Phyre 2 alignment of P0A836 with d1b04a_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A836
Confidence | 29.46% | Date | Thu Jan 5 11:06:47 GMT 2012
Rank | 263 | Aligned Residues | 35
% Identity | 17% | Template | d1b04a_
SCOP info | ATP-grasp | DNA ligase/mRNA capping enzyme, catalytic domain | Adenylation domain of NAD+-dependent DNA ligase
Resolution | 2.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . |  | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | E | Y | Q | A | K | Q | L | F | A | R | Y | G | L | P | A | . | P | V | G | Y | A | C | T | T | P | R | E | A | E | E | A | A | S | K | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | H | S | E | A | L | D | Y | L | Q | A | L | G | F | K | V | N | P | E | R | R | R | C | A | N | I | D | E | V | I | A | F | V | S | E | W
Template Known Secondary structure |  | B |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions