Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	A	L	L	P	D	K	E	K	L	L	R	N	F	L	R	C	A	N	W	E	E	K	Y	L	Y	I	I	E	L	G	Q	R	L	P	E	L	R	D	E	D	R	S	P	Q	N	S	I	Q	G	C	Q	S	Q	V	W	I	V	M	R
Secondary structure
SS confidence
Disorder		?	?	?	?												?		?	?																			?					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		Q	N	A	Q	G	I	I	E	L	Q	G	D	S	D	A	A	I	V	K	G	L	I	A	V	V	F	I	L	Y	D	Q	M	T	P	Q	D	I	V	N	F	D	V	R	P	W	F	E	K	M	A	L	T	Q	H	L	T	P	S	R	S
Secondary structure
SS confidence
Disorder																																																				?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Sequence		Q	G	L	E	A	M	I	R	A	I	R	A	K	A	A	A	L	S
Secondary structure
SS confidence
Disorder																		?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1mzg chain A Region: 3 - 138 Aligned: 136 Modelled: 136 Confidence: 100.0% Identity: 97% Fold: SufE/NifU Superfamily: SufE/NifU Family: SufE-like Phyre2 PDB 1ni7 chain A Region: 6 - 137 Aligned: 132 Modelled: 132 Confidence: 100.0% Identity: 33% Fold: SufE/NifU Superfamily: SufE/NifU Family: SufE-like Phyre2 PDB 1wlo chain A Region: 3 - 137 Aligned: 131 Modelled: 135 Confidence: 100.0% Identity: 16% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sufe protein; PDBTitle: solution structure of the hypothetical protein from thermus2 thermophilus hb8 Phyre2 PDB 1r9p chain A Region: 49 - 136 Aligned: 83 Modelled: 88 Confidence: 96.2% Identity: 13% Fold: SufE/NifU Superfamily: SufE/NifU Family: NifU/IscU domain Phyre2 PDB 1wfz chain A Region: 49 - 137 Aligned: 84 Modelled: 89 Confidence: 94.3% Identity: 12% Fold: SufE/NifU Superfamily: SufE/NifU Family: NifU/IscU domain Phyre2 PDB 2z7e chain B Region: 49 - 137 Aligned: 85 Modelled: 89 Confidence: 90.5% Identity: 11% PDB header:biosynthetic protein Chain: B: PDB Molecule:nifu-like protein; PDBTitle: crystal structure of aquifex aeolicus iscu with bound [2fe-2 2s] cluster Phyre2 PDB 1xjs chain A Region: 1 - 109 Aligned: 94 Modelled: 109 Confidence: 78.7% Identity: 14% Fold: SufE/NifU Superfamily: SufE/NifU Family: NifU/IscU domain Phyre2 PDB 1s2n chain B Region: 75 - 99 Aligned: 25 Modelled: 25 Confidence: 55.1% Identity: 20% PDB header:hydrolase Chain: B: PDB Molecule:extracellular subtilisin-like serine proteinase; PDBTitle: crystal strucure of a cold adapted subtilisin-like serine proteinase Phyre2 PDB 1gci chain A Region: 57 - 99 Aligned: 43 Modelled: 0 Confidence: 54.8% Identity: 21% Fold: Subtilisin-like Superfamily: Subtilisin-like Family: Subtilases Phyre2 PDB 2b6n chain A Region: 75 - 99 Aligned: 25 Modelled: 25 Confidence: 53.4% Identity: 20% PDB header:hydrolase Chain: A: PDB Molecule:proteinase k; PDBTitle: the 1.8 a crystal structure of a proteinase k like enzyme from a2 psychrotroph serratia species Phyre2 PDB 1r0r chain E Region: 56 - 99 Aligned: 44 Modelled: 44 Confidence: 53.1% Identity: 16% Fold: Subtilisin-like Superfamily: Subtilisin-like Family: Subtilases Phyre2 PDB 2iy9 chain A Region: 57 - 99 Aligned: 43 Modelled: 43 Confidence: 51.7% Identity: 21% PDB header:toxin Chain: A: PDB Molecule:suba; PDBTitle: crystal structure of the a-subunit of the ab5 toxin from e.2 coli Phyre2 PDB 2w2q chain A Region: 75 - 99 Aligned: 25 Modelled: 25 Confidence: 49.8% Identity: 24% PDB header:hydrolase/receptor Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: pcsk9-deltac d374h mutant bound to wt egf-a of ldlr Phyre2 PDB 1su0 chain B Region: 49 - 109 Aligned: 59 Modelled: 61 Confidence: 49.6% Identity: 8% Fold: SufE/NifU Superfamily: SufE/NifU Family: NifU/IscU domain Phyre2 PDB 1pda chain A domain 2 Region: 50 - 71 Aligned: 21 Modelled: 22 Confidence: 45.7% Identity: 29% Fold: dsRBD-like Superfamily: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Family: Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Phyre2 PDB 3f7o chain B Region: 57 - 99 Aligned: 43 Modelled: 43 Confidence: 45.6% Identity: 21% PDB header:hydrolase Chain: B: PDB Molecule:serine protease; PDBTitle: crystal structure of cuticle-degrading protease from paecilomyces2 lilacinus (pl646) Phyre2 PDB 2oxa chain A Region: 75 - 99 Aligned: 25 Modelled: 25 Confidence: 45.2% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:extracellular