BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (215 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 427 e-118 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 278 1e-73 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 238 8e-62 UniRef50_B4EY67 Nitrate/nitrite response regulator n=9 Tax=Enter... 210 3e-53 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 194 1e-48 UniRef50_B2JVP2 Two component transcriptional regulator, LuxR fa... 175 1e-42 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 164 3e-39 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 161 1e-38 UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator... 161 1e-38 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 159 9e-38 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 157 3e-37 UniRef50_A5WD77 Two component transcriptional regulator, LuxR fa... 156 6e-37 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 151 2e-35 UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL ... 151 2e-35 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 149 5e-35 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 147 2e-34 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 147 2e-34 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 145 7e-34 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 145 1e-33 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 144 2e-33 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 143 3e-33 UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Proteas... 142 8e-33 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 141 1e-32 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 141 2e-32 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 141 2e-32 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 140 2e-32 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 140 3e-32 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 140 3e-32 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 140 4e-32 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 139 5e-32 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 139 5e-32 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 139 8e-32 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 137 3e-31 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 136 4e-31 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 136 5e-31 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 136 5e-31 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 136 5e-31 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 136 6e-31 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 135 7e-31 UniRef50_C1A730 NarL family two-component response regulator n=1... 135 8e-31 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 135 1e-30 UniRef50_A2SGF9 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 134 2e-30 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 134 2e-30 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 134 2e-30 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 134 2e-30 UniRef50_C3K8H7 Putative two-component system, response regulato... 134 3e-30 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 133 3e-30 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 133 4e-30 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 133 5e-30 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 133 5e-30 UniRef50_C5VFN2 Two component transcriptional regulator, LuxR fa... 132 6e-30 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 132 7e-30 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 132 7e-30 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 132 1e-29 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 132 1e-29 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 132 1e-29 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 132 1e-29 UniRef50_Q0ZKD3 Putative uncharacterized protein n=1 Tax=Coryneb... 131 1e-29 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 131 1e-29 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 131 1e-29 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 131 2e-29 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 131 2e-29 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 130 2e-29 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_C5CCY4 Response regulator containing a CheY-like receiv... 130 3e-29 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 130 3e-29 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 130 4e-29 UniRef50_D0WKH1 Nitrate/nitrite response regulator protein NarL ... 130 4e-29 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 129 5e-29 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 129 5e-29 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 129 5e-29 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 129 6e-29 UniRef50_C4DCC2 Response regulator containing a CheY-like receiv... 129 6e-29 UniRef50_A1AXR1 Two component transcriptional regulator, LuxR fa... 129 7e-29 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 129 7e-29 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 129 7e-29 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 129 9e-29 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 129 9e-29 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 127 2e-28 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_B5JLS2 Response regulator receiver domain protein n=1 T... 127 2e-28 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 127 3e-28 UniRef50_C7MI23 Response regulator containing a CheY-like receiv... 126 4e-28 UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR fa... 126 5e-28 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 126 5e-28 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 125 7e-28 UniRef50_C6P057 Two component transcriptional regulator, LuxR fa... 125 7e-28 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 125 8e-28 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 125 8e-28 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 125 8e-28 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 125 9e-28 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 125 9e-28 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micr... 125 1e-27 UniRef50_C0WF90 Possible response regulator n=5 Tax=Corynebacter... 125 1e-27 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 125 1e-27 UniRef50_C0GEE4 Two component transcriptional regulator, LuxR fa... 124 1e-27 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 124 1e-27 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR fa... 124 2e-27 UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10... 124 2e-27 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 124 2e-27 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 124 2e-27 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 124 2e-27 UniRef50_B7DQP6 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 124 2e-27 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_C9Z3C4 Putative two-component system response regulator... 124 3e-27 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 124 3e-27 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 123 3e-27 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 123 4e-27 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 123 4e-27 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 123 4e-27 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_A6UGT6 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_Q67L26 Two-component response regulator n=1 Tax=Symbiob... 123 5e-27 UniRef50_Q5MJZ1 Nitrate/nitrite regulatory protein n=1 Tax=Methy... 122 6e-27 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 122 6e-27 UniRef50_UPI0001744EDA two component transcriptional regulator, ... 122 6e-27 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_B9XA37 Two component transcriptional regulator, LuxR fa... 122 8e-27 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 122 9e-27 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_C6P480 Two component transcriptional regulator, LuxR fa... 121 1e-26 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 121 1e-26 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 121 1e-26 UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Ta... 121 2e-26 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 121 2e-26 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 121 2e-26 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 120 2e-26 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 120 4e-26 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 120 4e-26 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_UPI0001AEC67C two-component system regulatory protein n... 120 4e-26 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 120 5e-26 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 119 5e-26 UniRef50_B9L0W5 Nitrate/nitrite response regulator protein n=1 T... 119 5e-26 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 119 6e-26 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 119 7e-26 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 119 8e-26 UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=... 119 8e-26 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 119 1e-25 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 118 1e-25 UniRef50_D1YA26 Response regulator receiver domain protein n=2 T... 118 1e-25 UniRef50_UPI00003826FC COG2197: Response regulator containing a ... 118 1e-25 UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycet... 118 1e-25 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 118 1e-25 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 117 2e-25 UniRef50_UPI0001BC30E6 two-component system, NarL family, respon... 117 2e-25 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 117 2e-25 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 117 2e-25 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 117 2e-25 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 117 2e-25 UniRef50_B4EJM2 Two-component regulatory system, response regula... 117 3e-25 UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytopha... 117 3e-25 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 117 3e-25 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 117 3e-25 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 117 3e-25 UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa... 117 3e-25 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 117 4e-25 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 117 4e-25 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 117 4e-25 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 116 4e-25 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 116 5e-25 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 116 5e-25 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 116 5e-25 UniRef50_C1D480 Putative transcriptional regulator, LuxR family,... 116 5e-25 UniRef50_Q04VJ6 Receiver component of a two-component response r... 116 6e-25 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 116 6e-25 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 115 7e-25 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 115 7e-25 UniRef50_A7NQF6 Two component transcriptional regulator, LuxR fa... 115 8e-25 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 115 8e-25 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 115 8e-25 UniRef50_Q1IV27 Two component transcriptional regulator, LuxR fa... 115 8e-25 UniRef50_C4RI73 Two-component system response regulator n=6 Tax=... 115 9e-25 UniRef50_B9XH34 Two component transcriptional regulator, LuxR fa... 115 9e-25 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 115 9e-25 UniRef50_D1BTX1 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_A4JJ97 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 115 1e-24 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 115 1e-24 UniRef50_C5SMW9 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_B9XAI5 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 114 2e-24 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 114 2e-24 UniRef50_Q4V0G8 Two-component system regulatory protein n=4 Tax=... 114 2e-24 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 114 2e-24 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_Q21KE6 Transcriptional regulator, XRE family n=2 Tax=Pr... 114 2e-24 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 114 2e-24 UniRef50_D1BK57 Response regulator containing a CheY-like receiv... 114 2e-24 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 114 3e-24 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_A0PL56 Nitrate/nitrite response regulator protein NarL ... 114 3e-24 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_C4RQT0 LuxR family two-component system transcriptional... 114 3e-24 UniRef50_P96686 Transcriptional regulatory protein ydfI n=5 Tax=... 114 3e-24 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 113 3e-24 UniRef50_Q3SFT3 Two Component Transcriptional Regulator, LuxR fa... 113 4e-24 UniRef50_Q1J2K9 Two component transcriptional regulator, LuxR fa... 113 4e-24 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 113 4e-24 UniRef50_Q1IK52 Two component transcriptional regulator, LuxR fa... 113 4e-24 UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodoba... 113 4e-24 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 113 4e-24 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 113 4e-24 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 113 5e-24 UniRef50_A2SD01 Two-component response regulator n=3 Tax=Betapro... 113 5e-24 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 113 5e-24 UniRef50_A3Y699 Putative two component system response regulator... 113 5e-24 UniRef50_D1SF65 Two component transcriptional regulator, LuxR fa... 113 5e-24 UniRef50_C5T0X1 Two component transcriptional regulator, LuxR fa... 113 5e-24 UniRef50_B1Y7F6 Two component transcriptional regulator, LuxR fa... 113 5e-24 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 113 6e-24 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 112 6e-24 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 112 6e-24 UniRef50_A9B192 Two component transcriptional regulator, LuxR fa... 112 7e-24 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL Sbjct: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI Sbjct: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI Sbjct: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ Sbjct: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 145/215 (67%), Positives = 171/215 (79%), Gaps = 5/215 (2%) Query: 2 PEAT--PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 P +T PF+VMIVDDHPLMRRGVRQLLELD VVAEA +G+ AI LA R D+ILLD Sbjct: 4 PTSTTAPFRVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLD 63 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 LNMKG+SGLDTL ALR +G+ A+IIILTVSDA SDV+AL+DAGAD YLLKDS+PE LL Sbjct: 64 LNMKGLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQ 123 Query: 120 IRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 IR A+G VFSE V+ YL R DP + LTERELDVL E+ +G+SNKQIA+ L+ Sbjct: 124 IRQAAEGRSVFSESVSAYLSTRSEIA---DPLADLTERELDVLQEVVRGMSNKQIAAQLH 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ISE+TVKVHIRNLLRKLNVRSRVAAT+L+L+ + + Sbjct: 181 ISEETVKVHIRNLLRKLNVRSRVAATVLYLEYKNS 215 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 121/205 (59%), Positives = 157/205 (76%), Gaps = 3/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+++DDHPLMRRG++QL+ELD EVVA+ G I +A + DVI+LDLNMKG+S Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GLDTL LR +GV A+I+ILTVSDA +D++ LIDAGADGYLLKD++P+ LLE I+ A+G Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + S+ + L ER E++P LT+RE+ VL ++A GLSNKQIA+ L ISE+TVK Sbjct: 125 EVILSDSIKNLLLERT---HEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVK 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 VHIRNLLRKLNV SRVAAT+LF +Q Sbjct: 182 VHIRNLLRKLNVHSRVAATVLFFEQ 206 >UniRef50_B4EY67 Nitrate/nitrite response regulator n=9 Tax=Enterobacteriaceae RepID=B4EY67_PROMH Length = 207 Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 158/212 (74%), Gaps = 6/212 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP + +MIVDDHP+MR G+R LLE D VV+E+G+ AI A +L+ D+I++DL Sbjct: 1 MPS---YSIMIVDDHPIMRYGLRLLLEQDKEFIVVSESGNAQEAITTAKQLNPDLIMMDL 57 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +++G SG+D + +LRR G+T+ +++L++SD+ +DV+A +DAGA+GYLLK+ + ++LL ++ Sbjct: 58 HLQGRSGIDIIRSLRRCGLTSYVLVLSISDSRNDVYAALDAGANGYLLKECELDMLLLSL 117 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R G V+SE+V QY++ R+ + DP S LT+RELDVL E+A G+ NKQIA L I Sbjct: 118 RKAVVGRPVYSEKVWQYIQLRQNYS---DPLSALTKRELDVLQEVAVGMKNKQIAENLFI 174 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 SE+TVKVHIRN+L+KL V SR+AA+++ ++ + Sbjct: 175 SEETVKVHIRNILKKLQVTSRLAASLILIKHQ 206 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 101/208 (48%), Positives = 141/208 (67%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +VMI+DDHPLMR+G+ QLL LD E+V EA G ++ AN+ +D+ILLD NM+ Sbjct: 2 SNAIRVMIIDDHPLMRKGIAQLLSLDSKFEIVVEAKSGEEGLEFANQYQLDLILLDFNMQ 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+SGL+TL LR G +IIILTVSD DV A+I+ GA+GY LKDSD +LL I Sbjct: 62 GISGLETLKRLRSQGHLTKIIILTVSDNKQDVIAMINHGANGYFLKDSDASLLLSNINKV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G V S+ + +YL + + + + LT+RE +L E+A+G SNK+I+ L+ISE Sbjct: 122 LAGELVLSDDLIKYLNDLDEEDNIREKLNNLTKRERQILQEIAKGQSNKEISINLHISEG 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVKVH+++LL+KL +SRV A I++LQQ Sbjct: 182 TVKVHVKSLLKKLQAKSRVEAAIVYLQQ 209 >UniRef50_B2JVP2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVP2_BURP8 Length = 215 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 139/212 (65%), Gaps = 4/212 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V+++DDH L R+GV QL++++P EV EA G I++A RL DV+L+DLNM M Sbjct: 3 PHTVLLIDDHALFRKGVAQLIQMNPSFEVTGEATSGQDGIEMAVRLKPDVVLIDLNMPRM 62 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++TL +R+ GV A+ I+LTVSD DV A + AGA GYLLKD DPE L +++ K Sbjct: 63 NGIETLEGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQKALK 122 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQ 183 G+ V SE V L + G + P + LT REL+V L GL NK IA L+IS Sbjct: 123 GTAVLSESVTGSLVH-ALSGGQRIPAAQNDLTARELEVFDYLVAGLCNKAIARKLDISVG 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 TVKVH++++LRKL++ SR+ A +L+ Q+ G++ Sbjct: 182 TVKVHVKHVLRKLDLHSRLEA-VLWQQEHGSR 212 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 131/207 (63%), Gaps = 7/207 (3%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+++DDH L R+GV QL++++P VV EA G +DLA RL DV+L+DLNM M+G+ Sbjct: 7 VLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMPDMNGI 66 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 +TL +R+ GV A+ ++LTVSD DV A + AGA GYLLKD +PE L ++ +G+ Sbjct: 67 ETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKALQGTA 126 Query: 129 VFSERVN----QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 V SE V L + A + SV RE +VL L +G+ NK+IA L+IS T Sbjct: 127 VLSEAVTGKLFHALSAGQPLPANQSNLSV---REQEVLDYLVEGMCNKEIARKLDISVGT 183 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VKVH+++LL KL++ SRV A + +Q Sbjct: 184 VKVHVKHLLHKLDLHSRVEAVVWHHEQ 210 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 136/214 (63%), Gaps = 7/214 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A+P +V ++DDH L R+GV Q++E DP VV EA G+ + LA L DV+L+DLNMK Sbjct: 21 ASPTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMK 80 Query: 64 GMSGLDTLNALRRD-GVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G++G++TL + + + A+ ++LTVSDA D+ + AGADGYLLKD +PE L +++ Sbjct: 81 GLNGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKK 140 Query: 123 GAKGSKV----FSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G V +E + Q L E A++D LT+RE ++L LA GL+NK IA L Sbjct: 141 VISGMTVIQDSLTEVLKQALLEPRTRKADDD--VALTDREQEILQCLADGLNNKTIARKL 198 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 IS+ TVKVHI++LL KL + SR+ A + +++ Sbjct: 199 GISDTTVKVHIKHLLSKLKLTSRLEAAVWAHRKK 232 >UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator NARL n=16 Tax=Proteobacteria RepID=Q5P3L2_AZOSE Length = 220 Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 140/214 (65%), Gaps = 7/214 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP V+I+DDHPL R+G+ QLL PG +VAEA DG I L D++LLDLNMK Sbjct: 7 TPQSVVIIDDHPLFRKGLIQLLRTVPGFRLVAEAADGKEGIAHILHLRPDLLLLDLNMKD 66 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 MSGL+ L +R+ + +++++TVSDA+ D+ A + AGADGYLLKD +PE ++EA++A A Sbjct: 67 MSGLEVLKFVRQADLDTRVVMVTVSDAAEDLVAALRAGADGYLLKDMEPEQMVEALQAAA 126 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIASVLNI 180 G V S+ + + E+ P SV LTE+E +L +A GLSNK IA L I Sbjct: 127 AGRIVVSDALTHLM--AAALRQEKRPDSVTDAGLTEQEQRILERIAAGLSNKLIARELGI 184 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFL-QQRG 213 +E TVKVH++++LRKLN RSRV A + + QRG Sbjct: 185 AEGTVKVHVKHVLRKLNFRSRVEAAVWAVANQRG 218 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 125/200 (62%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDHPL+R G+R++LE + G +VV E GDG AI+++ LD D++L+DLNM G++ Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ +RR+ T I++LTV D+ VF ++ G GYLLKD DP+ L+++IR G Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + S V L + + + L++REL +L + +G SN++I L ISE+TVK Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 187 VHIRNLLRKLNVRSRVAATI 206 H+ ++ RKL V R A + Sbjct: 182 NHLSSIFRKLAVEDRTQAAL 201 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 91/218 (41%), Positives = 128/218 (58%), Gaps = 11/218 (5%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +P ++IVDDHPL R G+R LE +P +V EA DG+ A+ LA+ L DVIL+DL++ G Sbjct: 2 SPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPG 61 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M+GL+ AL+R A +IILT+ +F I AGA Y KD +PE L++ I A Sbjct: 62 MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVA 121 Query: 125 KGSKVFSERV-----------NQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQ 173 +G + +E V +Q+ + FS LT RE+++L +A+G SNK+ Sbjct: 122 RGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKE 181 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IA LNIS+QTVK HI ++LRKL V R A I L+ Sbjct: 182 IAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRH 219 >UniRef50_A5WD77 Two component transcriptional regulator, LuxR family n=3 Tax=Moraxellaceae RepID=A5WD77_PSYWF Length = 219 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 124/199 (62%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +P ++++VDDHP++RRG+ LL L+P +VVA+ G A+ + +D+++LD NM Sbjct: 9 TSPAKILLVDDHPMLRRGMADLLSLEPDFQVVADVSSGEEALSYLAQNQVDLVILDQNMP 68 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+SGLDT +R G A++++ TVSD+ D+ + G +GYLLKD PE + IR Sbjct: 69 GLSGLDTAEQIREQGHQAKVLMFTVSDSGDDIHNALKLGVNGYLLKDMQPEQVALDIRKA 128 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 +G V S R+ L + +D S LT REL V+ +A+G SNK I + L ISE Sbjct: 129 LRGELVVSSRLAAVLAQALRTPNLDDIVSNLTSRELQVVKMIAKGHSNKMIGNELGISES 188 Query: 184 TVKVHIRNLLRKLNVRSRV 202 TVKVH++++L K N+R+RV Sbjct: 189 TVKVHVKHILNKTNLRTRV 207 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 122/204 (59%), Gaps = 2/204 (0%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +++P +++IVDDHP++R G+R + + + G EVV EA DGA A+ A DV+L+DL M Sbjct: 8 DSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRM 67 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G++ + LR + ++++LT D SDV I+AGA GYLLKD+ E L+ A+RA Sbjct: 68 PTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRA 127 Query: 123 GAKGSKVFSERVNQYL--REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G V + V Q L R + P LTEREL+VL +A G +N++ A L I Sbjct: 128 AAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFI 187 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAA 204 SE TVK H+ + K VR R AA Sbjct: 188 SEATVKTHLLHAYAKFGVRDRAAA 211 >UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL n=64 Tax=Bacteria RepID=NARL_ECO57 Length = 216 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 2/214 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M P ++++DDHP++R GV+QL+ + P VV EA +G I+LA LD D+ILLDL Sbjct: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM GM+GL+TL+ LR ++ +I++ +VS+ DV + GADGYLLKD +PE LL+A+ Sbjct: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 Query: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A G V SE + L R E + LT RE D+L +AQGL NK IA L Sbjct: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +I+E TVKVH++++L+K+ ++SRV A + Q+R Sbjct: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 124/201 (61%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDDHPL+R G+R LLE G+EVV EAGDG AI L L+ DV+++DL M G+ Sbjct: 18 PIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGV 77 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L +++LT+S+ + VFA + AGA GY+LK +D + A+RA A+ Sbjct: 78 TGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVAR 137 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G V+ V + +R G E PF LT+RE ++L LA G SN +IA L +S++TV Sbjct: 138 GEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTV 197 Query: 186 KVHIRNLLRKLNVRSRVAATI 206 K H+ ++ KL V R A + Sbjct: 198 KNHLTSIFAKLQVADRTQAVV 218 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDHP MR G+ L+ PG +VVAEA DG AI++ + L DV+L+DL M GM Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + A+R+ A++I+L+ D D+ + +GA YLLKD E + +RA G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V + L ER LTERE DVL L +G SNK+IAS L ISE TVK Sbjct: 140 DTSLPRSVAERLTERAQ-------REQLTERERDVLESLIKGRSNKEIASSLCISEDTVK 192 Query: 187 VHIRNLLRKLNVRSRVAATI 206 H++ L KL VR R A I Sbjct: 193 SHLKTLFAKLRVRDRTGAAI 212 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 131/208 (62%), Gaps = 4/208 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++VDD L RRG+ LL + G EVV EAGDG +LA DV+LLD+ M SG+ Sbjct: 1 MLVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + A++ +A+II+LTVSD +D++ + +GA GYLLKDS E + +A+R A G Sbjct: 61 EACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 129 VFSERVNQYLRE--REMFGAEED--PFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + S + L + ++M E D P LTEREL+VL +A+G++N++IA L ISE T Sbjct: 121 LISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQR 212 VK H+RN+L KL + SR+ A + ++++ Sbjct: 181 VKNHVRNILEKLQLHSRMEAVMYAVKEK 208 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 3/206 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DDH L+R G+ +LLEL +VV EAGDG + D++LLDLNM M Sbjct: 3 PTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRM 62 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + ++ +++ILT+ D V+ +I +GA+GY+ KD PE L AI K Sbjct: 63 GGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIK 122 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G KVF +RE E+ L+ RE +VL LAQG+SNKQIA L ISE+TV Sbjct: 123 GDKVFPRSTENEVRE---VVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTV 179 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H+ N+LRKL+V R A I+ L++ Sbjct: 180 KNHVSNILRKLSVNDRTQAVIVALKR 205 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 87/205 (42%), Positives = 122/205 (59%), Gaps = 7/205 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDH ++R+G+ LL PG EV+AEAGDG AI L D+ ++DL + M+ Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + +R + A+I++LT D D++ + AGA GYLLK D + L AIR+ G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V + L ER M G+E LT RELDVL + QG SN++IA+ L+ISE TVK Sbjct: 130 KSRIPTVVAERLAER-MSGSE------LTARELDVLRLIVQGRSNREIAADLHISEATVK 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 HI NLL KL V R A LQ+ Sbjct: 183 THINNLLSKLGVSDRTQAATTALQR 207 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 130/211 (61%), Gaps = 6/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +++VDDHP++R+G R+LLE + VV EA G AI A +L DVIL+D++M GM Sbjct: 14 PITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGM 73 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ A++ + I++LT D + VFAL++AGA GYLLK++ + LL A+RA A Sbjct: 74 NGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAA 133 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFS---VLTERELDVLHELAQGLSNKQIASVLNISE 182 G V + + ER F + P L+ REL+VL A G +NK+IA L+IS Sbjct: 134 GESALHPAVARKVLER--FSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +TV+VH+ N+ KL V SR A +L+ +RG Sbjct: 192 RTVQVHLANIFSKLGVGSRTEA-VLYGIKRG 221 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 126/208 (60%), Gaps = 5/208 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+++DDH L R G+++LL+ G + V GDG + IDLA L DVILLD+ M M+G Sbjct: 4 RVLLIDDHTLFREGLQELLKRH-GIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ L LR+ G+ I++LT S D+ + GA GYLLK+ +P L++A+ +G Sbjct: 63 LEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 128 KVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 V + + Q L + + E PF LT RE ++L LA+G SNK IA L IS+ Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK+H++ +LRKL V SRV A +L +QQ Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLAVQQ 210 >UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Protease production enhancerprotein) n=83 Tax=Betaproteobacteria RepID=C4KQQ0_BURPS Length = 233 Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 88/224 (39%), Positives = 129/224 (57%), Gaps = 19/224 (8%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+++DDH L R GV+ LL+ P EVV EA DG + A + DVILLDLNM G+S Sbjct: 3 IRVLLIDDHTLFRSGVKLLLQRQPDFEVVDEASDGVEGVKRAKQHQPDVILLDLNMPGLS 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+TL L +D +A ++ILTVS+ + ++ + GA G+L+K+ D E L+ IR A G Sbjct: 63 GLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAG 122 Query: 127 SKVFSERVNQY----LREREMFGAEE-------------DPFSVLTERELDVLHELAQGL 169 V +E + LR DP LT RE D++ LA+G Sbjct: 123 EPVIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDP-DQLTPREHDIVRALARGA 181 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 SNK+IA +++E TVK+H++N+L+KLN+ SRV + + +RG Sbjct: 182 SNKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAV-YAVERG 224 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 5/203 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH L RRGV +L PG VV EAG+G AI+ L DV LLD++M + Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+T +R +I++LTVS+ +F + +GA GY+LK PE L+E +R +G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 127 SKVFS-----ERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 V + + ++ R E + + LTERE +VL L+ G SNK+IA L IS Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 182 EQTVKVHIRNLLRKLNVRSRVAA 204 E TV+ H+R++L KL++ +R A Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQA 212 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 126/216 (58%), Gaps = 16/216 (7%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Q++I+DDH L R GV+++L ++P EVVA+ DG +A++L + + DVIL+D+NM ++ Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L + ++++L++ D S V ++ GA GYLLK+ D + L+EA++ A+G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 127 S-----KVFSERVNQYLR-------EREMFGAEE----DPFSVLTERELDVLHELAQGLS 170 KV + +Y R E G +E P +LT RE +VL + G S Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 N+ I L ISE+TVK H+ N+L+K+NV R A + Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVV 225 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DDH L RRG+ +L +P ++VAEA DGA A+ A DV+LLD+ M Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKR 145 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ A++ +A+II+LT+SD +D++ I AGA GYLLK+ + + AIRA Sbjct: 146 TGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHG 205 Query: 126 GSKVFSERV-NQYLREREMFGAEED-----PFSVLTERELDVLHELAQGLSNKQIASVLN 179 G + S + ++ L E D P LTERE++VL +A+GL+N+ IA L Sbjct: 206 GQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLF 265 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 ISE TVK H+RN+L KL + SR+ A + ++++ Sbjct: 266 ISENTVKNHVRNILEKLQLHSRMEAVVYAVREK 298 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 7/213 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A V++VDDH L R+ +R LLE +P V+ EAGDG SA LA R DVIL+D++M Sbjct: 20 AKAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMP 79 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ G+ L+ +IIILT+ V I AGAD YLLK+S+ +++AIRA Sbjct: 80 GVDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAV 139 Query: 124 AKGSKVF-----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A+G V ++ +N++ R E EE+ + LTERE+ +L +A G+SNK+IA+ L Sbjct: 140 ARGESVIEPQLATKLLNEFRRISEF--REEETVAGLTEREIQLLRLVASGMSNKEIAAEL 197 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +++E TVK + L KL+V+ R A I L Sbjct: 198 SLAESTVKNRLSLLFEKLDVKDRTQAAIYALSH 230 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +++I DDH ++R G+ L+ +P EVVAEA DGA A++L + + D+ L+DL Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M SG+ +R TA +++LT D D+ + AGA GY+LK S E L+ A+ Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G + + V L R + F L+ RE+ VL ELA+GL+NK+IA VLNI Sbjct: 121 RAVAAGQRWIPKEVANRLALR-------NSFEQLSPREVQVLSELARGLANKEIADVLNI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E T K H++++L KL V R A + LQ+ Sbjct: 174 TEHTTKDHLKSILAKLRVADRTEAVTVALQR 204 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/231 (38%), Positives = 125/231 (54%), Gaps = 29/231 (12%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP +V++VDD PL+R G R +LE + +V EA DGA AI +D DV+L+D+ M Sbjct: 5 TPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDVRMPV 64 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G++ A+ G A++IILT D FA + AGA +LLKD P L+ A+R A Sbjct: 65 LDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVA 124 Query: 125 KGSKVFSERVNQ-----YLRE---------------------REMFGAEE--DP-FSVLT 155 G V + RV + Y+RE R G E+ DP LT Sbjct: 125 SGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALT 184 Query: 156 ERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 RE+++L +A+GLSN +IA +SE TVK H+R +L KL++R RV A + Sbjct: 185 PREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVV 235 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 10/207 (4%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V + DD PL+R G R ++ V EAGDG I LA + DVIL+D+ M SG Sbjct: 7 RVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCSG 66 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ + +I+ILT D VF I AGA GYLLKD+ PE L++AIRA A+G Sbjct: 67 IEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARGE 126 Query: 128 KVF-----SERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 +F ++ +++ R ++ AEE +PF T+REL+VL ++A GL N+ IA L + Sbjct: 127 AIFRTVTAAKIISETFRAKQQTHAEELAEPF---TKRELEVLQQMAYGLRNEDIAEKLFV 183 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATIL 207 SE TVK H+ +L+K N + R A + Sbjct: 184 SESTVKTHVHRILQKCNAQDRTQAVVF 210 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 126/216 (58%), Gaps = 13/216 (6%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++++DDH L R G++++L+ + EVVAE DG A+ L R DV+++D+NM ++G Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ L ++IIL++ D S V + GA GYLLK+ D + L+EA+R A+G Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 128 -----KVFSERVNQYLR--EREMFGAEED------PFSVLTERELDVLHELAQGLSNKQI 174 KV V +Y R E G E+ P+ +LT RE +VL LA G SNK I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 A L ISE+TVK H+ N+L+KLNV R A ++ ++ Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIK 253 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 126/203 (62%), Gaps = 6/203 (2%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+I DDH L+R+G++Q++EL+P +V+ A DG A+ +L DV+LLD++M +G+ Sbjct: 13 VLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQNGI 72 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 TL L+ T +II+LT + +F I+ GA+GY+LKD++ E L++AIR +G Sbjct: 73 QTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQGLN 132 Query: 129 VF-----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 +E V ++ R RE+ + + LT RE +VL LA+G++NK+I L ISE+ Sbjct: 133 YIYPTLATELVKEFNR-REVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISEK 191 Query: 184 TVKVHIRNLLRKLNVRSRVAATI 206 TVK H+ N+ +K+NV R A I Sbjct: 192 TVKNHVSNIFKKINVNDRTQAAI 214 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +A +V+I DDH + R+G+ ++ DP +VVA+A +G I L DV L+DL Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G+ ++A+ +A+II+LT D+ D++ + AGA GYLLK+++P+ LL AI Sbjct: 61 RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R +G K V L +R + E L+EREL+VL LAQG+SN IA L+I Sbjct: 121 RTVHRGHKYIPPDVGAKLVQR-LSNPE------LSERELEVLRSLAQGMSNADIADALSI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK H+ +L KL+V R A I+ +++ Sbjct: 174 GEGTVKSHVNRILNKLDVSDRTQAVIVAVKR 204 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++ ++++ DDHP++ + + L+ + V+ AGDG A++L ++ DV L+DL Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G D + A+ A+I++LT D D++ + AGA GYLLK ++P LL+AI Sbjct: 63 RMPKMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R KG K + L ER +EE L++REL+VL +A+G +N+QI++VLNI Sbjct: 123 RTVHKGQKYIPPTIAAKLAER--MSSEE-----LSDRELEVLRLIAKGKNNQQISNVLNI 175 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E TV+ H N+ KLNV R A + L + Sbjct: 176 AESTVRFHTNNIFGKLNVSDRTQALVTALNR 206 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 12/217 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I+DDHPL R+G+R LE EVV EA +G AI LA RL DV+L+D+N+ G++ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ ++R +I+++V + +F I GA Y KD P L+ IR A+G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 127 SKVFSERV-------NQYLREREMFGAEEDP-----FSVLTERELDVLHELAQGLSNKQI 174 + ++ V + L + A ED F+ LT RE+++L +A+GLSNK+I Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 AS L+IS QTVK HI ++L KL V R A I +Q+ Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQR 221 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 116/202 (57%), Gaps = 2/202 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH L R G+RQL+E DP EVV EA +G A+ + L DV+L+D+NM GM Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ A+ + +++LT+ D V I AGA YL+K+S PE LL AI A+G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 127 SKVFSERVNQYL-RERE-MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + L RE + + L++REL +L LAQG +N+QIA LN++E T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 185 VKVHIRNLLRKLNVRSRVAATI 206 VK ++ L +KL VR R A I Sbjct: 208 VKNNLSALFQKLGVRDRTQAVI 229 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 QV +VDDHP + +G++ L G E+V +G+G AI +L+ +V ++DL + G++ Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ ++IIL+ + +V IDAGA Y++KDS PE L+EAI+A +G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 127 SKVFSERVNQYLREREM-FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V + V + + +R G + +P LT RE +VL L +G SN+ IA L ISE TV Sbjct: 122 EPVLTPGVAKKIMKRAARKGRKTEP---LTPREKEVLACLVRGNSNRDIAKTLCISETTV 178 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H+ N+L+KL+V+ R A I ++ Sbjct: 179 KTHVSNILKKLDVKDRTQAVIKAIEN 204 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 115/201 (57%), Gaps = 5/201 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DDHP++R+G++ L++ P VVAEA DG A+ L + DV+LLDLNM G Sbjct: 4 PIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGS 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G L L A++I+LT + V + AGA G+L KD DP+ L +AIR+ A Sbjct: 64 DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVAD 123 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G +F+ M P + LT RE +VL +A G SN++IA L+++E+TV Sbjct: 124 GQVIFAREAVT-----AMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 186 KVHIRNLLRKLNVRSRVAATI 206 K H+ +L RKL V R A + Sbjct: 179 KTHLSSLFRKLGVADRTQAAL 199 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 6/205 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++VDDH L+R G+R LLE P VV EA DG A+ L DV+L+D+ M M+ Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L A+RR+ ++++LT D S V + AG G+LLKD + L +AIR A G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 127 SKVF----SERVNQYLRE-REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + +ERV + E + F E P LT REL+V+ +A+GLSN++IA+VL + Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEG-LTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATI 206 E TVK N+L KL VR R A + Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVL 205 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P ++M+ DDH ++R G+ L+L+P E+VAEA G AI DV LLD + M Sbjct: 5 PIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDM 64 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ ALR TA+I+IL+ + DVF + AGA+ YLLK++ ++ AIR Sbjct: 65 TGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHA 124 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 GS F ++ L R EE LT RE VL E+ +G SNK+I L I+E V Sbjct: 125 GSPYFPPEISAILAAR--MRREE-----LTPREKSVLFEIVKGSSNKEIGCCLEITESAV 177 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K+H+ +LL+KLN + R A + +Q+ Sbjct: 178 KIHVTHLLQKLNAKDRTHAATIAIQR 203 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 122/207 (58%), Gaps = 7/207 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP ++++VDDH LMRRG++ L L+P EV+ EA DG AI+L +L D+IL+D+++ Sbjct: 8 TPIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPL 67 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G+ ++RD +I+ L+ D + V ++ +GADGY LK+ + E LL IR + Sbjct: 68 LDGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLIS 127 Query: 125 KGSKVFSERVNQ---YLREREMFGAEEDP----FSVLTERELDVLHELAQGLSNKQIASV 177 G R+ +L + F E + +VL+ERE +L +A+G SNK+IA Sbjct: 128 HGGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQ 187 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAA 204 L +S T+K ++R LL KL+V RV A Sbjct: 188 LFLSPGTIKSYVRMLLNKLSVDDRVQA 214 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 127/215 (59%), Gaps = 8/215 (3%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++I DDH + R G+R+LLE +P +V+ EA DG A+ A RL DV+LLDL M + G Sbjct: 11 RILIADDHTIFRDGLRRLLESEPEFDVIGEAADGGEAVQQARRLGPDVLLLDLAMPRVPG 70 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 LD L L D + +IIILT + + + + AGA G +LK+S ++LL+ IR+ G Sbjct: 71 LDALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLLKGIRSVMAGQ 130 Query: 128 -KVFSERVN---QYLREREMFGAEEDPFSV---LTERELDVLHELAQGLSNKQIASVLNI 180 V E VN +YL+ GA+ D + LT+RE+++L + G +NK+IA N+ Sbjct: 131 YWVGRESVNDIVEYLKSTAA-GAQADSQAKNFGLTKREMEILGTIVAGFTNKEIAKKFNL 189 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SE TVK H+ N+ K+ V SR+ + + QR A+ Sbjct: 190 SEDTVKHHLTNIFDKVGVSSRLELALFAINQRLAE 224 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 119/208 (57%), Gaps = 7/208 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A ++++VDDH ++R G+ LL G +V+ +AGDGA+AIDL L DV++ DL M Sbjct: 3 AMTIRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMV 62 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G + + +R + A++I+LT D +VF + AGA YLLKD +P L++ + A Sbjct: 63 PMDGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAV 122 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G K + L AE LT R+L+VL LA+G SN +IA+ L ISE Sbjct: 123 YAGRKAIDPSIAAKL-------AEHVASDALTARQLEVLRSLAEGRSNIEIANTLYISEG 175 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK HI+ +L+KL R R A + +++ Sbjct: 176 TVKAHIKAILQKLGARDRTQAVTIGIKR 203 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 1/199 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++V+DH ++RRG+ L+ E+V EA +G A+ DV+L+DL+M M G Sbjct: 16 KLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMDG 75 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ +++ T +I+IL+ V ++AGADGY LK+ PE L+ +I A +G+ Sbjct: 76 IEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEGN 135 Query: 128 KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 F +V L R +E+PFS+LT+RE +VL E+A+G SNK+IA+ L+I+EQTVK Sbjct: 136 ANFHPKVTPALLGRSAV-KKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKT 194 Query: 188 HIRNLLRKLNVRSRVAATI 206 H+ N+L KL V R A + Sbjct: 195 HVSNILAKLEVDDRTQAAL 213 >UniRef50_A2SGF9 Two component transcriptional regulator, LuxR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGF9_METPP Length = 240 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 21/224 (9%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDDH L RRG+ LL D EVVAEAGD A + R+ DV+LLD ++ G+ Sbjct: 8 PIRVVVVDDHTLFRRGLVTLLAADGRFEVVAEAGDAGEAQGVVERMRPDVLLLDNHLPGV 67 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG+D L AL ++++LT+S+ +D+ A + GA GYLLK ++ + L +AI + Sbjct: 68 SGVDALPALLSAAPGMRVLMLTMSEDHADIVAALSRGAAGYLLKTAEIDELGDAIVSAIS 127 Query: 126 GSKVFSERVNQYLREREMFGAE---------------------EDPFSVLTERELDVLHE 164 GS S V L + A+ DP + L+ RE + L Sbjct: 128 GSASLSAPVALKLAAGAIATAQMAVSATEVHATPPSARDRAVPADPLAQLSARERETLAL 187 Query: 165 LAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +A+G SNK IA L I+E TVK+H++NLLRKL + SRV A + Sbjct: 188 VAEGCSNKLIARQLGIAEATVKIHVQNLLRKLGLESRVHAAAWY 231 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 3/210 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+I DDH L+R G+R +L+ DPG EVV EA +G +A+DLA + DV++LD+ M Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SGL LR ++++L++ D V + G GYLLKDS E L AIRA Sbjct: 70 SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHA 129 Query: 126 GSKVFSERVNQYLREREMF--GAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G FS V + L E+ GA +LT RE DVL +A+GL+NK IA+ L IS + Sbjct: 130 GGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRR 189 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 TV+ H +L+RKL + S VA F + G Sbjct: 190 TVEAHRESLMRKLQIHS-VAGLTRFALETG 218 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 3/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDHP++R G+ +L + E V +A DG A++L + DV+LLDL + +S Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + R + ++LT D + ++AGA GYLLKD+ PE + AIR+ +G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + + +R ED L++RELDVL L +G SNK IA LNISE T+K Sbjct: 122 GAALQSGIAARVLKRLATEPAEDE---LSQRELDVLQLLVRGESNKAIALSLNISENTIK 178 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ ++ KL+VRSR A + LQ+ Sbjct: 179 SHVSHIFSKLDVRSRAEAVAVALQR 203 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 8/205 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDHP++R G+ +L P ++ A GA A+ + +DV+LLDL M G++ Sbjct: 9 IRVLIVDDHPVVRAGLTSMLSTKPQLHMLPAASGGAEALTVLEEEQVDVVLLDLKMPGIN 68 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L+ L G + IIL+ + D++ I AGA GYL+KD+ E +LEAI A G Sbjct: 69 GIEVLHRLNNRGALPRTIILSSYEMDEDIYRAIQAGARGYLIKDTTQEEILEAIAAVHAG 128 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S + Q + ER G +E LT RE ++L LA+GL+NK+I V ISE T + Sbjct: 129 SLHLPRHIAQRISER--IGRQE-----LTRRETEILEMLAKGLTNKEIGRVFGISENTAR 181 Query: 187 VHIRNLLRKLNVRSRV-AATILFLQ 210 H+ ++++KL V R AAT L+ Sbjct: 182 NHVNSIIQKLEVSDRTEAATTAILR 206 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 120/204 (58%), Gaps = 7/204 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDH +R +R +LE + VV EA G ++ D IL+D+N+ G + Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ ++++ ++++ T+ + + + AGADGYLLKDS E ++ AIR +G Sbjct: 65 GIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRG 124 Query: 127 SKVFSERVNQ----YLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 V R+ + Y +++ + E+ LTERE ++L EL +GLSNK+IA L IS+ Sbjct: 125 DSVIHPRMTKKLITYHQQKMKVESNENE---LTEREKEILFELVKGLSNKEIAEALYISD 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATI 206 +TVK+HI + +KLNV+SR A I Sbjct: 182 KTVKIHINKIFKKLNVKSRSQAVI 205 >UniRef50_C3K8H7 Putative two-component system, response regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8H7_PSEFS Length = 219 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 118/196 (60%), Gaps = 2/196 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 ++++DDHPL R+G+ QL + EVV +A G I+LA L +LLDL+M G+SGL Sbjct: 6 LLLIDDHPLFRKGLAQLFDASGDFEVVGQAASGREGINLAVSLTPQQVLLDLHMPGLSGL 65 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 L+ LR+ + Q+++LT S +++ + GA GY+LK+++P+ LL +R KG+ Sbjct: 66 QVLDELRQLRLDCQVVVLTASPDRAELLTALRLGASGYVLKETEPDALLAYMRNCHKGAI 125 Query: 129 VFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V + L ++ DP LTERE L +A G+SNKQI L IS+ TVK Sbjct: 126 VLDSTLIALLADQAEPSPSCDPIDSGNLTEREGQTLALIAAGMSNKQIGRELGISDGTVK 185 Query: 187 VHIRNLLRKLNVRSRV 202 +++R+LL+KL + SR+ Sbjct: 186 IYVRSLLQKLGLHSRL 201 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +P +V +VDDH ++RRG+ L P VV EA +G SA+ +A+ DVI++D+ M G Sbjct: 2 SPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPG 61 Query: 65 -MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 + G++T L+R IIIL+ + V + AGA Y+ K+S PE LLEAIR Sbjct: 62 GIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGA 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G V + + Q + E + A + LTERE +VL +A+GL+N +IAS L +SE+ Sbjct: 122 MAGKAVLAPALMQRILEAQTSKAAD----TLTEREREVLKLVAEGLTNAEIASRLTVSEE 177 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+ ++LRKL + R A I L+ Sbjct: 178 TVKTHVASILRKLGLAHRTQAAIYALRH 205 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 2/206 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V++V+D PL R G+ +L P E+VAEA DG +A+ LANR ++LLD+ + G+ G Sbjct: 6 RVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGLDG 65 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 TL L+++ ++++LT + + V A++ AGADGY LK P+ LL IR + G+ Sbjct: 66 RQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAGN 125 Query: 128 KVFSERVNQYLREREMFGAEEDP--FSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 F +V +R E P + LTERE +VL +A+G SN +I L+IS TV Sbjct: 126 GWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGTV 185 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 +VH+ +LRKL R A +L L++ Sbjct: 186 RVHVHAILRKLGATDRTQAAVLALEK 211 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R+G+R LEL G EV EA DGA + A L+ DVILLDL M G+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + LR G TA+++++T + I AGA GY+ KD DP L A+R+ G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 127 SKVFSERVNQYLREREMFG-AEEDPFS-VLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + V L + G A++ P + LT RE +VL +AQG +N++IA L ++E+T Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H+ N+L KL V R A + ++ Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRH 214 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 126/218 (57%), Gaps = 15/218 (6%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DD L+R G R +L D G EVV EAGDG A+++A R DV+L+D+ M + Sbjct: 20 PLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKL 79 Query: 66 SGLDTLNALRR-------DGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 GL+ A RR D T ++IILT D +F + AGA G+LLK++ PE L+E Sbjct: 80 DGLE---ATRRLLGPAGADHPT-KVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIE 135 Query: 119 AIRAGAKGSKVFSERVNQYLREREMFGAEEDPF---SVLTERELDVLHELAQGLSNKQIA 175 ++R A+G + S V + + R A P S LT+RE +VL LA+G SN +IA Sbjct: 136 SVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIA 195 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 L + E TVK H+ +L KLN+R R A ++F + G Sbjct: 196 RQLVLGETTVKTHVSRILTKLNLRDRTHA-VVFAYENG 232 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+I DDH L+R G+R+LLELD +V+ E GDG AI++A + D+I++D+NM G G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 + ++R+ + +II LTV + +V ++ AGA Y+LKD L++ I G Sbjct: 65 IVATRVIKRELPSVRIIALTVYEG-EEVVDMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 128 KVFSERVNQYLREREMFGAEEDPFSV-LTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V RV L RE+ +E + LT+RE DVL L +G +NK++A V+ ISE+TVK Sbjct: 124 VVIYPRVANRL-VRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVK 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 H+ ++ RKL V+ R A I L+ R Sbjct: 183 NHLTSIFRKLGVKDRTHAAIYALKNR 208 >UniRef50_C5VFN2 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VFN2_9CORY Length = 216 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 7/208 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DD L+ R + +L P EVVA DG +A+D +D+IL+D+ M + Sbjct: 3 VKILIADDQVLLSRALATILGSQPDLEVVATVHDGQAAVDTVAHTPVDLILMDVRMPKLD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L +R +I++LT + V A + AGA+G+LLKD+DPE L+E++R A G Sbjct: 63 GVAALKKIRAKPNPPKIVMLTTFNVPDTVKAALTAGANGFLLKDADPETLIESVRTVAAG 122 Query: 127 SKVF-SERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIASVLN 179 V ++ V L A+ P S+LT RE++VLH + +G +N +IA+ L Sbjct: 123 QTVLAADVVGHILPGALTVAADTLPSHVQQGLSLLTPREMEVLHAIGEGKTNAEIAAELV 182 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATIL 207 IS TVK H+ NLL K++ R RVA I+ Sbjct: 183 ISATTVKTHVSNLLAKVHARDRVALAII 210 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 126/202 (62%), Gaps = 5/202 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH ++R+GV +L + EV+ EA +G A++L +L D++L+D+NM + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLS-NTDLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L++ +++ILTVS+ D+F I AGADGYLLK+ PE L+ ++RA G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 127 ----SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 S V + ++ + R+ + P L+ RE++VL + GL+ K+IA+ L ++E Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 183 QTVKVHIRNLLRKLNVRSRVAA 204 TVK H+R++L KL++R+R A Sbjct: 180 STVKNHMRHILEKLHLRNRSEA 201 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 118/201 (58%), Gaps = 1/201 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+++DDH ++R G+ LE P EV+ EA DG+ + LA L DVIL+DL M+GM Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + R+ +II+LT V+ +I+AGA YLLK S + +AIRA +KG Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 127 S-KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 K+ S+ + L G P LT+REL++L +A+G +NK+I L I+ +TV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATI 206 K HI N+L KL+V R A + Sbjct: 182 KTHITNILSKLDVSDRTQAAV 202 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 3/211 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +MI DDH ++R G++ LLELD +V+AEA +G +D DV+LLD+NM M+ Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L AL+ ++++LTV + + + +D G +GY+LKDS+ L +AI A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQT 184 + L + M ED + LT+RE++VL E+A G N+ IA + ISE+T Sbjct: 123 ETYIQPSLIPALNSK-MIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERT 181 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 VK HI ++ +KL V R A + ++ Q Sbjct: 182 VKNHISSIFKKLEVTDRTQAAVFAIRNNIIQ 212 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 14/220 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD LMR G+R LL +++AEA +GA AI+LA L D+IL+D+ M M Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ AL + +++ILT V + +GA GY+LKD+ PE L+ A+RA A G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 127 SKVFSERVNQYLREREMFGAE--------------EDPFSVLTERELDVLHELAQGLSNK 172 ++ S + L R+ A DP LT RE ++ +AQG++N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 Q+A L +S TVK H+ + KL+V +RV +L ++R Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNERR 222 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 T +++I DDH L+R G+R++L ++P VV E +G A+D + +D++L+D+NM Sbjct: 3 TSIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPI 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M+G++ +++ II LT+ D +F LI G GY+LKD P+ L++ I A Sbjct: 63 MNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVA 122 Query: 125 KGSKV----FSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 +G + RV E LTERE++VL ++A+G SNK IA+ L I Sbjct: 123 QGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 SE+TVK H+ N+ +K+ V R A + ++++ Sbjct: 183 SEKTVKNHLTNIFQKIGVADRTQAALYAIKEK 214 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 125/219 (57%), Gaps = 13/219 (5%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++I DDH L+R G+R++LEL+P +VV EA G AI++ R VI++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM G++G++ +R++ I+ LT+ D + L+ +G GY+LKD E L++A+ Sbjct: 61 NMPGLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGA--EEDPFS------VLTERELDVLHELAQGLSNK 172 A+G++V V Q ++ G ++ PF+ LT RE ++L ++ G SN+ Sbjct: 121 YQVARGARVIHPGVAQ-----KVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNR 175 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +IA L ISE+TVK H+ ++ K+ V R A + L+ Sbjct: 176 EIARELFISEKTVKNHLTHIFHKIGVSDRTQAALYALKH 214 >UniRef50_Q0ZKD3 Putative uncharacterized protein n=1 Tax=Corynebacterium sp. L2-79-05 RepID=Q0ZKD3_9CORY Length = 221 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 6/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DD PL+R G+ +L+ DP EVVA+A DGA A+ + +DV L D+ M GM Sbjct: 7 PVRVLVADDDPLVRTGIVGILDTDPAIEVVAQAADGAEALRKIDAHRLDVALFDIQMPGM 66 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SGLD L LR DG + +T + I ADG++LK DP L+ + A A Sbjct: 67 SGLDALQRLRSDGSALPCLFVTTFGEDDYIAEAIRLDADGFVLKSGDPRQLIAGVHAVAG 126 Query: 126 GSKVFSERVNQYLREREM------FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 FS V + L + + + + + F LT RE ++L L+QG +N +IA L+ Sbjct: 127 RGAFFSPSVARRLLDSGVSTTYTQYASAVERFERLTAREREILIRLSQGETNAEIAKALH 186 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 ++ TVKVH+ +LRK R+RV A ++ L+ Sbjct: 187 LAPGTVKVHVSAILRKTEARNRVEAALIALR 217 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 7/199 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 T +V++VDDH L+RRG+ LL LD +VV EAG G +A+ L D+++LDLNM G Sbjct: 3 TRTRVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPG 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + GL+TL +R G+T ++++L++ D + V + AGADGYLLKDS + L AI + Sbjct: 63 IDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVL 122 Query: 125 KGSKVFSERVNQ-YLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 +G + + +++ L+E M P S LT RE +VL +A GL+ +A LNIS Sbjct: 123 RGQRYLAAAIDRARLQESRM-----RPVS-LTAREREVLQLIANGLTTSAVAEALNISPH 176 Query: 184 TVKVHIRNLLRKLNVRSRV 202 T H NL++KLNV ++V Sbjct: 177 TATRHRANLMQKLNVHNQV 195 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 8/214 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD PL+R G+ L+ L+P EVV EAGDG +A+ +A L D+ LD+ M G+ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLD 61 Query: 67 GLDTLNALRRDGVTAQI--IILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ L V A I ++LT D VF ++AG G+LLKD++PE + AIR A Sbjct: 62 GIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVA 121 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFS------VLTERELDVLHELAQGLSNKQIASVL 178 G+ + + + + + P S VLT RE ++L LAQG+SN +IA L Sbjct: 122 AGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 + TVK H+ +L KL VRSR+ A + Q R Sbjct: 182 VVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNR 215 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 116/209 (55%), Gaps = 2/209 (0%) Query: 5 TP--FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 TP +V++VDDH ++RRG+R LE+ EVV EA DG I A L DVIL+D+ M Sbjct: 4 TPGRVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKM 63 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G G++ L LR A+++I+T V + AGA GY+ KD DP+ L AIR+ Sbjct: 64 PGTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRS 123 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + V L ++ G LT+RE +VL +A G SN++IA L +SE Sbjct: 124 VHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSE 183 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +TVK H+ N+L KL+V R A + ++ Sbjct: 184 KTVKTHVSNILMKLDVADRTQAALWAVRH 212 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 8/211 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI------DVILLDL 60 +VM+VDDH ++RRG+R LE P +V+EA DG A+DL N + V+L+DL Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G++ ++ ++++LT + V A + AGA GY+LKD++PE + A+ Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA KG V + L R + + + LT RE D+L + QGLSN++IA L I Sbjct: 131 RAAVKGEVHLDAAVARLLARR--MASPQVGVTSLTARERDILVLVGQGLSNREIADRLVI 188 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 SE+T + H+ N+L KL + SR A +L +++ Sbjct: 189 SERTARTHVSNVLSKLQLSSRTQAALLAIRE 219 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 117/213 (54%), Gaps = 18/213 (8%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++ +VDD L+R G R +L+ P VV EA DG SA+D + DV+L+D+ M + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 LDTLNA-LRRD----GVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++ L RD G ++++LT D +A ++AGA G+LLKD+ PE LL AIRA Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 123 GAKGSKVFSERVNQYLREREM-----------FGAEEDPF--SVLTERELDVLHELAQGL 169 A G V + + L ER + AE+ + VLTERE +V +A GL Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRV 202 SN +IA L ++E T+K HI LL KL R RV Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRV 216 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 123/202 (60%), Gaps = 10/202 (4%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 ++IV+D LMR+G+R +L+L+ VV EA DGA + A RL D+IL+D+ M M+G+ Sbjct: 8 ILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMNGV 67 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + + A+ A+II+LT D VF + AGA GYLLKD+ E LL+ IR G + Sbjct: 68 EAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG-E 126 Query: 129 VF--SERVNQYLRE----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 VF E ++ LRE R G PF L+ERE +VL LAQGLSN++IA L+I+E Sbjct: 127 VFIQPEIASRTLREAATGRRRAGT--IPFD-LSEREREVLVLLAQGLSNREIAGRLSITE 183 Query: 183 QTVKVHIRNLLRKLNVRSRVAA 204 TVK H+ N+L KL +R A Sbjct: 184 GTVKNHVSNILAKLQAENRTQA 205 >UniRef50_C5CCY4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=5 Tax=Bacteria RepID=C5CCY4_MICLC Length = 209 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 122/200 (61%), Gaps = 8/200 (4%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDL--ANRLDIDVILLDLNM-KG 64 +VM+VDDHP++R GVR ++E P VVAEA DGA AI + A +DV+L+DL M G Sbjct: 4 RVMLVDDHPVVRAGVRAVVEAHPDLTVVAEAADGAEAIGVLEAGEPAVDVVLMDLQMGAG 63 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M G+ A+R Q++ILT D +D+ A ++AGA GYLLKD+ E + A+R A Sbjct: 64 MDGVTATRAVRERWPGVQVLILTTFDTEADILAAVNAGAAGYLLKDAPSEEIASAVRQAA 123 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G K + +V L R G+E VL+ERE+++L +A+G +NK A L ISE T Sbjct: 124 AGRKALAPQVAATLMGRMSGGSE-----VLSEREIELLELIARGATNKVAAKELFISEAT 178 Query: 185 VKVHIRNLLRKLNVRSRVAA 204 VK H+ ++ +KL V +R A Sbjct: 179 VKTHLVHIFQKLGVDNRTRA 198 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Q+++VDD PL+RR +R L EL VV EA +G A+ RL +IL+D+NM M Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L A++ + Q+IILTV + V I G Y+LKDS PE L+E + + A+G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 127 SKVFSERVNQYLREREMFGA--EEDP--FSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + L + G + P +LT RE +VL + GLSNK+IA LNI+ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +TVK H+ ++L KLNV R A +L +Q+ Q Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQ 220 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/210 (39%), Positives = 121/210 (57%), Gaps = 8/210 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH L R +R LLE G EVV EA G A++LA L DV+L+DL M GM Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + + ++++LT S+ D+F + +GA GY+ KD + E + A ++G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 127 SKVFSERVNQYLREREMFG----AEEDPFSVLTERELDVLHELAQGL-SNKQIASVLNIS 181 F+ + + L REM AE +P VLTERE ++L L QG+ SNK++A L +S Sbjct: 120 EPAFTPGLARKLL-REMSKPAGRAEREP-EVLTEREQEILELLVQGVTSNKELAERLILS 177 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK H+RN+L KL++++R LQ Sbjct: 178 ENTVKYHLRNILDKLHLQNRTQVVAYALQH 207 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 12/204 (5%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++VDDHPL RRG+ LL + G E+VAEA DG + LA D++LLD+ M M+G Sbjct: 7 RILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMNG 66 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 + L + +++LT+S+ + ++ ++ GA GY+LK++D + L+EAIR G Sbjct: 67 PEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAGQ 126 Query: 128 KVFSERVNQYLREREMFGAEEDP-----FSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + S +N G P LT+RE DVL +A G+SNK IA + +SE Sbjct: 127 QTVSPEMNNA-------GQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSE 179 Query: 183 QTVKVHIRNLLRKLNVRSRVAATI 206 TVK H++N+ RKLN+ +RV A + Sbjct: 180 NTVKAHMQNIFRKLNIDNRVRAAV 203 >UniRef50_D0WKH1 Nitrate/nitrite response regulator protein NarL n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKH1_9ACTO Length = 212 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 1/201 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++ DDHP++R G++ ++E +V+ EA GA A++L +L DV+LLDL M MS Sbjct: 2 ISIVMADDHPMIREGIKSMIEKYANLKVLGEASGGARALELVEKLRPDVLLLDLRMPDMS 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G D + +I+ILT+ D D+ A I+AGA GY+LKD +P L EAIRA A G Sbjct: 62 GSDVARKALQISPDTKILILTMYDTDRDILAAIEAGASGYVLKDIEPFRLAEAIRATASG 121 Query: 127 SKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V ER + + + G+ D L+E+E VL A+G++N+QIA+ L + TV Sbjct: 122 RTVLDERAARAVTQSVRGGSSADGGVEELSEQEKRVLALAAEGMTNRQIATALGVGAATV 181 Query: 186 KVHIRNLLRKLNVRSRVAATI 206 K + KL+V R +A + Sbjct: 182 KTYFSRAFAKLDVVDRTSAVV 202 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+++DDH L R G+++LLE G EVVA G+ ++ ++ DV+LLD+ M G++ Sbjct: 1 MRVLLIDDHALFRFGLQELLE-RRGIEVVAAVGESSTGLERVAETRPDVVLLDMRMPGLN 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L LR + I +LT S DV + +GA GYLLKD +P+ L+ A+ +G Sbjct: 60 GLELLRRLRAAHQSMPIAMLTTSAEERDVIDSLQSGAQGYLLKDMEPDALIAALGEIVQG 119 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV-------LTERELDVLHELAQGLSNKQIASVLN 179 V + + L R + G E P V LT RE ++L LA+G SNK IA L Sbjct: 120 RTVVASELTGVL-ARAVRG-ESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIARELG 177 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ISE TVK+H++ +LRKL+V SRV A ++ +++ Sbjct: 178 ISEGTVKLHVKAILRKLDVHSRVEAAVIAVER 209 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 112/207 (54%), Gaps = 6/207 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R GVR +L DP EVVAEAGDG AIDL DV+LLD+ M M Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + LRR +++LT + + GA G+LLK DP LL I A A+G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 127 SKVFSERVNQYLREREMFG------AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 + S RV + + G A + + LT RE DVL + +GLSN QIA L + Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATIL 207 E TVK H+ +L +L R+RV A IL Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAIL 208 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P A+P +V+I DD L+R G R L+E P VVAEA DG +A+ + RL DV+L+D+ Sbjct: 21 PPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIR 80 Query: 62 MKGMSGLDTLNALRRDGV--TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 M M+GL+ + D V I+++T D VF + AGA G++LKD+ PE LL A Sbjct: 81 MPVMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 IRAGAKGSKVFSERVNQYLRER--EMFGAEEDPF----SVLTERELDVLHELAQGLSNKQ 173 IR A G + + V + L + P S LT+RE VL ++A G SN + Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSR 201 IA L +S TVK H+ +LL KL R R Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDR 228 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 20/221 (9%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH L+R+G++++L + EVV EA DG A+ L D++LLD+NM G++ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GLD L++ +II LT+ D+ + V L+ GA GYLLKD +P VL++AI +G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 127 SKVFSERVNQYLREREMFGA---------------EEDPFSVLTERELDVLHELAQGLSN 171 + + L ER +FG +E LT RE+DVL +A+GLSN Sbjct: 123 NPFVYPK----LAER-LFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSN 177 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 + I L +SE+TVK H+ ++ KL V R A + L+ + Sbjct: 178 QDIGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNK 218 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 126/211 (59%), Gaps = 5/211 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH ++R+G+R