Phyre 2 alignment of P37330 with d2ipqx1

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Job Description | P37330
Confidence | 14.18% | Date | Thu Jan 5 11:55:16 GMT 2012
Rank | 73 | Aligned Residues | 21
% Identity | 19% | Template | d2ipqx1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | STY4665 C-terminal domain-like
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 634 | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | L | R | I | S | S | Q | H | I | A | N | W | L | R | H | G | I | L | T | K | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | S | T | E | L | G | D | L | F | W | S | W | L | R | D | G | L | R | E | G | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 397 | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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