Phyre 2 Results for P37330

Phyre Home | Retrieve Phyre Job Id

Email | l.a.kelley@imperial.ac.uk
Description | P37330
Date | Thu Jan 5 11:55:16 GMT 2012
Unique Job ID | 70cc66561210888c

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d1d8ca_
Top template information
Fold:TIM beta/alpha-barrel Superfamily:Malate synthase G Family:Malate synthase G
Confidence and coverage
Confidence: | 100.0% | Coverage: | 98%
709 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | S | Q | T | I | T | Q | S | R | L | R | I | D | A | N | F | K | R | F | V | D | E | E | V | L | P | G | T | G | L | D | A | A | A | F | W | R | N | F | D | E | I | V | H | D | L | A | P | E | N | R | Q | L | L | A | E | R | D | R | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | Q | A | A | L | D | E | W | H | R | S | N | P | G | P | V | K | D | K | A | A | Y | K | S | F | L | R | E | L | G | Y | L | V | P | Q | P | E | R | V | T | V | E | T | T | G | I | D | S | E | I | T | S | Q | A | G | P | Q | L | V | V | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? |  | ? | ? |  | ? |  | ? |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | A | M | N | A | R | Y | A | L | N | A | A | N | A | R | W | G | S | L | Y | D | A | L | Y | G | S | D | I | I | P | Q | E | G | A | M | V | S | G | Y | D | P | Q | R | G | E | Q | V | I | A | W | V | R | R | F | L | D | E | S | L | P | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | E | N | G | S | Y | Q | D | V | V | A | F | K | V | V | D | K | Q | L | R | I | Q | L | K | N | G | K | E | T | T | L | R | T | P | A | Q | F | V | G | Y | R | G | D | A | A | A | P | T | C | I | L | L | K | N | N | G | L | H | I | E | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | Q | I | D | A | N | G | R | I | G | K | D | D | P | A | H | I | N | D | V | I | V | E | A | A | I | S | T | I | L | D | C | E | D | S | V | A | A | V | D | A | E | D | K | I | L | L | Y | R | N | L | L | G | L | M | Q | G | T | L | Q | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  | ? | ? | ? | ? | ? |  | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  | ? | ? | ? |  | ? |  |  |  |  | ? |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | K | M | E | K | N | G | R | Q | I | V | R | K | L | N | D | D | R | H | Y | T | A | A | D | G | S | E | I | S | L | H | G | R | S | L | L | F | I | R | N | V | G | H | L | M | T | I | P | V | I | W | D | S | E | G | N | E | I | P | E | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? |  |  | ? | ? | ? |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | I | L | D | G | V | M | T | G | A | I | A | L | Y | D | L | K | V | Q | K | N | S | R | T | G | S | V | Y | I | V | K | P | K | M | H | G | P | Q | E | V | A | F | A | N | K | L | F | T | R | I | E | T | M | L | G | M | A | P | N | T | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | K | M | G | I | M | D | E | E | R | R | T | S | L | N | L | R | S | C | I | A | Q | A | R | N | R | V | A | F | I | N | T | G | F | L | D | R | T | G | D | E | M | H | S | V | M | E | A | G | P | M | L | R | K | N | Q | M | K | S | T | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | W | I | K | A | Y | E | R | N | N | V | L | S | G | L | F | C | G | L | R | G | K | A | Q | I | G | K | G | M | W | A | M | P | D | L | M | A | D | M | Y | S | Q | K | G | D | Q | L | R | A | G | A | N | T | A | W | V | P | S | P | T | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Sequence |  | A | T | L | H | A | L | H | Y | H | Q | T | N | V | Q | S | V | Q | A | N | I | A | Q | T | E | F | N | A | E | F | E | P | L | L | D | D | L | L | T | I | P | V | A | E | N | A | N | W | S | A | Q | E | I | Q | Q | E | L | D | N | N | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  | ? |  | ? | ? | ? | ? |  | ? |  |  |  |  |  |  |  |  | ? |  | ? |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660
Sequence |  | Q | G | I | L | G | Y | V | V | R | W | V | E | Q | G | I | G | C | S | K | V | P | D | I | H | N | V | A | L | M | E | D | R | A | T | L | R | I | S | S | Q | H | I | A | N | W | L | R | H | G | I | L | T | K | E | Q | V | Q | A | S | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  | ? |  | ? | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720
Sequence |  | E | N | M | A | K | V | V | D | Q | Q | N | A | G | D | P | A | Y | R | P | M | A | G | N | F | A | N | S | C | A | F | K | A | A | S | D | L | I | F | L | G | V | K | Q | P | N | G | Y | T | E | P | L | L | H | A | W | R | L | R | E | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | .
Sequence |  | E | S | H
Secondary structure |  |  |  |
SS confidence |  |  |  |
Disorder |  | ? | ? | ?
Disorder confidence |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d1d8ca_ |

### PDB 1d8c chain A

Region: 3 - 722
Aligned: 709
Modelled: 720
Confidence: 100.0%
Identity: 97%
Fold: TIM beta/alpha-barrel
Superfamily: Malate synthase G
Family: Malate synthase G

Phyre2
2 |
| d1n8ia_ |

### PDB 1n8i chain A

Region: 2 - 721
Aligned: 694
Modelled: 720
Confidence: 100.0%
Identity: 60%
Fold: TIM beta/alpha-barrel
Superfamily: Malate synthase G
Family: Malate synthase G

Phyre2
3 |
| c3cuzA_ |

### PDB 3cuz chain A

Region: 268 - 707
Aligned: 395
Modelled: 419
Confidence: 100.0%
Identity: 21%
PDB header:transferase
Chain: A: PDB Molecule:malate synthase a;
PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design

Phyre2
4 |
| c3cuxA_ |

### PDB 3cux chain A

Region: 268 - 707
Aligned: 382
Modelled: 420
Confidence: 100.0%
Identity: 21%
PDB header:transferase
Chain: A: PDB Molecule:malate synthase;
PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design

Phyre2
5 |
| c3pugA_ |

### PDB 3pug chain A

Region: 268 - 680
Aligned: 280
Modelled: 299
Confidence: 99.8%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:malate synthase;
PDBTitle: haloferax volcanii malate synthase native at 3mm glyoxylate

Phyre2
6 |
| c3r4iB_ |

### PDB 3r4i chain B

Region: 257 - 642
Aligned: 270
Modelled: 290
Confidence: 99.7%
Identity: 16%
PDB header:lyase
Chain: B: PDB Molecule:citrate lyase;
PDBTitle: crystal structure of a citrate lyase (bxe_b2899) from burkholderia2 xenovorans lb400 at 2.24 a resolution

Phyre2
7 |
| c1sgjB_ |

### PDB 1sgj chain B

Region: 387 - 548
Aligned: 138
Modelled: 162
Confidence: 99.6%
Identity: 17%
PDB header:lyase
Chain: B: PDB Molecule:citrate lyase, beta subunit;
PDBTitle: crystal structure of citrate lyase beta subunit

Phyre2
8 |
| c3qqwC_ |

### PDB 3qqw chain C

Region: 257 - 548
Aligned: 226
Modelled: 241
Confidence: 99.6%
Identity: 13%
PDB header:lyase
Chain: C: PDB Molecule:putative citrate lyase;
PDBTitle: crystal structure of a hypothetical lyase (reut_b4148) from ralstonia2 eutropha jmp134 at 2.44 a resolution

Phyre2
9 |
| d1sgja_ |

### PDB 1sgj chain A

Region: 387 - 548
Aligned: 138
Modelled: 162
Confidence: 99.6%
Identity: 17%
Fold: TIM beta/alpha-barrel
Superfamily: Phosphoenolpyruvate/pyruvate domain
Family: HpcH/HpaI aldolase

Phyre2
10 |
| c1u5vA_ |

### PDB 1u5v chain A

Region: 268 - 548
Aligned: 190
Modelled: 216
Confidence: 99.6%
Identity: 21%
PDB header:lyase
Chain: A: PDB Molecule:cite;
PDBTitle: structure of cite complexed with triphosphate group of atp2 form mycobacterium tuberculosis