LLE PG +V+ +A DG A+ LA DV+++D+ M G++ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + I+ L++ S V + AGA YLLKDS L+ A+ A ++G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 127 SKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 FS +++ L E M + ED + +LT RE +VL LA+G +NK++A++LN+S Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 TV+ H N+L+KLN+ S A IL+ ++G Sbjct: 184 YTVETHRGNILQKLNLHSG-AELILYAIRKG 213 >UniRef50_C4DCC2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCC2_9ACTO Length = 225 Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 6/207 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 + +IVDD L+R G+ LL+ +P VVA+A DG SA+ A R +DV L+D+ M GM Sbjct: 2 IRTLIVDDDALVRLGLCDLLDDEPDITVVAQAADGKSAVAQAERHRVDVALMDVRMPGMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ LR AQ+I LT D V+ +I AGA G+LLKD+DP ++ AIR A G Sbjct: 62 GIAATARLRALPEPAQVIALTTFDLDEYVYDMIAAGAAGFLLKDTDPGEIIRAIRVVAAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASVLNI 180 + + L ER A +V LT RE DVL LA G +N +IA+ L++ Sbjct: 122 DAMLHPAAARRLIERYHRAARPRATAVRHRVDRLTPRETDVLRHLALGATNAEIAASLSM 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATIL 207 E TVK H+ +L L+V +RV A + Sbjct: 182 RESTVKAHVTRILATLDVTNRVQAALC 208 >UniRef50_A1AXR1 Two component transcriptional regulator, LuxR family n=2 Tax=sulfur-oxidizing symbionts RepID=A1AXR1_RUTMC Length = 209 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 8/209 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLAN--RLDIDVILLDLNMKG 64 ++ I+DDH L R G+ LLE S+ ++ + + LA L +D+ILLDL M Sbjct: 1 MKIYIIDDHTLFRNGLIALLE----SKQISASAAASPEQGLAEIPSLSVDIILLDLRMPQ 56 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 MSGL+ L L+ +T I++LT S D+ + GA GYLLKD DP+ L++A+ Sbjct: 57 MSGLEVLKTLKEKNITTPIVMLTTSTQEYDLRNCLKHGAQGYLLKDMDPDELVDALNEVV 116 Query: 125 KGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 KGS V ++ + L + R+ E F LT RE +V +++ G SNK IA L IS+ Sbjct: 117 KGSIVVAQDMTYILAKALRDELTDNEPSFDSLTSREKEVACQVSSGYSNKVIARELGISD 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK+H++++L+KL++ SRV ++ Q+ Sbjct: 177 GTVKLHVKSILKKLSLSSRVEVAVMVTQK 205 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 6/200 (3%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+I DDHPL R+GV +L P +EV+AEAG G A+ +A L D++L+D+ M ++G Sbjct: 5 RVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLNG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ + III+T+ + + VF+ + AGA GY+LKD++ E +L A+RA AKG Sbjct: 65 IEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKGE 124 Query: 128 KVFS----ERVNQYLREREMFGA--EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +FS R+ Y + E+ F LT RE +VL L++G SN ++A L +S Sbjct: 125 VLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGLS 184 Query: 182 EQTVKVHIRNLLRKLNVRSR 201 +TV ++ N+L KL V R Sbjct: 185 NKTVYNYVANILNKLQVSDR 204 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 122/194 (62%), Gaps = 4/194 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDHPL R G+R L LD EV+AEA +G A+++ N++ +D++L D+NM M Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L ++ ++ ++++L++ D + A + GADGY+LKD + L+EAI+ A G Sbjct: 62 GMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + FS V L + G + +++T+RE VL ++ G++NK+IA +++S +TV+ Sbjct: 122 KRYFSADVINTLSQELASGKQ----ALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVE 177 Query: 187 VHIRNLLRKLNVRS 200 H RN+ +KL + S Sbjct: 178 THKRNIKQKLMIDS 191 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 16/218 (7%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP++ PF+V + DDHPL+R G+R L + + EA DG A++ + DV L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G+SG+ + LR+ ++IL+ + + AGADGY+LK D L + I Sbjct: 61 DMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLI 120 Query: 121 RAGAKGSKVFSER-----VNQYLREREMFGAEEDPF-------SVLTERELDVLHELAQG 168 RA + G S V+ + E+E EE P + LT RE +L LAQG Sbjct: 121 RAFSCGEHPMSPYLMDLAVDWHASEQE----EESPADKDDESDAFLTRREQQILSCLAQG 176 Query: 169 LSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 NK+I++ L IS +TVK HI+N+ +KL V+SR+ A I Sbjct: 177 QGNKEISNALFISTETVKTHIKNIFKKLEVKSRLEAVI 214 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 118/205 (57%), Gaps = 2/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+ VDDH ++R G+ L EVV E G AI A+ L D+IL+DL M+ M Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++D ++++LT +V+ +DAG D Y+LK + + + +A+R ++G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 VF V +R R AE + +LTERE+++L +A+G SN++IAS +I+ +TVK Sbjct: 123 ESVFEPEVLVKMRNRMKKRAE--LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ N+L KL V+ R A I Q Sbjct: 181 THVSNILSKLEVQDRTQAVIYAFQH 205 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP+ P ++++VDDH ++R G+ L L+ VV EAG+ A+ + DV+L+DL Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G +G LRR+ A++++ T D D++ + AGA GYLLK + E LL AI Sbjct: 61 RLPGANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G + S + Q L R A D +++RE +VL +A+G +NK+IA+ L I Sbjct: 121 RAVAAGERHLSAALAQRLAGRV---AAPD----VSDREREVLQLIARGKANKEIAAALGI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAAT 205 SE+TVK H NL K+ V R AT Sbjct: 174 SEETVKRHASNLFVKMGVADRAQAT 198 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 118/220 (53%), Gaps = 9/220 (4%) Query: 1 MPEATP---FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVIL 57 MP+ P V++VDD PL+R+G+R +L PG EVV EA DG SA+ A RL DV L Sbjct: 1 MPDGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTL 60 Query: 58 LDLNMKGMSGLDTLNALRR-DGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVL 116 +D+ M GM G++ + D +++LT+ D VF + AGA G +LKD+ L Sbjct: 61 MDVQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSEL 120 Query: 117 LEAIRAGAKGSKVFSERVN-----QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSN 171 + AI A A G + S V ++ R + D + LT RE DV L QGLS Sbjct: 121 VAAIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLST 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 + A L + + TVK H+++L RKL VR RV A I + Sbjct: 181 AEAAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEH 220 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 14/216 (6%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAID-----LANRLDIDV 55 M +VMIVDDH ++R G+R L L+P EVVAEAG G +AI L + L DV Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLP-DV 59 Query: 56 ILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEV 115 IL+DL M GM G++T L + +II+LT V+ I+AGA Y+LK E Sbjct: 60 ILMDLMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEE 119 Query: 116 LLEAIRAGAKGSKVFSERVNQY----LREREMFGAEEDPFSVLTERELDVLHELAQGLSN 171 L+ A+ KG V + V+Q LR+R +E+ LTERE +VL +A+G SN Sbjct: 120 LIYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEE----LTEREKEVLLLIAEGRSN 175 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 K+I L+IS +TVK H+ NLL K + R +L Sbjct: 176 KEIGEELHISVKTVKTHVSNLLMKCELEDRTQLAVL 211 >UniRef50_B5JLS2 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLS2_9BACT Length = 209 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 7/201 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +++VDDHP R G+R +L P EVVAEA +DL + DV LLDLN+K Sbjct: 4 PITLLVVDDHPAFRAGLRSMLSEAPNLEVVAEAASVQETLDLHQQHAPDVTLLDLNLKKE 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG+D + L ++I+L+ D S D+ AGA YLLKDS +++AI A Sbjct: 64 SGIDAITQLLAIKADTRVIVLSTFDMSEDIHLAFKAGARAYLLKDSSRSEIIQAIEAVYA 123 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G +V + Q L E+ A LT +EL++L + QG NK+IA+ L I+E TV Sbjct: 124 GERVIPPAIKQRLLEQRSRPA-------LTAKELEILELVVQGRRNKEIAADLGITEFTV 176 Query: 186 KVHIRNLLRKLNVRSRVAATI 206 K H++ + KL V R A I Sbjct: 177 KGHLKTVFLKLQVSDRTEAAI 197 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 +P +V+I DDHP+ R+G+R LLE G EVV EA G A+ LA L DV+++DL Sbjct: 4 LPGNEAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDL 62 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G +G++ + R +++LT+ VFA + AGA GYLLK+S E + A+ Sbjct: 63 HMPGGNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAV 122 Query: 121 RAGAKGSKVF----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 RA A G ++ + RV Y +M ++ F LTERE +VL +AQG SN +IA Sbjct: 123 RAVAAGEAIYGPEIARRVLTYF--ADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQ 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L +S +TV+ H+ N+ KL+V R A +L Sbjct: 181 TLFLSPKTVRNHVSNIFMKLHVADRAQAIVL 211 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 5/207 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDDH ++R+G+R L LD EVV EA +G A+ A RL DV+++DL M M Sbjct: 9 PVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVM 68 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ LRR ++I LT + V IDAGA GY+LKD+ + L +AI A A+ Sbjct: 69 DGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAAR 128 Query: 126 GS-KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G ++ E + +R+ E LT +E+ VL +A+G SN+ IA ++E T Sbjct: 129 GEVRLHPEAARRLVRDFRTPEMRE----TLTPKEVIVLQLIARGYSNRDIARDQGVTEAT 184 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H+ LL KL + SR A + L+ Sbjct: 185 VKTHVSRLLGKLGLESRTQAALYALRH 211 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 127/211 (60%), Gaps = 5/211 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH ++R G R+L++ + G VV EA DG A++++ ++ DV+++D+ M ++ Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRLN 66 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ T I+ILT ++ + A+++AGA +LLK+ LLEAIRA G Sbjct: 67 GIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYAG 126 Query: 127 SKVF----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 V + RV L + E + LT+RE++VL A+G+SNK IA L +S Sbjct: 127 ESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLSN 186 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +T++ H+ N+ +KL+V SR A IL+ +RG Sbjct: 187 RTIQTHLSNIFKKLSVGSRTEA-ILYGLKRG 216 >UniRef50_C7MI23 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcineae RepID=C7MI23_BRAFD Length = 238 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 20/227 (8%) Query: 2 PEA---TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILL 58 PEA P +V++ DDHP + G+ LL+ P VVA+AGDG +A+ A DV+L Sbjct: 17 PEAWASAPIRVLVADDHPAVLSGLVALLDSAPDLAVVAQAGDGETALAAAREHRPDVVLT 76 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M G +G++ ALR G A +++++ D V + AGADGYL+K DP+ +L Sbjct: 77 DVRMPGATGIEITPALRETG--AHVLVISGFDLDEYVLGALAAGADGYLVKTEDPQRILA 134 Query: 119 AIRAGAKGSKVFSERVNQY----LREREMFG--------AEEDPFSVLTERELDVLHELA 166 A+R +G V S + LR R E PF T RE DVL +A Sbjct: 135 AVRDVHRGDAVLSAAATRAVVAELRGRASGHPAAGRSAVGPEPPF---TRREEDVLALVA 191 Query: 167 QGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 QG +N+QIA L + TVK H+ + L KL + SRV A + + Q RG Sbjct: 192 QGRTNQQIARELFVEVTTVKSHLSHALVKLQLDSRVQAALWWQQHRG 238 >UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridiaceae RepID=A6TKJ8_ALKMQ Length = 205 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 111/204 (54%), Gaps = 11/204 (5%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++IVDDHPL+R+G+ +L L+ + EA + AID+ + ++ L+DLN+ G Sbjct: 2 RILIVDDHPLVRKGIASILFLEKDVHEIKEAENIEEAIDMMAKFSPEITLIDLNLGRQDG 61 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ +N R G+ + I+LT S D +AG DGY+LK++ E +L A+R +G Sbjct: 62 LEIVNKARAKGMATKFIVLTSSSKREDFLRAREAGVDGYILKEAFAEDILYALRIVLRGK 121 Query: 128 KVFSERVNQY----LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 K V QY +RE LT RE DVL EL +GLSN +I L ISE Sbjct: 122 KFIDPEVIQYQTSDIRENSHLDE-------LTPRERDVLTELGKGLSNFEIGKQLFISEH 174 Query: 184 TVKVHIRNLLRKLNVRSRVAATIL 207 TVK H+ N+L KL + R A + Sbjct: 175 TVKKHVSNILSKLELNHRTQAALF 198 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 123/217 (56%), Gaps = 18/217 (8%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLD-----IDVILLDLN 61 +V++VDDHP++R G+R +L PG VVAEA +G +A+ ++L +D++L+DL Sbjct: 4 IRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLMDLQ 63 Query: 62 MKGMSGLDTLNALRR------DGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEV 115 M SG+D + A + ++ILT D +D+ A ++AGA GY+LKD+ PE Sbjct: 64 MG--SGMDGVTATEKIKAGEGGNPPPPVLILTTYDTDADILAAVEAGASGYMLKDAPPEQ 121 Query: 116 LLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 + +A+ + A G + V L G +P L+ RE+ +L LA G+SN+ +A Sbjct: 122 IRQAVLSAAAGQTALAPEVAARL-----MGRIRNPSPALSGREVQLLELLATGMSNRAMA 176 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L ISE TVK H+ ++ KL V +R AA + Q+R Sbjct: 177 KQLFISEATVKTHLVHIYSKLGVDNRTAAIAVATQRR 213 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 85/218 (38%), Positives = 121/218 (55%), Gaps = 12/218 (5%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR----LDIDVIL 57 P + +VMIVDDH ++R G++ L DPG EV+AEAGDG A++L R D+IL Sbjct: 8 PRMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIIL 67 Query: 58 LDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 +DL M GM+G + +R +I+ILT V ++AGA Y+LK E L+ Sbjct: 68 MDLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELI 127 Query: 118 EAIRAGAKGSKVFSERVNQY----LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQ 173 A++ +G V + V Q LR+R + G + S +TERE +VL +A+G SNK Sbjct: 128 YALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDD----SGMTEREKEVLLLIAEGKSNKD 183 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IA L+IS +TVK H+ NLL K + R I +Q Sbjct: 184 IAEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQ 221 >UniRef50_C6P057 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P057_9PROT Length = 235 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 128/220 (58%), Gaps = 11/220 (5%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLAN--RLDIDVILL 58 MP+ ++++VDD L RRG+ +LL G V+ G + DL + + D++++ Sbjct: 1 MPDE--LKIVLVDDQSLCRRGLSELLSRCYGFNVLGAVG---TIEDLRSLIKEQPDLLVV 55 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 DL MK M GL + LR++G ++LT+SD+ D+ I AG GYLLKD PE +++ Sbjct: 56 DLRMKPMDGLAMIEQLRKEGCDIPAVLLTMSDSEVDLGNAIRAGVRGYLLKDMAPEEVVD 115 Query: 119 AIRAGAKGSKVFSERVN----QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQI 174 AIR A G V + + LR + ++ +LTERE ++L L++G SNK I Sbjct: 116 AIRRVAAGELVVAPTMTVKMIDMLRGDQSGQEPKNSLKLLTEREREILQLLSRGESNKAI 175 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 A L+IS TVK H+R++L KLN+ SRV A +LF +++G Sbjct: 176 ALTLSISYDTVKQHVRHILNKLNLSSRVKAAVLFAKEQGT 215 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 7/212 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++ DDH ++R G++ LLE + EVV EA DG A++L L V++ DL M GMS Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 67 GLD-TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ T ++R TA ++IL++ + V + AGA Y+LKDS E L+ ++R + Sbjct: 62 GIEVTYQVVKRSPKTA-VVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 126 GSKVFSERVNQYLREREMFGAEE----DPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G + S +++ E M + E DP+ LT RE +VLH +AQG + +IA L IS Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +TV+VH N++RKL++R++ + + QRG Sbjct: 181 PRTVEVHRANMMRKLDLRNQT-QLLRYALQRG 211 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 118/209 (56%), Gaps = 2/209 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M P +V++VDD ++R G++ + + P E+V EAG G +AI A L DVIL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM M G+ + R A+++ILT D + + + GA GYLLK++ PE +++I Sbjct: 62 NMPQMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 + KG + Q L + + + + F +T RE DVL +A G SN++I+ L Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATIL 207 +I+E+TVK H+ ++L ++ V+SR I Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIW 210 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 5/210 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++ DDH L R+GVR LL + EV EA + A+ LA +L DV+L+D+ M GMS Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 + +R++ ++I L++ D + +D GA+GY+LKDS + L+ AIR +G Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 128 KVFSER-----VNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 S R V+ + + G F LT+RE ++L LA+G S K+IA+ +S Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +TV+ H NL+RKL++ ++ +Q++ Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYAIQKK 214 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 125/212 (58%), Gaps = 10/212 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH L R G+R+LLE++ EV+ EA DG + +++ + L DV+L D++M Sbjct: 4 IRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKD 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + L+ G + + + +T D + AL G D Y+LK S LL AIR+ +G Sbjct: 64 GIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 127 S-----KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 KV + ++ + R RE E D S LT RE++VL+ ++QGL+N +IA + +S Sbjct: 124 HSYVDPKVAGKLLSTFNRRRE----ERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLS 179 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 E+TVK H+ ++L+KL++ R A + F +RG Sbjct: 180 EKTVKNHVSHILKKLDLVDRTQAAV-FAWKRG 210 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 + ++VDD L+R G+R LL+ P EVV EA DG +A+ L RL DV+L+D+ M + Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L ++ILT V+ + AGA GYL+KD +P +L+A+R A+G Sbjct: 62 GIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARG 121 Query: 127 SKVFSERVNQYL--REREMFGAE-----EDP----FSVLTERELDVLHELAQGLSNKQIA 175 + + V + R R A+ E P + LT RE DVL + GLSN +IA Sbjct: 122 EPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIA 181 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 LN+ TVK HI LL KL +R+RV A IL Sbjct: 182 RDLNVGVTTVKTHIVALLEKLGIRNRVQAGIL 213 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +VMIV+D LMR G+R LL+L+ G EVV EA DG A++ +V+L+D+ M M Sbjct: 4 PVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRM 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + L R+ IILT D VF + AGA GY+LKD+ E L AI + Sbjct: 64 DGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHR 123 Query: 126 GSKVF----SERVNQYLREREMFGAEEDPFS-VLTERELDVLHELAQGLSNKQIASVLNI 180 G V + +V L A P S L+ERE++VL +A G SN++IA L I Sbjct: 124 GEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYI 183 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E TVK HI ++LRKL R R A + L++ Sbjct: 184 TEGTVKNHISSILRKLGFRDRTQAALYALER 214 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 7/201 (3%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V++VDDH LMR G+ L+ VV A DGA A++ RL V+L+DL+M + G+ Sbjct: 4 VLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLDGV 63 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + + + ++++LT V +DAGA GY+LKD++P LL AIR+ A+G Sbjct: 64 AATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARGHS 123 Query: 129 VFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 RV R + A P LTERE +VL + GL+NKQIA L I E TVK Sbjct: 124 PLDPRVA-----RTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVK 178 Query: 187 VHIRNLLRKLNVRSRVAATIL 207 H+ ++ +++ VR R +AT+ Sbjct: 179 AHLTSVFQRIGVRDRTSATLW 199 >UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micrococcineae RepID=A3TM12_9MICO Length = 217 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 7/204 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +P +V+IVDDHP++R G+R LL P E+V EAG+G A+ L DV+L DL Sbjct: 9 PE-SPIRVLIVDDHPVVRSGMRTLLAASPCIEIVGEAGNGDEALALVGSTSPDVVLSDLR 67 Query: 62 M-KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G+ G+ A+R ++I+T D +D+ ++AGA GYLLKD+ P+ ++ AI Sbjct: 68 LGAGLDGVGVTRAVRATHPDVAVLIITTFDHDADIVRAVEAGAAGYLLKDALPDEIIAAI 127 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G V S ++ Q + E G L+ERE +VL + +GLSN +IA L I Sbjct: 128 RAAAVGETVLSAQLTQRVVETMRVGQRP-----LSEREREVLVLVGEGLSNDEIAKQLFI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAA 204 S TVK H+R+L KL SR A Sbjct: 183 SRATVKTHLRHLFGKLEADSRTGA 206 >UniRef50_C0WF90 Possible response regulator n=5 Tax=Corynebacterium RepID=C0WF90_9CORY Length = 219 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 11/215 (5%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP+ +VM+ DD ++ + +L EVVA A G A+ LA R IDV +LD+ Sbjct: 1 MPK---IRVMLADDQAMLVAALSTILNAQEDIEVVATAASGGDAVSLALRHRIDVAILDI 57 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M GM G+ A+ +II+LT + V I AGA G+LLKD+DPEVL+ A+ Sbjct: 58 RMPGMDGIAAAQAILSRTPNCRIIMLTTFNEEDLVSQSIAAGAHGFLLKDADPEVLVHAV 117 Query: 121 RAGAKGSKVFSERVN--------QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNK 172 R AKG V + +V + L ++ E S++T RE++VL +A+G +N Sbjct: 118 RDVAKGESVLAAQVTGPVLEGYRKALTHSQLSPHERQGLSLVTRREMEVLTLIARGATNS 177 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 +IA ++I++ TVK H+ L+ KL R RVA +L Sbjct: 178 EIAGHMSIADTTVKTHVSALMSKLAARDRVALVLL 212 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 5/196 (2%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 M+ DDH ++RRGVR L+E PG V EA +G A+ LA L DV++LD+ M ++GL+ Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R +II+LTV D+ + +DAGA GY+LK+ L++AI A +K + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 130 FSERV-----NQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 R N +ER + + LT+RE +VL LAQG SN+++A L+IS +T Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 185 VKVHIRNLLRKLNVRS 200 V+ H N++RKL S Sbjct: 181 VETHRANVMRKLGASS 196 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 122/214 (57%), Gaps = 3/214 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +V+I DDH L R G++ LLE + G ++V EA +G A++L + L D++L+DL Sbjct: 1433 MTNKTGLRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M M GLD + + D + ++I+LT S+ D+F I AGA G++ K+ + E + + Sbjct: 1492 SMPVMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLL 1551 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGL-SNKQIASVLN 179 R +G + R+ L + +LT+RE ++L L G+ S K ++ L Sbjct: 1552 RNVIRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLG 1611 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +SE TVK H+RN+L KL+++SR A + + Q G Sbjct: 1612 VSEHTVKYHLRNILSKLHLQSR-AQVVAWAVQHG 1644 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 115/203 (56%), Gaps = 6/203 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+I DD PL+ + +L +VVA A +G AI+ A + IDV +LD+ M + Sbjct: 9 PIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQMPYV 68 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D A+++ + +I++LT D+ V ++ G G+LLKD+ PE L++AI Sbjct: 69 NGIDAAQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAINRIYH 128 Query: 126 GSKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIASVLN 179 G+ V S V +Y+ + + P F LT REL+VL +AQ +N +IA+ L+ Sbjct: 129 GASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEIANYLH 188 Query: 180 ISEQTVKVHIRNLLRKLNVRSRV 202 I +TVK ++ L+ K+ VR RV Sbjct: 189 IGSETVKTYVSRLISKIGVRDRV 211 >UniRef50_C0GEE4 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEE4_9FIRM Length = 205 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I+DDHPL+R+G+ + L+ E+ A +G A+++ + DV L+DL + G Sbjct: 1 MRVIIIDDHPLVRKGLELVASLEEDFEICGFAANGLEAMEVLEKHSPDVALVDLRLPGEH 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GLD + R T + I+LT ++ + DGY+LK++ PE L+ ++R KG Sbjct: 61 GLDIIEKARSINSTCKYIVLTSYATKEEIKQAMALEVDGYILKETLPEELITSVRMIHKG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 K F + Q+ E + ED S LT RE++VL L++GL+NK+IA L ISE TVK Sbjct: 121 RKYFDPVIVQHALEEK----NEDKLSELTTREMEVLKFLSRGLNNKKIAEDLFISEHTVK 176 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ +L KL ++ R A + + Q Sbjct: 177 KHVGQILTKLELQDRTQAALYGVSQ 201 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 120/208 (57%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH ++R GVR L +VV EA +G A+++ L D+IL+D+ M M Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + +R + +II LT +F I AGA GYLLKDS P+ LLEAIR +G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 127 SKVFSERV-NQYLREREMFGAE-EDPFS-VLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + + L E G + E P LT RELD L +A+G SNK IA + +SE Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H+ ++L KL++ +RV AT+ L++ Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALRE 212 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 7/205 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH +MR G+ + + + +V EA +G ++ + DV+ +D + G Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G ++ LR + A++++L+V + D++ ++AGA GY+ K ++ E +LEAIR G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 F + L R A LT RE VLH + GLSNK+IA+ L++SE TVK Sbjct: 125 ETYFPAPIASKLASRRTRDA-------LTPREHQVLHHIVAGLSNKEIAAALHMSEATVK 177 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 +HI N L KL+V R A I+ +Q+ Sbjct: 178 LHISNTLAKLHVADRTQAAIVAVQR 202 >UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SF76_THIDA Length = 210 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 124/209 (59%), Gaps = 10/209 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGA---SAIDLANRLDIDVILLDLNM 62 P ++++DDHPL+R GV ++ +P E+ A+ + A + + NR D LLD ++ Sbjct: 4 PLNIILIDDHPLLRMGVAGYIQQEPDLELTAQFANAAELRAWMAAGNR--ADAALLDRSL 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 GLD ++ LR G+ ++I+LT++D+ ++ I +G DGY++K S+P+ +L AIR+ Sbjct: 62 PDADGLDLVSDLRDLGI--KVIMLTIADSDEEISEAIASGVDGYVVKSSEPDQVLAAIRS 119 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G F + Q + E+ + S LT RE++++ + +GLSNK IA + +SE Sbjct: 120 VCDGQSSFPLNIMQKMARGELNNS---ALSALTAREMEIVDHVKEGLSNKAIAYKMTLSE 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H+RN++ KL +R+RV L L++ Sbjct: 177 NTVRNHLRNIMEKLGLRNRVQVATLALKE 205 >UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10 Tax=Firmicutes RepID=Q73CG3_BACC1 Length = 214 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 6/210 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 + V+IVDDH ++R G++ ++E +++ EA +G A+ + DVIL+DLNM MS Sbjct: 3 YNVLIVDDHFVVREGLKLIIETSDSFQIIGEATNGEEALSFIEKKKPDVILMDLNMPKMS 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+T+ L + IIILT + + I+ GA GYLLKD+D E L + A +G Sbjct: 63 GLETIEVLNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIRG 122 Query: 127 SKVFS----ERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + E++ Y R+ E+ + LTE+EL VL +A+G NK IA + I+E Sbjct: 123 EILLQPNIMEKIVNYKRKEIHANVVEE--NNLTEKELFVLKAIARGNKNKDIAFDMGIAE 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +TVK ++ N+ KL V SR A + ++++ Sbjct: 181 RTVKAYLTNIYNKLGVNSRSEAVAVSIEKK 210 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 120/200 (60%), Gaps = 6/200 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++V+I DDHP+ R +R LL+ DP EV+ EA +G A L ++ D++L+D+NM S Sbjct: 4 YRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWS 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA---- 122 GL+ +++ +++IL+VSD +D+ I GA GYLLK+ +P+ + + A Sbjct: 64 GLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGE 123 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 ++ ++ + R+ R+ E +E +VLT RE +++ + G +N++I+ L I+E Sbjct: 124 DSELTREMATRLMYRFRQEE--ATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAE 181 Query: 183 QTVKVHIRNLLRKLNVRSRV 202 TVK H++N+L KL + +RV Sbjct: 182 NTVKNHLKNILEKLQLANRV 201 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 1/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDHP++R G+ +LE VV EAGDG A+ L DV+L+DL M G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + ++R A++++LT D + + AGA GYLLK + E + A+R +G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + V L R +P LT RELDVL +A+GL NK+IA L+I+E+TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H + RKL+V R A +Q+ Sbjct: 182 KFHANAIYRKLDVSGRTEAVSKAIQR 207 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 116/198 (58%), Gaps = 9/198 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DDH L+R G+R L P EVV EA +G A+ LA+ L DV+L+D++M M Sbjct: 4 PIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVM 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKD-SDPEVLLEAIRAGA 124 +GL+ +R+ ++IL++ D S V ++ AGA GY+LKD S PE ++ AI + A Sbjct: 64 NGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPE-MITAISSVA 122 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G FS V L EDP+ LT+RE VL +A+GL NK++A L IS +T Sbjct: 123 SGGYYFSSAVGPTLVGTATSAPIEDPYG-LTDRERQVLTAIAKGLPNKEVAKSLGISVRT 181 Query: 185 VKVHIRNLLRKLNVRSRV 202 V+ H +LN+R +V Sbjct: 182 VESH------RLNLREKV 193 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 3/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VM+VDDH ++R G++ L L P EVVAEA DG + A + DV+++DL M M+ Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ AL ++ AQI+ILT + ++ +++AGA GY+LK S + +L AIR A G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V ++ E D LT RE ++L LA+G N++IA IS +TVK Sbjct: 124 EYAIETEVE---KKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVK 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ N+L KL V R A + Q Sbjct: 181 THVSNILSKLAVSDRTQAVVYAFQH 205 >UniRef50_B7DQP6 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQP6_9BACL Length = 210 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 124/207 (59%), Gaps = 2/207 (0%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP ++ +V+DHP++R G+R LL L+P E V EA SA+ L R+ +DV+LLDL + Sbjct: 3 TPIRIAMVEDHPVVREGLRVLLNLEPDMEFVGEAESATSALALIQRVPVDVLLLDLVLGE 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+D + ALR+ +I+ L+ + + L AGADG+L K DP LL AIR A Sbjct: 63 EDGIDLIPALRKAAPETRILALSSFTDPARMARLASAGADGFLPKTVDPTHLLAAIRQVA 122 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G VF + + L+E + E + LT RE +L ++ +GLSNK+IA L ISE+T Sbjct: 123 AGRVVFDRAMLKALQEPD--AEEAKRLAQLTPRESQILRQVTKGLSNKEIADRLQISERT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H++++ KL V+ R +A +L ++ Sbjct: 181 VKAHLQHIFDKLGVQDRTSAAVLAIRH 207 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 8/212 (3%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++VDDH L R+G+ +LLE EV A G+ L DV++LDLNM G G Sbjct: 5 RIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRPDVLILDLNMPGTDG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 + + LR G I+ILT+S+ D+ + AGA+GYLLK +P+ +++AI +G Sbjct: 65 ITLMQQLRNAGFALPILILTLSETEDDLARALRAGANGYLLKSMEPDEVVDAILRAQRGE 124 Query: 128 KVF-----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 V ++ V Y ++ + G+ D LT RE ++L L++G SNK IA L+IS Sbjct: 125 TVVAPAMTAKLVKLYDQKGQDAGSLLD---ALTPREREILSHLSRGESNKAIARTLDISH 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TVK+H+R++L KLN+ SRV A + ++ + A Sbjct: 182 DTVKLHVRHILAKLNLSSRVEAAVFAVEHKVA 213 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 7/210 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +V+I DDHP++ G+ ++ P VV +A G A+ LA + DVIL+DL Sbjct: 18 PEPGVIRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLR 77 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M GMSG++ +R + + +I+LT D+ + AGA YLLK LLEAIR Sbjct: 78 MPGMSGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIR 137 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + G F + + + A L+ RE+D+L + +GLSN++IA LNI+ Sbjct: 138 SVRTGHTYFPRAIRNSVPGKLNRAA-------LSPREMDILRLIVRGLSNQEIADALNIT 190 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+ +LR+L+V R A ++ +Q+ Sbjct: 191 RGTVKWHVNIILRRLDVNDRTQAVVVAVQR 220 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 8/205 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDH +MR G+ +P EVVA+ +GA AI+ DV++LDL M GMS Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMS 69 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + ALR + ++++ + A +V+ + AGA G+++K+ E LLEAIR G Sbjct: 70 GVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAG 129 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + + + ER M + L+ RELDVL +A+G SNK+IA+ L++ E T K Sbjct: 130 EQYVPPEIAMRMGERLM--------AQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAK 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 +H+ N+L KL V R A ++ +++ Sbjct: 182 IHVANILTKLGVSDRTQAIVVAVRR 206 >UniRef50_C9Z3C4 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z3C4_STRSW Length = 221 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 4/202 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V++ DD ++R +R +++++ +VV EA DG +AI +A RL DV+++D+ M M G+ Sbjct: 5 VLLADDQDMVRSSMRIMIDVEADLKVVGEASDGEAAIGMAARLRPDVVVMDIRMPRMDGV 64 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 ++R ++ LT D +F + AGA G++LK LLE IRA A+G Sbjct: 65 AATRSIRSASSPPAVLALTTFDLDEYLFGTLRAGAAGFVLKQDSAATLLEGIRAVARGEG 124 Query: 129 VFSERVNQYLREREMFGAEEDPFSV---LTERELDVLHELAQGLSNKQIASVLNISEQTV 185 S + L ER E+ P+ + +T RE DVL L + +SN QIA L+I E TV Sbjct: 125 FVSPGPTRRLIERVSV-PEDTPYQLPAEVTRRERDVLALLGRAMSNTQIAHRLHIEESTV 183 Query: 186 KVHIRNLLRKLNVRSRVAATIL 207 K H++NLL KL+ R+RV A ++ Sbjct: 184 KYHVQNLLTKLDARTRVQAALI 205 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 118/217 (54%), Gaps = 12/217 (5%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E P +V +VDD L+R G+ L++ P VVAEAG G A+ + DV+L+D+ M Sbjct: 5 ETAPVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRM 64 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G++ AL R ++++LT D F I+AGA G+LLKD+ PE LL AIR Sbjct: 65 PEMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRT 124 Query: 123 GAKGSKVFSERVNQ--------YLREREMFGAE----EDPFSVLTERELDVLHELAQGLS 170 +G V + + LR ++ AE + + LT RE +VL +AQG + Sbjct: 125 VHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAA 184 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 N +IA+ L +SE TVK H+ +L KL R RV A ++ Sbjct: 185 NLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLI 221 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 110/203 (54%), Gaps = 1/203 (0%) Query: 11 IVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDT 70 ++DDH ++R+ V ++LE + V+ ++GD S I L DV +LDL M GM+GL Sbjct: 8 LIDDHHVLRQAVVEMLEAEEDISVIGQSGDARSGIGEIANLKPDVAILDLKMPGMTGLAA 67 Query: 71 LNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA-GAKGSKV 129 + + R III T+ D + V+ +AGA GY+LK + E LL A+RA A G + Sbjct: 68 IGEILRAAPKTGIIIFTMYDNPAYVWETTNAGASGYVLKSASKEDLLRAVRAVHAGGGYL 127 Query: 130 FSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHI 189 +E LR + LT REL VL LA G SNK IA L+I+E TVK H+ Sbjct: 128 QAEVTKPLLRRLAQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSITEDTVKAHL 187 Query: 190 RNLLRKLNVRSRVAATILFLQQR 212 ++L KL R A + L+Q+ Sbjct: 188 KSLYEKLGASDRAHAVAISLRQQ 210 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 8/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +++IVDDH + R+G+ L +P E+VAEA +G A+++ D++L+D+ Sbjct: 1 MRSPTNTRILIVDDHFIARKGLIGSLSAEPDIEIVAEANNGFQAVEMFVLHRPDLVLMDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G+ +R D A+I +LTVSDA D+ IDAG GYL K + E LL AI Sbjct: 61 RLPLQDGVQAARTIRNDHPQARIAMLTVSDAEEDILGAIDAGVVGYLPKSVEREQLLTAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A+G + F+ + LR LT+RE +VL ++ +G SNK+I L I Sbjct: 121 HRLAEGGEYFAPEIEAKLRSTNRVS--------LTKRETEVLTQIVKGRSNKEIGYDLGI 172 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E TV++H+ +L +KL+V R A ++ +Q+ Sbjct: 173 AEPTVRLHLTHLFKKLHVMDRTQAAMVAVQR 203 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 15/220 (6%) Query: 1 MPEATPFQV--MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILL 58 M + P+ V +IVDD PL+R G+ +L P VVA+AGDG + L +R DV+L+ Sbjct: 1 MTASEPWTVGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLM 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M M GL LR ++I+LT DA V + AGA G+LLKD+ P+ ++ Sbjct: 61 DIRMPVMDGLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVT 120 Query: 119 AIRAGAKGSKVFSERVNQYL----------REREMFGAEEDPFSVLTERELDVLHELAQG 168 A+R A+G V S V + L R R G D ++L RE +V L QG Sbjct: 121 AVRQVARGYPVLSPVVTRRLIARVADSGHDRRRTRAG---DRLALLNAREREVAVALGQG 177 Query: 169 LSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 SN +I +VL++S TVK H+ +L KL + +RV +L Sbjct: 178 RSNAEIGAVLHLSVPTVKTHVSGILTKLGLNNRVQIALLV 217 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 17/206 (8%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V++VDDH + R GV L L+ EVV EAGDG A++ ++D DV L+D+ M M G Sbjct: 6 RVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMGG 65 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ ++ + G+ +I LT + D+ L AG G++LK S + L+ AIR + G Sbjct: 66 VELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSGGD 125 Query: 128 KVFSERVNQYL---------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 R L RER M S L+EREL+VL+ LAQGL+ ++IA L Sbjct: 126 NYVDSRAAGKLLNCFSEDTSRERGM--------SRLSERELEVLYWLAQGLNGQEIAERL 177 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAA 204 ++S++TVK HI ++L KL V R A Sbjct: 178 SLSDKTVKNHISHILAKLKVSDRTQA 203 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V +VDDH L+R GVR LLE DPG VV EA DG A+ + DV+L+DL+M M Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ A+ ++++LT V ++ AGA GY+LKD++P LL A+ A A+G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 RV L + D L+ RE VL +AQGL+NKQ+A L I+E+TVK Sbjct: 122 EVPIDPRVAGALLPSAGGPSVAD---RLSPRETQVLRLVAQGLANKQVARALGITERTVK 178 Query: 187 VHIRNLLRKLNVRSRVAATIL 207 H+ + R++ V R +A + Sbjct: 179 AHLGRVFREIGVLDRTSAALW 199 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 125/226 (55%), Gaps = 27/226 (11%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R G+ +L+ +P VA+AGDG A+ L +R D DV+L+D+ M M Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 67 GLDTLNALRRDGVTA-----QIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 GL + R A +++LT D + V + + AGA G+LLKD+DP++L+ A+R Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 122 AGAKGSKVFSERVNQYLRER-----EMFGAEEDPFSV---------------LTERELDV 161 A +G + + L ER GA DP + L+ERE DV Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGA--DPVAAAPHAADGRWTGLLAQLSERERDV 188 Query: 162 LHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L +A+GLSN+ +A+ L +SE TVK H+ ++L KL + SRV A ++ Sbjct: 189 LVWMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVV 234 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDHP++R G+ +L PG EVV EAGDG + LA+ L DV+LLDL M G Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L LR ++++ T D + AL + GA G LLK + + +A+R G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDDERLLEALRE-GARGCLLKGASRTEIFDAVRTVHAG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V + + +EM G E +P LT REL+VL +A+GL+N+++A L ISE+TVK Sbjct: 123 GSVIPPEITARVL-KEMRG-ESEP---LTPRELEVLRLVARGLTNREVARALFISERTVK 177 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRG 213 H+ +LL KL +R A + ++RG Sbjct: 178 FHVSSLLAKLRAENRTQA-VAIARERG 203 >UniRef50_A6UGT6 Two component transcriptional regulator, LuxR family n=2 Tax=Sinorhizobium RepID=A6UGT6_SINMW Length = 212 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 9/206 (4%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V++VDDHPL+ RG++ ++ P +V G AI L +RL D+ +LD+ M GM GL Sbjct: 5 VLLVDDHPLLLRGLQDIIAAAPDFTIVGATASGVEAISLISRLQPDIAVLDVAMPGMGGL 64 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + L ALR ++I LT + + V + G G LLK+ PE LL+ +R A G K Sbjct: 65 EILRALRGTHRFTRVIFLTATISGPQVAEALKMGLSGLLLKEYAPEALLDCMRQVAMGGK 124 Query: 129 VFS----ERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 E+ +Q + + + FS+LT RE ++ + GLSN+ IAS L SE T Sbjct: 125 WLPADLMEKASQVSEDVTL-----ERFSLLTPREREIAALICGGLSNRMIASRLGTSEGT 179 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQ 210 + +H+ N+ RKL++ +R L +Q Sbjct: 180 IGIHLHNIFRKLDISNRATLAALHVQ 205 >UniRef50_Q67L26 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67L26_SYMTH Length = 224 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 119/217 (54%), Gaps = 13/217 (5%) Query: 11 IVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDT 70 +VDDHPL+R G+RQ+L L+P EVV EAGD A+ LA L DVILLDL + +GL+ Sbjct: 1 MVDDHPLVRNGIRQVLSLEPDMEVVGEAGDDQEALRLAQELRPDVILLDLALPRRTGLEL 60 Query: 71 LNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVF 130 L LR + Q++ILT S + D A + AGA GYL+K PE L IR +G Sbjct: 61 LPRLREELPETQVVILTYSASEQDAIAALQAGAAGYLVKSMAPEALAARIREAFRGDVPV 120 Query: 131 SERVNQYLREREMFGAE-------------EDPFSVLTERELDVLHELAQGLSNKQIASV 177 S V + + +E E S+L+ RE +L +A G +N++IA Sbjct: 121 SGSVMRNVLRAMSTPSELPPPTPGGQPGAGEAAESLLSPREAQILRRIAAGNTNREIAEQ 180 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L +SE TVK +++++L KLN+ +RV A L A Sbjct: 181 LGLSENTVKNYVKSILAKLNLENRVQAAAWALNNPWA 217 >UniRef50_Q5MJZ1 Nitrate/nitrite regulatory protein n=1 Tax=Methylophaga aminisulfidivorans RepID=Q5MJZ1_9GAMM Length = 226 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 10/206 (4%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP V++VDDHPL RRGV +LL V+AE + + +D D++LLD+ M G Sbjct: 4 TPISVVVVDDHPLFRRGVVELLNDSEEMTVIAEYDNAEALLDNIENTYPDILLLDMQMPG 63 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 SGL L LR +III+T + + + GA+GYL KD+ P+ +L + + Sbjct: 64 KSGLGVLKQLREHDNQLKIIIITACNEQDKLLEALRYGANGYLQKDTPPDEILSQLMSVL 123 Query: 125 KGSKVFS----ERVNQYLREREMFGAEEDP----FSVLTERELDVLHELAQGLSNKQIAS 176 G+ + + +LRE + E +P S +TERE + L +A+GL+NK IA Sbjct: 124 HGNVAMNAGAVTSLASHLRENK--DDENNPSSAILSHMTERERETLFYIAKGLNNKLIAR 181 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRV 202 L IS+ TVKV++++LLRK+N+ SR+ Sbjct: 182 ELGISDGTVKVYVKSLLRKVNLHSRL 207 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 120/208 (57%), Gaps = 7/208 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A P +++IVDDH L R G++ +L G VV EA DG +AI L L DV+L+D+ +K Sbjct: 3 ADPLRILIVDDHALAREGLKAVLT-SSGFSVVGEAADGPAAIALTEALCPDVVLMDVRLK 61 Query: 64 G-MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G M GL+ + G+ A++++LT+ D + V + AGA GY+LKD+ + L AI Sbjct: 62 GDMDGLEATRRIAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIVR 121 Query: 123 GAKGSKVFS-ERVNQYLREREMFGAEEDP--FSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G + V+ +R E E DP S LT RE +++H +A+G++NK+I L Sbjct: 122 VAQGQTALPLDLVSAAMRAPEPV--ERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLG 179 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATIL 207 IS TVK H+ L+ KL V R A +L Sbjct: 180 ISPATVKAHVERLIAKLGVTDRTQAAVL 207 >UniRef50_UPI0001744EDA two component transcriptional regulator, LuxR family protein n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744EDA Length = 234 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 122/208 (58%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLL-ELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V +V+D ++R + +LL + + E V D SA+ + DV+++DL + M Sbjct: 19 LRVAVVEDDKVVRTFIERLLGKPEHNCEFVGAWADAESALRELPASEPDVVVVDLELPLM 78 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG + ++ L R ++A ++LTV D + VFA + AGA GYLLK S PE ++ IR+ ++ Sbjct: 79 SGAELISVLSRKMISAAFVVLTVHDDPAKVFAALRAGAHGYLLKGSKPEDIVGGIRSASE 138 Query: 126 GSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G S+ + + L + +E E+ P LT RE +L LAQG+ K++A L++S + Sbjct: 139 GGAPLSQEIARLLIQSFQEPPKTEKPPIPGLTPRETQILERLAQGMVPKEVAFELSLSYE 198 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ +++ + +KL+VRSR A I FLQ Sbjct: 199 TVRDYLKGVYQKLHVRSRTEAVIKFLQH 226 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 124/210 (59%), Gaps = 8/210 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSE--VVAEAGDGASAIDLANRLDIDVILLDLNMK 63 PF +++VDDH L+R GVR +LE GSE VV EA +GA A+ L + D++L+D+ + Sbjct: 2 PFDIVLVDDHKLVRDGVRMILE--RGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLP 59 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM+G++ L R + ++IIL++ D + V + I +GA ++LK + LL+A+R Sbjct: 60 GMNGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTV 119 Query: 124 AKGSKVFSERVNQYLREREMFG----AEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G S +V+ L +R G + P L+ REL VL +A+G ++K IA +L+ Sbjct: 120 ARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLD 179 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 + QTV+ + + +++KL V + T L L Sbjct: 180 LGLQTVRSYRKTMMKKLGVNNVAGLTQLAL 209 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 121/209 (57%), Gaps = 16/209 (7%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++T +++I +DH L+R+G++ L+ +VV EA +G +AI++ + D+ILLDL Sbjct: 1 MTQST-IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDL 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M M+GL T+ L+++ +I+++T+ + + + GADGYLLK DP+ L AI Sbjct: 60 SMPKMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAI 119 Query: 121 RAGAKGSKVFSER---------VNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSN 171 RA G S +N RE DP + LT+RE +V +A+G +N Sbjct: 120 RAIMDGKAYLSSDLSGQLIHSVINPDTRE------AADPLASLTQREKEVFQLVAEGNTN 173 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRS 200 +QIA +L IS +TV H NL++KL++ S Sbjct: 174 QQIADLLFISPKTVDKHRTNLMKKLDLHS 202 >UniRef50_B9XA37 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XA37_9BACT Length = 231 Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 15/214 (7%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAID--LANRLDIDVILLDLNMKG 64 QV +V+D +R + +++ PG + D +A+ ANR DV+L+D+NM G Sbjct: 20 IQVALVEDDAGVRANLASMIDCAPGFQCRGAYPDAMTALKGIPANR--PDVVLMDINMPG 77 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR--- 121 M G + ++ L+ T +++LTV D S +F + AGA GYLLK + + LLEAIR Sbjct: 78 MLGTECVSRLKNVAPTLPVLMLTVYDDSEQIFKSLMAGATGYLLKRTPKDKLLEAIREIA 137 Query: 122 -AGAKGSKVFSERVNQYLRE-----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 GA S+ + RV Q+ +E +E+ A E LTERE VL L++G + K+IA Sbjct: 138 SGGAPMSRQIARRVVQFFQEIKQEPKEITRAPE--IKSLTEREEQVLALLSKGHAYKEIA 195 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 +LNIS +TV+ H+R + KL+V SR AT+ +L Sbjct: 196 DLLNISFETVRTHVRTIYDKLHVHSRTEATLKYL 229 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 6/208 (2%) Query: 5 TP-FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 TP +V++VDDH ++R+G+R L LD G EVV EA +G A+ A RL +V+++DL M Sbjct: 11 TPTVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMP 70 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ LRR ++I LT + + V I+AGA Y+LKD+ + L +AI A Sbjct: 71 VMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAA 130 Query: 124 AKGS-KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A+G ++ E + +R+ F + E S LT +E VL LA+G SNK IA+ +SE Sbjct: 131 ARGEVRLHPEAARRLVRD---FRSPEMRES-LTPKETAVLQLLARGQSNKDIAAEQGVSE 186 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK H+ LL KL + SR A + L+ Sbjct: 187 ATVKTHVSRLLSKLGLDSRTQAALYALK 214 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 115/199 (57%), Gaps = 8/199 (4%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++VDDH L R G+ LL P VV EA G A++ A L DV+L+D+++ G+ G+ Sbjct: 6 LLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGIDGI 65 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + ++R ++++LTV D +F I AGA GYL+K+ LL+ +R A+G Sbjct: 66 EATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARGEA 125 Query: 129 VFSERVNQYLREREMFGAEE------DPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 S R+ + E F E +P L+ RE++VL +A LSNK+IA+ L+ISE Sbjct: 126 AISRRMAARILEE--FARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 183 QTVKVHIRNLLRKLNVRSR 201 TVK H++N+L KL + SR Sbjct: 184 HTVKNHLKNILAKLQLSSR 202 >UniRef50_C6P480 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P480_9PROT Length = 216 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 122/209 (58%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + P ++++ DDHPL R GV L ++P EVVA+AG G A+++A+RL D++LLD++M Sbjct: 2 SNPIRILLADDHPLFREGVAHSLSVEPDFEVVAQAGSGEEAVEMAHRLHPDIVLLDVSMA 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM G+ + + +I++LTVS+ ++ A + AGA GY+LK L R Sbjct: 62 GMGGIAAAGKIAAEAPVVRIMMLTVSENRENLMAALKAGAHGYVLKGVSASELRSITRRV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G + + + D FS LT RE +L L+QGL+N++I ++E+ Sbjct: 122 AGGEAYVTPALAADMLTEFSNPHPIDSFSELTARETTILELLSQGLTNREIGERTYLAEK 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQR 212 TVK ++ ++L+KL+VRSR A ++ +Q+ Sbjct: 182 TVKHYMTSILQKLHVRSRTEAALIAMQRH 210 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 118/218 (54%), Gaps = 13/218 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI--DVILLDLNMK 63 P +V +VDD ++R G R +++ P VVAEAGDG A+ + L + DV+L+D+ M Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M GL AL ++++LT D V I +GA G++LKD+ PE +L AIR Sbjct: 69 RMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTV 128 Query: 124 AKGSKVFSERVNQYLREREMFG----AEEDP-------FSVLTERELDVLHELAQGLSNK 172 G V + + L E + A + P + LT+RE +VL +A+G SN Sbjct: 129 HAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNT 188 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +IA+ L ++E TVK H+ +L KL+ R RV A +L + Sbjct: 189 EIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 15/215 (6%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MPEA P V++VDDH L+RRG R++LE DP VV EA DG A+ LA L V+++D Sbjct: 1 MPEA-PISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDF 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M+G + R I+IL++ +S V ++AG GYLLK++ ++ A+ Sbjct: 60 AMPSMNGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAV 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIAS 176 + A G +V R GA + P LT REL+VL + G SNK+IA+ Sbjct: 120 KQVAAGKQVLDRR----------LGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAA 169 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 VL++S TV VH N+++ L + + + ++Q Sbjct: 170 VLSLSANTVAVHRANIMQTLGIHNTAELVVYAIRQ 204 >UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Tax=Cyanobacteria RepID=B1XRB7_SYNP2 Length = 231 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 6/211 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +P +V++++D L R G+ L+ + E+ AEA DG +A+DL + + D+I+LD+ + G Sbjct: 3 SPLKVLLIEDDELFRLGLATRLQQEALLEITAEAEDGETALDLITKQEFDIIILDVGLPG 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G++T +++ I++LT + + LI+A A GY LK D E L+ AI++ A Sbjct: 63 IGGVETCRQIKQQQPQLPILVLTSHSQPTLINRLIEAQAQGYCLKGVDAESLILAIQSIA 122 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASVL 178 G+ + + Q +R + E P SV LT+RE ++L +A G SN +IA L Sbjct: 123 AGASWWDAQATQQIRAQFQQPMAEMPRSVPAQDNPLTQREGEILALIANGKSNSEIAETL 182 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 I+ TV+VH+ +L+KL R R A ++ L Sbjct: 183 YIAASTVRVHVHAILQKLEARDRTQAVVIAL 213 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 15/219 (6%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E T ++ IVDDH L R G++++ +L+ VVAE G AI +A +++++D+NM Sbjct: 2 EMTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M+G++ L +++IL++ D S + ++AGA G+LLK+ L+ A+RA Sbjct: 62 PDMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRA 121 Query: 123 GAKGS-----KVFSERVNQYLREREMFGAE---------EDP-FSVLTERELDVLHELAQ 167 AK KV + + +Y R + G + +DP + +L+ RE++VLH LA Sbjct: 122 VAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLAD 181 Query: 168 GLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 G SN+ I+ +L ISE+TVK H+ ++LRK++V R A + Sbjct: 182 GRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVV 220 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 116/203 (57%), Gaps = 4/203 (1%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+I DDH ++R G+ +LL + EVV EAGDG A+D+ + DV+L+D+ M ++G Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ ++++ + I+ILT + L++AGA GYLLK + + ++ AIRA G Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 128 KVFSERVNQYLREREM-FGAEEDPFSV---LTERELDVLHELAQGLSNKQIASVLNISEQ 183 V + L ER + E D V L+ RE+++L ++GLSN++IA L +S + Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 184 TVKVHIRNLLRKLNVRSRVAATI 206 TVK H+ N+ K+ R A + Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIV 207 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 119/216 (55%), Gaps = 10/216 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DD P +R+G+R +L++ +V+ EA G A+D+ R D++L+D+ M G + Sbjct: 7 IRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGGT 66 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ ++++LT D VF I AGA GYLLKD++ + LL IRA +G Sbjct: 67 GIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHRG 126 Query: 127 SKVFSERVNQYLREREMFGAEEDP----------FSVLTERELDVLHELAQGLSNKQIAS 176 + +F+ + ++ + ++P LTERE +VL LA G N +I++ Sbjct: 127 ATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEISA 186 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +L ISE T K HI ++++KL R A + ++ + Sbjct: 187 ILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMK 222 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 10/212 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R G+R +L+ PG VV A DG A++LA RL DV L+D+ M M Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 67 GLDTLNALRRDGVT--AQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ AL GV ++++T D V+A + AGA G+LLKD+ P++L +A+ A A Sbjct: 83 GIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAA 142 Query: 125 KGSKVFSERVNQYLREREMFGAE------EDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G + + V R F P LT+RE VL +A G +N +IA+ L Sbjct: 143 CGDALIAPNVTA--RLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADL 200 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +IS TVK HI +L+ KL R+RV + Q Sbjct: 201 HISLSTVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 2/194 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH LMR+GV Q+L +P VV E DG + I +L DVIL+D++M MS Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMPRMS 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL ++ + A+I++L++ + + A+ DAGA GY+LK+S E L+EAI+ A Sbjct: 63 GLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVAAN 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 F + + Q + P SVLT RE +V + G ++K+IA +L++S +T + Sbjct: 123 KTCFPDELTQ--SSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTAE 180 Query: 187 VHIRNLLRKLNVRS 200 H N+ +KLN+ S Sbjct: 181 NHRSNIYKKLNLSS 194 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 118/205 (57%), Gaps = 15/205 (7%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH +R G++ LLE + EVV EA DGA A+++ D++++D+ M ++ Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLT 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + LR + +II+L++ ++ V I AGADGYLLK S E L+A+ A + G Sbjct: 65 GIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSSG 124 Query: 127 SKVFSERVNQY-----------LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 K FS ++ L ++ G E ++T+RE ++L L G NK+IA Sbjct: 125 GKYFSGDISSILISQLTNSTASLEPKQTLGEE----MMITKREKEILTLLLSGKGNKEIA 180 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRS 200 L IS++T +VH NL++KL V++ Sbjct: 181 EALEISKRTAEVHRFNLMKKLKVKN 205 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 121/219 (55%), Gaps = 9/219 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E ++++ DDH L R+G++++L+++ V EA +G +D L ++IL+D+ Sbjct: 4 MDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDI 63 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM ++G++ ++ ++I LT+ + +F ++ GA G+LLKD + L++AI Sbjct: 64 NMPLLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV---------LTERELDVLHELAQGLSN 171 + KG+ + L A+ P ++ LT RE ++L +AQG +N Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 K+I+ L ISE+TVK H+ N+LRK++V R A I L+ Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 122/206 (59%), Gaps = 7/206 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R+G+R +L LD +VV E +G A+ LA L DV+L+DL M M Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ +R+D +++ LT S + V + AGA G+LLK+++ + L A++A A G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 127 S-KVFSERVNQYLRE-REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 V +++ + + RE G E+ LTERE +VL LA+G +NK+IA L I +QT Sbjct: 123 QIHVSPAAISRLMGQVREPSGPEQ-----LTERETEVLTMLARGKANKEIARDLRIGQQT 177 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQ 210 VK ++ ++L KL V SR A + +Q Sbjct: 178 VKTYVSHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 11/214 (5%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++ DD ++R G+ LL L PG EVV A DG A+ L DV+L+DL M G+ Sbjct: 1 MVVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGV 60 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + +R++ Q+++LT +F + AGA GYL KD+ E +++AI A G Sbjct: 61 EATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEA 120 Query: 129 VFSERVNQYLREREMFGAEEDPFSV---------LTERELDVLHELAQGLSNKQIASVLN 179 S +V + L ER + G+E P LT RE +VL +A+GLSN++IA L+ Sbjct: 121 GLSPKVQRRLLER-VTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALH 179 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +S TVK HI NL K R R A + + RG Sbjct: 180 VSAATVKTHINNLFAKTGARDRTQA-VRYAYGRG 212 >UniRef50_UPI0001AEC67C two-component system regulatory protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC67C Length = 214 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 120/209 (57%), Gaps = 6/209 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++V+D L+R G++ LL LD EVV E +G ID N DVIL+D+ M +SG Sbjct: 4 RLILVEDQMLVREGIKSLLGLDDSVEVVGEYENGQQLIDSENGTHCDVILMDIRMPKLSG 63 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 +DTL ALR G+ +++LT D V + AGA GYLLKD E L++ I G Sbjct: 64 IDTLLALRDRGIKTPVLMLTTFDDHELVNGAMRAGAKGYLLKDVSLETLVDTITQIKNGK 123 Query: 128 KVF----SERVNQYLREREM-FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + +E+V Q L+ + F + E+P LTE+E+++L +A G SNK+IA + S Sbjct: 124 TLIQPAVTEKVLQGLKGLNVEFESFENP-EPLTEKEVEILRLIAAGYSNKEIADAMFKST 182 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 T+K + +++ KL VR R A + L+Q Sbjct: 183 GTIKNQVSSIMAKLGVRDRTRAVLKALEQ 211 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 114/205 (55%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++VDDH L+R G+R++LE G VV EA G A+ + D++L+D++M G+ G Sbjct: 3 KILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIGG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ + R ++I+L+V + ++ GA GYL KDSDP+ + AIR A G Sbjct: 63 LEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAAGQ 122 Query: 128 KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 K S + Q + + ++ +PF L+EREL++ L +G IA LNIS +TV Sbjct: 123 KYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTVNT 182 Query: 188 HIRNLLRKLNVRSRVAATILFLQQR 212 H + KLNV + V T L L+ + Sbjct: 183 HRYRMFEKLNVSTDVELTHLALRHK 207 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 11/206 (5%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++++DDH L R G+++LLE++P + EA DG + L R DV+LLD+ M + G Sbjct: 5 RMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLDG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 + + LR + + +T + + L G G++LK S LL AIR+ A+G Sbjct: 65 IGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARGQ 124 Query: 128 KVFSERVNQYLREREMFGA------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +V L GA E D LT+RE +VL LAQGLSN +I++ +N+S Sbjct: 125 CYVDPKVAGLL-----LGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLS 179 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATIL 207 E+TVK H+ ++L+KL++R R A IL Sbjct: 180 EKTVKNHVSHILKKLDLRDRTQAAIL 205 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 118/209 (56%), Gaps = 8/209 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Q+++ DD L G++ LL LD E+V E +G A++ RL ++L+DLNM M Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ A++++ ++ LT D VF + AG+ GYLLKD+ + L+EAIRA + G Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 127 S-----KVFSERVNQYLREREMFGAEEDPFSV---LTERELDVLHELAQGLSNKQIASVL 178 + S+ + ++ R ++ P + L++RE VL L++G SNK+IAS L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATIL 207 +++E TVK H+ N+L KL V R A ++ Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALM 213 >UniRef50_B9L0W5 Nitrate/nitrite response regulator protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0W5_THERP Length = 261 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 116/218 (53%), Gaps = 11/218 (5%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 P +V++VDDHPL R VRQ L+ VVAEA A+ A D+ L+DL + G Sbjct: 30 APVKVLVVDDHPLFRFAVRQFLDRHERFRVVAEAASAHEAVQQAELHRPDLALVDLRLPG 89 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 ++GL L+R +++L+ + S + + GA +L KDS+P +L + A Sbjct: 90 INGLQVTRLLKRQNGKLPVVLLSADENESWLLGALQVGAAAFLAKDSEPREMLAVLEAVV 149 Query: 125 KGSKVFSERV-------NQYLREREMF----GAEEDPFSVLTERELDVLHELAQGLSNKQ 173 G +++ + L E + + E P +VLT REL VL +AQG+SNK+ Sbjct: 150 AGEDRLPQQILDRPHLARRVLGELQRYVVGEAGLESPDAVLTVRELQVLDCVAQGMSNKE 209 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IA L I+EQTVK H+ ++LRKL + RV + ++Q Sbjct: 210 IAEALFITEQTVKNHMTSILRKLGAQDRVDVILAAVRQ 247 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 10/210 (4%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++IV+DH LMR G+RQ+L P EV EA DG A+ LA L D++L+DL + MSG Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSD--PEVLLEAIRAGAK 125 + L+R+ +++ LT D VF + AGADGY LK + LL A+ + Sbjct: 63 TEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVRD 122 Query: 126 GSKVF----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G+ ++RV + L GA ++P S ERE++VL +A GL+N +I L I+ Sbjct: 123 GAAWLDPDIADRVLRDLGRIPQAGA-DNPLS---EREMEVLKLIADGLTNAEIGRRLYIA 178 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+VH+ N++ KL V RV A + L++ Sbjct: 179 SGTVRVHVSNIIAKLGVNDRVQAAVRALRE 208 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 109/204 (53%), Gaps = 5/204 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +A V++VDDH L R G R++LE +VV +A G A+ + NRL V+L+D+ + Sbjct: 2 KAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRL 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 GM+G++ +R +++I+T D V D GA GYL K + L+EA+RA Sbjct: 62 PGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRA 121 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G+ V + L P + LT+RE VL LA+G+ NKQIAS L IS Sbjct: 122 VAGGNSVLQPTLMAAL-----LAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATI 206 +TV+ H + KL V SR A + Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVV 200 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 117/220 (53%), Gaps = 13/220 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH ++ +G+ L + P E+V EA +G A++ A L D++L+DLNM M Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ ++ ++++LT S + + GA GY+LKD +P+ L EAIR+ KG Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 127 SKVFSERVNQYLREREM----------FGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 + +++ L R + LT REL+VL L +GLSNK IA Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATIL---FLQQRG 213 L ++E+TVK H+ ++L KL++ R A + Q +G Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPLFQNKG 222 >UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTE5_9GAMM Length = 213 Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 8/206 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R G+ LL + EVV EAGDG SA+ L ++ DV+L+D+ M G+S Sbjct: 2 IRVVIVDDQTLVRHGIANLLGMSDKVEVVGEAGDGESALYLIPQVSPDVVLMDIRMPGLS 61 Query: 67 GLDTLNALR-RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GLD L LR D T +I+LT + + I GA GYLLKD + LL ++ Sbjct: 62 GLDVLRKLRASDDNTPPVILLTTFEDQDTLQQAIRLGAKGYLLKDVTLDNLLASLELVMA 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV-----LTERELDVLHELAQGLSNKQIASVLNI 180 G VF R+N R ++ A S+ LT RE++++ +++G SNK+IA L++ Sbjct: 122 GQSVFDNRINH--RTDDVSAASRSQASLGDAYDLTAREVNIIELMSEGASNKEIAFRLDL 179 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATI 206 TVK ++ ++L KL VR R A I Sbjct: 180 KMGTVKNYVSSVLLKLGVRDRTQAVI 205 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VM+VDDH ++R+G+R LLELD EV EA A+ + + DVILLD + Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L+R +IIILT V I AGADGYLLK+ + E L+ I+A KG Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V V + L + + + LT +E+ +L ++ G +NK+IA ++ IS++TV+ Sbjct: 125 QSVLDPSVTEILFDN-IKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKTVR 183 Query: 187 VHIRNLLRKLNVRSRVAATILFLQ 210 ++ N+L+KLNV +R A +++ Sbjct: 184 NYVSNILQKLNVSNRTEAASYWMR 207 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 5/203 (2%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +V++ DDHP++R G+ +L ++ EVV EA DG A+DLA L DV++ DL Sbjct: 24 PERPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLR 83 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G+ + T ++++LT + ++ ++AGA GYLLKD+ L+ IR Sbjct: 84 MPVLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIR 143 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G V + V L + G+ D LT RE++VL +A+GLSN + L IS Sbjct: 144 EAARGQTVLTPSVATRLVSQ--VGSRAD---RLTPREVEVLRAVARGLSNAAVGHELFIS 198 Query: 182 EQTVKVHIRNLLRKLNVRSRVAA 204 E TVK H+ KL V R A Sbjct: 199 ETTVKTHLIRAFGKLGVNDRTHA 221 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V IV+DH R G+R + +P +VV EA I+ DV+L+D+ + GM G Sbjct: 3 RVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMDG 62 Query: 68 LDTLNALR-RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 ++ ++ R GV ++++LTV ++V A + AGAD Y LK +DP LL AIRA A G Sbjct: 63 IEATKLVKERFGV--RVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 127 SKVFSERVNQ-YLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 S ++ L + + + + L+ REL+VL +A+GLSNK+IA L IS TV Sbjct: 121 STYLDPQIAHIVLGQLSVLSGGQ---AQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTV 177 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K HI LL KL+ R A I ++Q Sbjct: 178 KTHIEELLAKLSASDRTQAAIKAVRQ 203 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 9/212 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD PL+RRG+ +L DP EVV EA +GA A+ LA RL DV+++D+ M + Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L +++ L+ D V + AGA G+L KDS PE L AIR G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 127 SKVFSER-----VNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLN 179 + R ++ Y+R G P + LT RE++V +A GL N I+ L+ Sbjct: 131 EAAVAPRLLTRLISTYVRAPH--GTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLD 188 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IS TVK +I ++ KL VR R A I+ + Sbjct: 189 ISLSTVKNYITSIFDKLAVRDRAQAVIVAYES 220 >UniRef50_D1YA26 Response regulator receiver domain protein n=2 Tax=Propionibacterium acnes RepID=D1YA26_PROAC Length = 218 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 9/210 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDD L+RR VRQ+LE EVV EA DG A+ A + DV+L+DL + GM Sbjct: 3 PVRVLLVDDDTLVRRAVRQILEAADDLEVVGEASDGDGAVRQAPQ--ADVVLMDLRIPGM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG++ + + + ++++LT + + I AGA G+LLK S PE ++ A+RA Sbjct: 61 SGVEATSRITHSPSSPKVVVLTTVTTDAAITDAIHAGALGFLLKTSSPEDIVSAVRAAHT 120 Query: 126 GSKVFSERVNQYLRE-------REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G S + L E R A S LT+RE +V +A+GL+N IA+ L Sbjct: 121 GDAFMSPTSTRQLLEQLRSDTGRRGHRAARKTLSALTDREREVAIAVAEGLTNDAIAARL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILF 208 NIS TVK H+ + KLNV SRV +L Sbjct: 181 NISASTVKAHLSTIQTKLNVDSRVRIAVLV 210 >UniRef50_UPI00003826FC COG2197: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003826FC Length = 217 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 114/211 (54%), Gaps = 14/211 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD L+R G+ +L++ P +VV E GDGA A++LA LD D +LLD+ M M Sbjct: 2 IRVVVVDDEALLRAGIVRLVDTAPDLDVVGEGGDGARAVELARELDPDALLLDMRMPVMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GLD L A+ R+ +++LT A V + AGA GYLLKDS PE L IRA G Sbjct: 62 GLDALVAIHRERPRTAVVVLTSFLADEYVLPALRAGAAGYLLKDSTPEELHHGIRAAVAG 121 Query: 127 SKVFSERVNQYLREREMFGAEED----------PFSVLTERELDVLHELAQGLSNKQIAS 176 + S V ++L + A D + L +E +V+ LA GLSN +I Sbjct: 122 DSILSPAVARHL----LAAAGGDGTARRADARRRLARLAPQEQEVVAALAGGLSNAEIGR 177 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L ++E TVK ++ + + KL +R IL Sbjct: 178 RLFLAESTVKAYLAHAMTKLGTTNRTQTAIL 208 >UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycetales RepID=D0L5W2_GORB4 Length = 216 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 114/205 (55%), Gaps = 9/205 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +VM+VDDHP+ R GV + L D G +VVA A +A A + DV+L+D+ M Sbjct: 5 PVRVMVVDDHPMWRDGVARDLA-DEGFDVVATADGVRAATSRAAAVRPDVVLMDMQMPDG 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G L + A +++L+ SD DV I AGA GYL+K + L+ A+ A A Sbjct: 64 TGATATAELLKVCPEAHVLVLSASDERDDVLDAIKAGATGYLVKSAQRSELVAAVHATAD 123 Query: 126 GSKVFSER-----VNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G VF+ + +Y R G E VLTERE VL E+A+GLS++QIA+ L I Sbjct: 124 GQAVFTPGLAGLVLGEYRRIARSPGPET---PVLTERETQVLREVAKGLSSRQIANRLAI 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAAT 205 S +TV+ H+ LRKL + +RV T Sbjct: 181 SPRTVENHVGATLRKLQLANRVELT 205 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 5/205 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDDHP++R G++ L L EVV EA G A+ + L D++LLDL + Sbjct: 3 LRLLIVDDHPIVREGLKAFLGLYADLEVVGEADSGEEALSKSRALSPDLVLLDLQLSDGH 