3 c2vsqA_ Probab=100.00  E-value=0  Score=510.27  Aligned_columns=481  Identities=22%

Q ss_pred             CCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             76399999999986599769997779985589869899999999999999868889888999847899999999999985
Q batch____         6 GQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKI   85 (517)
Q Consensus         6 ~~tl~~~l~~~a~~~p~~~Al~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gi~~gd~V~i~~~~~~~~~~~~lA~~~~   85 (517)
                      ..++++.|+++|+++||++|+++.+     +++||+||+++++++|+.|++.|+++||+|++++++++++++++|||+++
T Consensus       463 ~~~~~~~~~~~a~~~P~~~Al~~~~-----~~lTy~~L~~~~~~la~~L~~~g~~~~~~V~i~~~~s~~~iv~~la~l~a  537 (1274)
T c2vsqA_         463 TKPLTYWFKEAVNANPDAPALTYSG-----QTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKA  537 (1274)
T ss_dssp             CCCHHHHHHHHHHHCTTSEEEESSS-----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHCCCCEEEEECC-----CEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf             2120248999999789960899669-----38954113233334588999768899888999837998999999999983


Q ss_pred             CCEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             85999738888999999999967982999887788888875430254421675045666675543676774205776545
Q batch____        86 GAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLC  165 (517)
Q Consensus        86 G~~~vpi~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (517)
                      |++++|+++.++.+++.++++++++++++++......+....                  ....................
T Consensus       538 G~~~vpld~~~p~~rl~~~l~~~~~~~~i~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~  599 (1274)
T c2vsqA_         538 GAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELP------------------YTGTTLFIDDQTRFEEQASD  599 (1274)
T ss_dssp             TCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCC------------------CCSEEEESSCGGGGGSCSSC
T ss_pred             CCEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHCCC------------------CCCCCCCCCCCCCCCCCCCC
T ss_conf             785350361164899999999669979998777865430154------------------34611145543334555657


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEE
Q ss_conf             45645433342100010267872157540320256666545533898210432012333420135556664102431010
Q batch____       166 YAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVL  245 (517)
Q Consensus       166 ~~~~~~~~~~~~~~~tsg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (517)
                      ......+++.+++++|||+||.||++..+|.++........ .......+......+..+..+....+.....++..++.
T Consensus       600 ~~~~~~~~~~a~ii~TSGsTG~PKgV~i~h~~l~~~~~~~~-~~~~~~~~~~l~~~~~~fd~~~~~i~~~l~~G~~~v~~  678 (1274)
T c2vsqA_         600 PATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGLVKHVD-YMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIA  678 (1274)
T ss_dssp             CCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHSSCC-SSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred             CCCCCCCCCEEEEEEECCCCCCEEEEEECHHHHHHHHHHHH-HCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEC
T ss_conf             66568998718999724889862179974899999999987-34999885899607446788999999999848889981


Q ss_pred             CCC--CCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHC-CCEEECCCCCC
Q ss_conf             023--662356888886520001221688986202432112455432011032233415899999866-98682465776
Q batch____       246 VEK--YSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERF-GVRLLTSYGMT  322 (517)
Q Consensus       246 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~YG~T  322 (517)
                      ...  .+.......+.....+....++.++..+.......  ......+..+|........+++.... +++++|.||+|
T Consensus       679 ~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~--~~~lr~v~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~T  756 (1274)
T c2vsqA_         679 DEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGEDW--MKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPT  756 (1274)
T ss_dssp             CGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCSHH--HHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCG
T ss_pred             CHHCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCHHH--CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             8010389999999998828975003699999997132242--77632999877648999999999861997799745765


Q ss_pred             HHHEEEEECCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCC--
Q ss_conf             230689723687533---245445335543222225567602488624434741157653265268755646642133--
Q batch____       323 ETIVGIIGDRPGDKR---RWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEAD--  397 (517)
Q Consensus       323 E~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~~~t~~~~~~~--  397 (517)
                      |++..++........   ...++|++.++....+.+..+..++.|..|++++.|.   .++.||+++++.|.++|..+  
T Consensus       757 E~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~i~d~~~~~~p~G~~GEL~i~G~---~va~GY~~~~~~T~~~F~~~p~  833 (1274)
T c2vsqA_         757 EGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPFGAVGELCISGM---GVSKGYVNRADLTKEKFIENPF  833 (1274)
T ss_dssp             GGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCTTCCEEEEEEET---TCCCCBTTCHHHHHHHEEECTT
T ss_pred             CHHHEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEEECCC---CCCCCCCCCHHHHHHHHCCCCC
T ss_conf             0231137312576643466542110079832898767887888897237997068---6105416897773865215878


Q ss_pred             ----CCCCCCEEECCCCCCEEEEECCCCCEEEECCEEECHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEEECCCC
Q ss_conf             ----4343310001167746999433677387879993589999999819870279999867688884799999858788
Q batch____       398 ----GWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGE  473 (517)
Q Consensus       398 ----~~~~~~d~~~~~~~g~l~i~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~V~~~~~~~~~~~l~a~vv~~~~~  473 (517)
                          .||+|||.++++++|.|+|+||+|++||++|+||+|.|||+++.+||+|++|+|++.+++.++++++|||+..  .
T Consensus       834 ~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~riel~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~v~~~--~  911 (1274)
T c2vsqA_         834 KPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGDASINAYLVNR--T  911 (1274)
T ss_dssp             STTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHHHSSSCCEEEEEEECCSSSCCEEEEEEECS--S
T ss_pred             CCCCEEEECCCEEEECCCCEEEEECCCCCEEEECCEECCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECC--C
T ss_conf             68980587281789879975999831367088888991589998876069650079999866589970799999448--7


Q ss_pred             CCCHHHHHHHHHHCCCCHHCCCEEEECCCCCCCCCCCHHHHHCC
Q ss_conf             88989999999860880218848998263889897501047409
Q batch____       474 TLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK  517 (517)
Q Consensus       474 ~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~R~~Lr  517 (517)
                      ..+.++++++++.+||.||+|+.++.+++||+|+||||||++|+
T Consensus       912 ~~~~~~~~~~l~~~lp~~m~P~~~~~~~~lP~t~~GKvdr~~l~  955 (1274)
T c2vsqA_         912 QLSAEDVKAHLKKQLPAYMVPQTFTFLDELPLTTNGKVNKRLLP  955 (1274)
T ss_dssp             SSCHHHHHHHHHHHSCGGGSCSEEEEESCCCCCSSCSSCCSCCC
T ss_pred             CCCCHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCCCCCCHHHHH
T ss_conf             76500123456430120036750244211767898642122222