++ Sbjct: 131 FNIYDENGNMVRTVEKSARQSGDYEFEWDGLNFDGAEAPDGNYSVSISAEGPNGEPVMVN 190 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V GV + L L +V +++ Sbjct: 191 TEMTGRVSGVQDKDGQPHLRLSDGRMLRFADVSEVV 226 >UniRef50_Q2Y9E5 Flagellar hook capping protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9E5_NITMU Length = 222 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 8/229 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + T PT+ + + S DLQ FL LLV Q+KNQDP NP++N ++T+QLA Sbjct: 2 STIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQLA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 QISTV+G+E+LN T+ +I+ QSLQA+ +IG V++PG+ + G+ Sbjct: 62 QISTVNGVERLNATIRTIADSFTAGQSLQAAGMIGREVLVPGSALQLANGAARFG----- 116 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +EL Q AD+V I D G ++ +++G AG WDG +DGS A NG+Y+++ Sbjct: 117 ---IELTQPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTSDGSQAANGNYSIS 173 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A G ++ Q L A+VQGV +GN G LD+G G L ++RQI Sbjct: 174 VAALRGDQKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF 222 >UniRef50_B4UFG0 Flagellar hook capping protein n=3 Tax=Anaeromyxobacter RepID=B4UFG0_ANASK Length = 225 Score = 166 bits (419), Expect = 6e-40, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 9/226 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T+ + G + + +++A + +FL LL QL++QDP +PM++ +QLAQ Sbjct: 2 STSPVTSALGALPQAGQAPAPASSALGKDAFLKLLTTQLQHQDPLSPMDSQAFVAQLAQF 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V + L L +++ +S L + L+G V+ V G F Sbjct: 62 SSVEQLGALGDKLDTLAMAQASSNQLGTAALVGKEVLFRADRVRLDPG-------GPARF 114 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 V L A + A + D +G VVRT+ +G AG +WDG G P G Y + +S Sbjct: 115 EVTLPAEAGEAVAILADASGRVVRTLQLGARDAGTFQVSWDGRDASGEPLPAGDYLLTVS 174 Query: 185 ASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 A+ GT L A V GV N L + L +V Q Sbjct: 175 ATRTDGTALDAATSLRGTVTGVTFENQAPELLV-GGRHVKLSDVLQ 219 >UniRef50_C1DC22 Flagellar hook capping protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DC22_LARHH Length = 239 Score = 164 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 8/239 (3%) Query: 1 MSIAVTTTDPTNTGVST-TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M+ AV T T + +++ T S A ++Q FL LL+ QL+ QDP NP++N ++TS Sbjct: 1 MTTAVNPTSSTEDPFAGINGTNTKTKSEADEIQDRFLKLLITQLQTQDPLNPLDNYQMTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQIS+V GIEKLN+++ +++ SQ+ A+ +IGH +I G+ +L Sbjct: 61 QMAQISSVQGIEKLNSSVSALTEAYAASQAFAAAGMIGHVSLIEGSHMLLTYAEGTEVDA 120 Query: 120 -------TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGS 172 G+ L AD+VT + + +G +V ++ +G G+ F+WDG +DG Sbjct: 121 DGNKIKVPIAQGGISLPDGADEVTIKVYNSDGELVDSVTMGAQQPGISHFSWDGKGSDGE 180 Query: 173 TAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 P G Y+ ++ A GG A+PL FA + + N L L T + ++R+++ Sbjct: 181 PLPEGMYSFSVEAKKGGNTATAKPLGFARIDALTWENGSPKLILSTGQKISPSDIRELL 239 >UniRef50_Q3SIE0 Flagellar basal-body rod modification protein FlgD n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIE0_THIDA Length = 221 Score = 163 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 8/229 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ + + ++ + S ++D Q FL+LLVAQ+KNQDP NP++N E+TSQ+A Sbjct: 1 MSTVQDASSVGSLFGAEAAKTSKSGSSDTQDRFLSLLVAQMKNQDPLNPLDNAEVTSQMA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+STV GIE +N +L +++ + SQ QA+NLIGH V G+ G Sbjct: 61 QLSTVEGIENMNKSLEALASSMGASQMSQAANLIGHAV--------LVPGNAVGPGQLEN 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 G EL + ADKVT I D G +VR++D+G AGV+ WDG G+ AP G+Y+ Sbjct: 113 LMGFELTRPADKVTLDIHDAGGNLVRSVDLGPRDAGVNVVAWDGLTGSGAVAPAGAYSFK 172 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +SA GG + L LV V + + G L+L G+ ++R+I Sbjct: 173 VSAVQGGQAQSSIALNVGLVNSVSQNSEGVQLNLAGNGSVGYADIREIF 221 >UniRef50_A9IKQ3 Basal-body rod modification protein FlgD n=5 Tax=Bordetella RepID=A9IKQ3_BORPD Length = 231 Score = 163 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 103/228 (45%), Positives = 141/228 (61%), Gaps = 1/228 (0%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T + T++ + S + ++A LQ FLTLLV QLKNQDP NPMEN ELTSQLAQI Sbjct: 2 TTVNNSTDSTGLALAQSGVGANSAQSLQDRFLTLLVTQLKNQDPLNPMENAELTSQLAQI 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 STV GI L TL +ISGQID SQS+ A ++IG GV+IPG + GT + + + TPF Sbjct: 62 STVEGITNLKNTLLAISGQIDVSQSMNAVSMIGKGVLIPGEKISLGTDASDPSKRVATPF 121 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 G++LQ A KV+ I D +GAVVR+ ++GE GV + WDGT G +G Y V +S Sbjct: 122 GIDLQGDAAKVSVKILDASGAVVRSFELGEQDTGVLTLDWDGTNDGGQALVDGKYTVKVS 181 Query: 185 ASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 A++ G ++ A+ L + V V G LDLG G ++ +VR+++ Sbjct: 182 ATDADGKKVQAETLTYGKVNSVSYSTDGLRLDLGLAGQISMLDVRKVL 229 >UniRef50_C6C0W1 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0W1_DESAD Length = 242 Score = 162 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 8/225 (3%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 ++ + ++S+ Q FL LL+ Q++NQDP NPME+ E +Q+AQ S++ Sbjct: 7 SNILGRAEADMAASNQPKHKNQLGQDDFLKLLLTQMQNQDPANPMEDKEYMAQMAQFSSL 66 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 + ++N+ + ++ Q + A IG V G ++ G Sbjct: 67 EQLTQVNSNIKTMIDNNAQDQMVSAVGFIGKEVKAEGYSISRDNGKISKV-------FYG 119 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 L + I D N +VRT+ +G G F WDG G P+G Y +A++A + Sbjct: 120 LGEPVANAFINIYDNNKNLVRTVQLGSKAEGTFEFEWDGKNWAGKDVPDGVYTIAMAAED 179 Query: 188 G-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 G+ ++ + V GV+ L L +R+++ Sbjct: 180 AEGSPVMVKTEVSGEVSGVVSEGGQQYLHLKDGRYINFLNIREVV 224 >UniRef50_C6BXM0 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM0_DESAD Length = 220 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 8/226 (3%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 D T S +++ + + +FL L V QLKNQDP NPM+N E +QLAQ ST Sbjct: 1 MIDTTAYLNSVNKNATPKTPSKDLNKDAFLKLFVTQLKNQDPVNPMDNKEQLAQLAQFST 60 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V + ++ + ++ ++ L A+ IG VM G + + + Sbjct: 61 VERLTNISKAMDGLTKTVNAMMGLNATGYIGKTVMAKGFG-------VSKKGSDISSANI 113 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA- 185 L A V I DK+G ++R++++G AG F WDG +G+ A +G YN+AI A Sbjct: 114 SLPAACKTVYVDIYDKDGGLIRSVELGSKDAGKFDFKWDGKDKNGNDAEDGQYNIAIRAE 173 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++ G +++A ++ V N L+L L V +++ Sbjct: 174 TSKGKKVLATTEVSGKIKAVNMAGGQNVLELEDGRKVLLSNVTRVV 219 >UniRef50_D1U8I5 Flagellar hook capping protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U8I5_9DELT Length = 247 Score = 160 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 8/232 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M TT ++S+ S A+ Q+ FLTLLVAQL +QDP NPM++ ++TSQ Sbjct: 1 MGYTDTTGVYIGAQEDRLAASNTPTSKASLGQADFLTLLVAQLTHQDPLNPMQDTDMTSQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S++ + K+N + S++ + S L A++ IG + G + G+ Sbjct: 61 LAQFSSLEQLTKINDGVQSLNTVMGKSDLLSAASYIGKDIKAEGYKISVAEGNAS----- 115 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 ++ ++ I D GA+VRT+++G AG + + WDG G+ +G+Y Sbjct: 116 --TIYYGFGESVTEIFMNIYDSEGAIVRTVELGSKEAGTYQYKWDGRDESGNLVDDGTYG 173 Query: 181 VAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V I + GG ++ Q V V+ + L L + V++I+ Sbjct: 174 VGILGKDAGGKAVMVQTEISGTVDAVVNESGTQYLRLKDGRFVSFLNVKEIV 225 >UniRef50_Q0AA88 Flagellar hook capping protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AA88_ALHEH Length = 222 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 10/227 (4%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 +G + + + Q FL L++ QL+NQDP NPME+ E SQ+A +T Sbjct: 2 NISGAGSGDYSRAQPTQREPAGELGQDDFLKLMITQLQNQDPMNPMESGEFMSQIASFTT 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 SG+++L + + +Q+LQA++L+G V++ V Sbjct: 62 ASGMDQLQKSFSEFQQDMRANQALQAASLVGREVLVETDAGRL-------PADGEMTGIV 114 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +L A I + G VRT+ GE +G + F WDG DG T P G+Y V S Sbjct: 115 QLPSAVANANIHIHNAAGERVRTLATGEQPSGDYRFAWDGRADDGRTLPPGAYRVTASTQ 174 Query: 187 NGGTQLVAQPLQFALVQGVIRGNS---GNTLDLGTYGTTTLDEVRQI 230 G + + + A V V G ++L G L ++R++ Sbjct: 175 VEGEERSLRVMNSAPVVSVTLAGENERGPRVNLDGIGEMALSDIRRV 221 >UniRef50_Q3J8L2 Flagellar hook capping protein n=2 Tax=Nitrosococcus oceani RepID=Q3J8L2_NITOC Length = 226 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 9/233 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M A ++ + N FL L+ AQL NQDP PM+N+ SQ Sbjct: 1 MVTATPSSSEIYKDLGLVRPPDKKAQNTELGLEQFLKLMTAQLSNQDPFEPMDNSTFLSQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ TV GI+ L + +SG + ++Q+LQAS L+G V++P G Sbjct: 61 VAQFGTVKGIQDLQASFQEVSGSLQSNQALQASGLVGRSVLVPSAESSLEAG-------G 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + VEL I D+ G +VRT+D+G G FTWDG DG+ A G Y Sbjct: 114 SIRGAVELPSGVASPQLKIFDQAGQLVRTVDLGADQTGTVQFTWDGFKEDGTPATPGRYQ 173 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNS--GNTLDLGTYGTTTLDEVRQII 231 + G V V+ G G TL+L G+ +++QI+ Sbjct: 174 FKVEGVTEGGAQGFPTFAAVRVDSVVIGEGSEGLTLNLAGQGSVPFSQIKQIL 226 >UniRef50_C6HWM8 Flagellar hook capping protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWM8_9BACT Length = 278 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 9/214 (4%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + S+ ++ +++ QL+ QDP +PM+N + SQLAQ S + + +N + Sbjct: 22 SPSALPPPQKKKLGMEDYMNIMIRQLQYQDPFHPMDNRKFASQLAQFSQLDQLVHMNKKM 81 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ Q + +LQ +G V + G + G E L + A T Sbjct: 82 EGMANQGRETDALQMVGFLGREVFLKGNRFIKGEHQEA-------TLVFHLDRPAHNATV 134 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT-QLVAQP 196 + +VR+ +G + AG WDG GS AP G Y + A + + A P Sbjct: 135 YVYGAKHQLVRSFKVGPMDAGDQHVAWDGLSNKGSKAPAGGYEFEVVARDAKNRPVPASP 194 Query: 197 LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L+ +V GV+ + L++ L ++ + Sbjct: 195 LRTGVVTGVVFSGTKPLLEV-NGERVDLGQITHV 227 >UniRef50_Q0AJ54 Flagellar hook capping protein n=2 Tax=Nitrosomonas RepID=Q0AJ54_NITEC Length = 223 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 84/231 (36%), Positives = 120/231 (51%), Gaps = 8/231 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS + + S S D+Q FL LLV Q++NQDP +PM+N E+TSQ Sbjct: 1 MSQVQNNSSVSELLTSNGGSIKTARKGDEDMQERFLKLLVTQMQNQDPLSPMDNAEVTSQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQISTVSGI+KLN+TL + D +S +A+N+IG V++PG + Sbjct: 61 MAQISTVSGIDKLNSTLEKLVSDSDARRSFEAANMIGRSVLVPGADMQLE--------NH 112 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 T G EL + DK+ TI D G VR ID+G AGV +F WDG +G+ A G Y+ Sbjct: 113 TGIGGFELTEPVDKLVVTIKDSAGIAVRDIDLGTQPAGVGTFAWDGLANNGNEAAGGQYS 172 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 A+ A ++ A L F V G G L++G G + ++++I Sbjct: 173 FALKAVRSNQEVAASTLAFGSVSSAQAGKEGALLEVGRLGYVGMHDIKKIF 223 >UniRef50_B7UXB0 Flagellar basal-body rod modification protein FlgD n=6 Tax=Pseudomonas aeruginosa RepID=B7UXB0_PSEA8 Length = 237 Score = 157 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 9/231 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + G T + ++ + FL LLVAQLKNQDP +P +N E +QL Sbjct: 12 NTGNVNGSKRAAGSGATETGQSVKGSSNLGKDEFLKLLVAQLKNQDPMSPQQNGEFIAQL 71 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ STV G++ LN ++ SI +SQ+LQAS+L+G V++ + T T Sbjct: 72 AQFSTVEGVQSLNKSMESILSNYQSSQALQASSLVGRKVIVATDKSVVDT-------KDT 124 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 + L ++ V + D G VV I++G+ AG SF WDG + G+ P G+Y Sbjct: 125 FKASLNLPVSSSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKF 184 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 S G Q A V V G L+L G+ L +V+ I Sbjct: 185 EAQTSIDGKTYGLQTYLPANVDSVTLGQNGGELMLNLAGLGSIALSKVQII 235 >UniRef50_A1WUE3 Flagellar hook capping protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUE3_HALHL Length = 293 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 9/231 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S A + + + + G + FL L++ QL+NQDPT+P + ++ Q+ Sbjct: 69 SAAKSGYEALPEDLRSIPEDKDEGDPQSIGHEDFLELMMVQLQNQDPTDPQDTEQMMGQI 128 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ +T SGIE+L + + + QSL+AS L+G V+ Sbjct: 129 AQFTTASGIEQLQSDFREFFEHMRSDQSLRASQLVGREVVTESRQAYL-------PEDGE 181 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 ++L+++A +T I + G V +GE+ G H F WDGT DG P G+Y V Sbjct: 182 MEALLQLERSAPNLTVEIENAAGERVHREQLGEMEEGEHPFAWDGTNNDGQRLPQGTYQV 241 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 +G + L A V V G G L + G +L +V++I Sbjct: 242 NAYVEDGDEREPVPTLVGAPVTSVSVGMDGRPPELSVAGLGEMSLSDVKRI 292 >UniRef50_Q1QW30 Flagellar hook capping protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QW30_CHRSD Length = 235 Score = 155 bits (392), Expect = 9e-37, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 148/230 (64%), Gaps = 2/230 (0%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S + + + T ++ + + ++ DL + F+TLL+ QL+NQDPT PM+N+++T+QL Sbjct: 8 SNTLASINSTPNANASNETRTTGAESSEDLNNRFMTLLITQLQNQDPTKPMDNSDMTAQL 67 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQI+TVSGI++LN +LG I+ QID ++LQAS+LIG GVM+PG+ G E Sbjct: 68 AQINTVSGIQELNDSLGDINEQIDAGKTLQASSLIGQGVMVPGS--TVRVGETEDGGVVA 125 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 TP G EL AD++ TIT+ +G VV + +GV SF W GT DG+ G+YNV Sbjct: 126 TPLGAELATGADELEITITNGSGEVVHRSVEENVPSGVQSFDWPGTGLDGNAVAEGAYNV 185 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A GG ++ PL +ALVQGV G++G TLDLGT + L++VRQI+ Sbjct: 186 EMTARVGGEEVSVTPLNYALVQGVTSGDNGPTLDLGTSDSVALEDVRQIL 235 >UniRef50_B8GQB0 Flagellar hook capping protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQB0_THISH Length = 226 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 105/231 (45%), Gaps = 10/231 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S + + D N T+ ++ T + QS FL L++ QL+NQDP PME+ E QL Sbjct: 3 SASAISADIMNKLGLTSHETANTKGDDRLGQSDFLRLMITQLENQDPFKPMESGEFLGQL 62 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ TVSGIE L + S I + Q+LQA+ L+ V +PG ++ Sbjct: 63 AQFGTVSGIEDLQKSFNRFSQSIASGQALQAAALVDRHVTVPGDMIIMDP--------AE 114 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 G A+ +V + ++ G +VR I +G AG+ F WDG G+ G Y Sbjct: 115 GMRGAVQVPASAEVVIGVYNQAGQLVRRIPMGIQEAGLREFHWDGRDETGTLLAPGIYEF 174 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 A AS+G A V+ V G N L + G ++VRQI Sbjct: 175 AGLASDGRGTEALDMHLSARVESVSLGNNNGALLLQVEGMGEVNFNKVRQI 225 >UniRef50_C4KAU5 Flagellar hook capping protein n=2 Tax=Rhodocyclaceae RepID=C4KAU5_THASP Length = 224 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 9/232 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSS-FLTLLVAQLKNQDPTNPMENNELTS 59 MS D + ++ ++ + ++A+ +S FLTLL QLKNQDP NPMEN E+TS Sbjct: 1 MSSVTNNQDIAASVLAKINTREESKASASGDMNSRFLTLLTTQLKNQDPLNPMENAEVTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 QLAQ+STV GIE+LN S S+QA+ L+G GV++ G + G Sbjct: 61 QLAQMSTVDGIERLNKMFQSFVDGQSAYDSMQAAALVGRGVLVEGKKLTLTEAGAVGG-- 118 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 EL AAD V +I D G ++ I++ ++ AG +F WDGT +DGS A +G+Y Sbjct: 119 ------FELDAAADSVVLSIKDAAGLEIKKIELADVKAGSQNFIWDGTASDGSRAVDGAY 172 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V +SA G ++ + L+F V VIRG SG +G+ G D+++QI+ Sbjct: 173 TVELSALAEGKKVTGRTLEFGPVTSVIRGASGTDFQVGSLGIFKYDDIKQIL 224 >UniRef50_C5CXV4 Flagellar hook capping protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXV4_VARPS Length = 228 Score = 154 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 96/229 (41%), Positives = 137/229 (59%), Gaps = 1/229 (0%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A++ T + + T++SS + AD + FL LLV QL NQDP NPMEN ELTSQLA Sbjct: 1 MAISDTSSISGLNAATAASSAGNVSGADSEQRFLKLLVTQLNNQDPLNPMENAELTSQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+STVSGIE+LNT L + Q +Q LQA++LIG+ V+ PG + A Sbjct: 61 QMSTVSGIERLNTALSGLVNQTGANQVLQAASLIGYNVLSPGNALSTSEPKAGEAPAAVP 120 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V+L A V I + G VRT+ +G +T GV++ +WDG DGSTAP G+Y+ + Sbjct: 121 FA-VQLPATAGTVEVKIVNAAGNTVRTLTLGPMTEGVNAVSWDGKADDGSTAPAGAYSFS 179 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A+N GT++ A L F+ V V +G SG TL+L + + L +VR + Sbjct: 180 VAAANNGTRVEATSLVFSQVAAVKQGASGVTLELMSGQSIGLADVRMFL 228 >UniRef50_B9ZPV2 Flagellar hook capping protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPV2_9GAMM Length = 223 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 8/214 (3%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 + G QS FL L+ QL+NQDP PMEN E Q+AQ STV+GIE+L+ + Sbjct: 15 SRQQKDEGPADRLGQSDFLKLMTTQLQNQDPFEPMENGEFIGQMAQFSTVTGIEELSKSF 74 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ + SQ+LQA++L+G V++P GT VEL Q+ ++ Sbjct: 75 EKLAQSMGQSQTLQAASLVGKDVLVPTDFSELGTD-------GMVRGAVELDQSTGQLQV 127 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 + G +R++++G + G+ FTWDG DG+ A G Y SA +G + Sbjct: 128 EVYSPTGERIRSMNLGSASEGLQEFTWDGMRDDGTPAAPGVYEFRASAQSGSSSESVDVF 187 Query: 198 QFALVQGVIRGNSGNT-LDLGTYGTTTLDEVRQI 230 A V+ V G+ + L + G +VR+I Sbjct: 188 LDARVESVSVGDDSSLGLMVRGLGEINFSDVRRI 221 >UniRef50_Q1MQV6 Flagellar hook capping protein n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQV6_LAWIP Length = 279 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 88/225 (39%), Gaps = 8/225 (3%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T+ + S T S + + FL LLV Q K QDP NPME+ E +QLAQ S + Sbjct: 3 TNGASGVSSATGIFSQQAGKSELGKEDFLKLLVTQFKYQDPLNPMEDKEFIAQLAQFSAL 62 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 N + S+ Q + A++ IG V G V + V Sbjct: 63 EQQMSTNEKMESLLNLQTQQQMISAASFIGKEVAARGYGVSVKGDTISNIQYAINEEMV- 121 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 K I D + ++ T+ + G+H F WDG L +GS +G Y V I+ N Sbjct: 122 ------KGYVNIFDASNQLITTVQLDSKAPGIHDFDWDGLLPNGSKVSDGVYTVNIAGQN 175 Query: 188 -GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 G ++ V+ V L L L VR+++ Sbjct: 176 SAGAPVLVDTSVSGKVEAVTMYQGDQLLRLSDGRLVALSNVREVV 220 >UniRef50_C7LRK4 Flagellar hook capping protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRK4_DESBD Length = 226 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 8/213 (3%) Query: 20 SSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGS 79 + N + +FL LLV QL+NQDP NP+++ E +QLAQ S++ + ++ + Sbjct: 14 GADTAAKNDVLGKDAFLKLLVTQLQNQDPLNPLDDKEFIAQLAQFSSLEQMTNISEGIKG 73 Query: 80 ISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATI 139 +S + L A N IG V A + TP L AA +V A + Sbjct: 74 LSDKTAQQDMLSAVNYIGKEV-------TASGDGITKSGNYVTPVYFTLGGAAAQVYANV 126 Query: 140 TDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQ 198 D+N +VRT + AG +FTWDG +G++A +G YNV SA + G + Sbjct: 127 YDENNNIVRTEKFTSMQAGEFAFTWDGLDYNGNSANSGQYNVYFSAESPTGATVFVDTEV 186 Query: 199 FALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 V + +G+ L + +++++I Sbjct: 187 SGTVTALEQGDGETFFRLSDGRKISFSDIKKVI 219 >UniRef50_A4G6B2 Basal-body rod modification protein FlgD n=2 Tax=Oxalobacteraceae RepID=A4G6B2_HERAR Length = 225 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 92/228 (40%), Positives = 125/228 (54%), Gaps = 8/228 (3%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 TT P +S+ S A + Q FLTLLV Q+KNQDP NP++N ++TSQLAQ Sbjct: 6 NNTTVLPQALLDQMNGTSAAKKSTAEEAQDRFLTLLVTQMKNQDPLNPLDNAQVTSQLAQ 65 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 +STV+GI+KLN TL S+ G ++Q+LQA+N+IGHGV+ PG+ + Sbjct: 66 LSTVTGIDKLNGTLESMMGSYQSNQALQAANMIGHGVLAPGSNISLTENKGLMG------ 119 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 VE Q D + D G V+ TID+G AG WDGTL DGS A +GSY + Sbjct: 120 --VEFPQDVDAAEILVKDAAGNVIHTIDLGAHPAGTVPLLWDGTLADGSKAEDGSYQFEV 177 Query: 184 SASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 AS G + A LQF +V V G +++ G L ++RQI+ Sbjct: 178 KASLAGKPVSANALQFGIVTTVSTSPGGVQINVPGLGALNLADIRQIL 225 >UniRef50_A6GSX8 Flagellar hook capping protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSX8_9BURK Length = 223 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 10/232 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+I VT+ N+G + + S A Q F++LLVAQLKNQDP PM+N ++TSQ Sbjct: 1 MTIDVTSALGNNSGTTAAKKKTDENSPEAI-QERFMSLLVAQLKNQDPLAPMDNAQVTSQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ++TV+GI LN T+ ++ I+ +Q++QA++++G V+ G + G G++ Sbjct: 60 MAQLNTVTGINTLNATMEGVAASINANQTVQATSMLGRAVLTEGNDLKLVDGKAVGSM-- 117 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 EL Q+AD + + D VVRTI++G + G H F WDG DGST P G+Y Sbjct: 118 ------ELNQSADILRVNVLDAGANVVRTIELGPQSKGTHEFEWDGKSNDGSTLPAGNYK 171 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQII 231 I A G PL ++VQGV G G L T +++Q+ Sbjct: 172 FEIEAKAAGKDASVTPLTLSVVQGVRNAGAEGTKLLTSNGSEITFADIKQVF 223 >UniRef50_Q2SDU0 Flagellar hook capping protein n=4 Tax=Gammaproteobacteria RepID=Q2SDU0_HAHCH Length = 225 Score = 153 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 8/231 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS T ++ ++ F+ L++AQL NQ P +P +N +Q Sbjct: 1 MSDINTANQTSDALSQYALQQKSANRKNELGKNEFMDLMIAQLNNQSPLDPQDNTAFVAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S+V GI+ LN+T+ +++ Q ++Q+LQAS ++G V+ P + + Sbjct: 61 LAQFSSVEGIQSLNSTVDTMASQFRSAQALQASAMVGRDVLAPMESAIKSAD-------G 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + VEL ++T ++ ++ G ++ ID G G F+WDG ++G T P G Y Sbjct: 114 SINGVVELPAGTSQLTISVYNEAGELITNIDKGYQPGGDVKFSWDGKNSNGETLPAGRYE 173 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQI 230 V A G Q+ A V V + G TL+L G+ L +++QI Sbjct: 174 VVARARYSGEQMQVSSYLAANVDSVSIARDGGVTLNLAGLGSVGLSDIKQI 224 >UniRef50_C6MIR9 Flagellar hook capping protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIR9_9PROT Length = 222 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 9/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + + T++ T +A + Q FL LL+ Q+KNQDP P++N E+TSQLA Sbjct: 1 MTSVQAADSQSISAGTTAGIKTKKDAENPQDRFLKLLITQMKNQDPLKPLDNAEVTSQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 QISTV+GI+KLN+TL + D+ +S++A +IGH +PG ++ Sbjct: 61 QISTVTGIDKLNSTLQQLVSSADDGRSIEALEMIGHSAYVPGKSITLEGEGA-------- 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 G+EL Q+ DK T TI D +G +R +++G AGV + WDG G+ A G Y Sbjct: 113 IAGIELAQSVDKATVTILDSSGIAIRKMELGVQPAGVSTIAWDGMTDSGTQAAPGDYTFE 172 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGT-YGTTTLDEVRQII 231 ++A G + L F V V G G LD+G G +L +V+Q+ Sbjct: 173 VTAKQGDKDVKVNTLSFGTVNSVSHGELGTFLDMGKVLGLVSLSDVKQVF 222 >UniRef50_Q1JZT2 Flagellar hook capping protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZT2_DESAC Length = 222 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 9/228 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + SS+L+ A + FLTL+V QLKNQDP NP + E T+QLA Sbjct: 1 MMAEVGSTNAASSNAQLSSALSSGANALGKQDFLTLMVEQLKNQDPMNPSDATEFTAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S++ + +N L S+ Q L A LIG V+ + G+ + Sbjct: 61 QFSSLEQLFNVNDNLESMGNTSAEVQRLSALALIGTDVVTASSEFEFSGGAVQFG----- 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +L A + + I + G V T ++ E +G H WDGT +G P+G+Y + Sbjct: 116 ---YDLDGPASEGSLYIRNAAGDTVATYELTETGSGRHFLAWDGTDNNGKALPDGTYTLG 172 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +SA NG + A + + V GV + + L + G +L EV + Sbjct: 173 VSAFNGDDAVAATSMIRSRVVGVDLVDGADVL-VTDSGNFSLAEVESV 219 >UniRef50_B6AMC0 Probable flagellar hook capping protein FlgD n=2 Tax=Leptospirillum sp. Group II RepID=B6AMC0_9BACT Length = 276 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 9/209 (4%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 FL L+++QL+ QDP +P+ N +QLAQ S + + LN +G+I+ Sbjct: 26 APPPRQKLGMGDFLHLMISQLQYQDPLHPLNNTRFAAQLAQFSQLDQLTHLNRGVGTIAH 85 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 ++ + +G V + G A+ I D Sbjct: 86 DGADANKMMMVGFLGQRVTMKGNAFRLDPS-------GNVSLTYRQAGASQSGHLRIFDG 138 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG-TQLVAQPLQFAL 201 +VRTI + + G H+ WDG G AP GSY+ I A +G + A P++ Sbjct: 139 QNHLVRTIALKPMGPGSHTLEWDGVTDQGVRAPKGSYSFEIDAMDGRHRPVAATPVETGT 198 Query: 202 VQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V G++ L++ ++ + Sbjct: 199 VTGILFEKGQPVLEV-DGKPVAFGDISHV 226 >UniRef50_A1VDY6 Flagellar hook capping protein n=5 Tax=Desulfovibrio RepID=A1VDY6_DESVV Length = 265 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 8/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + + S+ NA + +FL LLV QLK+QDP NPM++ E +QLA Sbjct: 1 MGTSVNNILGQAENEFQSAVKKSGNADLGKDAFLQLLVTQLKHQDPLNPMDDKEFVAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q +++ + +NT + S++ Q + A + IG V+ A + Sbjct: 61 QFTSLEQLMGINTGVTSMNEAFKQQQMMNAVSYIGKDVL-------ASGDQISKIKDGVS 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + + + I + + +VR+ I AG + + WDG G+ +G Y VA Sbjct: 114 KLYFSIDEPITQGVINIFNASNELVRSEFISAKQAGDYEYVWDGKDYQGNAMADGLYKVA 173 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A N G ++ V GV N L + + V ++ Sbjct: 174 MAAENDKGKAVLVSTEVSGHVIGVETINGTQYLRMQDGRSVQFMNVSVVV 223 >UniRef50_Q1NVF9 Flagellar hook capping protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NVF9_9DELT Length = 223 Score = 150 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 8/229 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+ + ++ + + + + ++ F+ L + QL+ QDP PM++ E+ SQLA Sbjct: 1 MAIDSMMGPGVPMAEPPNPNKPVGSDSLDRADFMKLFITQLQYQDPMEPMDSYEMASQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S + K++ + + + +LQ LIG + G + G + Sbjct: 61 QFSNMEATMKMSDNMEKLLDYQKSQNNLQLLGLIGKNIETAGNEISMVDGEADRT----- 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 LQ+AA I G +VRT+D+G AG + WDG +G AP+G Y Sbjct: 116 --SYVLQEAAAFNVVYIYGPGGQLVRTLDMGYQGAGKQTLAWDGLDNNGEVAPDGPYTYK 173 Query: 183 ISA-SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + A + G+++ + V G+ T+ + + + ++ ++ Sbjct: 174 VDALTADGSKVEVEQRASGKVTGLDFDTGQATITVNDHAQKGVSDIIRV 222 >UniRef50_Q3JX26 Basal-body rod modification protein FlgD n=56 Tax=Burkholderia RepID=Q3JX26_BURP1 Length = 459 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 133/239 (55%), Gaps = 16/239 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSL-------TGSNAADLQSSFLTLLVAQLKNQDPTNPMEN 54 + TT+ T T+ ++S + ++AADLQ++FL LLV QL+NQDPT+P+++ Sbjct: 211 TSGANTTNGTAGTNGTSGANSGINVASSLSTTSAADLQTTFLKLLVTQLQNQDPTSPVDS 270 Query: 55 NELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSE 114 +++TSQLAQI+TVSGI +LNT L S+S Q+ Q QA+ LIG V+ PG TV +G+ Sbjct: 271 SQMTSQLAQINTVSGIAQLNTALTSLSSQLTAGQQTQAAMLIGSNVLAPGNTVPVKSGAA 330 Query: 115 EGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA 174 PFGV+L A +T T+ + +G VV TI+ G +AG F W T T G+ Sbjct: 331 S-------PFGVQLTSAVSNLTITVKNASGVVVNTINAGAQSAGTVPFNWTPTDTAGNKL 383 Query: 175 PNGSYNVAISASN-GGTQLVAQPLQFALVQGV-IRGNSGNTLDLGTYGTTTLDEVRQII 231 P+G+Y ++ S ++ G Q L A V V + + L L T +V I Sbjct: 384 PDGTYTISASYTDTSGKQYAPTTLSSAQVLSVIKQADGTPGLVLSNGSTVGFSQVASIF 442 >UniRef50_C4XMS4 Flagellar basal-body rod modification protein FlgD n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMS4_DESMR Length = 232 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 8/199 (4%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 +FL LLV QL+ QDP +PM++ E ++LAQ S++ + ++N+ + +S Q Sbjct: 27 LGMDAFLQLLVTQLQYQDPLDPMDDKEFVAELAQFSSLEQLTEINSGIEGLSTLTQEQQM 86 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 + A N IG + GT V G+ L + A + D +G +VRT Sbjct: 87 IGAVNFIGKTIEANGTAVNVEDGAATSV-------TFTLPEDAATCLVNVLDSSGNIVRT 139 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRG 208 +D+G TAG F WDG DG+ +G Y VA++A+N G + V+G+ + Sbjct: 140 VDLGATTAGQVEFEWDGKDYDGNAVDDGQYQVAVTATNADGEVMTVTSTMTGTVEGIQQV 199 Query: 209 NSGNTLDLGTYGTTTLDEV 227 + LD+G ++ Sbjct: 200 SGSYYLDIGGGRYVAFTDI 218 >UniRef50_Q5X5U4 Flagellar basal-body rod modification protein FlgD n=6 Tax=Legionella RepID=Q5X5U4_LEGPA Length = 225 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 9/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + +N+ + + Q FL L+VAQ++NQDP P N E SQLA Sbjct: 1 MTTNSVNGSNSIGGLGLNQIDSDKRQNLGQQDFLRLMVAQVQNQDPLQPQANGEFLSQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q ST GI K+ +L ++ + ++Q+LQAS L+G V++ T+ GT Sbjct: 61 QFSTNDGITKMQESLQQLASSLQSNQALQASALVGRKVLVNSNTLSLGT-------EGDV 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +++ + A I ++G +++TI +G+ G F+WDGT +G Y + Sbjct: 114 KAAIDMAPGVSNLRAAIYTESGELIKTIPLGQPEPGFFQFSWDGTDQSNQRLASGRYTIK 173 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 ++ + GG ++ + + A V V G +G L++ G+ L +VRQI Sbjct: 174 VTGTYGGQEVALKTMTSANVDSVSLGQNGEDLKLNVAGVGSVYLSQVRQI 223 >UniRef50_B4SIL9 Flagellar hook capping protein n=13 Tax=Xanthomonadaceae RepID=B4SIL9_STRM5 Length = 227 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 12/234 (5%) Query: 1 MSIAV---TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNEL 57 M+ AV T D + +S+ T Q+ FL L+ QL++QDP PM+N ++ Sbjct: 1 MTTAVNNQTNQDVYSALGLNAPNSNATKKKNTLDQADFLRLMTEQLQHQDPLKPMDNTQM 60 Query: 58 TSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGA 117 +Q+AQ+STV GI LN T+ + + Q L+ + L+GH V++P ++ Sbjct: 61 VAQMAQMSTVQGITDLNKTVKGFQESMASDQVLRGAALVGHEVLVPSEKLVLEKEGTVEG 120 Query: 118 VTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177 AA VT ITD NGA V ++ + AG +F WDG +G G Sbjct: 121 TVA--------APAAGIVTVDITDANGAKVTSLSVEAKAAGETAFKWDGKDANGKRMEPG 172 Query: 178 SYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y++ + + G A V+ V G+ G L+L GT +D V ++ Sbjct: 173 KYSIVANHVDTAGKSTKLSTFVQAPVESVTVGSDGLYLNLKGLGTAPIDYVLRV 226 >UniRef50_B8FK44 Flagellar hook capping protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK44_DESAA Length = 230 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 10/227 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T+ + + G S+ + + Q FL LL+AQLKNQDP NPME + T+QLAQ Sbjct: 2 TTSINTWSVGAGAYSNPTTESTGTGLGQEDFLQLLIAQLKNQDPLNPMEGTDFTAQLAQF 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S++ + + +L + N+ + L+G ++ ++ G A T Sbjct: 62 SSLEQLFGIGDSLEEMLSIQSNNGTGDVGYLLGKVIVAEDDSLTVNGGLSSSANFTIEED 121 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 V+ +I D G V+TI+ G L AG +S WDG G + +GSY+ +S Sbjct: 122 --------AAVSISIFDSYGIEVKTINAGSLEAGTYSVGWDGRDDSGVSVEDGSYSYEVS 173 Query: 185 ASNGGT-QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A + + + V G+ L LG + + ++ Sbjct: 174 AKDSSGLPVSTYTVVSGEVTGITYEYGAPYLLLGD-QMVSAGSILEV 219 >UniRef50_Q1GZW4 Flagellar hook capping protein n=3 Tax=cellular organisms RepID=Q1GZW4_METFK Length = 228 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 2/229 (0%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + S ++ S ++ Q F+ LL+AQ+KNQDP NPM+N E+TSQ+A Sbjct: 2 TSTPGISDSLLSSMNGSGANNNTSAISETQDRFMKLLIAQMKNQDPLNPMDNAEVTSQMA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+STV+GIEK+N +L + + +Q+LQAS+LIG+ V++ G + E + Sbjct: 62 QLSTVTGIEKMNASLSTFISSMQATQALQASSLIGNTVLVEGNSTYLAP--AETEGESAA 119 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 GVEL ADK+T I + G VV+TI + AG+ S W+G DG+ P+G Y + Sbjct: 120 YLGVELPIGADKLTVNIKNGAGNVVKTITVTNQPAGISSLGWNGYGDDGTKLPDGRYTIE 179 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +A+ G + + + PL + V V G+ G L+L T D+++QI Sbjct: 180 ATATTGNSSVASTPLSYEQVMSVSTGSDGVKLNLSNLAAITTDQIKQIF 228 >UniRef50_A7K5D2 Flagellar basal-body rod modification protein FlgD n=11 Tax=Vibrionaceae RepID=A7K5D2_VIBSE Length = 236 Score = 147 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 10/231 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ D + + + + Q FL+LL QL QDP P+ N+++ +Q+A Sbjct: 10 SGLSYIDQLKSLQESNKKTEESTGKQDLKQEDFLSLLTKQLSQQDPFKPVSNDQMIAQMA 69 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 +TV GI K+NT S++ + ++Q+LQAS+L+G V++PG + Sbjct: 70 SFATVDGIGKMNTQFESLNSSMTSNQALQASSLVGRDVLVPGAAGVKQDD-------APM 122 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V+L Q+ D + + D+ G +VRT ++G AG WDG G+ P G Y V Sbjct: 123 AAMVKLSQSIDNLFVRVEDEAGQLVRTFEVGAKPAGDTRVLWDGKDESGNPLPAGKYKVK 182 Query: 183 ISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGT-TTLDEVRQI 230 S G +A V V+ G+ L+L + + L EV ++ Sbjct: 183 ASGLVEGESQEFPVSTYANVNSVLLGKGDGNVLLNLAGFESPVRLAEVLEV 233 >UniRef50_B9CZX6 Flagellar hook assembly protein n=2 Tax=Campylobacter RepID=B9CZX6_WOLRE Length = 234 Score = 147 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 115/236 (48%), Gaps = 14/236 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSL------TGSNAADLQSSFLTLLVAQLKNQDPTNPMEN 54 M+ + T + T + S+ T NA + +F+ LL+ +L+ QDPT+PM+ Sbjct: 1 MANGLETNNFTVNNQAAKKSADALQKAAGTNPNAQLDKDAFMKLLLTELQYQDPTSPMDT 60 Query: 55 NELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSE 114 ++ +Q +Q++ + E N + ++ Q+ NS ++ A +++G I + ++ G Sbjct: 61 EKMLTQTSQLAALEMQENTNKMMQKLADQLKNSTNMYAVSVLGKMAKIGDSGIIKEEGKG 120 Query: 115 EGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA 174 F L+ AA I D NG +VRT++ GE AG ++F WDG + G+ A Sbjct: 121 -------VNFVGFLESAAKGGKINIRDNNGRLVRTLEFGEAKAGANTFEWDGKDSSGNEA 173 Query: 175 PNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G+Y+V IS + ++ + LV+GV + + + ++D+V++ Sbjct: 174 KAGTYSVEISYVDTAGKVKNGGVGNYLVEGVKFVDGVAQVKV-GGQYVSIDKVKEF 228 >UniRef50_D2L1Z4 Flagellar hook capping protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1Z4_9DELT Length = 235 Score = 146 bits (367), Expect = 7e-34, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 8/230 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ ++ S++SS++ ++++ Q +FL LLV QL+ QDP NPM++ E ++LA Sbjct: 1 MSYASSLLGTDSSSSSSSTTTQKASSSLGQDAFLQLLVTQLQYQDPLNPMDDKEFVAELA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S++ + ++NT + +++ Q Q L A N IG + G V G Sbjct: 61 QFSSLEQLTEINTGIDNLAIQGTQQQLLGAVNFIGKTIEATGNAVSLADGKASAV----- 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 L A+ + D +G VVRT+D+G TAG F WDG +G+T +G Y VA Sbjct: 116 --TFTLPTDAETCLVNVLDTSGQVVRTVDLGATTAGAVEFVWDGKDYNGNTMDDGQYQVA 173 Query: 183 ISASNGG-TQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A++ + VQG+ + N L++G ++ ++ Sbjct: 174 MTATDADSGLIKTSSTMTGTVQGIAQENGTYYLNIGDGRNVAFTDITNVL 223 >UniRef50_Q21IK8 Flagellar hook capping protein n=4 Tax=Gammaproteobacteria RepID=Q21IK8_SACD2 Length = 238 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 20/243 (8%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ T + + +S + + QS+FL L++ QL+NQDP +P EN+E +Q Sbjct: 1 MTEIAATGNSFLSDMSIAKKNPTEPQSNELGQSAFLELMITQLENQDPLSPQENSEFIAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S+V ++KLN S + +Q+LQAS L+G V +P G Sbjct: 61 LAQFSSVESLDKLNNNFDSFANSFVANQALQASTLVGRSVTVPSDRTELKAGGV------ 114 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG------------TL 168 V++ ++ + I+ + G++V I +G AG WDG Sbjct: 115 -VSASVDVPSSSGDILVNISTEGGSLVDQISLGVRPAGELVMRWDGNQMEVNGELLDWQT 173 Query: 169 TDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG-NSGNTLDLGTYGTTTLDEV 227 + + P G+Y +S G ++ A V V G N G TL+L G LD++ Sbjct: 174 SQENGIPPGTYRFDVSTRVDGEEVKLGTALSANVNSVTVGTNGGLTLNLAGIGAVGLDDI 233 Query: 228 RQI 230 +Q Sbjct: 234 KQF 236 >UniRef50_A8F889 Flagellar hook capping protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F889_THELT Length = 219 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 10/217 (4%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 +T +SS + + +FL LL+ QLKNQDP PM+N + +QL Q ST+ I + Sbjct: 8 SYSTYTSSERTPSNTLDKDAFLLLLITQLKNQDPLEPMDNKDFIAQLTQFSTLEQITNMT 67 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 ++ + + Q+++LIG + + G E V A Sbjct: 68 NSIQEFLTLQEGALQAQSASLIGKYATVQANQITVSDGVSE--------SIVFELDEAAP 119 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLV 193 V I D +G ++R L AG H++ WD + G +G+Y +S N G++ Sbjct: 120 VIVRIYDSDGNLIREATSSTLDAGAHAYVWDARDSSGLQVEDGTYTYVVSKLNSDGSETE 179 Query: 194 AQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ ++ V + + + + L + +I Sbjct: 180 IGGIEGGKIESVKFKGNEIYVYI-SGKEYPLASIIEI 215 >UniRef50_A6LMJ0 Flagellar hook capping protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMJ0_THEM4 Length = 221 Score = 145 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 9/208 (4%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 + T+ + G + +FL LLV QLKNQDP P+++ E +Q+ Q+ST+ I Sbjct: 8 NSIYPTNVTRENGIKKELDKEAFLELLVTQLKNQDPLEPLKDREFIAQMTQLSTLEQITN 67 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 ++ ++ + Q S+++G ++ + G+ V + Sbjct: 68 MSESVQKFVESSASLYRAQVSSMVGKYAVVKSNILELKNGNAS--------TQVFKLEEP 119 Query: 133 DKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI-SASNGGTQ 191 V I D+NG +V+ D+G L AG+ +F WDG DG P+G+Y + S G+ Sbjct: 120 SHVILKIYDENGKLVKEEDLGNLNAGMQTFLWDGRNKDGVKLPDGNYTFNLYSVERDGSL 179 Query: 192 LVAQPLQFALVQGVIRGNSGNTLDLGTY 219 + V+ V ++ + + Sbjct: 180 TEISAMDGGKVEAVQFRDNDVYVLVNGN 207 >UniRef50_B7IDJ4 Basal-body rod modification protein FlgD n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDJ4_THEAB Length = 222 Score = 145 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 10/216 (4%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + +++S + +FL LLV QLKNQDP P+++ E +Q+ Q+ST+ I ++ Sbjct: 12 NLSTNSKKQEIKKELDKEAFLELLVTQLKNQDPLEPLKDREFIAQMTQLSTLEQITNMSE 71 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 ++ + QAS+++G ++ + G+ V ++ V Sbjct: 72 SVQKFVESSASLYRAQASSMVGKYAVVKSNVLELSNGTTS--------TQVFKLESPSHV 123 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI-SASNGGTQLVA 194 I D+NG +VR D+G L+ G+ +F WDG DG P+G Y + S G Sbjct: 124 ILKIYDENGKLVRQEDLGNLSEGMQTFLWDGRSDDGVMLPDGKYTFNLYSVQPDGNLEEI 183 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + V+ V ++ + + + + +I Sbjct: 184 SAMDGGKVEAVQFRDNDVYVLV-NGNLYPISSIIEI 218 >UniRef50_C8QYQ2 Flagellar hook capping protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYQ2_9DELT Length = 251 Score = 145 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 9/231 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M++ + P + ++ GS++ + F+TL + QL++QDP PME+ E+ SQ Sbjct: 1 MTMISSGYGPDIPMANQSNHPEPVGSSS-LDRQDFMTLFITQLQHQDPMKPMESYEMASQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S++ +++ + + + +LQ +LIG + G + G Sbjct: 60 LAQFSSMEATMQMSDNMEKLLSYQMSQNNLQLLSLIGKTIETDGNEIGVTDGQVART--- 116 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 L+Q A I D G +VRTID G +AG ++ WDG G+ P+G Y Sbjct: 117 ----SYVLEQDAPFSVVYIHDAAGQLVRTIDNGYQSAGQNTLAWDGKDNSGNLVPDGMYT 172 Query: 181 VAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + A G G+++ + V G+ + + + Y + ++ + Sbjct: 173 YKVDALAGDGSKVAVEQRASGKVTGLEFDSGRAAITVSGYIQKFVSDIINV 223 >UniRef50_A3UFN5 Flagellar hook assembly protein FlgD n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFN5_9RHOB Length = 242 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 89/228 (39%), Gaps = 11/228 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T + S S L + AD +FLTLL QLKNQDP +P+E+ + QL Q Sbjct: 1 MTEVNAAAQTQQAQSQSKLATAGLADNFDTFLTLLTEQLKNQDPLDPLESEQFVQQLVQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V N +L ++ + L+A + IG + L G Sbjct: 61 SSVEQQIASNESLEALLALQQSDAQLKALDFIGKEATVNTRYNLLQDGEAAWE------- 113 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 L Q AD V I D+ G VR +D GE GVH+ TWDG G+T P G Y + I Sbjct: 114 -YGLSQEADSVEILIFDEKGTQVRRLD-GETGEGVHAVTWDGKDQAGNTLPEGVYEIEII 171 Query: 185 ASNGGTQ-LVAQPLQFALVQGVIRGNSGNTLDLGTYGTT-TLDEVRQI 230 A + + V GV + V + Sbjct: 172 AKDADKNAIDYATRVSHRVTGVEMSGGQAQVSFANGELVLPASLVTSV 219 >UniRef50_Q6MHY7 Basal-body rod modification protein flgD n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHY7_BDEBA Length = 334 Score = 144 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 8/216 (3%) Query: 16 STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNT 75 + S N + + +F L++ Q+KNQDPTNP++++E+ +QLA S++ ++ +N Sbjct: 54 TDPSKKVRAVGNPSLDKDAFFKLMLTQMKNQDPTNPLKSHEMAAQLASFSSLEQMQNMNK 113 Query: 76 TLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKV 135 +L + S++ QA NLIG V + V+ GT E L AA +V Sbjct: 114 SLDEMKNGQKPSENFQALNLIGKAVAGDSSKVVRGTNDREHDFK------FTLPMAASEV 167 Query: 136 TATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA-SNGGTQLVA 194 + + D G VVRT ++ L AG + TW+G A G Y A + G ++ Sbjct: 168 SVKVRDAEGNVVRTYNLKSLKAGENKLTWNGEDEKAMKALPGEYQFIAEAKTADGKKMGI 227 Query: 195 QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + ++ GV N G L +G +V++I Sbjct: 228 KTDFDGMITGVSYSNEGPVLHVGN-QAIRFSDVKKI 262 >UniRef50_Q39R05 Flagellar hook capping protein n=2 Tax=Geobacter RepID=Q39R05_GEOMG Length = 218 Score = 144 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 9/207 (4%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 + + FL L V QL++QDP NP +++E QLAQ++ V N+ L I Sbjct: 17 KKSTGMNKDDFLKLFVTQLQHQDPLNPADSSEFIGQLAQLTQVEQAYNTNSNLTKIIDLF 76 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 + + SL + + IG V G + GS+ G L A +V I+D +G Sbjct: 77 NGATSLSSVSYIGKSVTANGDQINLTAGSKP-------ALGYRLPADAQQVAINISDISG 129 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQ 203 VVRT+++G AG + WDG +GST P G Y+ +++ N G + PL V+ Sbjct: 130 TVVRTLNLGNTRAGDGTILWDGRNGNGSTLPAGQYSFSVTGYNAKGEKFQGNPLLVGTVE 189 Query: 204 GVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G+ + + + L V + Sbjct: 190 GITLEGKEPNVTI-GGISVPLSNVLSV 215 >UniRef50_B8J086 Flagellar hook capping protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J086_DESDA Length = 284 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 3/228 (1%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T N + +++ + + SF+ LLV Q K QDP NPME+ E +Q+AQ Sbjct: 2 SSITQSLNRTNNEFNTALSKQKGSNLDKDSFMLLLVTQFKYQDPLNPMEDKEFIAQMAQF 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S++ + LNT++ ++ +N Q + A++ IG V + G T+ E +T T F Sbjct: 62 SSLEQLMNLNTSMEGLTNATNNQQMINATSYIGKQVTVSGNTI-GKVTDETTKESTITRF 120 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSYNVAI 183 T T+ D + VV ++ G + F W+G TDG+ A +G Y V + Sbjct: 121 RYAPADNTVGGTITVRDADNNVVYVEEVSPKNKGTTYEFLWNGKATDGTVAGDGVYTVNL 180 Query: 184 SASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + G +++ + A V GV+ L L L VRQ+ Sbjct: 181 VLRDSNGDAVLSDQVVDAKVTGVVNDGGVVYLGLEGGQLMPLANVRQV 228 >UniRef50_B4EYN7 Basal-body rod modification protein n=3 Tax=Proteus RepID=B4EYN7_PROMH Length = 264 Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 93/264 (35%), Positives = 137/264 (51%), Gaps = 33/264 (12%) Query: 1 MSIAVTTTDPTNTGVSTTSSSS--LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 M I+ + +PT+ + + SS + D++ +FLTLL+ Q++NQDPTNPM+NNELT Sbjct: 1 MGISASMNEPTDNTIIGEAPSSYHTKKGGSDDIKGNFLTLLITQMQNQDPTNPMQNNELT 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGT------- 111 SQLAQISTV GIE LN T+ +I GQID SQ+L+A++L+ H VMI G + Sbjct: 61 SQLAQISTVEGIETLNKTVNTIVGQIDQSQALRATSLVNHMVMIAGNEISVDKINNGENA 120 Query: 112 -----------------------GSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 + + ++ FG E D +T ITD +GA VR Sbjct: 121 GSDTDIDTDTTPDTQLDKLPASTDATDNENIFSSAFGFESFSPIDTLTVNITDSSGAKVR 180 Query: 149 TIDIGELT-AGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIR 207 TI++ V+ F WD T DG+ P G Y ++A+ Q+ + L+ A+V V Sbjct: 181 TIEMNSKILPDVYHFFWDCTDDDGNKVPTGKYQFTVNATFNDAQVPVKTLKSAVVNSVSM 240 Query: 208 GNSGNTLDLGTYGTTTLDEVRQII 231 LD+G +LDE+R++ Sbjct: 241 KEGKPHLDVGLGVIVSLDEIRKVF 264 >UniRef50_Q5R0P5 Flagellar hook capping protein n=2 Tax=Idiomarina RepID=Q5R0P5_IDILO Length = 227 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 8/210 (3%) Query: 22 SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 + + Q F LL QL QDP+ P+EN+++ +Q+ + GI L+ + Sbjct: 24 ADPDERSKLEQEDFFRLLTEQLSMQDPSKPVENDQMIAQMTNFTMAEGITGLSERFDQFA 83 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 + ++Q+LQAS ++G V++P TG+ + + Q+A V I D Sbjct: 84 SDMTSNQALQASTMVGRKVLVPTDQANLETGAGVTGM-------IATPQSAQNVKINIKD 136 Query: 142 KNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFAL 201 GA V+TI+IG++ G F WDG + +G AP G+Y+ +++A GG A Sbjct: 137 STGATVKTIEIGDMPQGTKEFEWDGKMANGDEAPAGNYSFSVNAQVGGKTEELPIQMHAR 196 Query: 202 VQGVIRGNS-GNTLDLGTYGTTTLDEVRQI 230 VQ V G G L+L G L +V +I Sbjct: 197 VQSVSTGGDRGVVLNLKGLGGIKLSDVTEI 226 >UniRef50_A4BQE9 Flagellar basal body rod modification protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQE9_9GAMM Length = 221 Score = 143 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 8/215 (3%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 ++ + + Q FL ++VAQL+NQ+P PM N E +Q+AQ ++ SGIE+L ++ Sbjct: 13 GGTAQAPKPATNEVSQDDFLKMMVAQLQNQNPLKPMSNGEFLTQIAQFTSASGIEQLQSS 72 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 + + ++ +LQA++L+G V++ G T V L A +T Sbjct: 73 FQAFQTNMQSNLALQAASLVGRQVVVQSEQGYLPAG-------GTMDATVHLPSAVRNLT 125 Query: 137 ATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQP 196 + D+ G VRT+++G G + +WDG TDG P G Y + + G + Q Sbjct: 126 VAVLDEAGQRVRTLELGPQPTGDAALSWDGHDTDGKRMPAGRYRLQAQSELDGQTVALQT 185 Query: 197 LQFALVQGVIRG-NSGNTLDLGTYGTTTLDEVRQI 230 A V V G + L+L G +LD + ++ Sbjct: 186 RTAATVDSVTLGTDQNLELNLTGLGAVSLDAITEV 220 >UniRef50_Q30UM0 Flagellar hook capping protein n=2 Tax=Campylobacterales RepID=Q30UM0_SULDN Length = 221 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 8/229 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+T+T + +++++ A + F+ LL+ +L++QDPT PM++ ++ SQ + Sbjct: 1 MAITSTGLNAATHAESAAANAAKDKTALGKDDFMKLLLVELQHQDPTEPMDSEKILSQTS 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q++T+ E N L ++ + SQ + IG + + G+ Sbjct: 61 QLATLEASENTNKALSELAASMSASQQFSTVSAIGKTADLGSNAITLDKGTNT------- 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 F + A T I D NG ++T+D+G GV+ FTWDGT +G +G Y Sbjct: 114 KFEMYFPDAISNGTVQILDVNGNTIKTLDVGTNPKGVYGFTWDGTNANGGAVDSGIYYAT 173 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 S +N + + ++ V L LG+ L V+++ Sbjct: 174 ASYTNPDGAALKTRVGAYPIESVRFDKGETFLKLGSN-YVPLANVKEVY 221 >UniRef50_B7VKM1 Flagellar hook capping protein FlgD n=54 Tax=Vibrionales RepID=B7VKM1_VIBSL Length = 236 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 10/231 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ D + T Q FL+LL QL QDP P+ N+++ +Q+A Sbjct: 10 SGLSYVDQLKSLQDGAKKPDETTGKQDLKQDDFLSLLTKQLAQQDPFKPVSNDQMIAQMA 69 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 +TV GI K+NT S++ + ++Q+LQAS+L+G V++PG + Sbjct: 70 SFATVDGIGKMNTQFESLNSSMTSNQALQASSLVGRDVLVPGAAGVKQGD-------GGM 122 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V+L QA D V + ++ G +VRT DIG +G WDG DG+ P G YNV Sbjct: 123 ASMVKLPQAMDNVMVRVENEVGQLVRTFDIGSKPSGDTRVEWDGKDEDGNPLPAGKYNVK 182 Query: 183 ISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGT-TTLDEVRQI 230 S G Q +A V V+ G+ L+L + + L EV ++ Sbjct: 183 ASGLLEGENTEFQVSSYANVNSVLLGKGDGNVLLNLAGFTSPVRLAEVLEV 233 >UniRef50_Q1YV96 Flagellar basal body rod modification protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YV96_9GAMM Length = 228 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 10/233 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M VT T + +++ Q +FLTL AQL+NQ+P +PM+N SQ Sbjct: 1 MVSTVTDTTFLTSDQYLEKENAVAYGEDELGQDAFLTLFTAQLQNQNPLDPMDNEAFVSQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA+ S++ GI+ + +L ++ + Q + +NL+G V + G G G Sbjct: 61 LAEFSSLEGIKGMQGSLDNMVNGMRQDQMVAGANLVGKKVQVAGGNFTGGNGEITKG--- 117 Query: 121 TTPFGVELQQAADKVTATITDK-NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 ++L A V ++ D +G ++ G G W+G G P GSY Sbjct: 118 ----SIDLDYGAQSVILSVYDPASGDLIYRDTQGARLPGRAEMNWNGRDRQGEIVPEGSY 173 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNS--GNTLDLGTYGTTTLDEVRQI 230 ++ SA G A V+ V S TL++G L ++ +I Sbjct: 174 LMSASAVINGKLETVPVTTMADVRSVSWDPSAQEITLEVGDNVFVALADIERI 226 >UniRef50_A7HN98 Flagellar hook capping protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN98_FERNB Length = 218 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 10/222 (4%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 N+ + S+S+ + + +FL LL+ QLK+QDP PM++ + +Q++Q+S++ Sbjct: 4 NVNSMSNLFSTSTDRTTKKDLDKEAFLKLLITQLKSQDPLEPMKDRDFIAQMSQLSSLEQ 63 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 + ++ ++ S QA ++IG ++ + G E V Sbjct: 64 VMNMSKSVQSFVDTAAQLYRTQAVSMIGKTAVVKTNVINVENGVPE--------SKVFNL 115 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI-SASNG 188 + + I D NG +++ IG++ AG+ F WDG +G+ +G Y I + Sbjct: 116 DSPANIVIKIFDSNGKLIKEEKIGQVEAGMQLFAWDGKDENGTKVKDGRYTFKILKTTPD 175 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G ++ +V GV + + + + E+ +I Sbjct: 176 GGYEEIPSVESGIVSGVQFDGNKINVIVSN-KIYDISEISEI 216 >UniRef50_C6WVA8 Flagellar hook capping protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVA8_METML Length = 224 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 89/232 (38%), Positives = 123/232 (53%), Gaps = 13/232 (5%) Query: 5 VTTTDPTNTGVST-----TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 +TT + TNT T + T ++ Q F+ LLV Q++NQDP NPM+N ++TS Sbjct: 1 MTTVNTTNTASQTLLDAVNGKKNTTTTSVDAAQDRFMKLLVTQMRNQDPLNPMDNAQVTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQ+STV+GI+KLN TL ++ + QS QASN+IG + G+ Sbjct: 61 QMAQLSTVTGIDKLNNTLETLINNVQMGQSYQASNMIGRNI--------LTPGNTVETAG 112 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 FGVEL ADKV +I D GAV+RTID+G+ G TWDG DG+ A GSY Sbjct: 113 EGGYFGVELPIGADKVKVSIKDSAGAVIRTIDLGKQDTGTLPLTWDGLKDDGTAAATGSY 172 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +SA+ G A L FA V + ++G L+L T V++I Sbjct: 173 KFEVSATIGTNTAEANALSFAKVLSISNYSTGVKLNLSNLMTVDTSAVKEIF 224 >UniRef50_C5V018 Flagellar hook capping protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V018_9PROT Length = 188 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 118/196 (60%), Gaps = 8/196 (4%) Query: 36 LTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNL 95 + LLV QLKNQDP NPM+N ++TSQ+AQISTVSGI+KLN TL ++S + +Q+LQA+ + Sbjct: 1 MKLLVTQLKNQDPLNPMDNAQMTSQMAQISTVSGIDKLNATLQALSASMTPNQTLQAATM 60 Query: 96 IGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGEL 155 IG GV++ G + G G EL AA+ ++TD +G ++ TID+G Sbjct: 61 IGRGVLVTGNGMDLKAGVG--------LGGFELASAAESNKVSVTDASGVLISTIDLGAQ 112 Query: 156 TAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLD 215 AG+ F WDG + G+ P+G Y A++++ + A L++ +V V +G+ G L Sbjct: 113 PAGIVKFQWDGKDSAGNVMPDGQYTFAVTSTQASNTVAATGLEYGIVGSVTQGSQGVELS 172 Query: 216 LGTYGTTTLDEVRQII 231 +G L +V+QI+ Sbjct: 173 VGQMQKVALAQVKQIL 188 >UniRef50_C6P5G1 Flagellar hook capping protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5G1_9PROT Length = 220 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 9/228 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT ++T + ++++ T S Q FLTLLV QLKNQDP NPM+N ++TSQ+AQ+ Sbjct: 1 MTTPVQSSTSAAAAAATAATSSQLGATQDRFLTLLVTQLKNQDPLNPMDNAQVTSQMAQL 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 STVSGI +LN+T+ ++S + SQSLQA+++IGH ++PG + G + A Sbjct: 61 STVSGINQLNSTVQALSASMATSQSLQATSMIGHAALVPGAQIDLLKGQSDAA------- 113 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELT-AGVHSFTWDGTLTDGSTAPNGSYNVAI 183 VEL Q AD VT TITD G VVRT+ +G+ + AGV +F WDG G+T +GSY + Sbjct: 114 -VELAQPADNVTVTITDAKGNVVRTLPLGQQSAAGVVNFQWDGKDNTGATVADGSYKFSA 172 Query: 184 SASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +A GGT L + LV V + G TL +GT G L VRQ++ Sbjct: 173 NAVLGGTNSSPTTLSYGLVNNVSLTSGGVTLGMGTLGNVGLSAVRQVL 220 >UniRef50_Q46PG2 Flagellar hook capping protein n=4 Tax=Cupriavidus RepID=Q46PG2_RALEJ Length = 226 Score = 141 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 ++ ++AADLQS+FL +LV Q+ NQDP NPM+N +LTSQLAQISTVS ++ +N+TL Sbjct: 20 NAALQSGSASAADLQSNFLKMLVTQMNNQDPLNPMDNAQLTSQLAQISTVSSMQTMNSTL 79 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 + Q S+++ ++ LIG VM+PG+ G FGV+L AD VT Sbjct: 80 TQLLNQTSASRAMDSAALIGRTVMVPGSQFSVKDGVA-------GQFGVDLPSTADAVTV 132 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 + D +G VVRTID+ TAGVH WDG G +G Y+ +SA+ GT + L Sbjct: 133 NVLDAHGNVVRTIDMKGQTAGVHDIAWDGKNDAGVAVADGDYSFKVSATANGTSVQPVAL 192 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + V + +SG +D+G +D+VR+I+ Sbjct: 193 VYGKVNSISGDSSGVLVDVGNGQQANVDDVRRIL 226 >UniRef50_C5SD64 Flagellar hook capping protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD64_CHRVI Length = 236 Score = 141 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 129/232 (55%), Gaps = 10/232 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGS-NAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 S+ +T + TN+ T + ++ TGS N A QS FL L++ QL NQDPTNP+EN + SQ Sbjct: 11 SLGLTGYNTTNSTTGTAAGTASTGSGNNALGQSDFLKLMITQLTNQDPTNPVENEDFASQ 70 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ ST++GIE+L ++ ++S + Q+++A+ L+G V++P + G Sbjct: 71 MAQFSTLTGIEELTSSFETLSKTLLQGQTVEAATLVGQSVLVPASKADVSAGQ------- 123 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 V+L +A +V+ I D G +V+T+D+G +AG+ F WDG L +GS AP G+Y+ Sbjct: 124 KVSGAVDLTASATQVSVNIQDATGQLVQTLDLGNQSAGLIDFEWDGLLANGSAAPAGTYS 183 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 +++A G + L V+ V + LD+ G+ ++++ Sbjct: 184 FSVTAQRNGQTEALETLLDGQVKSVSLDSGTGALMLDVQGLGSVGFSSLKRV 235 >UniRef50_C8WYV7 Flagellar hook capping protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WYV7_DESRD Length = 227 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 10/226 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 A+ + + + S S + + + FL LLV QL+NQDP NP + E+T+QLA Sbjct: 2 AAIPSVNSSLAAQSVQSPERTGSQDDSLGKMDFLNLLVTQLENQDPMNPSDPTEMTAQLA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S++ + ++ ++ + + A +++G V + G T Sbjct: 62 QFSSLEQLTNISESMEGLDAMKTAYEQNAALSMLGRNVQLEGNTFTF--------QNEPV 113 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 G L++AA+ V I D +G V TI + T G H+ WDGT DG + P G Y Sbjct: 114 QLGYNLERAAESVEIQIMDASGKTVDTIKGLQGTVGEHTVQWDGTDADGKSVPAGEYQFV 173 Query: 183 ISASNGGTQL-VAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + A + G + P A VQGV G+ G L L + G+ L ++ Sbjct: 174 VGAQDAGGNVLQPTPQVMAKVQGVDYGSGGQKL-LTSAGSIALADI 218 >UniRef50_A6FKY3 Possible FlgD protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FKY3_9RHOB Length = 233 Score = 140 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 81/221 (36%), Gaps = 13/221 (5%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 + + T++ + + +FL +L AQ++NQDP NP+E+ + QLA STV Sbjct: 18 SSIPSASANTTAEAPPKPALSSDFETFLKMLTAQMRNQDPLNPVESADFAVQLATFSTVE 77 Query: 69 GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 + N L ++ ++ Q S +G L G V Sbjct: 78 QQVRTNDLLETLGDRMGAMGMSQLSGWVGMEARAIAPVQLDG---------APVTLTVPP 128 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 AD D G +V+ D+ + W G +G+ P+G Y++A+ + + Sbjct: 129 VPLADAAQIVARDSTGTIVQRSDVSIEGG---TLQWAGVGPNGAPLPSGRYDLAVESFSN 185 Query: 189 GTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 G L P+ + TL L + + Sbjct: 186 GESLGETPVQVHGRIVEARNDAGAITLVLAGGQDVPAESIL 226 >UniRef50_A6FHZ1 Flagellar basal body rod modification protein n=1 Tax=Moritella sp. PE36 RepID=A6FHZ1_9GAMM Length = 237 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 9/225 (4%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 + T + + S Q F +LL +L QDP P+EN+E+ +Q+A +T Sbjct: 14 SSQFKTEKRDAAEQAAESSRKELGQEDFFSLLTQELAFQDPFKPVENSEMVAQMASFTTA 73 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 GI + + ++ + ++Q+LQAS+L+G V+ P +T G +E Sbjct: 74 DGIANMGSKFEQLTTIMSSNQALQASSLVGTKVLAPASTAFLSAGESVSG-------RIE 126 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 L Q A + I ++ G V+ I++GE G +F WDGT +G+ GSY + SAS Sbjct: 127 LPQNAPNLRLQIANQVGEVINVINLGEQKGGPVAFEWDGTDMNGNKVAEGSYRLKASASI 186 Query: 188 GGTQLVAQPLQFALVQGVIRGN--SGNTLDLGTYGTTTLDEVRQI 230 G + F V+ V GN G L+L G+ L + +I Sbjct: 187 DGNAQDLKVSSFQHVESVNIGNTGGGIILNLKGMGSLPLSQATEI 231 >UniRef50_Q1N303 Flagellar hook capping protein n=1 Tax=Bermanella marisrubri RepID=Q1N303_9GAMM Length = 262 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 106/267 (39%), Gaps = 42/267 (15%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ + + + ++ FL LLV Q+ NQ+P P EN+E +Q Sbjct: 1 MTEVTNSGTSSQVLDQYKQKDDDKPKDNELGRNEFLKLLVTQMNNQNPLKPQENSEFVAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S+V G+E LNTT+ S+S + +SQ+LQAS+L+G V++P + A Sbjct: 61 LAQFSSVEGLENLNTTVDSMSDGLRSSQALQASSLVGQSVIVPNQEYGFLQNGDVVAGVA 120 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG-------------- 166 E+ + I +K G + TID+G G S WDG Sbjct: 121 ------EVPATTMNLNLQIKNKAGQTLETIDLGFHEKGPASLRWDGANLELDGEIVDLDR 174 Query: 167 ---------TLTDGSTA------------PNGSYNVAISASNGGTQLVAQPLQFALVQGV 205 DG+ P G Y +SAS G V V Sbjct: 175 SKLNRQEYFKDEDGNLVLDDNGKPIPMPYPPGEYKFELSASIDGKTEGLDTAMSGRVDSV 234 Query: 206 IRG-NSGNTLDLGTYGTTTLDEVRQII 231 G N+ TL+L + EV+QI+ Sbjct: 235 SIGANNAVTLNLAGGIKAAISEVKQIL 261 >UniRef50_A9BEX8 Flagellar hook capping protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEX8_PETMO Length = 220 Score = 136 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 9/225 (4%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 + + ST + + +FL LLV +L+NQDPT PMEN +L +QL+Q+S Sbjct: 3 NSVSMDSIYQSTYDAKKDREIKKELDKEAFLELLVTELQNQDPTQPMENKDLVAQLSQLS 62 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 + I ++ + + + LQA++LIG V++ T+ +G EG Sbjct: 63 STEQITNMSQAIQEMVNSQMSLNKLQAASLIGKTVVVNDNTIDLQSGVAEGLNYG----- 117 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 +V I D G VV T D+G AG+HS+ W G DG+ P+G Y I Sbjct: 118 ---LDNGSQVYLEIYDSKGQVVYTEDLGVQEAGLHSYVWSGRNNDGTMMPDGEYLYGIYT 174 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G + ++ V+ V ++ L + V +I Sbjct: 175 VENGQMVANTGVKSGTVEAVKFLDNELYLLI-NGEMYPYSVVNEI 218 >UniRef50_A1B2H8 Flagellar hook capping protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B2H8_PARDP Length = 221 Score = 136 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 85/229 (37%), Gaps = 13/229 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M + ++ + S S+ + S +AD FL +L Q+KNQDP NPM + + Q Sbjct: 1 MDMNTSSVTGNVYEGGSQSFSAPSESGSADQFEMFLKMLTTQIKNQDPLNPMNSTDFAVQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA S V + N L + I+ + Q SN IG V T Sbjct: 61 LATFSGVEQQVQTNLLLTQLLQNINGGELGQFSNWIGREVRTTSPVWF---------DQT 111 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +E A+ D G V G ++ +W G G+ G Y+ Sbjct: 112 PLTLEIEGTADAETAFLVTLDDQGNEVLRQSTGAISG---EVSWHGEDPSGNMLATGFYS 168 Query: 181 VAISASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + G L + + ++ + GV +G L L G+ +D V Sbjct: 169 FRLEEMKDGRSLAPRDVAAYSRITGVELSRNGPELILLGGGSVRVDTVT 217 >UniRef50_Q3IDW5 Flagellar biosynthesis; initiation of hook assembly n=2 Tax=Alteromonadales RepID=Q3IDW5_PSEHT Length = 225 Score = 136 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 8/231 (3%) Query: 1 MSIAVTTTDP-TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 MS ++T+ ++ ++ + A Q F +LL QL QDP+ P +N+++ + Sbjct: 1 MSNDISTSSSYLDSLRWQEKQAASKDKSDALTQEDFFSLLTQQLSFQDPSKPADNDQMIA 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+ + GI LN+ +++ + ++ +LQAS L+G + + + + Sbjct: 61 QMTSFTMAEGISNLNSNFEALAASMTSNSALQASTLVGKQAL-------LESDTLDLNEA 113 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 V ++ + + I D++G +VRTID+G AG F WDG G P G Y Sbjct: 114 GDARGSVVAEKPVESLKLRIEDESGQLVRTIDLGSQPAGAVRFAWDGKNEAGERLPPGEY 173 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + S G F ++ V + + G L +V +I Sbjct: 174 KIKAEGSTNGEFSSLPIATFKNIESVNINGANGIIINTKEGAVRLTDVAEI 224 >UniRef50_Q47I24 Flagellar hook capping protein n=2 Tax=Betaproteobacteria RepID=Q47I24_DECAR Length = 229 Score = 136 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 94/237 (39%), Positives = 139/237 (58%), Gaps = 18/237 (7%) Query: 5 VTTTDPTNTGVSTTSS---------SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENN 55 +TT + TN+ S ++ SS +GS AADLQ SFLT+L QLKNQDP NPM+N Sbjct: 1 MTTVNSTNSSASIINALNGGSSSSASSTSGSTAADLQDSFLTMLTTQLKNQDPLNPMDNA 60 Query: 56 ELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 ++TSQLAQIST+ GI+ LNTTL S+ + SQ+LQA+ IG V++ G+ + +G + Sbjct: 61 QMTSQLAQISTLEGIQGLNTTLTSLLSSYNTSQALQAAGAIGSQVLVEGSGLALSSGISQ 120 Query: 116 GAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAP 175 G V L AA+ V TI D +G VV+T ++G+ +AG +F WDG G+ Sbjct: 121 GG--------VTLGSAANSVVVTIKDGSGKVVQTQELGKQSAGTVAFNWDGKDASGNQLS 172 Query: 176 NGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +G Y +++A++ GT + A P+Q V V++ S L+L + T + V Q + Sbjct: 173 DGKYTFSVAATSAAGTAVTATPIQVGTVSAVVKSGSSFVLELSSGETVAFNNVLQFM 229 >UniRef50_Q3A5C3 Flagellar hook initiation protein FlgD n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5C3_PELCD Length = 218 Score = 135 bits (340), Expect = 9e-31, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 9/224 (4%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 TT +++S + ++ + FL LLV QL+NQDP NP + E TSQLAQ S+ Sbjct: 2 TTVTDVNQTASSSMTGSLTGSSNLGKDDFLLLLVTQLQNQDPLNPQDPTEFTSQLAQYSS 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + + +N L + N + A L+G V++ + G Sbjct: 62 LEQLFTVNDQLQQLETTNGNVVQMTALGLMGQDVVVQSDSFKLGGTPVTLG--------Y 113 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +L D+V + + G V T++ +L+AG H W+GT +G++ P G Y + ISA Sbjct: 114 DLSNNVDEVQLVVQNAKGQTVATLEGTDLSAGEHFIQWNGTDANGASLPAGDYQLQISAR 173 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G PL V GV +TL + + G L +V + Sbjct: 174 RDGETASGSPLVKTAVSGVDLNGGSSTL-VTSLGEYNLSKVTSV 216 >UniRef50_A4SL11 Flagellar hook capping protein FlgD n=3 Tax=Aeromonas RepID=A4SL11_AERS4 Length = 242 Score = 135 bits (340), Expect = 9e-31, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 8/231 (3%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A T++ + +T ++ + T Q+SFL LL QL QDP P++N ++ SQ+ Sbjct: 1 MADTSSVNGISRTTTQTTDTTTAPKKELDQASFLKLLTMQLSYQDPFKPVDNAQMLSQMT 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 +ST GI L+T +G+++ + +SQ+LQAS L+G V++ E + Sbjct: 61 SMSTSEGINSLSTQMGNLNTLMTSSQALQASALVGQNVLLQSNVGFL-----ENEGSIGG 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V ++ V T+ D+ G V++ + G FTWDG +G +G Y + Sbjct: 116 VVAVGVENKYTSVKITVEDEKGQVIKEFALEGDQKGNVEFTWDGKDKNGEPVASGKYVLK 175 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 + +N G + V V+ GN L+L GTTTL+ + QI Sbjct: 176 ANGNNSEGKSESIATFAYGKVDSVVLGNGTNPTQLNLKGLGTTTLNSILQI 226 >UniRef50_Q1ZFB9 Flagellar basal body rod modification protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZFB9_9GAMM Length = 232 Score = 135 bits (340), Expect = 9e-31, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 9/219 (4%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 S++ Q F LL QL QDP P++N+E+ +Q+A +T GI K+ Sbjct: 17 TPEQVSANKDVDKKQQLEQEDFFALLSQQLAYQDPFKPVDNSEMIAQMASFTTAEGITKM 76 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 + G + +SQ+L+AS+L+G V+IP T + + + A Sbjct: 77 GNEFAGLKGVLSSSQALEASSLVGKKVLIPSDTGYSMEDKG-------LSGSLSTKTGAY 129 Query: 134 KVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV 193 V + DKNGAVV+T+ +G++ G F WDG + G G Y G Sbjct: 130 SVMVDVQDKNGAVVKTLTLGDIDTGNQRFNWDGLDSQGKRVAPGKYTFNAHGMVNGKGER 189 Query: 194 AQPLQFALVQGVIRGNS--GNTLDLGTYGTTTLDEVRQI 230 + +A V+ V G G +L+L L + ++ Sbjct: 190 LESNVYAHVESVSLGGGQAGVSLNLKGLSGIKLVDAIEV 228 >UniRef50_D1NZK4 Basal-body rod modification protein FlgD n=3 Tax=Providencia RepID=D1NZK4_9ENTR Length = 285 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 51/282 (18%) Query: 1 MSIAVTTTDP---TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNEL 57 M I+ + D + G + +S+ S + D++ +FLT++V Q++NQDPT PM+N +L Sbjct: 1 MGISASMNDSLDNSVAGPAAVASNVPKKSQSDDMRDTFLTMIVTQMQNQDPTKPMDNADL 60 Query: 58 TSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLA-------- 109 T QLAQI+T+ + KL+ ++ IS QI + QSLQA+ L+G GV+IP ++ Sbjct: 61 TGQLAQIATLESMNKLSDSVSGISQQIGSGQSLQATQLVGKGVLIPRNEIILASLKKESN 120 Query: 110 -------------------------------------GTGSEEGAVTTTTPFGVELQQAA 132 E ++PFG L + A Sbjct: 121 GENSTVTKPANPLPDEVISANSPSNFGLSNLGANEGDEGSEEPQTDYISSPFGFFLPKLA 180 Query: 133 DKVTATITDKNGAVVRTIDI-GELTAGVHSFTWDGTLTDGSTAPN--GSYNVAISASNGG 189 D V TI DKN V+RTI E+ ++ WDG +G+ + G Y + A G Sbjct: 181 DTVEITIRDKNRTVIRTISYDSEVKPDIYDMAWDGRDNNGNLVADPKGKYFFDVKAVRMG 240 Query: 190 TQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 +++ L + V GV G+ LD+G + L + ++ Sbjct: 241 SEIEVTKLGYTRVNGVTPGSDAPLLDVGIGQSVPLSSIFKVY 282 >UniRef50_Q2LSZ6 Flagellar hook capping protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSZ6_SYNAS Length = 220 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 TN G + ++ S T +N + FL +L+AQL+NQ+P NP++ + +QLAQ S++ + Sbjct: 5 TNIGKAASAGSEGTSTNKLTGKDEFLKMLIAQLQNQNPLNPLDGTDFAAQLAQFSSLEQL 64 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 +N+TL S+S + A+NLIG V G+ ++ L + Sbjct: 65 TNMNSTLESLSALQTTQNGIMAANLIGRQVSANQ-----EGGNILTVTGSSANLSYSLAK 119 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWD-GTLTDGSTAPNGSYNVAISASN-G 188 A KVT I ++ G +V+T++ +AG ++ TWD G G+Y +SA + Sbjct: 120 DAKKVTVNIYNEEGKLVKTLEGRNQSAGHNTLTWDCGVDAQ------GAYTFDVSAEDSS 173 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G + +V V + + + ++ ++ ++ Sbjct: 174 GNDVSVNTTITGIVTEVRFTDQSLLVTV-NGRQISIADIVEV 214 >UniRef50_Q6AJT4 Related to basal-body rod modification protein (FlgD) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJT4_DESPS Length = 248 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 11/210 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSL--TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 MSI + T +TT+ + +G N+ + FLTLLVAQL+NQDP NP E E T Sbjct: 1 MSIDFAAINKAATTGTTTTKNGSLVSGKNSTMGKQEFLTLLVAQLQNQDPLNPDEGTEFT 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 +QLAQ S++ + +N +G++ NS ++ N IG V+ G + E Sbjct: 61 AQLAQFSSLEQLMSINKGMGNMITSTSNSDNIALLNTIGKEVLYYGDEIDFQGDPVEFG- 119 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 L + A V + NG V +ID EL+ G H+FTWDG DG+ A +G+ Sbjct: 120 -------YMLAENATSVKIELR-LNGETVHSIDSTELSKGDHTFTWDGMTEDGNPAAHGA 171 Query: 179 YNVAISASNGGTQLVAQPLQFALVQGVIRG 208 Y + ++A ++A P+ + V GV Sbjct: 172 YKIVVAAQGAKNAIIAPPIIKSKVTGVNLD 201 >UniRef50_Q2RZC4 Basal-body rod modification protein FlgD n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZC4_SALRD Length = 260 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 14/234 (5%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + + D + G S + ++A ++ FL LL QL+NQDP+NPM+ + +QL Sbjct: 33 TAVLPNGDGSQDGESGGKGALSQATSANLGKNDFLKLLTTQLQNQDPSNPMKGKDFAAQL 92 Query: 62 AQISTVSGIEKLNTTLGSISGQ----IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGA 117 AQ S+V + ++ + + A++LIG V G T+ Sbjct: 93 AQFSSVEQLTNISGQIEEQGKSDGALAQSINDSMATDLIGRTVKTSGNTLQ-------WT 145 Query: 118 VTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177 FGV+L++ A + T TI D G VRT + ++ TWDGT G+ P+G Sbjct: 146 GEGEATFGVDLERPASEATVTIRDAGGNAVRTKTLENVSQ-STEVTWDGTADGGAQVPDG 204 Query: 178 SYNVAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +Y+V +SA+ G G + V V + +L + ++ V+ I Sbjct: 205 TYSVEVSATGGSGDAVEGTARLEGTVDRVTLEDGRTSLRI-GGAQVSMGRVQSI 257 >UniRef50_B9NLP1 Basal-body rod modification protein FlgD n=2 Tax=Rhodobacteraceae RepID=B9NLP1_9RHOB Length = 221 Score = 135 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 88/229 (38%), Gaps = 13/229 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + T T ++ + + +FL +L Q +NQDP P++++E SQLA Sbjct: 1 MITATNPSTLGAAQANAAGNTQRAALTSDFETFLRMLTVQARNQDPLEPLDSSEYASQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S V + N L +S + + Q ++ +G V Sbjct: 61 QFSMVEQQVQANALLSDLSLTLGSVNLNQLASWVGMDVRTDAPFRFDDQPVA-------- 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + +AD+ + D G VV D + F W G G+ P G+Y+ A Sbjct: 113 -IFASAEPSADRAELVVRDSQGRVV---DRRAVPVDQAEFEWAGVDGAGNALPAGTYSAA 168 Query: 183 ISASNGGTQLVAQP-LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +++ + G L P F+ V G+ L L + ++D + QI Sbjct: 169 LASFDNGELLAETPAAVFSRVVEAQVGDGAVMLTLNSGAEVSVDTITQI 217 >UniRef50_B6IQD6 Basal-body rod modification protein FlgD, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQD6_RHOCS Length = 219 Score = 135 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 10/226 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT P + S +++ + A SFL LL AQL NQDP P++ + +QLAQ Sbjct: 1 MTTVAPPSAAGSQQTTADVASVRLAQDTQSFLKLLTAQLANQDPMAPIDATQFVTQLAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V + NT L + G++ +S +G V I + G Sbjct: 61 SSVEQAVQSNTRLAEVLGELRSSSERLDLAYVGRTVEIESDALPLIGGGA--------KA 112 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 + + +K I D+ G +VRT++ G G H TWDG G +G Y + ++ Sbjct: 113 SYTVPEDTEKTEIRILDQKGTIVRTLE-GSSIPGSHLLTWDGLDDSGVKLADGIYQIDVA 171 Query: 185 ASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 N G +L + V+ V R + + + D++ Sbjct: 172 PRNPAGDRLGSTVQTADTVERVRRVDGETVFVMRSGLQVQRDQIVS 217 >UniRef50_Q485P4 Basal-body rod modification protein FlgD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485P4_COLP3 Length = 256 Score = 135 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 9/210 (4%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 GS QS F LL +L NQDPT P++NN++ SQ+ ST G+ LN + GS +G Sbjct: 49 SDGSEGMLTQSDFFALLTKELANQDPTKPVDNNQMISQMTAFSTTDGVRTLNDSFGSFAG 108 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 + +SQ+LQAS+L+G V++ G + + A V + + Sbjct: 109 SMTSSQALQASSLVGRSVLVEDNVFGMAEGEAVKG-------KLVSDKPASNVKIYVENV 161 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALV 202 G V++T+ +G++ AG +FTWDG G A G+Y I G + + V Sbjct: 162 AGEVIQTVPVGDVKAGGFTFTWDGQTAKGEPAEAGAYRFRIVGLVEGEAAELEAQTYRKV 221 Query: 203 QGVIR--GNSGNTLDLGTYGTTTLDEVRQI 230 V L+L L++V ++ Sbjct: 222 DSVTLAGSGGKIVLNLNGGSAMALEDVVEV 251 >UniRef50_A4BEL4 Flagellar hook capping protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEL4_9GAMM Length = 248 Score = 134 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 27/249 (10%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 V + + SN ++ FL L++A+L NQDP P ++ + ++LA Sbjct: 2 TDVNNVNSALGQYDIGNKKKEETSNDELGKTEFLELMIAKLNNQDPLKPQDDAQFIAELA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q STV GI+ ++ ++ +SQ+LQAS+L+G V I G S + Sbjct: 62 QFSTVEGIQNMSAGFEELATSYKSSQALQASSLVGGAVTID------GNTSSKLRHGELV 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG---------------- 166 E+ +D + I D G ++ + +G G +F WDG Sbjct: 116 YGSAEIPSGSDNLFLQIEDSTGQIIEDVPLGYQPNGELTFKWDGANLEVNGELADIDYSK 175 Query: 167 --TLTDGSTA--PNGSYNVAISASNGGTQLVAQPLQFALVQGVI-RGNSGNTLDLGTYGT 221 T +G+ P G Y I S G V V V GN+ L+L + T Sbjct: 176 FETDENGNIIPHPAGDYTFRIQGSVVGQAQVMDVSMSDRVDSVTILGNNDIQLNLASGET 235 Query: 222 TTLDEVRQI 230 T+ +V+QI Sbjct: 236 ATMADVKQI 244 >UniRef50_A3PFK9 Flagellar hook capping protein n=4 Tax=Rhodobacter sphaeroides RepID=A3PFK9_RHOS1 Length = 222 Score = 134 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 81/229 (35%), Gaps = 14/229 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M++ T T ++ + + +FL +L QL+NQDP NPME+++ Q Sbjct: 1 MNVTGTETSAGSSTTRS-RGDASADKAVTSDYETFLRMLTTQLQNQDPMNPMESDDFAMQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LA S V K N L + I + + IG + G Sbjct: 60 LATFSGVEQQVKTNEILTGMGASIGVMGLSELAGWIGREAEVEAPAWFDG---------A 110 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + + AD+ + + GAVV DI G W GT G P G+Y+ Sbjct: 111 PLTLSPKPSEDADRAVLVVRNAAGAVVAQEDI---PIGGGQMEWAGTDASGQPLPKGAYS 167 Query: 181 VAISASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + + G + +A + G+SG L + V Sbjct: 168 FTVESYTGDQVTDTSKVGVYAEIIEARGGSSGTLLVMKGGIEVPASAVT 216 >UniRef50_Q0FVE9 Possible FlgD protein n=2 Tax=Rhodobacteraceae RepID=Q0FVE9_9RHOB Length = 224 Score = 134 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 16/231 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNA---ADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 S AVT PT ST S+ NA + +FL +L Q++NQDP NP+++ + Sbjct: 3 SSAVTGAIPTGRAESTGSAGEEQTKNAAVLSSDFETFLKMLTTQMQNQDPLNPVDSTDYA 62 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 +QLA S+V N LG ++ + Q + IG V+ G Sbjct: 63 TQLATFSSVEQQVLTNDLLGDLAQAMTGGTLQQLGSWIGRDVLADAAVRFDGAPLV---- 118 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 E + AD + D G+VV+ + + W G G+ +G Sbjct: 119 -----MRPEFEPGADAARLVVRDAAGSVVQRLSLDPSQP---VVAWQGVRDSGTPMASGI 170 Query: 179 YNVAISASNGGTQLVAQP-LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 Y+ + + +GGT + QP + V V R L L V Sbjct: 171 YSFEVESLSGGTTVARQPAQVYNPVIEVRREGEATLLTLSDGSEIDAKAVT 221 >UniRef50_P57421 Basal-body rod modification protein flgD n=4 Tax=Buchnera aphidicola RepID=FLGD_BUCAI Length = 236 Score = 134 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 122/221 (55%), Gaps = 7/221 (3%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 N V ++ N DLQ +FL+LL+AQ+KNQDPT+P++N++LTSQLAQI+T SG+ Sbjct: 22 NNEAVKKNDNNLPNDINPPDLQKNFLSLLIAQIKNQDPTDPIKNSDLTSQLAQINTASGM 81 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 +KLN T+ S QI +Q++Q S LIG VM+P ++ T T FG+EL + Sbjct: 82 QKLNNTVDQFSNQISKNQNIQLSTLIGRHVMVPNKKII-------HTKDTKTQFGIELFE 134 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT 190 A V ITD N + + E AG H+F WDG + ++ +G YN+++ A Sbjct: 135 KATSVEIKITDDNNKTLYLKQLKETEAGRHNFFWDGQDLNKNSVMSGQYNISVIAKKNNQ 194 Query: 191 QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + L +V +I + +DLG G T +R+I+ Sbjct: 195 NIPVNSLSVGVVNSIIMSSGNAIIDLGESGQITPLSIREIL 235 >UniRef50_A8TLX1 Flagellar hook capping protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLX1_9PROT Length = 222 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 13/224 (5%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 D + ++ + SS + + FLTLL QLKNQDP +PM+N+E+ +QL Q S V Sbjct: 2 DSVSPISTSGTKSSTSADKLSKDFDMFLTLLTTQLKNQDPLDPMDNSEMVNQLVQFSNVE 61 Query: 69 GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 N L + +++ + + + IG V + T FG Sbjct: 62 QQIAQNKNLEQMILLLNSQSAASSVSYIGRDVQF-------TDSTTVYDGTKPVTFGYTP 114 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNG 188 + A+ V I D +G ++RT+D GE +A H+F WDG DG+ AP G Y + A + Sbjct: 115 TKTAESVKIDIADADGKIIRTVD-GERSASRHTFVWDGLDKDGAAAPAGQYTFLVKAKDA 173 Query: 189 -GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + V G +GN L +G +V +++ Sbjct: 174 SDKNITVDKDITGHVTGAASDATGNYLLIGDL----AVDVTKVV 213 >UniRef50_A7HV67 Flagellar hook capping protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HV67_PARL1 Length = 226 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 11/229 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + ++ + SS + A +FL LL QL++QDPTNPM +++ T QL Sbjct: 1 MDIASASAAVQAATSGAKSSTASAALAGNFDTFLKLLTTQLQHQDPTNPMSSDQFTQQLV 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V + N L ++ + Q+ +L+G V GT L GS + + Sbjct: 61 QMSGVEQSIQTNRYLETLITANAIQNASQSVSLLGKEVTGSGTGTLLADGSAKWS----- 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + A T + + +GA V T + TAG H FTWDG + GS P+G+Y + Sbjct: 116 ---FAVASDASDTTLQVINADGATVYTEKMDA-TAGTHQFTWDGKDSKGSDLPDGTYFLR 171 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++A+N G + +V G+ + L + ++ + Sbjct: 172 VTANNASGQPVAVDTRTTGIVTGIDLSTTDPLLTVNGAQ-IRYSQITSV 219 >UniRef50_A8FXW6 Flagellar hook capping protein n=21 Tax=Shewanella RepID=A8FXW6_SHESH Length = 282 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 9/232 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNA-ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 + TT +P + SS+ N+ Q F +LL QL QDP P++N+++ SQ Sbjct: 42 TADSTTGNPFIDSIRLPEESSIPEPNSQELTQEDFFSLLSQQLSMQDPFKPVDNDQMISQ 101 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +A STV GI+ LN + +++ + +SQ+LQAS L+G V+IP T A Sbjct: 102 MASFSTVDGIKNLNDEIVNLNSVMTSSQALQASGLVGQKVLIPSDTGYIS------AEDP 155 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + + +A D +T + D G +V++ I G +WDG +G +G+Y+ Sbjct: 156 SINGIISTPEAIDTITVRVEDDKGQLVKSFTIDGSAGGNIDVSWDGLGANGEPVASGNYS 215 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 + S G+ +A V V G ++G+ L+L G L +V + Sbjct: 216 IKASGRIDGSSEELPVSTYAHVTSVSLGTASTGSILNLRGVGGIKLGDVLAV 267 >UniRef50_B5JZB8 Basal-body rod modification protein FlgD n=2 Tax=Rhodobacteraceae RepID=B5JZB8_9RHOB Length = 226 Score = 133 bits (334), Expect = 4e-30, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 13/227 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + +T + + + + + + + +FL +L Q++NQDP NP +++E QLA Sbjct: 7 MELTQALTPVSQPAFSPQAEPSETVISSNFETFLKMLTVQMENQDPLNPTDSSEYAQQLA 66 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 S V N L ++ Q++ + Q ++ +G G + Sbjct: 67 TFSGVEQAVLTNDLLSALMVQMNTTGMAQMADWVGKEARAIVPGHFDG---------SPI 117 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 ADKV ++D G V+ DI W GT +DG+ P+G Y+ Sbjct: 118 TIAPNPAAIADKVELVVSDPQGNEVQRYDIPNSA---DPIEWAGTQSDGTPLPSGLYHFQ 174 Query: 183 ISASNGGTQL-VAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + +S G + +A VQ V N + L L + +V Sbjct: 175 VVSSANGVPVLAETAATYARVQEVRSENGQSVLVLNGGVSVLASDVS 221 >UniRef50_B2PY25 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PY25_PROST Length = 279 Score = 133 bits (333), Expect = 5e-30, Method: Composition-based stats. Identities = 80/276 (28%), Positives = 120/276 (43%), Gaps = 45/276 (16%) Query: 1 MSIAVTTTDPTNTGVSTTSS-----SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENN 55 M IA T D + + + S D++ +FL ++V Q++NQDPT PMEN Sbjct: 1 MGIAATMYDSLDNTTAGPEPLKSNIPNKNKSQTDDMRDTFLKMIVTQMQNQDPTKPMENA 60 Query: 56 ELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGT---------- 105 ELTSQLAQI+T+ + KL+ + IS QI + QSLQA+ L+G GV+IP Sbjct: 61 ELTSQLAQIATLESMNKLSDKVSGISSQIGSGQSLQATQLVGKGVLIPRNEIVLAPLKTQ 120 Query: 106 ---------------------------TVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT 138 G ++PFG L + AD V T Sbjct: 121 NDSDNTAISKPTNPLPDDETSRALSVANDNGGDDDASQGDYISSPFGFFLPKMADSVEIT 180 Query: 139 ITDKNGAVVRTIDIGE-LTAGVHSFTWDGTLTDGSTAPN--GSYNVAISASNGGTQLVAQ 195 I DKN A++RTI + ++ +WDG +G + Y + A + G ++ Sbjct: 181 IRDKNRAIIRTISYDTEVKPDIYDMSWDGRDDNGKLVADTNSKYFFDVRAVSNGAEIEVT 240 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 L + V GV G LD+G + L + ++ Sbjct: 241 KLGYTRVNGVTPGTDAPLLDVGIGQSVPLSSIFKVY 276 >UniRef50_A3U109 Related to basal-body rod modification protein (FlgD) n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U109_9RHOB Length = 221 Score = 132 bits (332), Expect = 8e-30, Method: Composition-based stats. Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 10/228 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T S + S++ + + SFL LL AQL NQDP PM+++ SQLAQ+ Sbjct: 1 MVDITGTAAATSGQTLSTVASNKLSADYQSFLKLLTAQLTNQDPLEPMDSSTFVSQLAQL 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V + NT L SISGQ+ N+ LIG V +PG G Sbjct: 61 SQVEQSIQTNTHLESISGQLANAGLTSDLGLIGREVSVPGDLFDLIGGKGTFE------- 113 Query: 125 GVELQQAADKVTATITDKNGAVVRTID-IGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 L A++V A I D G V I+ + +HS W+G ++G+ +G Y I Sbjct: 114 -YVLATTANEVRAIIRDSAGNSVAQIEGLKTGAETLHSVDWNGIGSEGTPVADGIYTAEI 172 Query: 184 SASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A+ G L A A V+ + + L L T V + Sbjct: 173 IATGPEGNVLGASAFTRATVERLTLSGGESVLHLSNGNTALSSLVAAV 220 >UniRef50_B4WBD2 Flagellar hook capping protein, putative n=2 Tax=Brevundimonas RepID=B4WBD2_9CAUL Length = 238 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 17/218 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ AV++ D + S T+ + +FLTLL Q+KNQDP +P+++NE T+Q Sbjct: 1 MATAVSSVDASGRLNSGTTMLASN-------FETFLTLLTTQMKNQDPLSPLDSNEFTAQ 53 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L Q++ V N L S+ A+ IG V + G + Sbjct: 54 LTQMAGVEQQLLTNDLLTSLVAAQS-GNLNNAAAYIGKEVTAAWSATTLKDGKADW---- 108 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 EL A T + D G VV + + G+HSFTWDG + G G Y Sbjct: 109 ----NYELASDAAAATLKVLDSKGKVVWEGPAPDKSQGLHSFTWDGKTSGGEVLTEGVYT 164 Query: 181 VAISASNGGT-QLVAQPLQFALVQGVIRGNSGNTLDLG 217 + +SA + + +Q L V+GV N L +G Sbjct: 165 LKVSAMDSKNANVASQALTQGRVKGVEMYNGEPYLVVG 202 >UniRef50_A7ZB54 Flagellar hook assembly protein n=1 Tax=Campylobacter concisus 13826 RepID=A7ZB54_CAMC1 Length = 235 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 7/230 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + + + + T N+ + +F+ LL+ +L++QDPT+PM+ ++ +Q Sbjct: 11 TTQQKNAEKKANSRIDAAKGTGTNPNSQLDKDAFMKLLLTELQHQDPTSPMDTEKMLTQT 70 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 +Q+++V E N + + Q+ ++ + A + +G V V ++ Sbjct: 71 SQLASVEMQENTNKAMKELVNQLKSNANAYAISALGKMVSTGSNAVTLTDEKKDAKFALY 130 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 + + + NG VVRT D+ E AGVH+ WDG G+ PNGSY + Sbjct: 131 FKTDL------ANGKIEVKNANGQVVRTTDLNETNAGVHNLAWDGKDASGNQVPNGSYTI 184 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + + + + + V+ V + + + ++D+V + Sbjct: 185 SATYTGKDGKEYKTQVGNYPVEAVKFVDGKAMMKVAG-EYVSMDKVSEYY 233 >UniRef50_D0L1M4 Flagellar hook capping protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1M4_HALNC Length = 245 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 13/244 (5%) Query: 1 MSIAVTTTDPTNT----------GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTN 50 M+ + T T+P + + ++S + + +SF+ LL QL+NQDPTN Sbjct: 1 MTTSTTATNPYASLGLAVSSATGSGANSTSGTSGNGAESLDMNSFMKLLTTQLQNQDPTN 60 Query: 51 PMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAG 110 P +N+++ +QLAQ S++ GI +LNTT+ + +SQ +QA+ L+G ++ G T Sbjct: 61 PTDNSQMIAQLAQFSSLQGISQLNTTVNGFQSTLQSSQIMQAAALVGKAAIVKGDTAHMY 120 Query: 111 TGSEEGAVTTTTPF--GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTL 168 + T + V++ A V+ +IT+ +G VV T + + +F+WDGT+ Sbjct: 121 NSTAADGTTKASGILGAVDIPTGATSVSVSITNASGQVVDTQSVPVSGSARPTFSWDGTM 180 Query: 169 TDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYG-TTTLDEV 227 DGS AP G+Y V +AS G AQ A++ V +SG L+L L +V Sbjct: 181 PDGSVAPAGAYTVTANASVNGQGQAAQTYVGAVISSVGVTSSGPQLNLDGGLPPAKLSDV 240 Query: 228 RQII 231 +II Sbjct: 241 VEII 244 >UniRef50_Q5LMU9 Basal-body rod modification protein FlgD n=1 Tax=Ruegeria pomeroyi RepID=Q5LMU9_SILPO Length = 222 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 83/231 (35%), Gaps = 14/231 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M V +T P T + +++ S ++ +F+ +L Q K Q+P P++++E +Q Sbjct: 1 MVETVHSTRPGATSQAPQTTTPEKRSLSS-DFDTFIRMLTTQAKYQNPLEPLDSSEYAAQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V K N TL ++ ++ + + SN IG V G T Sbjct: 60 LAQFSMVEQQTKTNDTLTALVEKLGATDMAKLSNWIGKEVRAVAPANFDG---------T 110 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 AADK + D G V + +W G DG NG Y+ Sbjct: 111 PVTISPAPLAAADKAFLVVRDAKGETVERYQV---PVSADPISWSGLNDDGEPRDNGLYS 167 Query: 181 VAISASNGGT-QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A+ + L + V N L L + V + Sbjct: 168 FAVQSYKADELLLEEAAAVYHPVSEAQIENGEVILILEGGQAILANMVTGV 218 >UniRef50_Q0FMJ5 Flagellar hook capping protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FMJ5_9RHOB Length = 223 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 9/222 (4%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T +++S + S ++ SF+TLL AQ++NQ+P PM++ SQLAQ+S V Sbjct: 8 TGNVTGAGTTASSSMSQLSEDYESFITLLTAQIQNQNPLEPMDSTTFISQLAQLSQVEQS 67 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 +N L IS Q+ + ++ NLIG V+ P + G A L Sbjct: 68 VAVNDNLEGISSQLSSMSAIAGLNLIGRSVVAPTEQLALEAGGAAVA-------SYRLAG 120 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGV-HSFTWDGTLTDGSTAPNGSYNVAISASN-G 188 A V+ +I +G ++R+ D +AG H+ TWDG +G P GSY + +SAS+ Sbjct: 121 EASNVSMSIVSADGTLLRSFDGLSGSAGELHNVTWDGMDYEGLPLPEGSYYMVVSASDAA 180 Query: 189 GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G + AQ + V G+ N TL + GTT + +I Sbjct: 181 GNSVPAQTYAASRVTGMTYENGLATLQMAHGGTTLAGLIEEI 222 >UniRef50_A0Z355 Flagellar hook capping protein n=3 Tax=unclassified Gammaproteobacteria RepID=A0Z355_9GAMM Length = 239 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 4/223 (1%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 + + + GS FL L++AQL+NQDPT PM+ SQLAQ + VSGI+ Sbjct: 18 SLNPTRAAEKGKAGSAEEMGSEEFLQLMIAQLENQDPTKPMDQMAFMSQLAQFTQVSGIQ 77 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF--GVELQ 129 +LN + ++ + Q+LQAS ++G V V++ Sbjct: 78 ELNESFSGLTETLTGQQALQASQMVGRSVSTSSNVGNLSVLGTNTTGDPVMRMSASVDMG 137 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 A + + D NG +V + + + G WDG +G+T P G Y ++ + G Sbjct: 138 NNATGGSFFVQDMNGQLVFSGTLPAGS-GTLPVVWDGVDAEGNTLPPGQYRISAEVARNG 196 Query: 190 TQLVAQPLQFALVQGVIRGNS-GNTLDLGTYGTTTLDEVRQII 231 A V V G TL+L + ++EV++ Sbjct: 197 ANQAASVFAHEQVVSVAIGAGNTVTLNLANGQSLGINEVKEFF 239 >UniRef50_C8RX78 Flagellar hook capping protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX78_9RHOB Length = 217 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 83/227 (36%), Gaps = 13/227 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T+ + +SS+ + A +FL ++ QLKNQDP NP+++ + QLA Sbjct: 1 MDIASSTSAATAAATSSNSGKTAIASDFETFLRMMTTQLKNQDPMNPIDSADYAVQLATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S+V K N+ L ++ Q Q + +GH ++G Sbjct: 61 SSVEQQAKTNSLLEAMGAQFGLMGMAQMAGWVGHEARAAAPVWISGD---------PVSL 111 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 AD + D G +V + + A W+ + G+Y + Sbjct: 112 APNPAFGADSAVLVVRDFEGNLVNRV---NIPASADPLEWEPVDQLDAPLAEGTYTFQLE 168 Query: 185 ASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + G L + +A + V G +G T+ L + V I Sbjct: 169 SYAGEDLLATTDVESYARIVEVRGGAAGATVVLEGGIEVPVAAVTAI 215 >UniRef50_A4U4K0 Basal-body rod modification protein flgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K0_9PROT Length = 220 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 8/200 (4%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 F+ LL AQL+NQDP +P + E T+QL Q S + N L + ID Sbjct: 25 DYDMFIQLLCAQLENQDPLDPTDATEFTNQLVQYSNLEQQMATNDKLDEVLSSIDLMSMS 84 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 +GH V T S + T + L AA VT T+TD++G VV Sbjct: 85 SGVGYMGHTVEAE-----GDTISVQDDGTVDAAWVYSLDSAATDVTLTVTDEDGNVVWEG 139 Query: 151 DIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGN 209 G+ G + FTWDG +DG+T G+Y ++++A++ G + + V GV + Sbjct: 140 S-GDAAKGRNDFTWDGKDSDGNTVDGGAYTLSVAATDADGAAIGSTTYVSGKVTGVTSSD 198 Query: 210 SGNTLDLGTYGTTTLDEVRQ 229 L+LG G TLD + + Sbjct: 199 GTTILELGEMG-ITLDAITR 217 >UniRef50_D1U365 Flagellar hook capping protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U365_9DELT Length = 225 Score = 131 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 8/224 (3%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 TT+ + +++ ++ + ++ + FL LL+ QL+ QDPT P++N E+ +Q+ Q S Sbjct: 5 TTSYYESLLTASSETADTSTASTSLGSMDFLNLLITQLQYQDPTEPVDNTEMVNQMTQFS 64 Query: 66 TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFG 125 + + + L ++ + S + A + +G V G ++ Sbjct: 65 QLESLTSIEDKLDELTSSLSASSTTSAISYLGKEVEASGYSLSKSGDDIS-------DLY 117 Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 + L AA+ VT I + +G +V T + L AG +SFTWDG +DGS +G+Y VAISA Sbjct: 118 LTLDDAAESVTVNIYNSSGTIVDTETLSALEAGSYSFTWDGLDSDGSEVADGTYYVAISA 177 Query: 186 SN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + G + V G+ + G L L T L +V Sbjct: 178 EDSNGDSVDVSTTTTGTVAGISTTSDGVVLILDDGRTVNLSDVT 221 >UniRef50_Q16DP6 Flagellar basal-body rod modification protein, putative n=2 Tax=Roseobacter RepID=Q16DP6_ROSDO Length = 226 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 13/227 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + T ++ + + + +FL +L AQ + QDP P++++E +QLA Sbjct: 1 MDILNAQATQPTRQLGTAQASNSAALSSDFETFLKMLTAQARFQDPLEPIDSSEYAAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S V N L + Q+ ++ Q + IG G+ + Sbjct: 61 QFSMVEQQVLSNDLLTELGAQLGSNSIGQMAAWIGMEARTTAPVAFDGSPITVLPKS--- 117 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + AD+ +G+ V+ + T G W G +G+ P G+Y+ Sbjct: 118 ------EAGADEAYLIAYGPDGSEVQRQQV---TPGTDPIEWLGLDDNGAALPIGNYSFV 168 Query: 183 ISASNGGTQLVAQP-LQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + + G + P ++ + R S L + +V Sbjct: 169 VESRAVGQTIGTSPAETYSRITEARREGSDTVFILNGGSPVSAADVS 215 >UniRef50_Q1K368 Flagellar hook capping protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K368_DESAC Length = 220 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 10/209 (4%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISG 82 T S+ A ++ FL LLVAQL+NQDP P N E +QLA S++ N L S+ Sbjct: 18 ATASSKALGEADFLELLVAQLENQDPLEPQSNTEFIAQLATFSSLEQQTMTNNKLDSVIS 77 Query: 83 QIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDK 142 + Q L +++G V+ E + L + A VT I D+ Sbjct: 78 ATADMQQLAGIDMLGKTVVAQSDNFYLNGDQVEIGMY--------LPEDATSVTVNILDE 129 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLV-AQPLQFAL 201 + +VV TID +L+AG + WDGT DG+ P G Y++++ A N ++ PL Sbjct: 130 DESVVATIDSSDLSAGDNFLDWDGTDMDGNPLPEGEYSLSVEAYNSDGEIDNVLPLIKTT 189 Query: 202 VQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V V SG+ L G L + + Sbjct: 190 VDEVAMTGSGSVLS-TDAGEILLSSIYSV 217 >UniRef50_A5IJB4 Flagellar hook capping protein n=6 Tax=Thermotogaceae RepID=A5IJB4_THEP1 Length = 224 Score = 130 bits (325), Expect = 5e-29, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 9/201 (4%) Query: 30 DLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQS 89 + +FL LL+ +L+ QDP PME ++ SQL+Q++++ I L + + + Sbjct: 27 LDKEAFLRLLLQELEMQDPLEPMETKDMISQLSQLASLEQITNLTSAVKDFVEAQTSVNP 86 Query: 90 LQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRT 149 Q ++LIG V++ TV G + + V I D+NG VVRT Sbjct: 87 AQLASLIGKYVVVKNNTVNLVDGQSD--------SIIFNVDEDAHVVVQILDENGKVVRT 138 Query: 150 IDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN 209 D+G + AGVH++ WDG G + +GSY I ++ +V+ V N Sbjct: 139 EDLGTVQAGVHAWQWDGRDDSGISVEDGSYTYHIYKLTSSGLEEIGGMEGGVVEAVQIKN 198 Query: 210 SGNTLDLGTYGTTTLDEVRQI 230 L +D + +I Sbjct: 199 GEG-FVLVNGSLYPVDSILEI 218 >UniRef50_Q4K867 Basal-body rod modification protein FlgD n=15 Tax=Pseudomonas RepID=Q4K867_PSEF5 Length = 242 Score = 130 bits (325), Expect = 5e-29, Method: Composition-based stats. Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 10/231 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + T + ++++ + + +FL LLV QL NQ+P +P +N+ +QLA Sbjct: 17 ANSSKTTSNTSADGLAAATNSATGKQSLGKDAFLKLLVTQLNNQNPLDPQDNSAFVAQLA 76 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q ST+ GI LN+++ +I+G +SQ+LQAS+L+G V++ TG+ + + + Sbjct: 77 QFSTLEGITTLNSSVNAITGNYKSSQALQASSLVGRSVIVQ-------TGTTQVDTSKSM 129 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V + + + VT T+TDK+G V+TID+G AG SF WDGT TDG+ A G+Y Sbjct: 130 TGSVTVPSSVNSVTVTVTDKDGNTVKTIDMGSQKAGNASFVWDGTKTDGTKADPGNYTFK 189 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGT-TTLDEVRQI 230 S + G A V V L+L + L +V+ I Sbjct: 190 ASTTIDGKGTDLITYLPATVNSVTISQTGGELMLNLAGMSSPIALSKVQTI 240 >UniRef50_Q1GCA6 Flagellar basal-body rod modification protein FlgD n=8 Tax=Rhodobacterales RepID=Q1GCA6_SILST Length = 231 Score = 130 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 13/230 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNA-ADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M+ AVT T + ++ + + ++A +FL L+ Q K QDP PM++++ T+ Sbjct: 1 MTTAVTGVGTQQTTTAGGTAGTQSATSALTSDFETFLRLMTTQAKYQDPLEPMDSSDYTA 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 QLAQ S+V N TL S+ + S Q + +G V G+ S A Sbjct: 61 QLAQFSSVEQQVLTNETLTSMLTALSLSNMSQLTGWVGREVRAQAAGYFDGSSSVSIAPN 120 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 ADKV I D A V +D+ + W+G DG+T P GSY Sbjct: 121 P--------AAVADKVEMIIYDDQEAEVGRVDLPVSAE---PYQWNGEDGDGNTLPEGSY 169 Query: 180 NVAISASNGGTQLVAQ-PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + I +S+ G ++++ + V+ + L L + V Sbjct: 170 SFVIESSSNGEVILSELAEVYGRVEETQNVDGEVALILESGSAILATSVT 219 >UniRef50_B8DS26 Flagellar hook capping protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS26_DESVM Length = 222 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 8/224 (3%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 ++ S TS+SS + +FL LL+A+L+NQDPTNP +N E+ +Q+A STV Sbjct: 2 TTISSLASATSASSTSSGGTTLDSDAFLQLLIAELQNQDPTNPTDNTEMINQIASFSTVE 61 Query: 69 GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVEL 128 + LN T SI + A + IG V+ TT L Sbjct: 62 QLSALNDTATSIYDSLTAMSLNSAVSFIGQSVLAQ-------GDDISKTDDATTVVSFTL 114 Query: 129 QQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN- 187 + A +TA + + +G ++ ++ +G +G +SF+WDGT G+ A NG+Y+V A + Sbjct: 115 ESDAQTLTAHVYNSSGTIINSVSLGASDSGTYSFSWDGTNYTGAEAANGTYSVVFEAYDE 174 Query: 188 GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 G L + V GV N L L T L++V ++ Sbjct: 175 DGDSLEVSTMVAGTVSGVSVENGTTVLTLSDGRTVNLEDVYSVV 218 >UniRef50_B6AV37 Possible FlgD protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AV37_9RHOB Length = 224 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 91/227 (40%), Gaps = 13/227 (5%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + T P ++ + + +FL +L Q++NQDP NP+++ + QL Sbjct: 3 ATTPTLQTPPLFSGQRDTNQAQKTAALGSDFETFLKMLTVQMENQDPLNPVDSADYAVQL 62 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 A S+V + N L S++ + + + +G V G+ E A Sbjct: 63 ATFSSVEQQVRTNDLLSSLAATMASGGVESLGHWVGMDVRAGNEGYFDGSDIELIAPD-- 120 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 ++ AD+ + D+ G + + A F+WDG +G AP+G+Y Sbjct: 121 -------RKDADQRILVVRDETGGI---TTQENIAASGTDFSWDGNFANGVEAPHGTYTF 170 Query: 182 AISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDLGTYGTTTLDEV 227 ++ + N GT L + +Q V+ + + L L + +V Sbjct: 171 SVESFNNGTLLATESVQAYNRVREAVIEDGEAMLILKGGNSVAPSDV 217 >UniRef50_A5ESH7 Putative flagellar basal-body rod modification protein FlgD n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESH7_BRASB Length = 235 Score = 129 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 18/239 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSS-------SLTGSNAADLQSSFLTLLVAQLKNQDPTNPME 53 M I T++ + + + + + AD SFLTLL QL +Q+P +P+ Sbjct: 1 MGIESTSSPQKAVATGSKTGTEEPVKPSASARTGIADNFQSFLTLLTTQLNHQNPLDPLN 60 Query: 54 NNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGS 113 N+ T QL Q + V K NT L + ++QS QA L+G ++ G+ G Sbjct: 61 VNQFTQQLVQFAQVEQQLKGNTLLERLVEAQKSTQSTQALMLVGRTAVVDGSEASLAKGG 120 Query: 114 EEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGST 173 + T ++ + G +V + L +G SF WDG ++G+ Sbjct: 121 SA--------VWNLRSPKSATATVSVRNVTGQLVYSATR-ALNSGDTSFAWDGQASNGAM 171 Query: 174 APNGSYNVAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 P G Y + + A + GG + +V+ V S L + LD VR++I Sbjct: 172 CPPGQYKLVVDAKDIGGKPIAVAAEAQGVVESVDLTKSPIMLSI-GGRNYPLDSVRRVI 229 >UniRef50_A4EG00 Flagellar basal-body rod modification protein, putative n=2 Tax=Rhodobacteraceae RepID=A4EG00_9RHOB Length = 220 Score = 129 bits (323), Expect = 9e-29, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 84/225 (37%), Gaps = 13/225 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T PT ST + S + FL +L AQ+K QDP NP+++ + +QLA Sbjct: 1 MDVTQPTQQVASTPPAPSAASTQIGSDFEVFLQMLTAQMKYQDPLNPVDSTDYATQLATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V N L S++ Q++ + + L+G V G Sbjct: 61 SGVEQAVLTNDLLKSLTTQMNTGGLVDMAALVGKQVKSTAPAYFDGQPLTLLPAQ----- 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 AAD + ++ G V+ + G + W G +GS G Y I Sbjct: 116 ----NVAADTAELVVRNEAGDEVQRT---AIDPGAQTLEWAGVSPNGSPFAAGIYQFEIV 168 Query: 185 ASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + +G + P+ ++ V V S L L + D+V Sbjct: 169 SKSGDDIIAQTPVETYSTVNEVRLEGSATILVLSGGVSVASDQVT 213 >UniRef50_A4WT49 Flagellar hook capping protein n=5 Tax=Rhodobacter sphaeroides RepID=A4WT49_RHOS5 Length = 225 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 15/233 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 T D + +++ ++ Q FL LL QL+NQDP PMEN E +Q+A Sbjct: 2 TTTTPVDGSYAAGLAMKTATQAKGSSNLGQEDFLKLLTTQLQNQDPFQPMENGEFLAQMA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q STVSGIE+LN TL I + + ++ A++LIG V++PGT A Sbjct: 62 QFSTVSGIEQLNGTLSGIGEGLGSFRTATAASLIGRSVLVPGTLARADEA-------GGV 114 Query: 123 PFGVELQQAADKVTATITDK-NGAVVRTIDIGELTAGVHSFTWDGTLTDG--STAPNGSY 179 L A+ V T + G ++ + +G AG +F WD S P Sbjct: 115 HGAATLTDPAEAVVVTYSHSVTGQLLHSQTLGPQKAGQVNFGWDEVPASLVSSRVP---L 171 Query: 180 NVAISASNGGTQLVAQPLQFALVQGV--IRGNSGNTLDLGTYGTTTLDEVRQI 230 V++SA+N + P +A V V G L++ G + V Sbjct: 172 RVSVSAANADGSVPLAPSVYARVLSVGSTTDGRGTLLEVEDQGRVPAESVTSF 224 >UniRef50_A3T090 Flagellar hook assembly protein FlgD n=2 Tax=Sulfitobacter RepID=A3T090_9RHOB Length = 223 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 10/229 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + T N S SS+ + + + FLTLL AQ++NQDP P+++ + +QLA Sbjct: 1 MLTSQTLLNNFTSSNQSSAQDSLGQLGEDYTKFLTLLTAQIQNQDPLEPVDSTQFVAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V + NT L +++ QI +L ++L+G V + V+ G+ Sbjct: 61 QLSQVEQAVQTNTQLETLTSQISGLLNLGGTDLLGRDVTVQSDVVMLEDGTS-------- 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTID-IGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 E+ A +V+A I D G VRTI+ + ++ + WDG G+ G Y V Sbjct: 113 LTSYEVGAGAAEVSAKIYDPLGRNVRTINGLSTVSGTANPLGWDGKDDYGNAQLAGKYTV 172 Query: 182 AISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 ++A + G + QP + A V+ V L T + V+ Sbjct: 173 VLTAKDAAGNNIAIQPSRSARVEDVRFREGEIIFGLDGGETASSITVKS 221 >UniRef50_B5EEN7 Flagellar hook capping protein n=5 Tax=Geobacter RepID=B5EEN7_GEOBB Length = 221 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 9/225 (4%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 + +T ++ + + + FL L V QL+NQDP NP + + SQLAQ++ Sbjct: 1 MVTDVTSTATTAAAQAEMKKSTGMNKDDFLKLFVTQLQNQDPLNPQDGTQFISQLAQLTQ 60 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V N+ L ++ Q NS +L A LIG V G + +G + + Sbjct: 61 VEQAYNTNSNLQNMLNQGSNSATLAAVTLIGKQVEAQGNQLELKSG-------SPSTIQY 113 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 +L AAD+VT ++TD++G VVRT+ G AG S TWDGT G+ G+Y+ ++SA Sbjct: 114 KLDSAADQVTVSVTDQSGKVVRTLSGGSKGAGAGSVTWDGTDDKGTQLAAGTYSFSVSAK 173 Query: 187 NG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G+ + A L V GV + L +G L EV + Sbjct: 174 TASGSNVTAAGLVMGKVDGVDMSGASPMLSIGAL-KLKLTEVTSV 217 >UniRef50_B4RG78 Flagellar hook assembly protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG78_PHEZH Length = 230 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 13/208 (6%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 T +S++ + A+ +FL LL QLKNQDP +P+++N+ T Q+ Q++ V N Sbjct: 7 SGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVEQQLLTN 66 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 L S+ ++ A +LIG V G L + A+ Sbjct: 67 DLLKSLVSN-TSNGVSTAVSLIGKEVRAATVDAKLKDGQAAWI--------YTLPRDAND 117 Query: 135 VTATITDKNGAVVRTID--IGELTAGVHSFTWDGTLTDGSTAPNG-SYNVAISASNGG-T 190 V + D NG VRT+ AG H TWDG +G P+G Y++ +SA + Sbjct: 118 VKLEVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLPDGGVYSLKVSAKDSDFA 177 Query: 191 QLVAQPLQFALVQGVIRGNSGNTLDLGT 218 + + +V GV + N + + Sbjct: 178 TVPSTVSIEGIVTGVEQSNGETLITVNG 205 >UniRef50_B3EBG4 Flagellar hook capping protein n=2 Tax=Desulfuromonadales RepID=B3EBG4_GEOLS Length = 223 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 9/227 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 TT + + T++S +FL L +AQ++ QDP P + N++ SQ++Q+ Sbjct: 2 STTVSGVTSASTATAASDAMKQTFGMDTDAFLKLFIAQIQYQDPLAPQDTNDMLSQISQL 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 + V T L ++ NS +L + LIG ++ S T Sbjct: 62 TQVEQSYNTATALNNLLTAQSNSLALSSVGLIGKDIVAL-------GDSLNFDGTNPVTL 114 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 + A T TI +++G VVRTID+G G ++ WDG G+ G+Y+ +IS Sbjct: 115 SYQKTSATTGTTLTIKNESGQVVRTIDLGAQEVGDATYQWDGKDAQGNVLAAGAYSFSIS 174 Query: 185 ASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ G A GV N + + +V ++ Sbjct: 175 GTDALGETQQAITYTTGRADGVTFDNGVAYITI-GAVLVPFADVMRV 220 >UniRef50_A8LNK4 Flagellar hook capping protein FlgD n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LNK4_DINSH Length = 220 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 86/226 (38%), Gaps = 13/226 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T T S S+ T + A +FL +L QL+NQDP P+ + +L QLA Sbjct: 1 MDPVTTTRTATPQPSGSAQTATAIASDFETFLRMLTTQLENQDPLEPVASQDLAVQLATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V + N+ L + Q+ Q ++ +G + G G+ E Sbjct: 61 SGVEQQTQTNSLLEDLGSQMGLMSLSQLASWVGMDALAEGNVHFDGSPVE---------I 111 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 + A+K + ++G V+ L G + W G +G+ P+G YN+ + Sbjct: 112 KPNIPALAEKAELVVYRRDGTEVQR---NTLEPGTETVLWAGVGANGNPLPSGVYNLQVE 168 Query: 185 ASNGGTQLVAQPLQFAL-VQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 A L +P+Q V V N TL + V Sbjct: 169 AFANNESLPTKPVQAYREVVEVKAVNGKTTLVTAGGIDVAANAVVS 214 >UniRef50_Q28JI8 Basal-body rod modification protein FlgD n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JI8_JANSC Length = 221 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 13/227 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + T+ G +T + T ++ FL LL Q++NQDP NP ++ E T+QLA Sbjct: 1 MDILPAGQTSPGTATAVQDNTTAASITSDFDMFLRLLTTQMQNQDPLNPSDSTEYTAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 S V + N L + + Q S IG G T Sbjct: 61 TFSGVEQQVETNDLLRDLQASFASMNMGQLSGWIGMEARADMPVNFTGQ---------PT 111 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + AD+V + ++ G VV G F WDG DG PNG+Y ++ Sbjct: 112 TVQITPNSFADRVELVVRNQAGDVV---ASTPAVLGQEPFAWDGRGNDGFPLPNGTYTLS 168 Query: 183 ISASNGGTQLVAQ-PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 + +G L + F+ + + + T D V+ Sbjct: 169 AQSWSGENILDERAAFIFSEISEAQTIAGEVYVTMENGVTIPADTVQ 215 >UniRef50_A0RLY6 Flagellar hook assembly protein n=3 Tax=Campylobacter RepID=A0RLY6_CAMFF Length = 263 Score = 128 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 8/221 (3%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 T +S + T + + +FL LL+ +L+ QDPT PM++ ++ Q +Q++T+ Sbjct: 25 QTEAEKLNNASGTGTNPYSQLDKDAFLKLLLVELQYQDPTEPMDSAKMLEQTSQLATLEM 84 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 E N + ++ Q+ +S S+ A + +G + T++ F + Sbjct: 85 QENTNKVMKQLTTQMQSSLSMTAMSALGKMAN-------LSNAVSKDTTTSSVDFSLYFP 137 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 + I D + +V+ I EL +G++ F WDGT +G G Y + + ++ Sbjct: 138 NDVKSGSIQIYDSSENLVKNIKFDELKSGINKFNWDGTDNNGDITLPGEYLIKATYTDTS 197 Query: 190 TQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L V+ V N + + ++D++R+ Sbjct: 198 GNSGESILGSYPVEAVKFVNGIAQIKIAG-EYVSMDKIREF 237 >UniRef50_Q15R84 Flagellar hook capping protein n=2 Tax=Alteromonadales RepID=Q15R84_PSEA6 Length = 228 Score = 128 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 8/231 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M + ++ + SN Q F +LL QL NQDP+ P++N+++ +Q Sbjct: 1 MDTLIKNGLNSDLYWQPETVPVADESNQNLSQEDFFSLLTEQLANQDPSKPVDNDQMVAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 + + GI +LN + + + ++Q+LQAS+LIG V++ G + + + Sbjct: 61 MTSFTMADGISQLNEKFETFATSMTSNQALQASSLIGQQVLLQGDVAHMASEGQGVS--- 117 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 V TI +++G++V+T+DIG G F WDG G+ P G+Y Sbjct: 118 ---GVVINDSTTLNTKITIENESGSIVKTLDIGTQPVGNIQFNWDGKDAAGNFMPPGNYV 174 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQ 229 V + G V V + G L+L + LD+V Q Sbjct: 175 VKAQGNVSGEPQQLVTAVNRHVDSVSLAGSSQGVILNLDGDVSVKLDDVIQ 225 >UniRef50_A9DSD1 Flagellar hook capping protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DSD1_9RHOB Length = 222 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 10/205 (4%) Query: 29 ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ 88 + +SFLTLL AQ+ NQDP NP+++ + SQLAQ++ V N +L IS + Sbjct: 26 QESYNSFLTLLTAQISNQDPLNPVDSTQFVSQLAQLTQVEQSIATNASLEQISTMLSTVG 85 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 ++ LIG V++P + V +L A+ VT I ++G +VR Sbjct: 86 AMSDLQLIGRDVLVPSSQVRMTEDEFP--------LSYQLNAGAEDVTIRIYSEDGTLVR 137 Query: 149 TIDIGELTAGVH-SFTWDGTLTDGSTAPNGSYNVAISASN-GGTQLVAQPLQFALVQGVI 206 + G W+ + G P ++ V I+A++ G + PL A V V Sbjct: 138 EMPGPSTAEGKVIDVDWNRLDSVGLPVPPDTFRVEITATDVSGNDVGVTPLTRAEVTRVN 197 Query: 207 RGNSGNTLDLGTYGTTTLDEVRQII 231 G L+L VR ++ Sbjct: 198 FTGQGAELELDNGEQVLSHTVRSVL 222 >UniRef50_B2UJX2 Flagellar hook capping protein n=6 Tax=Ralstonia RepID=B2UJX2_RALPJ Length = 215 Score = 127 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 136/224 (60%), Gaps = 11/224 (4%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T + ST +S++L+ ++ DLQ++F+ LLVAQL+NQDP NPM+N+++TSQLAQI+T Sbjct: 2 TVTSATSTPSTNTSNNLSITSGTDLQNTFMQLLVAQLQNQDPLNPMDNSQMTSQLAQINT 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V+GI++LNTT+ S++ Q + + QAS+LIG V +P +T+ +GS + Sbjct: 62 VNGIQQLNTTMSSMATQ---NAATQASSLIGRTVQVPSSTLTLASGSANFG--------I 110 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + AD V TI D +G VR +D+G ++AG ++TW+G G++ +G+Y++++SA+ Sbjct: 111 SVPNGADDVVVTIKDASGNTVRKVDLGGMSAGSGNYTWNGKNDSGTSVADGTYSISVSAT 170 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 GG A L V GV N L L + T L ++ I Sbjct: 171 LGGKAATANALGADKVTGVTITNGTTQLQLASGNTAKLSDITTI 214 >UniRef50_Q0ARV5 Flagellar hook capping protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARV5_MARMM Length = 221 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 11/225 (4%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 D + +T+ S + + + AD FLTLL Q+KNQDP NP+++ + +QL S+ Sbjct: 1 MVDAVSGLGATSPSLANSQTGLADNFEMFLTLLTEQMKNQDPLNPLDSTQFVNQLVDFSS 60 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V N L ++ + + + IG + G Sbjct: 61 VEQQIAQNQNLENLLLLQSAAAQSASVSYIGRVATALTPQAMLANGEASWE--------Y 112 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + + A + I D++ +V D GE TAG H FTWDG G+ +G Y++ I A Sbjct: 113 NVPEEATTSSIIIRDEDDRIVARRD-GETTAGTHDFTWDGLGDGGAALDDGVYSMEIIAQ 171 Query: 187 N-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 N G L A V GV S +++G L V I Sbjct: 172 NADGDDLPVTIRAAAQVTGVDLSGSEVIVEMGGIR-VPLSSVMSI 215 >UniRef50_Q2LKA7 FlgDL n=1 Tax=Aeromonas hydrophila RepID=Q2LKA7_AERHY Length = 231 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 15/228 (6%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 + + T ++++ L++ FL ++VAQ++NQDPTNP++ + +QLAQ Sbjct: 14 STSQRTATPDIAPNSAAAGQNPQGGMQLRNEFLQMMVAQIQNQDPTNPLDGAQYVTQLAQ 73 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 S V G+E L +D Q LQ++ LI VM+P T+ + T Sbjct: 74 FSMVEGVESLKVLQQKSINMMDTQQVLQSTALIDKEVMVPSKTL-------TQSAEKTIR 126 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 +EL AAD+V + D++G +V T + G+ AG G + P G Y+ + Sbjct: 127 GQIELAGAADQVELKVYDEHGTLVATKNWGDSKAG-------GLDYELPPLPAGEYSFEV 179 Query: 184 SASNGGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQI 230 AS G ++ + V+ V G L + G L Q Sbjct: 180 KASLDGVATTSKNFVASKVERVTLPGTGEIMLQVAGVGDVPLFSAIQF 227 >UniRef50_A4U361 Basal-body rod modification protein FlgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U361_9PROT Length = 226 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 15/229 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +++T + T + + +G+ A+ +FLT+L QLKNQDP +PM++ E T+QL Sbjct: 1 MSITGIESTGASNNAAN----SGTRLAENFDTFLTMLTVQLKNQDPLSPMDSTEFTNQLV 56 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S V N L ++ + QA IGH + + + V G + Sbjct: 57 QFSAVEQQIASNKNLENLISVTQTNTKAQAIAYIGHTIEVAASAVPLQDGKAAFS----- 111 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 L + A +T I D +G ++ + AG WDG T G +G+Y + Sbjct: 112 ---YTLPEDARSITVAIKDTSGKLIANLTAKT-AAGRTEMAWDGRDTTGKVVEDGAYKIE 167 Query: 183 ISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 I+A+N G + + V V ++ + +G + ++++ + Sbjct: 168 INATNAEGETMEVGTTVYGRVTDVASDSTETLIAMGKVVS-KVEDILTV 215 >UniRef50_C5SMJ0 Flagellar hook capping protein n=2 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMJ0_9CAUL Length = 224 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 11/227 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 VT+ T+ S+ +SS+ + + A +FL LL AQ+KNQDP +PM++ + T+QL Q Sbjct: 2 VTSVSNTSATNSSATSSTSSTNGLATTYETFLGLLTAQIKNQDPLSPMDSTQWTNQLVQY 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 ++V K N L S+ G + + N+IG + T Sbjct: 62 TSVEQQLKANEYLKSLVG-LGAGNMASSVNMIGKTAIADIDTQTFKDKPLTW-------- 112 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 EL A +V + D +G V +L G ++FTWDG + G+T G Y + ++ Sbjct: 113 HYELASTASQVGVEVLDADGKTVWKGTSDQLNKGDNTFTWDGKDSTGNTVKEGDYTLKVT 172 Query: 185 ASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 A++ +A + V + L +G + + + Sbjct: 173 ATSASGSAIANAISVQQRVDATELIDGEIVLRMGN-SLIAMSAITGV 218 >UniRef50_A6W1A4 Flagellar hook capping protein n=2 Tax=Marinomonas RepID=A6W1A4_MARMS Length = 234 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 13/226 (5%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T+ T A Q+ FL L + QLK QDPT P + N++ +Q++Q S++ Sbjct: 19 TEAAKTKAGIEKPEVKKDEAALADQNVFLKLYIEQLKGQDPTAPQDTNDMVAQMSQFSSL 78 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 + ++ L +++ + ++Q+L AS L+G +++ G+ V G E + Sbjct: 79 ERLTSISDQLENMATSLTSNQALSASTLVGKSILMDGSKVKVGDNVEAVQLKA------T 132 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 + + + T I D + +VRT ++ + WD +G+ P G Y A S++N Sbjct: 133 IPENSQAATLKIYDADNRLVRTAELST-----GEYKWDKLDDEGNVLPPGEYRFAASSTN 187 Query: 188 G-GTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQII 231 G +QGV G +G L++ +G L +I+ Sbjct: 188 EQGEISAISTQVPTRIQGVTINGENGTVLNVENHGKIKLTNELEIL 233 >UniRef50_B9L649 Flagellar hook capping protein n=2 Tax=Nautiliaceae RepID=B9L649_NAUPA Length = 223 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 7/207 (3%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 ++ + +F+ L +A+L+ QDPT+PM+ +++ Q A +ST+ + + +L ++S + Sbjct: 20 NPDSQLDKDAFMKLFLAELQMQDPTDPMDTDKMLEQTAYLSTMEMNDNMQKSLDNLSNVL 79 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 + + IG V + I DKNG Sbjct: 80 STTSQFSTLSAIGKMADTGYRYVNVTDDDNSVNFDLYFGDDI------ASGNVIIKDKNG 133 Query: 145 AVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQG 204 VV+T + T GV +F WD +G P+ +Y V+ + + + L ++ Sbjct: 134 NVVKTFPLEAHTKGVLNFDWDLIGDNGERVPSDTYEVSAEYTTPDGKDMTTALGAYPIES 193 Query: 205 VIRGNSGNTLDLGTYGTTTLDEVRQII 231 V N LG+ E+++I Sbjct: 194 VRFENGVPYAKLGSN-YLPFSEIQEIY 219 >UniRef50_B9Z358 Flagellar hook capping protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z358_9NEIS Length = 230 Score = 126 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 13/236 (5%) Query: 1 MSIAVTTTDPTN--TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 M++ TT +P ++TSSSS++ S+A +Q+ FLTLL QLK+QDP NPMENNE+T Sbjct: 1 MTVTSTTNNPYTVLNTGNSTSSSSVSASSAEGIQNRFLTLLTTQLKSQDPLNPMENNEIT 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 SQ+AQIS V+G+E L+ ++ S+ +QSL A++L+G MI G T+ G Sbjct: 61 SQMAQISQVTGLENLSKSINSLLQSQYGTQSLLAASLVGKSAMIDGNTLTLAQG------ 114 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 T GV L +A + T+ + NG V+ T + + +G+ +F WDGT DG+ A G Sbjct: 115 -GTAQGGVILDGSAQNLAITVKNANGEVIDTFTMNNVDSGLTTFNWDGTDKDGNAAAAGV 173 Query: 179 YNVAISASNGGT----QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y +++A+N + A+PL V V+ + G + + Q+ Sbjct: 174 YTFSVAATNESNGKTTSVTAEPLSNQHVDAVVWDKGSPYIVTPQGGRVAIANIVQV 229 >UniRef50_A4C6H0 Flagellar basal body rod modification protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6H0_9GAMM Length = 240 Score = 125 bits (314), Expect = 8e-28, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 19/239 (7%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 + +++ + + QS F TL+ QL QDP NP +N + +Q+ Sbjct: 8 SQSSSFVDSLRSTKDEKIQTAEEANELSQSDFFTLMTKQLSMQDPMNPTDNEAMMAQMTN 67 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 +S G+ + T + + ++Q+LQAS+L+G V+I V G Sbjct: 68 MSIAEGVSNMATKFDQFAVSMTSNQALQASSLVGRNVLIDTHYVQNTPG-------EPIT 120 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 + L+ A + I D+ G VV I + G F WDG + G+ P G Y + Sbjct: 121 GRIPLEGPASDIKVRIEDERGIVVGEIPLPASNGGNIEFAWDGKDSQGNVVPEGMYKIRA 180 Query: 184 SASNGGTQ----------LVAQPLQFALVQGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 + + V V G +G L+ G+ +V ++ Sbjct: 181 VGLMQNVPDENGVLKARHVELSVQARSRVDSVSMGQNGTGLVLNFNGLGSVKFQDVLEV 239 >UniRef50_C1SLD5 Flagellar hook capping protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD5_9BACT Length = 232 Score = 125 bits (314), Expect = 9e-28, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 14/233 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + V+ T +T TS + QS FL L + QL+NQDPT+PM+++ + Q A Sbjct: 1 MLVSNTTTVDTKQYDTSDIEYNNTQGELSQSDFLNLFITQLQNQDPTDPMDDSAMMEQTA 60 Query: 63 QISTVSGIEKLNTTLGSI----SGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 + V + + +L I S + AS IG V G G + Sbjct: 61 TFTQVELLTSMEKSLSEIAGGASNLNTQQLMMSASGYIGKLVEFDGNNTYLSDGVAAVS- 119 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 E ++ K T TI D G VR+ +++F W+GT DG+ G Sbjct: 120 -------FEAEEVPFKTTVTIKDSEGNFVRSFSPSVSDTDMNTFYWNGTDADGNAVDEGK 172 Query: 179 YNVAISA-SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y ++ A G ++ LV GV + ++ ++V + Sbjct: 173 YTFSVVAIGTDGEKIDVHTYGNGLVTGVKTVDGELVYEV-DGSDIPAEDVTSV 224 >UniRef50_Q2RWZ4 Flagellar hook capping protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWZ4_RHORT Length = 245 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 10/230 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +T T G + + + + ++FLTLL +QLKNQDP +PM++ E T+QL Sbjct: 2 ADLTAEASTAAGAAAATKAGKSRGKLTSDMNTFLTLLTSQLKNQDPLSPMDSTEFTNQLV 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q + V N + + NSQ+ A +G V T V G Sbjct: 62 QFAQVEQQINTNDNMEKLLAVSGNSQAAMAVGYLGKYVEAESTVVALQDGQAVFT----- 116 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 L AAD VT + D+ +VR G+LT G+H TW+G + G +G+Y +A Sbjct: 117 ---YGLTAAADNVTIALYDEKDNLVRAFQ-GDLTQGLHKITWNGKDSYGEKLDDGTYRIA 172 Query: 183 ISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++A++ + V G+ G TL + L +V + Sbjct: 173 VTATSKKDGSIETWSTTIGKVTGIASDGKGGTLLGLGSTSVDLTKVLGVF 222 >UniRef50_D1B5D1 Flagellar hook capping protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B5D1_SULD5 Length = 229 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 12/202 (5%) Query: 33 SSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQA 92 FL LL+ +L++QDPT+PM+++++ +Q AQ+S++ + L +S Q+ + + A Sbjct: 32 DDFLQLLLTELEHQDPTDPMDSDKILTQTAQLSSLEASQNTTAALEELSDQLSANTNFSA 91 Query: 93 SNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDI 152 +IG + + + T+ F + T TITD NG V+TIDI Sbjct: 92 IGVIGQMASLGSSAITLE--------NKTSNFEIYFPSEIKDGTLTITDTNGKTVKTIDI 143 Query: 153 GELTAGV---HSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGN 209 G+ AG +F WDG DG+ +G+Y+ +S ++ L V+ V + Sbjct: 144 GDSVAGKSGVIAFNWDGVDNDGTQLADGTYSATVSYTDASGALKTTQAGTYPVESVRYVD 203 Query: 210 SGNTLDLGTYGTTTLDEVRQII 231 + LG+Y +DEV + Sbjct: 204 GAAYVKLGSY-YYAIDEVLEFY 224 >UniRef50_Q7NU17 Basal-body rod modification protein FlgD n=1 Tax=Chromobacterium violaceum RepID=Q7NU17_CHRVO Length = 224 Score = 124 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 112/227 (49%), Gaps = 8/227 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 S ++ + ++A LQ++FLTLL AQL QDP NPM+N++LTSQ+AQI Sbjct: 2 APGASSMQAANGGASGNTGSATSAQSLQNNFLTLLTAQLNAQDPLNPMDNSQLTSQMAQI 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S VSG++ LN T+ + + SQS+ A+ +IG+ V++ AG A TT Sbjct: 62 SQVSGLQSLNLTMQQLVASQNASQSMMATGMIGNNVLV------AGNTLASPAAGQTTQG 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 GV L A ++ DKNG VV T+ + + G+++F WDGT G P G+Y + Sbjct: 116 GVMLSGPASSYQVSVLDKNGNVVDTVTVANPSKGLNTFNWDGTDGKGHALPAGNYTFQVK 175 Query: 185 AS--NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 + + G A VQ V N L L + L V Q Sbjct: 176 VTQASAGGNTTATAYNNQKVQAVSWLNGSPMLVLPGNQSVPLSAVAQ 222 >UniRef50_A3K323 Possible FlgD protein n=1 Tax=Sagittula stellata E-37 RepID=A3K323_9RHOB Length = 188 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 12/191 (6%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L Q++NQDP NP+++ E +QLA S+V + N L +IS + + + IG Sbjct: 1 MLTVQVQNQDPLNPVDSTEYATQLATFSSVEQQVQTNELLRNISATLGGNSLNEFGRWIG 60 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 ++ + G + + AD+ + D G V+ DI Sbjct: 61 MEGLVRAPAMFDGVAPVTIRP--------DFSEDADRAVLVVRDAAGEEVQRFDI---DV 109 Query: 158 GVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQ-PLQFALVQGVIRGNSGNTLDL 216 G + W G ++G+ P G Y + + + ++ + V N L Sbjct: 110 GEDAVVWGGHDSEGNALPVGVYRFDVESYIDKRFDGSTMARVYSRIDEVRNDNGTVLLRF 169 Query: 217 GTYGTTTLDEV 227 T +E+ Sbjct: 170 ADGSEATSEEI 180 >UniRef50_Q4JMN7 Predicted flagellar hook capping protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMN7_9BACT Length = 231 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 23/239 (9%) Query: 5 VTTTDPTNTGVSTT---------SSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENN 55 ++T DPT+ + + GS QS FL L+ QL+NQDP PMEN Sbjct: 1 MSTIDPTSQSQLDSILQKLGVPKKEDTARGSKDTLGQSDFLKLMTTQLQNQDPFAPMENA 60 Query: 56 ELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 E +Q+AQ STV+GI ++ T L +I+ Q+ + A+NL+G VM+PG A Sbjct: 61 EFIAQMAQFSTVTGITEMGTELKAIAEQLGEFRIATAANLLGSSVMVPGNYARADD---- 116 Query: 116 GAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAP 175 +EL A+ T ++ G V+ +++G +G+ F W + Sbjct: 117 ---NGEIHGMIELPSASGITNLTFSNAAGDVLHQMELGPQPSGLVGFAW---TDIPQSVL 170 Query: 176 NGSYNVAISASN--GGTQLVAQPLQFALVQGVIRGNS--GNTLDLGTYGTTTLDEVRQI 230 +G + I A G P FA + G+ G LD+ YG E+++ Sbjct: 171 DGDEAIRIEAYADMGAGMESLTPSIFAEILAASTGDQTTGVMLDVRDYGEVRAAEIKKF 229 >UniRef50_A4XNR6 Flagellar hook capping protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNR6_PSEMY Length = 225 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 15/229 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 +++ + + G+ ++ S+A L+++FLTL+VAQ++NQDPT P+++ E +Q Sbjct: 3 AVSNNSQNNPVYGIDEAVKQAVNVSDATQLENNFLTLMVAQIQNQDPTKPVDSTEFLNQF 62 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 A +S V +E + + S +DN Q+L A+ L+G V + + G Sbjct: 63 AAMSQVKSLENMASLSKSNLVLLDNLQTLTAAGLVGQEVKVATEKLELGADKV------- 115 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 V L+ AA K+T +TD NG + I +G G F D GSY V Sbjct: 116 -KGEVNLEHAAGKLTLVVTDSNGVK-KEIALGSQAPGRVPFELDPKALG---LAPGSYKV 170 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + +G + V V G L++ G+ + + Sbjct: 171 EVQSDSGEYP---KVEVAGRVTQVRVSAEGPVLEIVGIGSVPFYNITEF 216 >UniRef50_B6QZA4 Flagellar hook capping protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZA4_9RHOB Length = 218 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 14/227 (6%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT + ++ SS+ NA F++LL Q++NQDP P++++E T+QL Q Sbjct: 1 MTTINALTPNAGSSGSSAQNSINAN--FDLFISLLTTQIQNQDPLEPLDSSEYTNQLVQY 58 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 + V L Q+ + Q N IG V +T + Sbjct: 59 TMVEQQVATTEKLDEQLTQLKTQSASQFVNYIGKEVTAQSSTAQLKDDKASWNLDA---- 114 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 +A K T TI + GA V +I + G ++F WDG T+G+ A +G+Y++ I Sbjct: 115 -----VSAGKATVTIKNSEGAEVYQKEIDLVE-GDNTFEWDGVATNGTKAEDGAYSIDII 168 Query: 185 ASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + G Q V V L +G + EV + Sbjct: 169 TKDANGEPFAVQTEVKGTVDAVDFSTGDIILHMGDL-KIPVGEVTGV 214 >UniRef50_A5V5R8 Flagellar hook capping protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V5R8_SPHWW Length = 226 Score = 122 bits (306), Expect = 7e-27, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 10/229 (4%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ + G +S+++ SN + Q+ FL LL Q++ QDP NP++N ++ +Q+A Sbjct: 4 STGSSYLDSLNGAKNSSTTTTKKSNESLSQNDFLKLLTTQMQTQDPFNPVDNTQMVAQMA 63 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S +GI ++N +L S+ + S+ A+N IG ++P A + Sbjct: 64 QFSQTTGIAEMNQSLKSMVQSLQQSRVADAANWIGKAALLPSKAASALAD-------GSF 116 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V L AA +V ++ D +G VV T + AG F WDG DG+ G + Sbjct: 117 AGNVTLPDAASRVDISLVDGSGTVVYTGSATNVPAGDVPFYWDGKDQDGNPVA-GPLTIV 175 Query: 183 ISASNGGTQLVA--QPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 SA + Q +A +A V V SG+T + G + Q Sbjct: 176 ASAKDSQAQAMAGITTSSWATVASVSSPASGSTKIVTPLGNFDPADALQ 224 >UniRef50_B1XWJ6 Flagellar hook capping protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWJ6_LEPCP Length = 224 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 10/231 (4%) Query: 1 MSIAVT-TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 MS VT +T+ + + S S S T S FL LLVAQ++NQDP +PM+N ++TS Sbjct: 1 MSTTVTGSTNSSASIYSQLSGSGSTASTTEASADRFLKLLVAQMQNQDPLSPMDNAQVTS 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQI+TVSGIEK+N ++ ++ GQ Q+LQ + L+G GVM+ AG G T Sbjct: 61 QMAQINTVSGIEKVNESIQAMGGQFTQMQALQGAQLVGQGVMV------AGKGLNLDPAT 114 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 G EL AD + G V+ T+D+G T+G HSFTW A Sbjct: 115 GQASAGYELAGPADAARIEVLSAAGRVIDTVDLGAETSGRHSFTWAP---AQMPADTSGI 171 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + A+NG + + L V V + LDL + +V+ Sbjct: 172 SFRVVATNGAAAVTSTALVRDQVVAVSNSSGSLKLDLASGNQINYGDVKAF 222 >UniRef50_B0UIW9 Flagellar hook capping protein n=9 Tax=Alphaproteobacteria RepID=B0UIW9_METS4 Length = 233 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 13/231 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ +++T + G T ++S + FLTLL QLKNQ+P +P++ N+ T Q Sbjct: 1 MATGISSTLTGSAGTKTNTASDSATIAGN--FNQFLTLLTTQLKNQNPLDPLDTNQFTQQ 58 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L Q ++V K N L ++ + + A+ L+G V G T GS Sbjct: 59 LVQFASVEQQLKTNDRLDTMVAASKAATASSAAGLVGKTVTADGATAALAGGSASWT--- 115 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + +AA + TITD+ G VV T G SFTWDG + G TAP+G+Y Sbjct: 116 -----LTAARAATRAVLTITDQKGNVVATRTQSLANGG-QSFTWDGRSSTGLTAPDGTYT 169 Query: 181 VAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + A++ G + + V S L + + L V+ I Sbjct: 170 LKVQATDATGQTVSVDTKVTGTIASVDVTGSEPMLSI-GGRSVPLSRVQAI 219 >UniRef50_C4TUA9 Basal-body rod modification protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TUA9_YERKR Length = 219 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 12/224 (5%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 N+ S N +L + F+TLLVAQ++NQDP NPM+ E SQ+AQ+S Sbjct: 6 ENSELNSKSGAVSPRQDVLPNGDELNNQFMTLLVAQIQNQDPLNPMDGTEFVSQMAQLSQ 65 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V E + L S + Q++ QS+ +NL+G VM+ V T + G + Sbjct: 66 VQSTENMAKMLKSNTVQMERMQSIATANLVGQQVMVESDDVELDTQIQNGR--------L 117 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 ELQ AA + +TD G R I++GE +AG F D T + G Y ++ +S Sbjct: 118 ELQHAASPLVIHLTDDLGQEHR-INLGEQSAGSIDFAIDPTKQN---LKPGHYKLSAVSS 173 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + + + + + L++ G +++Q Sbjct: 174 SAEKFIPLELVGVVNNVRIPQRGGAAQLNIAGIGDVPYHKIKQF 217 >UniRef50_B2K1Q4 Flagellar hook capping protein n=23 Tax=Yersinia RepID=B2K1Q4_YERPB Length = 218 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 16/230 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + + + + + L + F+TLLVAQ+KNQDP NP + E SQ+A Sbjct: 1 MQINESRNSANVGNQSPAPEGGLPGGEQLNNQFMTLLVAQIKNQDPLNPADGTEFVSQMA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V E + L S + Q+ Q++ +NL+G VM+ G + G G Sbjct: 61 QLSQVQATENMAKLLKSNTVQMAKMQTMATANLVGQQVMVEGHEITLGKDRVAGR----- 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + L+Q A + ITD G + ID+G+ AG +FT D + G Y ++ Sbjct: 116 ---LTLKQPAPTLLLHITDILGQE-KVIDLGKQPAGPVNFTLDPAVA---KLQPGQYQLS 168 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 + +G + + V V L++ G + ++ Q Sbjct: 169 AVSGSGEELIPLE--VAGKVNNVRISPQGGAAQLNITGLGEVSYSQITQF 216 >UniRef50_C6NWL0 Flagellar basal-body rod modification protein FlgD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWL0_9GAMM Length = 231 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 10/232 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S +T+S S+ +GS+ S+F LLV QL NQDP NP+ N +L++QL Sbjct: 8 SATNPFYASLQGSGTTSSGSASSGSSGLASASTFYNLLVTQLTNQDPLNPLSNQDLSAQL 67 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ S +G++ + ++L + QI+ +Q LQA++LIG V G + GS A Sbjct: 68 AQFSVANGVQAIQSSLTGLMSQINQNQGLQAASLIGKSVTTSGNRLQLSDGSATAA---- 123 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 +L A+ V + + G V + G AG+ SF+W+G G+ P G+Y Sbjct: 124 ----YDLASPANSVNVLVQNTAGQTVAVLPQGPQGAGLQSFSWNGQDNQGNPLPAGAYQF 179 Query: 182 AISAS-NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTY-GTTTLDEVRQII 231 ++ A+ G + + +VQ V G+SG TL L G+ + V+ I+ Sbjct: 180 SVQATGANGQPVSSTSYMSGVVQSVTLGSSGPTLHLSGVDGSVPFNAVQNIL 231 >UniRef50_C1A556 Putative flagellar basal-body rod modification protein FlgD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A556_GEMAT Length = 267 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 82/241 (34%), Gaps = 17/241 (7%) Query: 6 TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65 +P ++ L + + FL +LVAQLKNQDP NPM+ ++ +QLAQ S Sbjct: 26 PAAEPPVGPAEPSAPRDLPTNPNGMGRDEFLKMLVAQLKNQDPLNPMDGKDMAAQLAQFS 85 Query: 66 TVSGIEKLNTTLGSISGQIDNS---------QSLQASNLIGHGVMIPGTTVLAGTGSEEG 116 TV + K+N +L + + ++ + + G Sbjct: 86 TVEQLLKMNESLDAQKSATAEMKDAIVSLEETQNERADELAQLIEGQMAMATVGKTGVTP 145 Query: 117 AVTTTTPFG------VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTD 170 V+ + T+ + G V +G + G SF G Sbjct: 146 GNNAWVDKEGNGTLVVDAGSLSGTGRITMINSKGEAVGQAIVGAVKPGQASFNV-GDYEF 204 Query: 171 GSTAPNGSYNVAI-SASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQ 229 G Y A +GG A + G+ N L +G + + ++ Q Sbjct: 205 DPPLEPGQYTYKFDVAKDGGLYQSATTYTAGRITGMKYENGNPILIIGDSLSVPMSQLTQ 264 Query: 230 I 230 I Sbjct: 265 I 265 >UniRef50_A6DYV3 Flagellar scaffolding protein FlgD n=1 Tax=Roseovarius sp. TM1035 RepID=A6DYV3_9RHOB Length = 225 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 14/210 (6%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 N Q FL L+ AQL+NQDP PMEN E +Q+AQ STV+G++++NTTL I Q Sbjct: 26 RTGNGDLGQQDFLALMTAQLQNQDPFAPMENGEFLAQMAQFSTVAGLDRVNTTLSDIGSQ 85 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD-K 142 I ++ AS+L+G V++P + +L +AA VT ++ + Sbjct: 86 IGGNRIATASSLLGQQVLVP-------GSLARPDASGGVHGVADLPEAASAVTVIYSNAE 138 Query: 143 NGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALV 202 GA + D+G AG+ F WDG + A G+ VAI A+P +A V Sbjct: 139 TGAELHRKDMGAQPAGLMGFDWDGLPPE-IVAARGAVRVAIEV---DGDTPAEPFVYARV 194 Query: 203 QGVIRGNSGN--TLDLGTYGTTTLDEVRQI 230 GV G TL + YG + E+ I Sbjct: 195 VGVQMPEGGQDMTLRVEDYGLRSSLEITDI 224 >UniRef50_Q31FK9 Flagellar hook capping protein FlgD n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FK9_THICR Length = 227 Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 12/234 (5%) Query: 1 MSIAVTTTDPTNT--GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 M+ +++ T+ + +++ + Q+ FL LL QL+NQDP PM+ Sbjct: 1 MATPAISSNNTDYMKALQQSTNGKSNAPDQQLGQADFLRLLTTQLQNQDPNKPMDPTNFV 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 + L Q+S + K+N ++ +++ + N Q +Q+++LIG V G T+ G+E Sbjct: 61 TDLTQMSQLEATTKMNQSMLAMTTGLQNMQVMQSASLIGKNVQAIGDTMSHEAGTET--- 117 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 P + L Q VT ++D +G V I + +L AG WDG G+ A +G Sbjct: 118 ----PIRLSLDQPLKDVTVVVSDGSG-PVSEIFVDDLNAGEKMVNWDGKDKLGNVAGSGE 172 Query: 179 YNVAISASN-GGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQI 230 Y + + + G + + + V + + T L T +D++R+I Sbjct: 173 YTLTVFGLDKEGELQSIKTIVPSKVNSISINDDGTTTATLATGEKVKIDDIREI 226 >UniRef50_A3SKB3 Possible FlgD protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKB3_9RHOB Length = 227 Score = 120 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 85/232 (36%), Gaps = 17/232 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAA----DLQSSFLTLLVAQLKNQDPTNPMENNE 56 M + +TT S +S+ +++ +FL +L Q++NQDP NP+E + Sbjct: 1 MDVTTSTTSTGQAAQSGQASTQAESDSSSRAISADFETFLKMLTVQMRNQDPLNPVEGTD 60 Query: 57 LTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEG 116 QLA STV + N LG++ Q+ Q +G G Sbjct: 61 FAVQLATFSTVEQQVRTNDLLGALGNQLGGLGFGQLLGWVGMEARTTAPVAFDG------ 114 Query: 117 AVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN 176 + AD+ +T+ G V+ + A TW DG PN Sbjct: 115 ---APVDLVLPEIALADRAEMVVTNARGVEVQRQTV---PASGGELTWVAVDEDGDPLPN 168 Query: 177 GSYNVAISASNGGTQLVAQPLQF-ALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 G Y + + L +QP++ A + + G L L + +EV Sbjct: 169 GVYTLTVEGYASDALLGSQPVEHRADIVEARQTAQGTRLLLSSGQEIAAEEV 220 >UniRef50_A1VXC7 Flagellar hook assembly protein n=15 Tax=Campylobacter RepID=A1VXC7_CAMJJ Length = 294 Score = 120 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 6/212 (2%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 + NA + +FL LL+ +L++QDPT+PM+++++ +Q +Q+S + + NTT+ + Sbjct: 40 SNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVET 99 Query: 84 IDN-SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTAT--IT 140 + S S S I ++ + + L + +D+ T I Sbjct: 100 MQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIY 159 Query: 141 DKNGAVV--RTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQ 198 D N +V D ++ G+ + W G DG A +G Y V + +N + + Sbjct: 160 DSNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYG 219 Query: 199 FALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++GV+ + + D +++I Sbjct: 220 TYPIEGVVFKDGVAYAKMAG-QEVPFDAIQEI 250 >UniRef50_Q2CGF8 Flagellar hook assembly protein FlgD n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGF8_9RHOB Length = 222 Score = 119 bits (298), Expect = 7e-26, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 10/220 (4%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T T +T ++++ + + +FL +L AQ+ NQDP PM+++ +QLAQ+ Sbjct: 1 MALTGITPAASATQTATTGSNAAMDSNYQNFLKMLTAQVTNQDPLAPMDSSTFVTQLAQL 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S V + N L + + + S+ LIG V + GS + Sbjct: 61 SQVEQTVQSNGHLRELLAGVQSFGSMAEVQLIGKPVTYASDRISLAGGSADY-------- 112 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGV-HSFTWDGTLTDGSTAPNGSYNVAI 183 L A IT +G V+R I +T G H+ TWDG + G P+G++ I Sbjct: 113 LYSLDAEAASAKLVITGADGQVLREIGGLAVTPGERHAVTWDGRDSQGLPVPDGTFTAEI 172 Query: 184 SASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTT 222 A + G Q+ ++ + + G G+ L + Sbjct: 173 RAVDADGEQIGYSGYASSVARALEFGPDGSMLTMENGEEV 212 >UniRef50_A3VB77 Possible FlgD protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VB77_9RHOB Length = 227 Score = 119 bits (297), Expect = 8e-26, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 13/226 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + T + + S + S + +FL +L Q++NQDP NP+E+++ QLA Sbjct: 6 TSTTVSYGASAASGAASEDPKSKSAISSDFETFLKMLTVQMENQDPLNPIESSDYAVQLA 65 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 S V + N L ++ Q+ + +G + Sbjct: 66 TFSGVEQQVQTNDLLKALQTQLGVMSMSDLAGWVGMEARAGVSAQFDMEPITVIPHP--- 122 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 A + + + G++V ++ + S W G +GS P G Y+ Sbjct: 123 ------PTGATQTFMVVKNAAGSIVDRVEF---SPSDTSVQWAGLDDNGSLFPPGEYSFT 173 Query: 183 ISASNGGTQLVAQPL-QFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + + N + +P+ ++ V + L L T EV Sbjct: 174 LQSYNTRGLMSEEPMSVYSEVVEAKVVSGQTILILETGDEIPAAEV 219 >UniRef50_Q0EZL7 Flagellar hook capping protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZL7_9PROT Length = 221 Score = 119 bits (297), Expect = 8e-26, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 8/224 (3%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 T T + ++ T N + FL LLVAQ++NQ+P P + +++SQLAQ + V Sbjct: 3 TPTAATASGQAAQTTRTTQNDLGKKDIFLKLLVAQMQNQNPLKPQDPTQMSSQLAQFNMV 62 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 N L + ++ ++ + + T + F V Sbjct: 63 EQQTSSNALLQQLVDASSTQKATSSNG------ASYLGKNVTVQQDQINYTGTASNFSVV 116 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 A + T++D G VRTI++ L AG + +WDG G+ A G Y + + A++ Sbjct: 117 TDHPAAQAQITVSDSTGTPVRTINLKNLPAGGSNLSWDGITDSGAAAAQGKYTINVQATD 176 Query: 188 G-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 G + + Q V V +G T+ +G + + + +I Sbjct: 177 AQGAAVTSHIEQSGTVDAVRFSANGTTMIIGGIAS-SQANITEI 219 >UniRef50_A9BQ62 Flagellar hook capping protein n=4 Tax=cellular organisms RepID=A9BQ62_DELAS Length = 220 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 10/224 (4%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 + + ++ S++S + ++ A Q FL LLVAQL NQDP NPM+N ++TSQ+AQI+TV Sbjct: 7 SVASTADINNKSATSNSTTDPAAAQDRFLKLLVAQLNNQDPMNPMDNAQMTSQMAQINTV 66 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVE 127 +GI++LN T+ S++GQ Q LQ + +IG V+ G T+ G + + Sbjct: 67 TGIQQLNKTMESMAGQFTAMQVLQGTQMIGRTVLTEGNTLGVGK-------EKSYTAAFD 119 Query: 128 LQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASN 187 L+ A V IT +G +V T+++G TAG + FTWDG+ G + A+N Sbjct: 120 