Phyre2
11 |
| d1u5ha_ |

### PDB 1u5h chain A

Region: 268 - 548
Aligned: 190
Modelled: 216
Confidence: 99.6%
Identity: 19%
Fold: TIM beta/alpha-barrel
Superfamily: Phosphoenolpyruvate/pyruvate domain
Family: HpcH/HpaI aldolase

Phyre2
12 |
| c2hroA_ |

### PDB 2hro chain A

Region: 370 - 501
Aligned: 124
Modelled: 132
Confidence: 97.0%
Identity: 23%
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: structure of the full-lenght enzyme i of the pts system from2 staphylococcus carnosus

Phyre2
13 |
| c2bg5C_ |

### PDB 2bg5 chain C

Region: 370 - 501
Aligned: 124
Modelled: 132
Confidence: 96.8%
Identity: 20%
PDB header:transferase
Chain: C: PDB Molecule:phosphoenolpyruvate-protein kinase;
PDBTitle: crystal structure of the phosphoenolpyruvate-binding enzyme2 i-domain from the thermoanaerobacter tengcongensis pep:3 sugar phosphotransferase system (pts)

Phyre2
14 |
| d1dxea_ |

### PDB 1dxe chain A

Region: 388 - 521
Aligned: 116
Modelled: 134
Confidence: 96.8%
Identity: 14%
Fold: TIM beta/alpha-barrel
Superfamily: Phosphoenolpyruvate/pyruvate domain
Family: HpcH/HpaI aldolase

Phyre2
15 |
| c2hwgA_ |

### PDB 2hwg chain A

Region: 370 - 501
Aligned: 124
Modelled: 132
Confidence: 96.5%
Identity: 17%
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase;
PDBTitle: structure of phosphorylated enzyme i of the2 phosphoenolpyruvate:sugar phosphotransferase system

Phyre2
16 |
| c2v5jB_ |

### PDB 2v5j chain B

Region: 388 - 521
Aligned: 116
Modelled: 134
Confidence: 96.0%
Identity: 22%
PDB header:lyase
Chain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase;
PDBTitle: apo class ii aldolase hpch

Phyre2
17 |
| c3qz6A_ |

### PDB 3qz6 chain A

Region: 384 - 521
Aligned: 121
Modelled: 138
Confidence: 96.0%
Identity: 13%
PDB header:lyase
Chain: A: PDB Molecule:hpch/hpai aldolase;
PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2

Phyre2
18 |
| c2vwtA_ |

### PDB 2vwt chain A

Region: 384 - 521
Aligned: 118
Modelled: 122
Confidence: 95.9%
Identity: 17%
PDB header:lyase
Chain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase;
PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex

Phyre2
19 |
| c2olsA_ |

### PDB 2ols chain A

Region: 375 - 501
Aligned: 109
Modelled: 111
Confidence: 93.4%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:phosphoenolpyruvate synthase;
PDBTitle: the crystal structure of the phosphoenolpyruvate synthase from2 neisseria meningitidis

Phyre2
20 |
| c1izcA_ |

### PDB 1izc chain A

Region: 384 - 521
Aligned: 125
Modelled: 138
Confidence: 93.1%
Identity: 18%
PDB header:lyase
Chain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase;
PDBTitle: crystal structure analysis of macrophomate synthase