serine protease; PDBTitle: crystal structure of serine protease of aeromonas sobria Phyre2 PDB 2qq4 chain A Region: 21 - 132 Aligned: 111 Modelled: 112 Confidence: 45.0% Identity: 15% PDB header:metal binding protein Chain: A: PDB Molecule:iron-sulfur cluster biosynthesis protein iscu; PDBTitle: crystal structure of iron-sulfur cluster biosynthesis2 protein iscu (ttha1736) from thermus thermophilus hb8 Phyre2 PDB 1p8j chain A domain 2 Region: 75 - 99 Aligned: 25 Modelled: 25 Confidence: 43.9% Identity: 24% Fold: Subtilisin-like Superfamily: Subtilisin-like Family: Subtilases Phyre2 PDB 2ixt chain A domain 1 Region: 57 - 99 Aligned: 43 Modelled: 43 Confidence: 42.4% Identity: 16% Fold: Subtilisin-like Superfamily: Subtilisin-like Family: Subtilases Phyre2 1 d1mzga_ 2 d1ni7a_ 3 c1wloA_ 4 d1r9pa_ 5 d1wfza_ 6 c2z7eB_ 7 d1xjsa_ 8 c1s2nB_ 9 d1gcia_ 10 c2b6nA_ 11 d1r0re_ 12 c2iy9A_ 13 c2w2qA_ 14 d1su0b_ 15 d1pdaa2 16 c3f7oB_ 17 c2oxaA_ 18 c2qq4A_ 19 d1p8ja2 20 d2ixta1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1mzga_ 100.0 97 Fold:SufE/NifU Superfamily:SufE/NifU Family:SufE-like 2 d1ni7a_ 100.0 33 Fold:SufE/NifU Superfamily:SufE/NifU Family:SufE-like 3 c1wloA_ 100.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sufe protein; PDBTitle: solution structure of the hypothetical protein from thermus2 thermophilus hb8 4 d1r9pa_ 96.2 13 Fold:SufE/NifU Superfamily:SufE/NifU Family:NifU/IscU domain 5 d1wfza_ 94.3 12 Fold:SufE/NifU Superfamily:SufE/NifU Family:NifU/IscU domain 6 c2z7eB_ 90.5 11 PDB header:biosynthetic protein Chain: B: PDB Molecule:nifu-like protein; PDBTitle: crystal structure of aquifex aeolicus iscu with bound [2fe-2 2s] cluster 7 d1xjsa_ 78.7 14 Fold:SufE/NifU Superfamily:SufE/NifU Family:NifU/IscU domain 8 c1s2nB_ 55.1 20 PDB header:hydrolase Chain: B: PDB Molecule:extracellular subtilisin-like serine proteinase; PDBTitle: crystal strucure of a cold adapted subtilisin-like serine proteinase 9 d1gcia_ 54.8 21 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 10 c2b6nA_ 53.4 20 PDB header:hydrolase Chain: A: PDB Molecule:proteinase k; PDBTitle: the 1.8 a crystal structure of a proteinase k like enzyme from a2 psychrotroph serratia species 11 d1r0re_ 53.1 16 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 12 c2iy9A_ 51.7 21 PDB header:toxin Chain: A: PDB Molecule:suba; PDBTitle: crystal structure of the a-subunit of the ab5 toxin from e.2 coli 13 c2w2qA_ 49.8 24 PDB header:hydrolase/receptor Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: pcsk9-deltac d374h mutant bound to wt egf-a of ldlr 14 d1su0b_ 49.6 8 Fold:SufE/NifU Superfamily:SufE/NifU Family:NifU/IscU domain 15 d1pdaa2 45.7 29 Fold:dsRBD-like Superfamily:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Family:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 16 c3f7oB_ 45.6 21 PDB header:hydrolase Chain: B: PDB Molecule:serine protease; PDBTitle: crystal structure of cuticle-degrading protease from paecilomyces2 lilacinus (pl646) 17 c2oxaA_ 45.2 16 PDB header:hydrolase Chain: A: PDB Molecule:extracellular serine protease; PDBTitle: crystal structure of serine protease of aeromonas sobria 18 c2qq4A_ 45.0 15 PDB header:metal binding protein Chain: A: PDB Molecule:iron-sulfur cluster biosynthesis protein iscu; PDBTitle: crystal structure of iron-sulfur cluster biosynthesis2 protein iscu (ttha1736) from thermus thermophilus hb8 19 d1p8ja2 43.9 24 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 20 d2ixta1 42.4 16 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 21 d1gtka2 not modelled 41.6 29 Fold:dsRBD-like Superfamily:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain Family:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 22 d1to2e_ not modelled 40.4 16 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 23 d2id4a2 not modelled 36.8 16 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 24 d1v6ca_ not modelled 36.8 12 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 25 c1r64A_ not modelled 33.9 16 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:kexin; PDBTitle: the 2.2 a crystal structure of kex2 protease