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL L +++ILT + + GA GYL+K + P LLE IRA +G Sbjct: 63 GLSFLPRFLSLPNPPKVLILTSFLEEDRLRQALSLGASGYLVKHAGPVALLEGIRAAGRG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + L +P + LT +E +VL LA+G+SNK IA L +SE+T+K Sbjct: 123 EVPLDPAAVRLLAR-----PARNPLASLTPKEREVLTHLARGMSNKAIAQALGVSEKTIK 177 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ +LL KLN++ R A +L +Q Sbjct: 178 THVSSLLAKLNLKGRTQAALLAREQ 202 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 117/235 (49%), Gaps = 25/235 (10%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E+ P ++ +VDD PL+R G L+ VV +A DG +DLA + +D+IL+D+ M Sbjct: 7 ESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQM 66 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G+ + + ++I+LT D + V I AGA G+LLKD +PE LL AIR Sbjct: 67 ARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRT 126 Query: 123 GAKGSKVFSERVN----QYLRERE--------------------MFGAEEDPFSVLTERE 158 G V S R+ Q +R E A P + LT RE Sbjct: 127 VHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPRE 186 Query: 159 LDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +D+L +A G SN +I+ +S TVK H+R++L K R RV A +L+ G Sbjct: 187 MDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQA-VLYAYTHG 240 >UniRef50_UPI0001BC30E6 two-component system, NarL family, response regulator DegU n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC30E6 Length = 218 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 114/205 (55%), Gaps = 5/205 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V + ++H L+R+G+ LLE + VV A DG + N++ +V+L+D+N+ G+ Sbjct: 2 PINVFVAENHTLVRQGIISLLENECEVNVVGSAADGFECLSEVNKIKPNVVLIDINISGI 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G + ++ II++ +D + + +I G DG++ KD D E+L A+ + + Sbjct: 62 NGAKIIKLMKEHCFNVGTIIISDNDNAKKMSYVIREGCDGFISKDCDVEILKRAVYSVYE 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDP---FSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G K + ++L E+DP LT+RE++VL +++G NK I++ L I+E Sbjct: 122 GKKYIQPELEKFLNIN--VTQEDDPEERIKNLTKREIEVLLLISKGYVNKDISNELKITE 179 Query: 183 QTVKVHIRNLLRKLNVRSRVAATIL 207 +TVK H+ ++ RK+NV R A + Sbjct: 180 RTVKNHVSSIFRKINVNDRTQAAVF 204 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 4/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V IVDDHP+++ G++ L +V DG+ A++ A L DVIL+D++M M Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D + +++IL++ V + I AGA GYLLKD+ E + AI+A A Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G FS + + L + + E + LT RE VL LA+G ++K+IA +LNIS +TV Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNESEK---LTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRG 213 + H RN+ KL + S +A I + + G Sbjct: 185 EAHRRNMKTKLGIHS-LAKLISYAVKHG 211 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 116/195 (59%), Gaps = 1/195 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDDH ++ G LE +P EVVA A +G A++L DV+L+D++M M Sbjct: 8 PIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIM 67 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ ++ + ++++LT+ D + ++ AGA GY+LK+ +++AI+ + Sbjct: 68 NGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQ 127 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G+ F E L +E+ P + L+ RE +L +AQG S+K+IA++LNIS +TV Sbjct: 128 GATYFCESTTSTLFSQEILPVANKP-NPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 186 KVHIRNLLRKLNVRS 200 + H +N+ KL++ S Sbjct: 187 ETHRQNIKHKLDIHS 201 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 8/205 (3%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 MIVDD L+R G+ LL L EVV A DG + +A +L ++IL+D+ M ++G++ Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R ++++LT + S +F ++ GA GYLLKD + + +++AI G V Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 130 FSERVN-QYLREREM-----FGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNIS 181 + + Q ++E + + P V LTERE+DVL E+ GL+NK+IA L I+ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATI 206 E TVK H+ NL+ KL +R R A I Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAI 205 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 6/199 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG-M 65 ++++VDDHP++R G+R LL+ EVV + GD L D++L+DL + G Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ R + +++ T D+ +D +DAGA GYLLKDS P L AIR Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G S V L +R M +E LT RE++VL LA G +N+Q+ L +SE TV Sbjct: 122 GGSALSPAVASRLMDR-MRAPQES----LTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 186 KVHIRNLLRKLNVRSRVAA 204 K H+ ++ KL V +R AA Sbjct: 177 KTHVNHIFTKLGVDTRAAA 195 >UniRef50_B4EJM2 Two-component regulatory system, response regulator protein n=3 Tax=Burkholderia RepID=B4EJM2_BURCJ Length = 215 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 12/210 (5%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM--S 66 +++ DDH ++R G+R LL LD E+VAE DGAS ++ DV+LLDL M GM + Sbjct: 4 ILVADDHAVVREGIRGLLRLDASFEIVAETDDGASTVEQVRVHRPDVLLLDLMMPGMGHA 63 Query: 67 GLDT-LNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + A+R I++LT SD + A IDAGAD +LLK E LL+AI A Sbjct: 64 GVPAVIRAIRAASGDTHIMVLTSSDDDALALAAIDAGADSFLLKSMRGERLLQAIHAAVH 123 Query: 126 GSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G + Q M GA +PF+ LT REL+VL LA+G SN +IA+ L I+ Sbjct: 124 GEPTLHPGIAQ-----RMIGALRKPPRNPFAALTARELEVLRCLAEGGSNARIAATLGIT 178 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E+TVK H+ N++ KL++ R A L ++ Sbjct: 179 EKTVKTHLGNVMSKLHLSDRTQAVALAWRE 208 >UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VM8_CYTH3 Length = 227 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 112/202 (55%), Gaps = 9/202 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V I DDH + R GVRQL+ + EVV A G A++L DV+++D+ M GM Sbjct: 5 KIKVFIADDHEIFRDGVRQLISNESDMEVVGTASSGEEALELLKDNHADVVIMDIRMSGM 64 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL+T A+ ++ I+ ++ D V ++ GA GY+LKD+ ++ L+ IRA + Sbjct: 65 NGLETSRAILKNDSNTHILFFSLYDRDDYVVTALEMGASGYILKDTSNKIFLKGIRAVSN 124 Query: 126 GSKVFSERVNQYL--REREMFGAEEDP-------FSVLTERELDVLHELAQGLSNKQIAS 176 G F+ V L + +E+ + P S L++RE +L+ + +G +NK+IA Sbjct: 125 GQFYFTGDVTDVLIKKYKELKDVKNTPEISSSSIQSSLSKREYQILNRIREGKTNKEIAE 184 Query: 177 VLNISEQTVKVHIRNLLRKLNV 198 N+S +TV+ H N+LRK NV Sbjct: 185 EYNLSVRTVETHRMNILRKFNV 206 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 120/218 (55%), Gaps = 10/218 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP P ++++ DDH L+R G+R LLE PG +V EAGDG + L + D+ ++D+ Sbjct: 1 MP--APLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G++G D + R+ +++IL++ A V + AGA GYLLKD+ L A+ Sbjct: 59 TMPGLNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLAL 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEE-----DPFSVLTERELDVLHELAQGLSNKQIA 175 A KG S +++ + R F +E +P LT R +++ +A+G S K+IA Sbjct: 119 NAVRKGETYLSPSISKSVLAR--FRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIA 176 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +LN+S +T++ H +L+ +L + VA + + + G Sbjct: 177 FLLNLSVKTIETHRMHLMARLGLHD-VAGVVRYALRTG 213 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 115/197 (58%), Gaps = 5/197 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ +DH ++R+G+ LL +P EVV EA +G AI + L DV+L+D++M ++ Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D L++ +I+IL++ +F + AGA GYL+K S P L++AI A G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 127 SKVFSERVNQ-----YLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 S +++ Y+++++ E +L+ RE +VL +A+G +N++IA L IS Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 182 EQTVKVHIRNLLRKLNV 198 +TV+ H ++ +KL + Sbjct: 184 PKTVEAHRNHIQKKLGL 200 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD L+R G+R L++ VV EA DG A+ LA DV+L+DL M M Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 67 GLDTLNALRRDGVT--AQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G++T A+R D + +++LT D +DV + AGA GYLLKD + L AIR Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 125 KGSKVFSERVNQYLRER----EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + +V + + R +E+ + LT RELD+L + +GLSN++I L + Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATIL 207 S +T + ++ LL KL VR R +L Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVL 208 >UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD Length = 210 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 11/200 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH L GV L + + G VV +G D+ DIDVILLD++M ++ Sbjct: 2 IKVLIVDDHHLFAEGVASLFKPEDGIAVVKHTTNGNEIPDILAGSDIDVILLDIDMPILN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + L+ G +++LT+ + V ++ GA GY+LKD+ L++AI ++ Sbjct: 62 GIACMELLKHKGYDKPVVMLTMHQSMRQVKDALEKGAQGYVLKDASKAELVQAINNASER 121 Query: 127 SKVFSERVN----QYLREREM--FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 F ++N Y R + + G +E L+ERE +++ LA+G++ K I+S L I Sbjct: 122 KNYFHPKINDQVFDYFRGKSVGKSGLQE-----LSEREKEIIKCLAEGMNTKAISSSLYI 176 Query: 181 SEQTVKVHIRNLLRKLNVRS 200 SE TVK H RN++ KLNV++ Sbjct: 177 SEHTVKTHRRNIMHKLNVKT 196 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 16/221 (7%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V++VDDHPL R+GVR L + +++ E + L + + DV+L DLN+ M G Sbjct: 6 KVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMDG 65 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ +RR +++L+V ++ F + AGA Y K+ P+ L +R A+G Sbjct: 66 LEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARGE 125 Query: 128 KVFSE------RV-----NQYLREREMFGAEED----PFSVLTERELDVLHELAQGLSNK 172 V ++ RV Q+ + AE D FS L++RE++VL +A G +NK Sbjct: 126 YVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATNK 185 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 IA L IS QTVK HI ++LRKL++ R A +L+ +RG Sbjct: 186 DIADALKISTQTVKNHISSILRKLSLNDRTQA-VLYALRRG 225 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 18/222 (8%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V +VDDHP R G+R+++ DP VV EA G AI + + D++L+D+NM GM G Sbjct: 9 RVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMGG 68 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA----G 123 L+ L+ + +I+++TVSD + +F I GA GYL K+ P E +RA Sbjct: 69 LEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDDE 128 Query: 124 AKGSKVFSERVNQYLREREMFGAE-----EDP---------FSVLTERELDVLHELAQGL 169 A SK + R+ Q G + P + LT RE D+L + G Sbjct: 129 APMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTGE 188 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 SNK+IA +SE TVK H++N+L+KL++ +RV T +Q Sbjct: 189 SNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQ 230 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 6/207 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 + +V++ DDHPL R+G++ LE + +V EA DG A L L DV LLD+ M G Sbjct: 2 SKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPG 61 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ ++ + + I+LT D+ V A + AGA G++LK + L++AI+ A Sbjct: 62 ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVA 121 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 GS V + GA+E+ L+ RE +VL A+GLS+K++A+ L ISE+T Sbjct: 122 TGSLFLDSEVAS------VVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERT 175 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 V+ H+ ++ KL ++ A +L L+ Sbjct: 176 VQTHLASVYDKLGAHNKTEAMLLALKH 202 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 111/199 (55%), Gaps = 6/199 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM-KGM 65 ++++ DDH ++R G+R LLE + EVV EA +A+ L +D++L+DL G Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG+D LR ++++T D +D+ + AGA GYLLKD+ P LL A+RA + Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G V S V L R P + L+ RE+ VL +A G SN++I L +SE TV Sbjct: 122 GDSVLSPAVASKLMTR-----VRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTV 176 Query: 186 KVHIRNLLRKLNVRSRVAA 204 K H+ ++ KL V+SR +A Sbjct: 177 KSHLVHIFGKLGVKSRTSA 195 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 118/212 (55%), Gaps = 16/212 (7%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDH L+R + +L G +V AG A+ + DV+LLDL M G Sbjct: 1 MRLLLVDDHTLLRVALGDMLS-QHGYQV-EHAGTEIEALSALAKSPPDVVLLDLRMPGSG 58 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L +R +++LT SD D+ + AGA+GYL+KD++P L++ + G Sbjct: 59 GLEVLKRIRSRDSELPVVMLTSSDEERDLLQALQAGANGYLVKDAEPAELIQGLEKVLAG 118 Query: 127 SKVFSERVNQYL--------REREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQI 174 + R+ L +RE GAE DPF+ LT RE ++L +A+ SNK I Sbjct: 119 QTAVASRLTDTLVQMMAGGRSQRE--GAEASRPPDPFAALTPREREILMHVARAESNKVI 176 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 A L +S+ TVK+HI+++LRKL V+SRV A + Sbjct: 177 ARELGVSDGTVKLHIKSILRKLGVKSRVEAAV 208 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 110/198 (55%), Gaps = 6/198 (3%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GMSG 67 V I DDH ++R+G ++ VV EA DG A DL R++ V+LLD++M G +G Sbjct: 4 VAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGENG 63 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L + D + +IIILT+ + + +F + GA GY+LK+S EVLL AIR A G Sbjct: 64 LIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVATGE 123 Query: 128 KVFSERVNQYLREREMFG----AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + Q L + + G AE++P+ L+ RE ++ LAQG +NK+ A L IS + Sbjct: 124 TYIEPNMAQALSGK-LHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISVK 182 Query: 184 TVKVHIRNLLRKLNVRSR 201 TV+ H + KL V SR Sbjct: 183 TVETHRSKIYAKLGVNSR 200 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V ++DDH ++R G+RQ L EVV EAG A A+ L V +LD + S Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D +R +ILT D +F+ I AGA GY+LK+ L+ AIR A G Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 127 SKVFSERVNQYLREREMFGAEEDP-FSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + + V + + ER G EDP + L +RE ++L +A GL+N+QI + L +SE+TV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRG 213 K ++ ++L KL + SR A + ++Q G Sbjct: 216 KNYVSSILEKLGLASRTQAAVYLMKQTG 243 >UniRef50_C1D480 Putative transcriptional regulator, LuxR family, putative sensory transduction protein liaR n=1 Tax=Deinococcus deserti VCD115 RepID=C1D480_DEIDV Length = 210 Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 121/210 (57%), Gaps = 7/210 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A+P +V++V+DH R G+R + +P VV EA G A+++ +R +DV ++D+ + Sbjct: 3 ASPIRVLLVEDHAFTRDGLRVAVNFEPDLRVVGEARSGEEALEVLSRTAVDVAVVDIGLP 62 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM G+ T +RR ++++LT + ++V A + +GAD Y LK + P++LL AIRA Sbjct: 63 GMDGIQTAGEVRRHYPQTRVVMLTAHNLRAEVLAALASGADAYCLKSARPDLLLLAIRAA 122 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNIS 181 A GS +V + + GA P L+ REL+VL +A GL N++I L IS Sbjct: 123 AVGSAFLDPQVAHH-----VLGAMRTPGVPVELSARELEVLRLIADGLGNREIGMQLEIS 177 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +VK+H+++LL KL R A + L+Q Sbjct: 178 VSSVKLHVQDLLEKLQASDRTQAAVKALRQ 207 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 11/219 (5%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + T ++ +VDDH ++R G++ +L E+ E+GD A+D +L+ D+++ D++M Sbjct: 2 KPTNTKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISM 59 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G+SG+D + LR+ + IIL+ D V L++ G +GY+LKD LL AI A Sbjct: 60 PGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEA 119 Query: 123 GAKGSKVFSERVNQYL--------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQI 174 KG S + + + E + FSVL++RE ++L +A+G SN+ I Sbjct: 120 VHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESI 179 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +L IS TVKVH N+++KLN+ +VA +++ + G Sbjct: 180 GKILGISPATVKVHRANIMKKLNLH-KVADLVMYAIRAG 217 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 7/203 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P ++++ DD L+R + L +P E+VAEA DG +A+ DV+LLD+ M M Sbjct: 3 PIRLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMPIM 62 Query: 66 SGLDTLNALRRDG-VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 GL+ L + D T ++I++T D VF ++ GA G+L KD+DPE +L A+R A Sbjct: 63 GGLEVLRHIETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVRVVA 122 Query: 125 KGSKVFSERV-----NQYLREREMFGAEEDP-FSVLTERELDVLHELAQGLSNKQIASVL 178 G + S V +++ R R E P LT RE ++L +A GLSN +IA L Sbjct: 123 AGESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIAERL 182 Query: 179 NISEQTVKVHIRNLLRKLNVRSR 201 +S TV+ H+ + KL R R Sbjct: 183 VVSPATVRTHVGRAMMKLRARDR 205 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 1/202 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DDH ++R+G+R EVV EA G A+ + D++L+DL+M M Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + + II+LT V + AGA Y LKD++PE L++ + Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKTRQVHGGE 120 Query: 127 SKVFSERVNQYLRE-REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 K+ + + L + E++ + LT RE DVL E+A G SNK+IA+ L ISE+TV Sbjct: 121 YKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTV 180 Query: 186 KVHIRNLLRKLNVRSRVAATIL 207 K H+ NLL KL V R A + Sbjct: 181 KTHVSNLLAKLEVADRTQAALF 202 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 2/206 (0%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P AT +V++ DDH L+ G+ L++ G VV EA G A+DLA DV+L+D+ Sbjct: 4 PPAT-IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIE 62 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G+ G++ + T +++LT+ VFA + AGA GYLLK + + ++ I Sbjct: 63 MPGIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIG 122 Query: 122 AGAKGSKVFSERV-NQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A A+G VF V ++ LR AE PF LTERE +VL LA G N +IA L + Sbjct: 123 AVARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQL 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATI 206 + +TV ++ N+L KL+ R AA + Sbjct: 183 TPKTVANNVSNILAKLHAPDRTAAIL 208 >UniRef50_A7NQF6 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NQF6_ROSCS Length = 221 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH L+ G+R LLE + VVA A DG S + + R DV+++DL M Sbjct: 8 IRVVLADDHELVLEGLRGLLERESDMIVVATATDGESLLAIIERERPDVVVMDLAMPTRD 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL L +RR G+ +++ILT + + + ADG+ LK P + IR A G Sbjct: 68 GLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNVAHG 127 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 VF V Q + G + + LT+RE DVL LA+G+ N QIA L + E TVK Sbjct: 128 QIVFPRVVRQAADATQAHG--QSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVK 185 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRG 213 H++N+ +KL V +R A ++ ++ G Sbjct: 186 YHLQNIFQKLGVTNRTEAAQVYYREGG 212 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 5/206 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+IVDDHP++ G++ +LE EVV G AI A L DVIL+DLNM + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL ++ +++IL++ D+ + + GA GY+LKD PE + AI A + Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + L + E LT RE +L ELAQG SNK++A L+IS +TV Sbjct: 143 GEQYLCTGAAGSLSPQSQTSRE-----ALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 + H +N+ RKL + S T L+ Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEH 223 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 6/197 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V+IV+DH L+R G+R +L G V EA DG A LA L D+IL+DL++ GM+ Sbjct: 5 CSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + A++R +II L+V V + AG DGY+LKD+ + L+ A+R G Sbjct: 65 GIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLG 124 Query: 127 SK-----VFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 K ++ V Y+ EM A+ + +LT RE VL +A+G SN+Q+ +N+S Sbjct: 125 KKHLSPELYGNLVESYVSGHEMSTAKTG-WDLLTARERSVLKLVAEGRSNRQVGIYMNLS 183 Query: 182 EQTVKVHIRNLLRKLNV 198 +T++ + +L+RKL + Sbjct: 184 PKTIEKYRASLMRKLGI 200 >UniRef50_Q1IV27 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IV27_ACIBL Length = 217 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 112/213 (52%), Gaps = 6/213 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R + LL P EV+ A +G A+++ ++ DV++LDL M Sbjct: 5 IRVVIADDHAVLRESLVALLNSQPDIEVMGSASNGTEALEIVQKVHPDVLVLDLAMPAGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G D L L R G ++LT S++ D ++ GA G +LK DP L AIRA A G Sbjct: 65 GFDVLRTLDRAGTRVASVVLTGSESQQDYVQVVRLGARGLVLKGDDPSKLFAAIRAVADG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDP----FSVLTERELDVLHELAQGLSNKQIASVLNISE 182 FS+ V + + AE P + L+ERE + +A+G NK IA+ L ISE Sbjct: 125 ELAFSDEVARGV--LNAMAAEPQPAPTNLARLSERERQISFLVARGYKNKDIANELTISE 182 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 TVK H++++ K R R+ +L L + A+ Sbjct: 183 NTVKRHLQSIFSKTGARDRLELAVLALNEISAK 215 >UniRef50_C4RI73 Two-component system response regulator n=6 Tax=Actinomycetales RepID=C4RI73_9ACTO Length = 217 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 3/203 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDD L+R G+R +L + P EVVA A GA AID R DV+LLD+ M + Sbjct: 2 VRIVVVDDDALVRSGLRLILRVAPDIEVVATAS-GAEAIDEITRHRPDVVLLDIRMPDVD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL L +R + +LT DA + + GA G++LKD+ PE L + +RA A G Sbjct: 61 GLTVLRQVRAMPHPPTVAMLTTFDADEYITTALRIGAAGFILKDTHPEHLAQLVRALAAG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQT 184 + V S +V++ + + + E+ ++ LT+RE ++L +A GLSN +I + + +S T Sbjct: 121 AVVLSPKVSRTVVDWRVENGEDAASAIARLTDREREILVHVADGLSNAEIGTRMYLSGGT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATIL 207 VK H+ +L KL V SRV A ++ Sbjct: 181 VKDHVSAILTKLKVTSRVQAALI 203 >UniRef50_B9XH34 Two component transcriptional regulator, LuxR family n=3 Tax=bacterium Ellin514 RepID=B9XH34_9BACT Length = 226 Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++ IV+D+ +R+ + + + PG+ V G A+ L+ DV+L+D+++ G SG Sbjct: 18 KIAIVEDNATLRQYLAEFVAGAPGNRCVCACGSAEEALVKIPSLNPDVVLMDIHLPGESG 77 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI---RAGA 124 + LR Q+I+LTV + +F + AGA GY+LK SD + +LEAI RAG Sbjct: 78 IVCTARLREKLPNLQVIMLTVYKDTKMIFQALKAGACGYVLKRSDDKEILEAIAEVRAG- 136 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G+ + SE +R E+D L+ RE ++L LA+GLSNK+I S LNIS T Sbjct: 137 -GAPMTSEIARMVVRSFIADTPEKDETGQLSGREQEILALLAEGLSNKEIGSKLNISFTT 195 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQ 210 V+ H+ ++ KL+VR R A +L+ Sbjct: 196 VRTHLMHIYEKLHVRCRTEAAAKYLR 221 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 108/209 (51%), Gaps = 9/209 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R G+ LL EVV +AG+G A++L LD DV+L+D+ M M Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L G +I+LT V I AGA GYLLKD D VL ++IR A G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 127 SKVFSERVNQYLRER---------EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 + ++ L R + D S+LT RE D+L LAQG +N++I Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATI 206 L +S TVK H+ + KL VR R A + Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAAL 211 >UniRef50_D1BTX1 Two component transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BTX1_XYLCX Length = 220 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E +P +V++ DD +R R+LL+ G VVAE GDGA A+ LA DV LLD+ M Sbjct: 2 EQSPIRVLLADDDARLRSVYRKLLDRTEGFVVVAETGDGAEAVRLARERTPDVALLDVQM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G+SGLD A+ G ++++LT D V + AG G+LLK++ P +L A+R+ Sbjct: 62 PGLSGLDAARAILAGG-QVRVVMLTTFDLDEYVHDALTAGVSGFLLKNATPAEVLAAVRS 120 Query: 123 GAKGSKVFSERVNQYLREREMFGAEED---PF--SVLTERELDVLHELAQGLSNKQIASV 177 G + + V L R + D PF VL++RE+DV+ +A G SN+QIA Sbjct: 121 VHAGHALLAPEVTGRL-IRHLAPPRPDHPHPFVGKVLSQREVDVVRLVALGRSNQQIADE 179 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L +S +TV+ ++R + KL+V R +L Sbjct: 180 LVLSLETVRTYLRRMFAKLDVNDRTQLAVL 209 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 115/198 (58%), Gaps = 5/198 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++I DDH L+R G++ LL+ EVV EA DG I + LD ++++LD+ M S Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + +++ + I+L++ D V + +GA YLLK++D E +++A++A + G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 127 SKVFSERVNQY----LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 K FS + L E+ A + LT+REL+VL E++ GLS K IA L IS Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIA-ETLTKRELEVLKEVSMGLSTKLIADKLFISV 183 Query: 183 QTVKVHIRNLLRKLNVRS 200 +TV+ H NL++KL+V + Sbjct: 184 RTVETHRINLMKKLDVHN 201 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 4/207 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH L+R G+ ++L DP EV+ EA G +AI + L DV+LLD+NM + Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNIG 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFA--LIDAGADGYLLKDSDPEVLLEAIRAGA 124 G++T LR+ ++ IL VS SS + L+ AG +GY+ K + + +++AI+ Sbjct: 62 GVETTKRLRQ--FDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVY 119 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 +GSK FS V + L + + EE PF L+ERE V + S +QIA L +S +T Sbjct: 120 QGSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKT 179 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 V + + K+ V S V T L ++ Sbjct: 180 VNTYRYRIFEKVGVDSDVKLTHLAMRH 206 >UniRef50_A4JJ97 Two component transcriptional regulator, LuxR family n=6 Tax=Proteobacteria RepID=A4JJ97_BURVG Length = 213 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 13/205 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR-LDIDVILLDLNMKGM 65 +++IVDDHP++R GV LL + VA+AG+ A+ + ++ D D I+LDL + GM Sbjct: 1 MKILIVDDHPILRDGVAALLRQNGEDVTVAQAGNADDAMRMLDQSADFDAIVLDLKLPGM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GLD ++A QII+L+ S+ ++DV A GA GY+ K + P +L AIR Sbjct: 61 NGLDAISAFAGKCPQLQIIVLSTSEDAADVRAAFARGALGYVPKSAGPHTVLSAIRMVLD 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV--------LTERELDVLHELAQGLSNKQIASV 177 G + V + + A P LT+R+++VL +A+G+ NK IA Sbjct: 121 GERY----VPPLMLDDSSSAAPGSPRPAPATRSAGPLTQRQIEVLRYVAEGVPNKVIADR 176 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRV 202 LN+SE+TVK H+ + + LNV +R Sbjct: 177 LNLSEKTVKAHVTAIFKALNVLNRT 201 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 121/209 (57%), Gaps = 9/209 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DD ++R G+ LL+L +V+A A +G A + A L+ D++L+D+ M + Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + ++++LT S+ + ++ GA GYLLKD + +++A+ G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 127 SKVF-----SERVNQYLREREMFGAE--EDPFSV--LTERELDVLHELAQGLSNKQIASV 177 V ++ +N++ RE+++ G E P + LTERE++VL EL GL+NK+IA Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATI 206 L I+E TVK H+ N++ KL VR R A I Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAI 210 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 10/212 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V++VDD P++R G+ +L+ V A DG A++ RL DV+L+D+ M Sbjct: 14 PISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRR 73 Query: 66 SGLDTLNALRRDGV----TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 GL L L R G+ +++++LT D + V + AGA G+LLK+S E L EA+R Sbjct: 74 DGLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVR 133 Query: 122 AGAKGSKVFSERVNQYLREREMFG------AEEDPFSVLTERELDVLHELAQGLSNKQIA 175 A A G S V + + E + G E LTERE+DVL + GLSN +IA Sbjct: 134 AAAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIA 193 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L +S TVK H+ +L K +SR A +L Sbjct: 194 GELVVSLHTVKTHVSRVLMKTGCQSRAQAAVL 225 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 10/203 (4%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++ +D ++R G+R++LE V+AEAGDGA A+ R DV+++D+ M + G Sbjct: 3 RILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L + +I+ILT+ D ++V++ I+AGA G+LLKD+ PE L+ AIR A G Sbjct: 63 LAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADGD 122 Query: 128 KVFSERVNQYLREREMFGAEEDP--------FSVLTERELDVLHELAQGLSNKQIASVLN 179 + S V + L F P LT RE +L + GLSN IA L Sbjct: 123 AMLSPSVTRRLLSH--FADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRV 202 +E TVK H+ LL KL+ +RV Sbjct: 181 ATESTVKGHVSRLLMKLDCENRV 203 >UniRef50_C5SMW9 Two component transcriptional regulator, LuxR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMW9_9CAUL Length = 239 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 18/210 (8%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++++D P +RR + L+E P + EAG A + L + D+I+LDL + SG Sbjct: 23 RLVLIEDDPFVRRHIATLIEAAPDMRLTGEAGSVAEGLSLLDT-GPDLIVLDLGLSDGSG 81 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ + + R+ G+ +I+ILTV + V + + AGADGY+LKDS L+ +IR G Sbjct: 82 LEIIKSARQQGLATRILILTVFGDETSVISALTAGADGYVLKDSAESELIGSIRHTLNGG 141 Query: 128 KVFSERVNQYL-------------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQI 174 S V YL E E+ AE+ P +T RE+++L LA+GLS K+ Sbjct: 142 SPISAPVAAYLLRHIRKDASLAVVAEPEL--AEDAPG--ITPREIELLSLLAKGLSYKEA 197 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAA 204 ASVL+IS TV H++ + RKL V SR A Sbjct: 198 ASVLDISHHTVGTHVKAIYRKLAVNSRSEA 227 >UniRef50_B9XAI5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAI5_9BACT Length = 226 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 118/214 (55%), Gaps = 11/214 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V IV+DH R + Q+ P +VVA + SA+ + +++L+D+N+ G S Sbjct: 5 IRVAIVEDHAGYRETLGQIFADTPDFKVVASCANAESALKQIPGANCNLVLMDINLPGQS 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR----A 122 G++ L AL+ + ++++LT D + ++F + AGADGYLLK LLEA+R Sbjct: 65 GIECLRALKAETPGLRVVMLTSYDDNENLFQSLTAGADGYLLKRVARARLLEALRDIVAG 124 Query: 123 GAKGSKVFSERVNQYLREREMFGAEE-------DPFSVLTERELDVLHELAQGLSNKQIA 175 GA S + R+ +Y M G D + LT RE +VL LA+G + K++A Sbjct: 125 GAPISPQMARRMVEYFHNLNMAGTPSPAQSKAADVTAELTAREREVLELLARGATPKEVA 184 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 + LNIS QTV+ +IR + KL+V +R A + +L Sbjct: 185 AELNISWQTVRNYIRFIYDKLHVHTRTDAVLKYL 218 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+IVDDH L R G+ +L +PG EVV EA +GA+A+D R +D++++DL M + G Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ ++ II++TV + + AG GYLLKD+ ++ A+R +G Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 128 KVFS-ERVNQYLREREMFGAEED--PFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + + V Q LR +D P LT RE VL L QG +N++IA L IS T Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQ 210 VKVH+ +++ KL V R A + L+ Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 15/214 (7%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+IVDDHPL R+G+R+L+E +VVAEA G AI A+ + L+D+ + G++GL Sbjct: 13 VLIVDDHPLFRQGLRRLIEEGGAFKVVAEATSGHEAIREADIHRPSIALIDIQLPGVTGL 72 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + L++ + IIIL++ +F + AGA +L KD + + L+ ++ +G + Sbjct: 73 NVARILKKQHPSMHIIILSMHVDDERLFEAVRAGASAFLTKDIEAQELISSLDRVVQGEQ 132 Query: 129 VFS-------ERVNQYLRE-REMFG--AEEDPFS-----VLTERELDVLHELAQGLSNKQ 173 + + E + L E R++ G E P S L+ RE++VL +AQGLSNK+ Sbjct: 133 LINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVAQGLSNKE 192 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 IA L I+EQTVK H+ ++LRKL V RV A + Sbjct: 193 IAEALFITEQTVKNHMTSVLRKLQVNDRVQAVLC 226 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 22/228 (9%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI--DVILLDLNM 62 T V+IVDD LMR+G+R+LLE++ G +VV +A DG A++ + D DV L+D M Sbjct: 2 TTVSVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDARM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G+ + +R + ++LT D VF + AGA GYLLKD PE L+ AIR Sbjct: 62 PRMDGVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIRR 121 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSV----------------LTERELDVLHELA 166 A+G V + L + E P +V L+ERE +V + Sbjct: 122 VARGETVLGGPAAELL----VAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVG 177 Query: 167 QGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 G +N+++A L I+E T K H+ ++LRKL +R R + ++RG Sbjct: 178 TGATNREVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRERRGG 225 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 116/202 (57%), Gaps = 8/202 (3%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GMS 66 +++I DDH ++R G +L EVVA A DG A DV++LDL+M G S Sbjct: 2 KIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGES 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + + +I+ILT+ D +F ++ +GA GY+LK+S E L+ A+R +G Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQG 121 Query: 127 S-----KVFSERVNQYLREREM--FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 K+ + VN+++ + + + DPF +L++REL++L +A+G NK IA L Sbjct: 122 ETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLF 181 Query: 180 ISEQTVKVHIRNLLRKLNVRSR 201 +S +TV+ H +++ KLN++S+ Sbjct: 182 VSVKTVEAHKTHIMTKLNLKSK 203 >UniRef50_Q4V0G8 Two-component system regulatory protein n=4 Tax=Xanthomonas RepID=Q4V0G8_XANC8 Length = 210 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 1/202 (0%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 + ++ + DD L+R +R LL+ G VV EA DG + +D ++DV+L D+ M G Sbjct: 2 SALRIALADDQVLVRAALRALLQ-QQGITVVCEADDGQALLDALATHNVDVVLSDIRMPG 60 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G+ L LR G +++LT D S + +AGA G+LLKD+ P+ L EAI A Sbjct: 61 LDGIAALEQLRARGDRTPVLLLTTFDDSELLLRACEAGAQGFLLKDAAPDDLHEAIARVA 120 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G + +R R F ++ P ERE+ +L LA G SNK+IA L ++E T Sbjct: 121 AGETLLQPVSTDPVRARYQFRDQQAPRETFNEREVAILRLLAGGYSNKEIARTLFLAEGT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATI 206 VK ++ +L KL R R A + Sbjct: 181 VKNYVSTILDKLGTRDRTRAVL 202 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 113/202 (55%), Gaps = 9/202 (4%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++VDDH ++R+G+R +LE +P EVV EA A+ + + DV+L+DL + S Sbjct: 21 KLVLVDDHAILRQGLRSVLEREPDLEVVGEASSMQEALAVVGDVAPDVVLMDLKLSAASD 80 Query: 68 LDTLNALRR----DGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 + L + DG +++ T D V A I AGA GY++KD D L+ AIRA Sbjct: 81 YEGLALCAQLSAADGTMGLLVLTTFLDEQLVVRA-IHAGARGYVVKDVDTTELVRAIRAV 139 Query: 124 AKGSKVFSER-VNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 ++G F R + +R + P LTEREL+VL LA+GLSN +I L IS Sbjct: 140 SRGESAFDSRSASAVIRS---LNGQTTPRDGLTERELEVLQLLAKGLSNAKIGERLFISA 196 Query: 183 QTVKVHIRNLLRKLNVRSRVAA 204 TVK H+ N++RKL+V R A Sbjct: 197 TTVKFHVSNIMRKLDVGRRAEA 218 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 13/208 (6%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRL-----DIDVILLDLNM 62 ++++ DDH L+RRGVR +L+ +P VV EAGDGA AI+ R ++D+ +LD+ M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M+GL L R +I+ILT+ D +F + AGA GY+LK L++A RA Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 123 GAKGSKVF-----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 +G S + YL E E+P + LT RE ++L +A+G S+++IA Sbjct: 149 AVRGEPFLYPGAISVLIRSYL---EQARQGEEPETPLTPREEEILKLVAEGHSSREIADT 205 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAAT 205 L IS +TV+ H N+L KL ++ R+ T Sbjct: 206 LFISVKTVERHRANILAKLGMKDRLELT 233 >UniRef50_Q21KE6 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q21KE6_SACD2 Length = 227 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 117/225 (52%), Gaps = 37/225 (16%) Query: 7 FQVMIVDDHPLMRRGVRQLLE-LDPGSEVVAEAGDGASAIDLANR-LDIDVILLDLNMKG 64 +V++V+DH L R GV +LE LDP +E+ G GA A LA + D ++LLD N+ Sbjct: 1 MKVLLVEDHLLFRDGVSLILERLDPNTEIT-PCGTGADAFALAQQHADFSLVLLDYNLPD 59 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 +GL+ L ++ T I++L+ + + + ++ AGA G++ K S +V++ AI+ Sbjct: 60 TTGLNCLAQIQAHLPTTPIVMLSAENKAELIQQVLAAGARGFITKTSPSDVMISAIKLVL 119 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSV-------------------------LTEREL 159 G + EM A PF+ LTER+L Sbjct: 120 SGGVYIPQ---------EMISALNMPFTAHSSDGITHAASPAPQTAPPATGDHQLTERQL 170 Query: 160 DVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAA 204 VLHE+ +GLSNK+IA LN+S TVKVH+ +LR+ NV++R A Sbjct: 171 HVLHEMLKGLSNKEIARELNMSPSTVKVHVAAILREFNVKNRTQA 215 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 104/188 (55%) Query: 11 IVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDT 70 + DDHP++R+ +RQ+L +P VVAEAGDG A+ LA D D+ LLD +M G SGL Sbjct: 1 MADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPGCSGLSL 60 Query: 71 LNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVF 130 + +RRD +++L+V D ++ AGA GYL K+ E L++AIRA G Sbjct: 61 IEHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGGTHV 120 Query: 131 SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIR 190 S V Q L + + P L++RE V+ L+ G +IA L++ +TV + Sbjct: 121 SAPVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVASYRH 180 Query: 191 NLLRKLNV 198 +LRKL + Sbjct: 181 RVLRKLGL 188 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 9/210 (4%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI----DVILLDLNMK 63 +V+++DDH L+R G+R L L PG EVV EA DG +A+ + D+++ D+ M+ Sbjct: 116 RVLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMR 175 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM G+ AL ++I+++ D V I AGA GY+LKD+ + LL AI+A Sbjct: 176 GMGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAIQAV 235 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G +S R+ R M P LT RE D+LH + +G +NK IA L +S + Sbjct: 236 LAGRVFYSARI-----ARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVR 290 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 TV+ H NL RKL + R +QQ G Sbjct: 291 TVETHRLNLKRKLGIEGRAELVKYAVQQLG 320 >UniRef50_D1BK57 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BK57_SANKS Length = 219 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 9/210 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD PL+RR +RQ+L+ DP VVAEA DG A+ DV+++DL M+ + Sbjct: 2 IRVLLVDDDPLVRRSLRQILDSDPRLTVVAEADDGDGAVPAVQAHHPDVVVMDLRMRRVH 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ A+RR +++ +T A V +DAGA G+LLKD+ P + EA+ A G Sbjct: 62 GVEATAAVRRLPDPPEVVAMTSFGADEQVLRALDAGARGFLLKDATPTAIKEAVHAVVAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHE--------LAQGLSNKQIASVL 178 S V +Y+ + + P RELD L + + GL+N +IA + Sbjct: 122 DASLSPAVARYVVD-HVTSDPHGPARAAASRELDGLTDRERAVALGVHAGLTNDEIAQRM 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +S TVK H+ ++L +L + RV IL Sbjct: 181 YVSAATVKTHLSSVLARLGLEGRVQLAILV 210 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 118/201 (58%), Gaps = 4/201 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P T ++ +VDDHPLMR G+R ++ +P EV+ EA D A+A +L D+++ D++ Sbjct: 37 PATTKTRIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIMKLRPDLVIADIS 96 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 ++G SG++ + ++ ++++++ D S ++ AGA Y++K +L+AIR Sbjct: 97 LRGNSGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIR 156 Query: 122 AGAKGSKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASV 177 G SERV + R + G E + P S L++REL++++ + +GL ++IA+ Sbjct: 157 RARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAK 216 Query: 178 LNISEQTVKVHIRNLLRKLNV 198 L +S +TV+ H ++ RKLN+ Sbjct: 217 LFLSIKTVETHRVHIKRKLNL 237 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 5/207 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 + ++VDDH L+R G+ +++ + + + G ++ + DVILLD+NM G Sbjct: 4 NKIRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPG 63 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 +G++TL L+ ++++LTV + + ID GAD Y+LK+S ++ AIR Sbjct: 64 KNGIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVY 123 Query: 125 KGSKVFSERVNQYL-----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G K + + + + + E + +LT REL++L+E+++GL NK+IA L Sbjct: 124 LGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLF 183 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATI 206 +SE+TVK +I ++ +K+ V RV ATI Sbjct: 184 LSEKTVKNYITSIFKKIEVEDRVQATI 210 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 7/206 (3%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+I DD ++R+G L P VV A G A + L DV+L+D+ M GL Sbjct: 4 VLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGDGL 63 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + + ++I++T D VF +D+GA G+LLKD+DPE L A+ A+G Sbjct: 64 TATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEGGS 123 Query: 129 VFSERVNQYL-------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 V S R+ L + M A L+ RE+DV+ L+QGL N IA L++ Sbjct: 124 VLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLSLE 183 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATIL 207 + TVK HI N+ +KL VR+RV I Sbjct: 184 QSTVKSHISNICKKLQVRTRVQIVIW 209 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 112/212 (52%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 + E + ++ IVDDH ++R G+RQ L VV EA +G AIDL +IDV+++DL Sbjct: 25 LKEGSMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDL 84 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G SGLD L LR I+IL+ LI GA GYL K+ +P+ ++EAI Sbjct: 85 SMPGQSGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAI 144 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R A G + + V L ++ + P L+ERE V +LA+G + IA L++ Sbjct: 145 RTIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSL 204 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S +TV + L+ K+ + S T L+ + Sbjct: 205 SVKTVSTYRTRLMEKMGLSSNSDLTYYALKNK 236 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD L+R G+ +L+ EV+ EA G A+ +A RL DV+ +D+ M G Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ +++ +I++T D VF ++AGA G LLKDS L+E +R A G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 127 SKV----FSERV-NQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + RV ++ R + +F + + VLT RELD + +L QG+SN +IA+ L + Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSE---VLTPRELDCVAQLCQGMSNNEIATTLFLE 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATIL 207 TVK H+ + + K +RV I Sbjct: 182 PSTVKTHLSSAMAKTGTHNRVQLVIW 207 >UniRef50_A0PL56 Nitrate/nitrite response regulator protein NarL n=21 Tax=Actinomycetales RepID=A0PL56_MYCUA Length = 216 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDHPL R GV + L L VV EA DGA+A++L DV LLD M M Sbjct: 9 VRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIETHLPDVALLDYRMPRMD 68 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G A+R +G+ ++++++ D S+ V+ + GA G+LLKDS +++A+ AKG Sbjct: 69 GAQVAAAVRSNGLPTRVLLISAHDESAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 128 Query: 127 SKVFSER-VNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V + V E A P VL+ RE +VLH +A+G S IA L ++ TV Sbjct: 129 RDVVAPSLVGGLAGEIRQRAAPMAP--VLSAREREVLHRIAKGQSIPAIAGELYVAPSTV 186 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H++ L KL V R AA ++Q Sbjct: 187 KTHVQRLYEKLGVSDRAAAVAEAMRQ 212 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH + R+G+ LL + AE GDGA+A++L L+ D+ +LD+ M + Sbjct: 2 IRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMPKLD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ A+ G+ + IILT+ D + AGA G++LKD E LL A+R A G Sbjct: 62 GISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S + E E P + LTERE ++L +A G +N+ IA L IS +TV Sbjct: 122 GTAISRAIQHAAIE------PEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVN 175 Query: 187 VHIRNLLRKLNVRS 200 H NL+ KLN+ S Sbjct: 176 NHRTNLMGKLNLHS 189 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 4/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++ DDH ++RRG+R L P +V EAG + ++ + DV+LLDLNM G S Sbjct: 2 IHVVLCDDHAVLRRGIRDTLTEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPGRS 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFAL--IDAGADGYLLKDSDPEVLLEAIRAGA 124 GL+ L++L+ + I +L VS D +AL + AGA GY K DP L+EA+R Sbjct: 62 GLEVLSSLKE--TDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVM 119 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 KG K + V Q L + A E P L+EREL L ++A G IA L +S +T Sbjct: 120 KGRKYLTPEVAQMLADSLAQPAPELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKT 179 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQR 212 V V+ +L KL + + T+ ++ + Sbjct: 180 VSVYRSRVLEKLKLSNNAELTVYAIRNQ 207 >UniRef50_C4RQT0 LuxR family two-component system transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQT0_9ACTO Length = 279 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P + +V + DDH L+R G+R++L +P VV EA G A+ LA RL DV+LLD+ Sbjct: 56 PVRSQIRVCLADDHTLLRDGIREMLSTEPEFAVVGEASSGPEAVALAVRLRPDVLLLDVE 115 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G + +RR ++I+LT+ D V L++AGA YLLK + L+ A+R Sbjct: 116 MPGPGAAAVIRQVRRTASETRVIVLTMHDDPDMVHELLEAGAVAYLLKTILRDDLVAAVR 175 Query: 122 AGAKGSK------VFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 + + V E V + R++ + LT REL+VL A+ +SN QIA Sbjct: 176 SVVRRPTQSVLLAVSRETVERLDRQKPRTNG-----TPLTSRELEVLRLTAEAMSNAQIA 230 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAA 204 S L I+E TVK H+ N+ KL SRV A Sbjct: 231 SRLFITEATVKRHLTNIYAKLQAVSRVDA 259 >UniRef50_P96686 Transcriptional regulatory protein ydfI n=5 Tax=Firmicutes RepID=YDFI_BACSU Length = 213 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 2/205 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+IVDDH ++R G++ L+E + ++ EA +G A+ LA+ L+ D+IL+DL M MSG Sbjct: 3 KVLIVDDHLVVREGLKLLIETNDQYTIIGEAENGKVAVRLADELEPDIILMDLYMPEMSG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ + ++ T IIILT + + I+ GA GYLLKD+ E L + A +G+ Sbjct: 63 LEAIKQIKEKHDTP-IIILTTYNEDHLMIEGIELGAKGYLLKDTSSETLFHTMDAAIRGN 121 Query: 128 KVFSERVNQYLREREMFGAEEDPFSV-LTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + + + L+E + ++ LTE+E+ VL +A+GL +K IA L +SE+TVK Sbjct: 122 VLLQPDILKRLQEIQFERMKKQRNETQLTEKEVIVLKAIAKGLKSKAIAFDLGVSERTVK 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 + ++ KL SR A + +Q+ Sbjct: 182 SRLTSIYNKLGANSRTEAVTIAMQK 206 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 1/202 (0%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +M+VDDH ++R G R LL+ EV+AEA DG A + D++++D+++ G SGL Sbjct: 7 IMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQSGL 66 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + +R+ A+I++ ++ S AGA GY+ K SDPE L+ AI AK Sbjct: 67 KAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAKNKH 126 Query: 129 VFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVH 188 S + Q L E G E+ LT RE ++L L SN+ IA +LNIS +TV Sbjct: 127 TLSADIAQAL-AMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVSNS 185 Query: 189 IRNLLRKLNVRSRVAATILFLQ 210 + +KL V S + T L ++ Sbjct: 186 HYIIKKKLGVSSDIELTRLAIK 207 >UniRef50_Q3SFT3 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFT3_THIDA Length = 224 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 9/207 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLL-ELDPGSEVVAEAGDGASAI-DLANRLDIDVILLDLNMKG 64 + ++ DDHPLMR GVRQ+L +L+P E++ +A D S A D+D+ ++DLNM G Sbjct: 11 LKTLLADDHPLMREGVRQVLSQLEPPVEII-DAHDYPSLFAQTALHADLDLAVVDLNMPG 69 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ ++ R +++L+ S++S D+ ++++AGA GY+ K + +L A++ Sbjct: 70 FVGVQGISQFRARFPDVPLVVLSASESSHDIRSVLEAGALGYIPKAASSATMLAALQQVL 129 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPF-----SVLTERELDVLHELAQGLSNKQIASVLN 179 G ++ +RE GA F S LT R+L+V LAQG +NK IA L Sbjct: 130 AG-DIYIPTCPPAVREDGPRGARTADFDALQHSGLTARQLEVARLLAQGCANKAIAGSLA 188 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATI 206 +SE TVKVHI + R L+V +R A + Sbjct: 189 MSESTVKVHIAAIFRALSVTNRTEAVL 215 >UniRef50_Q1J2K9 Two component transcriptional regulator, LuxR family n=2 Tax=Deinococcus RepID=Q1J2K9_DEIGD Length = 209 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MPE P +++IV+DH R G+R L L+ VVAEA G A+++ DV ++D+ Sbjct: 1 MPE--PIRILIVEDHAFTRDGLRASLNLEADLRVVAEARSGEEALEVLRGQAADVAIVDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + GM G+ L+R +I++LT D +VFA + +GAD Y LK + P++LL A+ Sbjct: 59 GLPGMDGIQAARELKRRWPELRIVMLTAHDLREEVFASLASGADAYCLKSARPDLLLLAV 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE-EDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 RA A GS +V ++ + G D + LT RELDVL +A GL+NK+IA+ L Sbjct: 119 RAAAAGSAYLDPQVAHHV----LGGVRAPDAGAPLTPRELDVLRLIADGLANKEIAAALE 174 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 IS TVK+H++ +L KL R A + L+ Sbjct: 175 ISVSTVKLHVQEILVKLQAADRTQAAVKALR 205 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 AT V++VDDHP++R+G R++LE VVAEA + A A D DV++LD++M Sbjct: 6 ATGISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMP 65 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G SGL+ + +R A+I++ T+ + + V A AGA G++ K S+P ++ AIR+ Sbjct: 66 GASGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSV 125 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A+G + S+ + L + + L ERE+++L + A G + +QIA+ LN+S + Sbjct: 126 ARGERAMSDDIAHILAD-DSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVK 184 Query: 184 TVKVHIRNLLRKLNVRS 200 TV+ + + K R+ Sbjct: 185 TVQNYHYLIKTKTGART 201 >UniRef50_Q1IK52 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=Q1IK52_ACIBL Length = 211 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 7/205 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++ V+DHP++R G+ ++ P +VA+A +G+ AI D+ L+DL + G+S Sbjct: 9 IRILSVEDHPVVREGLVSIIGSQPDMVLVAQATNGSDAIAQFRTHHPDITLMDLRLPGIS 68 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G D L ++R + A++IILT SD+ +++ + AGA Y+LK +L IR+ G Sbjct: 69 GTDALISIRGEFPRARVIILTTSDSHTEIDRALRAGAAAYILKSMPMNEMLAVIRSVHAG 128 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 ++ + V L E G E LT REL+VLH + G NKQIA L+ISE TV Sbjct: 129 ARHIPQEVASRLAEN--IGEES-----LTSRELEVLHLIRDGHRNKQIADELSISETTVN 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 HI+N++ K+ R A + +++ Sbjct: 182 FHIKNIVGKMGANDRTHAVTIAVRR 206 >UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodobacteraceae RepID=A3K876_9RHOB Length = 213 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 + V+I+DDHP++R G R+L++L PG ++V EA D SA L DV+++D+ + G S Sbjct: 4 YSVIIIDDHPVVREGYRRLIDLQPGLKIVGEAEDARSAYAAFRDLRPDVVVMDVTLPGAS 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + +R+ A+I++ T+ +++ I AGA Y+ K SDP+VL+EAI +G Sbjct: 64 GIEAIRHIRQYDDGARIVVFTMHLSAAFALKAIKAGATSYITKSSDPKVLVEAIFGALRG 123 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V S V + + R+ S L+ R+ ++L LA+G S ++IA L+IS++TV+ Sbjct: 124 QTVISPDVIEAI-ARDSISGIGTGLSDLSPRQTEILCLLARGWSAERIAGELSISQKTVR 182 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V + DDHP++ G+R LL DP E+V EA G+ A+ + + D DV ++D++M G++ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ + ++++LTV + ++ V L+ AGA GYLLK S E LL A+RA A G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 127 SKVFSERVNQYLREREMF---GAEEDPFS-VLTERELDVLHELAQGLSNKQIASVLNISE 182 V + G + +P + L+ RE DVL +AQG SNK+IA ++S Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 183 QTVKVHIRNLLRKLNVRSR 201 ++++ + KL +R+R Sbjct: 185 KSIETYKARAAEKLGLRTR 203 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 5/200 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH ++R G++ LL +P EV+ EA DG AID + L D++LLDL M ++ Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + L + +I++LT+ D + A++ GA GY+LK + LL AIR A+G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 127 SKVF-----SERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +E V ++L E L+EREL+VL LA G +N+ IA +L++S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 182 EQTVKVHIRNLLRKLNVRSR 201 +TV+ + ++ KL + R Sbjct: 185 VKTVETYKARVMEKLEMHKR 204 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 10/206 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++M VDDHPLM +G+ L++ P +V A+ D+ L+DL Sbjct: 5 MDPSAEIRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDL 64 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + +G+DT+ ++ ++ A+IIILT+ + ++ + +GA GY+LK+ PE LL+ I Sbjct: 65 RLPDGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVI 124 Query: 121 RAGAKGSKVFSERVNQYLRER--EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 R G K +R++ + + FG E LT RE +VL +++G SNK++ + L Sbjct: 125 RKVHSGEK---KRLHPVIAATLADHFGEEN-----LTSRETEVLQLISEGNSNKEVGNRL 176 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAA 204 +ISE+TVK H++N+L KL R A Sbjct: 177 SISEETVKGHVKNILGKLGANDRTQA 202 >UniRef50_A2SD01 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=A2SD01_METPP Length = 215 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 17/205 (8%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E V+++DDH ++R G RQL++ +P VVA A A + IDV ++DL Sbjct: 1 MREKCLIHVLLLDDHAVVRAGYRQLIDAEPDMCVVAACATSAQACEQLRLQQIDVAVVDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++K SGL + LR + +I++ T+ S + AGA GYL KDSDP+ +L+A+ Sbjct: 61 SLKDDSGLQAIQRLRARLASLRILVFTMHAQQSYALQALRAGALGYLTKDSDPQAMLDAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV--------LTERELDVLHELAQGLSNK 172 R A+G +VFS E+ A DP V LT RE DVL AQGL+ + Sbjct: 121 RQVAQGRRVFSS---------ELVEAMLDPLEVERGGPLRQLTPREFDVLRLAAQGLATR 171 Query: 173 QIASVLNISEQTVKVHIRNLLRKLN 197 IA +++ ++TV ++ + +KL Sbjct: 172 AIAEAMHLGDKTVLNYMSLIRQKLG 196 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 14/210 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDHP+ R G+ +LL L+ EVVA+A DG +D+ + + D++LLDL M G+ Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLD 82 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL TL L+ ++I+LT SD ++ + G G +LK + E+L+++IR G Sbjct: 83 GLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 127 -----SKVFSERVNQYLRERE---MFGAEEDP------FSVLTERELDVLHELAQGLSNK 172 S + + Q++ E M + P S L++RE +++ +AQG NK Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRV 202 ++A + ISEQTVK H+ N+ KL V R+ Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRL 232 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 17/218 (7%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD L+R G+ +L+ EVVAE +G AI+ A + D+IL+D+ M M Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 67 GLDTLNALRRD-GVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL +A+ D + +I+IL+ D ++ + GA G++LKD+ P+ L+ A+ A+ Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 126 GSKVFSERVNQYLREREMFG--AEEDPFSV--------LTERELDVLHELAQGLSNKQIA 175 G + + + +++ G AE P LT RE ++L LA G +N +IA Sbjct: 123 GGALLTPSIT-----KKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIA 177 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 S L I E TVK H+ +LL KL +R R A ++F + G Sbjct: 178 SRLFIGESTVKTHVSSLLSKLELRDR-AQAVIFAYENG 214 >UniRef50_D1SF65 Two component transcriptional regulator, LuxR family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SF65_9ACTO Length = 256 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 4/199 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +MIVD H L+R GVRQ+LE + VVAEAGD +A+ ++ + DV++LD+ + G Sbjct: 25 PTTLMIVDGHDLIRHGVRQILETEQDLSVVAEAGDSVTAVTVSMAVRPDVVVLDIEIPGG 84 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 + T+ +R +IIL++ D V L++ G GYL K L+ A+RA ++ Sbjct: 85 DPVGTVRRIREGSPDTAVIILSMLDGPELVRDLLEVGVRGYLHKSVARHDLVSAVRAVSR 144 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V++ + ++G ++ VL+ REL+VL A+GLSN QIA+ L+++E TV Sbjct: 145 DRARVVLGVSRSSLD-HVYGRRDE---VLSPRELEVLAATAEGLSNAQIATRLSLAETTV 200 Query: 186 KVHIRNLLRKLNVRSRVAA 204 K H+RN+ KL+ SR+ A Sbjct: 201 KRHLRNIFAKLSAVSRIDA 219 >UniRef50_C5T0X1 Two component transcriptional regulator, LuxR family (Fragment) n=2 Tax=Burkholderiales RepID=C5T0X1_ACIDE Length = 191 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 104/197 (52%), Gaps = 9/197 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI-DVILLDLNMKG 64 P +++VDDH L R G+R +++ P + + EAG A A L +LD D++LLD+ M G Sbjct: 2 PACLLLVDDHALFRTGLRLIVQDHPAVQTIHEAGTVAEACGL--KLDAADLVLLDIQMPG 59 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 MSGLD L LR+ A+I++++ S A + GADG+L K + E +L+AI Sbjct: 60 MSGLDGLRLLRQACPRARIVLVSASVAPDAIHEARVRGADGFLPKSASAEDILDAITCAL 119 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G F R LT R+LDVL +L G NK IA L +SE T Sbjct: 120 AGDPCFPAHCGNAPPLRAPVA------PALTARQLDVLLQLCTGKPNKVIARNLGLSENT 173 Query: 185 VKVHIRNLLRKLNVRSR 201 V+VH+ + +L V SR Sbjct: 174 VRVHVAAIFAQLGVNSR 190 >UniRef50_B1Y7F6 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderiales Genera incertae sedis RepID=B1Y7F6_LEPCP Length = 224 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 7/200 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAE---AGDGASAIDLANRLDIDVILL 58 P ATP+++ + DDH ++R G R+LLEL+P VVAE A A+ + A R +D+++L Sbjct: 12 PPATPWRIALADDHAIVRVGYRRLLELEPDLSVVAEYADADSAAADLCQARRTAVDLLIL 71 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 DL+M G SGLD L L+RD +++++++ D+++ V + AGA G++ K SDP+ L+ Sbjct: 72 DLSMPGRSGLDLLRQLQRDRPALKVLMVSMHDSAALVGQCLGAGACGFVAKSSDPQALIG 131 Query: 119 AIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A+R +G V + + R G P LT REL+VL L GL + A+ + Sbjct: 132 AVRQALRGEVVDTHGPSAPPRA----GRRPLPHEQLTGRELEVLQLLLAGLGVEVAAARI 187 Query: 179 NISEQTVKVHIRNLLRKLNV 198 +SE+TV + + +KL V Sbjct: 188 GLSEKTVSNYQTQIRQKLGV 207 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 1/197 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++ +VDDH L G+R +L+ + G EV A G G ++L DV+L D+ M GM Sbjct: 2 IRIALVDDHRLFLEGIRSILDREIGLEVHASVGQGVELLNLLKTTRADVVLTDIRMPGMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + R ++I LT+ D DV L+DAGA GYL+K+ + E L++AI A+G Sbjct: 62 GLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTVARG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S + + + ++ LT RE VL +AQG +++QIA L +S T+ Sbjct: 122 DYYLSRKFRPIYKNWKSQEPRQESVR-LTRRERQVLELIAQGRTSQQIAESLKLSRFTID 180 Query: 187 VHIRNLLRKLNVRSRVA 203 H +N+ +K+ +RS + Sbjct: 181 THRKNIHKKMGIRSNIG 197 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 1/196 (0%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++VDDH ++R G+R LLE P VV EA D +AI A L D+ILLDL++ SGL Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + +LR A+I++LT+ D V + AGA GY+LK + L+ AIRA +G Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 129 VFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 + + L E + + +P+ L+ERE +VL +A+G + +IA LN+S +TV+ Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 188 HIRNLLRKLNVRSRVA 203 + + KL +RSR A Sbjct: 184 YRTRGMEKLGLRSRAA 199 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 6/201 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+IVDDHPL R GV+ L+E + V EAG GA A+ LA L D++ +D+++ MSG Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ + + +I++L++ V AGA GY++K++ L++ A +G Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 128 KVFSERVNQYLREREMFGA------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +V+Q L + GA +++ + +LT RE VL +A+G S +QIA+ + +S Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELS 184 Query: 182 EQTVKVHIRNLLRKLNVRSRV 202 +TV+ H NL++KL+V S++ Sbjct: 185 PKTVENHRTNLMKKLDVHSKM 205 >UniRef50_A9B192 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B192_HERA2 Length = 219 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 7/213 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDDHP+ R GVR LLE EVV G G A +A +DV LLD+++ M Sbjct: 1 MRILIVDDHPVFREGVRALLETHDEMEVVGVLGHGRDAAVVAKDQFVDVALLDVSLPDMP 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G + ++ ++++LT +D + + + AGA GY+LK DP L+ I A A+G Sbjct: 61 GYEVCRSIVEASPRTRVLMLTANDTNDVIRQSLAAGAAGYVLKTEDPSRLISHISAVAQG 120 Query: 127 SKVFSERVNQYLREREMFGAE-------EDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 V + + Q + + + G + D + LTERE V A+G N IA L Sbjct: 121 ETVLAGPIAQKVVRQLLEGPQPTVSTKTNDALNALTERERQVFFLAAEGRRNSDIAQQLI 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +SE+T+K H+RN+ KL + ++ + +Q R Sbjct: 181 LSEETIKTHLRNIYSKLGLGNKAELRLFAVQAR 213 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 307 1e-82 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 297 2e-79 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 295 6e-79 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 292 8e-78 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 289 4e-77 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 287 2e-76 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 287 2e-76 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 286 3e-76 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 286 4e-76 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 284 2e-75 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 283 2e-75 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 283 4e-75 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 282 5e-75 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 282 6e-75 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 280 3e-74 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 279 3e-74 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 279 4e-74 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 278 7e-74 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 278 8e-74 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 277 1e-73 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 277 1e-73 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 277 2e-73 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 275 9e-73 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 274 1e-72 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 273 3e-72 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 272 4e-72 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 272 8e-72 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 272 8e-72 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 270 2e-71 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 270 3e-71 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 269 3e-71 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 269 4e-71 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 269 6e-71 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 268 1e-70 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 267 2e-70 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 267 2e-70 UniRef50_A3Y699 Putative two component system response regulator... 266 3e-70 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 266 4e-70 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 265 7e-70 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 265 7e-70 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 265 9e-70 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 264 1e-69 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 264 1e-69 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 264 2e-69 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 264 2e-69 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 263 3e-69 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 262 5e-69 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 262 6e-69 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 262 7e-69 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 262 8e-69 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 262 8e-69 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 260 2e-68 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 260 2e-68 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 260 2e-68 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 260 2e-68 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 260 2e-68 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 260 3e-68 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 260 3e-68 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 260 3e-68 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 259 5e-68 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 259 5e-68 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 258 7e-68 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 258 8e-68 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 258 1e-67 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 258 1e-67 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 257 2e-67 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 257 2e-67 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 257 2e-67 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 257 3e-67 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 257 3e-67 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 257 3e-67 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 256 3e-67 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 256 3e-67 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 256 4e-67 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 255 6e-67 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 255 8e-67 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 254 1e-66 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 254 1e-66 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 254 1e-66 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 254 2e-66 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 254 2e-66 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 254 2e-66 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 253 2e-66 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 253 2e-66 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 253 4e-66 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 253 4e-66 UniRef50_C1A730 NarL family two-component response regulator n=1... 253 4e-66 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 253 4e-66 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 253 4e-66 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 253 4e-66 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 252 8e-66 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 252 8e-66 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 252 9e-66 UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostri... 252 9e-66 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 251 1e-65 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 251 1e-65 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 251 1e-65 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 251 1e-65 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 251 2e-65 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 251 2e-65 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 250 2e-65 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 250 2e-65 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A5WD77 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 250 2e-65 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 250 2e-65 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 250 2e-65 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_B2JVP2 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 249 5e-65 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 249 6e-65 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 248 7e-65 UniRef50_UPI0001788591 two component transcriptional regulator, ... 248 7e-65 UniRef50_Q0HL36 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 248 9e-65 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 248 9e-65 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 248 1e-64 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 248 1e-64 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 248 1e-64 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 247 2e-64 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_C7MI23 Response regulator containing a CheY-like receiv... 247 3e-64 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 247 3e-64 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 246 4e-64 UniRef50_Q04VJ6 Receiver component of a two-component response r... 245 5e-64 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 245 5e-64 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 245 9e-64 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 245 1e-63 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 244 1e-63 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 244 1e-63 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 244 1e-63 UniRef50_C4DCC2 Response regulator containing a CheY-like receiv... 244 1e-63 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_C4RJG1 Two-component system response regulator receiver... 244 2e-63 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 244 2e-63 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 244 2e-63 UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Proteas... 244 2e-63 UniRef50_C3PHX2 Two-component system response regulator n=3 Tax=... 243 2e-63 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_B4D5C2 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 243 4e-63 UniRef50_Q4V0G8 Two-component system regulatory protein n=4 Tax=... 243 4e-63 Sequences not found previously or not previously below threshold: UniRef50_UPI0001789139 two component transcriptional regulator, ... 265 7e-70 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 255 1e-66 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 251 2e-65 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 244 2e-63 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 243 2e-63 UniRef50_C5D120 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 243 4e-63 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 307 bits (789), Expect = 1e-82, Method: Composition-based stats. Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL Sbjct: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI Sbjct: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI Sbjct: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ Sbjct: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 297 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 3/214 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++I DDH L+R G+R++LEL+P +VV EA G AI++ R VI++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM G++G++ +R++ I+ LT+ D + L+ +G GY+LKD E L++A+ Sbjct: 61 NMPGLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFS---VLTERELDVLHELAQGLSNKQIASV 177 A+G++V V Q + P LT RE ++L ++ G SN++IA Sbjct: 121 YQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARE 180 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L ISE+TVK H+ ++ K+ V R A + L+ Sbjct: 181 LFISEKTVKNHLTHIFHKIGVSDRTQAALYALKH 214 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 295 bits (757), Expect = 6e-79, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 125/223 (56%), Gaps = 13/223 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +++++DDH L R G++++L+ + EVVAE DG A+ L R DV+++D+NM + Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHV 95 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L ++IIL++ D S V + GA GYLLK+ D + L+EA+R A+ Sbjct: 96 NGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAE 155 Query: 126 GSKVFSERVN-------QYLREREMFGAEE------DPFSVLTERELDVLHELAQGLSNK 172 G +V + L E G E+ P+ +LT RE +VL LA G SNK Sbjct: 156 GGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNK 215 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 IA L ISE+TVK H+ N+L+KLNV R A ++ ++ + Sbjct: 216 GIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE 258 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 125/205 (60%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDDHPL+R G+R LLE G+EVV EAGDG AI L L+ DV+++DL M G+ Sbjct: 18 PIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGV 77 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L +++LT+S+ + VFA + AGA GY+LK +D + A+RA A+ Sbjct: 78 TGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVAR 137 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G V+ V + +R G E PF LT+RE ++L LA G SN +IA L +S++TV Sbjct: 138 GEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTV 197 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQ 210 K H+ ++ KL V R A + + Sbjct: 198 KNHLTSIFAKLQVADRTQAVVRARR 222 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 289 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 123/211 (58%), Gaps = 4/211 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V+I DDH L+R+G++Q++EL+P +V+ A DG A+ +L DV+LLD++M Sbjct: 10 KINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQ 69 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+ TL L+ T +II+LT + +F I+ GA+GY+LKD++ E L++AIR + Sbjct: 70 NGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQ 129 Query: 126 GSKVFSERVNQYLR----EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G + L RE+ + + LT RE +VL LA+G++NK+I L IS Sbjct: 130 GLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFIS 189 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 E+TVK H+ N+ +K+NV R A I + Sbjct: 190 EKTVKNHVSNIFKKINVNDRTQAAIYAYKHN 220 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 92/223 (41%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +P ++IVDDHPL R G+R LE +P +V EA DG+ A+ LA+ L DVIL+DL++ Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM+GL+ AL+R A +IILT+ +F I AGA Y KD +PE L++ I Sbjct: 61 GMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 124 AKGS----------KVFSERVNQYLREREMFGAEEDP-FSVLTERELDVLHELAQGLSNK 172 A+G + RV RE FS LT RE+++L +A+G SNK Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +IA LNIS+QTVK HI ++LRKL V R A I L+ + Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIK 223 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 6/213 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DDH L RRG+ +L +P ++VAEA DGA A+ A DV+LLD+ M Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKR 145 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ A++ +A+II+LT+SD +D++ I AGA GYLLK+ + + AIRA Sbjct: 146 TGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHG 205 Query: 126 GSKVFSERVNQYLREREMF------GAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G + S + L + P LTERE++VL +A+GL+N+ IA L Sbjct: 206 GQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLF 265 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 ISE TVK H+RN+L KL + SR+ A + ++++ Sbjct: 266 ISENTVKNHVRNILEKLQLHSRMEAVVYAVREK 298 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 123/206 (59%), Gaps = 1/206 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++V+DH ++RRG+ L+ E+V EA +G A+ DV+L+DL+M M Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ +++ T +I+IL+ V ++AGADGY LK+ PE L+ +I A + Sbjct: 74 DGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYE 133 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G+ F +V L R E +PFS+LT+RE +VL E+A+G SNK+IA+ L+I+EQTV Sbjct: 134 GNANFHPKVTPALLGRSAVKKE-NPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H+ N+L KL V R A + ++ Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKH 218 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 1/209 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +++VDDHP++R+G R+LLE + VV EA G AI A +L DVIL+D++M Sbjct: 12 TRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMP 71 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM+G++ A++ + I++LT D + VFAL++AGA GYLLK++ + LL A+RA Sbjct: 72 GMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131 Query: 124 AKGSKVFSERVNQYLRER-EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G V + + ER P L+ REL+VL A G +NK+IA L+IS Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +TV+VH+ N+ KL V SR A + +++ Sbjct: 192 RTVQVHLANIFSKLGVGSRTEAVLYGIKR 220 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 T +++I DDH L+R G+R++L ++P VV E +G A+D + +D++L+D+NM Sbjct: 3 TSIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPI 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M+G++ +++ II LT+ D +F LI G GY+LKD P+ L++ I A Sbjct: 63 MNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVA 122 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIASVLNI 180 +G + + + D LTERE++VL ++A+G SNK IA+ L I Sbjct: 123 QGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 SE+TVK H+ N+ +K+ V R A + ++++ Sbjct: 183 SEKTVKNHLTNIFQKIGVADRTQAALYAIKEK 214 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 283 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 114/205 (55%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH ++RRG+R LE+ EVV EA DG I A L DVIL+D+ M G Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L LR A+++I+T V + AGA GY+ KD DP+ L AIR+ G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + V L ++ G LT+RE +VL +A G SN++IA L +SE+TVK Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ N+L KL+V R A + ++ Sbjct: 188 THVSNILMKLDVADRTQAALWAVRH 212 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 2/213 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +V+IVDDH L R G+RQL+E DP EVV EA +G A+ + L DV+L+D+ Sbjct: 22 MGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDI 81 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM GM G+ A+ + +++LT+ D V I AGA YL+K+S PE LL AI Sbjct: 82 NMPGMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAI 141 Query: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A+G + L + + L++REL +L LAQG +N+QIA L Sbjct: 142 HVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADAL 201 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 N++E TVK ++ L +KL VR R A I + Sbjct: 202 NLAESTVKNNLSALFQKLGVRDRTQAVIYAISH 234 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 282 bits (724), Expect = 5e-75, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V++ +DH ++R+G+ LL +P EVV EA +G AI + L DV+L+D++M Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 ++G+D L++ +I+IL++ +F + AGA GYL+K S P L++AI A Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAA 120 Query: 124 AKGSKVFSERVNQ-----YLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G S +++ Y+++++ E +L+ RE +VL +A+G +N++IA L Sbjct: 121 HAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IS +TV+ H ++ +KL + T +++ Sbjct: 181 YISPKTVEAHRNHIQKKLGLNGTAELTKYAIRK 213 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 282 bits (723), Expect = 6e-75, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 120/219 (54%), Gaps = 9/219 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E ++++ DDH L R+G++++L+++ V EA +G +D L ++IL+D+ Sbjct: 4 MDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDI 63 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM ++G++ ++ ++I LT+ + +F ++ GA G+LLKD + L++AI Sbjct: 64 NMPLLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPF---------SVLTERELDVLHELAQGLSN 171 + KG+ + L A+ P S LT RE ++L +AQG +N Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 K+I+ L ISE+TVK H+ N+LRK++V R A I L+ Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 115/212 (54%), Gaps = 6/212 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +++P +++IVDD L+R+G++ +LE +P EVV +A +G A++L L DV+L+D+ M Sbjct: 5 KSSPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRM 64 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G + + ++++L+ D S + + AGA GYLLKD L +AIR Sbjct: 65 PEMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRF 124 Query: 123 GAKGSKVFSERVNQYLREREMFGAEED------PFSVLTERELDVLHELAQGLSNKQIAS 176 G G F + L E A + S +T RE +VL + G +N++IA Sbjct: 125 GHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQ 184 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 L I+E TVK H+ ++L +LN+++R I Sbjct: 185 QLYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+++DDH ++R G+ LE P EV+ EA DG+ + LA L DVIL+DL M+GM Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + R+ +II+LT V+ +I+AGA YLLK S + +AIRA +KG Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 127 SKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 +V + R E P LT+REL++L +A+G +NK+I L I+ +TV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K HI N+L KL+V R A + + Sbjct: 182 KTHITNILSKLDVSDRTQAAVYAHRNH 208 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 279 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DD L+R G R +L D G EVV EAGDG A+++A R DV+L+D+ M + Sbjct: 20 PLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKL 79 Query: 66 SGLDTLNALR---RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 GL+ L ++IILT D +F + AGA G+LLK++ PE L+E++R Sbjct: 80 DGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRI 139 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPF---SVLTERELDVLHELAQGLSNKQIASVLN 179 A+G + S V + + R A P S LT+RE +VL LA+G SN +IA L Sbjct: 140 VARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 + E TVK H+ +L KLN+R R A + + Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFAYEN 231 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 86/208 (41%), Positives = 121/208 (58%), Gaps = 3/208 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +V++ DDH L+R G+ +LLEL +VV EAGDG + D++LLDLNM Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ + ++ +++ILT+ D V+ +I +GA+GY+ KD PE L AI Sbjct: 61 RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 KG KVF +RE E+ L+ RE +VL LAQG+SNKQIA L ISE+ Sbjct: 121 IKGDKVFPRSTENEVREVV---NEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEK 177 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+ N+LRKL+V R A I+ L++ Sbjct: 178 TVKNHVSNILRKLSVNDRTQAVIVALKR 205 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 8/221 (3%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + + +V++VDDH L RRGV +L PG VV EAG+G AI+ L DV LLD++M Sbjct: 6 DESVIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 +GL+T +R +I++LTVS+ +F + +GA GY+LK PE L+E +R Sbjct: 66 PVCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQ 125 Query: 123 GAKGSKVFSERVNQYLREREMFGAE-----EDPFSVLTERELDVLHELAQGLSNKQIASV 177 +G V + + AE + + LTERE +VL L+ G SNK+IA Sbjct: 126 VYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARA 185 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ---RGAQ 215 L ISE TV+ H+R++L KL++ +R A ++ RG Q Sbjct: 186 LFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIARGRQ 226 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 120/207 (57%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDH +R +R +LE + VV EA G ++ D IL+D+N+ G + Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ ++++ ++++ T+ + + + AGADGYLLKDS E ++ AIR +G Sbjct: 65 GIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRG 124 Query: 127 SKVFSERVNQYLRE-REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V R+ + L + E + LTERE ++L EL +GLSNK+IA L IS++TV Sbjct: 125 DSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K+HI + +KLNV+SR A I ++ + Sbjct: 185 KIHINKIFKKLNVKSRSQAVIYAVRNQ 211 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 Q++I+DDH L R GV+++L ++P EVVA+ DG +A++L + + DVIL+D+NM Sbjct: 6 NENKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G++ L + ++++L++ D S V ++ GA GYLLK+ D + L+EA++ Sbjct: 66 PKVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKV 125 Query: 123 GAKGSKVFSERVNQYLREREMFGAEED----------------PFSVLTERELDVLHELA 166 A+G +V L + ED P +LT RE +VL + Sbjct: 126 VAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMT 185 Query: 167 QGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 G SN+ I L ISE+TVK H+ N+L+K+NV R A + ++ + Sbjct: 186 DGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWVK 234 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 119/210 (56%), Gaps = 7/210 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 ++++VDDH ++R+G+ LL PG EV+AEAGDG AI L D+ ++DL Sbjct: 5 THTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLR 64 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 + M+G++ + +R + A+I++LT D D++ + AGA GYLLK D + L AIR Sbjct: 65 LPRMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIR 124 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + G V + L ER S LT RELDVL + QG SN++IA+ L+IS Sbjct: 125 SVHAGKSRIPTVVAERLAERMSG-------SELTARELDVLRLIVQGRSNREIAADLHIS 177 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK HI NLL KL V R A LQ+ Sbjct: 178 EATVKTHINNLLSKLGVSDRTQAATTALQR 207 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 2/210 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M P +V++VDD ++R G++ + + P E+V EAG G +AI A L DVIL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM M G+ + R A+++ILT D + + + GA GYLLK++ PE +++I Sbjct: 62 NMPQMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 RAGAKGSKVFSERVNQYL--REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 + KG + Q L + + + F +T RE DVL +A G SN++I+ L Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +I+E+TVK H+ ++L ++ V+SR I Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 117/217 (53%), Gaps = 5/217 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + P +VMIV+D LMR G+R LL+L+ G EVV EA DG A++ +V+L+D+ M Sbjct: 2 SGPVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ + L R+ IILT D VF + AGA GY+LKD+ E L AI Sbjct: 62 RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKV 121 Query: 124 AKGSKVFSERVNQYL-----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 +G V + + R + + L+ERE++VL +A G SN++IA L Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 I+E TVK HI ++LRKL R R A + L++ + Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAALYALERGWIE 218 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 29/239 (12%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M TP +V++VDD PL+R G R +LE + +V EA DGA AI +D DV+L+D+ Sbjct: 1 MNGNTPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G++ A+ G A++IILT D FA + AGA +LLKD P L+ A+ Sbjct: 61 RMPVLDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMF-----------------------------GAEEDPF 151 R A G V + RV + L E + + Sbjct: 121 RVVASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLL 180 Query: 152 SVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 LT RE+++L +A+GLSN +IA +SE TVK H+R +L KL++R RV A + + Sbjct: 181 EALTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYE 239 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +A +V+I DDH + R+G+ ++ DP +VVA+A +G I L DV L+DL Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G+ ++A+ +A+II+LT D+ D++ + AGA GYLLK+++P+ LL AI Sbjct: 61 RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R +G K V L +R L+EREL+VL LAQG+SN IA L+I Sbjct: 121 RTVHRGHKYIPPDVGAKLVQRLSNP-------ELSERELEVLRSLAQGMSNADIADALSI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK H+ +L KL+V R A I+ +++ Sbjct: 174 GEGTVKSHVNRILNKLDVSDRTQAVIVAVKR 204 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +++P +++IVDDHP++R G+R + + + G EVV EA DGA A+ A DV+L+DL M Sbjct: 8 DSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRM 67 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G++ + LR + ++++LT D SDV I+AGA GYLLKD+ E L+ A+RA Sbjct: 68 PTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRA 127 Query: 123 GAKGSKVFSERVNQYLREREMFG--AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G V + V Q L R P LTEREL+VL +A G +N++ A L I Sbjct: 128 AAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFI 187 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 SE TVK H+ + K VR R AA ++ Sbjct: 188 SEATVKTHLLHAYAKFGVRDRAAAVAEAYKR 218 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH ++R GVR L +VV EA +G A+++ L D+IL+D+ M M Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + +R + +II LT +F I AGA GYLLKDS P+ LLEAIR +G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPF---SVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + + + E+ LT RELD L +A+G SNK IA + +SE Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H+ ++L KL++ +RV AT+ L++ Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALRE 212 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 129/209 (61%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDHPL+R G+R++LE + G +VV E GDG AI+++ LD D++L+DLNM G++ Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ +RR+ T I++LTV D+ VF ++ G GYLLKD DP+ L+++IR G Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + S V L + + + L++REL +L + +G SN++I L ISE+TVK Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 H+ ++ RKL V R A + ++ + Q Sbjct: 182 NHLSSIFRKLAVEDRTQAALKAVKLKLVQ 210 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 3/206 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DDH ++R+G+R EVV EA G A+ + D++L+DL+M M Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + + II+LT V + AGA Y LKD++PE L++ R G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 127 SKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 S + ++ + E++ + LT RE DVL E+A G SNK+IA+ L ISE+T Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQ 210 VK H+ NLL KL V R A + ++ Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVK 205 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 13/221 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++ DDH ++ +G+ L + P E+V EA +G A++ A L D++L+DLNM M Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++ ++++LT S + + GA GY+LKD +P+ L EAIR+ K Sbjct: 62 DGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYK 121 Query: 126 GSKVFSERVNQYLRERE----------MFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 G+ +++ L R + LT REL+VL L +GLSNK IA Sbjct: 122 GNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIA 181 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFL---QQRG 213 L ++E+TVK H+ ++L KL++ R A + Q +G Sbjct: 182 QTLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPLFQNKG 222 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 109/214 (50%), Gaps = 9/214 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R G+ LL EVV +AG+G A++L LD DV+L+D+ M M Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L G +I+LT V I AGA GYLLKD D VL ++IR A G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 127 SKVFSERVNQYLRER---------EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 + ++ L R + D S+LT RE D+L LAQG +N++I Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L +S TVK H+ + KL VR R A + + Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 A V++VDDH L R+ +R LLE +P V+ EAGDG SA LA R DVIL+D++M Sbjct: 19 PAKAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISM 78 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G+ G+ L+ +IIILT+ V I AGAD YLLK+S+ +++AIRA Sbjct: 79 PGVDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRA 138 Query: 123 GAKGSKVFSERVNQYLR---EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G V ++ L R EE+ + LTERE+ +L +A G+SNK+IA+ L+ Sbjct: 139 VARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELS 198 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ++E TVK + L KL+V+ R A I L Sbjct: 199 LAESTVKNRLSLLFEKLDVKDRTQAAIYALSH 230 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 115/214 (53%), Gaps = 4/214 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLA----NRLDIDVIL 57 P + +VMIVDDH ++R G++ L DPG EV+AEAGDG A++L D+IL Sbjct: 8 PRMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIIL 67 Query: 58 LDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 +DL M GM+G + +R +I+ILT V ++AGA Y+LK E L+ Sbjct: 68 MDLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELI 127 Query: 118 EAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 A++ +G V + V Q L + S +TERE +VL +A+G SNK IA Sbjct: 128 YALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEE 187 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L+IS +TVK H+ NLL K + R I +Q Sbjct: 188 LHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQ 221 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 3/207 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DD L R+G+ LLEL+ VV +A DG AI L L DVIL+D+ M Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + +I++LT D ++ + AGA GYLLK + L AIR G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 127 SKVFSERVNQYLREREMFGA---EEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + + E++ L++RELDVL+ + QG SN++I+ +L+++E Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK ++ LL L VR R A + Q Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 272 bits (697), Expect = 5e-72, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++ ++++ DDHP++ + + L+ + V+ AGDG A++L ++ DV L+DL Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G D + A+ A+I++LT D D++ + AGA GYLLK ++P LL+AI Sbjct: 63 RMPKMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R KG K + L ER L++REL+VL +A+G +N+QI++VLNI Sbjct: 123 RTVHKGQKYIPPTIAAKLAERMSS-------EELSDRELEVLRLIAKGKNNQQISNVLNI 175 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E TV+ H N+ KLNV R A + L + Sbjct: 176 AESTVRFHTNNIFGKLNVSDRTQALVTALNR 206 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 110/214 (51%), Gaps = 5/214 (2%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P +V+IVDD PL+RRG+ +L DP EVV EA +GA A+ LA RL DV+++D+ Sbjct: 6 PTLPRIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIR 65 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G+ L +++ L+ D V + AGA G+L KDS PE L AIR Sbjct: 66 MPVLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIR 125 Query: 122 AGAKGSKVFSER-----VNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 G + R ++ Y+R LT RE++V +A GL N I+ Sbjct: 126 TVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISR 185 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L+IS TVK +I ++ KL VR R A I+ + Sbjct: 186 TLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYE 219 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 4/213 (1%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +V + DD PL+R G R ++ V EAGDG I LA + DVIL+D+ M Sbjct: 2 NKDKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 SG++ + +I+ILT D VF I AGA GYLLKD+ PE L++AIRA Sbjct: 62 PRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRA 121 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVL----TERELDVLHELAQGLSNKQIASVL 178 A+G +F + ++ L T+REL+VL ++A GL N+ IA L Sbjct: 122 AARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +SE TVK H+ +L+K N + R A + ++ Sbjct: 182 FVSESTVKTHVHRILQKCNAQDRTQAVVFAIRN 214 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 143/213 (67%), Positives = 168/213 (78%), Gaps = 3/213 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PF+VMIVDDHPLMRRGVRQLLELD VVAEA +G+ AI LA R D+ILLDLN Sbjct: 6 STTAPFRVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLN 65 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 MKG+SGLDTL ALR +G+ A+IIILTVSDA SDV+AL+DAGAD YLLKDS+PE LL IR Sbjct: 66 MKGLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIR 125 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G VFSE V+ YL R DP + LTERELDVL E+ +G+SNKQIA+ L+IS Sbjct: 126 QAAEGRSVFSESVSAYLSTRSEIA---DPLADLTERELDVLQEVVRGMSNKQIAAQLHIS 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 E+TVKVHIRNLLRKLNVRSRVAAT+L+L+ + + Sbjct: 183 EETVKVHIRNLLRKLNVRSRVAATVLYLEYKNS 215 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 4/209 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DD ++R G+ +L L P EV+A A +G A+ L+ D+IL+DL M M+ Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + +I++LT D +F I AGA GYLLKD L+ AIR G Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIASVLNISE 182 V L + + P S LTEREL VL+ +A G +N IA L +SE Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H+ +L KL+V R A +L ++ Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVEH 210 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 83/217 (38%), Positives = 116/217 (53%), Gaps = 8/217 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P A+P +V+I DD L+R G R L+E P VVAEA DG +A+ + RL DV+L+D+ Sbjct: 21 PPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIR 80 Query: 62 MKGMSGLDTLNALRRDG--VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 M M+GL+ + D I+++T D VF + AGA G++LKD+ PE LL A Sbjct: 81 MPVMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 IRAGAKGSKVFSERVNQYLRER--EMFGAEEDPF----SVLTERELDVLHELAQGLSNKQ 173 IR A G + + V + L + P S LT+RE VL ++A G SN + Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 IA L +S TVK H+ +LL KL R R I + Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYE 237 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 2/212 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +V+I DDH L R G++ LLE + G ++V EA +G A++L + L D++L+DL Sbjct: 1433 MTNKTGLRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M M GLD + + D + ++I+LT S+ D+F I AGA G++ K+ + E + + Sbjct: 1492 SMPVMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLL 1551 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGL-SNKQIASVLN 179 R +G + R+ L + +LT+RE ++L L G+ S K ++ L Sbjct: 1552 RNVIRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLG 1611 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +SE TVK H+RN+L KL+++SR +Q Sbjct: 1612 VSEHTVKYHLRNILSKLHLQSRAQVVAWAVQH 1643 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 119/208 (57%), Gaps = 4/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++VDDH L+R G+R LLE P VV EA DG A+ L DV+L+D+ M M+ Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L A+RR+ ++++LT D S V + AG G+LLKD + L +AIR A G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIASVLNISE 182 + V + ++ +E P + LT REL+V+ +A+GLSN++IA+VL +E Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK N+L KL VR R A + ++ Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 +P +V+I DDHP+ R+G+R LLE G EVV EA G A+ LA L DV+++DL Sbjct: 4 LPGNEAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDL 62 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G +G++ + R +++LT+ VFA + AGA GYLLK+S E + A+ Sbjct: 63 HMPGGNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAV 122 Query: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 RA A G ++ + + + +M ++ F LTERE +VL +AQG SN +IA L Sbjct: 123 RAVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTL 182 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +S +TV+ H+ N+ KL+V R A +L + Sbjct: 183 FLSPKTVRNHVSNIFMKLHVADRAQAIVLARE 214 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 10/216 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + Q+++ DD L G++ LL LD E+V E +G A++ RL ++L+DL Sbjct: 1 MTDR--IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDL 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM M G+ A++++ ++ LT D VF + AG+ GYLLKD+ + L+EAI Sbjct: 59 NMPVMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAI 118 Query: 121 RAGAKGSKVFSERVNQYLRER--------EMFGAEEDPFSVLTERELDVLHELAQGLSNK 172 RA + G + + + A L++RE VL L++G SNK Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +IAS L+++E TVK H+ N+L KL V R A ++ Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMA 214 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 1/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDHP++R G+ +LE VV EAGDG A+ L DV+L+DL M G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + ++R A++++LT D + + AGA GYLLK + E + A+R +G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + V L R +P LT RELDVL +A+GL NK+IA L+I+E+TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H + RKL+V R A +Q+ Sbjct: 182 KFHANAIYRKLDVSGRTEAVSKAIQR 207 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 116/219 (52%), Gaps = 4/219 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI----DVI 56 M +VMIVDDH ++R G+R L L+P EVVAEAG G +AI + DVI Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVI 60 Query: 57 LLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVL 116 L+DL M GM G++T L + +II+LT V+ I+AGA Y+LK E L Sbjct: 61 LMDLMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 117 LEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 + A+ KG V + V+Q L + LTERE +VL +A+G SNK+I Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGE 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 L+IS +TVK H+ NLL K + R +L ++ + Sbjct: 181 ELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWVK 219 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 109/206 (52%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P ++++ DDH + R+G+R+LLE G +V EA G + A L D++LLD+ M + Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEI 64 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ L + ++I+LT+ +F I AGA YLLKD+D + L++ I + Sbjct: 65 DGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHR 124 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G V + + + + LTERE D+L LA+G N+ IA L +SE+TV Sbjct: 125 GEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 + + +KL V +R A ++ +Q+ Sbjct: 185 GNRLSEIFQKLGVSNRTQAALVAVQR 210 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 115/207 (55%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++IV+D LMR+G+R +L+L+ VV EA DGA + A RL D+IL+D+ M M+ Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + A+ A+II+LT D VF + AGA GYLLKD+ E LL+ IR G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQT 184 + G L+ERE +VL LAQGLSN++IA L+I+E T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H+ N+L KL +R A + ++ Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARRE 212 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 8/214 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +++I DDH ++R G +L EVVA A DG A DV++LDL+M G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SGL + + +I+ILT+ D +F ++ +GA GY+LK+S E L+ A+R + Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 126 GSKVFSERVNQYLRER-------EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G ++ L + + DPF +L++REL++L +A+G NK IA L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +S +TV+ H +++ KLN++S+ L+++ Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKK 214 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 5/214 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + ++++ DDH L R+GVR LL + EV EA + A+ LA +L DV+L+D+ M Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GMS + +R++ ++I L++ D + +D GA+GY+LKDS + L+ AIR Sbjct: 61 GMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREV 120 Query: 124 AKGSKVFSERVNQYL-----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 +G S R+ L + G F LT+RE ++L LA+G S K+IA+ Sbjct: 121 QRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFF 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +S +TV+ H NL+RKL++ ++ +Q++ Sbjct: 181 ELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKK 214 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 8/210 (3%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 ++ DD ++R G+ LL L PG EVV A DG A+ L DV+L+DL M G++ Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R++ Q+++LT +F + AGA GYL KD+ E +++AI A G Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 130 FSERVNQYLREREMFGA--------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 S +V + L ER + LT RE +VL +A+GLSN++IA L++S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK HI NL K R R A + Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGR 211 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 4/212 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +++VDDH L R G+ LL P VV EA G A++ A L DV+L+D+++ Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ G++ ++R ++++LTV D +F I AGA GYL+K+ LL+ +R Sbjct: 61 GIDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGL 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE----DPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G S R+ + E + +P L+ RE++VL +A LSNK+IA+ L+ Sbjct: 121 ARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLS 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ISE TVK H++N+L KL + SR A + Sbjct: 181 ISEHTVKNHLKNILAKLQLSSRRQAAAYAVAH 212 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP+ P ++++VDDH ++R G+ L L+ VV EAG+ A+ + DV+L+DL Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G +G LRR+ A++++ T D D++ + AGA GYLLK + E LL AI Sbjct: 61 RLPGANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G + S + Q L R ++RE +VL +A+G +NK+IA+ L I Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDV-------SDREREVLQLIARGKANKEIAAALGI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 SE+TVK H NL K+ V R AT +++ Sbjct: 174 SEETVKRHASNLFVKMGVADRAQATSEGIRR 204 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+ VDDH ++R G+ L EVV E G AI A+ L D+IL+DL M+ M Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++D ++++LT +V+ +DAG D Y+LK + + + +A+R ++G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 VF V +R R AE + +LTERE+++L +A+G SN++IAS +I+ +TVK Sbjct: 123 ESVFEPEVLVKMRNRMKKRAE--LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 H+ N+L KL V+ R A I Q Q Sbjct: 181 THVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 127/207 (61%), Gaps = 4/207 (1%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 ++VDD L RRG+ LL + G EVV EAGDG +LA DV+LLD+ M SG++ Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 A++ +A+II+LTVSD +D++ + +GA GYLLKDS E + +A+R A G + Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 130 FSERVNQYLREREMFGAEED----PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 S + L + + + P LTEREL+VL +A+G++N++IA L ISE TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K H+RN+L KL + SR+ A + ++++ Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEK 208 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 6/211 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD L+R G+ +L+ EVVAE +G AI+ A + D+IL+D+ M M Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 67 GLDTLNALR-RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL +A+ + +I+IL+ D ++ + GA G++LKD+ P+ L+ A+ A+ Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 126 GSKVFSERVNQYLRE-----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + + + + L + LT RE ++L LA G +N +IAS L I Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK H+ +LL KL +R R A I + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYEN 213 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 123/209 (58%), Gaps = 4/209 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH ++R+G+R LLE PG +V+ +A DG A+ LA DV+++D+ M G++ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + I+ L++ S V + AGA YLLKDS L+ A+ A ++G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 127 SKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 FS +++ L E M + ED + +LT RE +VL LA+G +NK++A++LN+S Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H N+L+KLN+ S + +++ Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYAIRK 212 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +V++ DDH ++R G R+L++ + G VV EA DG A++++ ++ DV+++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M ++G++ +++ T I+ILT ++ + A+++AGA +LLK+ LLEAI Sbjct: 61 AMPRLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAI 120 Query: 121 RAGAKGSKVFSE----RVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 RA G V RV L + E + LT+RE++VL A+G+SNK IA Sbjct: 121 RAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIAD 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L +S +T++ H+ N+ +KL+V SR A + L++ Sbjct: 181 QLYLSNRTIQTHLSNIFKKLSVGSRTEAILYGLKR 215 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 13/220 (5%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRL--DIDVILLDLN 61 + P +V +VDD ++R G R +++ P VVAEAGDG A+ + L DV+L+D+ Sbjct: 7 SGPIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVR 66 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M GL AL ++++LT D V I +GA G++LKD+ PE +L AIR Sbjct: 67 MPRMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIR 126 Query: 122 AGAKGSKVFSERVNQYLREREMFG-----------AEEDPFSVLTERELDVLHELAQGLS 170 G V + + L E + + LT+RE +VL +A+G S Sbjct: 127 TVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRS 186 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 N +IA+ L ++E TVK H+ +L KL+ R RV A +L + Sbjct: 187 NTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 8/209 (3%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 MIVDD L+R G+ LL L EVV A DG + +A +L ++IL+D+ M ++G++ Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R ++++LT + S +F ++ GA GYLLKD + + +++AI G V Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 130 FSERVNQYLREREMFGA--------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + + + + LTERE+DVL E+ GL+NK+IA L I+ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK H+ NL+ KL +R R A I ++ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVR 209 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 7/212 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR-LDIDVILLDLNMKGM 65 V+I DD P +R ++ L+ +DP EV A A G A+ L L DV+L+D+ M Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVC 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ +R ++++LT D + + GA GYLLK+ P+ +++ I+ Sbjct: 62 DGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHD 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASVLN 179 G+ + + + L + P S LT E V+ +A+GLSNK+IA+ L Sbjct: 122 GNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLY 181 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +SE TVK ++ +L KLN+R R I +L++ Sbjct: 182 LSEGTVKNYVTEILGKLNLRDRTQIAIFYLKK 213 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 12/218 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V+I DD ++R G++ +L L V+ EA +G I+L DVIL+D+ M + Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ ++ + ++IILT + +F I GADGYLLKD E ++ AIR+ G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 127 SKVFSERVNQYL-----------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 + + V + + F + + LT RE+DV +AQG SNK I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 L ++E TVK ++ +L KL + SR + + Q G Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVF-INQAG 218 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 V I DDH ++R+G ++ VV EA DG A DL R++ V+LLD++M G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL + D + +IIILT+ + + +F + GA GY+LK+S EVLL AIR A Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 126 GSKVFSERVNQYL---REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + Q L + AE++P+ L+ RE ++ LAQG +NK+ A L IS Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +TV+ H + KL V SR L L+ Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLALKYH 211 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 117/207 (56%), Gaps = 7/207 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +V++VDDHP MR G+ L+ PG +VVAEA DG AI++ + L DV+L+DL M G Sbjct: 18 ATIRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPG 77 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M G++ + A+R+ A++I+L+ D D+ + +GA YLLKD E + +RA Sbjct: 78 MGGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVY 137 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G V + L ER LTERE DVL L +G SNK+IAS L ISE T Sbjct: 138 AGDTSLPRSVAERLTERAQR-------EQLTERERDVLESLIKGRSNKEIASSLCISEDT 190 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H++ L KL VR R A I ++ Sbjct: 191 VKSHLKTLFAKLRVRDRTGAAIEAIRH 217 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 3/208 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +VM+VDDH ++R G++ L L P EVVAEA DG + A + DV+++DL M Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M+G++ AL ++ AQI+ILT + ++ +++AGA GY+LK S + +L AIR Sbjct: 61 KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G V + + E D LT RE ++L LA+G N++IA IS + Sbjct: 121 ALGEYAIETEVEKKV---EHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLK 177 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+ N+L KL V R A + Q Sbjct: 178 TVKTHVSNILSKLAVSDRTQAVVYAFQH 205 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 24/233 (10%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E+ P ++ +VDD PL+R G L+ VV +A DG +DLA + +D+IL+D+ M Sbjct: 7 ESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQM 66 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G+ + + ++I+LT D + V I AGA G+LLKD +PE LL AIR Sbjct: 67 ARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRT 126 Query: 123 GAKGSKVFSERVNQYLRER------------------------EMFGAEEDPFSVLTERE 158 G V S R+ + ++ A P + LT RE Sbjct: 127 VHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPRE 186 Query: 159 LDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +D+L +A G SN +I+ +S TVK H+R++L K R RV A + Sbjct: 187 MDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTH 239 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 3/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDHP++R G+ +L + E V +A DG A++L + DV+LLDL + +S Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + R + ++LT D + ++AGA GYLLKD+ PE + AIR+ +G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + + +R ED L++RELDVL L +G SNK IA LNISE T+K Sbjct: 122 GAALQSGIAARVLKRLATEPAED---ELSQRELDVLQLLVRGESNKAIALSLNISENTIK 178 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ ++ KL+VRSR A + LQ+ Sbjct: 179 SHVSHIFSKLDVRSRAEAVAVALQR 203 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 8/212 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD L+R ++ +L EVV GDG ++ +R+ DVIL+D+ M M Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ A++ +IIILT D +F+ + GA GY+LK E L EAI+ +G Sbjct: 62 GVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 127 SKVFSERVN--------QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 + + + Q + E+ ++ E ++ ++ G+SNK+IA+ L Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +SE TV+ ++ +L KLN+R R I +Q Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 118/206 (57%), Gaps = 1/206 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++VDDH ++ G LE +P EVVA A +G A++L DV+L+D++M M Sbjct: 8 PIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIM 67 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ ++ + ++++LT+ D + ++ AGA GY+LK+ +++AI+ + Sbjct: 68 NGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQ 127 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G+ F E L +E+ P + L+ RE +L +AQG S+K+IA++LNIS +TV Sbjct: 128 GATYFCESTTSTLFSQEILPVANKP-NPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 + H +N+ KL++ S LQ Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQH 212 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 123/228 (53%), Gaps = 15/228 (6%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E T ++ IVDDH L R G++++ +L+ VVAE G AI +A +++++D+NM Sbjct: 2 EMTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M+G++ L +++IL++ D S + ++AGA G+LLK+ L+ A+RA Sbjct: 62 PDMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRA 121 Query: 123 GAKGSKVFSERVNQYLREREMF---------------GAEEDPFSVLTERELDVLHELAQ 167 AK +V + + ++ + +L+ RE++VLH LA Sbjct: 122 VAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLAD 181 Query: 168 GLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 G SN+ I+ +L ISE+TVK H+ ++LRK++V R A + +++ + Sbjct: 182 GRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 10/216 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH L+R+G++++L + EVV EA DG A+ L D++LLD+NM G++ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GLD L++ +II LT+ D+ + V L+ GA GYLLKD +P VL++AI +G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 127 SKVFSERVNQYLREREMFGA----------EEDPFSVLTERELDVLHELAQGLSNKQIAS 176 + ++ + L +E LT RE+DVL +A+GLSN+ I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L +SE+TVK H+ ++ KL V R A + L+ + Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNK 218 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 QV +VDDHP + +G++ L G E+V +G+G AI +L+ +V ++DL + G++ Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ ++IIL+ + +V IDAGA Y++KDS PE L+EAI+A +G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V + V + + +R + LT RE +VL L +G SN+ IA L ISE TVK Sbjct: 122 EPVLTPGVAKKIMKRAARKGRKT--EPLTPREKEVLACLVRGNSNRDIAKTLCISETTVK 179 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 H+ N+L+KL+V+ R A I ++ Sbjct: 180 THVSNILKKLDVKDRTQAVIKAIENN 205 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 3/210 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + P +V++VDDH ++R+G+R L LD EVV EA +G A+ A RL DV+++DL Sbjct: 5 TPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLM 64 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M G+ LRR ++I LT + V IDAGA GY+LKD+ + L +AI Sbjct: 65 MPVMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIH 124 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A A+G + L + LT +E+ VL +A+G SN+ IA ++ Sbjct: 125 AAARGEVRLHPEAARRLVRDFRT---PEMRETLTPKEVIVLQLIARGYSNRDIARDQGVT 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK H+ LL KL + SR A + L+ Sbjct: 182 EATVKTHVSRLLGKLGLESRTQAALYALRH 211 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 124/208 (59%), Gaps = 5/208 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH ++R+GV +L EV+ EA +G A++L +L D++L+D+NM + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L++ +++ILTVS+ D+F I AGADGYLLK+ PE L+ ++RA G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 127 SKVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 S + + R+ + P L+ RE++VL + GL+ K+IA+ L ++E Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK H+R++L KL++R+R A ++ Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIR 207 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 4/209 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P ++++VDDH L+R G R +LE +P EVV EA G AI+L RL DV+++DL M G+ Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ ++ + ++++T + + + AGA GY+LK S ++ A+R Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 126 GSKVFSERVNQY----LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G ++ + L R G P LT RE +VL +A+G +N +IA L IS Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 T K H++N++RKL V R A + Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFE 218 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 12/220 (5%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E P +V +VDD L+R G+ L++ P VVAEAG G A+ + DV+L+D+ M Sbjct: 5 ETAPVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRM 64 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G++ AL R ++++LT D F I+AGA G+LLKD+ PE LL AIR Sbjct: 65 PEMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRT 124 Query: 123 GAKGSKVFSERVNQYLREREMFG------------AEEDPFSVLTERELDVLHELAQGLS 170 +G V + + L ++ + LT RE +VL +AQG + Sbjct: 125 VHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAA 184 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 N +IA+ L +SE TVK H+ +L KL R RV A ++ + Sbjct: 185 NLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHR 224 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 3/212 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + +V+IVDDH L R G+ +L +PG EVV EA +GA+A+D R +D++++DL Sbjct: 9 SSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQ 68 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G++ ++ II++TV + + AG GYLLKD+ ++ A+R Sbjct: 69 MPVIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVR 128 Query: 122 AGAKGSKVFSER-VNQYLREREMFGAEED--PFSVLTERELDVLHELAQGLSNKQIASVL 178 +G + V Q LR +D P LT RE VL L QG +N++IA L Sbjct: 129 QVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIAREL 188 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 IS TVKVH+ +++ KL V R A + L+ Sbjct: 189 IISPGTVKVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 1/210 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +MI DDH ++R G++ LLELD +V+AEA +G +D DV+LLD+NM M+ Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L AL+ ++++LTV + + + +D G +GY+LKDS+ L +AI A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 127 SKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + L + + E++ LT+RE++VL E+A G N+ IA + ISE+TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 K HI ++ +KL V R A + ++ Q Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNIIQ 212 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 1/211 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V ++DDH ++R G+RQ L EVV EAG A A+ L V +LD + Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 SG+D +R +ILT D +F+ I AGA GY+LK+ L+ AIR Sbjct: 93 DGSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTV 152 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G + + V + + ER G EDP + L +RE ++L +A GL+N+QI + L +SE Sbjct: 153 ASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSE 212 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +TVK ++ ++L KL + SR A + ++Q G Sbjct: 213 KTVKNYVSSILEKLGLASRTQAAVYLMKQTG 243 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 4/212 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+I DDH ++R G+ +LL + EVV EAGDG A+D+ + DV+L+D+ M Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 ++G++ ++++ + I+ILT + L++AGA GYLLK + + ++ AIRA Sbjct: 61 RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAI 120 Query: 124 AKGSKVFSERVNQYLREREMF----GAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G V + L ER + E+ L+ RE+++L ++GLSN++IA L Sbjct: 121 KAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLT 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +S +TVK H+ N+ K+ R A + ++ Sbjct: 181 LSMRTVKAHLSNIFNKMRCSCRTEAIVKGFRE 212 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 10/222 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++++ DD P +R+G+R +L++ +V+ EA G A+D+ R D++L+D+ Sbjct: 1 MQTEKMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G +G+ ++ ++++LT D VF I AGA GYLLKD++ + LL I Sbjct: 61 RMPGGTGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDP----------FSVLTERELDVLHELAQGLS 170 RA +G+ +F+ + ++ + ++P LTERE +VL LA G Sbjct: 121 RAMHRGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKR 180 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 N +I+++L ISE T K HI ++++KL R A + ++ + Sbjct: 181 NHEISAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMK 222 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 4/209 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++ DDH ++R G++ LLE + EVV EA DG A++L L V++ DL M GMS Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + ++IL++ + V + AGA Y+LKDS E L+ ++R +G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 127 SKVFSERVNQYLREREMFGAEE----DPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + S +++ E M + E DP+ LT RE +VLH +AQG + +IA L IS Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +TV+VH N++RKL++R++ LQ+ Sbjct: 182 RTVEVHRANMMRKLDLRNQTQLLRYALQR 210 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 120/209 (57%), Gaps = 5/209 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +P +V +VDDH ++RRG+ L P VV EA +G SA+ +A+ DVI++D+ M Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 64 G-MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G + G++T L+R IIIL+ + V + AGA Y+ K+S PE LLEAIR Sbjct: 61 GGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRG 120 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G V + + Q + E + A LTERE +VL +A+GL+N +IAS L +SE Sbjct: 121 AMAGKAVLAPALMQRILEAQTSKAA----DTLTEREREVLKLVAEGLTNAEIASRLTVSE 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +TVK H+ ++LRKL + R A I L+ Sbjct: 177 ETVKTHVASILRKLGLAHRTQAAIYALRH 205 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + Q+++VDD PL+RR +R L EL VV EA +G A+ RL +IL+D+NM Sbjct: 6 TSEIQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMP 64 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ L A++ + Q+IILTV + V I G Y+LKDS PE L+E + + Sbjct: 65 KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESV 124 Query: 124 AKGSKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G + L + G +LT RE +VL + GLSNK+IA LN Sbjct: 125 AEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLN 184 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 I+ +TVK H+ ++L KLNV R A +L +Q+ Q Sbjct: 185 ITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQ 220 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 124/214 (57%), Gaps = 4/214 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++T +++I +DH L+R+G++ L+ +VV EA +G +AI++ + D+ILLDL Sbjct: 1 MTQST-IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDL 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M M+GL T+ L+++ +I+++T+ + + + GADGYLLK DP+ L AI Sbjct: 60 SMPKMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGA---EEDPFSVLTERELDVLHELAQGLSNKQIASV 177 RA G S ++ L + DP + LT+RE +V +A+G +N+QIA + Sbjct: 120 RAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADL 179 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L IS +TV H NL++KL++ S + L+ Sbjct: 180 LFISPKTVDKHRTNLMKKLDLHSAREVSNFALKN 213 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 14/220 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD LMR G+R LL +++AEA +GA AI+LA L D+IL+D+ M M Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ AL + +++ILT V + +GA GY+LKD+ PE L+ A+RA A G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 127 SKVFSERVNQYLREREMFGAE--------------EDPFSVLTERELDVLHELAQGLSNK 172 ++ S + L R+ A DP LT RE ++ +AQG++N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 Q+A L +S TVK H+ + KL+V +RV +L ++R Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNERR 222 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R+G+R LEL G EV EA DGA + A L+ DVILLDL M G+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + LR G TA+++++T + I AGA GY+ KD DP L A+R+ G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 127 SKVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + V L + GA + LT RE +VL +AQG +N++IA L ++E+T Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H+ N+L KL V R A + ++ Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRH 214 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 6/201 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDHPL R+GV +L P +EV+AEAG G A+ +A L D++L+D+ M ++ Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + III+T+ + + VF+ + AGA GY+LKD++ E +L A+RA AKG Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 127 SKVFSERVNQYLREREMFGA------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 +FS V + + G F LT RE +VL L++G SN ++A L + Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 181 SEQTVKVHIRNLLRKLNVRSR 201 S +TV ++ N+L KL V R Sbjct: 184 SNKTVYNYVANILNKLQVSDR 204 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 1/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R ++ L++L+ VV A +G A + D+IL+D+ M M Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ + +IIILT + + GA GY+LK + ++E++R +KG Sbjct: 61 GVLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFS-VLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + VF + L E+ LTERE +++ + +GLSN++I++ L +SE TV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQ 210 + ++ LL KLNVR R I +L+ Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIFYLK 205 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD PL+R +R ++ + EA G A+ L L DV+L+DL M GM Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + R ++++LT D VF + AGA G+L+K+ + +L+A+R A G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 127 SKVFSERVNQYLRE-----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + + V + L + R P S +TERE +VL + +GLSN +IA L +S Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK +I LL KL R RV I + Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYE 211 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 2/208 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VM+ DDH ++R+G+ LL D VVAEA +G A++ A V ++D++M ++ Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + +I++LT+ + V ++ AGA GYLLKDS E L++A++A A G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 127 SKVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 +S+ L + +E DP+ LT+RE +V H + G + K IA L+IS +T Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQR 212 + H +L KL V + + Sbjct: 182 AENHRGKVLDKLGVSNTAELVRYAAKHN 209 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 6/211 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +VM+VDDH L+R G+R LLE + EVV E G A + LA +V+++DL + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L +++IL++ D VF +++GA GY+LK + E L AIR A+ Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 126 GSKVFSERVNQYLREREM-----FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G ++ + + E A LTEREL+VL A+GL+N +IA L I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 S +TV+ H N+++KL + RV ++ Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKN 213 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 3/207 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD L+R G+R L E EVV EA G +A+ LA L D++L+DL M GM Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + + + +++ LT D ++ + AGA G+L+KD+ P LLEAIR A G Sbjct: 62 GITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDP---FSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 FS V + + + + P LT RE +VL + G +N IA L++ Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK HI +L+ K +RV +L ++ Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLAVR 208 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 1/205 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+I DDH L+R G+R+LLELD +V+ E GDG AI++A + D+I++D+NM G G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 + ++R+ + +II LTV + V ++ AGA Y+LKD L++ I G Sbjct: 65 IVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 128 KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 V RV L LT+RE DVL L +G +NK++A V+ ISE+TVK Sbjct: 124 VVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVKN 183 Query: 188 HIRNLLRKLNVRSRVAATILFLQQR 212 H+ ++ RKL V+ R A I L+ R Sbjct: 184 HLTSIFRKLGVKDRTHAAIYALKNR 208 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 4/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++V+DH ++R G++ LL EVV E DG +A++ A RL DV+++D+NM + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ +R +++IL++ D V I AGA GYLLK S L+ AIR A G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 127 SKVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + FS V + L R DP LT+RE +VL + +G S+ +IA +L +S Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +T++ H ++ KL V + ++ Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIR 212 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 108/205 (52%), Gaps = 2/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++M+VDDH ++R G+R LL D +V EA +GA AI+LA + VIL+DL M + Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ AL+ +++II+LT V I AGA GYLLK+ L AIR A G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + L + A LTERE VL + GLSNK+IA L+++E TVK Sbjct: 125 QPFLHAEAQRTLMRQ--STAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVK 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 ++ +L KL V R A + ++ Sbjct: 183 GYVSTILTKLAVADRTQAALYAIKH 207 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 86/220 (39%), Positives = 117/220 (53%), Gaps = 9/220 (4%) Query: 1 MPEATP---FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVIL 57 MP+ P V++VDD PL+R+G+R +L PG EVV EA DG SA+ A RL DV L Sbjct: 1 MPDGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTL 60 Query: 58 LDLNMKGMSGLDTLNALRR-DGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVL 116 +D+ M GM G++ + D +++LT+ D VF + AGA G +LKD+ L Sbjct: 61 MDVQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSEL 120 Query: 117 LEAIRAGAKGSKVFSERVNQYLREREMFGA-----EEDPFSVLTERELDVLHELAQGLSN 171 + AI A A G + S V + L E D + LT RE DV L QGLS Sbjct: 121 VAAIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLST 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 + A L + + TVK H+++L RKL VR RV A I + Sbjct: 181 AEAAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEH 220 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 1/213 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++++ DDH L R G+R+LLE++ EV+ EA DG + +++ + L DV+L D++M Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ + L+ G + + + +T D + AL G D Y+LK S LL AIR+ Sbjct: 61 KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 +G +V L EE D S LT RE++VL+ ++QGL+N +IA + +SE Sbjct: 121 YRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSE 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +TVK H+ ++L+KL++ R A + ++ AQ Sbjct: 181 KTVKNHVSHILKKLDLVDRTQAAVFAWKRGLAQ 213 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +++I DDH ++R G+ L+ +P EVVAEA DGA A++L + + D+ L+DL Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M SG+ +R TA +++LT D D+ + AGA GY+LK S E L+ A+ Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G + + V L R + F L+ RE+ VL ELA+GL+NK+IA VLNI Sbjct: 121 RAVAAGQRWIPKEVANRLALR-------NSFEQLSPREVQVLSELARGLANKEIADVLNI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E T K H++++L KL V R A + LQ+ Sbjct: 174 TEHTTKDHLKSILAKLRVADRTEAVTVALQR 204 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 115/205 (56%), Gaps = 1/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VM+VDDH ++R+G+R LLELD EV EA A+ + + DVILLD + Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L+R +IIILT V I AGADGYLLK+ + E L+ I+A KG Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V V + L + + + LT +E+ +L ++ G +NK+IA ++ IS++TV+ Sbjct: 125 QSVLDPSVTEILFDN-IKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKTVR 183 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 ++ N+L+KLNV +R A +++ Sbjct: 184 NYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 115/221 (52%), Gaps = 18/221 (8%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++ +VDD L+R G R +L+ P VV EA DG SA+D + DV+L+D+ M + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 LDTLNAL--RRDGV---TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++ L R ++++LT D +A ++AGA G+LLKD+ PE LL AIRA Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 123 GAKGSKVFSERVNQYLREREMFG-------------AEEDPFSVLTERELDVLHELAQGL 169 A G V + + L ER + +E VLTERE +V +A GL Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 SN +IA L ++E T+K HI LL KL R RV I + Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 86/210 (40%), Positives = 119/210 (56%), Gaps = 2/210 (0%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 P +V+I DDH L+R G+R +L+ DPG EVV EA +G +A+DLA + DV++LD+ M Sbjct: 7 PTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITM 66 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 SGL LR ++++L++ D V + G GYLLKDS E L AIRA Sbjct: 67 PEESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRA 126 Query: 123 GAKGSKVFSERVNQYLREREMF--GAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G FS V + L E+ GA +LT RE DVL +A+GL+NK IA+ L I Sbjct: 127 VHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGI 186 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 S +TV+ H +L+RKL + S T L+ Sbjct: 187 SRRTVEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 85/221 (38%), Positives = 126/221 (57%), Gaps = 12/221 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I+DDHPL R+G+R LE EVV EA +G AI LA RL DV+L+D+N+ G++ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ ++R +I+++V + +F I GA Y KD P L+ IR A+G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 127 SKVFSERV-------NQYLREREMFGAEEDP-----FSVLTERELDVLHELAQGLSNKQI 174 + ++ V + L + A ED F+ LT RE+++L +A+GLSNK+I Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 AS L+IS QTVK HI ++L KL V R A I +Q+ + Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWIR 225 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 1/208 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +++++DDH L R G+++LLE++P + EA DG + L R DV+LLD+ M Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 + G+ + LR + + +T + + L G G++LK S LL AIR+ Sbjct: 61 NLDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A+G +V L +E D LT+RE +VL LAQGLSN +I++ +N+SE Sbjct: 121 ARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSE 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +TVK H+ ++L+KL++R R A IL + Sbjct: 181 KTVKNHVSHILKKLDLRDRTQAAILAWR 208 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD L+R G+ +L+ EV+ EA G A+ +A RL DV+ +D+ M G Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ +++ +I++T D VF ++AGA G LLKDS L+E +R A G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 127 SKVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + + + + VLT RELD + +L QG+SN +IA+ L + T Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK H+ + + K +RV I + Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWAFRN 211 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 7/210 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +V+I DDHP++ G+ ++ P VV +A G A+ LA + DVIL+DL Sbjct: 18 PEPGVIRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLR 77 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M GMSG++ +R + + +I+LT D+ + AGA YLLK LLEAIR Sbjct: 78 MPGMSGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIR 137 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + G F + + + A L+ RE+D+L + +GLSN++IA LNI+ Sbjct: 138 SVRTGHTYFPRAIRNSVPGKLNRAA-------LSPREMDILRLIVRGLSNQEIADALNIT 190 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+ +LR+L+V R A ++ +Q+ Sbjct: 191 RGTVKWHVNIILRRLDVNDRTQAVVVAVQR 220 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 115/204 (56%), Gaps = 3/204 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R+G+R +L LD +VV E +G A+ LA L DV+L+DL M M Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ +R+D +++ LT S + V + AGA G+LLK+++ + L A++A A G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S L + E LTERE +VL LA+G +NK+IA L I +QTVK Sbjct: 123 QIHVSPAAISRLMGQVR---EPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVK 179 Query: 187 VHIRNLLRKLNVRSRVAATILFLQ 210 ++ ++L KL V SR A + +Q Sbjct: 180 TYVSHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 7/207 