Phyre 2 alignment of P37330 with d1vj7a2

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Job Description | P37330
Confidence | 18.95% | Date | Thu Jan 5 11:55:16 GMT 2012
Rank | 54 | Aligned Residues | 27
% Identity | 26% | Template | d1vj7a2
SCOP info | Nucleotidyltransferase | Nucleotidyltransferase | RelA/SpoT domain
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | R | T | P | A | Q | F | V | G | Y | R | G | D | A | A | A | P | T | C | I | L | L | K | N | N | G | L | H | I | E | L | Q | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | A | A | P | K | A | N | . | G | Y | Q | S | I | . | . | . | . | . | H | T | T | V | Y | G | P | K | G | P | I | E | I | Q | I
Template Known Secondary structure |  | T | T | S |  |  | T | T | . |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | S | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 300 | . | . | . | . | . | . |  | . | . | . | 310 | . |  |  |  |  |  | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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