in complex with ac-arg-2 glu-lys-boroarg peptidyl boronic acid inhibitor 26 c1p8jB_ not modelled 32.1 24 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:furin precursor; PDBTitle: crystal structure of the proprotein convertase furin 27 d1gnsa_ not modelled 30.5 14 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 28 d1bh6a_ not modelled 29.7 20 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 29 d1nexa1 not modelled 29.0 17 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 30 c3qfhE_ not modelled 26.5 22 PDB header:hydrolase Chain: E: PDB Molecule:epidermin leader peptide processing serine protease epip; PDBTitle: 2.05 angstrom resolution crystal structure of epidermin leader peptide2 processing serine protease (epip) from staphylococcus aureus. 31 d1fs1b1 not modelled 24.7 30 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 32 c3bpsA_ not modelled 23.9 24 PDB header:hydrolase/lipid transport Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: pcsk9:egf-a complex 33 d1fs2b1 not modelled 23.3 30 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 34 c3lpcA_ not modelled 22.1 24 PDB header:hydrolase Chain: A: PDB Molecule:aprb2; PDBTitle: crystal structure of a subtilisin-like protease 35 c3n00A_ not modelled 22.0 17 PDB header:transcription regulator Chain: A: PDB Molecule:rev-erba-alpha; PDBTitle: crystal structure of a deletion mutant of human reverba ligand binding2 domain bound with an ncor id1 peptide determined to 2.60a 36 c2ypnA_ not modelled 20.0 29 PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase 37 d2olra2 not modelled 19.1 16 Fold:PEP carboxykinase N-terminal domain Superfamily:PEP carboxykinase N-terminal domain Family:PEP carboxykinase N-terminal domain 38 d1tlha_ not modelled 18.9 29 Fold:Anti-sigma factor AsiA Superfamily:Anti-sigma factor AsiA Family:Anti-sigma factor AsiA 39 d1ii2a2 not modelled 17.9 22 Fold:PEP carboxykinase N-terminal domain Superfamily:PEP carboxykinase N-terminal domain Family:PEP carboxykinase N-terminal domain 40 c2yukA_ not modelled 17.5 14 PDB header:transferase Chain: A: PDB Molecule:myeloid/lymphoid or mixed-lineage leukemia PDBTitle: solution structure of the hmg box of human myeloid/lymphoid2 or mixed-lineage leukemia protein 3 homolog 41 d2pwaa1 not modelled 16.8 19 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 42 d2ovra1 not modelled 16.4 30 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 43 c2gjvF_ not modelled 15.9 15 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative cytoplasmic protein; PDBTitle: crystal structure of a protein of unknown function from salmonella2 typhimurium 44 d2gjva1 not modelled 15.6 15 Fold:Phage tail protein-like Superfamily:Phage tail protein-like Family:STM4215-like 45 d1meea_ not modelled 13.5 16 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 46 d1r6va_ not modelled 13.4 28 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 47 d2hh6a1 not modelled 12.8 16 Fold:Left-handed superhelix Superfamily:BH3980-like Family:BH3980-like 48 c2w0gA_ not modelled 12.0 20 PDB header:chaperone Chain: A: PDB Molecule:hsp90 co-chaperone cdc37; PDBTitle: hsp90 co-chaperone cdc37 49 c1us7B_ not modelled 10.4 20 PDB header:chaperone Chain: B: PDB Molecule:hsp90 co-chaperone cdc37; PDBTitle: complex of hsp90 and p50 50 d1us7b_ not modelled 10.4 20 Fold:Hsp90 co-chaperone CDC37 Superfamily:Hsp90 co-chaperone CDC37 Family:Hsp90 co-chaperone CDC37 51 c3gq2B_ not modelled 10.3 11 PDB header:transport protein Chain: B: PDB Molecule:general vesicular transport factor p115; PDBTitle: crystal structure of the dimer of the p115 tether globular head domain 52 c3lysC_ not modelled 10.0 9 PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f 53 d1gm5a1 not modelled 9.4 18 Fold:Four-helical up-and-down bundle Superfamily:RecG, N-terminal domain Family:RecG, N-terminal domain 54 d1n83a_ not modelled 9.1 15 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 55 c2hl7A_ not modelled 9.