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDHP++R G+ +L PG EVV EAGDG + LA+ L DV+LLDL M G Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L LR ++++ T D + + GA G LLK + + +A+R G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDD-ERLLEALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V + + + +E LT REL+VL +A+GL+N+++A L ISE+TVK Sbjct: 123 GSVIPPEITARVLKEMRGESEP-----LTPRELEVLRLVARGLTNREVARALFISERTVK 177 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRG 213 H+ +LL KL +R A + ++RG Sbjct: 178 FHVSSLLAKLRAENRTQAVAIA-RERG 203 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E+ ++++VDDHPL RRG+ LL + G E+VAEA DG + LA D++LLD+ Sbjct: 1 MTESN-IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDV 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M+G + L + +++LT+S+ + ++ ++ GA GY+LK++D + L+EAI Sbjct: 60 EMPVMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R G + S +N + + LT+RE DVL +A G+SNK IA + + Sbjct: 120 RQAVAGQQTVSPEMNN--AGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFL 177 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 SE TVK H++N+ RKLN+ +RV A + + Sbjct: 178 SENTVKAHMQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 112/212 (52%), Gaps = 2/212 (0%) Query: 1 MPEATP-FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 M E +V++ DDH L+ G+ L++ G VV EA G A+DLA DV+L+D Sbjct: 1 MTEPPATIRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMD 60 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 + M G+ G++ + T +++LT+ VFA + AGA GYLLK + + ++ Sbjct: 61 IEMPGIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRT 120 Query: 120 IRAGAKGSKVFSERVNQY-LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 I A A+G VF V LR AE PF LTERE +VL LA G N +IA L Sbjct: 121 IGAVARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 ++ +TV ++ N+L KL+ R AA + + Sbjct: 181 QLTPKTVANNVSNILAKLHAPDRTAAILRARR 212 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 5/208 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + P +V++ DDHP++R+G++ L++ P VVAEA DG A+ L + DV+LLDLNM Sbjct: 2 SEPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G L L A++I+LT + V + AGA G+L KD DP+ L +AIR+ Sbjct: 62 GSDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G +F+ + P + LT RE +VL +A G SN++IA L+++E+ Sbjct: 122 ADGQVIFAREAVTAM-----TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEK 176 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+ +L RKL V R A + + Sbjct: 177 TVKTHLSSLFRKLGVADRTQAALYAVTH 204 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 7/209 (3%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+IVDD L+R G + +L VV EA +G A + + L V+L+D+ M G+ Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 69 DTLNALR--RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 + ++++LT D V+ + AGA G++LKD++P+ ++ A+R A G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 127 SKVFSERVNQYLRE-----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + + L E R A LT+RE ++L +A+G+SN++IA L IS Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK H+ ++ KL+ R + + Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYE 253 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 8/214 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD PL+R G+ L+ L+P EVV EAGDG +A+ +A L D+ LD+ M G+ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLD 61 Query: 67 GLDTLNALRRDG--VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ L +++LT D VF ++AG G+LLKD++PE + AIR A Sbjct: 62 GIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVA 121 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASVL 178 G+ + + + + + P S LT RE ++L LAQG+SN +IA L Sbjct: 122 AGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 + TVK H+ +L KL VRSR+ A + Q R Sbjct: 182 VVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNR 215 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 121/207 (58%), Positives = 157/207 (75%), Gaps = 3/207 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+++DDHPLMRRG++QL+ELD EVVA+ G I +A + DVI+LDLNMKG+ Sbjct: 4 KLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGL 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SGLDTL LR +GV A+I+ILTVSDA +D++ LIDAGADGYLLKD++P+ LLE I+ A+ Sbjct: 64 SGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQ 123 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + S+ + L ER E++P LT+RE+ VL ++A GLSNKQIA+ L ISE+TV Sbjct: 124 GEVILSDSIKNLLLER---THEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETV 180 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 KVHIRNLLRKLNV SRVAAT+LF +Q Sbjct: 181 KVHIRNLLRKLNVHSRVAATVLFFEQN 207 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 111/199 (55%), Gaps = 6/199 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM-KGM 65 ++++ DDH ++R G+R LLE + EVV EA +A+ L +D++L+DL G Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG+D LR ++++T D +D+ + AGA GYLLKD+ P LL A+RA + Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G V S V L R P + L+ RE+ VL +A G SN++I L +SE TV Sbjct: 122 GDSVLSPAVASKLMTRVRR-----PATSLSPREIQVLTLVAAGRSNREIGKELFLSETTV 176 Query: 186 KVHIRNLLRKLNVRSRVAA 204 K H+ ++ KL V+SR +A Sbjct: 177 KSHLVHIFGKLGVKSRTSA 195 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 107/206 (51%), Gaps = 5/206 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+IVDDHP++ G++ +LE EVV G AI A L DVIL+DLNM + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL ++ +++IL++ D+ + + GA GY+LKD PE + AI A + Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + L + LT RE +L ELAQG SNK++A L+IS +TV Sbjct: 143 GEQYLCTGAAGSL-----SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 + H +N+ RKL + S T L+ Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEH 223 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 104/215 (48%), Gaps = 9/215 (4%) Query: 1 MPEATPF--QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILL 58 M A P +++IVDD L+R G+R +L DPG VVAE G A+ L DV+L+ Sbjct: 1 MNTAAPTQRRIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLM 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M GL + A +++LT D + + AGA G+LLKD+ P L+ Sbjct: 61 DIRMPVRDGLSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVR 120 Query: 119 AIRAGAKGSKVFSERVNQYLRER-------EMFGAEEDPFSVLTERELDVLHELAQGLSN 171 A+ G S V L + LTERELDV ++AQG SN Sbjct: 121 AVNLAGDGHPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSN 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 ++I+ L +S TVK HI + K +V +RV I Sbjct: 181 QEISQTLYMSIPTVKTHISRIFTKFDVDNRVQIAI 215 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 7/214 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR-----LDIDVILL 58 ++++ DDH L+RRGVR +L+ +P VV EAGDGA AI+ R ++D+ +L Sbjct: 25 PAKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M M+GL L R +I+ILT+ D +F + AGA GY+LK L++ Sbjct: 85 DVAMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 119 AIRAGAKGSKVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIAS 176 A RA +G L + A E+P + LT RE ++L +A+G S+++IA Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L IS +TV+ H N+L KL ++ R+ T ++ Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYAIR 238 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 105/213 (49%), Gaps = 7/213 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V+I DD ++R+G L P VV A G A + L DV+L+D+ M Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + + ++I++T D VF +D+GA G+LLKD+DPE L A+ A+G Sbjct: 62 GLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEG 121 Query: 127 SKVFSERVNQYLR-------EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 V S R+ L M A L+ RE+DV+ L+QGL N IA L+ Sbjct: 122 GSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLS 181 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 + + TVK HI N+ +KL VR+RV I + Sbjct: 182 LEQSTVKSHISNICKKLQVRTRVQIVIWAYRNN 214 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++ DDH ++R G+R LLE VVAEA +G I LA L ++I++D++M M+ Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + D ++I L++ V +++AGA GYLLKD E L+ AI+ Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPF---SVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 S + + + + A S LT RE ++L LA+GLS KQIA+ L++S + Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H RN+ +KL V S +++ Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIRE 210 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 9/213 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DD ++R G+ LL+L +V+A A +G A + A L+ D++L+D+ M + Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + ++++LT S+ + ++ GA GYLLKD + +++A+ G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 127 SKVFSERVNQYLREREMFGAE---------EDPFSVLTERELDVLHELAQGLSNKQIASV 177 V + + + + LTERE++VL EL GL+NK+IA Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L I+E TVK H+ N++ KL VR R A I ++ Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIYSVR 214 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +++VDD L+R G++ +L EVV AGDG A+ L D+ V+L+D+ M Sbjct: 1 MNKTNIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ ++ +I+ILT + + + GA GYLLKDS E++ E I+A Sbjct: 61 NCDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKAC 120 Query: 124 AKGSKVFSERVNQYLR-----EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 KG+ V V + E+E+ + + LTERE++++ ++A GLSNK+IA + Sbjct: 121 VKGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKI 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +SE T+K +I +L KL++R R I + Sbjct: 181 YLSEGTIKNNISTILSKLDLRDRTQIAIFAFKNN 214 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 113/210 (53%), Gaps = 6/210 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R GVR +L DP EVVAEAGDG AIDL DV+LLD+ M M Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + LRR +++LT + + GA G+LLK DP LL I A A+G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 127 SKVFSERVNQYLREREMFG------AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 + S RV + + G A + + LT RE DVL + +GLSN QIA L + Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK H+ +L +L R+RV A IL + Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHE 211 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +V++VDDH ++R+G+R L LD G EVV EA +G A+ A RL +V+++DL Sbjct: 9 MTTPT-VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDL 67 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G+ LRR ++I LT + + V I+AGA Y+LKD+ + L +AI Sbjct: 68 MMPVMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAI 127 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A A+G + L + LT +E VL LA+G SNK IA+ + Sbjct: 128 HAAARGEVRLHPEAARRLVRDFR---SPEMRESLTPKETAVLQLLARGQSNKDIAAEQGV 184 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 SE TVK H+ LL KL + SR A + L+ Sbjct: 185 SEATVKTHVSRLLSKLGLDSRTQAALYALK 214 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 7/213 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP +V++ DDH ++R+G+R LL + ++V EAG G A+ +A +L DVIL+D+ Sbjct: 28 MPN---IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDI 84 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M+GL+ + +A++++L+ V L +AGA GYL+K + L+ A+ Sbjct: 85 AMPLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 RAGAKGSKVFSERVNQYLRER----EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 R KG+ FS + + LR++ G LTEREL+ L + G NK IA Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 + IS +TV+ H + ++ KLN+ + T + Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIHEVASLTRYAI 237 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 1/201 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +V++ DDH L+R G+R L P EVV EA +G A+ LA+ L DV+L+D++M Sbjct: 2 TKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M+GL+ +R+ ++IL++ D S V ++ AGA GY+LKD ++ AI + Sbjct: 62 VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G FS V L EDP+ LT+RE VL +A+GL NK++A L IS + Sbjct: 122 ASGGYYFSSAVGPTLVGTATSAPIEDPYG-LTDRERQVLTAIAKGLPNKEVAKSLGISVR 180 Query: 184 TVKVHIRNLLRKLNVRSRVAA 204 TV+ H NL K+ ++ Sbjct: 181 TVESHRLNLREKVGNKNAAQL 201 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 7/218 (3%) Query: 1 MP---EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVIL 57 MP +V++ DDHP++R+G+ L E+V EA DG + L +++L Sbjct: 10 MPVSKRKKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVL 69 Query: 58 LDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 +DL+M MSGL+ +RR+ +++IL++ V +I +GA GY+LKD+ L+ Sbjct: 70 MDLDMPTMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELV 129 Query: 118 EAIRAGAKGSKVFSERVNQYLRER----EMFGAEEDPFSVLTERELDVLHELAQGLSNKQ 173 AI + G FS ++Q + ++ G E LT RE +VL +A+G SNK+ Sbjct: 130 RAIESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKE 189 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +AS + + +TV+ H ++ KL++ + T + Sbjct: 190 MASRMGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAH 227 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 5/207 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +A V++VDDH L R G R++LE +VV +A G A+ + NRL V+L+D+ + Sbjct: 2 KAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRL 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 GM+G++ +R +++I+T D V D GA GYL K + L+EA+RA Sbjct: 62 PGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRA 121 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G+ V + L + P + LT+RE VL LA+G+ NKQIAS L IS Sbjct: 122 VAGGNSVLQPTLMAALLAK-----RSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFL 209 +TV+ H + KL V SR A + + Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRAI 203 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 5/207 (2%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +V++ DDHP++R G+ +L ++ EVV EA DG A+DLA L DV++ DL Sbjct: 24 PERPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLR 83 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G+ + T ++++LT + ++ ++AGA GYLLKD+ L+ IR Sbjct: 84 MPVLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIR 143 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G V + V L + A LT RE++VL +A+GLSN + L IS Sbjct: 144 EAARGQTVLTPSVATRLVSQVGSRA-----DRLTPREVEVLRAVARGLSNAAVGHELFIS 198 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILF 208 E TVK H+ KL V R A + Sbjct: 199 ETTVKTHLIRAFGKLGVNDRTHAVTVA 225 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 6/209 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++ +D ++R G+R++LE V+AEAGDGA A+ R DV+++D+ M + G Sbjct: 3 RILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L + +I+ILT+ D ++V++ I+AGA G+LLKD+ PE L+ AIR A G Sbjct: 63 LAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADGD 122 Query: 128 KVFSERVNQYL------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + S V + L R LT RE +L + GLSN IA L + Sbjct: 123 AMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGAT 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK H+ LL KL+ +RV ++ Sbjct: 183 ESTVKGHVSRLLMKLDCENRVQLALIAHN 211 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 8/218 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P +V++VDD L R G+ +++ G EVV +A DG+ A+ + + L DV+L+D+ Sbjct: 29 PGTPRIRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVR 88 Query: 62 MKGMSGLDTLNAL------RRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEV 115 M + G++ + ++I+LT D A I GA G+LLKD+ P + Sbjct: 89 MPELDGVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAM 148 Query: 116 LLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDP--FSVLTERELDVLHELAQGLSNKQ 173 L +AIR G+ V + L + P LT +E +VL +A GL+N + Sbjct: 149 LRDAIRTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAE 208 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IA +SE TVK H+ +LRKL +R RV +L + Sbjct: 209 IARRAFVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEH 246 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 116/208 (55%), Gaps = 4/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH L R +R LLE G EVV EA G A++LA L DV+L+DL M GM Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + + ++++LT S+ D+F + +GA GY+ KD + E + A ++G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 127 SKVFSERVNQYLREREMFGA--EEDPFSVLTERELDVLHELAQGL-SNKQIASVLNISEQ 183 F+ + + L A E VLTERE ++L L QG+ SNK++A L +SE Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK H+RN+L KL++++R LQ Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYALQH 207 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ +D ++R+G++ ++E D +V EA DG A+ L DV +LD+ M M Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +R +I++LT D V + G +GY+LK+ D E L+ +I++ G Sbjct: 62 GIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV-LTERELDVLHELAQGLSNKQIASVLNISEQTV 185 ++V + + EE LT RE +L + +GL+NK+IA L +S TV Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K ++ KL +R R I ++ R Sbjct: 182 KNQTSHIFDKLALRDRTQLAIYAIRHR 208 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 4/207 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 ++I +DH L+R G++ LL+ P V EA DG A+DL +R +++L+D++M M G+ Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 +++ ++++LTV A V+A + AGADGY+LKD+ + + A+ + G Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 129 VFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 S V+ + + + A + LT RE ++ +A+G N++IA +L +S +T Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 V+ H NL++KL V S L L++ Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALER 213 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 119/220 (54%), Gaps = 8/220 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP++ PF+V + DDHPL+R G+R L + + EA DG A++ + DV L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G+SG+ + LR+ ++IL+ + + AGADGY+LK D L + I Sbjct: 61 DMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV--------LTERELDVLHELAQGLSNK 172 RA + G S + + EE+ + LT RE +L LAQG NK Sbjct: 121 RAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNK 180 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +I++ L IS +TVK HI+N+ +KL V+SR+ A I +++ Sbjct: 181 EISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKK 220 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 104/206 (50%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V I DDHP++R+G++QLL + V EA G ID R DV +LD M G Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + LR+ +++L+V ++ AGA GYL K+S PE L+ AIR A+G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + S + + L G +E L++RE ++ LA G +IA L +S T+ Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 + + +L KL+++S + + Sbjct: 183 TYRKRILEKLDLKSNAELMRYAIGHQ 208 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 2/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH ++R GV+ LL EVVAEAG+G A+ +A + DV ++D+ M M Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + DG + +++ L++ S V ++ GA G+LLKD L+EA+R G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 127 SKVFSERVNQYLREREMFG-AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 ++ + + + + D LT RE ++L LA+G +N+++A L++S +TV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 H ++++ KL +++ ++ Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRN 207 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 7/208 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+IVDDH +MR G+ + + + +V EA +G ++ + DV+ +D + Sbjct: 2 KRKIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G ++ LR + A++++L+V + D++ ++AGA GY+ K ++ E +LEAIR Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G F + L R A LT RE VLH + GLSNK+IA+ L++SE Sbjct: 122 VGGETYFPAPIASKLASRRTRDA-------LTPREHQVLHHIVAGLSNKEIAAALHMSEA 174 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK+HI N L KL+V R A I+ +Q+ Sbjct: 175 TVKLHISNTLAKLHVADRTQAAIVAVQR 202 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 2/210 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++IV+DH LMR G+RQ+L P EV EA DG A+ LA L D++L+DL + MSG Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSD--PEVLLEAIRAGAK 125 + L+R+ +++ LT D VF + AGADGY LK + LL A+ + Sbjct: 63 TEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVRD 122 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G+ + + + + L+ERE++VL +A GL+N +I L I+ TV Sbjct: 123 GAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASGTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +VH+ N++ KL V RV A + L++ + Sbjct: 183 RVHVSNIIAKLGVNDRVQAAVRALREGWIR 212 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 23/232 (9%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +VMI DD ++ ++ +++L+ EVVA + +G ++++ +L D+IL+D+ M Sbjct: 1 MSKIKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G++ L+ +IIILT D + + GA GYLLKD D + L+ +IR Sbjct: 61 KMDGVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDA 120 Query: 124 AKGSKVFSERVNQYL----------------------REREMFGAEEDPFSVLTERELDV 161 + + L ++R+ E + + LT+RE+++ Sbjct: 121 YNDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEI 180 Query: 162 LHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 + GLSNK+IA L I++ TVK +I N+ KL V+ R +A +L+LQ+ G Sbjct: 181 AQLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSA-VLYLQKLG 231 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 2/210 (0%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + P ++++ DDH ++R+G+ LL + VVAEA DG A++ A + +D+ LLDL+M Sbjct: 4 KKEPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSM 63 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M GL+ L L+ +++ILT+ V + AGA+GYL KD+ L A+R Sbjct: 64 PHMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRT 123 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G + ER + L + + EE + L+ RE +VL + G S IA L +S Sbjct: 124 VAAGGRYLGEREAELLIDGALEEPEEP--AALSTREREVLELIVHGYSLSTIADKLYLSI 181 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +TV + LL+KL+ L+ Sbjct: 182 KTVSTYKTRLLQKLDCTQNSELVDYALRHN 211 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 5/213 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP P ++++ DDH L+R G+R LLE PG +V EAGDG + L + D+ ++D+ Sbjct: 1 MP--APLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G++G D + R+ +++IL++ A V + AGA GYLLKD+ L A+ Sbjct: 59 TMPGLNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLAL 118 Query: 121 RAGAKGSKVFSERVNQYLRER---EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 A KG S +++ + R + +P LT R +++ +A+G S K+IA + Sbjct: 119 NAVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFL 178 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 LN+S +T++ H +L+ +L + L+ Sbjct: 179 LNLSVKTIETHRMHLMARLGLHDVAGVVRYALR 211 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 120/216 (55%), Gaps = 8/216 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLD------IDV 55 +VM+VDDH ++RRG+R LE P +V+EA DG A+DL N V Sbjct: 6 TAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHV 65 Query: 56 ILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEV 115 +L+DL M + G++ ++ ++++LT + V A + AGA GY+LKD++PE Sbjct: 66 VLMDLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEE 125 Query: 116 LLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 + A+RA KG V + L R + + + LT RE D+L + QGLSN++IA Sbjct: 126 VATAVRAAVKGEVHLDAAVARLLARR--MASPQVGVTSLTARERDILVLVGQGLSNREIA 183 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L ISE+T + H+ N+L KL + SR A +L +++ Sbjct: 184 DRLVISERTARTHVSNVLSKLQLSSRTQAALLAIRE 219 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 9/217 (4%) Query: 1 MPEATPFQV--MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILL 58 M + P+ V +IVDD PL+R G+ +L P VVA+AGDG + L +R DV+L+ Sbjct: 1 MTASEPWTVGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLM 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M M GL LR ++I+LT DA V + AGA G+LLKD+ P+ ++ Sbjct: 61 DIRMPVMDGLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVT 120 Query: 119 AIRAGAKGSKVFSERVNQYLRER-------EMFGAEEDPFSVLTERELDVLHELAQGLSN 171 A+R A+G V S V + L R D ++L RE +V L QG SN Sbjct: 121 AVRQVARGYPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSN 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +I +VL++S TVK H+ +L KL + +RV +L Sbjct: 181 AEIGAVLHLSVPTVKTHVSGILTKLGLNNRVQIALLV 217 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 92/204 (45%), Positives = 130/204 (63%), Gaps = 1/204 (0%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+++DDH L R+GV QL++++P VV EA G +DLA RL DV+L+DLNM M+G+ Sbjct: 7 VLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMPDMNGI 66 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 +TL +R+ GV A+ ++LTVSD DV A + AGA GYLLKD +PE L ++ +G+ Sbjct: 67 ETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKALQGTA 126 Query: 129 VFSERVNQYLREREMFGAE-EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 V SE V L G S L+ RE +VL L +G+ NK+IA L+IS TVKV Sbjct: 127 VLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDISVGTVKV 186 Query: 188 HIRNLLRKLNVRSRVAATILFLQQ 211 H+++LL KL++ SRV A + +Q Sbjct: 187 HVKHLLHKLDLHSRVEAVVWHHEQ 210 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 10/220 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E P +++V+DH LMR G++ L+ EV+ EA +G AIDLA +L +++L+D+ Sbjct: 1 MSEQ-PIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDI 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + + G+ ++ +++ L+ + V ++ AGADGY LK D + LL I Sbjct: 60 ELPILDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFG---------AEEDPFSVLTERELDVLHELAQGLSN 171 R G ++ L + P +VL++RE +VL +++G SN Sbjct: 120 RLIQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSN 179 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ++IA+ L +S T+K ++R +L KL+V RV A +++ Sbjct: 180 QEIANQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVRE 219 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 101/208 (48%), Positives = 141/208 (67%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +VMI+DDHPLMR+G+ QLL LD E+V EA G ++ AN+ +D+ILLD NM+ Sbjct: 2 SNAIRVMIIDDHPLMRKGIAQLLSLDSKFEIVVEAKSGEEGLEFANQYQLDLILLDFNMQ 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+SGL+TL LR G +IIILTVSD DV A+I+ GA+GY LKDSD +LL I Sbjct: 62 GISGLETLKRLRSQGHLTKIIILTVSDNKQDVIAMINHGANGYFLKDSDASLLLSNINKV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G V S+ + +YL + + + + LT+RE +L E+A+G SNK+I+ L+ISE Sbjct: 122 LAGELVLSDDLIKYLNDLDEEDNIREKLNNLTKRERQILQEIAKGQSNKEISINLHISEG 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVKVH+++LL+KL +SRV A I++LQQ Sbjct: 182 TVKVHVKSLLKKLQAKSRVEAAIVYLQQ 209 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 118/204 (57%), Gaps = 3/204 (1%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+IVDD+P + G++ +LEL+ EVV+ + AI+ + DV+L+D+ M M G Sbjct: 5 KVLIVDDNPAVLDGLKIILELE-NFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMPVMDG 63 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ ++ ++IILT + + GADGY+LK SD + ++ +I + G Sbjct: 64 IEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSVLDGK 123 Query: 128 KVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V + + Y+ + +++ + LTEREL++ ++QG SNK+IA +L ISE TV Sbjct: 124 VVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFISEGTV 183 Query: 186 KVHIRNLLRKLNVRSRVAATILFL 209 + +I ++L+KLN+++R + +L Sbjct: 184 RNYITSILQKLNLKNRTQIAVYYL 207 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 7/208 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P ++M+ DDH ++R G+ L+L+P E+VAEA G AI DV LLD + Sbjct: 3 QRPIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLP 62 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M+G++ ALR TA+I+IL+ + DVF + AGA+ YLLK++ ++ AIR Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTV 122 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 GS F ++ L R LT RE VL E+ +G SNK+I L I+E Sbjct: 123 HAGSPYFPPEISAILAARMRR-------EELTPREKSVLFEIVKGSSNKEIGCCLEITES 175 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK+H+ +LL+KLN + R A + +Q+ Sbjct: 176 AVKIHVTHLLQKLNAKDRTHAATIAIQR 203 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 87/208 (41%), Positives = 126/208 (60%), Gaps = 5/208 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +V+++DDH L R G+++LL+ G + V GDG + IDLA L DVILLD+ M M+G Sbjct: 4 RVLLIDDHTLFREGLQELLKRH-GIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L+ L LR+ G+ I++LT S D+ + GA GYLLK+ +P L++A+ +G Sbjct: 63 LEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 128 KVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 V + + Q L + + E PF LT RE ++L LA+G SNK IA L IS+ Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TVK+H++ +LRKL V SRV A +L +QQ Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLAVQQ 210 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++++VDDH ++R G+ LL VVAEA D A+ + DV L+D+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G SG++ L +R + A++I+LT D DVF ++AGA GYLLK L A+ Sbjct: 61 RMPGASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R G + + + E S L+ RE++ L LA+G SN++I S L + Sbjct: 121 RKVHAGERCVPQSL-------ETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGV 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E+T K H++ +L KL R A ++ Sbjct: 174 TERTAKAHVQAILVKLEAADRAEAVDAAYKR 204 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 11/212 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++VDD ++R G++ +L LD ++ EA +G + + + D+IL+D+ M M+ Sbjct: 2 INVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ ++ ++IILT + V I GADGY+LKD+ ++++I+A G Sbjct: 62 GVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNG 121 Query: 127 SKVFSERVNQYL-----------REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 + V L + + ++ +LT+RE+DV +AQG SNK I Sbjct: 122 DILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDIC 181 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L ++E TVK ++ N+ KL + SR + Sbjct: 182 HTLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 12/211 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDDH +R +R +LE VV A DGA A++L L+ D++L+DL M M Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ +I++L+ + ++ +GADGYLLK + L E IR +G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV------------LTERELDVLHELAQGLSNKQI 174 + ++ + + + + +ED LT+RE ++L LAQG+ K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAAT 205 AS L +S+ TV+ + L KL VR+R A Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAV 593 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 104/218 (47%), Gaps = 13/218 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V +VDD L+R G R +L+ V EA DG A++ A +DVIL+D+ M M Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ + +II+LT D+ + V ++ GA G+LLKD+ PE L+ A+R + Sbjct: 62 GLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQ 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPF-------------SVLTERELDVLHELAQGLSNKQ 173 S V S L + A + LT RE ++L +A G SN + Sbjct: 122 SAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTE 181 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IA L IS TVK H+ +L K R RV A + + Sbjct: 182 IAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSR 219 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 8/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T ++++VDDH ++R G+ LL G +V+ +AGDGA+AIDL L DV++ DL Sbjct: 1 MSAMT-IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDL 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G + + +R + A++I+LT D +VF + AGA YLLKD +P L++ + Sbjct: 60 RMVPMDGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTV 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G K + L E A LT R+L+VL LA+G SN +IA+ L I Sbjct: 120 HAVYAGRKAIDPSIAAKLAEHVASDA-------LTARQLEVLRSLAEGRSNIEIANTLYI 172 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 SE TVK HI+ +L+KL R R A + +++ Sbjct: 173 SEGTVKAHIKAILQKLGARDRTQAVTIGIKR 203 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDHP++R +R LLE +VV A DG AI+L +L ++L+D++M + Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIVD 417 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ +I+ILT + + + +G DGYLLK P L E IR +G Sbjct: 418 GISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRG 477 Query: 127 SKVFSERVNQYL-REREMFGAEEDPFSV-------LTERELDVLHELAQGLSNKQIASVL 178 + + ++ L + E + +DP S+ LT REL++L +++GL K IAS Sbjct: 478 GTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNF 537 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAA 204 +S+ TV+ + + KL VR+R A Sbjct: 538 YLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 8/215 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +V++ DD L+R G+R +++ PG VV EA G A+ +A DV+L+D+ M Sbjct: 11 TEPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMP 70 Query: 64 GMSGLDTLNALRRDGV--TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 G+ GL + D +++ILT + VF + +GA G+L K + P+ L++AIR Sbjct: 71 GLDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIR 130 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIA 175 A+G + S + L R + + +P + LT+RE ++ +A G+SN IA Sbjct: 131 TVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIA 190 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L +S TVK H+ + + KL R R +L Q Sbjct: 191 RQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 5/212 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +V++ DDHP++R G+R LLE +P VV EAG A++LA L DV +LD++M Sbjct: 2 TTNKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G +GL+ L + G+ + +ILTV + ++ AG GY+ K S L+EAIR Sbjct: 62 PG-NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRL 120 Query: 123 GAKGSKVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A+G + + L + G +DP +L+ERE +VL A G + ++IA L Sbjct: 121 VARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +S +TV+ + +++KL R L+ Sbjct: 181 FLSPKTVETYRHRVMQKLGFSRRSELVRFALR 212 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 120/205 (58%), Gaps = 4/205 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLD-IDVILLDLNMKGMSG 67 +++VDDH ++R+G++ LL + V+A+ +G ++ + D+I++DL M ++G Sbjct: 6 IILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPELNG 65 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 ++ ++ ++++L+ V ++DAGADGY +KDS+P+ L+ I+ A G Sbjct: 66 IEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAAGE 125 Query: 128 KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 ++F V + + +P L++REL+VL +++GL+NK+IA L +SE+TVK Sbjct: 126 QIFHPDVMKVRKSGMNLAHLRNP---LSKRELEVLKAMSEGLTNKEIAEKLFVSEKTVKT 182 Query: 188 HIRNLLRKLNVRSRVAATILFLQQR 212 H+ ++ KL V R A++ ++ + Sbjct: 183 HVSHIFAKLEVGDRTQASMYGVKYK 207 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 23/227 (10%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R G+ +L+ +P VA+AGDG A+ L +R D DV+L+D+ M M Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 67 GLDTLNALRRDG-----VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 GL + R +++LT D + V + + AGA G+LLKD+DP++L+ A+R Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 122 AGAKGSKVFSERVNQYLRER------------------EMFGAEEDPFSVLTERELDVLH 163 A +G + + L ER G + L+ERE DVL Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 164 ELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +A+GLSN+ +A+ L +SE TVK H+ ++L KL + SRV A ++ + Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYE 237 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 114/206 (55%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDH L+R G+R++LE G VV EA G A+ + D++L+D++M G+ Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ + R ++I+L+V + ++ GA GYL KDSDP+ + AIR A G Sbjct: 62 GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 K S + Q + + ++ +PF L+EREL++ L +G IA LNIS +TV Sbjct: 122 QKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTVN 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 H + KLNV + V T L L+ + Sbjct: 182 THRYRMFEKLNVSTDVELTHLALRHK 207 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 106/206 (51%), Gaps = 1/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R G+R +LE EVV EA G L L VILLDL+M G + Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGRN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ + LR D +I++LT+ V AGA GYL K+S L+EA+R A G Sbjct: 62 GLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S + + L + + P L++REL+V + G S QIA+ L +S +TV Sbjct: 122 GTYVSPAMAEKLA-LGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 + L+ KL +RS A ++ R Sbjct: 181 TYKMRLMEKLQLRSDAALVRYAIEAR 206 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A+P +V ++DDH L R+GV Q++E DP VV EA G+ + LA L DV+L+DLNMK Sbjct: 21 ASPTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMK 80 Query: 64 GMSGLDTLNALR-RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G++G++TL + + A+ ++LTVSDA D+ + AGADGYLLKD +PE L +++ Sbjct: 81 GLNGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKK 140 Query: 123 GAKGSKVFSERVNQYLRER--EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G V + + + L++ E + D LT+RE ++L LA GL+NK IA L I Sbjct: 141 VISGMTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGI 200 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S+ TVKVHI++LL KL + SR+ A + +++ Sbjct: 201 SDTTVKVHIKHLLSKLKLTSRLEAAVWAHRKK 232 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 1/205 (0%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++VDDH ++R G+R LLE P VV EA D +AI A L D+ILLDL++ SGL Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + +LR A+I++LT+ D V + AGA GY+LK + L+ AIRA +G Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 129 VFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 + + L E + + +P+ L+ERE +VL +A+G + +IA LN+S +TV+ Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 188 HIRNLLRKLNVRSRVAATILFLQQR 212 + + KL +RSR A L Sbjct: 184 YRTRGMEKLGLRSRAALVQFALDHN 208 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 113/210 (53%), Gaps = 6/210 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R G+R +L+ PG VV A DG A++LA RL DV L+D+ M M Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 67 GLDTLNALRRDG--VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ AL G ++++T D V+A + AGA G+LLKD+ P++L +A+ A A Sbjct: 83 GIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAA 142 Query: 125 KGSKVFSERVNQYLREREMFGAEED----PFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + + V L P LT+RE VL +A G +N +IA+ L+I Sbjct: 143 CGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHI 202 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 S TVK HI +L+ KL R+RV + Q Sbjct: 203 SLSTVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 1/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++ I DDH L+R G+R++L EVV EA +GA A+++ DV+LLD+ M Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + V +I+IL++ + AGA+G++ K + E LL+AI +G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + +++ ER + E P L++RE V+ LAQG++N++IA VL IS +TV Sbjct: 122 QRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 H ++L+KL +R+ T +Q Sbjct: 182 DTHRSHVLKKLELRNNSDITRFAIQH 207 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 121/208 (58%), Gaps = 4/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 PF +++VDDH L+R GVR +LE VV EA +GA A+ L + D++L+D+ + GM Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L R + ++IIL++ D + V + I +GA ++LK + LL+A+R A+ Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G S +V+ L +R G + P L+ REL VL +A+G ++K IA +L++ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFL 209 QTV+ + + +++KL V + T L L Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLAL 209 >UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEH8_9CLOT Length = 206 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 117/204 (57%), Gaps = 2/204 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD P++ +G+R +LE + A +G A++L DV+LLD+ M + Sbjct: 3 IRVILADDDPIICQGLRMILETQQDIALCGVAENGVQAVELCRTQRPDVVLLDIRMPLLD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + A ++LT D + + + G GY+LK+S + +L A+RA A+G Sbjct: 63 GIEAAAQIMQMEAGAP-LLLTTFDEAEFILRALKTGVRGYILKNSPAQRILTAVRAVAEG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 VF + + +Y+R+R +F + FS+LT RE++V+ +A+GLSNK+IA L +S TV+ Sbjct: 122 GTVFQQDILEYIRDRTVF-PDHTIFSLLTPREMEVVALIAEGLSNKEIAERLFLSNGTVR 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQ 210 HI +L K + R + FL+ Sbjct: 181 NHISVILEKTGLEHRTQIAVHFLK 204 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD L+R G+R L++ VV EA DG A+ LA DV+L+DL M M Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 67 GLDTLNALRRDGV--TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G++T A+R D + +++LT D +DV + AGA GYLLKD + L AIR Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 125 KGSKVFSERVNQYLRER----EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + +V + + R +E+ + LT RELD+L + +GLSN++I L + Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 S +T + ++ LL KL VR R +L + Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVLAHK 211 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 70/227 (30%), Positives = 119/227 (52%), Gaps = 17/227 (7%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + +V++VDD ++R+G+ ++++ EV EA +G A+ + + DV+L+D+ M Sbjct: 6 KKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 MSG+D + R + +++ILT D + I AGA GY+LKDSD + +L+ IR Sbjct: 66 PNMSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIRR 125 Query: 123 GAKGSKVF-----SERVNQYLREREMFGAEED------------PFSVLTERELDVLHEL 165 +G +F ++ + + L+ ++ + F LT+RE DVL +L Sbjct: 126 AHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQL 185 Query: 166 AQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 + G N QIA L IS TVK HI +L+K+ V R A ++ + Sbjct: 186 SYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYK 232 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 11/215 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 + ++VDD L+R G+R LL+ P EVV EA DG +A+ L RL DV+L+D+ M + Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L ++ILT V+ + AGA GYL+KD +P +L+A+R A+G Sbjct: 62 GIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDP-----------FSVLTERELDVLHELAQGLSNKQIA 175 + + V + +R D + LT RE DVL + GLSN +IA Sbjct: 122 EPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIA 181 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 LN+ TVK HI LL KL +R+RV A IL + Sbjct: 182 RDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHR 216 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 2/212 (0%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 A +V++VDD L+R G+R++L + G +V E DG+ DV+++DL Sbjct: 9 TAAPAIRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLR 68 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M+ + G+ + L +++LT D + + AGA G++LKDS E L+ A+R Sbjct: 69 MRNVDGITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVR 128 Query: 122 AGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A + V + R + LTERE DVL +A+G +N +IA+ L Sbjct: 129 AVVRDGAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLG 188 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ISE TVK HI ++ KL++R R AA + Sbjct: 189 ISEVTVKSHINHIFTKLDLRDRAAAIVYAFDH 220 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 86/244 (35%), Positives = 119/244 (48%), Gaps = 40/244 (16%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R G+ +L PG EVV EA DG A+ +A + DV+L+D+ M M Sbjct: 2 VKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDMD 61 Query: 67 GLDTLNALRRDGVT--AQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ A+ G +I+ILT D V+ + AGADG++LKD+ PE LL A++A A Sbjct: 62 GIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAVA 121 Query: 125 KGSKVFSERVNQYL--------------------------------------REREMFGA 146 G +FS V + L R A Sbjct: 122 DGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSSA 181 Query: 147 EEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 E + LT RE DVL +A GLSN +IA L +SE TVK H+ + KLN+ SR A + Sbjct: 182 ERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAVV 241 Query: 207 LFLQ 210 L + Sbjct: 242 LAYE 245 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 1/207 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+IVDDH L+R G++ LL + EVV EA G A+ L L DV++LD + + Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ L+ + +++LT S V + AGA GY++KD L +IRA A+ Sbjct: 62 DGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVAR 121 Query: 126 GSKVFSERVNQYLREREMFG-AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G +V YL ++ A+++ L ++L ++ +AQG +N++IA + +SE+T Sbjct: 122 GEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKT 181 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 VK ++ +R++ V++RV A ++ + Sbjct: 182 VKGYLAEAMRRMGVKNRVEAAMVASKN 208 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH ++R G+R+++E +V+ EA +G AIDL DV ++D++M G+ Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ ++ L + ++ILT+ + V I+AGA GY+ K S PE L+ AIR G Sbjct: 62 GLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSG 121 Query: 127 SKVFSERVNQYLRER-EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 S+ +E + L R + L++REL VL LA G +N++IA +IS +TV Sbjct: 122 SRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 + LL+KLN+R+ + +Q Sbjct: 182 DTYRARLLKKLNLRNNADISRFAIQNN 208 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 106/208 (50%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++ IVDDH ++R G++ L E+V EA G A+ + + DV+LLD+ ++ Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ G DT + ++++L+ +V A AGA Y+LK+ +++AI+A Sbjct: 61 GIHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 +G + + + S L++RE ++LH + +G +NK+I L +SE+ Sbjct: 121 MQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEK 180 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H+ +L KL V +R A ++ Sbjct: 181 TVRNHVSRILDKLGVSNRSQAAAFMARR 208 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 2/211 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++V+I DDHP+ R +R LL+ DP EV+ EA +G A L ++ D++L+D+NM Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 SGL+ +++ +++IL+VSD +D+ I GA GYLLK+ +P+ + + A Sbjct: 61 KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHAL 120 Query: 124 AKGSKVFSERVNQYL--REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + L R R+ +E +VLT RE +++ + G +N++I+ L I+ Sbjct: 121 LGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIA 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 E TVK H++N+L KL + +RV ++ Sbjct: 181 ENTVKNHLKNILEKLQLANRVQLAAYAVRHH 211 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 115/212 (54%), Gaps = 5/212 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++M+VDDHP+ R G++ +L + V+AEA DG SAI++A + D+I++D++M G+ Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++R +I++LT+ + + +DAGA GY+LK + L+ A++ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 126 GSKVFSERVNQYL-----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + L +++ + + L++RE +VL +A G + K+I++ L I Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S +TV + + ++ K+ + + A L+ Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRYALKHN 213 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 112/206 (54%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH L+R G+R+LLE +VVA+A G A+ DV+LLD+ M G+ Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGID 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G + L++ ++I +T + ++ GA GYL K+S E + AIR AKG Sbjct: 68 GWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKG 127 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 K S + Q + + +++ PF +L+ERE+ V+ + G++ + IA L +S +T+ Sbjct: 128 EKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTIN 187 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 + + KL +++ V T L ++ R Sbjct: 188 GYRYRMFEKLGIKNDVELTYLAMKHR 213 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 122/214 (57%), Gaps = 7/214 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP ++++VDDH LMRRG++ L L+P EV+ EA DG AI+L +L D+IL+D+++ Sbjct: 8 TPIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPL 67 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G+ ++RD +I+ L+ D + V ++ +GADGY LK+ + E LL IR + Sbjct: 68 LDGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLIS 127 Query: 125 KGSKVFSERVNQYLREREMFGA-------EEDPFSVLTERELDVLHELAQGLSNKQIASV 177 G R+ + G+ +VL+ERE +L +A+G SNK+IA Sbjct: 128 HGGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQ 187 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L +S T+K ++R LL KL+V RV A +++ Sbjct: 188 LFLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVRE 221 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 59/218 (27%), Positives = 118/218 (54%), Gaps = 9/218 (4%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +++VDDH ++R G++ L+ +V EA +G I+ +L DV+++D+ M Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 MSG++ + + + ++++IL++ D + + ++AGA GYLLKD D + ++AI A Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE---------DPFSVLTERELDVLHELAQGLSNKQI 174 G K F+ ++ L + ++ + LT+RE +L + G +N++I Sbjct: 121 YNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREI 180 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 A L IS +T++ H N+++KL V++ V + + ++ Sbjct: 181 ADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEK 218 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 3/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V +VDDH L+R GVR LLE DPG VV EA DG A+ + DV+L+DL+M M Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ A+ ++++LT V ++ AGA GY+LKD++P LL A+ A A+G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 RV L + D L+ RE VL +AQGL+NKQ+A L I+E+TVK Sbjct: 122 EVPIDPRVAGALLPSAGGPSVAD---RLSPRETQVLRLVAQGLANKQVARALGITERTVK 178 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ + R++ V R +A + Sbjct: 179 AHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++ DDH ++R G++ LL +P EV+ EA DG AID + L D++LLDL M + Sbjct: 4 KLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKL 63 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D + L + +I++LT+ D + A++ GA GY+LK + LL AIR A+ Sbjct: 64 NGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVAR 123 Query: 126 GSKVFSERVN-----QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + ++L E L+EREL+VL LA G +N+ IA +L++ Sbjct: 124 GEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHV 183 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 S +TV+ + ++ KL + R ++ Sbjct: 184 SVKTVETYKARVMEKLEMHKRAELVRYAMEN 214 >UniRef50_A5WD77 Two component transcriptional regulator, LuxR family n=3 Tax=Moraxellaceae RepID=A5WD77_PSYWF Length = 219 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 126/210 (60%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 +P ++++VDDHP++RRG+ LL L+P +VVA+ G A+ + +D+++LD N Sbjct: 7 TATSPAKILLVDDHPMLRRGMADLLSLEPDFQVVADVSSGEEALSYLAQNQVDLVILDQN 66 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G+SGLDT +R G A++++ TVSD+ D+ + G +GYLLKD PE + IR Sbjct: 67 MPGLSGLDTAEQIREQGHQAKVLMFTVSDSGDDIHNALKLGVNGYLLKDMQPEQVALDIR 126 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +G V S R+ L + +D S LT REL V+ +A+G SNK I + L IS Sbjct: 127 KALRGELVVSSRLAAVLAQALRTPNLDDIVSNLTSRELQVVKMIAKGHSNKMIGNELGIS 186 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVKVH++++L K N+R+RV + + Sbjct: 187 ESTVKVHVKHILNKTNLRTRVDVAVWAVNN 216 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 1/207 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+IVDDH LMR G+R +L EVV EA DG+ I +A ++ DV+LLD++M Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 MSGL+ L L + ++I+LT+ + + V GA GY+LK + +VL +A+RA Sbjct: 61 EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAV 120 Query: 124 AKGSKVFSERVN-QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + + E +D L+++E VL +A G +N++IA L IS Sbjct: 121 YSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFL 209 +TV+ + ++ KLN + R L Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFAL 207 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH + G+R+LL G E+ A DGA A+ A RL DV L+D+ M ++ Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + ++++L++ + + + AGA GY+LK+ + L AI+ A G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 127 SKVFSERVNQYLRE---REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + L R E+ L+ERELDVL L +G + KQIA L+IS+ Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV H R++L KL S T +++ Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIRE 210 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 6/208 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +V++ DDHPL R+G++ LE + +V EA DG A L L DV LLD+ M Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G+ ++ + + I+LT D+ V A + AGA G++LK + L++AI+ Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A GS V + GA+E+ L+ RE +VL A+GLS+K++A+ L ISE+ Sbjct: 121 ATGSLFLDSEVASVV------GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISER 174 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ H+ ++ KL ++ A +L L+ Sbjct: 175 TVQTHLASVYDKLGAHNKTEAMLLALKH 202 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 3/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V++VDD L+R G+R +LE +VV EA DG+ + L DV+++D+ M + Sbjct: 28 PVSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRV 87 Query: 66 SGLDTLNALRRD-GVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 GL + + D +I++LT + V+ + +GA+G+LLK + P +++A+R Sbjct: 88 DGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIV 147 Query: 125 KGSKVFSERVNQYLRERE--MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + +Y+ + E +VLT+RE DVL +++GLSN +IA+ L + Sbjct: 148 SSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGA 207 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 QTVK H+ ++L KL R R A I+ + Sbjct: 208 QTVKSHVSSVLAKLGARDRTQAVIIAYE 235 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 115/212 (54%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V+I DDH ++R G++Q+L EVVA+A + A AI LA +DV++LD+ Sbjct: 1 MSFTSTIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++ SG++ N ++++ +++L++ + + AGA GYL K S + L+ AI Sbjct: 61 SLPDRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R AKG K S V L ++ G E+ L+ RE L +A GLS +IA L++ Sbjct: 121 RTVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSL 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S +TV ++ LL KLN+R T ++ Sbjct: 181 SVKTVSMYRARLLEKLNLRHNAELTHYAIKNN 212 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 14/225 (6%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI--DVILLDLN 61 T V+IVDD LMR+G+R+LLE++ G +VV +A DG A++ + D DV L+D Sbjct: 1 MTTVSVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDAR 60 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M G+ + +R + ++LT D VF + AGA GYLLKD PE L+ AIR Sbjct: 61 MPRMDGVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIR 120 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFS------------VLTERELDVLHELAQGL 169 A+G V + L G P + L+ERE +V + G Sbjct: 121 RVARGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTGA 180 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +N+++A L I+E T K H+ ++LRKL +R R + ++RG Sbjct: 181 TNREVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRERRGG 225 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 8/208 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + ++++VDDH +MR G+ +P EVVA+ +GA AI+ DV++LDL M Sbjct: 7 SDKIRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMH 66 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GMSG+D + ALR + ++++ + A +V+ + AGA G+++K+ E LLEAIR Sbjct: 67 GMSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKV 126 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G + + + ER M + L+ RELDVL +A+G SNK+IA+ L++ E Sbjct: 127 HAGEQYVPPEIAMRMGERLM--------AQLSPRELDVLKLVAKGRSNKEIAAELHVVEG 178 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 T K+H+ N+L KL V R A ++ +++ Sbjct: 179 TAKIHVANILTKLGVSDRTQAIVVAVRR 206 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 15/226 (6%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +V++VDDHPL R+GVR L + +++ E + L + + DV+L DLN+ Sbjct: 3 ATVKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPN 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M GL+ +RR +++L+V ++ F + AGA Y K+ P+ L +R A Sbjct: 63 MDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVA 122 Query: 125 KGSKVF------SERVNQYLREREMF---------GAEEDPFSVLTERELDVLHELAQGL 169 +G V RV + + + FS L++RE++VL +A G Sbjct: 123 RGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGA 182 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +NK IA L IS QTVK HI ++LRKL++ R A + L++ + Sbjct: 183 TNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIE 228 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 14/225 (6%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 ++++ DDHP+ R G+ +LL L+ EVVA+A DG +D+ + + D++LLDL Sbjct: 18 SSKPKIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLK 77 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G+ GL TL L+ ++I+LT SD ++ + G G +LK + E+L+++IR Sbjct: 78 MPGLDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIR 137 Query: 122 AGAKGSKVFSERVNQYLRER--------------EMFGAEEDPFSVLTERELDVLHELAQ 167 G + + + E S L++RE +++ +AQ Sbjct: 138 KVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQ 197 Query: 168 GLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 G NK++A + ISEQTVK H+ N+ KL V R+ + + Sbjct: 198 GFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNN 242 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 5/210 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Q+++VDD L+R G+ LLEL+ EV A +G AI A L ++IL+D+ M ++ Sbjct: 3 IQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ QII+LT D + + AGA GYL+KD P+ L +AI+ G Sbjct: 63 GVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAG 122 Query: 127 SKVFSERVNQYLR-----EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + V L +R + + LT REL+VL LA+G +NK+IA N+S Sbjct: 123 VFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLS 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVK H+ N+L +L +R R A + ++ Sbjct: 183 EGTVKNHVSNILMRLGLRDRTQAAVYAVEH 212 >UniRef50_B2JVP2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVP2_BURP8 Length = 215 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V+++DDH L R+GV QL++++P EV EA G I++A RL DV+L+DLNM M Sbjct: 3 PHTVLLIDDHALFRKGVAQLIQMNPSFEVTGEATSGQDGIEMAVRLKPDVVLIDLNMPRM 62 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++TL +R+ GV A+ I+LTVSD DV A + AGA GYLLKD DPE L +++ K Sbjct: 63 NGIETLEGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQKALK 122 Query: 126 GSKVFSERVNQYLREREMFGAE-EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G+ V SE V L G + LT REL+V L GL NK IA L+IS T Sbjct: 123 GTAVLSESVTGSLVHALSGGQRIPAAQNDLTARELEVFDYLVAGLCNKAIARKLDISVGT 182 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 VKVH++++LRKL++ SR+ A + Q+ G++ Sbjct: 183 VKVHVKHVLRKLDLHSRLEAVLW-QQEHGSR 212 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 5/205 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD L+ + ++ LL + +V+A A +GA AI + DV+L+D+ M M Sbjct: 1 MKILIVDDDQLVCQSLQVLLSREQDMDVMATANNGAEAITCCRDILPDVVLMDIQMPVMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++++ +I++LT ++ I AGA+GYL+K ++ + + +R G Sbjct: 61 GIQATREIKKEWPQIRIMMLTTFQDEQNIRLAISAGAEGYLIKSTEVSSMAQQLRVLFSG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + V V + L + + G F LT RE D++ + QGLSN++IA L ISE TV+ Sbjct: 121 TSVLDADVLKRLMQPQRKG-----FEELTPRERDIVELVVQGLSNREIAEQLYISEGTVR 175 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 + +L KL VR R I + ++ Sbjct: 176 NTLSIILEKLQVRDRTQLAIYYWRR 200 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 112/212 (52%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 + E + ++ IVDDH ++R G+RQ L VV EA +G AIDL +IDV+++DL Sbjct: 25 LKEGSMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDL 84 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G SGLD L LR I+IL+ LI GA GYL K+ +P+ ++EAI Sbjct: 85 SMPGQSGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAI 144 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R A G + + V L ++ + P L+ERE V +LA+G + IA L++ Sbjct: 145 RTIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSL 204 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S +TV + L+ K+ + S T L+ + Sbjct: 205 SVKTVSTYRTRLMEKMGLSSNSDLTYYALKNK 236 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 108/206 (52%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R G+RQ L ++VAEA +G +A++L DV+LLD+ + ++ Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDLN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L ++R ++I ++ ++AGA GYL KDS P +L A+ G Sbjct: 62 GLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 ++ S + + L M + P L+ RE+ VL L++G+ +I ++S +T+ Sbjct: 122 ARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTIS 181 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 + +L KL++ S T LQ + Sbjct: 182 TYRARILEKLDLASNAEITRYVLQHK 207 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 + ++VDDH L+R G+ +++ + + + G ++ + DVILLD+NM G Sbjct: 4 NKIRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPG 63 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 +G++TL L+ ++++LTV + + ID GAD Y+LK+S ++ AIR Sbjct: 64 KNGIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVY 123 Query: 125 KGSKVFSERVNQYL-----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G K + + + + + E + +LT REL++L+E+++GL NK+IA L Sbjct: 124 LGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLF 183 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +SE+TVK +I ++ +K+ V RV ATI ++ Sbjct: 184 LSEKTVKNYITSIFKKIEVEDRVQATIYAIRNN 216 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VM+VDDH ++R G+R LLE P VVAEA +G A +LA L V+L+D+ M G++ Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D L +++IL++ V AGA GYLLKD L++A+R A G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 127 SKVFSERVNQYLREREMFGAEED---PFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + + E P LT RE +VL +A+G + K A LNI+ + Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV H + +++KL +RS T +++ Sbjct: 182 TVDTHRQQIMKKLKMRSVAELTKYAIRE 209 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V IVDDHP+++ G++ L +V DG+ A++ A L DVIL+D++M M Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D + +++IL++ V + I AGA GYLLKD+ E + AI+A A Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G FS + + L + + E LT RE VL LA+G ++K+IA +LNIS +TV Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNES---EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 + H RN+ KL + S ++ Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKH 210 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 5/205 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++IVDD PL+ + +R LL + EV A A DGA+AI + D++L+D+ M GM Sbjct: 1 MNILIVDDDPLVCQSLRLLLSREADMEVTATANDGAAAIQCCEEVLPDIVLMDIRMPGMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ +++ QI++LT + + AGA+GY+LK + + + +RA A G Sbjct: 61 GIQAARQIKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRALASG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S V V + L E++ S LT RE D+L +A G SN++IA L ISE TV+ Sbjct: 121 SSVVDANVLKTLML-----PEKENRSDLTPRENDILELVALGCSNREIAEQLFISEGTVR 175 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 + +L KL +R R I + +Q Sbjct: 176 NTLSIILDKLELRDRTQLAIYYWRQ 200 >UniRef50_Q0HL36 Two component transcriptional regulator, LuxR family n=11 Tax=Gammaproteobacteria RepID=Q0HL36_SHESM Length = 225 Score = 248 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 112/209 (53%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P A +V +V+D L+R+G+ L+ + EV +A +G A+ +DV+L D+ Sbjct: 13 PTARTIRVGLVEDQQLVRQGIASLIAISQHIEVSWQAENGQEALKRLQTDAVDVLLSDIR 72 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + GL L LR + +I+LT D S + AGA+G+LLKD + LLEAI Sbjct: 73 MPVLDGLSLLKQLRAAQNSIPVIMLTTFDDSELFLNSLQAGANGFLLKDVSLDKLLEAIE 132 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G + V + +++ +L+ERE ++L +A G SNK+IA+ + ++ Sbjct: 133 IVAQGGHLIEPSVLEQMQQSSATAQSGPTHYLLSEREREILGFMAGGFSNKEIANAVFLA 192 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK H+ +L KL+ R R A + LQ Sbjct: 193 EGTVKNHVSTILAKLDCRDRTQAVLKGLQ 221 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 3/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH +MR+G++ +L L+ EVVAEA +G AI A+ L DV+++DL M M+ Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + + ++L++ + V AGA GYLLKD E L+ AI A G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV---LTERELDVLHELAQGLSNKQIASVLNISEQ 183 ++ + GA+ + L++RE +VL +A G S K+IA +S + Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV V ++++KLN+ + T +++ Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVRE 220 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++V+D PL R G+ +L P E+VAEA DG +A+ LANR ++LLD+ + G+ Sbjct: 5 VRVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGLD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G TL L+++ ++++LT + + V A++ AGADGY LK P+ LL IR + G Sbjct: 65 GRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDP--FSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + F +V +R E P + LTERE +VL +A+G SN +I L+IS T Sbjct: 125 NGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGT 184 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQ 211 V+VH+ +LRKL R A +L L++ Sbjct: 185 VRVHVHAILRKLGATDRTQAAVLALEK 211 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 1/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH L+R G+ ++L G +VV +A G + LA L DV+L+D+ M G+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIG 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L R +++++TV + L+ AGA GY+ K + E +++AIR G Sbjct: 62 GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAG 121 Query: 127 SKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + S ++ Q L + + D PF L+ERE+ + +A + I+ L +S +TV Sbjct: 122 QRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 + + KL++ S V +L ++ Sbjct: 182 NTYRYRIFEKLSITSDVELALLAVRH 207 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 2/208 (0%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 T +++IV+D PLM+ G+ Q L P E++ +A DG + + A L D++++D+ + Sbjct: 36 TSMRILIVEDDPLMQLGLEQALSEHPNFEIIGQAEDGYTGVQQALELKPDLVVMDIGLPR 95 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G+ ++ +++LT ++V A + +GAD Y +K + E LL AI A Sbjct: 96 LDGIAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQ 155 Query: 125 KGSKVFSERVNQYLREREMFGAEED--PFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G+ ++ + + + E ++L+EREL+VL + +G SN +IA L +S Sbjct: 156 DGATYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLST 215 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 T+K H+R ++ KL V RV A ++ L+ Sbjct: 216 NTIKTHVRGIMNKLAVDDRVQAAVVALR 243 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +V++VDDH ++R+G+R LLE ++V E+ G AI AN+L DV+L+DL++ G+ Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNGL 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G +R+ +I+ILT+ D V I GA GY+LK+S E+L +AI + Sbjct: 62 DGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVYR 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + V+Q + + + SVLT RE +++ + G SNK++A L IS +TV Sbjct: 122 GKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 + H N+++KL + S+ ++ R Sbjct: 182 ENHKTNIMQKLGLDSKHQLIQYAIKNR 208 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 3/205 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++VDDH LMR G+ L+ VV A DGA A++ RL V+L+DL+M + Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + + + ++++LT V +DAGA GY+LKD++P LL AIR+ A+G Sbjct: 62 GVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 RV + + + LTERE +VL + GL+NKQIA L I E TVK Sbjct: 122 HSPLDPRVARTVLHARRSPVRA---AELTEREQEVLALVGHGLANKQIARRLGIRESTVK 178 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H+ ++ +++ VR R +AT+ Sbjct: 179 AHLTSVFQRIGVRDRTSATLWARTH 203 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 116/209 (55%), Gaps = 6/209 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+I DD PL+ + +L +VVA A +G AI+ A + IDV +LD+ M + Sbjct: 9 PIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQMPYV 68 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D A+++ + +I++LT D+ V ++ G G+LLKD+ PE L++AI Sbjct: 69 NGIDAAQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAINRIYH 128 Query: 126 GSKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIASVLN 179 G+ V S V +Y+ + + P F LT REL+VL +AQ +N +IA+ L+ Sbjct: 129 GASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEIANYLH 188 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILF 208 I +TVK ++ L+ K+ VR RV + Sbjct: 189 IGSETVKTYVSRLISKIGVRDRVGLAVWA 217 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 3/212 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + P +V +VDDH ++RRGV LLE + EVV EAG A A+ L DV++LD+ Sbjct: 1 MADMDPVRVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G+ LR ++LT D +F I AGA GY+LK L+ AI Sbjct: 61 RLPDGDGVAVCRELRATT-DVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHAI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIASVL 178 R A G + + + R A +DP + LT +E +L + QG++N+QI + L Sbjct: 120 RTVAAGGSMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAEL 179 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 ++E+TVK ++ NLL KL + RV +L + Sbjct: 180 FLAEKTVKNYVSNLLAKLGMERRVQVAVLATK 211 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 3/207 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V+I DD L+R L+ P V+ A DG A+ +A R+ DV+L+D+ M + Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + +++ILT D V+A + AGA G+LLKD+ P LL AIR A G Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVL---TERELDVLHELAQGLSNKQIASVLNISEQ 183 + S V + L P L T RE +VL +A+GLSN +I L++S Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQ 210 T+K H+ LL KL R R I + Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYE 277 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 4/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD P +R +R LL+ VV A DG AIDL RL VIL+DL+M+ M Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHMD 442 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ +++I T + + GADG+LLK + L IR KG Sbjct: 443 GVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKG 502 Query: 127 SKVFSERVNQYLRERE----MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + + ++ + E+ + LT RE+++L +A+GL IAS L +S Sbjct: 503 GTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSN 562 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TV+ + KL VR++ A L+ Sbjct: 563 GTVRNYASTAYTKLGVRNKEEAVQKALE 590 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V +VDDH ++RRG+ LLE +P +V EA A+ DV +LD+ + + Sbjct: 3 ISVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L + ++LT +F I AGA G++LK L+ A+R G Sbjct: 63 GVELCRELLSTVPGLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGSG 122 Query: 127 SKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + + L R EE DP S L+E+E VL + +GL+N++IA+ L ++E+TV Sbjct: 123 GSLLDSKTTSALMNRIRREREESDPVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K ++ LL KL ++ R A +L + R Sbjct: 183 KNYVSRLLGKLGMQRRTQAAVLATELR 209 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 6/215 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V + DDHP++ G+R LL DP E+V EA G+ A+ + + D DV ++D+ Sbjct: 1 MTDR--IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDV 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G++GL+ + ++++LTV + ++ V L+ AGA GYLLK S E LL A+ Sbjct: 59 SMPGLNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAV 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIAS 176 RA A G V + + E L+ RE DVL +AQG SNK+IA Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ++S ++++ + KL +R+R Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAH 213 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 3/211 (1%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 A P +++IVDDH L R G++ +L G VV EA DG +AI L L DV+L+D+ + Sbjct: 2 TADPLRILIVDDHALAREGLKAVL-TSSGFSVVGEAADGPAAIALTEALCPDVVLMDVRL 60 Query: 63 KG-MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 KG M GL+ + G+ A++++LT+ D + V + AGA GY+LKD+ + L AI Sbjct: 61 KGDMDGLEATRRIAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIV 120 Query: 122 AGAKGSKVFS-ERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A+G + V+ +R E + S LT RE +++H +A+G++NK+I L I Sbjct: 121 RVAQGQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLGI 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 S TVK H+ L+ KL V R A +L + Sbjct: 181 SPATVKAHVERLIAKLGVTDRTQAAVLASRH 211 >UniRef50_C7MI23 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcineae RepID=C7MI23_BRAFD Length = 238 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 11/219 (5%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + P +V++ DDHP + G+ LL+ P VVA+AGDG +A+ A DV+L D+ M Sbjct: 22 SAPIRVLVADDHPAVLSGLVALLDSAPDLAVVAQAGDGETALAAAREHRPDVVLTDVRMP 81 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G +G++ ALR G A +++++ D V + AGADGYL+K DP+ +L A+R Sbjct: 82 GATGIEITPALRETG--AHVLVISGFDLDEYVLGALAAGADGYLVKTEDPQRILAAVRDV 139 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFS---------VLTERELDVLHELAQGLSNKQI 174 +G V S + + A P + T RE DVL +AQG +N+QI Sbjct: 140 HRGDAVLSAAATRAVVAELRGRASGHPAAGRSAVGPEPPFTRREEDVLALVAQGRTNQQI 199 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 A L + TVK H+ + L KL + SRV A + + Q RG Sbjct: 200 ARELFVEVTTVKSHLSHALVKLQLDSRVQAALWWQQHRG 238 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 121/216 (56%), Gaps = 4/216 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLAN--RLDIDVILL 58 M + +V+I DDH ++ G+ L+++ EV+ A +G A L +LD+D+ +L Sbjct: 1 MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D++M GL+T +R + +++ILT+ + S + +I AGA GY+LK+ L+ Sbjct: 61 DVDMPVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVN 120 Query: 119 AIRAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 AIR G + FS+ V L + +E A+ +P LT+RE +VL + +G++ K+I+ Sbjct: 121 AIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISK 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L I++ TV+ H RNL+ KL V++ + + + Sbjct: 181 QLFIADTTVETHRRNLIDKLEVKNSKELILYVAKNK 216 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 116/230 (50%), Gaps = 19/230 (8%) Query: 1 MPEATP-FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 M EA +V +VDDHP R G+R+++ DP VV EA G AI + + D++L+D Sbjct: 1 MSEANGHIRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMD 60 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 +NM GM GL+ L+ + +I+++TVSD + +F I GA GYL K+ P E Sbjct: 61 INMPGMGGLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREY 120 Query: 120 IRAGAKGSKVFSERVNQYLREREMFGAE------------------EDPFSVLTERELDV 161 +RA S+ + L + A + LT RE D+ Sbjct: 121 LRAVVDDEAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDI 180 Query: 162 LHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L + G SNK+IA +SE TVK H++N+L+KL++ +RV T +Q Sbjct: 181 LERVVTGESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQ 230 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 8/212 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++M VDDHPLM +G+ L++ P +V A+ D+ L+DL Sbjct: 5 MDPSAEIRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDL 64 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + +G+DT+ ++ ++ A+IIILT+ + ++ + +GA GY+LK+ PE LL+ I Sbjct: 65 RLPDGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVI 124 Query: 121 RAGAKGS-KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 R G K + L + LT RE +VL +++G SNK++ + L+ Sbjct: 125 RKVHSGEKKRLHPVIAATLADHFGE-------ENLTSRETEVLQLISEGNSNKEVGNRLS 177 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ISE+TVK H++N+L KL R A + +++ Sbjct: 178 ISEETVKGHVKNILGKLGANDRTQAVSIAVRR 209 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + T ++ +VDDH ++R G++ +L E+ E+GD A+D +L+ D+++ D++M Sbjct: 2 KPTNTKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISM 59 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G+SG+D + LR+ + IIL+ D V L++ G +GY+LKD LL AI A Sbjct: 60 PGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEA 119 Query: 123 GAKGSKVFSERVNQYLREREMFGAEE--------DPFSVLTERELDVLHELAQGLSNKQI 174 KG S + + + + FSVL++RE ++L +A+G SN+ I Sbjct: 120 VHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESI 179 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +L IS TVKVH N+++KLN+ + ++ Sbjct: 180 GKILGISPATVKVHRANIMKKLNLHKVADLVMYAIR 215 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 6/212 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V I DDH L R+G+ +LELD EVV A +G ID + DVIL+DL M M Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++ ++++L++ D + ++ GA+GYLLK++DP+ L+ AI Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 126 GSKVFSERVNQYLR------EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 F+ ++ + +R + + LT+RE +VL + + L+ ++A L Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 IS +TV+ H +NLL K ++ + L+ Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKN 213 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 10/213 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V++VDD P++R G+ +L+ V A DG A++ RL DV+L+D+ M Sbjct: 14 PISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRR 73 Query: 66 SGLDTLNALRRDGV----TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 GL L L R G+ +++++LT D + V + AGA G+LLK+S E L EA+R Sbjct: 74 DGLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVR 133 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEED------PFSVLTERELDVLHELAQGLSNKQIA 175 A A G S V + + E + G LTERE+DVL + GLSN +IA Sbjct: 134 AAAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIA 193 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 L +S TVK H+ +L K +SR A +L Sbjct: 194 GELVVSLHTVKTHVSRVLMKTGCQSRAQAAVLA 226 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 8/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +++IVDDH + R+G+ L +P E+VAEA +G A+++ D++L+D+ Sbjct: 1 MRSPTNTRILIVDDHFIARKGLIGSLSAEPDIEIVAEANNGFQAVEMFVLHRPDLVLMDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G+ +R D A+I +LTVSDA D+ IDAG GYL K + E LL AI Sbjct: 61 RLPLQDGVQAARTIRNDHPQARIAMLTVSDAEEDILGAIDAGVVGYLPKSVEREQLLTAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A+G + F+ + LR LT+RE +VL ++ +G SNK+I L I Sbjct: 121 HRLAEGGEYFAPEIEAKLRSTNRVS--------LTKRETEVLTQIVKGRSNKEIGYDLGI 172 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E TV++H+ +L +KL+V R A ++ +Q+ Sbjct: 173 AEPTVRLHLTHLFKKLHVMDRTQAAMVAVQR 203 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P ++++ DD L+R + L +P E+VAEA DG +A+ DV+LLD+ M Sbjct: 1 MNPIRLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMP 60 Query: 64 GMSGLDTLNALRRDGVT--AQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M GL+ L + ++I++T D VF ++ GA G+L KD+DPE +L A+R Sbjct: 61 IMGGLEVLRHI-ETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVR 119 Query: 122 AGAKGSKVFSERVNQYLRER------EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 A G + S V + + +R G LT RE ++L +A GLSN +IA Sbjct: 120 VVAAGESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIA 179 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L +S TV+ H+ + KL R R ++ + Sbjct: 180 ERLVVSPATVRTHVGRAMMKLRARDRAQLVVIAYR 214 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 12/220 (5%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E +++I DD PLM +R L+ PG V +G A++ ++ DV+L+D+ Sbjct: 1 MSEE--LRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDM 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G++ ++ +++ +T + + + AGA GYLLKD++P +L AI Sbjct: 59 QMPLMDGVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAI 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE----------EDPFSVLTERELDVLHELAQGLS 170 +A +G V S V L S LTEREL VL LA+G S Sbjct: 119 QAVHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQS 178 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 N +IA+ L +SE TVK ++ ++ KL VR RV I Q Sbjct: 179 NPEIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQ 218 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 14/215 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLD-----IDVILLDLN 61 +V++VDDHP++R G+R +L PG VVAEA +G +A+ ++L +D++L+DL Sbjct: 4 IRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLMDLQ 63 Query: 62 MK-GMSGLDTLNALRRD---GVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 M GM G+ ++ ++ILT D +D+ A ++AGA GY+LKD+ PE + Sbjct: 64 MGSGMDGVTATEKIKAGEGGNPPPPVLILTTYDTDADILAAVEAGASGYMLKDAPPEQIR 123 Query: 118 EAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 +A+ + A G + V L R +P L+ RE+ +L LA G+SN+ +A Sbjct: 124 QAVLSAAAGQTALAPEVAARLMGRIR-----NPSPALSGREVQLLELLATGMSNRAMAKQ 178 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L ISE TVK H+ ++ KL V +R AA + Q+R Sbjct: 179 LFISEATVKTHLVHIYSKLGVDNRTAAIAVATQRR 213 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 1/190 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VMIVDDH ++R G++ L+EL V+AEAG G A+++A DV+++D+ M GMS Sbjct: 2 VRVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGMS 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D A+ ++I+LT +++ I AGA GY+LK +D LLEAI A+ Sbjct: 62 GIDACRAIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAARN 121 Query: 127 SKVFSERVNQYLRERE-MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + V + +R A + L+E E +L +A+G NK+IA L ++E+TV Sbjct: 122 ESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKTV 181 Query: 186 KVHIRNLLRK 195 + ++ + K Sbjct: 182 RNYVSKIFSK 191 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 3/205 (1%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 MIVDDH L+R G++ LL+ V AEA G A+ L + ID++++D++M GM GL Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 + +R +I++L++ + ++ + GA GYL K S L +A++ ++G + Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 130 FSERVNQYLRE---REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S Q L + R A +DP SVLT RE +V EL G + +IA L++S +TV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H +++ KL+ R L L+ Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRN 205 >UniRef50_C4DCC2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCC2_9ACTO Length = 225 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 + +IVDD L+R G+ LL+ +P VVA+A DG SA+ A R +DV L+D+ M GM Sbjct: 2 IRTLIVDDDALVRLGLCDLLDDEPDITVVAQAADGKSAVAQAERHRVDVALMDVRMPGMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ LR AQ+I LT D V+ +I AGA G+LLKD+DP ++ AIR A G Sbjct: 62 GIAATARLRALPEPAQVIALTTFDLDEYVYDMIAAGAAGFLLKDTDPGEIIRAIRVVAAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIASVLNI 180 + + L ER A LT RE DVL LA G +N +IA+ L++ Sbjct: 122 DAMLHPAAARRLIERYHRAARPRATAVRHRVDRLTPRETDVLRHLALGATNAEIAASLSM 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILF 208 E TVK H+ +L L+V +RV A + Sbjct: 182 RESTVKAHVTRILATLDVTNRVQAALCA 209 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 111/212 (52%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V+I DDH ++R G++Q+L V+AEA + AI L ++ + DV+LLD+ Sbjct: 2 MSKKPKIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDI 61 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++ SG++ L ++R+ +++L++ + +GA GYL K S L+ AI Sbjct: 62 SLPDRSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAI 121 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 + A+G K + V + L + ++ P +L++RE +A GLS +A+ L++ Sbjct: 122 QTVARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSL 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S +TV ++ LL K+ ++ T + Sbjct: 182 SVKTVSMYRARLLEKMQLKHNAELTHYAFKHN 213 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 2/206 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++VDDH L R G+R LL+ G VV EA G + + + DV+ +D M GM+G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 +T ++I L++ + ++ AGA G+L+KDS + +L AI A G Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 128 KVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 F E V + L R E L+ RE+++L + +GLSN++IA L IS++TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 H N+L K ++ + + ++ Sbjct: 185 DKHRANILEKTGCKNTASLVVYAVRH 210 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 2/204 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDHP++RRG+R +LE + + +AEA A A+ + V+ +D+ + Sbjct: 54 IRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALPDGD 113 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + ++++LT++D V + AGA GY+LKD+DP+V+++A+R A G Sbjct: 114 GVEATRRILLSRPETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRTVAGG 173 Query: 127 SKVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 V RV + E PF LT RE D+L LA G +N +IA +SE+T Sbjct: 174 GLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGLSEKT 233 Query: 185 VKVHIRNLLRKLNVRSRVAATILF 208 V+ + + KL V RV A +L Sbjct: 234 VRNQLSAVFAKLGVTDRVQAALLA 257 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 115/206 (55%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DDHP++R G+R +LE V EA +G +A+ LA +++LD ++ ++ Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ +RR +++I T+ + S + + AGA GYLLK D L+ A+ A +G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 FS RV++ + + + G + LT RE +V+ +++G SNK+IA+ L +S +TV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVD 185 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 H +RKL +R+ V ++ + Sbjct: 186 SHRTTAMRKLGLRNAVDLVRYAIRNK 211 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 124/224 (55%), Gaps = 9/224 (4%) Query: 1 MPEATP---FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVIL 57 M ++T +++I DDH + R G+R+LLE +P +V+ EA DG A+ A RL DV+L Sbjct: 1 MDKSTATKTVRILIADDHTIFRDGLRRLLESEPEFDVIGEAADGGEAVQQARRLGPDVLL 60 Query: 58 LDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 LDL M + GLD L L D + +IIILT + + + + AGA G +LK+S ++LL Sbjct: 61 LDLAMPRVPGLDALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLL 120 Query: 118 EAIRAGAKGSKVFSER----VNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSN 171 + IR+ G + +YL+ + LT+RE+++L + G +N Sbjct: 121 KGIRSVMAGQYWVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTN 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 K+IA N+SE TVK H+ N+ K+ V SR+ + + QR A+ Sbjct: 181 KEIAKKFNLSEDTVKHHLTNIFDKVGVSSRLELALFAINQRLAE 224 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 1/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH + R GV L L+ EVV EAGDG A++ ++D DV L+D+ M M Sbjct: 5 IRVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMG 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ ++ + G+ +I LT + D+ L AG G++LK S + L+ AIR + G Sbjct: 65 GVELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSGG 124 Query: 127 SKVFSERVNQYLRE-REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 R L + E S L+EREL+VL+ LAQGL+ ++IA L++S++TV Sbjct: 125 DNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQ 210 K HI ++L KL V R A + Sbjct: 185 KNHISHILAKLKVSDRTQAVAWAWR 209 >UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Protease production enhancerprotein) n=83 Tax=Betaproteobacteria RepID=C4KQQ0_BURPS Length = 233 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 124/221 (56%), Gaps = 16/221 (7%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+++DDH L R GV+ LL+ P EVV EA DG + A + DVILLDLNM G+S Sbjct: 3 IRVLLIDDHTLFRSGVKLLLQRQPDFEVVDEASDGVEGVKRAKQHQPDVILLDLNMPGLS 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+TL L +D +A ++ILTVS+ + ++ + GA G+L+K+ D E L+ IR A G Sbjct: 63 GLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPF----------------SVLTERELDVLHELAQGLS 170 V +E + LT RE D++ LA+G S Sbjct: 123 EPVIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGAS 182 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 NK+IA +++E TVK+H++N+L+KLN+ SRV + +++ Sbjct: 183 NKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVYAVER 223 >UniRef50_C3PHX2 Two-component system response regulator n=3 Tax=Corynebacterium RepID=C3PHX2_CORA7 Length = 215 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 113/214 (52%), Gaps = 8/214 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++VDD +RRG+R +LE EVVAEA +G + L DV+L+D+ M M Sbjct: 2 ISVVLVDDEQALRRGIRFILEGAADIEVVAEASNGREGVARVLDLQPDVVLMDIRMPVMD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ LR +++LT D + + AGA G+LLK +PE L+ A+RA A G Sbjct: 62 GIEAAGKLRASAPDIPVVMLTAFDTDEFIVDALHAGAMGFLLKTIEPEGLVLAVRAAATG 121 Query: 127 SKVFSERVNQYLRE--------REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 ++ S + + L E E P L++RE +V +AQGL N++IA L Sbjct: 122 QQLLSPKALKNLLALKRPEPAPAEPEALEARPLEGLSQRENEVAQLVAQGLDNQEIAGQL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +S TVK HI+++L KL +RV I L+ R Sbjct: 182 YVSVTTVKTHIKHILDKLGGTNRVHIAIAVLEAR 215 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 110/213 (51%), Gaps = 9/213 (4%) Query: 1 MPEAT-PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 M E+ P V++VDDHPL+R G+ LL P ++ EA DG AI RL DV+L+D Sbjct: 1 MTESPAPIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMD 60 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 L M + G++ + +R A+II+LT + AGA YLLKD L++ Sbjct: 61 LQMPRLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDT 120 Query: 120 IRAGAKGSKV-FSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 IR A G + V + + L+ RE +VL +A GLSNK+I + Sbjct: 121 IRMVAGGRRAPIPPAVAASIAAHVVE-------DRLSPRETEVLRHVAGGLSNKRIGERM 173 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 ISEQTVK H+++L+ KL V R A L++ Sbjct: 174 QISEQTVKAHMKSLMDKLGVGDRTHAVTQALRR 206 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 108/206 (52%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH L+R G+ QL E PG EVV EA +G + +D++LLDL+M G + Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGEN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G + + +RR I+IL+ D V + AGA GY+ KD P+ LLEAI Sbjct: 63 GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 K S + + L + ++L+ RE ++ L +GLSN I+ L IS++TV Sbjct: 123 GKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVS 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 H NLL KL +++ V +Q + Sbjct: 183 AHKINLLNKLGLKNVVELVHYSIQHQ 208 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 3/205 (1%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GMS 66 +V+IVDDH L+R+G+R +L G EVV E G A+ A + DV+L+D++M G+ Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ T LR+ ++I+LT+ D V ++DAG G + K D ++ AI+ G G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S R Q + + L+ RE +VL LAQG +N+++A L+IS +TV+ Sbjct: 125 HPYLSRRWGQRANAETVSPSRTA--ERLSPRETEVLVLLAQGYTNREVADALHISVKTVE 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 H ++++R++ + SR A Q Sbjct: 183 THRQHIMRRIGLHSRAALVRYAYQN 207 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 110/197 (55%), Gaps = 4/197 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +++I DDH ++R ++ ++ EV+ +A DG A D++L+DL+M G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL T + ++I+LT+ D + + + AGA GY++K+S E+LL+AIR+ Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 126 GSKVFSERV---NQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + ++ + + + A E+ L++RE ++L +A G NK+IA L IS Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 183 QTVKVHIRNLLRKLNVR 199 +TV+VH ++++KL ++ Sbjct: 181 KTVEVHKSHIMKKLEMK 197 >UniRef50_B4D5C2 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C2_9BACT Length = 213 Score = 243 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 7/211 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +VM+VDDH + G+R L+ + V+AEA DG AI+ D+ L+DL Sbjct: 1 MKTSAKIRVMLVDDHFAILMGLRACLKPEGDIAVIAEAADGGEAIEQYRAHLPDITLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++ + G+ + + R+ A+II LT D+ + AGA Y++K+ + +L AI Sbjct: 61 SLPRLDGVAAIRTICREFPEARIIALTTRQGDDDIHQALSAGARSYVMKNMPRQEMLRAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA G + + V L + E LT REL+V+ LA+G SNK+I L I Sbjct: 121 RAVHDGQEYLPQEVQTALLQHEKRAP-------LTPRELEVIRLLARGCSNKEIGMALGI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +E T K+H+ +LL K+ V R A + L+ Sbjct: 174 AEITAKIHVSHLLSKMGVLDRSQAVMEALRH 204 >UniRef50_C5D120 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D120_VARPS Length = 255 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 33/241 (13%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A +V+I DD L+RRG+ LL+ P EV+ +A DG A++LA RL DV+L+DL+M Sbjct: 15 APKIRVLIADDQALIRRGMAMLLDAAPDIEVLGQAADGVEAVELARRLLPDVVLMDLHMP 74 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ + ++++LT D VF + AGA YLLKD+ E +L+ +RA Sbjct: 75 RKGGVLATREISAALPHTRVMVLTTFDRDDLVFDAVRAGAQAYLLKDASEEEVLDTVRAV 134 Query: 124 AKGSKVFSERVNQYLREREMFGAEE---------------------------------DP 150 +G + ++ + + ++ A+ Sbjct: 135 HRGESRLTPQIARKVMDQFRLLADRVAQEPPSPPAPDPRAAAQAAAPGEPSPSDSMMTMA 194 Query: 151 FSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 LTERE VL +A+G N+QIA+ LN++E T K H+ +++KL+ +R +L L+ Sbjct: 195 TKPLTEREAAVLELIAKGYGNRQIATALNLAEGTAKNHVSRIMQKLHANTRTELAVLVLK 254 Query: 211 Q 211 + Sbjct: 255 K 255 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 4/211 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E +V+++D+HPL+ G++ +LE EV AG + +D+A ++ V+L+D+ Sbjct: 1 MTERPKIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM +SG+D + R + ++++L++ D+ + + + GA GY+LKD + ++ AI Sbjct: 61 NMPKLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G FS V L E+ LT RE D+L + G SN++IA VL I Sbjct: 121 ETVADGGTYFSSGVFDALMGERA----EEGSDPLTPREHDILGLIVAGRSNREIAEVLGI 176 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 S T + H +NL +KL + + L Sbjct: 177 SSATAETHRKNLKKKLGIATTAGLIRYALDH 207 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 5/192 (2%) Query: 25 LLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQII 84 +L+ +P E+V EAG G A++L L DV+++D+++ MSG++ ++ ++I Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 85 ILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMF 144 LT+ + V + AGAD Y++K S L+ AIRA +G V V + + E + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 145 GA-----EEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVR 199 + + LT RE ++L +A+GL+N +IA L ISE+TV+ H N+L KL + Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 200 SRVAATILFLQQ 211 R ++Q Sbjct: 181 DRTELVRYAIRQ 192 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 5/209 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD PL+R G++ L+E + E+ EA DG +A+ L R DV+LLD+ M + Sbjct: 2 IRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLD 61 Query: 67 GLDTLNALRRDGV--TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 GL L A+ D +++++T + VF + GA G++LKD++P LL AIR A Sbjct: 62 GLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVA 121 Query: 125 KGSKVFSERVNQYLREREMFGAEEDP---FSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G + S + + + E + LT RE +V+ + GLSN +IA+ L IS Sbjct: 122 AGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVIS 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 T + H+ ++ KL+ R R +L Q Sbjct: 182 PATARTHVSRVMVKLSARDRAQLAVLANQ 210 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 6/206 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG-M 65 ++++VDDHP++R G+R LL+ EVV + GD L D++L+DL + G Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ R + +++ T D+ +D +DAGA GYLLKDS P L AIR Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G S V L +R P LT RE++VL LA G +N+Q+ L +SE TV Sbjct: 122 GGSALSPAVASRLMDRMRA-----PQESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H+ ++ KL V +R AA +++ Sbjct: 177 KTHVNHIFTKLGVDTRAAAVSRAMKE 202 >UniRef50_Q4V0G8 Two-component system regulatory protein n=4 Tax=Xanthomonas RepID=Q4V0G8_XANC8 Length = 210 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 1/206 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + ++ + DD L+R +R LL+ G VV EA DG + +D ++DV+L D+ M Sbjct: 1 MSALRIALADDQVLVRAALRALLQQQ-GITVVCEADDGQALLDALATHNVDVVLSDIRMP 59 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ G+ L LR G +++LT D S + +AGA G+LLKD+ P+ L EAI Sbjct: 60 GLDGIAALEQLRARGDRTPVLLLTTFDDSELLLRACEAGAQGFLLKDAAPDDLHEAIARV 119 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G + +R R F ++ P ERE+ +L LA G SNK+IA L ++E Sbjct: 120 AAGETLLQPVSTDPVRARYQFRDQQAPRETFNEREVAILRLLAGGYSNKEIARTLFLAEG 179 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFL 209 TVK ++ +L KL R R A + + Sbjct: 180 TVKNYVSTILDKLGTRDRTRAVLKAI 205 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 308 1e-82 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 305 4e-82 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 303 2e-81 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 298 7e-80 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 298 9e-80 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 298 1e-79 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 297 2e-79 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 295 7e-79 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 292 5e-78 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 292 8e-78 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 290 1e-77 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 290 2e-77 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 290 2e-77 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 290 2e-77 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 290 2e-77 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 290 3e-77 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 288 6e-77 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 288 7e-77 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 287 1e-76 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 286 3e-76 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 286 4e-76 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 285 7e-76 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 285 1e-75 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 283 2e-75 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 283 3e-75 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 283 3e-75 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 283 3e-75 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 282 4e-75 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 282 4e-75 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 282 5e-75 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 282 7e-75 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 281 1e-74 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_A3Y699 Putative two component system response regulator... 280 2e-74 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 280 2e-74 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 280 3e-74 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 279 4e-74 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 279 5e-74 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 278 7e-74 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 278 7e-74 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 278 7e-74 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 278 8e-74 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 277 1e-73 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 277 1e-73 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 277 2e-73 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 276 4e-73 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 276 4e-73 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 276 4e-73 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 275 7e-73 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 275 1e-72 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 275 1e-72 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 274 1e-72 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 273 2e-72 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 273 2e-72 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 273 3e-72 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 273 3e-72 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 273 4e-72 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 272 4e-72 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 272 4e-72 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 272 5e-72 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 272 5e-72 UniRef50_UPI0001789139 two component transcriptional regulator, ... 272 5e-72 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 272 6e-72 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 272 6e-72 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 272 7e-72 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 271 1e-71 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 270 2e-71 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 270 3e-71 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 269 5e-71 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 269 6e-71 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 268 7e-71 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 268 9e-71 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 268 9e-71 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 268 1e-70 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 268 1e-70 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 268 1e-70 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 268 1e-70 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 267 2e-70 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 267 2e-70 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 267 2e-70 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 267 2e-70 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 267 2e-70 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 267 3e-70 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 266 3e-70 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 266 4e-70 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 266 4e-70 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 266 4e-70 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 266 5e-70 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 266 5e-70 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 265 5e-70 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 265 7e-70 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 265 7e-70 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 265 8e-70 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 265 9e-70 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 265 9e-70 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 265 1e-69 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 264 1e-69 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 264 2e-69 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 263 2e-69 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 263 2e-69 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 263 3e-69 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 262 5e-69 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 262 6e-69 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 262 6e-69 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 262 9e-69 UniRef50_C1A730 NarL family two-component response regulator n=1... 261 1e-68 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 261 1e-68 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 261 2e-68 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 260 2e-68 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 260 2e-68 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 260 2e-68 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 260 3e-68 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 260 3e-68 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 260 4e-68 UniRef50_Q04VJ6 Receiver component of a two-component response r... 259 4e-68 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 259 4e-68 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 259 5e-68 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 259 5e-68 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 259 5e-68 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 259 6e-68 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 258 6e-68 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 258 6e-68 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 258 8e-68 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 258 9e-68 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 258 1e-67 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 258 1e-67 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 257 1e-67 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 257 1e-67 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 257 2e-67 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 257 2e-67 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 257 2e-67 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 256 3e-67 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 256 5e-67 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 256 5e-67 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 255 8e-67 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 255 9e-67 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 254 1e-66 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 254 1e-66 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 254 2e-66 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 254 2e-66 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 254 2e-66 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 253 2e-66 UniRef50_C8VWU8 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 253 2e-66 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_Q0HL36 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C5D120 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 253 3e-66 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 253 3e-66 UniRef50_A5WD77 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=... 253 4e-66 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 252 5e-66 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 252 5e-66 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 251 8e-66 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 251 8e-66 UniRef50_B4D5C2 Two component transcriptional regulator, LuxR fa... 251 8e-66 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 251 8e-66 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 251 8e-66 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 251 9e-66 UniRef50_UPI0001788591 two component transcriptional regulator, ... 251 9e-66 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 251 1e-65 Sequences not found previously or not previously below threshold: UniRef50_B1VF85 Two-component system response regulator n=3 Tax=... 253 3e-66 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 308 bits (790), Expect = 1e-82, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 3/216 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++I DDH L+R G+R++LEL+P +VV EA G AI++ R VI++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM G++G++ +R++ I+ LT+ D + L+ +G GY+LKD E L++A+ Sbjct: 61 NMPGLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFS---VLTERELDVLHELAQGLSNKQIASV 177 A+G++V V Q + P LT RE ++L ++ G SN++IA Sbjct: 121 YQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARE 180 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 L ISE+TVK H+ ++ K+ V R A + L+ Sbjct: 181 LFISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 305 bits (784), Expect = 4e-82, Method: Composition-based stats. Identities = 77/226 (34%), Positives = 122/226 (53%), Gaps = 13/226 (5%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +++++DDH L R G++++L+ + EVVAE DG A+ L R DV+++D+NM Sbjct: 33 TTMKTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINM 92 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G++ L ++IIL++ D S V + GA GYLLK+ D + L+EA+R Sbjct: 93 PHVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRV 152 Query: 123 GAKGSKVFSERVNQYLREREMFGAEED-------------PFSVLTERELDVLHELAQGL 169 A+G +V L + + P+ +LT RE +VL LA G Sbjct: 153 VAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGK 212 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SNK IA L ISE+TVK H+ N+L+KLNV R A ++ ++ + Sbjct: 213 SNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE 258 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 303 bits (779), Expect = 2e-81, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 117/217 (53%), Gaps = 5/217 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V++ +DH ++R+G+ LL +P EVV EA +G AI + L DV+L+D++M Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 ++G+D L++ +I+IL++ +F + AGA GYL+K S P L++AI A Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAA 120 Query: 124 AKGSKVFSERVNQYLREREMFGA-----EEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G S +++ + + + E +L+ RE +VL +A+G +N++IA L Sbjct: 121 HAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 IS +TV+ H ++ +KL + T +++ + Sbjct: 181 YISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVE 217 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 298 bits (765), Expect = 7e-80, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 1/212 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +++VDDHP++R+G R+LLE + VV EA G AI A +L DVIL+D++M Sbjct: 12 TRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMP 71 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM+G++ A++ + I++LT D + VFAL++AGA GYLLK++ + LL A+RA Sbjct: 72 GMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131 Query: 124 AKGSKVFSERVNQYLREREM-FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G V + + ER P L+ REL+VL A G +NK+IA L+IS Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TV+VH+ N+ KL V SR A + +++ Sbjct: 192 RTVQVHLANIFSKLGVGSRTEAVLYGIKRGWI 223 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 298 bits (765), Expect = 9e-80, Method: Composition-based stats. Identities = 90/223 (40%), Positives = 129/223 (57%), Gaps = 11/223 (4%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +P ++IVDDHPL R G+R LE +P +V EA DG+ A+ LA+ L DVIL+DL++ Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GM+GL+ AL+R A +IILT+ +F I AGA Y KD +PE L++ I Sbjct: 61 GMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 124 AKGSKVFS------ERVNQYLREREMFGAEEDP-----FSVLTERELDVLHELAQGLSNK 172 A+G + + V + ++ + D FS LT RE+++L +A+G SNK Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +IA LNIS+QTVK HI ++LRKL V R A I L+ + Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIK 223 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 298 bits (764), Expect = 1e-79, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 122/215 (56%), Gaps = 4/215 (1%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 V+I DDH L+R+G++Q++EL+P +V+ A DG A+ +L DV+LLD++M Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 +G+ TL L+ T +II+LT + +F I+ GA+GY+LKD++ E L++AIR Sbjct: 69 QNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVY 128 Query: 125 KGSKVFSERVNQYLREREMFG----AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 +G + L + + + LT RE +VL LA+G++NK+I L I Sbjct: 129 QGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFI 188 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SE+TVK H+ N+ +K+NV R A I + + Sbjct: 189 SEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNIKK 223 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 297 bits (761), Expect = 2e-79, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 126/211 (59%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 P +V++VDDHPL+R G+R LLE G+EVV EAGDG AI L L+ DV+++DL M G Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 ++G++ L +++LT+S+ + VFA + AGA GY+LK +D + A+RA A Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 +G V+ V + +R G E PF LT+RE ++L LA G SN +IA L +S++T Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 VK H+ ++ KL V R A + + + Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRARRAGLGE 227 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 295 bits (757), Expect = 7e-79, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 6/216 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V++ DDH L RRG+ +L +P ++VAEA DGA A+ A DV+LLD+ M Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKR 145 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ A++ +A+II+LT+SD +D++ I AGA GYLLK+ + + AIRA Sbjct: 146 TGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHG 205 Query: 126 GSKVFSERVNQYLREREMF------GAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G + S + L + P LTERE++VL +A+GL+N+ IA L Sbjct: 206 GQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLF 265 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 ISE TVK H+RN+L KL + SR+ A + ++++ + Sbjct: 266 ISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE 301 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 292 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 121/218 (55%), Gaps = 6/218 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +++I DDH L+R G+R++L ++P VV E +G A+D + +D++L+D+ Sbjct: 1 MNTS--IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM M+G++ +++ II LT+ D +F LI G GY+LKD P+ L++ I Sbjct: 59 NMPIMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTI 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIAS 176 A+G + + + D LTERE++VL ++A+G SNK IA+ Sbjct: 119 LGVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIAN 178 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L ISE+TVK H+ N+ +K+ V R A + ++++ Sbjct: 179 ALYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLV 216 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 114/216 (52%), Gaps = 2/216 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +V+IVDDH L R G+RQL+E DP EVV EA +G A+ + L DV+L+D+ Sbjct: 22 MGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDI 81 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM GM G+ A+ + +++LT+ D V I AGA YL+K+S PE LL AI Sbjct: 82 NMPGMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAI 141 Query: 121 RAGAKGSKVFSERVNQYLREREMF--GAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A+G + L L++REL +L LAQG +N+QIA L Sbjct: 142 HVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADAL 201 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 N++E TVK ++ L +KL VR R A I + Sbjct: 202 NLAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 290 bits (745), Expect = 1e-77, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 124/207 (59%), Gaps = 1/207 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++V+DH ++RRG+ L+ E+V EA +G A+ DV+L+DL+M M Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ +++ T +I+IL+ V ++AGADGY LK+ PE L+ +I A + Sbjct: 74 DGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYE 133 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G+ F +V L R +E+PFS+LT+RE +VL E+A+G SNK+IA+ L+I+EQTV Sbjct: 134 GNANFHPKVTPALLGRSAV-KKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K H+ N+L KL V R A + ++ Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 290 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 6/212 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +++P +++IVDD L+R+G++ +LE +P EVV +A +G A++L L DV+L+D+ M Sbjct: 5 KSSPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRM 64 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G + + ++++L+ D S + + AGA GYLLKD L +AIR Sbjct: 65 PEMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRF 124 Query: 123 GAKGSKVFSERVNQYLREREMFGA------EEDPFSVLTERELDVLHELAQGLSNKQIAS 176 G G F + L E A S +T RE +VL + G +N++IA Sbjct: 125 GHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQ 184 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 L I+E TVK H+ ++L +LN+++R I Sbjct: 185 QLYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 290 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 69/219 (31%), Positives = 120/219 (54%), Gaps = 9/219 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E ++++ DDH L R+G++++L+++ V EA +G +D L ++IL+D+ Sbjct: 4 MDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDI 63 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM ++G++ ++ ++I LT+ + +F ++ GA G+LLKD + L++AI Sbjct: 64 NMPLLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPF---------SVLTERELDVLHELAQGLSN 171 + KG+ + L A+ P S LT RE ++L +AQG +N Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 K+I+ L ISE+TVK H+ N+LRK++V R A I L+ Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 290 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 114/210 (54%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +V++VDDH ++RRG+R LE+ EVV EA DG I A L DVIL+D+ M Sbjct: 4 TPGRVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKM 63 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G G++ L LR A+++I+T V + AGA GY+ KD DP+ L AIR+ Sbjct: 64 PGTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRS 123 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + V L ++ G LT+RE +VL +A G SN++IA L +SE Sbjct: 124 VHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSE 183 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +TVK H+ N+L KL+V R A + ++ Sbjct: 184 KTVKTHVSNILMKLDVADRTQAALWAVRHG 213 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 5/217 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + P +VMIV+D LMR G+R LL+L+ G EVV EA DG A++ +V+L+D+ M Sbjct: 2 SGPVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ + L R+ IILT D VF + AGA GY+LKD+ E L AI Sbjct: 62 RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKV 121 Query: 124 AKGSKVFSERVNQYLREREMF-----GAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 +G V + + + L+ERE++VL +A G SN++IA L Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 I+E TVK HI ++LRKL R R A + L++ + Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAALYALERGWIE 218 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++++VDDH +R +R +LE + VV EA G ++ D IL+D+ Sbjct: 1 MRKM--IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 N+ G +G++ ++++ ++++ T+ + + + AGADGYLLKDS E ++ AI Sbjct: 59 NLPGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAI 118 Query: 121 RAGAKGSKVFSERVNQYLRE-REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 R +G V R+ + L + E + LTERE ++L EL +GLSNK+IA L Sbjct: 119 RMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALY 178 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 IS++TVK+HI + +KLNV+SR A I ++ + Sbjct: 179 ISDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLV 213 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 288 bits (740), Expect = 6e-77, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 119/216 (55%), Gaps = 6/216 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 P +V++ DD L+R G R +L D G EVV EAGDG A+++A R DV+L+D+ M Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPK 78 Query: 65 MSGLDTLNALR---RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 + GL+ L ++IILT D +F + AGA G+LLK++ PE L+E++R Sbjct: 79 LDGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVR 138 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDP---FSVLTERELDVLHELAQGLSNKQIASVL 178 A+G + S V + + R A P S LT+RE +VL LA+G SN +IA L Sbjct: 139 IVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQL 198 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 + E TVK H+ +L KLN+R R A + + Sbjct: 199 VLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 288 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 16/229 (6%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 Q++I+DDH L R GV+++L ++P EVVA+ DG +A++L + + DVIL+D+NM Sbjct: 6 NENKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G++ L + ++++L++ D S V ++ GA GYLLK+ D + L+EA++ Sbjct: 66 PKVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKV 125 Query: 123 GAKGSKVFSERVNQYLREREMFGAEED----------------PFSVLTERELDVLHELA 166 A+G +V L + ED P +LT RE +VL + Sbjct: 126 VAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMT 185 Query: 167 QGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 G SN+ I L ISE+TVK H+ N+L+K+NV R A + ++ + Sbjct: 186 DGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWVK 234 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 287 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+++DDH ++R G+ LE P EV+ EA DG+ + LA L DVIL+DL M+GM Sbjct: 1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ + R+ +II+LT V+ +I+AGA YLLK S + +AIRA +K Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 126 GSKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G +V + R E P LT+REL++L +A+G +NK+I L I+ +T Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 VK HI N+L KL+V R A + + Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 3/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++ DD L R+G+ LLEL+ VV +A DG AI L L DVIL+D+ M Sbjct: 1 MIRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ + + +I++LT D ++ + AGA GYLLK + L AIR Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 126 GSKVFSERVNQYLREREMFGA---EEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + + + E++ L++RELDVL+ + QG SN++I+ +L+++E Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK ++ LL L VR R A + Q Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 5/218 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + + +V++VDDH L RRGV +L PG VV EAG+G AI+ L DV LLD++M Sbjct: 6 DESVIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 +GL+T +R +I++LTVS+ +F + +GA GY+LK PE L+E +R Sbjct: 66 PVCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQ 125 Query: 123 GAKGSKVFSERVNQYLREREMFGAE-----EDPFSVLTERELDVLHELAQGLSNKQIASV 177 +G V + + AE + + LTERE +VL L+ G SNK+IA Sbjct: 126 VYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARA 185 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 L ISE TV+ H+R++L KL++ +R A ++ A+ Sbjct: 186 LFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIAR 223 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 285 bits (731), Expect = 7e-76, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 29/239 (12%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M TP +V++VDD PL+R G R +LE + +V EA DGA AI +D DV+L+D+ Sbjct: 1 MNGNTPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G++ A+ G A++IILT D FA + AGA +LLKD P L+ A+ Sbjct: 61 RMPVLDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFG-----------------------------AEEDPF 151 R A G V + RV + L E + + Sbjct: 121 RVVASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLL 180 Query: 152 SVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 LT RE+++L +A+GLSN +IA +SE TVK H+R +L KL++R RV A + + Sbjct: 181 EALTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYE 239 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 2/210 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M P +V++VDD ++R G++ + + P E+V EAG G +AI A L DVIL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM M G+ + R A+++ILT D + + + GA GYLLK++ PE +++I Sbjct: 62 NMPQMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 RAGAKGSKVFSERVNQYL--REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 + KG + Q L + + + F +T RE DVL +A G SN++I+ L Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +I+E+TVK H+ ++L ++ V+SR I Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 284 bits (728), Expect = 1e-75, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 118/211 (55%), Gaps = 3/211 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH ++R GVR L +VV EA +G A+++ L D+IL+D+ M M Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + +R + +II LT +F I AGA GYLLKDS P+ LLEAIR +G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDP---FSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + + + E+ LT RELD L +A+G SNK IA + +SE Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TV+ H+ ++L KL++ +RV AT+ L++ A Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALREGIA 215 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 7/213 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 ++++VDDH ++R+G+ LL PG EV+AEAGDG AI L D+ ++DL Sbjct: 5 THTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLR 64 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 + M+G++ + +R + A+I++LT D D++ + AGA GYLLK D + L AIR Sbjct: 65 LPRMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIR 124 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + G V + L ER S LT RELDVL + QG SN++IA+ L+IS Sbjct: 125 SVHAGKSRIPTVVAERLAERMSG-------SELTARELDVLRLIVQGRSNREIAADLHIS 177 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 E TVK HI NLL KL V R A LQ+ Sbjct: 178 EATVKTHINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 4/217 (1%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +V + DD PL+R G R ++ V EAGDG I LA + DVIL+D+ M Sbjct: 2 NKDKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 SG++ + +I+ILT D VF I AGA GYLLKD+ PE L++AIRA Sbjct: 62 PRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRA 121 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVL----TERELDVLHELAQGLSNKQIASVL 178 A+G +F + ++ L T+REL+VL ++A GL N+ IA L Sbjct: 122 AARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKL 181 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +SE TVK H+ +L+K N + R A + ++ Q Sbjct: 182 FVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIVQ 218 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 115/217 (52%), Gaps = 4/217 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLA----NRLDIDVIL 57 P + +VMIVDDH ++R G++ L DPG EV+AEAGDG A++L D+IL Sbjct: 8 PRMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIIL 67 Query: 58 LDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 +DL M GM+G + +R +I+ILT V ++AGA Y+LK E L+ Sbjct: 68 MDLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELI 127 Query: 118 EAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 A++ +G V + V Q L + S +TERE +VL +A+G SNK IA Sbjct: 128 YALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEE 187 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L+IS +TVK H+ NLL K + R I +Q Sbjct: 188 LHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 122/214 (57%), Gaps = 7/214 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +A +V+I DDH + R+G+ ++ DP +VVA+A +G I L DV L+DL Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G+ ++A+ +A+II+LT D+ D++ + AGA GYLLK+++P+ LL AI Sbjct: 61 RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R +G K V L +R L+EREL+VL LAQG+SN IA L+I Sbjct: 121 RTVHRGHKYIPPDVGAKLVQRLSNP-------ELSERELEVLRSLAQGMSNADIADALSI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 E TVK H+ +L KL+V R A I+ +++ Sbjct: 174 GEGTVKSHVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 3/211 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +V++ DDH L+R G+ +LLEL +VV EAGDG + D++LLDLNM Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ + ++ +++ILT+ D V+ +I +GA+GY+ KD PE L AI Sbjct: 61 RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 KG KVF +RE E+ L+ RE +VL LAQG+SNKQIA L ISE+ Sbjct: 121 IKGDKVFPRSTENEVREVV---NEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEK 177 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TVK H+ N+LRKL+V R A I+ L++ Sbjct: 178 TVKNHVSNILRKLSVNDRTQAVIVALKRGLV 208 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 2/215 (0%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +++P +++IVDDHP++R G+R + + + G EVV EA DGA A+ A DV+L+DL M Sbjct: 8 DSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRM 67 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G++ + LR + ++++LT D SDV I+AGA GYLLKD+ E L+ A+RA Sbjct: 68 PTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRA 127 Query: 123 GAKGSKVFSERVNQYLREREMFG--AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G V + V Q L R P LTEREL+VL +A G +N++ A L I Sbjct: 128 AAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFI 187 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SE TVK H+ + K VR R AA ++ + Sbjct: 188 SEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLLK 222 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 282 bits (724), Expect = 5e-75, Method: Composition-based stats. Identities = 85/215 (39%), Positives = 121/215 (56%), Gaps = 3/215 (1%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 A V++VDDH L R+ +R LLE +P V+ EAGDG SA LA R DVIL+D++M Sbjct: 19 PAKAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISM 78 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G+ G+ L+ +IIILT+ V I AGAD YLLK+S+ +++AIRA Sbjct: 79 PGVDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRA 138 Query: 123 GAKGSKVFSERVNQYLREREMFG---AEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G V ++ L EE+ + LTERE+ +L +A G+SNK+IA+ L+ Sbjct: 139 VARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELS 198 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ++E TVK + L KL+V+ R A I L Sbjct: 199 LAESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 3/209 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I DDH ++R+G+R EVV EA G A+ + D++L+DL+M M Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + + II+LT V + AGA Y LKD++PE L++ R G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 127 SKVFSERVNQYLRERE--MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 S + ++ E++ + LT RE DVL E+A G SNK+IA+ L ISE+T Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRG 213 VK H+ NLL KL V R A + ++ Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 1/214 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M P ++++ DDH + R+G+R+LLE G +V EA G + A L D++LLD+ Sbjct: 1 MSTM-PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDI 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M + G+ L + ++I+LT+ +F I AGA YLLKD+D + L++ I Sbjct: 60 QMPEIDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 +G V + + + + LTERE D+L LA+G N+ IA L + Sbjct: 120 ERVHRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFL 179 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 SE+TV + + +KL V +R A ++ +Q+ Sbjct: 180 SEKTVGNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 108/214 (50%), Gaps = 5/214 (2%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P +V+IVDD PL+RRG+ +L DP EVV EA +GA A+ LA RL DV+++D+ Sbjct: 6 PTLPRIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIR 65 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G+ L +++ L+ D V + AGA G+L KDS PE L AIR Sbjct: 66 MPVLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIR 125 Query: 122 AGAKGSKVFSERVNQYLREREMF-----GAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 G + R+ L + LT RE++V +A GL N I+ Sbjct: 126 TVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISR 185 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L+IS TVK +I ++ KL VR R A I+ + Sbjct: 186 TLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYE 219 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 115/217 (52%), Gaps = 8/217 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P A+P +V+I DD L+R G R L+E P VVAEA DG +A+ + RL DV+L+D+ Sbjct: 21 PPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIR 80 Query: 62 MKGMSGLDTLNALRRDG--VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 M M+GL+ + D I+++T D VF + AGA G++LKD+ PE LL A Sbjct: 81 MPVMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 IRAGAKGSKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQ 173 IR A G + + V + L + S LT+RE VL ++A G SN + Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 IA L +S TVK H+ +LL KL R R I + Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYE 237 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 13/221 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++ DDH ++ +G+ L + P E+V EA +G A++ A L D++L+DLNM M Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++ ++++LT S + + GA GY+LKD +P+ L EAIR+ K Sbjct: 62 DGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYK 121 Query: 126 GSKVFSERVNQYLRER----------EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 G+ +++ L R + LT REL+VL L +GLSNK IA Sbjct: 122 GNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIA 181 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFL---QQRG 213 L ++E+TVK H+ ++L KL++ R A + Q +G Sbjct: 182 QTLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPLFQNKG 222 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 6/215 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD L+R G+ +L+ EVVAE +G AI+ A + D+IL+D+ M M Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 67 GLDTLNALRRDGV-TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL +A+ D +I+IL+ D ++ + GA G++LKD+ P+ L+ A+ A+ Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 126 GSKVFSERVNQYLREREMFGAEE-----DPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + + + + L LT RE ++L LA G +N +IAS L I Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 E TVK H+ +LL KL +R R A I + + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIR 217 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 119/217 (54%), Gaps = 5/217 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + ++++ DDH L R+GVR LL + EV EA + A+ LA +L DV+L+D+ M Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 GMS + +R++ ++I L++ D + +D GA+GY+LKDS + L+ AIR Sbjct: 61 GMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREV 120 Query: 124 AKGSKVFSERVNQYLREREM-----FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 +G S R+ L + G F LT+RE ++L LA+G S K+IA+ Sbjct: 121 QRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFF 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +S +TV+ H NL+RKL++ ++ +Q++ + Sbjct: 181 ELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIR 217 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 8/217 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +++I DDH ++R G +L EVVA A DG A DV++LDL+M G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SGL + + +I+ILT+ D +F ++ +GA GY+LK+S E L+ A+R + Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 126 GSKVFSERVNQYLREREMF-------GAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G ++ L + + DPF +L++REL++L +A+G NK IA L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +S +TV+ H +++ KLN++S+ L+++ + Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLE 217 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 109/214 (50%), Gaps = 9/214 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R G+ LL EVV +AG+G A++L LD DV+L+D+ M M Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L G +I+LT V I AGA GYLLKD D VL ++IR A G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 127 SKVFSERVNQYLRERE---------MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 + ++ L R + D S+LT RE D+L LAQG +N++I Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 L +S TVK H+ + KL VR R A + + Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 108/214 (50%), Gaps = 8/214 (3%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 ++ DD ++R G+ LL L PG EVV A DG A+ L DV+L+DL M G++ Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R++ Q+++LT +F + AGA GYL KD+ E +++AI A G Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 130 FSERVNQYLREREMFGA--------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 S +V + L ER + LT RE +VL +A+GLSN++IA L++S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 TVK HI NL K R R A + A+ Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGLAR 215 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 129/210 (61%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+I DDHPL+R G+R++LE + G +VV E GDG AI+++ LD D++L+DLNM G+ Sbjct: 1 MIRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL+ +RR+ T I++LTV D+ VF ++ G GYLLKD DP+ L+++IR Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + S V L + + + L++REL +L + +G SN++I L ISE+TV Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTV 180 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 K H+ ++ RKL V R A + ++ + Q Sbjct: 181 KNHLSSIFRKLAVEDRTQAALKAVKLKLVQ 210 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 4/214 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +++I DD ++R G+ +L L P EV+A A +G A+ L+ D+IL+DL M M Sbjct: 1 MIKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ + +I++LT D +F I AGA GYLLKD L+ AIR Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFS----VLTERELDVLHELAQGLSNKQIASVLNIS 181 G V L + + P S LTEREL VL+ +A G +N IA L +S Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 E TV+ H+ +L KL+V R A +L ++ Q Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVEHGLHQ 214 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 10/216 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + Q+++ DD L G++ LL LD E+V E +G A++ RL ++L+DL Sbjct: 1 MTDR--IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDL 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM M G+ A++++ ++ LT D VF + AG+ GYLLKD+ + L+EAI Sbjct: 59 NMPVMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAI 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPF--------SVLTERELDVLHELAQGLSNK 172 RA + G + + + L++RE VL L++G SNK Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 +IAS L+++E TVK H+ N+L KL V R A ++ Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMA 214 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 7/215 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++ ++++ DDHP++ + + L+ + V+ AGDG A++L ++ DV L+DL Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G D + A+ A+I++LT D D++ + AGA GYLLK ++P LL+AI Sbjct: 63 RMPKMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R KG K + L ER L++REL+VL +A+G +N+QI++VLNI Sbjct: 123 RTVHKGQKYIPPTIAAKLAERMSS-------EELSDRELEVLRLIAKGKNNQQISNVLNI 175 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +E TV+ H N+ KLNV R A + L + + Sbjct: 176 AESTVRFHTNNIFGKLNVSDRTQALVTALNRGIVR 210 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 118/215 (54%), Gaps = 7/215 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP+ P ++++VDDH ++R G+ L L+ VV EAG+ A+ + DV+L+DL Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G +G LRR+ A++++ T D D++ + AGA GYLLK + E LL AI Sbjct: 61 RLPGANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G + S + Q L R ++RE +VL +A+G +NK+IA+ L I Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDV-------SDREREVLQLIARGKANKEIAAALGI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SE+TVK H NL K+ V R AT +++ Q Sbjct: 174 SEETVKRHASNLFVKMGVADRAQATSEGIRRGLIQ 208 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 116/219 (52%), Gaps = 4/219 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI----DVI 56 M +VMIVDDH ++R G+R L L+P EVVAEAG G +AI + DVI Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVI 60 Query: 57 LLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVL 116 L+DL M GM G++T L + +II+LT V+ I+AGA Y+LK E L Sbjct: 61 LMDLMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 117 LEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 + A+ KG V + V+Q L + LTERE +VL +A+G SNK+I Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGE 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 L+IS +TVK H+ NLL K + R +L ++ + Sbjct: 181 ELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWVK 219 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 122/213 (57%), Gaps = 4/213 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++++ DDH ++R+G+R LLE PG +V+ +A DG A+ LA DV+++D+ M Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G++G++ + I+ L++ S V + AGA YLLKDS L+ A+ A Sbjct: 61 GLNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAV 120 Query: 124 AKGSKVFSERVNQYLRE----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 ++G FS +++ L E + ED + +LT RE +VL LA+G +NK++A++LN Sbjct: 121 SEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILN 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +S TV+ H N+L+KLN+ S + +++ Sbjct: 181 LSLYTVETHRGNILQKLNLHSGAELILYAIRKG 213 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 2/209 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++IV+D LMR+G+R +L+L+ VV EA DGA + A RL D+IL+D+ M M+ Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + A+ A+II+LT D VF + AGA GYLLKD+ E LL+ IR G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNISEQT 184 + G L+ERE +VL LAQGLSN++IA L+I+E T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRG 213 VK H+ N+L KL +R A + ++ Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARREGL 214 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 3/211 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P +V+I DDHP+ R+G+R LLE G EVV EA G A+ LA L DV+++DL+ Sbjct: 5 PGNEAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLH 63 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G +G++ + R +++LT+ VFA + AGA GYLLK+S E + A+R Sbjct: 64 MPGGNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVR 123 Query: 122 AGAKGSKVFSERVNQYLREREM--FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A A G ++ + + + ++ F LTERE +VL +AQG SN +IA L Sbjct: 124 AVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLF 183 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +S +TV+ H+ N+ KL+V R A +L + Sbjct: 184 LSPKTVRNHVSNIFMKLHVADRAQAIVLARE 214 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 123/228 (53%), Gaps = 15/228 (6%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E T ++ IVDDH L R G++++ +L+ VVAE G AI +A +++++D+NM Sbjct: 2 EMTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M+G++ L +++IL++ D S + ++AGA G+LLK+ L+ A+RA Sbjct: 62 PDMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRA 121 Query: 123 GAKGSKVFSERVNQYLREREMF---------------GAEEDPFSVLTERELDVLHELAQ 167 AK +V + + ++ + +L+ RE++VLH LA Sbjct: 122 VAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLAD 181 Query: 168 GLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 G SN+ I+ +L ISE+TVK H+ ++LRK++V R A + +++ + Sbjct: 182 GRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 2/215 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +V+I DDH L R G++ LLE + G ++V EA +G A++L + L D++L+DL Sbjct: 1433 MTNKTGLRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M M GLD + + D + ++I+LT S+ D+F I AGA G++ K+ + E + + Sbjct: 1492 SMPVMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLL 1551 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGL-SNKQIASVLN 179 R +G + R+ L + +LT+RE ++L L G+ S K ++ L Sbjct: 1552 RNVIRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLG 1611 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +SE TVK H+RN+L KL+++SR +Q + Sbjct: 1612 VSEHTVKYHLRNILSKLHLQSRAQVVAWAVQHGLS 1646 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 1/211 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++VDDHP++R G+ +LE VV EAGDG A+ L DV+L+DL M G Sbjct: 1 MIRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + ++R A++++LT D + + AGA GYLLK + E + A+R + Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G + V L R +P LT RELDVL +A+GL NK+IA L+I+E+T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 VK H + RKL+V R A +Q+ + Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLVR 211 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 127/217 (58%), Gaps = 4/217 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M +V++ DDH ++R G R+L++ + G VV EA DG A++++ ++ DV+++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M ++G++ +++ T I+ILT ++ + A+++AGA +LLK+ LLEAI Sbjct: 61 AMPRLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQIAS 176 RA G V + + ++ + A E + LT+RE++VL A+G+SNK IA Sbjct: 121 RAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIAD 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 L +S +T++ H+ N+ +KL+V SR A + L++ Sbjct: 181 QLYLSNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 4/215 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +++VDDH L R G+ LL P VV EA G A++ A L DV+L+D+++ Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ G++ ++R ++++LTV D +F I AGA GYL+K+ LL+ +R Sbjct: 61 GIDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGL 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE----DPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G S R+ + E + +P L+ RE++VL +A LSNK+IA+ L+ Sbjct: 121 ARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLS 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ISE TVK H++N+L KL + SR A + Sbjct: 181 ISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 111/212 (52%), Gaps = 4/212 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-G 64 V I DDH ++R+G ++ VV EA DG A DL R++ V+LLD++M G Sbjct: 1 MIDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 +GL + D + +IIILT+ + + +F + GA GY+LK+S EVLL AIR A Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 125 KGSKVFSERVNQYL---REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G + Q L + AE++P+ L+ RE ++ LAQG +NK+ A L IS Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +TV+ H + KL V SR L L+ Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALKYHL 212 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 24/234 (10%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E+ P ++ +VDD PL+R G L+ VV +A DG +DLA + +D+IL+D+ M Sbjct: 7 ESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQM 66 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G+ + + ++I+LT D + V I AGA G+LLKD +PE LL AIR Sbjct: 67 ARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRT 126 Query: 123 GAKGSKVFSERVNQYLREREM------------------------FGAEEDPFSVLTERE 158 G V S R+ + ++ A P + LT RE Sbjct: 127 VHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPRE 186 Query: 159 LDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +D+L +A G SN +I+ +S TVK H+R++L K R RV A + Sbjct: 187 MDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHG 240 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 ++VDD L RRG+ LL + G EVV EAGDG +LA DV+LLD+ M SG++ Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 A++ +A+II+LTVSD +D++ + +GA GYLLKDS E + +A+R A G + Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 130 FSERVNQYLREREMFGAEED----PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 S + L + + + P LTEREL+VL +A+G++N++IA L ISE TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 K H+RN+L KL + SR+ A + ++++ + Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLLE 211 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 4/209 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +++VDDH L+R G+R LLE P VV EA DG A+ L DV+L+D+ M M Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL+ L A+RR+ ++++LT D S V + AG G+LLKD + L +AIR A Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV----LTERELDVLHELAQGLSNKQIASVLNIS 181 G + V + ++ +E P + LT REL+V+ +A+GLSN++IA+VL + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK N+L KL VR R A + ++ Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+ VDDH ++R G+ L EVV E G AI A+ L D+IL+DL M+ M Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++D ++++LT +V+ +DAG D Y+LK + + + +A+R ++G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 VF V +R R AE + +LTERE+++L +A+G SN++IAS +I+ +TVK Sbjct: 123 ESVFEPEVLVKMRNRMKKRAE--LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 H+ N+L KL V+ R A I Q Q Sbjct: 181 THVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 3/214 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + P +V++VDDH ++R+G+R L LD EVV EA +G A+ A RL DV+++DL Sbjct: 5 TPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLM 64 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M G+ LRR ++I LT + V IDAGA GY+LKD+ + L +AI Sbjct: 65 MPVMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIH 124 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A A+G + L + LT +E+ VL +A+G SN+ IA ++ Sbjct: 125 AAARGEVRLHPEAARRLVRDFRTP---EMRETLTPKEVIVLQLIARGYSNRDIARDQGVT 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 E TVK H+ LL KL + SR A + L+ A+ Sbjct: 182 EATVKTHVSRLLGKLGLESRTQAALYALRHGLAR 215 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL Sbjct: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI Sbjct: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI Sbjct: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ Sbjct: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 119/210 (56%), Gaps = 3/210 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++VDDHP++R G+ +L + E V +A DG A++L + DV+LLDL + + Sbjct: 1 MIRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG++ + R + ++LT D + ++AGA GYLLKD+ PE + AIR+ + Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + + +R ED L++RELDVL L +G SNK IA LNISE T+ Sbjct: 121 GGAALQSGIAARVLKRLATEPAED---ELSQRELDVLQLLVRGESNKAIALSLNISENTI 177 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 K H+ ++ KL+VRSR A + LQ+ + Sbjct: 178 KSHVSHIFSKLDVRSRAEAVAVALQRGLVK 207 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 3/211 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +VM+VDDH ++R G++ L L P EVVAEA DG + A + DV+++DL M Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M+G++ AL ++ AQI+ILT + ++ +++AGA GY+LK S + +L AIR Sbjct: 61 KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G V + + + D LT RE ++L LA+G N++IA IS + Sbjct: 121 ALGEYAIETEVEKKVEHHKRHP---DLHDDLTAREREILTLLAKGYDNQRIADESFISLK 177 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TVK H+ N+L KL V R A + Q Sbjct: 178 TVKTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 8/209 (3%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 MIVDD L+R G+ LL L EVV A DG + +A +L ++IL+D+ M ++G++ Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R ++++LT + S +F ++ GA GYLLKD + + +++AI G V Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 130 FSERVNQYLREREMFGA--------EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + + + + LTERE+DVL E+ GL+NK+IA L I+ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK H+ NL+ KL +R R A I ++ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVR 209 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 119/211 (56%), Gaps = 1/211 (0%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 P +V++VDDH ++ G LE +P EVVA A +G A++L DV+L+D++M Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPI 66 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M+G++ ++ + ++++LT+ D + ++ AGA GY+LK+ +++AI+ Sbjct: 67 MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 +G+ F E L +E+ P + L+ RE +L +AQG S+K+IA++LNIS +T Sbjct: 127 QGATYFCESTTSTLFSQEILPVANKP-NPLSRREEAILRMVAQGCSSKKIATLLNISYRT 185 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 V+ H +N+ KL++ S LQ + Sbjct: 186 VETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 116/225 (51%), Gaps = 12/225 (5%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 E P +V +VDD L+R G+ L++ P VVAEAG G A+ + DV+L+D+ M Sbjct: 5 ETAPVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRM 64 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M G++ AL R ++++LT D F I+AGA G+LLKD+ PE LL AIR Sbjct: 65 PEMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRT 124 Query: 123 GAKGSKVFSERVNQYLREREMFG------------AEEDPFSVLTERELDVLHELAQGLS 170 +G V + + L ++ + LT RE +VL +AQG + Sbjct: 125 VHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAA 184 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 N +IA+ L +SE TVK H+ +L KL R RV A ++ + Q Sbjct: 185 NLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLVQ 229 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 6/215 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +VM+VDDH L+R G+R LLE + EVV E G A + LA +V+++DL + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L +++IL++ D VF +++GA GY+LK + E L AIR A+ Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 126 GSKVFSERVNQYLREREM-----FGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G ++ + + E A LTEREL+VL A+GL+N +IA L I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 S +TV+ H N+++KL + RV ++ + Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILK 217 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 8/213 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+I DD L+R ++ +L EVV GDG ++ +R+ DVIL+D+ M M Sbjct: 1 MIKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ A++ +IIILT D +F+ + GA GY+LK E L EAI+ + Sbjct: 61 DGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 126 GSKVFSERVNQYLREREMFGAE--------EDPFSVLTERELDVLHELAQGLSNKQIASV 177 G + + + + + A+ E+ ++ E ++ ++ G+SNK+IA+ Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L +SE TV+ ++ +L KLN+R R I +Q Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 2/210 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +VM+ DDH ++R+G+ LL D VVAEA +G A++ A V ++D++M + Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ + + +I++LT+ + V ++ AGA GYLLKDS E L++A++A A Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 126 GSKVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G +S+ L + +E DP+ LT+RE +V H + G + K IA L+IS + Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 T + H +L KL V + + Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKHNL 210 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 123/208 (59%), Gaps = 5/208 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH ++R+GV +L EV+ EA +G A++L +L D++L+D+NM + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L++ +++ILTVS+ D+F I AGADGYLLK+ PE L+ ++RA G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 127 SKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 S + + + + P L+ RE++VL + GL+ K+IA+ L ++E Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK H+R++L KL++R+R A ++ Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIR 207 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 13/220 (5%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRL--DIDVILLDLN 61 + P +V +VDD ++R G R +++ P VVAEAGDG A+ + L DV+L+D+ Sbjct: 7 SGPIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVR 66 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M GL AL ++++LT D V I +GA G++LKD+ PE +L AIR Sbjct: 67 MPRMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIR 126 Query: 122 AGAKGSKVFSERVNQYLREREMF-----------GAEEDPFSVLTERELDVLHELAQGLS 170 G V + + L E + + LT+RE +VL +A+G S Sbjct: 127 TVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRS 186 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 N +IA+ L ++E TVK H+ +L KL+ R RV A +L + Sbjct: 187 NTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 6/214 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V++V+DH ++R G++ LL EVV E DG +A++ A RL DV+++D+ Sbjct: 1 MTQT--VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM + G+ +R +++IL++ D V I AGA GYLLK S L+ AI Sbjct: 59 NMPKLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAI 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQIAS 176 R A G+ FS V + L + DP LT+RE +VL + +G S+ +IA Sbjct: 119 REVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAK 178 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +L +S +T++ H ++ KL V + ++ Sbjct: 179 ILGLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIR 212 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 272 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 11/213 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V+I DD ++R G++ +L L V+ EA +G I+L DVIL+D+ M + Sbjct: 1 MINVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++ + ++IILT + +F I GADGYLLKD E ++ AIR+ Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 126 GSKVFSERVNQYLREREMFGAEED-----------PFSVLTERELDVLHELAQGLSNKQI 174 G+ + V + + E + LT RE+DV +AQG SNK I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L ++E TVK ++ +L KL + SR + Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVF 213 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 272 bits (697), Expect = 5e-72, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 7/213 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR-LDIDVILLDLNMKG 64 V+I DD P +R ++ L+ +DP EV A A G A+ L L DV+L+D+ M Sbjct: 1 MISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G++ +R ++++LT D + + GA GYLLK+ P+ +++ I+ Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASVL 178 G+ + + + L + P S LT E V+ +A+GLSNK+IA+ L Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 +SE TVK ++ +L KLN+R R I +L++ Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIAIFYLKK 213 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 3/210 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++ DDH ++R G+R LLE VVAEA +G I LA L ++I++D++M M+ Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + D ++I L++ V +++AGA GYLLKD E L+ AI+ Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPF---SVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 S + + + + A S LT RE ++L LA+GLS KQIA+ L++S + Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 TV+ H RN+ +KL V S +++ Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 68/225 (30%), Positives = 121/225 (53%), Gaps = 10/225 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++++ DD P +R+G+R +L++ +V+ EA G A+D+ R D++L+D+ Sbjct: 1 MQTEKMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G +G+ ++ ++++LT D VF I AGA GYLLKD++ + LL I Sbjct: 61 RMPGGTGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDP----------FSVLTERELDVLHELAQGLS 170 RA +G+ +F+ + ++ + ++P LTERE +VL LA G Sbjct: 121 RAMHRGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKR 180 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 N +I+++L ISE T K HI ++++KL R A + ++ + + Sbjct: 181 NHEISAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLVK 225 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 7/221 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + V+IVDD L+R G + +L VV EA +G A + + L V+L+D+ Sbjct: 38 NTSETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIR 97 Query: 62 MKGMSGLDTLNALR--RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 M G+ + ++++LT D V+ + AGA G++LKD++P+ ++ A Sbjct: 98 MPVEDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRA 157 Query: 120 IRAGAKGSKVFSERVNQYLREREMFGAEEDPFSV-----LTERELDVLHELAQGLSNKQI 174 +R A G + + + L E + + LT+RE ++L +A+G+SN++I Sbjct: 158 VRTVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEI 217 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 A L IS TVK H+ ++ KL+ R + + Q Sbjct: 218 ADDLVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQ 258 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 2/211 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD L+R G+ +L+ EV+ EA G A+ +A RL DV+ +D+ M G Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ +++ +I++T D VF ++AGA G LLKDS L+E +R A G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 127 SKVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + + + + VLT RELD + +L QG+SN +IA+ L + T Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 VK H+ + + K +RV I + + Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 4/213 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +++ DDH ++R G++ LLE + EVV EA DG A++L L V++ DL M GM Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG++ + + ++IL++ + V + AGA Y+LKDS E L+ ++R + Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 126 GSKVFSERVNQYLREREMFGAEE----DPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G + S +++ E M + E DP+ LT RE +VLH +AQG + +IA L IS Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TV+VH N++RKL++R++ LQ+ Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQRGII 213 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 4/214 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P ++++VDDH L+R G R +LE +P EVV EA G AI+L RL DV+++DL M G+ Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ ++ + ++++T + + + AGA GY+LK S ++ A+R Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 126 GSKVFSERVNQYLREREMFG----AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G ++ + L + P LT RE +VL +A+G +N +IA L IS Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 T K H++N++RKL V R A + + Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIE 223 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 7/219 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR-----LDIDVILL 58 ++++ DDH L+RRGVR +L+ +P VV EAGDGA AI+ R ++D+ +L Sbjct: 25 PAKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M M+GL L R +I+ILT+ D +F + AGA GY+LK L++ Sbjct: 85 DVAMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 119 AIRAGAKGSKVFSERVNQYLRERE--MFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 A RA +G L E+P + LT RE ++L +A+G S+++IA Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 L IS +TV+ H N+L KL ++ R+ T ++ + Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIE 243 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 4/213 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+I DDH ++R G+ +LL + EVV EAGDG A+D+ + DV+L+D+ M Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 ++G++ ++++ + I+ILT + L++AGA GYLLK + + ++ AIRA Sbjct: 61 RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAI 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFS----VLTERELDVLHELAQGLSNKQIASVLN 179 G V + L ER + ++E L+ RE+++L ++GLSN++IA L Sbjct: 121 KAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLT 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +S +TVK H+ N+ K+ R A + ++ Sbjct: 181 LSMRTVKAHLSNIFNKMRCSCRTEAIVKGFREG 213 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 2/209 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 QV +VDDHP + +G++ L G E+V +G+G AI +L+ +V ++DL + G+ Sbjct: 1 MIQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ +++ ++IIL+ + +V IDAGA Y++KDS PE L+EAI+A + Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G V + V + + +R + LT RE +VL L +G SN+ IA L ISE TV Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRK--TEPLTPREKEVLACLVRGNSNRDIAKTLCISETTV 178 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGA 214 K H+ N+L+KL+V+ R A I ++ Sbjct: 179 KTHVSNILKKLDVKDRTQAVIKAIENNLV 207 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 4/212 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 +V++ DDH ++R+G+R LL + ++V EAG G A+ +A +L DVIL+D+ Sbjct: 26 KSMPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIA 85 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M+GL+ + +A++++L+ V L +AGA GYL+K + L+ A+R Sbjct: 86 MPLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVR 145 Query: 122 AGAKGSKVFSERVNQYLRER----EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 KG+ FS + + LR++ G LTEREL+ L + G NK IA Sbjct: 146 ETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACD 205 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 + IS +TV+ H + ++ KLN+ + T + Sbjct: 206 MGISIKTVEKHRQQVMNKLNIHEVASLTRYAI 237 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +V++VDDHP MR G+ L+ PG +VVAEA DG AI++ + L DV+L+DL M G Sbjct: 18 ATIRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPG 77 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M G++ + A+R+ A++I+L+ D D+ + +GA YLLKD E + +RA Sbjct: 78 MGGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVY 137 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G V + L ER LTERE DVL L +G SNK+IAS L ISE T Sbjct: 138 AGDTSLPRSVAERLTERAQR-------EQLTERERDVLESLIKGRSNKEIASSLCISEDT 190 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 VK H++ L KL VR R A I ++ Sbjct: 191 VKSHLKTLFAKLRVRDRTGAAIEAIRHGIV 220 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 7/214 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V+I DD ++R+G L P VV A G A + L DV+L+D+ M Sbjct: 1 MIDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL + + ++I++T D VF +D+GA G+LLKD+DPE L A+ A+ Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV-------LTERELDVLHELAQGLSNKQIASVL 178 G V S R+ L + L+ RE+DV+ L+QGL N IA L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 ++ + TVK HI N+ +KL VR+RV I + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRNN 214 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 5/210 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+IVDDHP++ G++ +LE EVV G AI A L DVIL+DLNM + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL ++ +++IL++ D+ + + GA GY+LKD PE + AI A + Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + L + LT RE +L ELAQG SNK++A L+IS +TV Sbjct: 143 GEQYLCTGAAGSL-----SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 + H +N+ RKL + S T L+ Q Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGVLQ 227 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 10/218 (4%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH L+R+G++++L + EVV EA DG A+ L D++LLD+NM G++ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GLD L++ +II LT+ D+ + V L+ GA GYLLKD +P VL++AI +G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 127 SKVFSERVNQYLREREMFGA----------EEDPFSVLTERELDVLHELAQGLSNKQIAS 176 + ++ + L +E LT RE+DVL +A+GLSN+ I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L +SE+TVK H+ ++ KL V R A + L+ + Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIV 220 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 1/213 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++++ DDH L R G+R+LLE++ EV+ EA DG + +++ + L DV+L D++M Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ + L+ G + + + +T D + AL G D Y+LK S LL AIR+ Sbjct: 61 KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSV 120 Query: 124 AKGSKVFSERVNQYLRERE-MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 +G +V L E D S LT RE++VL+ ++QGL+N +IA + +SE Sbjct: 121 YRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSE 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +TVK H+ ++L+KL++ R A + ++ AQ Sbjct: 181 KTVKNHVSHILKKLDLVDRTQAAVFAWKRGLAQ 213 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 124/217 (57%), Gaps = 4/217 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++T +++I +DH L+R+G++ L+ +VV EA +G +AI++ + D+ILLDL Sbjct: 1 MTQST-IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDL 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M M+GL T+ L+++ +I+++T+ + + + GADGYLLK DP+ L AI Sbjct: 60 SMPKMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFG---AEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 RA G S ++ L + DP + LT+RE +V +A+G +N+QIA + Sbjct: 120 RAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADL 179 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L IS +TV H NL++KL++ S + L+ Sbjct: 180 LFISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 1/210 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +MI DDH ++R G++ LLELD +V+AEA +G +D DV+LLD+NM M+ Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L AL+ ++++LTV + + + +D G +GY+LKDS+ L +AI A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 127 SKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + L + + E++ LT+RE++VL E+A G N+ IA + ISE+TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 K HI ++ +KL V R A + ++ Q Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNIIQ 212 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 121/221 (54%), Gaps = 12/221 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I+DDHPL R+G+R LE EVV EA +G AI LA RL DV+L+D+N+ G++ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ ++R +I+++V + +F I GA Y KD P L+ IR A+G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 127 SKVFS------ERVNQYLREREMF------GAEEDPFSVLTERELDVLHELAQGLSNKQI 174 + + V + + F+ LT RE+++L +A+GLSNK+I Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 AS L+IS QTVK HI ++L KL V R A I +Q+ + Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWIR 225 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 108/206 (52%), Gaps = 2/206 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++M+VDDH ++R G+R LL D +V EA +GA AI+LA + VIL+DL M + Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ AL+ +++II+LT V I AGA GYLLK+ L AIR A G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + L + A LTERE VL + GLSNK+IA L+++E TVK Sbjct: 125 QPFLHAEAQRTLMRQ--STAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVK 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQR 212 ++ +L KL V R A + ++ Sbjct: 183 GYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 112/207 (54%), Gaps = 2/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH ++R GV+ LL EVVAEAG+G A+ +A + DV ++D+ M M Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + DG + +++ L++ S V ++ GA G+LLKD L+EA+R G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 127 SKVFSERVNQYLREREMFG-AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 ++ + + + + D LT RE ++L LA+G +N+++A L++S +TV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 H ++++ KL +++ ++ Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRNG 208 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 1/211 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+IVDDH LMR G+R +L EVV EA DG+ I +A ++ DV+LLD++M Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 MSGL+ L L + ++I+LT+ + + V GA GY+LK + +VL +A+RA Sbjct: 61 EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFS-VLTERELDVLHELAQGLSNKQIASVLNISE 182 G + + + D L+++E VL +A G +N++IA L IS Sbjct: 121 YSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +TV+ + ++ KLN + R L Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFALDNGL 211 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 104/208 (50%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V I DDHP++R+G++QLL + V EA G ID R DV +LD M G Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + LR+ +++L+V ++ AGA GYL K+S PE L+ AIR A+G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + S + + L G +E L++RE ++ LA G +IA L +S T+ Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGA 214 + + +L KL+++S + + Sbjct: 183 TYRKRILEKLDLKSNAELMRYAIGHQLV 210 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 1/210 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++ +D ++R+G++ ++E D +V EA DG A+ L DV +LD+ M M Sbjct: 1 MIKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ +R +I++LT D V + G +GY+LK+ D E L+ +I++ Sbjct: 61 DGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV-LTERELDVLHELAQGLSNKQIASVLNISEQT 184 G ++V + + EE LT RE +L + +GL+NK+IA L +S T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 VK ++ KL +R R I ++ R Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 2/211 (0%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + P ++++ DDH ++R+G+ LL + VVAEA DG A++ A + +D+ LLDL+ Sbjct: 3 NKKEPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLS 62 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M GL+ L L+ +++ILT+ V + AGA+GYL KD+ L A+R Sbjct: 63 MPHMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALR 122 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A G + ER + L + + EE + L+ RE +VL + G S IA L +S Sbjct: 123 TVAAGGRYLGEREAELLIDGALEEPEEP--AALSTREREVLELIVHGYSLSTIADKLYLS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 +TV + LL+KL+ L+ Sbjct: 181 IKTVSTYKTRLLQKLDCTQNSELVDYALRHN 211 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 2/217 (0%) Query: 1 MPEATP-FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 M E +V++ DDH L+ G+ L++ G VV EA G A+DLA DV+L+D Sbjct: 1 MTEPPATIRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMD 60 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 + M G+ G++ + T +++LT+ VFA + AGA GYLLK + + ++ Sbjct: 61 IEMPGIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRT 120 Query: 120 IRAGAKGSKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVL 178 I A A+G VF V + E+ PF LTERE +VL LA G N +IA L Sbjct: 121 IGAVARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 ++ +TV ++ N+L KL+ R AA + + + Sbjct: 181 QLTPKTVANNVSNILAKLHAPDRTAAILRARRAGLGE 217 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 1/211 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V ++DDH ++R G+RQ L EVV EAG A A+ L V +LD + Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 SG+D +R +ILT D +F+ I AGA GY+LK+ L+ AIR Sbjct: 93 DGSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTV 152 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G + + V + + ER G EDP + L +RE ++L +A GL+N+QI + L +SE Sbjct: 153 ASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSE 212 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 +TVK ++ ++L KL + SR A + ++Q G Sbjct: 213 KTVKNYVSSILEKLGLASRTQAAVYLMKQTG 243 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 P +V+I DDH L+R G+R +L+ DPG EVV EA +G +A+DLA + DV++LD+ M Sbjct: 7 PTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITM 66 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 SGL LR ++++L++ D V + G GYLLKDS E L AIRA Sbjct: 67 PEESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRA 126 Query: 123 GAKGSKVFSERVNQYLRERE--MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G FS V + L E GA +LT RE DVL +A+GL+NK IA+ L I Sbjct: 127 VHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGI 186 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 S +TV+ H +L+RKL + S T L+ Sbjct: 187 SRRTVEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 85/223 (38%), Positives = 116/223 (52%), Gaps = 9/223 (4%) Query: 1 MP---EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVIL 57 MP + V++VDD PL+R+G+R +L PG EVV EA DG SA+ A RL DV L Sbjct: 1 MPDGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTL 60 Query: 58 LDLNMKGMSGLDTLNALRR-DGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVL 116 +D+ M GM G++ + D +++LT+ D VF + AGA G +LKD+ L Sbjct: 61 MDVQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSEL 120 Query: 117 LEAIRAGAKGSKVFSERVNQYLREREMFGA-----EEDPFSVLTERELDVLHELAQGLSN 171 + AI A A G + S V + L E D + LT RE DV L QGLS Sbjct: 121 VAAIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLST 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 + A L + + TVK H+++L RKL VR RV A I + Sbjct: 181 AEAAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLV 223 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 115/221 (52%), Gaps = 18/221 (8%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++ +VDD L+R G R +L+ P VV EA DG SA+D + DV+L+D+ M + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 LDTLNAL--RRDGV---TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++ L R ++++LT D +A ++AGA G+LLKD+ PE LL AIRA Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 123 GAKGSKVFSERVNQYLREREM-------------FGAEEDPFSVLTERELDVLHELAQGL 169 A G V + + L ER + +E VLTERE +V +A GL Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 SN +IA L ++E T+K HI LL KL R RV I + Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDD PL+R +R ++ + EA G A+ L L DV+L+DL M GM Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + R ++++LT D VF + AGA G+L+K+ + +L+A+R A G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 127 SKVFSERVNQYLRE-----REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + + V + L + R P S +TERE +VL + +GLSN +IA L +S Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK +I LL KL R RV I + Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYE 211 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 5/216 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + Q+++VDD PL+RR +R L EL VV EA +G A+ RL +IL+D+NM Sbjct: 6 TSEIQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMP 64 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G+ L A++ + Q+IILTV + V I G Y+LKDS PE L+E + + Sbjct: 65 KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESV 124 Query: 124 AKGSKVFSERVNQYLR----EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 A+G + L + +LT RE +VL + GLSNK+IA LN Sbjct: 125 AEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLN 184 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 I+ +TVK H+ ++L KLNV R A +L +Q+ Q Sbjct: 185 ITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQ 220 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 6/206 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+I DDHPL R+GV +L P +EV+AEAG G A+ +A L D++L+D+ M Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 ++G++ + III+T+ + + VF+ + AGA GY+LKD++ E +L A+RA Sbjct: 61 DLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAI 120 Query: 124 AKGSKVFSERVNQYLREREMFGA------EEDPFSVLTERELDVLHELAQGLSNKQIASV 177 AKG +FS V + + G F LT RE +VL L++G SN ++A Sbjct: 121 AKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAET 180 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVA 203 L +S +TV ++ N+L KL V R Sbjct: 181 LGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 104/215 (48%), Gaps = 9/215 (4%) Query: 1 MPEATPF--QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILL 58 M A P +++IVDD L+R G+R +L DPG VVAE G A+ L DV+L+ Sbjct: 1 MNTAAPTQRRIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLM 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M GL + A +++LT D + + AGA G+LLKD+ P L+ Sbjct: 61 DIRMPVRDGLSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVR 120 Query: 119 AIRAGAKGSKVFSERVNQYLRERE-------MFGAEEDPFSVLTERELDVLHELAQGLSN 171 A+ G S V L + LTERELDV ++AQG SN Sbjct: 121 AVNLAGDGHPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSN 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATI 206 ++I+ L +S TVK HI + K +V +RV I Sbjct: 181 QEISQTLYMSIPTVKTHISRIFTKFDVDNRVQIAI 215 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 120/212 (56%), Gaps = 5/212 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +P +V +VDDH ++RRG+ L P VV EA +G SA+ +A+ DVI++D+ M Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 64 G-MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G + G++T L+R IIIL+ + V + AGA Y+ K+S PE LLEAIR Sbjct: 61 GGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRG 120 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G V + + Q + E + A LTERE +VL +A+GL+N +IAS L +SE Sbjct: 121 AMAGKAVLAPALMQRILEAQTSKAA----DTLTEREREVLKLVAEGLTNAEIASRLTVSE 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TVK H+ ++LRKL + R A I L+ Sbjct: 177 ETVKTHVASILRKLGLAHRTQAAIYALRHGLV 208 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 7/222 (3%) Query: 1 MP---EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVIL 57 MP +V++ DDHP++R+G+ L E+V EA DG + L +++L Sbjct: 10 MPVSKRKKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVL 69 Query: 58 LDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLL 117 +DL+M MSGL+ +RR+ +++IL++ V +I +GA GY+LKD+ L+ Sbjct: 70 MDLDMPTMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELV 129 Query: 118 EAIRAGAKGSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQ 173 AI + G FS ++Q + ++ + A E LT RE +VL +A+G SNK+ Sbjct: 130 RAIESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKE 189 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +AS + + +TV+ H ++ KL++ + T + + Sbjct: 190 MASRMGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIK 231 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 6/212 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++++ DDHP++R G+ +L PG EVV EAGDG + LA+ L DV+LLDL M Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G++ L LR ++++ T D + + GA G LLK + + +A+R Sbjct: 61 GTGGVEVLRRLRGLDDPPKVVVFTAYDD-ERLLEALREGARGCLLKGASRTEIFDAVRTV 119 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G V + + + +E LT REL+VL +A+GL+N+++A L ISE+ Sbjct: 120 HAGGSVIPPEITARVLKEMRGESEP-----LTPRELEVLRLVARGLTNREVARALFISER 174 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 TVK H+ +LL KL +R A + ++ + Sbjct: 175 TVKFHVSSLLAKLRAENRTQAVAIARERGLLR 206 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 3/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++VDD L+R G+R L E EVV EA G +A+ LA L D++L+DL M GM Sbjct: 1 MIRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + + + +++ LT D ++ + AGA G+L+KD+ P LLEAIR A Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDP---FSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G FS V + + + + P LT RE +VL + G +N IA L++ Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TVK HI +L+ K +RV +L ++ Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVR 208 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 3/217 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + +V+IVDDH L R G+ +L +PG EVV EA +GA+A+D R +D++++DL Sbjct: 9 SSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQ 68 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G++ ++ II++TV + + AG GYLLKD+ ++ A+R Sbjct: 69 MPVIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVR 128 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEED---PFSVLTERELDVLHELAQGLSNKQIASVL 178 +G + + R D P LT RE VL L QG +N++IA L Sbjct: 129 QVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIAREL 188 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 IS TVKVH+ +++ KL V R A + L+ + Sbjct: 189 IISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLVR 225 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 1/206 (0%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++VDDH ++R G+R LLE P VV EA D +AI A L D+ILLDL++ SGL Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + +LR A+I++LT+ D V + AGA GY+LK + L+ AIRA +G Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 129 VFSERVNQYLRER-EMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKV 187 + + L E +P+ L+ERE +VL +A+G + +IA LN+S +TV+ Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 188 HIRNLLRKLNVRSRVAATILFLQQRG 213 + + KL +RSR A L Sbjct: 184 YRTRGMEKLGLRSRAALVQFALDHNL 209 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 1/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDD L+R ++ L++L+ VV A +G A + D+IL+D+ M M Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ + +IIILT + + GA GY+LK + ++E++R +KG Sbjct: 61 GVLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFS-VLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + VF + L E+ LTERE +++ + +GLSN++I++ L +SE TV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQ 210 + ++ LL KLNVR R I +L+ Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIFYLK 205 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 1/211 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+I DDH L+R G+R+LLELD +V+ E GDG AI++A + D+I++D+NM Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G+ ++R+ + +II LTV + V ++ AGA Y+LKD L++ I Sbjct: 61 GTDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRV 119 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G V RV L LT+RE DVL L +G +NK++A V+ ISE+ Sbjct: 120 MNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEK 179 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TVK H+ ++ RKL V+ R A I L+ R Sbjct: 180 TVKNHLTSIFRKLGVKDRTHAAIYALKNRIV 210 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+I DDH ++R G+R +LE EVV EA G L L VILLDL+M G Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL+ + LR D +I++LT+ V AGA GYL K+S L+EA+R A Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G S + + L + P L++REL+V + G S QIA+ L +S +TV Sbjct: 121 GGTYVSPAMAEKLALGL-QEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTV 179 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRG 213 + L+ KL +RS A ++ R Sbjct: 180 STYKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 2/210 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 +++IV+DH LMR G+RQ+L P EV EA DG A+ LA L D++L+DL + MSG Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSD--PEVLLEAIRAGAK 125 + L+R+ +++ LT D VF + AGADGY LK + LL A+ + Sbjct: 63 TEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVRD 122 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G+ + + + + L+ERE++VL +A GL+N +I L I+ TV Sbjct: 123 GAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASGTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +VH+ N++ KL V RV A + L++ + Sbjct: 183 RVHVSNIIAKLGVNDRVQAAVRALREGWIR 212 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 5/214 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++M+VDDHP+ R G++ +L + V+AEA DG SAI++A + D+I++D++M G+ Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++R +I++LT+ + + +DAGA GY+LK + L+ A++ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 126 GSKVFSERVNQYL-----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + L +++ + + L++RE +VL +A G + K+I++ L I Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 S +TV + + ++ K+ + + A L+ Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 13/222 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V +VDD L+R G R +L+ V EA DG A++ A +DVIL+D+ M M Sbjct: 1 MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ + +II+LT D+ + V ++ GA G+LLKD+ PE L+ A+R + Sbjct: 61 DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPF-------------SVLTERELDVLHELAQGLSNK 172 S V S L + A + LT RE ++L +A G SN Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +IA L IS TVK H+ +L K R RV A + + Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV 222 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 115/204 (56%), Gaps = 3/204 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R+G+R +L LD +VV E +G A+ LA L DV+L+DL M M Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ +R+D +++ LT S + V + AGA G+LLK+++ + L A++A A G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S L + E LTERE +VL LA+G +NK+IA L I +QTVK Sbjct: 123 QIHVSPAAISRLMGQVR---EPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVK 179 Query: 187 VHIRNLLRKLNVRSRVAATILFLQ 210 ++ ++L KL V SR A + +Q Sbjct: 180 TYVSHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 8/221 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P +V++VDD L R G+ +++ G EVV +A DG+ A+ + + L DV+L+D+ Sbjct: 29 PGTPRIRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVR 88 Query: 62 MKGMSGLDTLNAL------RRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEV 115 M + G++ + ++I+LT D A I GA G+LLKD+ P + Sbjct: 89 MPELDGVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAM 148 Query: 116 LLEAIRAGAKGSKVFSERVNQYLRER--EMFGAEEDPFSVLTERELDVLHELAQGLSNKQ 173 L +AIR G+ V + L + LT +E +VL +A GL+N + Sbjct: 149 LRDAIRTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAE 208 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 IA +SE TVK H+ +LRKL +R RV +L + Sbjct: 209 IARRAFVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLV 249 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 5/216 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +++VDD L+R G++ +L EVV AGDG A+ L D+ V+L+D+ M Sbjct: 1 MNKTNIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ ++ +I+ILT + + + GA GYLLKDS E++ E I+A Sbjct: 61 NCDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKAC 120 Query: 124 AKGSKVFSERVNQYLR-----EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 KG+ V V + E+E+ + + LTERE++++ ++A GLSNK+IA + Sbjct: 121 VKGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKI 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +SE T+K +I +L KL++R R I + Sbjct: 181 YLSEGTIKNNISTILSKLDLRDRTQIAIFAFKNNIV 216 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 118/220 (53%), Gaps = 9/220 (4%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +++VDDH ++R G++ L+ +V EA +G I+ +L DV+++D+ M Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 MSG++ + + + ++++IL++ D + + ++AGA GYLLKD D + ++AI A Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE---------DPFSVLTERELDVLHELAQGLSNKQI 174 G K F+ ++ L + ++ + LT+RE +L + G +N++I Sbjct: 121 YNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREI 180 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 A L IS +T++ H N+++KL V++ V + + ++ Sbjct: 181 ADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 115/205 (56%), Gaps = 1/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +VM+VDDH ++R+G+R LLELD EV EA A+ + + DVILLD + Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ L+R +IIILT V I AGADGYLLK+ + E L+ I+A KG Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 V V + L + + + LT +E+ +L ++ G +NK+IA ++ IS++TV+ Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKEHN-LTPKEVQILDMISVGKANKEIAEIMKISDKTVR 183 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 ++ N+L+KLNV +R A +++ Sbjct: 184 NYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 2/210 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH ++R+G+R LEL G EV EA DGA + A L+ DVILLDL M G+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + LR G TA+++++T + I AGA GY+ KD DP L A+R+ G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 127 SKVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 + V L + GA + LT RE +VL +AQG +N++IA L ++E+T Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 VK H+ N+L KL V R A + ++ A Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRHGIA 217 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 115/214 (53%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V+I DDH ++R G++Q+L EVVA+A + A AI LA +DV++LD+ Sbjct: 1 MSFTSTIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++ SG++ N ++++ +++L++ + + AGA GYL K S + L+ AI Sbjct: 61 SLPDRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R AKG K S V L ++ G E+ L+ RE L +A GLS +IA L++ Sbjct: 121 RTVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSL 180 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 S +TV ++ LL KLN+R T ++ Sbjct: 181 SVKTVSMYRARLLEKLNLRHNAELTHYAIKNNLI 214 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 5/212 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +V++ DDHP++R G+R LLE +P VV EAG A++LA L DV +LD++M Sbjct: 2 TTNKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISM 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G +GL+ L + G+ + +ILTV + ++ AG GY+ K S L+EAIR Sbjct: 62 PG-NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRL 120 Query: 123 GAKGSKVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 A+G + + L + G +DP +L+ERE +VL A G + ++IA L Sbjct: 121 VARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQL 180 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +S +TV+ + +++KL R L+ Sbjct: 181 FLSPKTVETYRHRVMQKLGFSRRSELVRFALR 212 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 1/205 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P +V++ DDH L+R G+R L P EVV EA +G A+ LA+ L DV+L+D++M Sbjct: 2 TKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M+GL+ +R+ ++IL++ D S V ++ AGA GY+LKD ++ AI + Sbjct: 62 VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G FS V L EDP+ LT+RE VL +A+GL NK++A L IS + Sbjct: 122 ASGGYYFSSAVGPTLVGTATSAPIEDPY-GLTDRERQVLTAIAKGLPNKEVAKSLGISVR 180 Query: 184 TVKVHIRNLLRKLNVRSRVAATILF 208 TV+ H NL K+ ++ + Sbjct: 181 TVESHRLNLREKVGNKNAAQLYKVA 205 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DDH + G+R+LL G E+ A DGA A+ A RL DV L+D+ M ++ Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + ++++L++ + + + AGA GY+LK+ + L AI+ A G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 127 SKVFSERVNQYLRE---REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + L R E+ L+ERELDVL L +G + KQIA L+IS+ Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQR 212 TV H R++L KL S T +++ Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 5/215 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 ++++ DDH ++R G++ LL +P EV+ EA DG AID + L D++LLDL M Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPK 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 ++G+D + L + +I++LT+ D + A++ GA GY+LK + LL AIR A Sbjct: 63 LNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVA 122 Query: 125 KGSKVFSERVN-----QYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 +G + ++L E L+EREL+VL LA G +N+ IA +L+ Sbjct: 123 RGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLH 182 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +S +TV+ + ++ KL + R ++ Sbjct: 183 VSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T +V++VDDH ++R+G+R L LD G EVV EA +G A+ A RL +V+++DL Sbjct: 9 MTTPT-VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDL 67 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G+ LRR ++I LT + + V I+AGA Y+LKD+ + L +AI Sbjct: 68 MMPVMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAI 127 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A A+G + L + LT +E VL LA+G SNK IA+ + Sbjct: 128 HAAARGEVRLHPEAARRLVRDFRSP---EMRESLTPKETAVLQLLARGQSNKDIAAEQGV 184 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 SE TVK H+ LL KL + SR A + L+ Sbjct: 185 SEATVKTHVSRLLSKLGLDSRTQAALYALK 214 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 5/212 (2%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +V++ DDHP++R G+ +L ++ EVV EA DG A+DLA L DV++ DL Sbjct: 24 PERPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLR 83 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + G+ + T ++++LT + ++ ++AGA GYLLKD+ L+ IR Sbjct: 84 MPVLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIR 143 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G V + V L + A LT RE++VL +A+GLSN + L IS Sbjct: 144 EAARGQTVLTPSVATRLVSQVGSRA-----DRLTPREVEVLRAVARGLSNAAVGHELFIS 198 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 E TVK H+ KL V R A + + Sbjct: 199 ETTVKTHLIRAFGKLGVNDRTHAVTVATDRGL 230 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 6/208 (2%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++ +D ++R G+R++LE V+AEAGDGA A+ R DV+++D+ M + G Sbjct: 3 RILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDG 62 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 L + +I+ILT+ D ++V++ I+AGA G+LLKD+ PE L+ AIR A G Sbjct: 63 LAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADGD 122 Query: 128 KVFSERVNQYLREREMFGAEE------DPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + S V + L LT RE +L + GLSN IA L + Sbjct: 123 AMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGAT 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFL 209 E TVK H+ LL KL+ +RV ++ Sbjct: 183 ESTVKGHVSRLLMKLDCENRVQLALIAH 210 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 2/215 (0%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 A +V++VDD L+R G+R++L + G +V E DG+ DV+++DL Sbjct: 9 TAAPAIRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLR 68 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M+ + G+ + L +++LT D + + AGA G++LKDS E L+ A+R Sbjct: 69 MRNVDGITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVR 128 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEED--PFSVLTERELDVLHELAQGLSNKQIASVLN 179 A + V + D LTERE DVL +A+G +N +IA+ L Sbjct: 129 AVVRDGAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLG 188 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ISE TVK HI ++ KL++R R AA + Sbjct: 189 ISEVTVKSHINHIFTKLDLRDRAAAIVYAFDHSLV 223 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 5/213 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP P ++++ DDH L+R G+R LLE PG +V EAGDG + L + D+ ++D+ Sbjct: 1 MP--APLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G++G D + R+ +++IL++ A V + AGA GYLLKD+ L A+ Sbjct: 59 TMPGLNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLAL 118 Query: 121 RAGAKGSKVFSERVNQYLREREM---FGAEEDPFSVLTERELDVLHELAQGLSNKQIASV 177 A KG S +++ + R +P LT R +++ +A+G S K+IA + Sbjct: 119 NAVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFL 178 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 LN+S +T++ H +L+ +L + L+ Sbjct: 179 LNLSVKTIETHRMHLMARLGLHDVAGVVRYALR 211 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 8/215 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+I DD PL+R G+ L+ L+P EVV EAGDG +A+ +A L D+ LD+ M G+ Sbjct: 1 MIRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 66 SGLDTLNALR--RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ L +++LT D VF ++AG G+LLKD++PE + AIR Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASV 177 A G+ + + + + + P S LT RE ++L LAQG+SN +IA Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L + TVK H+ +L KL VRSR+ A + Q R Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNR 215 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 114/210 (54%), Gaps = 1/210 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++ DDH ++R G+R+++E +V+ EA +G AIDL DV ++D++M G+ Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ ++ L + ++ILT+ + V I+AGA GY+ K S PE L+ AIR Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 126 GSKVFSERVNQYLREREMF-GAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 GS+ +E + L R L++REL VL LA G +N++IA +IS +T Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 V + LL+KLN+R+ + +Q Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 9/214 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +++I DD ++R G+ LL+L +V+A A +G A + A L+ D++L+D+ M Sbjct: 1 MIKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVS 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ + + ++++LT S+ + ++ GA GYLLKD + +++A+ Sbjct: 61 NGVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 126 GSKVFSERVNQYLREREMFGAE---------EDPFSVLTERELDVLHELAQGLSNKQIAS 176 G V + + + + LTERE++VL EL GL+NK+IA Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L I+E TVK H+ N++ KL VR R A I ++ Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIYSVR 214 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 4/210 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 ++I +DH L+R G++ LL+ P V EA DG A+DL +R +++L+D++M M G+ Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 +++ ++++LTV A V+A + AGADGY+LKD+ + + A+ + G Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 129 VFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 S V+ + + + A + LT RE ++ +A+G N++IA +L +S +T Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 V+ H NL++KL V S L L++ Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 3/212 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +VM+VDDH ++R G+R LLE P VVAEA +G A +LA L V+L+D+ M G+ Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D L +++IL++ V AGA GYLLKD L++A+R A Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 126 GSKVFSERVNQYLREREMFGAEED---PFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + + + E P LT RE +VL +A+G + K A LNI+ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TV H + +++KL +RS T +++ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLI 212 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 17/231 (7%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 + +V++VDD ++R+G+ ++++ EV EA +G A+ + + DV+L+D+ Sbjct: 5 NKKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQ 64 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M MSG+D + R + +++ILT D + I AGA GY+LKDSD + +L+ IR Sbjct: 65 MPNMSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIR 124 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEED-----------------PFSVLTERELDVLHE 164 +G +F + +++ F LT+RE DVL + Sbjct: 125 RAHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQ 184 Query: 165 LAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 L+ G N QIA L IS TVK HI +L+K+ V R A ++ + + Sbjct: 185 LSYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYKIVK 235 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 4/212 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DDH L R +R LLE G EVV EA G A++LA L DV+L+DL M GM Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL + + ++++LT S+ D+F + +GA GY+ KD + E + A ++G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 127 SKVFSERVNQYLREREMFGA--EEDPFSVLTERELDVLHELAQGL-SNKQIASVLNISEQ 183 F+ + + L A E VLTERE ++L L QG+ SNK++A L +SE Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 TVK H+RN+L KL++++R LQ + Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYALQHGLVR 211 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 14/220 (6%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+I DD LMR G+R LL +++AEA +GA AI+LA L D+IL+D+ M M Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ AL + +++ILT V + +GA GY+LKD+ PE L+ A+RA A G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 127 SKVFSERVNQYLREREMFGAE--------------EDPFSVLTERELDVLHELAQGLSNK 172 ++ S + L R+ A DP LT RE ++ +AQG++N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 Q+A L +S TVK H+ + KL+V +RV +L ++R Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNERR 222 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 1/211 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++ I DDH L+R G+R++L EVV EA +GA A+++ DV+LLD+ M Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ + V +I+IL++ + AGA+G++ K + E LL+AI + Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPF-SVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G + +++ ER + E P L++RE V+ LAQG++N++IA VL IS +T Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 V H ++L+KL +R+ T +Q Q Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHGYIQ 211 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 107/212 (50%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++ IVDDH ++R G++ L E+V EA G A+ + + DV+LLD+ ++ Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ G DT + ++++L+ +V A AGA Y+LK+ +++AI+A Sbjct: 61 GIHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 +G + + + S L++RE ++LH + +G +NK+I L +SE+ Sbjct: 121 MQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEK 180 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 TV+ H+ +L KL V +R A ++ + Sbjct: 181 TVRNHVSRILDKLGVSNRSQAAAFMARRSVIE 212 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 6/217 (2%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V + DDHP++ G+R LL DP E+V EA G+ A+ + + D DV ++D+ Sbjct: 1 MTDR--IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDV 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G++GL+ + ++++LTV + ++ V L+ AGA GYLLK S E LL A+ Sbjct: 59 SMPGLNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAV 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE----EDPFSVLTERELDVLHELAQGLSNKQIAS 176 RA A G V + + E L+ RE DVL +AQG SNK+IA Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 ++S ++++ + KL +R+R Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHGW 215 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 3/210 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++VDDH +MR+G++ +L L+ EVVAEA +G AI A+ L DV+++DL M M+ Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + + + ++L++ + V AGA GYLLKD E L+ AI A G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 127 SKVFSERVNQYLREREMFGAEEDPFS---VLTERELDVLHELAQGLSNKQIASVLNISEQ 183 ++ + GA+ + L++RE +VL +A G S K+IA +S + Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 TV V ++++KLN+ + T +++ Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGL 222 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +VMI DD ++ ++ +++L+ EVVA + +G ++++ +L D+IL+D+ M Sbjct: 1 MSKIKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G++ L+ +IIILT D + + GA GYLLKD D + L+ +IR Sbjct: 61 KMDGVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDA 120 Query: 124 AKGSKVFSERVNQYLR----------------------EREMFGAEEDPFSVLTERELDV 161 + + L +R+ E + + LT+RE+++ Sbjct: 121 YNDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEI 180 Query: 162 LHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 + GLSNK+IA L I++ TVK +I N+ KL V+ R +A + Sbjct: 181 AQLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLY 226 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 1/208 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +++++DDH L R G+++LLE++P + EA DG + L R DV+LLD+ M Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 + G+ + LR + + +T + + L G G++LK S LL AIR+ Sbjct: 61 NLDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A+G +V L +E D LT+RE +VL LAQGLSN +I++ +N+SE Sbjct: 121 ARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSE 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +TVK H+ ++L+KL++R R A IL + Sbjct: 181 KTVKNHVSHILKKLDLRDRTQAAILAWR 208 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 114/209 (54%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 ++++VDDH L+R G+R++LE G VV EA G A+ + D++L+D++M G+ Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ + R ++I+L+V + ++ GA GYL KDSDP+ + AIR A Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G K S + Q + + ++ +PF L+EREL++ L +G IA LNIS +TV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGA 214 H + KLNV + V T L L+ + Sbjct: 181 NTHRYRMFEKLNVSTDVELTHLALRHKLI 209 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 14/226 (6%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 ++++ DDHP+ R G+ +LL L+ EVVA+A DG +D+ + + D++LLDL Sbjct: 18 SSKPKIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLK 77 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G+ GL TL L+ ++I+LT SD ++ + G G +LK + E+L+++IR Sbjct: 78 MPGLDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIR 137 Query: 122 AGAKGSKVFSERVNQYLRERE--------------MFGAEEDPFSVLTERELDVLHELAQ 167 G + + E S L++RE +++ +AQ Sbjct: 138 KVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQ 197 Query: 168 GLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRG 213 G NK++A + ISEQTVK H+ N+ KL V R+ + + Sbjct: 198 GFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 7/214 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +++I DDH ++R G+ L+ +P EVVAEA DGA A++L + + D+ L+DL Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M SG+ +R TA +++LT D D+ + AGA GY+LK S E L+ A+ Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA A G + + V L R + F L+ RE+ VL ELA+GL+NK+IA VLNI Sbjct: 121 RAVAAGQRWIPKEVANRLALR-------NSFEQLSPREVQVLSELARGLANKEIADVLNI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +E T K H++++L KL V R A + LQ+ Sbjct: 174 TEHTTKDHLKSILAKLRVADRTEAVTVALQRGII 207 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 10/223 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E P +++V+DH LMR G++ L+ EV+ EA +G AIDLA +L +++L+D+ Sbjct: 1 MSEQ-PIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDI 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + + G+ ++ +++ L+ + V ++ AGADGY LK D + LL I Sbjct: 60 ELPILDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEE---------DPFSVLTERELDVLHELAQGLSN 171 R G ++ L P +VL++RE +VL +++G SN Sbjct: 120 RLIQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSN 179 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ++IA+ L +S T+K ++R +L KL+V RV A +++ Sbjct: 180 QEIANQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 262 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 5/196 (2%) Query: 25 LLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQII 84 +L+ +P E+V EAG G A++L L DV+++D+++ MSG++ ++ ++I Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 85 ILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMF 144 LT+ + V + AGAD Y++K S L+ AIRA +G V V + + E + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 145 GA-----EEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVR 199 + + LT RE ++L +A+GL+N +IA L ISE+TV+ H N+L KL + Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 200 SRVAATILFLQQRGAQ 215 R ++Q + Sbjct: 181 DRTELVRYAIRQGLVE 196 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLD------IDV 55 +VM+VDDH ++RRG+R LE P +V+EA DG A+DL N V Sbjct: 6 TAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHV 65 Query: 56 ILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEV 115 +L+DL M + G++ ++ ++++LT + V A + AGA GY+LKD++PE Sbjct: 66 VLMDLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEE 125 Query: 116 LLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 + A+RA KG V + L R + LT RE D+L + QGLSN++IA Sbjct: 126 VATAVRAAVKGEVHLDAAVARLLARRMASPQVG--VTSLTARERDILVLVGQGLSNREIA 183 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L ISE+T + H+ N+L KL + SR A +L +++ Sbjct: 184 DRLVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLV 222 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 11/213 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V++VDD ++R G++ +L LD ++ EA +G + + + D+IL+D+ M M Sbjct: 1 MINVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ ++ ++IILT + V I GADGY+LKD+ ++++I+A Sbjct: 61 NGVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYN 120 Query: 126 GSKVFSERVNQYLREREMF-----------GAEEDPFSVLTERELDVLHELAQGLSNKQI 174 G + V L ++ +LT+RE+DV +AQG SNK I Sbjct: 121 GDILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDI 180 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 L ++E TVK ++ N+ KL + SR + Sbjct: 181 CHTLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 8/215 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M T ++++VDDH ++R G+ LL G +V+ +AGDGA+AIDL L DV++ DL Sbjct: 1 MSAMT-IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDL 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G + + +R + A++I+LT D +VF + AGA YLLKD +P L++ + Sbjct: 60 RMVPMDGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTV 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G K + L E LT R+L+VL LA+G SN +IA+ L I Sbjct: 120 HAVYAGRKAIDPSIAAKLAEHVAS-------DALTARQLEVLRSLAEGRSNIEIANTLYI 172 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 SE TVK HI+ +L+KL R R A + +++ + Sbjct: 173 SEGTVKAHIKAILQKLGARDRTQAVTIGIKRGLIR 207 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 2/209 (0%) Query: 8 QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSG 67 ++++VDDH L R G+R LL+ G VV EA G + + + DV+ +D M GM+G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 68 LDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGS 127 +T ++I L++ + ++ AGA G+L+KDS + +L AI A G Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 128 KVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 F E V + L R E L+ RE+++L + +GLSN++IA L IS++TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGA 214 H N+L K ++ + + ++ Sbjct: 185 DKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 5/207 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 +A V++VDDH L R G R++LE +VV +A G A+ + NRL V+L+D+ + Sbjct: 2 KAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRL 61 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 GM+G++ +R +++I+T D V D GA GYL K + L+EA+RA Sbjct: 62 PGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRA 121 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G+ V + L P + LT+RE VL LA+G+ NKQIAS L IS Sbjct: 122 VAGGNSVLQPTLMAALL-----AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFL 209 +TV+ H + KL V SR A + + Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRAI 203 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 7/215 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++++VDDH ++R G+ LL VVAEA D A+ + DV L+D+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M G SG++ L +R + A++I+LT D DVF ++AGA GYLLK L A+ Sbjct: 61 RMPGASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R G + + + E S L+ RE++ L LA+G SN++I S L + Sbjct: 121 RKVHAGERCVPQSL-------ETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGV 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +E+T K H++ +L KL R A ++ + Sbjct: 174 TERTAKAHVQAILVKLEAADRAEAVDAAYKRGLLR 208 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 70/226 (30%), Positives = 112/226 (49%), Gaps = 15/226 (6%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +V++VDDHPL R+GVR L + +++ E + L + + DV+L DLN+ Sbjct: 3 ATVKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPN 62 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 M GL+ +RR +++L+V ++ F + AGA Y K+ P+ L +R A Sbjct: 63 MDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVA 122 Query: 125 KGSKVF------SERVNQYLREREMFGAEE---------DPFSVLTERELDVLHELAQGL 169 +G V RV + + FS L++RE++VL +A G Sbjct: 123 RGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGA 182 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +NK IA L IS QTVK HI ++LRKL++ R A + L++ + Sbjct: 183 TNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIE 228 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 110/200 (55%), Gaps = 6/200 (3%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM-KG 64 ++++ DDH ++R G+R LLE + EVV EA +A+ L +D++L+DL G Sbjct: 1 MIRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 SG+D LR ++++T D +D+ + AGA GYLLKD+ P LL A+RA + Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G V S V L R A L+ RE+ VL +A G SN++I L +SE T Sbjct: 121 AGDSVLSPAVASKLMTRVRRPAT-----SLSPREIQVLTLVAAGRSNREIGKELFLSETT 175 Query: 185 VKVHIRNLLRKLNVRSRVAA 204 VK H+ ++ KL V+SR +A Sbjct: 176 VKSHLVHIFGKLGVKSRTSA 195 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 8/216 (3%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 P +V++ DD L+R G+R +++ PG VV EA G A+ +A DV+L+D+ M Sbjct: 10 ATEPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRM 69 Query: 63 KGMSGLDTLNALRRDGV--TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 G+ GL + D +++ILT + VF + +GA G+L K + P+ L++AI Sbjct: 70 PGLDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAI 129 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQI 174 R A+G + S + L R + + +P LT+RE ++ +A G+SN I Sbjct: 130 RTVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDI 189 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 A L +S TVK H+ + + KL R R +L Q Sbjct: 190 ARQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 113/211 (53%), Gaps = 6/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++ DD ++R GVR +L DP EVVAEAGDG AIDL DV+LLD+ M M Sbjct: 1 MIRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL + LRR +++LT + + GA G+LLK DP LL I A A+ Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 126 GSKVFSERVNQYLREREMFG------AEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G+ S RV + + G A + + LT RE DVL + +GLSN QIA L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 + E TVK H+ +L +L R+RV A IL + Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHE 211 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 113/209 (54%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V+IVDDH L+R G+R+LLE +VVA+A G A+ DV+LLD+ M G+ Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGID 67 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G + L++ ++I +T + ++ GA GYL K+S E + AIR AKG Sbjct: 68 GWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKG 127 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 K S + Q + + +++ PF +L+ERE+ V+ + G++ + IA L +S +T+ Sbjct: 128 EKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTIN 187 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 + + KL +++ V T L ++ R + Sbjct: 188 GYRYRMFEKLGIKNDVELTYLAMKHRIIE 216 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E+ ++++VDDHPL RRG+ LL + G E+VAEA DG + LA D++LLD+ Sbjct: 1 MTESN-IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDV 59 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M+G + L + +++LT+S+ + ++ ++ GA GY+LK++D + L+EAI Sbjct: 60 EMPVMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 R G + S +N + + LT+RE DVL +A G+SNK IA + + Sbjct: 120 RQAVAGQQTVSPEMNN--AGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFL 177 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 SE TVK H++N+ RKLN+ +RV A + + Sbjct: 178 SENTVKAHMQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 111/213 (52%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 E + ++ IVDDH ++R G+RQ L VV EA +G AIDL +IDV+++DL+ Sbjct: 26 KEGSMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLS 85 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G SGLD L LR I+IL+ LI GA GYL K+ +P+ ++EAIR Sbjct: 86 MPGQSGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIR 145 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A G + + V L ++ + P L+ERE V +LA+G + IA L++S Sbjct: 146 TIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLS 205 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TV + L+ K+ + S T L+ + Sbjct: 206 VKTVSTYRTRLMEKMGLSSNSDLTYYALKNKLI 238 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 3/207 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V+I DD L+R L+ P V+ A DG A+ +A R+ DV+L+D+ M + Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ + +++ILT D V+A + AGA G+LLKD+ P LL AIR A G Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVL---TERELDVLHELAQGLSNKQIASVLNISEQ 183 + S V + L P L T RE +VL +A+GLSN +I L++S Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQ 210 T+K H+ LL KL R R I + Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYE 277 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 23/232 (9%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R G+ +L+ +P VA+AGDG A+ L +R D DV+L+D+ M M Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 67 GLDTLNALRRDG-----VTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 GL + R +++LT D + V + + AGA G+LLKD+DP++L+ A+R Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 122 AGAKGSKVFSERVNQYLRER------------------EMFGAEEDPFSVLTERELDVLH 163 A +G + + L ER G + L+ERE DVL Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 164 ELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +A+GLSN+ +A+ L +SE TVK H+ ++L KL + SRV A ++ + + Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEAGVVR 242 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 5/209 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + P +V++ DDHP++R+G++ L++ P VVAEA DG A+ L + DV+LLDLNM Sbjct: 2 SEPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G L L A++I+LT + V + AGA G+L KD DP+ L +AIR+ Sbjct: 62 GSDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A G +F+ + P + LT RE +VL +A G SN++IA L+++E+ Sbjct: 122 ADGQVIFAREAVTAM-----TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEK 176 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQR 212 TVK H+ +L RKL V R A + + Sbjct: 177 TVKTHLSSLFRKLGVADRTQAALYAVTHG 205 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 111/212 (52%), Gaps = 4/212 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +++I DDH ++R G+R LLE G EV A +G A+ LA + D++++D+ M M Sbjct: 2 PPRILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G + + ++I L++ + + +AGA Y+LKDS L +AI+A + Sbjct: 61 NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGR 120 Query: 126 GSKVFSERVNQYLREREMFGAEED---PFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G S + + L + + PF ++ RE +VL +A+G+ +QIA L +S Sbjct: 121 GKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSI 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TV+ H RN++ KL + S T +Q+ Sbjct: 181 KTVEAHRRNIMNKLMISSVAGLTRFAIQEGLV 212 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Q+++VDD L+R G+ LLEL+ EV A +G AI A L ++IL+D+ M ++ Sbjct: 3 IQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ QII+LT D + + AGA GYL+KD P+ L +AI+ G Sbjct: 63 GVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAG 122 Query: 127 SKVFSERVNQYLREREMFGAEEDPF-----SVLTERELDVLHELAQGLSNKQIASVLNIS 181 + V L D + LT REL+VL LA+G +NK+IA N+S Sbjct: 123 VFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLS 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 E TVK H+ N+L +L +R R A + ++ + Sbjct: 183 EGTVKNHVSNILMRLGLRDRTQAAVYAVEHGLS 215 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 7/213 (3%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PE +V+I DDHP++ G+ ++ P VV +A G A+ LA + DVIL+DL Sbjct: 18 PEPGVIRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLR 77 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M GMSG++ +R + + +I+LT D+ + AGA YLLK LLEAIR Sbjct: 78 MPGMSGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIR 137 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + G F + + + A L+ RE+D+L + +GLSN++IA LNI+ Sbjct: 138 SVRTGHTYFPRAIRNSVPGKLNRAA-------LSPREMDILRLIVRGLSNQEIADALNIT 190 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TVK H+ +LR+L+V R A ++ +Q+ Sbjct: 191 RGTVKWHVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 111/214 (51%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V+I DDH ++R G++Q+L V+AEA + AI L ++ + DV+LLD+ Sbjct: 2 MSKKPKIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDI 61 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++ SG++ L ++R+ +++L++ + +GA GYL K S L+ AI Sbjct: 62 SLPDRSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAI 121 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 + A+G K + V + L + ++ P +L++RE +A GLS +A+ L++ Sbjct: 122 QTVARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSL 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 S +TV ++ LL K+ ++ T + Sbjct: 182 SVKTVSMYRARLLEKMQLKHNAELTHYAFKHNLV 215 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 11/223 (4%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++ +VDDH ++R G++ +L E+ E+GD A+D +L+ D+++ D+ Sbjct: 1 MKPTNT-KIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDI 57 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G+SG+D + LR+ + IIL+ D V L++ G +GY+LKD LL AI Sbjct: 58 SMPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAI 117 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEE--------DPFSVLTERELDVLHELAQGLSNK 172 A KG S + + + + FSVL++RE ++L +A+G SN+ Sbjct: 118 EAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNE 177 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 I +L IS TVKVH N+++KLN+ + ++ + Sbjct: 178 SIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIE 220 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 115/216 (53%), Gaps = 9/216 (4%) Query: 1 MPEATP--FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILL 58 M + P V+IVDD PL+R G+ +L P VVA+AGDG + L +R DV+L+ Sbjct: 1 MTASEPWTVGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLM 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D+ M M GL LR ++I+LT DA V + AGA G+LLKD+ P+ ++ Sbjct: 61 DIRMPVMDGLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVT 120 Query: 119 AIRAGAKGSKVFSERVNQYLRER-------EMFGAEEDPFSVLTERELDVLHELAQGLSN 171 A+R A+G V S V + L R D ++L RE +V L QG SN Sbjct: 121 AVRQVARGYPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSN 180 Query: 172 KQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATIL 207 +I +VL++S TVK H+ +L KL + +RV +L Sbjct: 181 AEIGAVLHLSVPTVKTHVSGILTKLGLNNRVQIALL 216 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 259 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +V++ DD ++R G+R +L+ PG VV A DG A++LA RL DV L+D+ M M Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 67 GLDTLNALR--RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ AL ++++T D V+A + AGA G+LLKD+ P++L +A+ A A Sbjct: 83 GIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAA 142 Query: 125 KGSKVFSERVNQYLREREMFGAEED----PFSVLTERELDVLHELAQGLSNKQIASVLNI 180 G + + V L P LT+RE VL +A G +N +IA+ L+I Sbjct: 143 CGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHI 202 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 S TVK HI +L+ KL R+RV + Q Sbjct: 203 SLSTVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 259 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 1/208 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++VDDH L+R G+ ++L G +VV +A G + LA L DV+L+D+ M G+ Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ L R +++++TV + L+ AGA GY+ K + E +++AIR Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 126 GSKVFSERVNQYL-REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G + S ++ Q L + + PF L+ERE+ + +A + I+ L +S +T Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQR 212 V + + KL++ S V +L ++ Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHG 208 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 3/210 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V IVDDHP+++ G++ L +V DG+ A++ A L DVIL+D++M M Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G+D + +++IL++ V + I AGA GYLLKD+ E + AI+A A Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G FS + + L + + E LT RE VL LA+G ++K+IA +LNIS +TV Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNES---EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 + H RN+ KL + S ++ + Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGIIK 214 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 4/211 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V++VDDH ++ +G+ LL EV + G A+D DV+LLDL++ Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G + + L+ +A+++ LT+ + + +++AG DGY+LK + + L+ AIR+ +G Sbjct: 63 GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFS---VLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + + + L + ++ L++RE +VL +A G +NK+IA L IS + Sbjct: 122 EVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIK 181 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TV+ HI + KL + R ++ Sbjct: 182 TVETHIARIKEKLGLNRRSELVRYAMRNNII 212 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++VDD L+R G+R L++ VV EA DG A+ LA DV+L+DL M M Sbjct: 1 MIRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 66 SGLDTLNALRRDGV--TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G++T A+R D + +++LT D +DV + AGA GYLLKD + L AIR Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 124 AKGSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G + +V + + R +E+ + LT RELD+L + +GLSN++I L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 +S +T + ++ LL KL VR R +L + Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHK 211 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 8/206 (3%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++VDDHP++R +R LLE +VV A DG AI+L +L ++L+D++M + Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIVD 417 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ +I+ILT + + + +G DGYLLK P L E IR +G Sbjct: 418 GISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHRG 477 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV--------LTERELDVLHELAQGLSNKQIASVL 178 + + ++ L + D S LT REL++L +++GL K IAS Sbjct: 478 GTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASNF 537 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAA 204 +S+ TV+ + + KL VR+R A Sbjct: 538 YLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 1/210 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V+IVDDH L+R G++ LL + EVV EA G A+ L L DV++LD + + Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ L+ + +++LT S V + AGA GY++KD L +IRA A+ Sbjct: 62 DGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVAR 121 Query: 126 GSKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G +V YL ++ + + + L ++L ++ +AQG +N++IA + +SE+T Sbjct: 122 GEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKT 181 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 VK ++ +R++ V++RV A ++ + Sbjct: 182 VKGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 6/216 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P +V I DDH L R+G+ +LELD EVV A +G ID + DVIL+DL M M Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ ++ ++++L++ D + ++ GA+GYLLK++DP+ L+ AI Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV------LTERELDVLHELAQGLSNKQIASVLN 179 F+ ++ + + LT+RE +VL + + L+ ++A L Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 IS +TV+ H +NLL K ++ + L+ + Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 108/209 (51%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+I DDH ++R G+RQ L ++VAEA +G +A++L DV+LLD+ + + Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL+ L ++R ++I ++ ++AGA GYL KDS P +L A+ Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G++ S + + L M + P L+ RE+ VL L++G+ +I ++S +T+ Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQRGA 214 + +L KL++ S T LQ + Sbjct: 181 STYRARILEKLDLASNAEITRYVLQHKLG 209 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 4/208 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD P +R +R LL+ VV A DG AIDL RL VIL+DL+M+ M Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHMD 442 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ +++I T + + GADG+LLK + L IR KG Sbjct: 443 GVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKG 502 Query: 127 SKVFSERVNQYLRERE----MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + + ++ + E+ + LT RE+++L +A+GL IAS L +S Sbjct: 503 GTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSN 562 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 TV+ + KL VR++ A L+ Sbjct: 563 GTVRNYASTAYTKLGVRNKEEAVQKALE 590 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 121/208 (58%), Gaps = 4/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 PF +++VDDH L+R GVR +LE VV EA +GA A+ L + D++L+D+ + GM Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +G++ L R + ++IIL++ D + V + I +GA ++LK + LL+A+R A+ Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GSKVFSERVNQYLREREMFGA----EEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G S +V+ L +R G + P L+ REL VL +A+G ++K IA +L++ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFL 209 QTV+ + + +++KL V + T L L Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLAL 209 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 12/211 (5%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDDH +R +R +LE VV A DGA A++L L+ D++L+DL M M Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++ +I++L+ + ++ +GADGYLLK + L E IR +G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSV------------LTERELDVLHELAQGLSNKQI 174 + ++ + + + + +ED LT+RE ++L LAQG+ K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAAT 205 AS L +S+ TV+ + L KL VR+R A Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAV 593 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V +VDDH L+R GVR LLE DPG VV EA DG A+ + DV+L+DL+M M Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ A+ ++++LT V ++ AGA GY+LKD++P LL A+ A A+ Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G RV L L+ RE VL +AQGL+NKQ+A L I+E+TV Sbjct: 121 GEVPIDPRVAGALL---PSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTV 177 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H+ + R++ V R +A + Sbjct: 178 KAHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 + ++VDD L+R G+R LL+ P EVV EA DG +A+ L RL DV+L+D+ M + Sbjct: 1 MIRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRV 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G++ L ++ILT V+ + AGA GYL+KD +P +L+A+R A+ Sbjct: 61 DGIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAAR 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDP-----------FSVLTERELDVLHELAQGLSNKQI 174 G + + V + +R D + LT RE DVL + GLSN +I Sbjct: 121 GEPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEI 180 Query: 175 ASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 A LN+ TVK HI LL KL +R+RV A IL + Sbjct: 181 ARDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHR 216 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 4/218 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M ++++ DDH ++RRG+R LLEL E+ AEA DG +A+ A L D+++LDL Sbjct: 1 MTTELKTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M ++GL+ + +++++LT+ + V + AG GY+LK L A+ Sbjct: 61 SMPELNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAV 120 Query: 121 RAGAKGSKVFSERVNQYL----REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 A +G F+ R+ + + LT RE ++L LA+G N+ + Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 LNIS +T + H ++ KL + S ++ Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 2/213 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++V+I DDHP+ R +R LL+ DP EV+ EA +G A L ++ D++L+D+NM Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 SGL+ +++ +++IL+VSD +D+ I GA GYLLK+ +P+ + + A Sbjct: 61 KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHAL 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDP--FSVLTERELDVLHELAQGLSNKQIASVLNIS 181 + + L R D +VLT RE +++ + G +N++I+ L I+ Sbjct: 121 LGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIA 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 E TVK H++N+L KL + +RV ++ Sbjct: 181 ENTVKNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 4/214 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E +V+++D+HPL+ G++ +LE EV AG + +D+A ++ V+L+D+ Sbjct: 1 MTERPKIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDI 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 NM +SG+D + R + ++++L++ D+ + + + GA GY+LKD + ++ AI Sbjct: 61 NMPKLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 A G FS V L E+ LT RE D+L + G SN++IA VL I Sbjct: 121 ETVADGGTYFSSGVFDALMGE----RAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGI 176 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 S T + H +NL +KL + + L A Sbjct: 177 SSATAETHRKNLKKKLGIATTAGLIRYALDHGIA 210 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 142/211 (67%), Positives = 166/211 (78%), Gaps = 3/211 (1%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 PF+VMIVDDHPLMRRGVRQLLELD VVAEA +G+ AI LA R D+ILLDLN Sbjct: 6 STTAPFRVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLN 65 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 MKG+SGLDTL ALR +G+ A+IIILTVSDA SDV+AL+DAGAD YLLKDS+PE LL IR Sbjct: 66 MKGLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIR 125 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G VFSE V+ YL DP + LTERELDVL E+ +G+SNKQIA+ L+IS Sbjct: 126 QAAEGRSVFSESVSAYL---STRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHIS 182 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 E+TVKVHIRNLLRKLNVRSRVAAT+L+L+ + Sbjct: 183 EETVKVHIRNLLRKLNVRSRVAATVLYLEYK 213 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 121/213 (56%), Gaps = 4/213 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLD-IDVILLDLNM 62 +++VDDH ++R+G++ LL + V+A+ +G ++ + D+I++DL M Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G++ ++ ++++L+ V ++DAGADGY +KDS+P+ L+ I+ Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 A G ++F V + R+ + L++REL+VL +++GL+NK+IA L +SE Sbjct: 121 IAAGEQIFHPDVMKV---RKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSE 177 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +TVK H+ ++ KL V R A++ ++ + + Sbjct: 178 KTVKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 85/245 (34%), Positives = 120/245 (48%), Gaps = 40/245 (16%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V+IVDD L+R G+ +L PG EVV EA DG A+ +A + DV+L+D+ M M Sbjct: 1 MVKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDM 60 Query: 66 SGLDTLNALRRDGVT--AQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G+ A+ G +I+ILT D V+ + AGADG++LKD+ PE LL A++A Sbjct: 61 DGIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAV 120 Query: 124 AKGSKVFSERVNQYLREREMF--------------------------------------G 145 A G +FS V + L + + Sbjct: 121 ADGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSS 180 Query: 146 AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAAT 205 AE + LT RE DVL +A GLSN +IA L +SE TVK H+ + KLN+ SR A Sbjct: 181 AERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAV 240 Query: 206 ILFLQ 210 +L + Sbjct: 241 VLAYE 245 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 8/222 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 MP++ PF+V + DDHPL+R G+R L + + EA DG A++ + DV L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 +M G+SG+ + LR+ ++IL+ + + AGADGY+LK D L + I Sbjct: 61 DMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSV--------LTERELDVLHELAQGLSNK 172 RA + G S + + EE+ + LT RE +L LAQG NK Sbjct: 121 RAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNK 180 Query: 173 QIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +I++ L IS +TVK HI+N+ +KL V+SR+ A I +++ Sbjct: 181 EISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLI 222 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 1/208 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-G 64 +V++VDDH ++R+G+R LLE ++V E+ G AI AN+L DV+L+DL++ G Sbjct: 1 MIRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G +R+ +I+ILT+ D V I GA GY+LK+S E+L +AI Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 +G + V+Q + + + SVLT RE +++ + G SNK++A L IS +T Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQR 212 V+ H N+++KL + S+ ++ R Sbjct: 181 VENHKTNIMQKLGLDSKHQLIQYAIKNR 208 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +V++ DDHPL R+G++ LE + +V EA DG A L L DV LLD+ M Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G+ ++ + + I+LT D+ V A + AGA G++LK + L++AI+ Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTV 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 A GS V + GA+E+ L+ RE +VL A+GLS+K++A+ L ISE+ Sbjct: 121 ATGSLFLDSEVASVV------GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISER 174 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TV+ H+ ++ KL ++ A +L L+ Sbjct: 175 TVQTHLASVYDKLGAHNKTEAMLLALKHGLM 205 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V++VDDH LMR G+ L+ VV A DGA A++ RL V+L+DL+M + Sbjct: 1 MIDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVL 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + + + ++++LT V +DAGA GY+LKD++P LL AIR+ A+ Sbjct: 61 DGVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTAR 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G RV + + + LTERE +VL + GL+NKQIA L I E TV Sbjct: 121 GHSPLDPRVARTVLHARRSPVRA---AELTEREQEVLALVGHGLANKQIARRLGIRESTV 177 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K H+ ++ +++ VR R +AT+ Sbjct: 178 KAHLTSVFQRIGVRDRTSATLWARTH 203 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 5/205 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++IVDD L+ + ++ LL + +V+A A +GA AI + DV+L+D+ M M Sbjct: 1 MKILIVDDDQLVCQSLQVLLSREQDMDVMATANNGAEAITCCRDILPDVVLMDIQMPVMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ ++++ +I++LT ++ I AGA+GYL+K ++ + + +R G Sbjct: 61 GIQATREIKKEWPQIRIMMLTTFQDEQNIRLAISAGAEGYLIKSTEVSSMAQQLRVLFSG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 + V V + L + + F LT RE D++ + QGLSN++IA L ISE TV+ Sbjct: 121 TSVLDADVLKRLMQ-----PQRKGFEELTPRERDIVELVVQGLSNREIAEQLYISEGTVR 175 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 + +L KL VR R I + ++ Sbjct: 176 NTLSIILEKLQVRDRTQLAIYYWRR 200 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 115/209 (55%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +++I DDHP++R G+R +LE V EA +G +A+ LA +++LD ++ Sbjct: 4 PRIKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPV 63 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 ++GL+ +RR +++I T+ + S + + AGA GYLLK D L+ A+ A Sbjct: 64 LNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALI 123 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 +G FS RV++ + + + G + LT RE +V+ +++G SNK+IA+ L +S +T Sbjct: 124 RGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKT 183 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRG 213 V H +RKL +R+ V ++ + Sbjct: 184 VDSHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P ++++ DD L+R + L +P E+VAEA DG +A+ DV+LLD+ M Sbjct: 1 MNPIRLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMP 60 Query: 64 GMSGLDTLNALRRDGVT--AQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M GL+ L + ++I++T D VF ++ GA G+L KD+DPE +L A+R Sbjct: 61 IMGGLEVLRHI-ETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVR 119 Query: 122 AGAKGSKVFSERVNQYLRERE------MFGAEEDPFSVLTERELDVLHELAQGLSNKQIA 175 A G + S V + + +R G LT RE ++L +A GLSN +IA Sbjct: 120 VVAAGESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIA 179 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 L +S TV+ H+ + KL R R ++ + Sbjct: 180 ERLVVSPATVRTHVGRAMMKLRARDRAQLVVIAYR 214 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 3/212 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + P +V +VDDH ++RRGV LLE + EVV EAG A A+ L DV++LD+ Sbjct: 1 MADMDPVRVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDV 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + G+ LR ++LT D +F I AGA GY+LK L+ AI Sbjct: 61 RLPDGDGVAVCRELRATT-DVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHAI 119 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE--EDPFSVLTERELDVLHELAQGLSNKQIASVL 178 R A G + + + R A +DP + LT +E +L + QG++N+QI + L Sbjct: 120 RTVAAGGSMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAEL 179 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 ++E+TVK ++ NLL KL + RV +L + Sbjct: 180 FLAEKTVKNYVSNLLAKLGMERRVQVAVLATK 211 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 122/213 (57%), Gaps = 8/213 (3%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 + ++++VDDH +MR G+ +P EVVA+ +GA AI+ DV++LDL M Sbjct: 6 RSDKIRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 GMSG+D + ALR + ++++ + A +V+ + AGA G+++K+ E LLEAIR Sbjct: 66 HGMSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRK 125 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + + + ER M + L+ RELDVL +A+G SNK+IA+ L++ E Sbjct: 126 VHAGEQYVPPEIAMRMGERLM--------AQLSPRELDVLKLVAKGRSNKEIAAELHVVE 177 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 T K+H+ N+L KL V R A ++ +++ Q Sbjct: 178 GTAKIHVANILTKLGVSDRTQAIVVAVRRGIIQ 210 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 122/217 (56%), Gaps = 7/217 (3%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 TP ++++VDDH LMRRG++ L L+P EV+ EA DG AI+L +L D+IL+D+++ Sbjct: 8 TPIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPL 67 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 + G+ ++RD +I+ L+ D + V ++ +GADGY LK+ + E LL IR + Sbjct: 68 LDGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLIS 127 Query: 125 KGSKVFSERVNQYLREREMFGA-------EEDPFSVLTERELDVLHELAQGLSNKQIASV 177 G R+ + G+ +VL+ERE +L +A+G SNK+IA Sbjct: 128 HGGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQ 187 Query: 178 LNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 L +S T+K ++R LL KL+V RV A +++ Sbjct: 188 LFLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVREGLI 224 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 118/208 (56%), Gaps = 3/208 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+IVDD+P + G++ +LEL+ EVV+ + AI+ + DV+L+D+ M Sbjct: 1 MKKPKVLIVDDNPAVLDGLKIILELE-NFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMP 59 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M G++ ++ ++IILT + + GADGY+LK SD + ++ +I + Sbjct: 60 VMDGIEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSV 119 Query: 124 AKGSKVFSERVNQYLREREMFGAEE--DPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 G V + + Y+ + +++ + LTEREL++ ++QG SNK+IA +L IS Sbjct: 120 LDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFIS 179 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFL 209 E TV+ +I ++L+KLN+++R + +L Sbjct: 180 EGTVRNYITSILQKLNLKNRTQIAVYYL 207 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 7/211 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 P ++M+ DDH ++R G+ L+L+P E+VAEA G AI DV LLD + Sbjct: 3 QRPIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLP 62 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 M+G++ ALR TA+I+IL+ + DVF + AGA+ YLLK++ ++ AIR Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTV 122 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 GS F ++ L R LT RE VL E+ +G SNK+I L I+E Sbjct: 123 HAGSPYFPPEISAILAARMRR-------EELTPREKSVLFEIVKGSSNKEIGCCLEITES 175 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 VK+H+ +LL+KLN + R A + +Q+ Sbjct: 176 AVKIHVTHLLQKLNAKDRTHAATIAIQRGIV 206 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 2/214 (0%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +V+IVDDH L R+G++++L P + EA G AID+ ++ D++ LD+ Sbjct: 1 MTKR--LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDI 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M ++G++TL ++ +I++L++ + GA GYL K +DPE LL+A+ Sbjct: 59 AMSDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAV 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 KG K ++ L + P L+ERE V +A+G S +I+ L+I Sbjct: 119 DKIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSI 178 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 S +TV + +L KL + + ++ Sbjct: 179 SIKTVSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 1/204 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH + R +R LL DP EVVAEA G + +A+ +D++ +D+ M GM Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L ++I L+ V L+ AGA GY+ K + LL AIR +G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 127 SKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V + + LT RE VL +A+GL++ QI L+I+ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFL 209 +VH RNL+RKL++ + T + Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAI 206 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 3/207 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++ IVDDHP+ R G+ L +D +V +A +G A++ L D++L+D++M M+ Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+D + +I+IL++ D V ++++ G GY LKD + A+R G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 +S ++ L + E D +VLT RE VL LA GL+NK++A L+IS +T++ Sbjct: 121 GIYYSRAISDLLVQ---SSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIE 177 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRG 213 H RN+ KL +++ + Sbjct: 178 THRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 117/209 (55%), Gaps = 1/209 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++M+VDDH ++R G+R+LLE + G EV+AEA G A DVI++D++M GM Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 GL+ L + A++II ++ + ++ + AGA Y+ K + L++A+R A+G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S + Q + + + G+ +DP +L+ RE +V LA G ++I+++L IS++TV Sbjct: 125 KGYLSPGIAQQIALQTLSGS-DDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVA 183 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 + L +KL + S + L ++ + Sbjct: 184 NYQTLLKQKLGITSPIELVRLAIKHGVIE 212 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 14/225 (6%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDI--DVILLDLN 61 T V+IVDD LMR+G+R+LLE++ G +VV +A DG A++ + D DV L+D Sbjct: 1 MTTVSVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDAR 60 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M M G+ + +R + ++LT D VF + AGA GYLLKD PE L+ AIR Sbjct: 61 MPRMDGVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIR 120 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFS------------VLTERELDVLHELAQGL 169 A+G V + L G P + L+ERE +V + G Sbjct: 121 RVARGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTGA 180 Query: 170 SNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +N+++A L I+E T K H+ ++LRKL +R R + ++RG Sbjct: 181 TNREVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRERRGG 225 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 3/208 (1%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V++VDD L+R G+R +LE +VV EA DG+ + L DV+++D+ M + Sbjct: 28 PVSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRV 87 Query: 66 SGLDTLNALRRD-GVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 GL + + D +I++LT + V+ + +GA+G+LLK + P +++A+R Sbjct: 88 DGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIV 147 Query: 125 KGSKVFSERVNQYLRERE--MFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 + +Y+ + E +VLT+RE DVL +++GLSN +IA+ L + Sbjct: 148 SSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGA 207 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQ 210 QTVK H+ ++L KL R R A I+ + Sbjct: 208 QTVKSHVSSVLAKLGARDRTQAVIIAYE 235 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 121/216 (56%), Gaps = 4/216 (1%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLAN--RLDIDVILL 58 M + +V+I DDH ++ G+ L+++ EV+ A +G A L +LD+D+ +L Sbjct: 1 MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60 Query: 59 DLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 D++M GL+T +R + +++ILT+ + S + +I AGA GY+LK+ L+ Sbjct: 61 DVDMPVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVN 120 Query: 119 AIRAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIAS 176 AIR G + FS+ V L + +E A+ +P LT+RE +VL + +G++ K+I+ Sbjct: 121 AIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISK 180 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L I++ TV+ H RNL+ KL V++ + + + Sbjct: 181 QLFIADTTVETHRRNLIDKLEVKNSKELILYVAKNK 216 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 7/211 (3%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 +V+IVDDH +MR G+ + + + +V EA +G ++ + DV+ +D + Sbjct: 2 KRKIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G G ++ LR + A++++L+V + D++ ++AGA GY+ K ++ E +LEAIR Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCV 121 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 G F + L R LT RE VLH + GLSNK+IA+ L++SE Sbjct: 122 VGGETYFPAPIASKLASRRTR-------DALTPREHQVLHHIVAGLSNKEIAAALHMSEA 174 Query: 184 TVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 TVK+HI N L KL+V R A I+ +Q+ Sbjct: 175 TVKLHISNTLAKLHVADRTQAAIVAVQRGII 205 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 12/220 (5%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M E +++I DD PLM +R L+ PG V +G A++ ++ DV+L+D+ Sbjct: 1 MSEE--LRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDM 58 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 M M G++ ++ +++ +T + + + AGA GYLLKD++P +L AI Sbjct: 59 QMPLMDGVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAI 118 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAE----------EDPFSVLTERELDVLHELAQGLS 170 +A +G V S V L S LTEREL VL LA+G S Sbjct: 119 QAVHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQS 178 Query: 171 NKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 N +IA+ L +SE TVK ++ ++ KL VR RV I Q Sbjct: 179 NPEIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQ 218 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 3/209 (1%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 ++IVDD P++ + LL+ G V + A GA A+ +V+L+D+ M Sbjct: 370 AQDKIHILIVDDQPIISDSLEFLLDKY-GFRV-SVANSGAQALKQCEERQPNVVLMDIQM 427 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M+G+ T+ ++ +II++T + +S V I+AGA+GY+LK PE L+ AIR Sbjct: 428 PKMNGITTMKKIKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRL 487 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + S+ V L + ++ P+ LT RE+DVL L +GL K+IA+ L +SE Sbjct: 488 VHLGGTMLSQDVATRLFKEYSPMPKKPPYE-LTPREMDVLGCLKEGLRYKEIAAKLFLSE 546 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 TV+ + ++ KL V R A L + Sbjct: 547 GTVRNYASSIYMKLQVSGRGEAVKKALDE 575 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 + ++VDDH L+R G+ +++ + + + G ++ + DVILLD+NM G Sbjct: 4 NKIRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPG 63 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 +G++TL L+ ++++LTV + + ID GAD Y+LK+S ++ AIR Sbjct: 64 KNGIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVY 123 Query: 125 KGSKVFSERVNQYLREREMFG-----AEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 G K + + + + E + +LT REL++L+E+++GL NK+IA L Sbjct: 124 LGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLF 183 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 +SE+TVK +I ++ +K+ V RV ATI ++ + Sbjct: 184 LSEKTVKNYITSIFKKIEVEDRVQATIYAIRNNIEE 219 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 19/231 (8%) Query: 1 MPEATP-FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 M EA +V +VDDHP R G+R+++ DP VV EA G AI + + D++L+D Sbjct: 1 MSEANGHIRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMD 60 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 +NM GM GL+ L+ + +I+++TVSD + +F I GA GYL K+ P E Sbjct: 61 INMPGMGGLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREY 120 Query: 120 IRAGAKGSKVFSERVNQYLREREMFGA------------------EEDPFSVLTERELDV 161 +RA S+ + L + A + LT RE D+ Sbjct: 121 LRAVVDDEAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDI 180 Query: 162 LHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 L + G SNK+IA +SE TVK H++N+L+KL++ +RV T +Q Sbjct: 181 LERVVTGESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQG 231 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 114/212 (53%), Gaps = 4/212 (1%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK-GM 65 +++I DDH ++R ++ ++ EV+ +A DG A D++L+DL+M G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 +GL T + ++I+LT+ D + + + AGA GY++K+S E+LL+AIR+ Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 126 GSKVFSERV---NQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 G + ++ + + + A E+ L++RE ++L +A G NK+IA L IS Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 183 QTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +TV+VH ++++KL ++ ++++ Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLI 212 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 10/220 (4%) Query: 5 TPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG 64 +V++ DD L+R R LL+ VV EAGDG A+ L R DV+++D+ M G Sbjct: 14 RRLRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPG 73 Query: 65 MSGLDTLNALRRDGVTA---QIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M GL + +++ILT + V + AGA G++ K D + L++A+R Sbjct: 74 MDGLTATAQICA-DPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVR 132 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEE------DPFSVLTERELDVLHELAQGLSNKQIA 175 A G + S + L R + + + LT RE +++ +A GLSN +IA Sbjct: 133 TIADGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIA 192 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 + +S TV+ H++ + KL R R + + A+ Sbjct: 193 DRMYVSPFTVRAHVQRAMTKLEARDRAQLVAIAYRTGLAR 232 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 6/211 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG- 64 ++++VDDHP++R G+R LL+ EVV + GD L D++L+DL + G Sbjct: 1 MIRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 65 MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGA 124 G+ R + +++ T D+ +D +DAGA GYLLKDS P L AIR Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 125 KGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G S V L +R P LT RE++VL LA G +N+Q+ L +SE T Sbjct: 121 DGGSALSPAVASRLMDRMR-----APQESLTPREIEVLALLATGRTNRQVGERLFVSETT 175 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 VK H+ ++ KL V +R AA +++ + Sbjct: 176 VKTHVNHIFTKLGVDTRAAAVSRAMKEGLIR 206 >UniRef50_C8VWU8 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWU8_DESAS Length = 216 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 2/205 (0%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 + +V+I DD L+ G+R +L+ P EVV A +G A++ + DV LLD++M Sbjct: 1 MSKIRVVIADDQNLICDGIRIILDSQPDMEVVGIADNGQKAVEFVSACQPDVALLDISMP 60 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 MSG++ L ++ + +++LT D + +GADGYLLKD E L+ AIR Sbjct: 61 VMSGIEALKEIKVNYPKTVVLMLTTFDPDEYIIGAFRSGADGYLLKDMTAEKLVVAIRNA 120 Query: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSV--LTERELDVLHELAQGLSNKQIASVLNIS 181 G+ + + +++ LT+RE+++ +A+G SN+ I+ L IS Sbjct: 121 FNGNVTMPASIASRIIVHIHEDVKKNSLQDYGLTQREIEIAGLMARGFSNELISITLGIS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATI 206 TVK +I + KL SR A + Sbjct: 181 LGTVKNYISVIYSKLEANSRQEAIL 205 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 8/215 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + ++M VDDHPLM +G+ L++ P +V A+ D+ L+DL Sbjct: 5 MDPSAEIRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDL 64 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 + +G+DT+ ++ ++ A+IIILT+ + ++ + +GA GY+LK+ PE LL+ I Sbjct: 65 RLPDGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVI 124 Query: 121 RAGAKGS-KVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLN 179 R G K + L + LT RE +VL +++G SNK++ + L+ Sbjct: 125 RKVHSGEKKRLHPVIAATLADHFGE-------ENLTSRETEVLQLISEGNSNKEVGNRLS 177 Query: 180 ISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ISE+TVK H++N+L KL R A + +++ Sbjct: 178 ISEETVKGHVKNILGKLGANDRTQAVSIAVRRGII 212 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 3/209 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 ++I DDH L+R G++ LL+ EVV EA DG I + LD ++++LD+ M Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 64 GMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 SG++ + +++ + I+L++ D V + +GA YLLK++D E +++A++A Sbjct: 62 KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAV 121 Query: 124 AKGSKVFSERVNQYLREREMFG---AEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 + G K FS + + LT+REL+VL E++ GLS K IA L I Sbjct: 122 SAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFI 181 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFL 209 S +TV+ H NL++KL+V + + Sbjct: 182 SVRTVETHRINLMKKLDVHNSAELIKKAM 210 >UniRef50_Q0HL36 Two component transcriptional regulator, LuxR family n=11 Tax=Gammaproteobacteria RepID=Q0HL36_SHESM Length = 225 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 112/209 (53%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 P A +V +V+D L+R+G+ L+ + EV +A +G A+ +DV+L D+ Sbjct: 13 PTARTIRVGLVEDQQLVRQGIASLIAISQHIEVSWQAENGQEALKRLQTDAVDVLLSDIR 72 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M + GL L LR + +I+LT D S + AGA+G+LLKD + LLEAI Sbjct: 73 MPVLDGLSLLKQLRAAQNSIPVIMLTTFDDSELFLNSLQAGANGFLLKDVSLDKLLEAIE 132 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 A+G + V + +++ +L+ERE ++L +A G SNK+IA+ + ++ Sbjct: 133 IVAQGGHLIEPSVLEQMQQSSATAQSGPTHYLLSEREREILGFMAGGFSNKEIANAVFLA 192 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQ 210 E TVK H+ +L KL+ R R A + LQ Sbjct: 193 EGTVKNHVSTILAKLDCRDRTQAVLKGLQ 221 >UniRef50_C5D120 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D120_VARPS Length = 255 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 119/242 (49%), Gaps = 33/242 (13%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 A +V+I DD L+RRG+ LL+ P EV+ +A DG A++LA RL DV+L+DL+M Sbjct: 14 AAPKIRVLIADDQALIRRGMAMLLDAAPDIEVLGQAADGVEAVELARRLLPDVVLMDLHM 73 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G+ + ++++LT D VF + AGA YLLKD+ E +L+ +RA Sbjct: 74 PRKGGVLATREISAALPHTRVMVLTTFDRDDLVFDAVRAGAQAYLLKDASEEEVLDTVRA 133 Query: 123 GAKGSKVFSERVNQYLREREM-------------------------FGAEEDPFS----- 152 +G + ++ + + ++ E P Sbjct: 134 VHRGESRLTPQIARKVMDQFRLLADRVAQEPPSPPAPDPRAAAQAAAPGEPSPSDSMMTM 193 Query: 153 ---VLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 LTERE VL +A+G N+QIA+ LN++E T K H+ +++KL+ +R +L L Sbjct: 194 ATKPLTEREAAVLELIAKGYGNRQIATALNLAEGTAKNHVSRIMQKLHANTRTELAVLVL 253 Query: 210 QQ 211 ++ Sbjct: 254 KK 255 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 1/207 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V +VDDH ++RRG+ LLE +P +V EA A+ DV +LD+ + + Sbjct: 3 ISVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L + ++LT +F I AGA G++LK L+ A+R G Sbjct: 63 GVELCRELLSTVPGLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGSG 122 Query: 127 SKVFSERVNQYLREREMFGAEE-DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 + + L R EE DP S L+E+E VL + +GL+N++IA+ L ++E+TV Sbjct: 123 GSLLDSKTTSALMNRIRREREESDPVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 K ++ LL KL ++ R A +L + R Sbjct: 183 KNYVSRLLGKLGMQRRTQAAVLATELR 209 >UniRef50_B1VF85 Two-component system response regulator n=3 Tax=Corynebacterium RepID=B1VF85_CORU7 Length = 264 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 45/254 (17%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 V + DD L+R G +L+ V EA DGA A +LA L +D+IL+D+ M M Sbjct: 1 MITVGLADDQQLVRAGFAMVLDSQDDLSVAWEAADGAEACELAVALPVDMILMDVQMPTM 60 Query: 66 SGLDTLNALRRDGVTA-------QIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLE 118 G+ + + ++++LT D+ + V + AGA G+LLKD+DPE L+ Sbjct: 61 DGIAATRRILNELSPTGPAGEPTRVVVLTTFDSDNYVLGAVTAGASGFLLKDADPEELIN 120 Query: 119 AIRAGAKGSKVFSERVNQYLREREMFGAEED----------------------------- 149 A+R + + V S L +R Sbjct: 121 AVRTVGESTAVISPAATAKLIQRLRADGAAANPEGPKSTPAPGVPPQNTAAPQPAAARPA 180 Query: 150 ---------PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRS 200 LT RE ++L +A+G SN++IA L IS TVK H+ +L K R Sbjct: 181 TPDAEDDLGLVDPLTRREREILCLIAKGQSNQEIAEKLFISLPTVKTHVGRVLMKTGSRD 240 Query: 201 RVAATILFLQQRGA 214 RV A + L+ Sbjct: 241 RVHAVLFALKHHLV 254 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 +++ +D ++R+G++ ++E +V+ EA +G A+DLA R ID++L+D+ M M+G+ Sbjct: 4 ILLAEDQQIVRQGLKMMIEHRQRYQVI-EAENGQEAVDLAGRHVIDLVLMDVRMPVMTGI 62 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + L +I++LT + AGA GY+LKD+D E L I G Sbjct: 63 EATKRLIERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLGEL 122 Query: 129 VFSERVNQYL---REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V +V + + E++ L ERE +++ + QG +N +IA+ L +S TV Sbjct: 123 VLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVGTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQ 211 K +I L KL VR R I ++ Sbjct: 183 KNYISQLFIKLGVRDRTQLAIFAVKH 208 >UniRef50_A5WD77 Two component transcriptional regulator, LuxR family n=3 Tax=Moraxellaceae RepID=A5WD77_PSYWF Length = 219 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 126/210 (60%) Query: 2 PEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLN 61 +P ++++VDDHP++RRG+ LL L+P +VVA+ G A+ + +D+++LD N Sbjct: 7 TATSPAKILLVDDHPMLRRGMADLLSLEPDFQVVADVSSGEEALSYLAQNQVDLVILDQN 66 Query: 62 MKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 M G+SGLDT +R G A++++ TVSD+ D+ + G +GYLLKD PE + IR Sbjct: 67 MPGLSGLDTAEQIREQGHQAKVLMFTVSDSGDDIHNALKLGVNGYLLKDMQPEQVALDIR 126 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +G V S R+ L + +D S LT REL V+ +A+G SNK I + L IS Sbjct: 127 KALRGELVVSSRLAAVLAQALRTPNLDDIVSNLTSRELQVVKMIAKGHSNKMIGNELGIS 186 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATILFLQQ 211 E TVKVH++++L K N+R+RV + + Sbjct: 187 ESTVKVHVKHILNKTNLRTRVDVAVWAVNN 216 >UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=Streptomyces RepID=Q06YY8_9ACTO Length = 223 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 8/217 (3%) Query: 7 FQVMIVDDHPLMRRG-VRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++ DD ++RRG VV EA DGA AI +A RL DV L+D+ M + Sbjct: 3 IKVLLADDQAMIRRGPCGSSWRTSRDITVVGEAEDGAEAIAMARRLRPDVCLVDIRMPKL 62 Query: 66 SGLDTLNALR--RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 G++ AL + ++I++T D V+ + GA G++LKD+ P +L+EA+RA Sbjct: 63 DGIEVTRALAGPKAADPMRVIVVTTFDLDEYVYGALRGGAAGFVLKDAGPALLIEAVRAA 122 Query: 124 AKGSKVFSERVNQYLR-----EREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 G + S V L + M S L+ R L+V+ +A+G +N++IA+ L Sbjct: 123 YNGEALVSPSVTLRLLKHLNESQAMPRGGAARSSELSGRALEVVRAIARGRTNQEIAAEL 182 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 IS TVK H+ + KL VR+R + + R + Sbjct: 183 FISLSTVKSHLSGIQTKLGVRNRTEIAVWAWENRVVE 219 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%) Query: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 V+IVDDHPL R+G+R+L+E +VVAEA G AI A+ + L+D+ + G++GL Sbjct: 13 VLIVDDHPLFRQGLRRLIEEGGAFKVVAEATSGHEAIREADIHRPSIALIDIQLPGVTGL 72 Query: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 + L++ + IIIL++ +F + AGA +L KD + + L+ ++ +G + Sbjct: 73 NVARILKKQHPSMHIIILSMHVDDERLFEAVRAGASAFLTKDIEAQELISSLDRVVQGEQ 132 Query: 129 VFS------ERVNQYLREREMF---------GAEEDPFSVLTERELDVLHELAQGLSNKQ 173 + + + + A + L+ RE++VL +AQGLSNK+ Sbjct: 133 LINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVAQGLSNKE 192 Query: 174 IASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 IA L I+EQTVK H+ ++LRKL V RV A + ++ + Sbjct: 193 IAEALFITEQTVKNHMTSVLRKLQVNDRVQAVLCAVRNGWVE 234 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 1/191 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +VMIVDDH ++R G++ L+EL V+AEAG G A+++A DV+++D+ M GM Sbjct: 1 MVRVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 SG+D A+ ++I+LT +++ I AGA GY+LK +D LLEAI A+ Sbjct: 61 SGIDACRAIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAAR 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSV-LTERELDVLHELAQGLSNKQIASVLNISEQT 184 + V + +R A + L+E E +L +A+G NK+IA L ++E+T Sbjct: 121 NESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKT 180 Query: 185 VKVHIRNLLRK 195 V+ ++ + K Sbjct: 181 VRNYVSKIFSK 191 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 M+ DDH ++RRGVR L+E PG V EA +G A+ LA L DV++LD+ M ++GL+ Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 +R +II+LTV D+ + +DAGA GY+LK+ L++AI A +K + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 130 FSERVNQY-----LREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 R + +ER + + LT+RE +VL LAQG SN+++A L+IS +T Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 V+ H N++RKL S V ++ + Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIVE 211 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 3/209 (1%) Query: 10 MIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLD 69 MIVDDH L+R G++ LL+ V AEA G A+ L + ID++++D++M GM GL Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 70 TLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKV 129 + +R +I++L++ + ++ + GA GYL K S L +A++ ++G + Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 130 FSERVNQYLRE---REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S Q L + R A +DP SVLT RE +V EL G + +IA L++S +TV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 H +++ KL+ R L L+ Q Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGLLQ 209 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 1/205 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++++ DDH + R +R +LE +PG +V EA +G IDL + +D+ +D+ M GM+ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ L ++I L+ V L++AGA GY+ K E LL AI + Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 127 SKVFSERVNQYLREREMFGAEED-PFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 V + + A +D +T RE VL +A+G ++ +IA L+++ TV Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTV 182 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQ 210 +VH RN++RKL++ S T ++ Sbjct: 183 EVHRRNIMRKLDLHSVAELTKYAIR 207 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 110/216 (50%), Gaps = 9/216 (4%) Query: 1 MPEAT-PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLD 59 M E+ P V++VDDHPL+R G+ LL P ++ EA DG AI RL DV+L+D Sbjct: 1 MTESPAPIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMD 60 Query: 60 LNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEA 119 L M + G++ + +R A+II+LT + AGA YLLKD L++ Sbjct: 61 LQMPRLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDT 120 Query: 120 IRAGAKGSKV-FSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 IR A G + V + + L+ RE +VL +A GLSNK+I + Sbjct: 121 IRMVAGGRRAPIPPAVAASIAAHVVE-------DRLSPRETEVLRHVAGGLSNKRIGERM 173 Query: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 ISEQTVK H+++L+ KL V R A L++ Sbjct: 174 QISEQTVKAHMKSLMDKLGVGDRTHAVTQALRRGII 209 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 10/213 (4%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 P V++VDD P++R G+ +L+ V A DG A++ RL DV+L+D+ M Sbjct: 14 PISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRR 73 Query: 66 SGLDTLNALRRDGV----TAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIR 121 GL L L R G+ +++++LT D + V + AGA G+LLK+S E L EA+R Sbjct: 74 DGLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVR 133 Query: 122 AGAKGSKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIA 175 A A G S V + + E + G LTERE+DVL + GLSN +IA Sbjct: 134 AAAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIA 193 Query: 176 SVLNISEQTVKVHIRNLLRKLNVRSRVAATILF 208 L +S TVK H+ +L K +SR A +L Sbjct: 194 GELVVSLHTVKTHVSRVLMKTGCQSRAQAAVLA 226 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 4 ATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMK 63 A+P +V ++DDH L R+GV Q++E DP VV EA G+ + LA L DV+L+DLNMK Sbjct: 21 ASPTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMK 80 Query: 64 GMSGLDTLNALR-RDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 G++G++TL + + A+ ++LTVSDA D+ + AGADGYLLKD +PE L +++ Sbjct: 81 GLNGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKK 140 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFS--VLTERELDVLHELAQGLSNKQIASVLNI 180 G V + + + L++ + LT+RE ++L LA GL+NK IA L I Sbjct: 141 VISGMTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGI 200 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 S+ TVKVHI++LL KL + SR+ A + +++ Sbjct: 201 SDTTVKVHIKHLLSKLKLTSRLEAAVWAHRKK 232 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 116/213 (54%), Gaps = 6/213 (2%) Query: 3 EATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 P +V+I DD PL+ + +L +VVA A +G AI+ A + IDV +LD+ M Sbjct: 6 NEQPIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQM 65 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 ++G+D A+++ + +I++LT D+ V ++ G G+LLKD+ PE L++AI Sbjct: 66 PYVNGIDAAQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAINR 125 Query: 123 GAKGSKVFSERVNQYLREREMFGAEEDP------FSVLTERELDVLHELAQGLSNKQIAS 176 G+ V S V +Y+ + + P F LT REL+VL +AQ +N +IA+ Sbjct: 126 IYHGASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEIAN 185 Query: 177 VLNISEQTVKVHIRNLLRKLNVRSRVAATILFL 209 L+I +TVK ++ L+ K+ VR RV + Sbjct: 186 YLHIGSETVKTYVSRLISKIGVRDRVGLAVWAH 218 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 131/215 (60%), Gaps = 6/215 (2%) Query: 4 ATPF-QVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNM 62 P V+++DDH L R+GV QL++++P VV EA G +DLA RL DV+L+DLNM Sbjct: 1 MEPVNTVLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNM 60 Query: 63 KGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 M+G++TL +R+ GV A+ ++LTVSD DV A + AGA GYLLKD +PE L ++ Sbjct: 61 PDMNGIETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQK 120 Query: 123 GAKGSKVFSERVNQYLREREMFGAE-EDPFSVLTERELDVLHELAQGLSNKQIASVLNIS 181 +G+ V SE V L G S L+ RE +VL L +G+ NK+IA L+IS Sbjct: 121 ALQGTAVLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDIS 180 Query: 182 EQTVKVHIRNLLRKLNVRSRVAATIL----FLQQR 212 TVKVH+++LL KL++ SRV A + ++ Sbjct: 181 VGTVKVHVKHLLHKLDLHSRVEAVVWHHEQAARRN 215 >UniRef50_B4D5C2 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C2_9BACT Length = 213 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 7/214 (3%) Query: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 M + +VM+VDDH + G+R L+ + V+AEA DG AI+ D+ L+DL Sbjct: 1 MKTSAKIRVMLVDDHFAILMGLRACLKPEGDIAVIAEAADGGEAIEQYRAHLPDITLMDL 60 Query: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 ++ + G+ + + R+ A+II LT D+ + AGA Y++K+ + +L AI Sbjct: 61 SLPRLDGVAAIRTICREFPEARIIALTTRQGDDDIHQALSAGARSYVMKNMPRQEMLRAI 120 Query: 121 RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI 180 RA G + + V L + E LT REL+V+ LA+G SNK+I L I Sbjct: 121 RAVHDGQEYLPQEVQTALLQHEKRAP-------LTPRELEVIRLLARGCSNKEIGMALGI 173 Query: 181 SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGA 214 +E T K+H+ +LL K+ V R A + L+ Sbjct: 174 AEITAKIHVSHLLSKMGVLDRSQAVMEALRHGII 207 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +V++VDDH L+R G+ ++L G +VV +A G ++ A L DV+L+D+ M G+ Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 GL+ + R +++ +TV + L+ AGA GY+ K + +++AIR Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 126 GSKVFSERVNQYL-REREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQT 184 G + S ++ Q L + PF +L+ERE+ + + + I+ L +S +T Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 185 VKVHIRNLLRKLNVRSRVAATILFLQQR 212 V + + KL++ S V +L ++ Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVRHG 208 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 6/213 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 V+I DDH L+R G++ +L+ G V+ A +G A+ L RL+ DV L+DL+M S Sbjct: 5 VTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIKS 64 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ + L +G + + LT +++ +DAGA GY+LK S + L+ AI +G Sbjct: 65 GVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 127 SKVFSERVNQYLREREMFGAEE---DPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 + ++ + + + D LTERE +VL ++ G N++IA +L IS + Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 184 TVKVHIRNLLRKLNVRSRVAATILF--LQQRGA 214 TV+ H N ++KL +RS+ L+++G Sbjct: 184 TVEKHRSNFMKKLGLRSKAELKAYSEELKKKGI 216 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 251 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 2/209 (0%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 +++I +D L+R+G+ LL +V EA DG AI++A L DV+L+DL+M + Sbjct: 3 VRILIAEDQQLVRQGLVALL-AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G++ +++ ++++LTV++ V + AGADGY LK L+ AI A G Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 +++ L + + G+ + LT RE +VL +A+G N++IA L I+ +TV+ Sbjct: 122 KTYLGPGLSEDLVKEYLEGS-DMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQRGAQ 215 H +++KL++ + +++ + Sbjct: 181 THRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 251 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 5/205 (2%) Query: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 ++IVDD PL+ + +R LL + EV A A DGA+AI + D++L+D+ M GM Sbjct: 1 MNILIVDDDPLVCQSLRLLLSREADMEVTATANDGAAAIQCCEEVLPDIVLMDIRMPGMD 60 Query: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 G+ +++ QI++LT + + AGA+GY+LK + + + +RA A G Sbjct: 61 GIQAARQIKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRALASG 120 Query: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 S V V + L E++ S LT RE D+L +A G SN++IA L ISE TV+ Sbjct: 121 SSVVDANVLKTLML-----PEKENRSDLTPRENDILELVALGCSNREIAEQLFISEGTVR 175 Query: 187 VHIRNLLRKLNVRSRVAATILFLQQ 211 + +L KL +R R I + +Q Sbjct: 176 NTLSIILDKLELRDRTQLAIYYWRQ 200 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 5/207 (2%) Query: 6 PFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65 +++I +DH + G++ E + E V A +G I+L R ++I+ D+ M M Sbjct: 1 MIRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMPVM 60 Query: 66 SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 G+ + + +II ++ D V +++AGA GY+LK+S + LL AIR + Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185 G + + +VLT R+ ++L + QG +N++IA L I + TV Sbjct: 121 GEHYYDPNITVK-----QKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTV 175 Query: 186 KVHIRNLLRKLNVRSRVAATILFLQQR 212 + H +N++RKL ++ L+++ Sbjct: 176 ETHRKNMIRKLGLQGAGELLRYALEKK 202 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.216 0.776 Lambda K H 0.267 0.0666 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,382,191,557 Number of Sequences: 3077464 Number of extensions: 187183955 Number of successful extensions: 585402 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 40011 Number of HSP's successfully gapped in prelim test: 14102 Number of HSP's that attempted gapping in prelim test: 480881 Number of HSP's gapped (non-prelim): 63295 length of query: 215 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 92 effective length of database: 661,868,284 effective search space: 60891882128 effective search space used: 60891882128 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 92 (39.3 bits)