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1d8ca_ |
|  | 100.0 | 97 | Fold:TIM beta/alpha-barrel Superfamily:Malate synthase G Family:Malate synthase G
2 | d1n8ia_ |
|  | 100.0 | 60 | Fold:TIM beta/alpha-barrel Superfamily:Malate synthase G Family:Malate synthase G
3 | c3cuzA_ |
|  | 100.0 | 21 | PDB header:transferase Chain: A: PDB Molecule:malate synthase a; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design
4 | c3cuxA_ |
|  | 100.0 | 21 | PDB header:transferase Chain: A: PDB Molecule:malate synthase; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design
5 | c3pugA_ |
|  | 99.8 | 17 | PDB header:transferase Chain: A: PDB Molecule:malate synthase; PDBTitle: haloferax volcanii malate synthase native at 3mm glyoxylate
6 | c3r4iB_ |
|  | 99.7 | 16 | PDB header:lyase Chain: B: PDB Molecule:citrate lyase; PDBTitle: crystal structure of a citrate lyase (bxe_b2899) from burkholderia2 xenovorans lb400 at 2.24 a resolution
7 | c1sgjB_ |
|  | 99.6 | 17 | PDB header:lyase Chain: B: PDB Molecule:citrate lyase, beta subunit; PDBTitle: crystal structure of citrate lyase beta subunit
8 | c3qqwC_ |
|  | 99.6 | 13 | PDB header:lyase Chain: C: PDB Molecule:putative citrate lyase; PDBTitle: crystal structure of a hypothetical lyase (reut_b4148) from ralstonia2 eutropha jmp134 at 2.44 a resolution
9 | d1sgja_ |
|  | 99.6 | 17 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:HpcH/HpaI aldolase
10 | c1u5vA_ |
|  | 99.6 | 21 | PDB header:lyase Chain: A: PDB Molecule:cite; PDBTitle: structure of cite complexed with triphosphate group of atp2 form mycobacterium tuberculosis
11 | d1u5ha_ |
|  | 99.6 | 19 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:HpcH/HpaI aldolase
12 | c2hroA_ |
|  | 97.0 | 23 | PDB header:transferase Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase; PDBTitle: structure of the full-lenght enzyme i of the pts system from2 staphylococcus carnosus
13 | c2bg5C_ |
|  | 96.8 | 20 | PDB header:transferase Chain: C: PDB Molecule:phosphoenolpyruvate-protein kinase; PDBTitle: crystal structure of the phosphoenolpyruvate-binding enzyme2 i-domain from the thermoanaerobacter tengcongensis pep:3 sugar phosphotransferase system (pts)
14 | d1dxea_ |
|  | 96.8 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:HpcH/HpaI aldolase
15 | c2hwgA_ |
|  | 96.5 | 17 | PDB header:transferase Chain: A: PDB Molecule:phosphoenolpyruvate-protein phosphotransferase; PDBTitle: structure of phosphorylated enzyme i of the2 phosphoenolpyruvate:sugar phosphotransferase system
16 | c2v5jB_ |
|  | 96.0 | 22 | PDB header:lyase Chain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PDBTitle: apo class ii aldolase hpch
17 | c3qz6A_ |
|  | 96.0 | 13 | PDB header:lyase Chain: A: PDB Molecule:hpch/hpai aldolase; PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2
18 | c2vwtA_ |
|  | 95.9 | 17 | PDB header:lyase Chain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex
19 | c2olsA_ |
|  | 93.4 | 18 | PDB header:transferase Chain: A: PDB Molecule:phosphoenolpyruvate synthase; PDBTitle: the crystal structure of the phosphoenolpyruvate synthase from2 neisseria meningitidis
20 | c1izcA_ |
|  | 93.1 | 18 | PDB header:lyase Chain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase; PDBTitle: crystal structure analysis of macrophomate synthase
21 | d1izca_ |
| not modelled | 93.1 | 18 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:HpcH/HpaI aldolase
22 | d1e0ta2 |
| not modelled | 93.0 | 11 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate kinase
23 | d1vbga1 |
| not modelled | 92.8 | 21 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate phosphate dikinase, C-terminal domain
24 | c1h6zA_ |
| not modelled | 88.9 | 14 | PDB header:transferase Chain: A: PDB Molecule:pyruvate phosphate dikinase; PDBTitle: 3.0 a resolution crystal structure of glycosomal pyruvate2 phosphate dikinase from trypanosoma brucei
