BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (169 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7MGK6 Peptide deformylase 2 n=28 Tax=Gammaproteobacter... 249 3e-65 UniRef50_Q7VQC0 Peptide deformylase n=6 Tax=Gammaproteobacteria ... 207 8e-53 UniRef50_Q65QF2 Peptide deformylase n=5 Tax=Gammaproteobacteria ... 206 2e-52 UniRef50_B8D9R9 Peptide deformylase n=10 Tax=Gammaproteobacteria... 201 1e-50 UniRef50_C1DFV8 Peptide deformylase n=4 Tax=Gammaproteobacteria ... 199 3e-50 UniRef50_Q1QTJ5 Peptide deformylase n=8 Tax=Proteobacteria RepID... 199 3e-50 UniRef50_Q5F5P6 Peptide deformylase n=409 Tax=cellular organisms... 197 8e-50 UniRef50_Q88RR1 Peptide deformylase 1 n=10 Tax=Proteobacteria Re... 191 1e-47 UniRef50_Q3J6U0 Peptide deformylase n=16 Tax=Proteobacteria RepI... 186 2e-46 UniRef50_Q1QET1 Peptide deformylase n=121 Tax=Proteobacteria Rep... 169 4e-41 UniRef50_B8ENG6 Peptide deformylase n=105 Tax=Proteobacteria Rep... 167 2e-40 UniRef50_Q7MCQ2 Peptide deformylase 1 n=57 Tax=Gammaproteobacter... 166 3e-40 UniRef50_B8JDM1 Peptide deformylase n=16 Tax=Bacteria RepID=B8JD... 159 3e-38 UniRef50_C9P8G9 Peptide deformylase n=1 Tax=Vibrio metschnikovii... 157 1e-37 UniRef50_B5YIL7 Peptide deformylase n=41 Tax=Bacteria RepID=DEF_... 153 2e-36 UniRef50_C1F541 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_... 149 3e-35 UniRef50_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetip... 148 7e-35 UniRef50_A5EWL8 Peptide deformylase n=4 Tax=Proteobacteria RepID... 148 8e-35 UniRef50_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine ba... 147 2e-34 UniRef50_Q1QH78 Peptide deformylase n=23 Tax=Alphaproteobacteria... 146 2e-34 UniRef50_A1AXL8 Peptide deformylase n=4 Tax=Gammaproteobacteria ... 146 3e-34 UniRef50_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteri... 145 5e-34 UniRef50_A3PMR8 Peptide deformylase n=5 Tax=Rhodobacteraceae Rep... 143 3e-33 UniRef50_A8ZUK5 Peptide deformylase n=2 Tax=Desulfobacteraceae R... 143 3e-33 UniRef50_Q83CV9 Peptide deformylase 1 n=4 Tax=Coxiella burnetii ... 140 1e-32 UniRef50_C0Z4W7 Peptide deformylase n=4 Tax=Firmicutes RepID=C0Z... 140 2e-32 UniRef50_Q057D2 Peptide deformylase n=2 Tax=Buchnera aphidicola ... 140 2e-32 UniRef50_Q2NCT3 Peptide deformylase n=8 Tax=Sphingomonadales Rep... 137 1e-31 UniRef50_Q8XJL2 Peptide deformylase 1 n=12 Tax=Clostridiales Rep... 137 2e-31 UniRef50_A0LEJ7 Peptide deformylase n=2 Tax=Deltaproteobacteria ... 137 2e-31 UniRef50_B8DMM6 Peptide deformylase n=12 Tax=Desulfovibrionales ... 137 2e-31 UniRef50_B0PFT9 Peptide deformylase n=1 Tax=Anaerotruncus coliho... 135 7e-31 UniRef50_B0TGS8 Peptide deformylase n=14 Tax=Firmicutes RepID=DE... 133 2e-30 UniRef50_Q023V6 Peptide deformylase n=2 Tax=Acidobacteria RepID=... 133 3e-30 UniRef50_Q0BUB2 Peptide deformylase n=14 Tax=Bacteria RepID=Q0BU... 132 3e-30 UniRef50_C0QZQ2 Peptide deformylase n=1 Tax=Brachyspira hyodysen... 132 6e-30 UniRef50_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halop... 131 9e-30 UniRef50_A9KM99 Peptide deformylase n=16 Tax=Bacteria RepID=DEF_... 131 1e-29 UniRef50_C6BVK1 Peptide deformylase n=2 Tax=Desulfovibrio RepID=... 130 2e-29 UniRef50_C1QBP9 Peptide deformylase n=1 Tax=Brachyspira murdochi... 130 2e-29 UniRef50_C4G2R8 Peptide deformylase n=6 Tax=Firmicutes RepID=C4G... 129 3e-29 UniRef50_A4A7C9 Peptide deformylase n=1 Tax=Congregibacter litor... 129 3e-29 UniRef50_A5CF65 Peptide deformylase n=18 Tax=cellular organisms ... 129 4e-29 UniRef50_B3CMB1 Peptide deformylase n=11 Tax=Rickettsiales RepID... 129 4e-29 UniRef50_Q17XD4 Peptide deformylase n=60 Tax=Epsilonproteobacter... 128 6e-29 UniRef50_Q5GTG9 Peptide deformylase n=1 Tax=Wolbachia endosymbio... 128 7e-29 UniRef50_Q0F0I6 Peptide deformylase n=1 Tax=Mariprofundus ferroo... 127 1e-28 UniRef50_O66847 Peptide deformylase n=3 Tax=Aquificaceae RepID=D... 127 1e-28 UniRef50_C8WW76 Peptide deformylase n=2 Tax=Alicyclobacillus aci... 127 1e-28 UniRef50_B3DUG9 Peptide deformylase n=1 Tax=Methylacidiphilum in... 127 2e-28 UniRef50_C1A607 Peptide deformylase n=1 Tax=Gemmatimonas auranti... 127 2e-28 UniRef50_D2R5E8 Peptide deformylase n=1 Tax=Pirellula staleyi DS... 126 3e-28 UniRef50_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola ... 126 3e-28 UniRef50_D0LH18 Peptide deformylase n=2 Tax=Nannocystineae RepID... 125 6e-28 UniRef50_B3QS23 Peptide deformylase n=1 Tax=Chloroherpeton thala... 123 3e-27 UniRef50_C0ZE47 Peptide deformylase n=1 Tax=Brevibacillus brevis... 122 3e-27 UniRef50_B1GZ10 Peptide deformylase n=1 Tax=uncultured Termite g... 122 3e-27 UniRef50_D0XQM3 Peptide deformylase n=2 Tax=Alphaproteobacteria ... 122 4e-27 UniRef50_C0QI55 Peptide deformylase n=1 Tax=Desulfobacterium aut... 122 6e-27 UniRef50_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychro... 121 7e-27 UniRef50_Q1Q7Q2 Peptide deformylase n=1 Tax=Candidatus Kuenenia ... 121 7e-27 UniRef50_A5D1C0 Peptide deformylase n=3 Tax=Clostridia RepID=DEF... 121 9e-27 UniRef50_A8U9S1 Peptide deformylase n=14 Tax=Lactobacillales Rep... 121 9e-27 UniRef50_P94462 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF... 120 1e-26 UniRef50_Q2S316 Peptide deformylase n=2 Tax=Rhodothermaceae RepI... 120 2e-26 UniRef50_D1C7I8 Peptide deformylase n=1 Tax=Sphaerobacter thermo... 119 3e-26 UniRef50_C4ZEV9 Peptide deformylase n=9 Tax=Clostridia RepID=DEF... 119 3e-26 UniRef50_B5EMH5 Peptide deformylase n=4 Tax=Proteobacteria RepID... 119 4e-26 UniRef50_C6V4P2 Peptide deformylase n=1 Tax=Neorickettsia ristic... 119 4e-26 UniRef50_C7CNZ7 Peptide deformylase n=24 Tax=Enterococcus RepID=... 119 5e-26 UniRef50_A6C970 Peptide deformylase n=2 Tax=Planctomycetaceae Re... 119 5e-26 UniRef50_C1DV92 Peptide deformylase n=4 Tax=Hydrogenothermaceae ... 119 5e-26 UniRef50_A6Q676 Peptide deformylase n=5 Tax=Epsilonproteobacteri... 