LEGPAADVKVQITTASGELVDTVELGSGTAGRNYFTWDGSKYTGD---ASQLRYTVQATN 176 Query: 188 GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 T + + L V + TL+L V+ + Sbjct: 177 ADTVVASTTLSPHAVLATGTTDGKLTLELDDGTNVAYASVKAVY 220 >UniRef50_A3W5K4 Possible FlgD protein n=2 Tax=Roseovarius RepID=A3W5K4_9RHOB Length = 230 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 77/235 (32%), Gaps = 21/235 (8%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNA--------ADLQSSFLTLLVAQLKNQDPTNPMEN 54 + VT+ + + T N+ + +FL +L QL+NQDP NP+E+ Sbjct: 1 MDVTSASQPSFEAGALQRGATTSDNSLEKATGGFSTDFETFLKMLTTQLRNQDPLNPIES 60 Query: 55 NELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSE 114 ++ QLA STV N L + +I Q S IG + +G Sbjct: 61 SDFAVQLATFSTVEQQVLTNDLLTDLGARIGAQGLSQVSGWIGMEALSELPVTFSG---- 116 Query: 115 EGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA 174 + A+ T+ G +V I + W G G Sbjct: 117 -----EPVSLLATVDPQAEAAEIVATNAQGIIVNRQPIPTTSG---QVLWAGLDPIGLPL 168 Query: 175 PNGSYNVAISASNGGTQLV-AQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVR 228 +G Y +++ + + + + L L + + D+V Sbjct: 169 AHGDYALSVHSLVNDDIIARHNARVPSRIVEAQFEAGEAVLLLESGQRISPDQVL 223 >UniRef50_A1WFE4 Flagellar hook capping protein n=8 Tax=Comamonadaceae RepID=A1WFE4_VEREI Length = 236 Score = 118 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 11/214 (5%) Query: 18 TSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTL 77 T + + ++ + Q FL LLVAQL NQDP NP++N ++TSQ+AQI+TV+GI++LN T+ Sbjct: 34 TGAKAQAVTDPSAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQIAQINTVTGIQQLNQTM 93 Query: 78 GSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTA 137 ++ Q D Q +Q + L+G VM G+ + + +G +L QAA V Sbjct: 94 QRMAAQFDALQVMQGAALVGRSVMTEGSALSMAGKTGQGG--------FDLAQAATGVKV 145 Query: 138 TITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPL 197 I G V+ ++D+G AG H F+WD + G A +G ++A+NG L A L Sbjct: 146 EIMTAGGQVLDSMDLGAQDAGRHEFSWDASHYAG--ATDGL-QFRVTAANGAGALDATAL 202 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + + V N L L ++ ++ Sbjct: 203 SLSKISAVGAENGQLVLTLANGKNIGYSQIEALL 236 >UniRef50_C7BXG3 Flagellar hook assembly protein FlgD n=5 Tax=Helicobacter RepID=C7BXG3_HELPB Length = 306 Score = 117 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 40/268 (14%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+ + T + +++F+ L + QLKNQDPT PME +++ +Q A Sbjct: 1 MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNS----------------------------------- 87 Q++ V E+ T+ ++ + ++ Sbjct: 61 QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNAL 120 Query: 88 QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 + + A N + I T V ++ + F ++ + I ++N +V Sbjct: 121 REVTALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELV 180 Query: 148 RTIDIGELT--AGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQ--LVAQPLQFALVQ 203 +TI + + + G +F WDGT G P G+Y + + + + V+ Sbjct: 181 KTIPLKDYSGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE 240 Query: 204 GVIRGNSGNTLDLGTYGTTTLDEVRQII 231 VI L +G +D + Sbjct: 241 SVIFDKGKPMLRMGEMI-LPIDSAIEFY 267 >UniRef50_A0P3G8 Flagellar hook capping protein n=2 Tax=Labrenzia RepID=A0P3G8_9RHOB Length = 219 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 12/225 (5%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 TT + S+ S S+ + + FL++L Q++NQDP +P+++ E T+QL Q S+ Sbjct: 2 TTVSPTSAASSQSGSATSQAGLIADYELFLSILTTQIQNQDPLDPLDSAEYTNQLVQYSS 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 V K N L I + ++QS+ + IG+ V +T + + Sbjct: 62 VEQAIKQNQNLEEIIASLTSNQSMGYVSYIGNEVTADASTTTLSGSKASWSYSLEED--- 118 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 I + G++V + +I L AG +F W G G A +G Y ++ Sbjct: 119 ------ATGEFEIRNSAGSIVYSGEIE-LAAGDGTFYWGGQTDSGQQAVDGLYTISFDMK 171 Query: 187 NGGT-QLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + + +V V + L +G+ + V + Sbjct: 172 DASSRPETVKTTVSGVVDSVDWSSGEAVLKVGS-QEFPVSSVVSV 215 >UniRef50_B6JMC9 Flagellar hook assembly protein n=13 Tax=Helicobacter RepID=B6JMC9_HELP2 Length = 339 Score = 116 bits (290), Expect = 6e-25, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 96/268 (35%), Gaps = 40/268 (14%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 +A+ + T + +++F+ L + QLKNQDPT PME +++ +Q A Sbjct: 1 MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNS----------------------------------- 87 Q++ V E+ T+ ++ + ++ Sbjct: 61 QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLEANNAL 120 Query: 88 QSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVV 147 + + A N + I T V ++ + F ++ + I ++N +V Sbjct: 121 REVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELV 180 Query: 148 RTIDIGELT--AGVHSFTWDGTLTDGSTAPNGSYNVAISASNG--GTQLVAQPLQFALVQ 203 +TI + + G +F WDGT G P GSY + + Q + + V+ Sbjct: 181 KTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGSYKIKAEYNLDSHSKQYLQTRIGRGEVE 240 Query: 204 GVIRGNSGNTLDLGTYGTTTLDEVRQII 231 VI L +G +D + Sbjct: 241 SVIFDKGKPMLRMGEMI-LPIDSAIEFY 267 >UniRef50_Q2RRB2 Flagellar hook capping protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RRB2_RHORT Length = 229 Score = 116 bits (290), Expect = 6e-25, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 10/214 (4%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 TS+S+ + S + FLT+L QLKNQ+P NP + NE+T QL S V N Sbjct: 14 GKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQLISYSQVEQQILGN 73 Query: 75 TTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADK 134 L ++ +N + A +G V+ + + + ++A Sbjct: 74 QYLENLVLSTNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKM--------TVPESAKS 125 Query: 135 VTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS-NGGTQLV 193 V+ +T+ G V+ + + G ++FTWDG T GS A +GSY + A+ Sbjct: 126 VSFVVTNAKGDVIYSKTETPES-GAYTFTWDGATTAGSKAVDGSYTLTAKATLADDKTKT 184 Query: 194 AQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 + V V + L L +L + Sbjct: 185 IDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNI 218 >UniRef50_Q2WA16 Flagellar hook capping protein n=2 Tax=Magnetospirillum RepID=Q2WA16_MAGSA Length = 274 Score = 116 bits (289), Expect = 7e-25, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 11/219 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 V T+ S + S+ + ++FLT+L QLK+QDP +PM++ + T+QL Sbjct: 2 TTVDTSATNAATASAATGSAAGKATLGSNFNTFLTMLTTQLKHQDPLSPMDSTQFTNQLV 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S+V N+ L + +Q+ Q + +G V + GT + + Sbjct: 62 QFSSVEQQINANSNLEKLIKLQQTAQTSQGISYLGQTVEVSGTDLPLQDSAAS------- 114 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 L + A V I D G V +I GE +G HS +W+G + G+ +G Y+ Sbjct: 115 -LTYTLPKEARDVKIVIKDSTGKQVNSI-AGETASGAHSLSWNGKDSSGTQLDDGRYSFQ 172 Query: 183 ISAS-NGGTQLVAQPLQFALVQGVIRG-NSGNTLDLGTY 219 + A+ GT + F V V +G TL +G Sbjct: 173 VVATAADGTSITTTSTSFGRVTKVTNDATNGTTLVMGAG 211 >UniRef50_B0SWE2 Flagellar hook capping protein n=3 Tax=Caulobacter RepID=B0SWE2_CAUSK Length = 232 Score = 115 bits (288), Expect = 1e-24, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 13/224 (5%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 T T + T + + ++ A + +FL LL QLKNQDP +P + +++TSQ+ Q++ V Sbjct: 4 TATSNTVTDKINNSRTSLASNEQTFLKLLTTQLKNQDPLSPTDTSQMTSQITQMTGVEQQ 63 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 N L ++ G + NL+G V + G + + Sbjct: 64 LVTNELLTALVGMSTGGGISEGVNLMGKQVTAETAKSVLKNGEATWS--------YTQSR 115 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-GSYNVAISASNGG 189 +A V + DK V+ T+ ++ G H+F WDG DG P+ G Y + ++A++ Sbjct: 116 SATGVKIEVLDKYDKVITTVLPDDMAGGDHTFKWDGKSKDGVKQPDGGEYTIKVTATDAE 175 Query: 190 TQLVAQPL---QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + +V V + N + +G LD V + Sbjct: 176 GTKITTTAKGRIEGVVTKVTNESGVNMVWIGD-TKVPLDSVIGV 218 >UniRef50_Q2C8I4 Flagellar basal body rod modification protein n=3 Tax=Vibrionaceae RepID=Q2C8I4_9GAMM Length = 226 Score = 115 bits (288), Expect = 1e-24, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 15/231 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + T + + + + ++A L++ F+ L+VAQ++NQDP NP++ E QL Sbjct: 7 NALSTDVPAIESTNMSVAGNPNNANDANSLKNEFINLMVAQIQNQDPLNPLDGTEYVGQL 66 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ S V E + + + +DN Q L + L+G V + E A Sbjct: 67 AQFSQVESTENMAKLMQNSMVLLDNMQVLSTAGLVGQTVYV-------EGSEIELADDKQ 119 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 +EL A++ V+ +TD+ G + + +G G FT D D G Y + Sbjct: 120 QKGRIELNHASNTVSIVLTDQLGNQ-KIMPLGPKNKGDVEFTIDPNALD---LAKGKYQI 175 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 +I L V V ++G +++ G ++ Q Sbjct: 176 SIEVEKD--LPQPSVLLAGEVSQVRVPSNGGAALVNVEGIGQVPFYQISQF 224 >UniRef50_C4SBL2 Flagellar hook capping protein n=4 Tax=Enterobacteriaceae RepID=C4SBL2_YERMO Length = 237 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 12/237 (5%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + + N+ + + GSN DL +SF+TLLVAQ++NQDPTNPM+NN+LTSQLAQ Sbjct: 1 MAVSPVMNSNNAAPKDGASNGSNPEDLTNSFMTLLVAQMQNQDPTNPMDNNQLTSQLAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI-------PGTTVLAGTGSEEGA 117 ST SG+++LN+T+ ++ + + Q + A++ +G V I GT G EGA Sbjct: 61 STASGVQQLNSTVMAVGSLVTSMQQMNAADWVGRQVWIEGDSSVVNGTKESENVGEGEGA 120 Query: 118 VTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNG 177 FG L ADKVT T+TD+ G T ++ + AGV+ T D + G Sbjct: 121 EQGNQEFGFALDSDADKVTVTLTDELGNA-YTAELKNVKAGVNKLTLDDLSNFQPSELPG 179 Query: 178 S---YNVAIS-ASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y V+ S A++ G L+ A V GV +G L LG GT +L ++ I Sbjct: 180 KGAAYKVSFSAANDDGNTPKITSLKKAKVDGVSFSPTGAVLQLGLNGTASLGDIYFI 236 >UniRef50_A6F9Q1 LfgD n=1 Tax=Moritella sp. PE36 RepID=A6F9Q1_9GAMM Length = 218 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 16/223 (7%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 + + +S +T ++A L++ FL ++VAQ+KNQDP +P++ E SQLAQ S V G Sbjct: 5 NNSNRTNPAQTSEVTANSALGLKNEFLQMMVAQIKNQDPLDPLDGTEYVSQLAQFSMVEG 64 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 +E L S + + Q LQ++ LIG V++P T + A G + + L Sbjct: 65 VEGLRAGQSSQAEMLYTQQVLQSTALIGTTVLVPSTGIAAKQGEKPSG-------VIRLD 117 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 AAD+VT T+ D NG V+ T +G +F GSY + G Sbjct: 118 GAADEVTLTVKDLNGKVINTQTWKYPESGDIAFEV-------PELDEGSYVFDVEVKMGE 170 Query: 190 TQLVAQPLQFALVQGVIRGNSG--NTLDLGTYGTTTLDEVRQI 230 L PL V+ V +G L + G+ +L + + Sbjct: 171 RVLNGAPLLSREVEKVTLPKTGSDIQLSIAGMGSVSLFSISEF 213 >UniRef50_A8FPA7 Flagellar hook capping protein n=8 Tax=Shewanella RepID=A8FPA7_SHESH Length = 221 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 116/231 (50%), Gaps = 14/231 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + V +T ++ +T+ + G++AA +++ F+TL++AQ++NQDPTNP+++ E +QLA Sbjct: 1 MNVNSTTNSSGNDNTSDVMNSPGNDAASIKNEFMTLMIAQIQNQDPTNPIDSTEYVTQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q S V +E++ + ++N +Q++ LIG M+P + V T + Sbjct: 61 QFSQVESLEQMRLNQSTQMVMMENLGIVQSAQLIGKDAMVPASEVTLDTETV-------- 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 V A ++++ I D++G VV T+ +G G F+ D + P G Y++ Sbjct: 113 HGKVYTGNAVEELSIDIMDESGEVVSTLKLGPQEVGDIEFSIDP---EALGLPPGKYSIE 169 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLG---TYGTTTLDEVRQI 230 A++G L A A ++ + ++ + GT ++ ++ ++ Sbjct: 170 AQATSGEETLTADTFIQAPIEKIHFVSASGMMMAELGYGLGTVSVLDISEV 220 >UniRef50_C6BZU8 Flagellar hook capping protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZU8_DESAD Length = 226 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 9/232 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MSI + + TG ++TSS++ N++ Q FLTLL QL+ QDPTNP +N + +Q Sbjct: 1 MSIDAASYYSSFTGSNSTSSTTTGSDNSSLDQVDFLTLLTTQLQYQDPTNPTDNTAMINQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 + + + N L +I Q+D SL + LIG VM PG + G G Sbjct: 61 MTNYAMLDEDVAQNENLEAIINQLDALASLSTAGLIGEEVMAPGGSFSVEGGEATGV--- 117 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 ++LQ A +V I D G +V TI L G T + + + +G Y Sbjct: 118 ----TIDLQDDASEVGINIYDSEGELVDTIYFDNLEEGEIEITGAQIMAEANLENDGEYT 173 Query: 181 VAISASN-GGTQLVAQPLQFALVQGV-IRGNSGNTLDLGTYGTTTLDEVRQI 230 + A++ G + A + + ++ TL L ++ +V I Sbjct: 174 ALVFATDSDGASVEAYIKSTGTISSIGRDDSNNITLTLDDGREVSIGDVSFI 225 >UniRef50_C6XM56 Flagellar hook capping protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM56_HIRBI Length = 222 Score = 113 bits (282), Expect = 5e-24, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 12/223 (5%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 N +TS+S+ + S A +FLTLL AQL+NQDP P ++ E T+QL Q S V Sbjct: 8 VNQSSGSTSNSAQSQSALASDFDTFLTLLTAQLQNQDPLEPTDSTEFTNQLVQFSGVEQQ 67 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 + N L + +++ S+ +G V I L Sbjct: 68 IQTNDALEQLIASNNSATGAAMSSYLGQSVEINSQGAGYSGEDLSWR--------YALAS 119 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA-PNGSYNVAISASNGG 189 A + T I DKNG V + E +AG H F WDGTL+DG+ A + Y +++A + Sbjct: 120 DATEATFNIQDKNG-KVLYSEPAEKSAGSHEFVWDGTLSDGTIANEDEVYYASVTAKDSE 178 Query: 190 -TQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + V GV + G + ++ +++ Sbjct: 179 ANSITTSTNVLTTVSGVDLSYDSPAITTK-AGIFSYSDILRVM 220 >UniRef50_Q2BQT9 Basal-body rod modification protein FlgD n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQT9_9GAMM Length = 235 Score = 113 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 9/233 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + D NT T S+ S + S + + F+ L++AQL+NQDPT+P + N+ Q+ Sbjct: 6 GVNQNIFDKINTQNQTKSTQSSSTSQSQEDSDMFMRLMIAQLQNQDPTSPADTNDFMQQI 65 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQ-SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 A +S V I L T+ S S + SQ +LQAS+++G V I T V Sbjct: 66 ATMSQVESINNLTQTVQSTSQSMLASQAALQASSMVGQSVYIA-----GDTAEVGTVVNP 120 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGT-LTDGSTA-PNGS 178 L +A +V + + +G++V T+ +G ++ G H F W DG+ P G Sbjct: 121 YAKGSFNLDSSASEVRIKVYNSSGSLVDTMQLGAVSQGEHEFAWQMKFDEDGNPEQPAGD 180 Query: 179 YNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLG-TYGTTTLDEVRQI 230 Y + + G V V G +G + + T GT + EV+QI Sbjct: 181 YTFVVERMDDGEYNAIDTNMAYRVNSVTLGENGIGMQVNTTAGTYDVSEVKQI 233 >UniRef50_UPI0001826559 flagellar basal body rod modification protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826559 Length = 234 Score = 113 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 11/230 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+ +T ++T +T S + ++AA + + F+ LLVAQ++NQDP NP + E Q Sbjct: 1 MSVNGVSTQASDTATTTDSGIAPNDNSAAGMTNLFMKLLVAQIQNQDPLNPTDGTEYVGQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ++ V +E + + +I +DN Q+L NL+G VM+ T+ T Sbjct: 61 LAQLTQVQSMENMTVGMQNIGVLMDNLQTLSTGNLVGQKVMVQTDTLQTDGS-------T 113 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + + L+ AA+ VT + D++G + +++G+ AG +FT D G Y Sbjct: 114 SVDGRLTLEHAANTVTVILKDESGKETK-VELGKQEAGEVNFTVDPKALG---LKEGKYT 169 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + + ++ + + S L++ G ++ Q Sbjct: 170 MTVVTDTDEQKVPIEVSGVVNNVRIPVDGSAIVLNIPGIGDVPYHQITQF 219 >UniRef50_C4UZG9 Basal-body rod modification protein n=2 Tax=Enterobacteriaceae RepID=C4UZG9_YERRO Length = 218 Score = 113 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 16/230 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + + + + L + F+TLLVAQ++NQDP NP + E SQ+A Sbjct: 1 MNINENKSLSGNSGNSLLPAGDTITGDQLNNQFMTLLVAQIQNQDPLNPTDGTEFVSQMA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V E + L S + Q++ Q++ +NL+G VM+ T+ Sbjct: 61 QLSQVQSTENMAKLLKSNTVQMEKMQAMATANLVGQNVMVESGTIELD--------NKKQ 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 + LQQAA V +TD G I++GE +AG +FT G Y ++ Sbjct: 113 SGRLTLQQAASDVVVYLTDTAGRE-HPINLGEQSAGSVNFT---LDPSQHKLKPGKYQLS 168 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 +S+G + + V V L++ G +++Q Sbjct: 169 AVSSSGEDLIPVE--LAGAVNSVRIPSQGGAAQLNVAGIGEVPYRKIKQF 216 >UniRef50_A3V266 Flagellar scaffolding protein FlgD n=3 Tax=Rhodobacterales RepID=A3V266_9RHOB Length = 233 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 17/221 (7%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 +T+ Q+ FL L+ AQL+NQDP PM+N + +Q+AQ S+V+GI K++ T Sbjct: 21 STTQDKNAVPKEELGQTDFLKLMTAQLQNQDPFAPMDNGDFIAQMAQFSSVAGISKMSET 80 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVT 136 + I+ Q+ + + N +GH VMIPG A +EL++A+ Sbjct: 81 MSGIADQMGQFRVASSVNYLGHSVMIPGNLARADD-------NGEIHGAIELERASVDTR 133 Query: 137 ATITDKN-GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA----ISASNGGTQ 191 D G + T+D+G +G+ F W +GS V ++ +G Sbjct: 134 IEFLDAMTGESLHTMDMGGQASGLSGFAW---TDVPEQYRDGSRRVRLDVLVNYGDGEGV 190 Query: 192 LVAQPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQI 230 P +A V G N L+ YG + EV + Sbjct: 191 QSLTPNVYAQVIGTANAATNGDGMLETEDYGDVSAAEVLRF 231 >UniRef50_A3V1Q8 Possible FlgD protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1Q8_9RHOB Length = 183 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 72/192 (37%), Gaps = 16/192 (8%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L AQ+KNQDP NP+E+ + +QLA S V N L +S QI S ++ +G Sbjct: 1 MLTAQMKNQDPLNPVESADFATQLATFSGVEQAVLTNDLLRGLSLQIGVSGL---ASWVG 57 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 V P G AA + D +GAVV A Sbjct: 58 KEVRAPAPVYFDG---------APVTLHPNPMAAATAGEIVVRDASGAVVHRF---ASPA 105 Query: 158 GVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA-LVQGVIRGNSGNTLDL 216 WDG +G P+G Y+ A ++ + G L P++ V V +L Sbjct: 106 TTDPVQWDGVGRNGVVVPDGVYSFAFASLSDGEVLGENPVETYNTVTEVQSFAGQTSLVA 165 Query: 217 GTYGTTTLDEVR 228 + +V Sbjct: 166 HGGIMIRVGDVT 177 >UniRef50_A7JZA8 Flagellar basal-body rod modification protein FlgD n=5 Tax=Vibrio RepID=A7JZA8_VIBSE Length = 227 Score = 111 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 17/232 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 +S + + S ++ ++ F++L+VAQ++NQDP NP++ E Q Sbjct: 9 LSSDAPVSTKAKENNGIAPNPKDMNSASSL-ENEFISLMVAQIQNQDPLNPLDGTEYVGQ 67 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V E ++ T+ +DN Q L + L+G V + G G Sbjct: 68 LAQFSQVQSTENMSRTMQQSMILLDNMQVLSTAGLVGQTVYVNSKEFELGEGV------- 120 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +EL ++++VT + D+ G + +G G F+ + G Y+ Sbjct: 121 -QNGKIELAHSSNQVTLVVKDEFGQSTKVP-LGAHGKGDVDFSINPEELG---LKPGKYS 175 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRGN--SGNTLDLGTYGTTTLDEVRQI 230 VA+ Q L V+ V N +++ G ++ Q Sbjct: 176 VAVEVQ--EGQASPNVLMAGTVEQVRIPNTGGAALVNVHGVGNVPFYQITQF 225 >UniRef50_C7I103 Flagellar hook capping protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I103_THIIN Length = 232 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 75/233 (32%), Positives = 120/233 (51%), Gaps = 10/233 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S + + S TS S+ +G + + ++F TLLV QL NQDP NPM N +L++QL Sbjct: 7 SSNSFLSSLQTSSSSGTSGSAASGLSGLNNVNTFYTLLVTQLTNQDPMNPMSNTDLSAQL 66 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ ST SGI+ + ++ +++ Q+ +Q LQA+NL+G V+ ++ + Sbjct: 67 AQFSTASGIQSMQQSMATLTAQLAQTQGLQAANLVGQTVVFDNNSISLPSSGGTAG---- 122 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 G L AA V + + +G V T+ +G L GV +F WDG+ + G AP G+Y Sbjct: 123 ---GFTLASAAQNVQVQVLNSSGQTVDTLQLGALPTGVQTFNWDGSTSGGQQAPAGNYTF 179 Query: 182 AISASNG-GTQLVAQPLQFALVQGVIR-GNSGNTLDLGT-YGTTTLDEVRQII 231 +SA++G G + A P VQ V G++G L + T L + ++ Sbjct: 180 NVSATDGTGQPVAAVPFGTGKVQSVYLNGSNGPALQMEGQSSTVPLSSIVGVM 232 >UniRef50_D0I441 Flagellar basal-body rod modification protein FlgD n=2 Tax=Vibrionaceae RepID=D0I441_VIBHO Length = 223 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 13/232 (5%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+A ++ + + S + + + + FLT++VAQ++NQ+P NP + + +Q Sbjct: 1 MSLAQVRSESLYSHQAVASETQVGANGMNPSSNDFLTMMVAQVQNQNPLNPTDGTQYLTQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L +S V +E + L +++ + N + LQA+NL+G V++ L Sbjct: 61 LGMMSAVESLESVKVGLNNLNIGMTNVEMLQATNLVGKKVLMDVNNGL------TLQENQ 114 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 T V+ +A D + D+ G VV I +G AG+ F G + Sbjct: 115 TVDARVQFDEAVDNAKVVVYDEKGKVVEEIKLGARPAGMVEFQL-----SAQELGTGEFY 169 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIR--GNSGNTLDLGTYGTTTLDEVRQI 230 + + G + + A V+ V L+L G ++ ++R+I Sbjct: 170 FDVVSERGDSADTHSMMIAADVESVNIPSDGGVIMLNLKGIGKMSMYDMREI 221 >UniRef50_A1T0J4 Flagellar basal-body rod modification protein FlgD n=12 Tax=Gammaproteobacteria RepID=A1T0J4_PSYIN Length = 230 Score = 110 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 16/236 (6%) Query: 1 MSIAVTTTDPTNTG----VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNE 56 M+++ ++ + S T + ++++ L++ F+TL+VAQ++NQDP NP + E Sbjct: 1 MALSESSVLGADVAITQMASQTKTIDANPNDSSSLKNEFITLMVAQIQNQDPLNPGDGTE 60 Query: 57 LTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEG 116 SQLAQ S V E + + + S +DN Q L ++L+G VMI +G Sbjct: 61 YVSQLAQFSQVESAENMVSLMQRNSVMMDNLQVLATASLVGQEVMIRSDKFS-----VDG 115 Query: 117 AVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN 176 V L + +V I D+ G ++ + +G AG F + Sbjct: 116 EPAQNLSGQVVLTSPSSQVNLLINDQFG-QIKKVVLGPQAAGQVDFK---LDVEALNLAK 171 Query: 177 GSYNVAISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 G+++V++ SN G + Q L ++ + + + L G+ ++ Q Sbjct: 172 GAHSVSVELSN-GQEYQPQILLSGKIESINIPATGGASMISLRGLGSVPFYDISQF 226 >UniRef50_A2SKD5 Flagellar hook capping protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SKD5_METPP Length = 217 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 82/229 (35%), Positives = 115/229 (50%), Gaps = 17/229 (7%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T ++ + + T + D FL LLV Q+KNQDP NPM+N ++TSQ+AQI Sbjct: 2 ATAPVTNSSSSVYDALNGSTTTKTDDGSERFLKLLVTQMKNQDPMNPMDNAQVTSQIAQI 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 +TV+GI LN T+ S+S Q+ +SQ LQ + L+GH V++ G+ + G Sbjct: 62 NTVTGISTLNQTVKSLSSQMLSSQVLQGAGLVGHTVLMAGSKLHFGEDGTTAG------- 114 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTW---DGTLTDGSTAPNGSYNV 181 G EL AAD V I +G VV TI++G +AG F W GT TDG Sbjct: 115 GFELANAADSVKVEILSPSGRVVDTINMGAASAGRSGFEWTAPTGTSTDGM-------TF 167 Query: 182 AISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++A G T L A PL LV+ V L+L G+ +V+ I Sbjct: 168 RVTAKAGSTTLTATPLTTDLVKAVSTSGDTLNLELLFGGSIPYTQVKAI 216 >UniRef50_A0LDL3 Flagellar hook capping protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL3_MAGSM Length = 224 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 14/232 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS + + + +S + QS FL +L AQL++QDP PMEN E TSQ Sbjct: 1 MSTTGIVNNVPVYDPNASKYTSTSTDAKEL-QSDFLRMLTAQLEHQDPLEPMENTEFTSQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQI--DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 LA +S + L + + Q QA IG V++ G T+ G + Sbjct: 60 LATFEGLSQQQNSTQLLQQLVELMSGGTDQVGQAVAYIGREVLVEGNTLTIGESGKANIN 119 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 A V + + G ++++ + + G+ S + G G+ Sbjct: 120 FE--------LSDAANVEVVMYNAAGEELKSVSLSYDSGGIKSLDLN-NAQYGDATAAGN 170 Query: 179 YNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 Y + + G++ AQ L LV GV+ +G LD+ L +VR+I Sbjct: 171 YKFRVVVRD-GSETTAQTLATGLVAGVVNDTNGVKLDVNGTQ-VDLADVRRI 220 >UniRef50_Q0C5K2 Putative basal-body rod modification protein FlgD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5K2_HYPNA Length = 216 Score = 108 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 13/200 (6%) Query: 32 QSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQ 91 +SF+ LL AQ++NQDP +PM++ + QLA S++ + NT L SI+ I + L Sbjct: 27 YNSFIKLLTAQVRNQDPMSPMDSTQFVEQLATFSSLEQLVNSNTALSSIASMIGDLNGLM 86 Query: 92 ASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTID 151 AS +G V + + + E + A K T T+ D G V T Sbjct: 87 ASQWLGEDVTFASSFMPYTGSEATFS--------YEAPEGATKSTLTVKDSEGNAVWTET 138 Query: 152 IGELTAGVHSFTWDG-TLTDGSTAPNGSYNVAISASNGGT-QLVAQPLQFALVQGVIRGN 209 + A F+WDG G+ + Y I + + A P V ++ Sbjct: 139 L---DADETVFSWDGQLTNGGTATKDEMYEFVIDYYEDNSFKGTAVPNVITKVTDIVSDG 195 Query: 210 SGNTLDLGTYGTTTLDEVRQ 229 L + T L + R+ Sbjct: 196 GTLRLGTASGLTVDLAQARR 215 >UniRef50_B1K3C8 Flagellar hook capping protein n=2 Tax=Burkholderia cepacia complex RepID=B1K3C8_BURCC Length = 241 Score = 107 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 16/230 (6%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + + TGV + ++ G+ D+ + F LLVAQ+KNQDP PME N+ +Q A Sbjct: 1 MDIQNNVNNVTGVGGSVATPTAGNGEGDVSAMFTRLLVAQVKNQDPLAPMEANQFVTQFA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 Q+S V + L + + ++ + + +G V + V G Sbjct: 61 QMSQVEAMRTLANLSAATARTQESMLVVTLGSQVGSQVRVRSEKVELGDAVV-------- 112 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVA 182 +L+ +A +V +TD+ G R + +G AG F D P G+Y + Sbjct: 113 KGSFKLESSASEVGMILTDRGGTEYR-VSLGAKQAGDVDFNIDPAE---HGLPPGNYKLR 168 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSG-NTLDLGTYGTTTLDEVRQII 231 + A +G +Q V G G L + + G ++ + + Sbjct: 169 VVADSGEKP---PVELNGDLQSVRLGTDGRVILTIASIGDAEAADITRFL 215 >UniRef50_Q2CDG3 Possible FlgD protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CDG3_9RHOB Length = 183 Score = 106 bits (263), Expect = 7e-22, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 68/195 (34%), Gaps = 21/195 (10%) Query: 38 LLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIG 97 +L QLKNQDP NP+E+ + QLA S V N L S+S Q+ + Q ++ +G Sbjct: 1 MLTVQLKNQDPLNPVESADYAVQLATFSQVEQQVLTNDLLTSLSEQLGAAGLGQVADWVG 60 Query: 98 HGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA 157 + G T V+ + AD + D+NG + + A Sbjct: 61 REARVAAAVSYVG---------TAIDVVVKPAEGADLAYIVLRDENGIELERQ---PVEA 108 Query: 158 GVHSFTWD---GTLTDGSTAPNGSYNVAISASNGGTQL-VAQPLQFALVQGVIRGNSGNT 213 W G G + I + G L +A V+ V + Sbjct: 109 EEQILGWHPAPGNDVSGRRL-----SFEIESFAAGESLGTVPAEVYASVREVRMRDGTAH 163 Query: 214 LDLGTYGTTTLDEVR 228 + L + EV Sbjct: 164 VVLSGGASAPASEVT 178 >UniRef50_A6CQ95 Flagellar basal body rod modification protein D n=3 Tax=Bacillus RepID=A6CQ95_9BACI Length = 211 Score = 106 bits (263), Expect = 8e-22, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 20/228 (8%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 ++ T +N +S+ G + F+ +L+ QL+NQDP NPM++ + +Q+A Sbjct: 1 MSNTINSNLLLSSLQQKQREGGKDVLGKDDFMKILMTQLQNQDPLNPMQDKDFIAQMATF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 ST+ I L+ ++ + + + + +G + S EG Sbjct: 61 STLEQITNLSKSMETFIEAQGQNNLIAYNQFVGKEITW-----HKLEESSEGRTEIKEGK 115 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV--A 182 G+ +NG ++ ++ ++ HS+ G++ N S + Sbjct: 116 GIVSSVRFQDNEVQFIMENGTILAPGNVSQVNHSDHSY-------GGNSLVNASSLIGRT 