25 | d1kbla1 |
| not modelled | 88.8 | 15 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate phosphate dikinase, C-terminal domain
26 | d1pkla2 |
| not modelled | 88.2 | 17 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate kinase
27 | d1h6za1 |
| not modelled | 86.5 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate phosphate dikinase, C-terminal domain
28 | c1vbhA_ |
| not modelled | 85.7 | 19 | PDB header:transferase Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize
29 | d1a3xa2 |
| not modelled | 81.8 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate kinase
30 | c1kblA_ |
| not modelled | 74.0 | 13 | PDB header:transferase Chain: A: PDB Molecule:pyruvate phosphate dikinase; PDBTitle: pyruvate phosphate dikinase
31 | d1liua2 |
| not modelled | 62.5 | 15 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate kinase
32 | d2g50a2 |
| not modelled | 59.8 | 10 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate kinase
33 | c2kz6A_ |
| not modelled | 59.1 | 33 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2
34 | d1njra_ |
| not modelled | 48.1 | 17 | Fold:Macro domain-like Superfamily:Macro domain-like Family:Macro domain
35 | c2zzxD_ |
| not modelled | 45.9 | 12 | PDB header:transport protein Chain: D: PDB Molecule:abc transporter, solute-binding protein; PDBTitle: crystal structure of a periplasmic substrate binding protein in2 complex with lactate
36 | d1zela1 |
| not modelled | 43.8 | 32 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Rv2827c N-terminal domain-like
37 | c2q4oA_ |
| not modelled | 39.1 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein at2g37210/t2n18.3; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at2g37210
38 | d2q4oa1 |
| not modelled | 39.1 | 17 | Fold:MCP/YpsA-like Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like
39 | d1rg6a_ |
| not modelled | 37.5 | 30 | Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain
40 | c1zelA_ |
| not modelled | 36.7 | 29 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein rv2827c; PDBTitle: crystal structure of rv2827c protein from mycobacterium tuberculosis
41 | d1ic8a2 |
| not modelled | 35.1 | 27 | Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:POU-specific domain
42 | c2gbbA_ |
| not modelled | 31.2 | 17 | PDB header:isomerase Chain: A: PDB Molecule:putative chorismate mutase; PDBTitle: crystal structure of secreted chorismate mutase from2 yersinia pestis
43 | c1zr5B_ |
| not modelled | 29.7 | 24 | PDB header:gene regulation Chain: B: PDB Molecule:h2afy protein; PDBTitle: crystal structure of the macro-domain of human core histone variant2 macroh2a1.2
44 | c3q3jA_ |
| not modelled | 28.2 | 23 | PDB header:membrane protein/protein binding Chain: A: PDB Molecule:plexin-a2; PDBTitle: crystal structure of plexin a2 rbd in complex with rnd1
45 | d1s9va2 |
| not modelled | 26.4 | 22 | Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain
46 | d1t35a_ |
| not modelled | 25.1 | 10 | Fold:MCP/YpsA-like Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like
47 | c3q71A_ |
| not modelled | 23.6 | 28 | PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 14; PDBTitle: human parp14 (artd8) - macro domain 2 in complex with adenosine-5-2 diphosphoribose
48 | d1ydha_ |
| not modelled | 23.5 | 12 | Fold:MCP/YpsA-like Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like
49 | d1rh6a_ |
| not modelled | 23.3 | 21 | Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:Excisionase-like
50 | d1w0ba_ |
| not modelled | 21.7 | 21 | Fold:Spectrin repeat-like Superfamily:Alpha-hemoglobin stabilizing protein AHSP Family:Alpha-hemoglobin stabilizing protein AHSP
51 | d1muja2 |
| not modelled | 21.7 | 34 | Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain
52 | c3rmrA_ |
| not modelled | 19.9 | 33 | PDB header:protein binding Chain: A: PDB Molecule:avirulence protein; PDBTitle: crystal structure of hyaloperonospora arabidopsidis atr1 effector2 domain
53 | d1jk8a2 |
| not modelled | 19.9 | 24 | Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain
54 | d1vj7a2 |
| not modelled | 18.9 | 26 | Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:RelA/SpoT domain
55 | c2q4dB_ |
| not modelled | 18.7 | 12 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950
56 | c2zc2A_ |
| not modelled | 18.3 | 12 | PDB header:replication Chain: A: PDB Molecule:dnad-like replication protein; PDBTitle: crystal structure of dnad-like replication protein from2 streptococcus mutans ua159, gi 24377835, residues 127-199
57 | d1es0a2 |
| not modelled | 17.9 | 26 | Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain
58 | d2jn4a1 |
| not modelled | 17.8 | 23 | Fold:NifT/FixU barrel-like Superfamily:NifT/FixU-like Family:NifT/FixU
59 | c2jn4A_ |
| not modelled | 17.8 | 23 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein fixu, nift; PDBTitle: solution nmr structure of protein rp4601 from2 rhodopseudomonas palustris. northeast structural genomics3 consortium target rpt2; ontario center for structural4 proteomics target rp4601.
60 | c2pxgA_ |
| not modelled | 17.3 | 17 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein; PDBTitle: nmr solution structure of omla
61 | d1dxsa_ |
| not modelled | 17.1 | 32 | Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain
62 | d3bzra1 |
| not modelled | 16.6 | 25 | Fold:EscU C-terminal domain-like Superfamily:EscU C-terminal domain-like Family:EscU C-terminal domain-like
63 | c3bzrA_ |
| not modelled | 16.6 | 25 | PDB header:membrane protein, protein transport Chain: A: PDB Molecule:escu; PDBTitle: crystal structure of escu c-terminal domain with n262d mutation, space2 group p 41 21 2
64 | c3bd1B_ |
| not modelled | 16.3 | 28 | PDB header:transcription Chain: B: PDB Molecule:cro protein; PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
65 | c3hlzA_ |
| not modelled | 16.2 | 10 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bt_1490; PDBTitle: crystal structure of bt_1490 (np_810393.1) from bacteroides2 thetaiotaomicron vpi-5482 at 1.50 a resolution
66 | d1mvla_ |
| not modelled | 15.9 | 26 | Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
67 | c1mvlA_ |
| not modelled | 15.9 | 26 | PDB header:lyase Chain: A: PDB Molecule:ppc decarboxylase athal3a; PDBTitle: ppc decarboxylase mutant c175s
68 | c3g80B_ |
| not modelled | 15.7 | 29 | PDB header:viral protein Chain: B: PDB Molecule:protein b2; PDBTitle: nodamura virus protein b2, rna-binding domain
69 | c2vy2A_ |
| not modelled | 15.7 | 50 | PDB header:transcription Chain: A: PDB Molecule:protein leafy; PDBTitle: structure of leafy transcription factor from arabidopsis2 thaliana in complex with dna from ag-i promoter
70 | c2dnrA_ |
| not modelled | 15.5 | 15 | PDB header:rna binding protein Chain: A: PDB Molecule:synaptojanin-1; PDBTitle: solution structure of rna binding domain in synaptojanin 1
71 | c3odmE_ |
| not modelled | 15.0 | 17 | PDB header:lyase Chain: E: PDB Molecule:phosphoenolpyruvate carboxylase; PDBTitle: archaeal-type phosphoenolpyruvate carboxylase
72 | c3ogfA_ |
| not modelled | 14.7 | 14 | PDB header:de novo protein Chain: A: PDB Molecule:de novo designed dimeric trefoil-fold sub-domain which PDBTitle: crystal structure of difoil-4p homo-trimer: de novo designed dimeric2 trefoil-fold sub-domain which forms homo-trimer assembly
73 | d2ipqx1 |
| not modelled | 14.2 | 19 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:STY4665 C-terminal domain-like
74 | d2ffca1 |
| not modelled | 14.1 | 9 | Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Decarboxylase