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccmh; PDBTitle: crystal structure of the periplasmic domain of ccmh from pseudomonas2 aeruginosa 56 d1osha_ not modelled 9.0 30 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 57 c3t41B_ not modelled 8.2 21 PDB header:hydrolase Chain: B: PDB Molecule:epidermin leader peptide processing serine protease epip; PDBTitle: 1.95 angstrom resolution crystal structure of epidermin leader peptide2 processing serine protease (epip) s393a mutant from staphylococcus3 aureus 58 c2w3cA_ not modelled 8.0 11 PDB header:transport protein Chain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115 59 d1vdda_ not modelled 7.7 26 Fold:Recombination protein RecR Superfamily:Recombination protein RecR Family:Recombination protein RecR 60 c2kvhA_ not modelled 7.1 39 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32; PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein 61 c3e21A_ not modelled 7.0 32 PDB header:apoptosis Chain: A: PDB Molecule:fas-associated factor 1; PDBTitle: crystal structure of faf-1 uba domain 62 c3eq1A_ not modelled 6.9 26 PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution 63 d1pq9a_ not modelled 6.9 12 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 64 c2kykA_ not modelled 6.8 25 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog; PDBTitle: the sandwich region between two lmp2a py motif regulates the2 interaction between aip4ww2domain and py motif 65 c2hc4A_ not modelled 6.7 15 PDB header:gene regulation Chain: A: PDB Molecule:vitamin d receptor; PDBTitle: crystal structure of the lbd of vdr of danio rerio in2 complex with calcitriol 66 d1t7ra_ not modelled 6.7 15 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 67 c3i74B_ not modelled 6.4 20 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:subtilisin-like protease; PDBTitle: crystal structure of the plant subtilisin-like protease sbt3 in2 complex with a chloromethylketone inhibitor 68 c3dmbA_ not modelled 6.4 18 PDB header:oxidoreductase Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution 69 c3c18B_ not modelled 6.4 10 PDB header:transferase Chain: B: PDB Molecule:nucleotidyltransferase-like protein; PDBTitle: crystal structure of nucleotidyltransferase-like protein2 (zp_00538802.1) from exiguobacterium sibiricum 255-15 at 1.90 a3 resolution 70 d1fpoa1 not modelled 6.3 8 Fold:Long alpha-hairpin Superfamily:Chaperone J-domain Family:Chaperone J-domain 71 d1x40a1 not modelled 6.2 22 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 72 c2dl0A_ not modelled 6.2 17 PDB header:signaling protein Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1 73 d1coka_ not modelled 6.1 15 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 74 d1dbia_ not modelled 5.9 21 Fold:Subtilisin-like Superfamily:Subtilisin-like Family:Subtilases 75 c2kg5A_ not modelled 5.6 28 PDB header:signaling protein Chain: A: PDB Molecule:arf-gap, rho-gap domain, ank repeat and ph PDBTitle: nmr solution structure of arap3-sam 76 c3zqpB_ not modelled 5.6 13 PDB header:dna-binding protein Chain: B: PDB Molecule:terminase small subunit; PDBTitle: crystal structure of the small terminase oligomerization2 domain from a spp1-like bacteriophage 77 c1z5xE_ not modelled 5.5 21 PDB header:hormone/growth factor receptor Chain: E: PDB Molecule:ecdysone receptor ligand binding domain; PDBTitle: hemipteran ecdysone receptor ligand-binding domain2 complexed with ponasterone a 78 c2eamA_ not modelled 5.5 18 PDB header:signaling protein Chain: A: PDB Molecule:putative 47 kda protein; PDBTitle: solution structure of the n-terminal sam-domain of a human2 putative 47 kda protein 79 c3lbdA_ not modelled 5.4 18 PDB header:nuclear receptor Chain: A: PDB Molecule:retinoic acid receptor gamma; PDBTitle: ligand-binding domain of the human retinoic acid receptor2 gamma bound to 9-cis retinoic acid 80 c2ocfA_ not modelled 5.2 11 PDB header:hormone/growth factor Chain: A: PDB Molecule:estrogen receptor; PDBTitle: human estrogen receptor alpha ligand-binding domain in complex with2 estradiol and the e2#23 fn3 monobody 81 c2kw0A_ not modelled 5.1 27 PDB header:oxidoreductase Chain: A: PDB Molecule:ccmh protein; PDBTitle: solution structure of n-terminal domain of ccmh from escherichia.coli

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0