Phyre 2 alignment of P37330 with c1pprO_

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Job Description | P37330
Confidence | 10.95% | Date | Thu Jan 5 11:55:16 GMT 2012
Rank | 84 | Aligned Residues | 22
% Identity | 23% | Template | c1pprO_
PDB info | PDB header:light-harvesting protein | Chain: O: PDB Molecule:peridinin-chlorophyll protein; | PDBTitle: peridinin-chlorophyll-protein of amphidinium carterae
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 649 | 650 | . | . | . | . | . |  |  |  | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | I | L | T | K | E | Q | . | . | . | V | Q | A | S | L | E | N | M | A | K | V | V | D | Q | Q
Query Conservation |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | V | T | S | R | A | D | W | D | N | V | N | A | A | L | G | R | V | I | A | S | V | P | E | N
Template Known Secondary structure |  | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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