75 | d1gsma1 |
| not modelled | 13.7 | 34 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains
76 | d1ev7a_ |
| not modelled | 13.1 | 29 | Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease NaeI
77 | d1wuua1 |
| not modelled | 13.0 | 18 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:GHMP Kinase, N-terminal domain
78 | d1zbsa1 |
| not modelled | 12.7 | 16 | Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:BadF/BadG/BcrA/BcrD-like
79 | d1u04a1 |
| not modelled | 12.6 | 80 | Fold:SH3-like barrel Superfamily:PAZ domain Family:PAZ domain
80 | d1k82a1 |
| not modelled | 12.2 | 10 | Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins
81 | d2v9va2 |
| not modelled | 11.9 | 33 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB
82 | d1ei7a_ |
| not modelled | 11.8 | 12 | Fold:Four-helical up-and-down bundle Superfamily:TMV-like viral coat proteins Family:TMV-like viral coat proteins
83 | c3da5A_ |
| not modelled | 11.1 | 67 | PDB header:rna binding protein Chain: A: PDB Molecule:argonaute; PDBTitle: crystal structure of piwi/argonaute/zwille(paz) domain from2 thermococcus thioreducens
84 | c1pprO_ |
| not modelled | 10.9 | 23 | PDB header:light-harvesting protein Chain: O: PDB Molecule:peridinin-chlorophyll protein; PDBTitle: peridinin-chlorophyll-protein of amphidinium carterae
85 | c3ofgA_ |
| not modelled | 10.8 | 25 | PDB header:chaperone Chain: A: PDB Molecule:boca/mesd chaperone for ywtd beta-propeller-egf protein 1; PDBTitle: structured domain of caenorhabditis elegans bmy-1
86 | d1qasa3 |
| not modelled | 10.7 | 25 | Fold:TIM beta/alpha-barrel Superfamily:PLC-like phosphodiesterases Family:Mammalian PLC
87 | c2vx6A_ |
| not modelled | 10.4 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:cellvibrio japonicus mannanase cjman26c; PDBTitle: cellvibrio japonicus mannanase cjman26c gal1man4-bound form
88 | d1sv0c_ |
| not modelled | 10.0 | 18 | Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Pointed domain
89 | d1umya_ |
| not modelled | 10.0 | 12 | Fold:TIM beta/alpha-barrel Superfamily:Homocysteine S-methyltransferase Family:Homocysteine S-methyltransferase
90 | d1ykhb1 |
| not modelled | 9.7 | 19 | Fold:Mediator hinge subcomplex-like Superfamily:Mediator hinge subcomplex-like Family:CSE2-like
91 | d1pava_ |
| not modelled | 9.7 | 16 | Fold:IF3-like Superfamily:SirA-like Family:SirA-like
92 | d1xzpa3 |
| not modelled | 9.7 | 35 | Fold:Folate-binding domain Superfamily:Folate-binding domain Family:TrmE formyl-THF-binding domain
93 | c1xzqB_ |
| not modelled | 9.7 | 35 | PDB header:hydrolase Chain: B: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
94 | c3k6qB_ |
| not modelled | 9.6 | 27 | PDB header:ligand binding protein Chain: B: PDB Molecule:putative ligand binding protein; PDBTitle: crystal structure of an antitoxin part of a putative toxin/antitoxin2 system (swol_0700) from syntrophomonas wolfei subsp. wolfei at 1.80 a3 resolution
95 | c3cwyA_ |
| not modelled | 9.5 | 38 | PDB header:unknown function Chain: A: PDB Molecule:protein cagd; PDBTitle: structure of cagd from h. pylori pathogenicity island2 crystallized in the presence of cu(ii) ions
96 | d1alna1 |
| not modelled | 9.5 | 16 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase
97 | c3c01H_ |
| not modelled | 9.4 | 10 | PDB header:membrane protein, protein transport Chain: H: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structural of native spas c-terminal domain
98 | d1ug3a1 |
| not modelled | 9.4 | 15 | Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:MIF4G domain-like
99 | c3czoD_ |
| not modelled | 9.3 | 17 | PDB header:lyase Chain: D: PDB Molecule:histidine ammonia-lyase; PDBTitle: crystal structure of double mutant phenylalanine ammonia-2 lyase from anabaena variabilis

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0