168 Query: 183 ISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 + N G +L + V V + + L D + +I Sbjct: 169 VYWKNEGEEL------HSAVTSVSKKDGSLWFHLENGDKIKEDSIMKI 210 >UniRef50_A3VS68 Possible FlgD protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS68_9PROT Length = 202 Score = 105 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 21/211 (9%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 PT+ + ++++ + A +FL LL AQ+KNQDP P+++ + QLA S+ Sbjct: 2 EISPTSAQSAASAANQKATQSLATDLDAFLNLLTAQMKNQDPFAPIDSTQFVEQLATFSS 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + + N L ++ G + ++ Q +++IG + T+ + Sbjct: 62 LEQQVQTNKYLETMMGLLQSTLGGQQTDVIGAQIGASEITISGAFDPLPIVSGSD----- 116 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISAS 186 + + + G VV ++W+G +G+ A G+Y+ I Sbjct: 117 ------AEGALVVRNAQGDVVFRG------PRADEWSWNGQTNEGTLAAPGTYSFEIET- 163 Query: 187 NGGTQLVAQPLQFALVQGVIRGNSGNTLDLG 217 V V VI +G + +G Sbjct: 164 ---DSTVLDARALGTVDRVITDTNGQVVGIG 191 >UniRef50_A5L6P4 Flagellar basal body rod modification protein D n=2 Tax=Vibrionales RepID=A5L6P4_9GAMM Length = 222 Score = 104 bits (258), Expect = 3e-21, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 15/232 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ N ++T + ++A+ L++ F+TL+VAQ++NQDP NP + E +Q Sbjct: 1 MTTISGAAQVNNIESASTMTPQDNPNSASALKNEFITLMVAQIENQDPLNPTDGTEYVAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S V E L + S +DN Q L + LI V + + A + Sbjct: 61 LAQFSQVESTENLVQLTQNNSTMLDNLQVLSTAALIDKTVTVKSERLSAAGVDQHTG--- 117 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 +ELQ ++ V + D G V+++++G +AG +T D + +G Y Sbjct: 118 ----YIELQAPSNTVMLELVDSLG-NVKSLNLGPNSAGRVDYTLDAQ----AMGLSGQYQ 168 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQI 230 + I + G Q V+ V + L + G +V Sbjct: 169 MRIK-LDSGQDYQPSIYQHGQVEHVTTPLIGGTSHLQVKGVGMVAFYDVAAF 219 >UniRef50_C0QPA6 Flagellar hook capping protein FlgD n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA6_PERMH Length = 215 Score = 103 bits (257), Expect = 4e-21, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 15/210 (7%) Query: 22 SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 N+ FL +L+A L+ QDP + + ++ + + T+ + Sbjct: 18 EAGYDNSKMENEDFLKVLLADLQWQDPLQANDITDFIQNTVKLREMEVLNSFQETVELLK 77 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 + + L AS LIG V+ G G + L AD VT T+ D Sbjct: 78 ETNEANSLLYASGLIGKKVVYEGNQTFVENGRSSVS--------FRLDDNADIVTVTVMD 129 Query: 142 KNGAVVRTIDIGELTAG-VHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFA 200 K G VV T L G + F D +G Y V I A+ G+ + + Sbjct: 130 KQGNVVETESFSNLQGGVDYPFEID-----NPNLTDGYYTVYIEATKDGSPVKSSVKSLG 184 Query: 201 LVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 LV+ V+R + G + L L+ + QI Sbjct: 185 LVESVVRESDGIKV-LFDDINVDLNSIVQI 213 >UniRef50_B6IT44 Basal-body rod modification protein FlgD, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IT44_RHOCS Length = 309 Score = 103 bits (257), Expect = 4e-21, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 15/221 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQS--SFLTLLVAQLKNQDPTNPMENNELT 58 MS++ ++ N + T ++ + A Q+ +FL LL AQLKNQDP P E +E T Sbjct: 1 MSVSGVSSSSNNNNNTLTGTTGGSSPMATLSQNYETFLQLLTAQLKNQDPLQPQETSEFT 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 +QL Q S V N+ L +++G + Q+ A IG V + + + G + Sbjct: 61 NQLVQFSQVEQQISTNSKLDNLTGVVQQGQATVALQYIGKTVELEPSGIPLLPGGTTVS- 119 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGS 178 ++ T I+DK+G +V T + +F WDG G G Sbjct: 120 -------YDIDGEVRSATLVISDKDGNIVNTQSVQVRPGRNTAF-WDGNDATGKAMTPGF 171 Query: 179 YNVAISASNGGTQLVAQPLQF----ALVQGVIRGNSGNTLD 215 Y +I S G V ++ VI + Sbjct: 172 YTASIQFSGGNDSQVVLTNRYVPYSGEAVSVIYDTGKTVTN 212 Score = 56.1 bits (133), Expect = 9e-07, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 3/106 (2%) Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 + + + + G + + + G TWDG G +G Y++ + + Sbjct: 204 YDTGKTVTNAKMVVRNMEGETIYEQAVSGAS-GAQRVTWDGKDKKGKAVASGYYDINVES 262 Query: 186 SNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 + G + + GV + + +G+ + VR I Sbjct: 263 TEAG-PGTIRTSVMNRISGVDMSSGETNVLIGSL-PVPMSNVRAIY 306 >UniRef50_Q7M8B1 FLAGELLAR BIOSYNTHESIS PROTEIN n=1 Tax=Wolinella succinogenes RepID=Q7M8B1_WOLSU Length = 270 Score = 103 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 39/248 (15%) Query: 23 LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI-- 80 +N + +F+ L + QLK+QDPT+PME ++ Q A ++ + E++ TL S+ Sbjct: 20 AQNNNGTLDKDAFMRLFLEQLKSQDPTSPMETEKILEQTAMLTQLEQQEEMKKTLSSMTD 79 Query: 81 ---------------------------------SGQIDNSQSLQASNLIGHGVMIPGTTV 107 + L N +G + T V Sbjct: 80 TMKTMTDTSTKLAELQETMSNTLKDLGTSLDNSTSVTTFLAQLAGYNSVGMIGKVAETNV 139 Query: 108 LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELT--AGVHSFTWD 165 + AV F + + I ++ +++ +D+ G +F WD Sbjct: 140 TGLNITSNDAVKFDLYFDEPIDASKGTPMLKIYNEKNELIKEVDLSAYNGQKGYVTFEWD 199 Query: 166 GTLTDGSTAPNGSYNVAISAS--NGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTT 223 + GS NG+YNV + + + + VQ ++ NS + LG Sbjct: 200 TKDSGGSYVANGAYNVTAEYNLDSATNKYKETRIGRGEVQSILYENSVPYVKLGDNLILP 259 Query: 224 LDEVRQII 231 + V Q Sbjct: 260 IGNVTQFY 267 >UniRef50_Q1NGN4 Flagellar scaffolding protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGN4_9SPHN Length = 219 Score = 103 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 14/232 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ T TD V +++ TGS A Q+SFL LL AQ++ QDP P++N E+ SQ Sbjct: 1 MTSVSTVTDSAGLSVYNPNATVGTGS-ATMDQASFLKLLTAQMQYQDPFEPVDNAEMVSQ 59 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +A I+ SGI ++N L SI ++ ++ A++ IG +++ + Sbjct: 60 MATITNSSGIAEMNANLASIKQELTGTRLGDAASWIGKSMLVQSNVAVPDAS-------G 112 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 V A + T + D +G VV+TID+G AG +F WDG G T + Sbjct: 113 YYAGQVSFADATNGATVDLVDGSGNVVKTIDLGSQQAGDVTFYWDGKDDMGETVSTDALQ 172 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRG-NSGNTLDLGTYGTTTLDEVRQII 231 V + ++ +A + V + ++ + G+ + + ++ Sbjct: 173 VKV-----NGATPSKVATWATIAAVQSPADGSSSKLITALGSYSPSDALSLM 219 >UniRef50_Q2NX18 Flagellar basal-body rod modification protein FlgD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NX18_SODGM Length = 269 Score = 102 bits (254), Expect = 9e-21, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 17/224 (7%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 + + TS+ +L +FL +++AQ+KNQDPTNPM+NN+L SQ+AQ+ G+E Sbjct: 51 SDSRAATSAMDAQSQGTQELMDNFLQMMLAQIKNQDPTNPMDNNQLASQMAQMHVALGVE 110 Query: 72 KLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQA 131 KLN T+ + +++ Q++ SN +G V G + T +G EL Sbjct: 111 KLNNTVLGMGNMVNSVQAVNLSNWVGRTV--------LIVGKPSVSFEGQTAYGFELPSG 162 Query: 132 ADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTA-------PNGSYNVAIS 184 AD+V T TD+ G T D ++ G + T T Y+V+I Sbjct: 163 ADEVRVTFTDEQGKT-YTQDYKDVKPGAYKLDICKTQTMPPIVLSPLDDEKAKHYDVSIE 221 Query: 185 ASNGGTQ-LVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 A N L+ A V+ V N L LG G+ L +V Sbjct: 222 AKNKDESRPTVNALKAAKVENVFFSNGSAKLALGLDGSIYLKDV 265 >UniRef50_Q7NXC4 Basal-body rod modification protein FlgD n=1 Tax=Chromobacterium violaceum RepID=Q7NXC4_CHRVO Length = 225 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 80/224 (35%), Gaps = 16/224 (7%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 G + + + A F+TLL+AQ++NQ P +P + ++ SQLAQ+S + Sbjct: 14 SNQQGGEQKVAPAAGKNGAQPGNDMFMTLLLAQIRNQSPLDPADPSQFVSQLAQMSQMQS 73 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 + + L S + Q + +G V+ T + L Sbjct: 74 TQDMLKQLQSQGAMLRELQGVALGAQVGKPVL-------LQTDRIRSDGQGELNGRLTLS 126 Query: 130 QAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGG 189 + T +TD G R I++G+ AG F G+Y V +S ++G Sbjct: 127 GQEESATLILTDAAGQRTR-IELGKREAGASDFKIKLADY---HLAAGNYQVELSTASGS 182 Query: 190 TQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQII 231 L A V GV L L G V ++ Sbjct: 183 KGLFE---LKAEVSGVRLPVNGGEPVLSLAGLGDFPASSVSALL 223 >UniRef50_D0Y261 Flagellar hook capping protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y261_9CAUL Length = 242 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 18/235 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ AV++ + T+ + + SN +FL LL QLKNQDP +P + ++T Q Sbjct: 1 MATAVSSQNTTSVLDRINNGRTSMASNT----ETFLKLLTTQLKNQDPLSPTDTTQMTQQ 56 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 + Q++ V N L ++ G + + ++IG V + G + T Sbjct: 57 ITQMTGVEQQLVTNDLLAALVGMNTGTGLTEGVSMIGKQVTATTDSSTLKGGKAAFSWTQ 116 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-GSY 179 + +T I + G VVRT+ + +G H+ TWDG G+ PN G Y Sbjct: 117 --------AGGSTSLTVEIKNAAGKVVRTLKPDDQKSGDHTLTWDGKDDTGAQLPNGGVY 168 Query: 180 NVAISASNGGTQLVAQPLQFAL----VQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ A + + V V + + +D V I Sbjct: 169 TASVKAVGADNKDIKVTNVKGRTEGVVTAVDNFTGQPKVIV-DGQAIPIDNVIGI 222 >UniRef50_C5EXK1 Flagellar basal body rod modification protein n=3 Tax=Helicobacter RepID=C5EXK1_9HELI Length = 379 Score = 100 bits (247), Expect = 5e-20, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 84/258 (32%), Gaps = 47/258 (18%) Query: 21 SSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSI 80 N +F+ L + QLKNQDPT PME E+ +Q AQ++ V ++ + + Sbjct: 108 KDEEEDNNGLGTEAFMRLFLEQLKNQDPTAPMETQEILTQTAQLTQVEAQTQMKNAMEQM 167 Query: 81 SGQIDNSQ-----------------------------------SLQASNLIGHGVMIPGT 105 + + + Q + N +G I T Sbjct: 168 TTTMQSMQETNEKTIEAQQKLIKTQEKMLETMGVLAGSIQDSSIIGGYNTVGMIGNIAET 227 Query: 106 TVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTA-------- 157 A + A+ F + + TITDK+ V+R ID+ Sbjct: 228 PYTALKVEKNEAIDFELYFDEPIDPTKGQPKITITDKDNNVIREIDLAAQDEEGNYIYLN 287 Query: 158 --GVHSFTWDGTLTDGSTAPNGSYNVAISAS--NGGTQLVAQPLQFALVQGVIRGNSGNT 213 G F WD + G NG Y V + + Q L VQ ++ Sbjct: 288 KEGYVEFEWDTRDSKGKFVANGDYTVKAEYNLDSATNQYKETQLGRGEVQSILFDAGVPY 347 Query: 214 LDLGTYGTTTLDEVRQII 231 + LG + T + V Sbjct: 348 VKLGDHLTVPIIYVTSYY 365 >UniRef50_Q8D3G1 FlgD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3G1_WIGBR Length = 279 Score = 99.6 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 19/215 (8%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 +N L +FL +++ Q+KNQDPT+P++NN LT+Q+ Q+ T GIEKLN ++ I Sbjct: 75 NSNNLQSLTDNFLKMILVQIKNQDPTHPIDNNHLTTQMTQMHTALGIEKLNKSIQEIKQT 134 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 ++NSQ + SN IG VMI G+ + T +G +L +D V T+TD Sbjct: 135 MNNSQYINLSNWIGKTVMI--------EGNPIISFNGNTNYGFQLSTKSDNVFLTLTDLE 186 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTA-----PNGSYNVAISA---SNGGTQLVAQ 195 G + L +GV+ + + A P ++ +N G + + Sbjct: 187 G-NIYKEQFKNLKSGVYKLNI--KNANTNPAINENFPESRKTFKVNFEAINNDGNRPDIR 243 Query: 196 PLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 L+ + VI N + L LG EV I Sbjct: 244 SLKSETINNVIFKNGSSKLSLGRGKLIDFTEVISI 278 >UniRef50_A6Q2N2 Flagellar hook capping protein FlgD n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2N2_NITSB Length = 220 Score = 99.6 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 19/213 (8%) Query: 22 SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 + + FL +L+A + QDP + + ++ + + T++ +++ Sbjct: 21 DKNVDQSKMDKEGFLKVLLANFQFQDPFEAQDIAKFIDNTVKLRELEVLNNFETSVNTLA 80 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 Q L A+NLIG V+ G+E T V+L + + + + D Sbjct: 81 N--GTQQLLSAANLIGKKVVYT--------GNETFVENGKTDVSVKLDEDVNYLALYLYD 130 Query: 142 KNGAVVRTIDIGE--LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQL--VAQPL 197 +NG VV ++ E F + + P+G YNV + A NG ++ Sbjct: 131 ENGNVVYQKELTETIPAGTSKRFEI-----EDESIPDGVYNVGVVAKNGEEEISQAEIIH 185 Query: 198 QFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 LV GV + S L + + + L++V I Sbjct: 186 STGLVAGVEKEGSEIVLSVNSGQSVKLNDVYSI 218 >UniRef50_Q07ST8 Flagellar hook capping protein n=14 Tax=Bradyrhizobiaceae RepID=Q07ST8_RHOP5 Length = 243 Score = 99.6 bits (246), Expect = 8e-20, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 48 PTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV 107 P +P++ N+ T QL Q + V K N+ L ++ +Q+ QA N +G ++ G T Sbjct: 54 PLDPLDTNQFTQQLVQFAGVEQQLKSNSQLEALVKLQTGAQATQALNFVGATAIVDGATT 113 Query: 108 LAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGT 167 G V++ +IT+ G V + + +F WDG Sbjct: 114 KLAGGKATWGFNVPKDSTVKV---------SITNATGQTVYSGNFAMKAGDHQAFVWDGK 164 Query: 168 LTDGSTAPNGSYNVAISASNG-GTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDE 226 DGS G Y + ++ G + V + L + T T+D+ Sbjct: 165 GKDGSQWAAGDYKLTAVGTDSQGNAVTVSTEIIGQVDSADLSANPPLLSIAG-QTFTVDQ 223 Query: 227 VRQII 231 +++I+ Sbjct: 224 IKKIV 228 >UniRef50_C8WBV8 Flagellar hook capping protein n=4 Tax=Zymomonas mobilis RepID=C8WBV8_ZYMMN Length = 230 Score = 98.9 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 10/208 (4%) Query: 24 TGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQ 83 AA + FLTLL QLK QDP +P++N ++ +Q+AQ S+V+GI +LNTT+ SI Sbjct: 31 KDPTAALSSTDFLTLLTTQLKYQDPDSPVDNTQMAAQMAQFSSVAGINQLNTTVSSIQSD 90 Query: 84 IDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKN 143 + NS+ SN IG + + ++ T V+L AA V ++ D Sbjct: 91 VSNSRLGNVSNWIGKAG--------LVSSNIATSIDGTFAGQVKLDSAASDVKISLADSA 142 Query: 144 GAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQF-ALV 202 G VV + D G +AG SF++ G + G+T +G V ++A+N V+ ++ Sbjct: 143 GKVVYSKDYGSQSAGDVSFSFSGNDSSGNTV-SGPLTVKVNATNSSGGSVSNSTSTWTMI 201 Query: 203 QGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V SG T + + GT ++ I Sbjct: 202 DAVNSPASGTTQIVTSLGTYDPSDITSI 229 >UniRef50_Q9KA39 Flagellar hook assembly protein n=2 Tax=Bacillus RepID=Q9KA39_BACHD Length = 171 Score = 98.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 53/111 (47%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TTT+ + + ++ + FL +L+AQL+ QDP NPM++ E +Q+AQ Sbjct: 1 MTTTNGIDGSYYYENRPKEQSNSGILGKDDFLRILIAQLQYQDPLNPMDDREFIAQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 S++ + +N+ + Q + +Q S LIG V + +E Sbjct: 61 SSLEQMTNMNSAIQQFVKQQTSQTLVQHSELIGKRVTWKRIIDIDEYRQKE 111 >UniRef50_A5FUQ9 Flagellar hook capping protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUQ9_ACICJ Length = 253 Score = 96.9 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 10/202 (4%) Query: 29 ADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQ 88 + + FLT+L QL+NQDPT+PM +++ TS+L Q S V N +L + Sbjct: 60 SSNYNDFLTMLTTQLQNQDPTSPMSSSQFTSELVQFSQVEQQISTNQSLTQLLQLTQAGD 119 Query: 89 SLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVR 148 QAS+++G V + + G+ T T V + + + G + Sbjct: 120 LTQASSMLGSKVTATSSQLPLQNGTGTLNFTAPTSGPVAIA---------VYNGAGQQI- 169 Query: 149 TIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRG 208 TAG +S+TW+G G+T P+G+Y VA+ P + Sbjct: 170 LDTSMNATAGSNSWTWNGKDASGTTVPDGAYKVAVVEGGANGSTTTLPFTVTGTATGVTS 229 Query: 209 NSGNTLDLGTYGTTTLDEVRQI 230 S + + V + Sbjct: 230 GSNSVSLQMGGVSVPFTAVTNV 251 >UniRef50_B3QDF7 Flagellar hook capping protein n=9 Tax=Bradyrhizobiaceae RepID=B3QDF7_RHOPT Length = 222 Score = 95.8 bits (236), Expect = 9e-19, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 12/230 (5%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 + ++ + +T+++SS + ++++ S FL+LL+++L+NQDP N + +QL Sbjct: 1 MTTISSAVSTAATTTSTASSTSSASSSLSSSDFLSLLISELQNQDPLNATSTTDFINQLT 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTT 122 + S +++N+++ S++ + +L + N IGH V T GS Sbjct: 61 SYANFSQQQEINSSMTSLANSFSSLVTLNSVNYIGHTVEAKTDTATLTGGSATFG----- 115 Query: 123 PFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN-GSYNV 181 L AA V+ +I D +G V + G AG +S TWDG + G+ + G Y + Sbjct: 116 ---YTLSAAASDVSISIKDSSGNTVWSGT-GSGNAGSNSLTWDGKNSSGTQLADGGQYTI 171 Query: 182 AISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++SA++ G + V G+ +S L + + + + + Sbjct: 172 SVSATDSAGNSVYKYSTVSGTVTGIDTSSSTPALLVNGV-SVSASNIIGV 220 >UniRef50_D2TJ83 Lateral flagellar rod protein n=2 Tax=Citrobacter RepID=D2TJ83_CITRO Length = 270 Score = 93.8 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 15/204 (7%) Query: 31 LQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSL 90 +FLTL VA+++NQDPT+P + + QL+ ++ V+ +E+++ + + + N Q + Sbjct: 63 GVETFLTLFVAEIQNQDPTDPADPTDYIDQLSSMAQVAMMEEMSVQANTNAVLMSNIQVM 122 Query: 91 QASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTI 150 NL+G +M+ TT+ + EG V L A V D G Sbjct: 123 ALGNLVGDDIMVQTTTLQVSDSAIEGR--------VTLDDACTTVDLHFIDAAGDDYTVS 174 Query: 151 DIGE----LTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVI 206 + E + G F + P G Y++++ + G ++ + + Sbjct: 175 LLPEGGTSVGPGQVDFDINPADYG---IPPGDYDLSVVTNTGEEEVPVEVSGEVKDVRIP 231 Query: 207 RGNSGNTLDLGTYGTTTLDEVRQI 230 S L++ G + Q Sbjct: 232 LDGSTPVLNIDGVGEVPFTMISQF 255 >UniRef50_B9Z4U7 Flagellar basal body rod modification protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4U7_9NEIS Length = 226 Score = 93.8 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 94/233 (40%), Gaps = 17/233 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+++ + + + + + G + + F+TLL+AQ+KNQ+P +P + ++ +Q Sbjct: 1 MTVSNSLLNDSTASSQGATPVASNGQSQSSGSDMFMTLLMAQIKNQNPLDPADPSQFVNQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 L Q++ + + + L + + Q L N +G+ V++ TV G +T Sbjct: 61 LVQMNQMQTSLGMLSQLKDNAVLLRELQGLGLGNQVGNSVLVQSNTVQLDGTPLSGRLT- 119 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 A+ ID+G AG +F+ + GSY Sbjct: 120 --------LSGAENQVTLQLTGADGKQHPIDLGAQPAGEVAFSVNPADYG---LAAGSYA 168 Query: 181 VAISASNGGTQLVAQPLQFALVQGVIRG--NSGNTLDLGTYGTTTLDEVRQII 231 ++++ ++ T ++ A+VQGV L L G V +++ Sbjct: 169 LSVTTASRATPMLE---LAAVVQGVRLPVQGGEPMLTLSGLGDVPASSVSRLL 218 >UniRef50_A8VS08 Succinyl-CoA synthetase, alpha subunit n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VS08_9BACI Length = 161 Score = 93.1 bits (229), Expect = 7e-18, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 55/138 (39%) Query: 22 SLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSIS 81 + ++ + +FL LL+ QL+NQDP +PME+ E SQ+A S++ + +N + Sbjct: 23 AKGTGDSEMGKDAFLKLLITQLQNQDPLDPMEDKEFISQMANFSSLEQMTNMNENMNKFL 82 Query: 82 GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITD 141 SQ S++IG + ++ A +T + + Sbjct: 83 ESQQQSQFFSHSDMIGKQIEWQEEVKNENGDKRMETMSAIVQAVKFKDGIATILTESGKE 142 Query: 142 KNGAVVRTIDIGELTAGV 159 + ++ I + G Sbjct: 143 LSVDDIQKIALPNEGEGE 160 >UniRef50_A3IF23 Flagellar basal body rod modification protein D n=2 Tax=Bacillaceae RepID=A3IF23_9BACI Length = 229 Score = 92.7 bits (228), Expect = 8e-18, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 52/119 (43%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S A T+ + S + N+ + +FL LL+ QL++QDPTNPM + E SQ+ Sbjct: 7 SKATNTSITDDLYYSNYRKPTKQTGNSELGKDAFLQLLITQLQHQDPTNPMNDREFISQM 66 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 AQ S++ ++ + + S+ +Q + + +G V T + Sbjct: 67 AQFSSLEQMQNMTKAVESLLASQQQTQMMNYATFVGKEVKWHEITDKTDEKGDPVVNEG 125 >UniRef50_A3NFX4 Flagellar hook capping protein n=8 Tax=pseudomallei group RepID=A3NFX4_BURP6 Length = 241 Score = 91.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 78/231 (33%), Gaps = 16/231 (6%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + + + S + A F LL AQ++NQ+P PM+ ++ +Q+ Sbjct: 13 NTIQPRAGDMQQPGAGQHTPSPYANGANSPTDLFAKLLAAQIQNQNPLEPMDASQFVTQI 72 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 + + + + +++ + + +G VM+ ++ + + Sbjct: 73 MMGQQTEALGVVANLTQNSAALMESMLVVSLGSQVGTQVMVRTDSLELKDDTRDAR---- 128 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNV 181 + L A VT +TD G R +G G +FT D P G Y + Sbjct: 129 ----IVLDNAESDVTVVLTDSAGNSHRIA-LGAQAKGDVNFTIDPEELG---LPAGQYKI 180 Query: 182 AISASNGGTQLVAQPLQFALVQGVIR-GNSGNTLDLGTYGTTTLDEVRQII 231 + ++G A ++ V + L + G + + Sbjct: 181 RVETASGAK---AGVEIEGTLENVRLAADGKVILHVAGVGDVETSSISSFL 228 >UniRef50_C1PG44 Flagellar hook capping protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PG44_BACCO Length = 215 Score = 91.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 79/226 (34%), Gaps = 16/226 (7%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + DP+ + +++S + + +FL +L+AQL+NQDPT PM++ + SQ+AQ Sbjct: 4 TSIIDPSLLLSNQNTATSTRTGSKTLDKDAFLKILIAQLQNQDPTKPMDDTQFVSQMAQF 63 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S++ + L + ++ SQ + + IG V T + + T T Sbjct: 64 SSLEQMTNLKNDIDNLIKLSQQSQQIAYTQYIGRTVSWEKTETADDGTASVKSGTGTITG 123 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAIS 184 A VT T+ D + + + G Sbjct: 124 ISFGDDNA--VTFTLDDGTKISSSDMRGINSNTSKEAALIQASHLIGKKVA--------Y 173 Query: 185 ASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 ++ G + A V V N L ++ +I Sbjct: 174 TNDAGKEETAS------VSAVAIQNGSLVFTLDNGQKAASGQLTKI 213 >UniRef50_B2V6Q5 Flagellar hook capping protein n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Q5_SULSY Length = 218 Score = 90.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 16/231 (6%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M TT P + + N+ Q+ FL +L+A LK QDP N + ++ Sbjct: 1 MIDTSLTTFPDSATSNKPKVVDANYDNSKMSQNDFLKVLLADLKWQDPMNAKDISDFIDN 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 ++ + ++ + + ++S + + AS++IG V G++ Sbjct: 61 SVKLRQMESLDSIQKLVDTLSTF--TNSIVNASSMIGKKVKYE--------GNQTYISQG 110 Query: 121 TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN 180 + +L A V ++ D NG +V + L + +G Y Sbjct: 111 QSNIEFKLNAPAQNVKVSLVDSNGNIVEQKEFTNLNGNTTY----PLSIENQNLTDGYYK 166 Query: 181 VAISASN-GGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 V +SA + G + A +V G+++ NS + + +LD++ +I Sbjct: 167 VLVSAKDSAGNDVQATIYSTGIVNGILKDNSSLSAKINNV-NVSLDKILEI 216 >UniRef50_Q5WFR3 Flagellar basal-body rod modification protein FlgD n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFR3_BACSK Length = 144 Score = 90.4 bits (222), Expect = 5e-17, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%) Query: 17 TTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTT 76 ++S + N A Q +FL LL+ QL+NQDP+NP+E+ E +QLA S + + KLN+T Sbjct: 11 SSSQNQQRQPNNALGQDAFLKLLITQLQNQDPSNPIEDREFIAQLATFSQLEQLTKLNST 70 Query: 77 LGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 + + + + Q + S LIG V + G + Sbjct: 71 MEYMYYEQKSQQLMALSELIGKSVEWLNEKEKVEQATVTGVKYS 114 >UniRef50_UPI0001788768 flagellar hook capping protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788768 Length = 186 Score = 89.6 bits (220), Expect = 7e-17, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ +T + + S+ G+ + FL++L+ QL++QDP PM++ E +Q Sbjct: 1 MATDPVSTKNMWPNYAKGNISTKNGNGQELGKDQFLSILITQLRHQDPLQPMQDREFIAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTG 112 +AQ +++ + +NT L ++S + AS+LIG + Sbjct: 61 MAQFTSLEQLMNINTQLTAMSQSLG-----AASSLIGKQISWMFKPEDGSDS 107 >UniRef50_A4J759 Flagellar hook capping protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J759_DESRM Length = 185 Score = 89.2 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 15/175 (8%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 + TN + S + +FL +++AQL+ QDP++PM++++ Q+A +T Sbjct: 2 EVNQTNNSDLYYENRKTKESVKTLDKDAFLQIMIAQLRYQDPSSPMDSSKFIEQMAMFTT 61 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSE-----EGAVTTT 121 + + LNT + + + AS+LIG V + E E +V Sbjct: 62 LEQMTNLNTNMERL---YHLQELNHASSLIGKRVNLIAEEEQVIGEVERVTLGENSVNIW 118 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPN 176 V +TD+ + D G+ + T+G P+ Sbjct: 119 VAGHPYSLDQVISVERGVTDEPEELPEVPDSGDEPPVDDT-------TEGEPIPD 166 >UniRef50_Q67K21 Flagellar hook assembly protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K21_SYMTH Length = 139 Score = 88.5 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 10/139 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+ T ++ + FL LLV QL+ QDP NP+++ E +Q Sbjct: 1 MSVNGVQGVQPGTASGAGQTAESRRPTDQLGKMEFLQLLVTQLRYQDPLNPIDDREFMAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQ S + + + + ++ +L+G V GT G Sbjct: 61 LAQFSALEQMTE----------NVRWARLSYGLSLVGAAVKYWGTEGQPEIGIVYAVRID 110 Query: 121 TTPFGVELQQAADKVTATI 139 + + L ++ I Sbjct: 111 SGEPLLNLGNREIRLEQVI 129 >UniRef50_C4V0N7 Possible flagellar basal body rod modification protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0N7_9FIRM Length = 168 Score = 88.5 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 60/148 (40%) Query: 11 TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGI 70 ++ + + + + N+A + +FL LLV Q++ QDP NP +N E SQLAQ S + + Sbjct: 14 SDYEKAQNQAKAASKDNSALGKDAFLQLLVTQMRYQDPLNPQDNAEYLSQLAQFSALEQM 73 Query: 71 EKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 ++ L +S +DN S + + P + G + V Sbjct: 74 TNVSKGLEKVSKIVDNIDSSVLIGQLSSMIGQPIQWITETKGKDGAVTKQNFEGKVIGVS 133 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAG 158 D + I D NG + + G Sbjct: 134 ITDGAPSIIADVNGQSHKVQISEVVRVG 161 >UniRef50_B9KE35 Flagellar hook assembly protein FlgD n=1 Tax=Campylobacter lari RM2100 RepID=B9KE35_CAMLR Length = 335 Score = 88.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 9/189 (4%) Query: 12 NTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIE 71 N S + A + +FL LL+ +L++QDPT+PM+ ++ +Q AQ+S + + Sbjct: 27 NARAGEGDSGLVYNPGAELDKDAFLKLLLIELQHQDPTDPMDTEKMLTQTAQLSALEMQD 86 Query: 72 KLNTTLGSISGQIDNSQSLQASNL-IGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQ 130 N T+ + + Q+ A++ + + + + L + Sbjct: 87 NTNKTMTQLVDAMTKLQNSIAASTGMSALAAVGKLATVKDDYLVVADDDIQFQINMYLPK 146 Query: 131 AADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGT 190 K T D G ++ G G + A G + G Sbjct: 147 EPQKGKKTDIDTEGFELK-------KNGEDKLDITGKVDK-EIAKPGETIYVKLVDDKGQ 198 Query: 191 QLVAQPLQF 199 + + + Sbjct: 199 EETVKAVVS 207 Score = 73.4 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 1/129 (0%) Query: 102 IPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHS 161 + G + T + ++ VT TI ++ G VRT+ + ++TAG+ Sbjct: 206 VSEDQTFKIIGHKPSVDIKTAKIDSSYKSDSEPVTFTIYNEAGDPVRTMKVKDMTAGMKQ 265 Query: 162 FTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGT 221 WD T G+ P+G Y V S V + GV N + + Sbjct: 266 IVWDRTDDSGNPVPSGKYYVRASYIGEDGNTVNSTYGAYPITGVRFENGEALVGM-GGSW 324 Query: 222 TTLDEVRQI 230 +++++I Sbjct: 325 VKWEDLKEI 333 >UniRef50_A8MHE3 Flagellar hook capping protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MHE3_ALKOO Length = 141 Score = 87.7 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 51/110 (46%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++ + T S + A + +FL LLV QLKNQDP NPM++ + +Q+A Sbjct: 2 SDISKVNDTTHKYRDYSGNQEKKQTDALGKDAFLNLLVTQLKNQDPLNPMDDRDFIAQMA 61 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTG 112 Q S++ ++ LNTTL + I + +N + I V G Sbjct: 62 QFSSLEQMQNLNTTLTNTQSSIMEHITQMNNNFVKSQTNIVDQLVKINEG 111 >UniRef50_D2LSH3 Flagellar hook capping protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSH3_BACS4 Length = 149 Score = 87.7 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + T + +S + + +FL +L+ QL+NQDP NPME+ E +Q+AQ Sbjct: 1 MPNTINDSLYLSDFQKQQKARNTGDLDKDAFLRILITQLQNQDPLNPMEDKEFIAQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTG 112 +++ + +NT L +Q + S LIG V V Sbjct: 61 TSLEQMTNMNTNLQKFLDSHQ-NQFVSHSELIGKEVQWERERVNEDGS 107 >UniRef50_A4IMA1 Flagellar hook assembly protein n=5 Tax=Geobacillus RepID=A4IMA1_GEOTN Length = 142 Score = 87.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 42/106 (39%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T +N ++ + + FL +L+AQL+NQDP NPME+ E +Q+A Sbjct: 2 ATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMASF 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAG 110 S++ + + + L+ S IG V Sbjct: 62 SSLEQMMNIANLMQQWMQASGRDALLRYSEWIGKTVHWQEDDSTMS 107 >UniRef50_C6IVW2 Flagellar hook capping protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVW2_9BACL Length = 167 Score = 87.3 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 8 TDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTV 67 + + S ++ + + + +FL L++AQ++NQDP +PM+N ++ +Q+AQ ++V Sbjct: 7 SSVSWPNYSQSNVQKASTKSNELGKDAFLKLMIAQMQNQDPLSPMDNTQMVAQIAQFTSV 66 Query: 68 SGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEE 115 + ++ + ++ + N S LIG V T Sbjct: 67 EQLTNISEQIAALGESLGND-----SGLIGKEVTWVTETKTGNYDVST 109 >UniRef50_UPI0001695594 Flagellar hook capping protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001695594 Length = 197 Score = 86.5 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 + V T D + + + + +G N++ + FL +L+AQL NQ+P +PM + E +Q+ Sbjct: 13 NFEVKTRDKLSVNQKSETKTMRSGGNSSLGKDDFLKILIAQLVNQNPMDPMNDKEFIAQM 72 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMI 102 AQ + V + + + + + AS LIG V Sbjct: 73 AQFTAVEQMTFMAEQMYDLRQSLGG-----ASTLIGKHVSY 108 >UniRef50_Q5DY16 Lateral flagellar rod protein (FlgD-like) n=8 Tax=Enterobacteriaceae RepID=Q5DY16_ECOLX Length = 234 Score = 86.5 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 88/231 (38%), Gaps = 11/231 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQ-SSFLTLLVAQLKNQDPTNPMENNELTS 59 +++ + PT T S ++S T S++ +FLTL VA+++NQDPT + E Sbjct: 4 LALNAQSPQPTATAESNNVAASDTTSSSDSSPVDTFLTLFVAEIQNQDPT---DATEYID 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 QL+ ++ V+ +E+++ + + + N Q + NL+G +M+ + + Sbjct: 61 QLSSMAQVAMMEEMSVQANTNAVLMSNIQVMALGNLVGDDIMVQ----TTALQVSDQTIN 116 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 A T D + + G F+ + P G Y Sbjct: 117 GRATLDDACTTADLHFTDAAGDDYTVSLIPQGSSSVGPGQVDFSINPADYG---IPPGDY 173 Query: 180 NVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQI 230 +V++ + G ++ + + S L++ G + Q Sbjct: 174 DVSVVTNTGEEEVPIEVSGEVEDVRIPLDGSSPVLNVAGVGEVPFTMISQF 224 >UniRef50_B0THA9 Flagellar hook capping protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THA9_HELMI Length = 188 Score = 86.5 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 3/151 (1%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T D + + + ++ SN+ + FL LLV QL+ QDP PME+ E +Q+AQ S+ Sbjct: 4 TIDNVGSVYTAPAGTTTKKSNSQLGKDDFLKLLVTQLRYQDPMKPMEDKEFIAQMAQFSS 63 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 + ++ + + + L + S V V Sbjct: 64 LEQMKNIADGFEKFQSSQQKAMTGLNDVLAKFISVQQQMQADNMIVSAVSFVGKQLEATV 123 Query: 127 ELQQAADKVTATITDKNGAVVRTIDIGELTA 157 + + D++G +V GE+TA Sbjct: 124 PILDEKGNP---VKDQDGDIVTEKIAGEVTA 151 >UniRef50_B8CYR3 Flagellar hook capping protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYR3_HALOH Length = 142 Score = 86.5 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 5/142 (3%) Query: 1 MSI-AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M++ A T + T S + + +F LL+ QL++QDP PME+ E + Sbjct: 1 MTMLARTFSVTPQTSQSNEKVTMERNDGNNLDKDAFFKLLITQLRHQDPLKPMEDREFIA 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAV 118 Q+A+ S++ + +N L + + Q + LIG V + +G V Sbjct: 61 QMAEFSSLEQMANMNENLSTF---MRMESLSQGAALIGRNVEYVDSQSGRILSGKVTKVV 117 Query: 119 TTTTPFGVELQQAADKVTATIT 140 + L TIT Sbjct: 118 YESGTLYAHLDNDVKIPVDTIT 139 >UniRef50_C0Z6Q7 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6Q7_BREBN Length = 310 Score = 86.1 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 73/240 (30%), Gaps = 23/240 (9%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS TT S + Q++F+ L++ QLK+QDP +PM+N++ Q Sbjct: 1 MSDNGTTVKNNPYIQPHMSYKGKKEFSTELDQNAFMKLMLEQLKHQDPMSPMDNSQFIQQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQ-------SLQASNLIGHGVMIPGTTVLAGTGS 113 + ++ V I K+ T + + + + +L M T G Sbjct: 61 TSMLTMVEKITKMTTLMEQSNNSMVTLDKYEKLVGRTASYSLTTKDEMTGETKTEKKEGV 120 Query: 114 EEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGST 173 + + + A + + D +G + + L V G Sbjct: 121 LDAVY--MDQGKIYFRIAGESTPIPLADVSGLESQGLAGNTLDNSVKYMEMIGREIS--- 175 Query: 174 APNGSYNVAISASNGGTQLVAQPLQF------ALVQGVIRGNSGNTLDLGTYGTTTLDEV 227 Y V G + ++ G N L T +E+ Sbjct: 176 -----YKVTKEVDRDGNPDTKNDISKVDEILNGVITGFTTKNGTAQFQLDNGSTVKAEEI 230 >UniRef50_UPI00016996F7 flagellar basal body rod modification protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016996F7 Length = 115 Score = 86.1 bits (211), Expect = 8e-16, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 126 VELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISA 185 +EL A VT IT+ NGA+VR +++G G +F+WDG G A +G Y V A Sbjct: 9 IELPSNASNVTLRITNSNGALVRELELGSHEGGALAFSWDGYDDQGDFAGSGLYQVTAQA 68 Query: 186 SNGGTQLVAQPLQFALVQGVIRGN-SGNTLDLGTYGTTTLDEVRQII 231 + G ++ A V+ V G G L+L G ++++V++I Sbjct: 69 TVDGAEMAPAVHVAAEVESVSLGGSGGVRLNLVGLGQVSMNDVKEIY 115 >UniRef50_B5YIG3 Flagellar hook capping protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIG3_THEYD Length = 137 Score = 86.1 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 43/92 (46%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 T N + T + N+ + +FL LL AQLK QDP NPM+N E QLA Sbjct: 2 SDVTTIFNNPLYTVQEKTTATGNSQIDKEAFLKLLTAQLKYQDPLNPMDNTEFVGQLAMF 61 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLI 96 S + + +N TL ++ S +L + I Sbjct: 62 SALEQVININNTLEQLANSQVYSNALMIGSTI 93 >UniRef50_C0GJH6 Flagellar hook capping protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJH6_9FIRM Length = 141 Score = 86.1 bits (211), Expect = 9e-16, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 44/81 (54%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT T +T S+ TG+ + FL LLV QL+ QDP +P +N+E +Q+AQ Sbjct: 1 MTTVSAAGTTAATQQSNKATGAMQEMDKDMFLQLLVTQLRYQDPLDPQDNSEFVAQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQID 85 +++ ++ LN T+ + Sbjct: 61 TSLEQMQNLNNTMAKLLDIQS 81 >UniRef50_B2S3W7 Flagellar hook assembly scaffolding protein n=2 Tax=Treponema pallidum RepID=B2S3W7_TREPS Length = 153 Score = 85.8 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 44/82 (53%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 ++ + + + FL LL+AQL +QDPT PM++ + +Q+AQ S++ + ++ Sbjct: 26 INKQLEAGARSAKRELGKDDFLHLLIAQLTHQDPTAPMQDTQFIAQMAQFSSLEQMANMS 85 Query: 75 TTLGSISGQIDNSQSLQASNLI 96 + + N+++LQA + Sbjct: 86 AQVEKLGTLFGNTEALQAVGKM 107 >UniRef50_C6PPE7 Flagellar hook capping protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPE7_9CLOT Length = 235 Score = 85.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 89/238 (37%), Gaps = 27/238 (11%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLT--GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 + + + TN +T +S +++F +L A+L NQDP+N + E S Sbjct: 7 ATNSSDVNKTNDSNATKTSRGTRIVKKGQDMDKNAFFKILAAELSNQDPSNAKDGTEYVS 66 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 Q+AQ S++ + LNTT+ A+NLIG V + S + Sbjct: 67 QMAQFSSLEQMVNLNTTMK----------LTGANNLIGKTVNLNKLDPNGKFYSGLVSSV 116 Query: 120 TTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSY 179 + V+L ++ + DI +T + + D +G+ Sbjct: 117 VKSGDTVQLNVLVGTKKDEKGNEV-PDIEKFDIENVTEIDDMVSLNKYTND----ADGTA 171 Query: 180 NVAISASNGGTQLVAQPLQF------ALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII 231 ++ G ++ +V+GV R +G L++ +E+++ + Sbjct: 172 EFLNASVLIGKKVELNQQDSSKKNYVGIVKGVSRNANGVELNVDIGN----NEIKKFL 225 >UniRef50_B0K1S4 Flagellar hook capping protein n=9 Tax=Thermoanaerobacter RepID=B0K1S4_THEPX Length = 131 Score = 85.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 52/84 (61%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 TN V++ ++ ++ N+ + FL LLV QLKNQDP NPM++ E +QLAQ ST+ Sbjct: 4 NTNYNVTSIYNNRVSTLNSQLGKDDFLKLLVTQLKNQDPLNPMDDREFIAQLAQFSTLEQ 63 Query: 70 IEKLNTTLGSISGQIDNSQSLQAS 93 ++ +N+++ +I +++ A+ Sbjct: 64 MQNMNSSINAIRAINLIGKNIYAT 87 >UniRef50_B7J1L2 Flagellar hook capping protein n=21 Tax=Borrelia RepID=B7J1L2_BORBZ Length = 147 Score = 85.4 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 38/76 (50%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 + + FL LL+ QL+ QDPTNPM++ E +Q+AQ S + + ++ + +S + Sbjct: 31 SNKVNLGKDDFLKLLITQLRYQDPTNPMKDKEFIAQMAQFSALEQMANMSRSFEKLSSSL 90 Query: 85 DNSQSLQASNLIGHGV 100 + + L + Sbjct: 91 EIRKDLDLLGKVIKFQ 106 >UniRef50_C9LSP2 Flagellar hook capping protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSP2_9FIRM Length = 178 Score = 84.6 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 4/165 (2%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 ++ + S + N + + +FL LLV QL++QDP +P +N + +Q Sbjct: 6 LNTVTVDGVKYDRAKYEASQTKTARKNDSLGKDAFLQLLVTQLRHQDPLSPDDNTQYIAQ 65 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSL----QASNLIGHGVMIPGTTVLAGTGSEEG 116 LAQ S++ + ++ ++S + N S SN+IG + T Sbjct: 66 LAQFSSLEQMTQMVKGFENVSKLVSNIDSSVLVGSLSNMIGKNIQWTHVTKTKDAEGNPK 125 Query: 117 AVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHS 161 + T V + ++ + + +++ E+ A Sbjct: 126 TKSETFAGNVRGVKVSNGKPMVVAQDAKGKLHEVEVSEIDAIADP 170 >UniRef50_D1C163 Flagellar hook capping protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C163_SPHTD Length = 150 Score = 84.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 47/92 (51%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 ++V + +SS+ + FL LL AQL+NQDP PME+ E +QLA Sbjct: 1 MSVPGVTNQTNPGTDAASSTTFSPADRLGKQEFLMLLTAQLRNQDPLRPMEDTEFIAQLA 60 Query: 63 QISTVSGIEKLNTTLGSISGQIDNSQSLQASN 94 Q++++ ++++N TL ++ +Q+ Sbjct: 61 QLNSLEQMQQMNETLSTLVEMSVLAQTASLIG 92 >UniRef50_B1YI97 Flagellar hook capping protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YI97_EXIS2 Length = 156 Score = 84.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 1/155 (0%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +T + + + S+ + + F+ +L+AQL NQDPT PME+ E SQ+AQ Sbjct: 1 MTDSIKNDASSYQLPDKTKVPSSNSMDKDMFMKILIAQLSNQDPTAPMEDKEFISQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S++ ++ + + ++ + + SNLIG+ V TV + T Sbjct: 61 SSLEQMQSIGKGIETMMLNQHAAALMNYSNLIGNKVSYESETVTKDATGADVTSTVKETA 120 Query: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGV 159 V L D V NG V D+ E+ Sbjct: 121 NV-LSVKRDGVDILAELSNGKSVSVYDLTEIKPKE 154 >UniRef50_Q3ADD8 Flagellar hook assembly protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD8_CARHZ Length = 135 Score = 84.2 bits (206), Expect = 4e-15, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 3/130 (2%) Query: 10 PTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG 69 + +TS+++ + + + +FL + +AQL+ QDP NP + E ++LAQ + Sbjct: 6 TAVSSQMSTSANAASQTKLNLDKDAFLKIFLAQLQYQDPLNPADGTEFIAELAQFGMLEQ 65 Query: 70 IEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQ 129 + L L + + Q QA+ LIG V I G + + + Sbjct: 66 LTNLTDALTKL---LQFEQKAQAAALIGKTVKIATAAETLVEGVVSAVRWSGDQISLVVN 122 Query: 130 QAADKVTATI 139 I Sbjct: 123 GQEYSPDKVI 132 >UniRef50_UPI00016C0DB7 flagellar hook assembly protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0DB7 Length = 266 Score = 83.8 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 70/240 (29%), Gaps = 18/240 (7%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS + + + + +F++LL+ QL+ QDP +PM+N+E+ +Q Sbjct: 1 MSEVNNLSYIAPDNEIIQNKPETREPDQDLGKDAFMSLLITQLQYQDPLSPMDNSEMMAQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNL----------IGHGVMIPGTTVLAG 110 +AQ + + + + + ++ S G + A Sbjct: 61 MAQFTALEQMMNVALATNKQTALSMVGNFVEYSYKNLETGKTEYSSGKVEYVKTQGDDAL 120 Query: 111 TGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDG---- 166 G E V V + V + V +G Sbjct: 121 LGIGENEVKLADIIQVLNTENVKPQITAFETLGKTVQAQSEHMNDDGIVEPSLIEGEVLE 180 Query: 167 -TLTDGST---APNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTT 222 L DG G+Y + I + + V +GN +++ Sbjct: 181 IKLKDGKPFVVIGTGTYELEIDFEKVKNVVENPSITGRTVTATTNDYNGNPIEVSGKAEY 240 >UniRef50_UPI0001BCF0E6 flagellar basal body rod modification protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF0E6 Length = 174 Score = 83.8 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 54/134 (40%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 N A + +FL LLV Q+K QDP +P +N+E SQLAQ S + + ++ L +S + Sbjct: 34 KRNDALGKDAFLQLLVTQMKYQDPLDPQDNSEYLSQLAQFSALEQMTNVSKGLSEVSKIV 93 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNG 144 DN S + + P + G + + V D + I D G Sbjct: 94 DNINSSVLIGQLSSMIGQPVQWITETKGEDGQLSKQSFEGKVIGVSITDGTPSIIADVGG 153 Query: 145 AVVRTIDIGELTAG 158 + + G Sbjct: 154 KTHQVQISKVVRIG 167 >UniRef50_A1HN34 Flagellar hook capping protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN34_9FIRM Length = 136 Score = 83.8 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 10/102 (9%) Query: 25 GSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQI 84 N + FL LLVAQL+ QDP PME+ E +Q+AQ S++ I+ LN+T+ ++ Sbjct: 22 KKNDQLGKDDFLKLLVAQLRYQDPMKPMEDKEFIAQMAQFSSLEQIQNLNSTMVTM---- 77 Query: 85 DNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGV 126 QA LIG V G+ + + Sbjct: 78 ------QAMGLIGKTVRWQNENGAEQAGNVRAVKISDRQPYI 113 >UniRef50_C0QVF9 Flagellar hook capping protein n=2 Tax=Brachyspira RepID=C0QVF9_BRAHW Length = 264 Score = 83.8 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 + + + + + +FL LL Q+ +QDP +PM+N ++ +QLAQ S+V + ++ Sbjct: 23 AFNLQHNFQRDPTQNSLGKDAFLKLLTVQMSHQDPLSPMDNRDMIAQLAQFSSVEQMTEV 82 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 N L S+ + + G L T Sbjct: 83 NKNLDSMKTFYSSQTGYSMLGKSVEVMDEAGNRFLGPVEMVMENDTG 129 >UniRef50_A3DCN1 Flagellar hook capping protein n=3 Tax=Clostridium thermocellum RepID=A3DCN1_CLOTH Length = 323 Score = 83.4 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 1 MSIAVTTTDPTNTGV-STTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M++ T + +T++ S + + FL LL+ QL+ QDP NP+++ E S Sbjct: 1 MAVDAVGRQKTIQEIIDSTTNKSTQRNTGELGKDEFLNLLITQLQYQDPLNPVDDKEFIS 60 Query: 60 QLAQISTVSGIEKLNTTLGS 79 Q+AQ S + ++ LN + + Sbjct: 61 QMAQFSALEQMQNLNKSFSA 80 >UniRef50_A6TRQ2 Flagellar hook capping protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRQ2_ALKMQ Length = 134 Score = 83.4 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 49/131 (37%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 ++ + + + + +FL LLV Q+ NQDP NPME+ E SQ+AQ Sbjct: 1 MSNISEIQNQYRYHEPNEKKKNTSDLDKDAFLKLLVTQMSNQDPLNPMEDREFISQMAQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 S++ ++ LN L + + + +NL+ I L + + Sbjct: 61 SSLEQMQNLNDGLKDTKELLADHITQMNNNLVKSQTTIADQLDLMNIQINKVLNHISPEA 120 Query: 125 GVELQQAADKV 135 A Sbjct: 121 PENEDNEAGGT 131 >UniRef50_C1TKJ1 Flagellar hook capping protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKJ1_9BACT Length = 150 Score = 83.1 bits (203), Expect = 7e-15, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 4/116 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 +TT +P ++ S+ ++ +A + FL L + QLKNQDP PM+ NE+ +Q +Q Sbjct: 1 MTTVNPYSSASSSYTAGQSREIKSAMDKDDFLKLYIEQLKNQDPLEPMDTNEMAAQFSQF 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +TV + +N+++ + Q A + IG V T Sbjct: 61 TTVEQLMNMNSSMEEMLSL----QLGNAVSYIGFEVTYSHAYQDDQGNQLTEEKTG 112 >UniRef50_Q18CZ5 Putative basal-body rod modification protein n=5 Tax=Clostridium difficile RepID=Q18CZ5_CLOD6 Length = 202 Score = 82.7 bits (202), Expect = 8e-15, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 4/163 (2%) Query: 3 IAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLA 62 IA T + + + G + F+ +LVAQ+ NQDP NP + E SQLA Sbjct: 30 IANKQVRSKGNQTVTDNGTPIIGQGDDADKDLFMKILVAQMGNQDPMNPQDPTEYVSQLA 89 Query: 63 QISTVSGIEKLNTTLGSIS----GQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 Q +T+ + +N L + + NS A++LIG V + G Sbjct: 90 QFATLEKMSAMNEKLDVLLALSNSTLINSALSMATSLIGKEVEVSGEEKEDENIVGVVKS 149 Query: 119 TTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHS 161 T V L+ D T+ K +++ ++ E + + Sbjct: 150 TYIKDGEVHLELEVDGSDKTVGVKYEKLLKIGEVDENSGEEND 192 >UniRef50_A0Q029 Flagellar hook assembly protein FlgD n=3 Tax=Clostridium RepID=A0Q029_CLONN Length = 274 Score = 82.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 10/125 (8%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 +T + + +++FL +L A+L NQDP N ++ + SQLAQ S++ + L Sbjct: 48 SGATKRGTKIVKKGQEMDKNAFLKILTAELTNQDPMNAKDSTQYISQLAQFSSLEQMANL 107 Query: 74 NTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAAD 133 N+T+ A N++G V + + L Sbjct: 108 NSTM----------SFNSAGNMVGKTVALSSYDDYGRQYGGTVTNVRKDGDDIILSVNVA 157 Query: 134 KVTAT 138 K Sbjct: 158 KYKGN 162 >UniRef50_D1B6B9 Flagellar hook capping protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B9_THEAS Length = 134 Score = 82.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 4/127 (3%) Query: 13 TGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEK 72 T ++ + + FL +L+AQL +QDP +P+++ + +Q+AQ S + Sbjct: 8 TQAASGGQEATRAVKKELGKDDFLKILIAQLTHQDPLDPLKDRDFIAQMAQFSALEQQMN 67 Query: 73 LNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAA 132 + + +S A N +G V G + + L Sbjct: 68 IAKGIEGLSKL----SMASAVNYVGRTVGYTDDQGQEAAGVVKFVEMKDGSVTLHLADGN 123 Query: 133 DKVTATI 139 + Sbjct: 124 SIPMEKV 130 >UniRef50_C5RFU5 Flagellar hook capping protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFU5_CLOCL Length = 217 Score = 82.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 20/212 (9%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 S + + T++ + ++ F+ LL AQLKNQDP+NP ++ + +Q+ Sbjct: 13 STETNKANNGVVTGTKTANGTKIVDGKTTDKNMFVRLLSAQLKNQDPSNPADSTQYVAQM 72 Query: 62 AQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTT 121 AQ S + + LNTT+ A+NL+G V+ T + A TT Sbjct: 73 AQFSALEQMTNLNTTMT----------FSSANNLVGKTVVTKYTDEKGNYITGTVAGTTQ 122 Query: 122 TPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAP------ 175 V L + T++D + + T + + + Sbjct: 123 KDGNVYLLLDSADGKFTMSDILSVEQKQELSSAGEYVGKNVTVNRVDENKNYLKGKITSV 182 Query: 176 ----NGSYNVAISASNGGTQLVAQPLQFALVQ 203 +G + G L A ++ Sbjct: 183 INGLDGYLYGKLQYVKDGQTLSATIALKEIIT 214 >UniRef50_B8FTP2 Flagellar hook capping protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTP2_DESHD Length = 184 Score = 81.9 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 4/112 (3%) Query: 2 SIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQL 61 ++ + ++T S SS+ + + FL LLVA+L NQDP +PM+N ++ +Q+ Sbjct: 4 TVDTNYSKYSSTSESKQSSAVSDATKEVLGKDDFLKLLVAELTNQDPLSPMDNKDMITQM 63 Query: 62 AQISTVSGIEKLNTTLGSIS----GQIDNSQSLQASNLIGHGVMIPGTTVLA 109 AQ S++ + ++ ++ ++ NS Q + LIG V Sbjct: 64 AQFSSLEQMNNMSKSMENLVGAFGALFQNSLLSQGAALIGKHVEGANIDGSG 115 >UniRef50_B7GGB3 Flagellar hook capping protein n=3 Tax=Bacillaceae RepID=B7GGB3_ANOFW Length = 163 Score = 81.9 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%) Query: 7 TTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIST 66 T + +S + ++ + FL +L+AQL++QDP NPME+ E SQ+A S+ Sbjct: 10 TAIDPSLLLSQRQVAQRETGKSSLGKDDFLKILIAQLQHQDPLNPMEDREFISQMANFSS 69 Query: 67 VSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 + + ++ L + L +I + + E T T Sbjct: 70 LEQMVNMSNMLSKFIETQTGTSEKLVGTLDALQKLIQQQSAPSLAQYSEWIGKTVTWD 127 >UniRef50_Q8EQX6 Flagellar hook assembly protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EQX6_OCEIH Length = 172 Score = 81.9 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 48/103 (46%) Query: 9 DPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVS 68 ++ + + + + FL LL+ QL+NQDPT PM++++ SQ+A S++ Sbjct: 2 TSIDSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSLE 61 Query: 69 GIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGT 111 + ++ ++ + S LQ S++IG V G Sbjct: 62 QMMNMSNSIEMLVNNSLVSPVLQYSHMIGEEVSYMTFDEETGK 104 >UniRef50_Q893Y6 Putative basal-body rod modification protein flgD n=1 Tax=Clostridium tetani RepID=Q893Y6_CLOTE Length = 174 Score = 81.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 12/136 (8%) Query: 1 MSIAVTTTDP--TNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELT 58 MS A+ + TG T + + +++FL +L A+L +QDP + + E Sbjct: 1 MSDAIDSILSKKPVTGNYTDRGTKIVRPGEELDKNAFLRILAAELSHQDPLSAKDGTEFV 60 Query: 59 SQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAV 118 +Q+AQ +++ + LN T+ + A++LIG M+ T Sbjct: 61 TQMAQFTSIEQMSNLNNTM----------RFAGATSLIGKYAMVNNTDTYGNLYHGVITG 110 Query: 119 TTTTPFGVELQQAADK 134 + +++ + Sbjct: 111 VSRDKGSIKINMVVGE 126 >UniRef50_P96970 FlgD (Fragment) n=1 Tax=Proteus mirabilis RepID=P96970_PROMI Length = 182 Score = 81.1 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 7/177 (3%) Query: 5 VTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQI 64 + SS + D++ +FLTLL+ Q++NQDPTNPM+NNELTSQLAQI Sbjct: 1 MNEPTDNTIIGEAPSSYHTKKGGSDDIKGNFLTLLITQMQNQDPTNPMQNNELTSQLAQI 60 Query: 65 STVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPF 124 STV GIE LN T+ +I GQID SQ+L+A++L+ H VMI G + + + Sbjct: 61 STVEGIETLNKTVNTIVGQIDQSQALRATSLVNHMVMIAGNDIYVDKSNNGENAGSDADT 120 Query: 125 GVELQQAADKVTATIT------DKNGAVVRTIDIGELT-AGVHSFTWDGTLTDGSTA 174 ++ + D + D + + G + + + + T + T + G+ Sbjct: 121 DIDTDKTPDTKLDPLLRSADTPDPDNENIFASAFGFESFSPIDTLTVNITDSSGAKV 177 >UniRef50_B0SF84 Endoflagellar hook capping protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SF84_LEPBA Length = 194 Score = 81.1 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 38/73 (52%) Query: 15 VSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLN 74 S + + FL LL+ QL +QDPTNP+++ + +Q+AQ S++ ++ ++ Sbjct: 39 TSGLKGIEIREKQKELGKDDFLKLLLTQLSHQDPTNPVQDKDFIAQMAQFSSLEQMKNIS 98 Query: 75 TTLGSISGQIDNS 87 + + + + S Sbjct: 99 SGIARMESKQSYS 111 >UniRef50_Q9WW43 Flagellar hook assembly protein FlgD n=5 Tax=Treponema RepID=Q9WW43_TREDE Length = 169 Score = 81.1 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 42/83 (50%) Query: 14 GVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKL 73 ++ + + + FL LL+AQL +QDPT+PME+ + Q+AQ S++ + + Sbjct: 42 TLNKQNFAETRVPKQQLGKDDFLQLLIAQLTHQDPTSPMEDTQFIGQMAQFSSLEQMTNM 101 Query: 74 NTTLGSISGQIDNSQSLQASNLI 96 N +++ + S ++ A Sbjct: 102 NKNFAALNELMTGSSAVNAVGKK 124 >UniRef50_Q97H57 Flagellar hook assembly protein FlgD n=1 Tax=Clostridium acetobutylicum RepID=Q97H57_CLOAB Length = 239 Score = 80.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 4 AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQ 63 ++T T + + + + Q +FL +L+A++ +QDPT+ ++ + +QLAQ Sbjct: 10 DLSTVTITENSKTAGGTQIVRNAGNTLGQDAFLKILIAEMSHQDPTSQQDSTQYIAQLAQ 69 Query: 64 ISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTP 123 S + + LN T+ + SL + G T Sbjct: 70 FSNLEQMTNLNRTM-----TFSGASSLMGGTVTLKQYDPDGVPYRGEVQKVTKNGDTIQI 124 Query: 124 FGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAI 183 + + + V D NG VVR T T ++G+ + + N+ Sbjct: 125 YVKLIDSNGNYVRQEKVDGNGNVVRDSKGNIEYETE---TVPQTDSNGNVVKDSNGNIMY 181 Query: 184 SASNGGTQLVAQPLQFALVQGVI 206 + ++ V V Sbjct: 182 KTQD---VYKVIAFDYSQVNSVS 201 >UniRef50_A1UTS5 Flagellar hook capping protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UTS5_BARBK Length = 190 Score = 80.4 bits (196), Expect = 5e-14, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 1/121 (0%) Query: 1 MSI-AVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTS 59 M++ V G + TG+ +F+ LLVAQ+KNQDPTNPM + E + Sbjct: 1 MTVGTVGGPGFLRGGGEKQQDTPDTGAKKNTDYDTFVKLLVAQMKNQDPTNPMNSTEFVA 60 Query: 60 QLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVT 119 QLA S V K+N L + S + G + S + Sbjct: 61 QLASFSMVEQAIKMNDKLEQVLANGAISGAEGYVGKYIQFEDKDGNIIEGYVKSVDIYSD 120 Query: 120 T 120 Sbjct: 121 G 121 >UniRef50_C6D2W6 Flagellar hook capping protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2W6_PAESJ Length = 182 Score = 80.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 6/142 (4%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 M+ + N S ++ A + +FL LLV QLKNQDP P +N +Q Sbjct: 1 MATVSSKVMWPNYSTSNVKAAGKDTDKNALGKDAFLELLVTQLKNQDPLQPQDNAAFITQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 +AQ ++V + ++ L + N AS++IG V T AV + Sbjct: 61 MAQFTSVEQLMNMSDQL-----SLLNQNLGTASSIIGKTVSWYELDDAGQTKLMYDAVNS 115 Query: 121 TTPFGVELQ-QAADKVTATITD 141 L + AD+ ++D Sbjct: 116 IVSQDGTLYAKFADETMIKLSD 137 >UniRef50_Q2NR91 Putative flagellar hook formation protein FlgD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NR91_SODGM Length = 138 Score = 80.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 90/131 (68%), Gaps = 5/131 (3%) Query: 1 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ 60 MS+AV + ++ + +++SS ++ADLQ++FLTLLVAQL+NQDPTNP++N ELT+Q Sbjct: 1 MSLAVNLNETASSASAASTTSSSGSESSADLQNNFLTLLVAQLRNQDPTNPLDNAELTTQ 60 Query: 61 LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT 120 LAQIS +S IE LNT LGSIS SQ+LQA+ L+GHGVM+ G+ + + + E ++ Sbjct: 61 LAQISILSSIENLNTMLGSIS-----SQNLQATTLVGHGVMVDGSGAVYYSRNGEFSLNA 115 Query: 121 TTPFGVELQQA 131 G + Q Sbjct: 116 DRHGGADHPQK 126 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.307 0.112 0.290 Lambda K H 0.267 0.0343 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,040,570,567 Number of Sequences: 3077464 Number of extensions: 36681445 Number of successful extensions: 172616 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1250 Number of HSP's successfully gapped in prelim test: 402 Number of HSP's that attempted gapping in prelim test: 167717 Number of HSP's gapped (non-prelim): 3670 length of query: 231 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 107 effective length of database: 658,790,820 effective search space: 70490617740 effective search space used: 70490617740 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 90 (39.5 bits)