118 7e-26 UniRef50_Q3ZXA9 Peptide deformylase n=5 Tax=Dehalococcoides RepI... 117 1e-25 UniRef50_C9KJ27 Peptide deformylase n=1 Tax=Mitsuokella multacid... 117 1e-25 UniRef50_Q2GE16 Peptide deformylase n=8 Tax=Rickettsiales RepID=... 117 2e-25 UniRef50_A3DCX4 Peptide deformylase n=24 Tax=Clostridia RepID=DE... 116 2e-25 UniRef50_A2BU25 Peptide deformylase n=50 Tax=cellular organisms ... 116 3e-25 UniRef50_A4WNU7 Peptide deformylase n=25 Tax=Rhodobacterales Rep... 116 3e-25 UniRef50_Q1CVW8 Peptide deformylase n=2 Tax=Cystobacterineae Rep... 115 5e-25 UniRef50_D1BVC6 Peptide deformylase n=1 Tax=Xylanimonas cellulos... 115 6e-25 UniRef50_D2NSH9 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothi... 115 7e-25 UniRef50_B9MR36 Peptide deformylase n=97 Tax=Firmicutes RepID=DE... 115 7e-25 UniRef50_A6DUA1 Peptide deformylase n=1 Tax=Lentisphaera araneos... 115 7e-25 UniRef50_UPI0001C165F0 Polypeptide deformylase n=1 Tax=Raphidiop... 115 8e-25 UniRef50_A0Q456 Peptide deformylase n=18 Tax=Francisella RepID=A... 115 8e-25 UniRef50_C4Z519 Peptide deformylase n=9 Tax=Clostridiales RepID=... 114 1e-24 UniRef50_D2MKZ1 Formylmethionine deformylase n=1 Tax=Candidatus ... 113 2e-24 UniRef50_A6TRW8 Peptide deformylase n=4 Tax=Clostridiales RepID=... 113 3e-24 UniRef50_C7NGP0 Peptide deformylase n=2 Tax=Micrococcineae RepID... 112 4e-24 UniRef50_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula balti... 112 4e-24 UniRef50_D1ATH4 Peptide deformylase n=1 Tax=Anaplasma centrale s... 112 6e-24 UniRef50_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans ... 112 6e-24 UniRef50_A5ILS1 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_... 111 8e-24 UniRef50_A7G6C0 Peptide deformylase n=14 Tax=Clostridium RepID=A... 111 8e-24 UniRef50_Q1GDF5 Peptide deformylase n=18 Tax=Rhodobacterales Rep... 111 9e-24 UniRef50_D1PY14 Peptide deformylase n=2 Tax=Prevotella RepID=D1P... 111 1e-23 UniRef50_B3E344 Peptide deformylase n=11 Tax=Bacteria RepID=B3E3... 110 1e-23 UniRef50_Q3B2U9 Peptide deformylase n=11 Tax=Chlorobiaceae RepID... 110 2e-23 UniRef50_Q8NQ46 Peptide deformylase 1 n=8 Tax=Corynebacterium Re... 110 2e-23 UniRef50_D1VET6 Peptide deformylase n=1 Tax=Frankia sp. EuI1c Re... 110 2e-23 UniRef50_D2N0L8 Peptide deformylase n=1 Tax=Campylobacter jejuni... 110 3e-23 UniRef50_D1VSE6 Peptide deformylase n=1 Tax=Peptoniphilus lacrim... 109 3e-23 UniRef50_C1ZAV5 Peptide deformylase n=1 Tax=Planctomyces limnoph... 109 4e-23 UniRef50_B9XGP3 Peptide deformylase n=1 Tax=bacterium Ellin514 R... 109 4e-23 UniRef50_B0VID6 Peptide deformylase n=1 Tax=Candidatus Cloacamon... 108 5e-23 UniRef50_D1XJU9 Peptide deformylase n=5 Tax=Streptomyces RepID=D... 108 5e-23 UniRef50_Q92HU7 Peptide deformylase-like n=10 Tax=cellular organ... 108 6e-23 UniRef50_B9L0C1 Peptide deformylase n=1 Tax=Thermomicrobium rose... 108 6e-23 UniRef50_A8LLB9 Peptide deformylase n=16 Tax=Rhodobacterales Rep... 108 7e-23 UniRef50_A7GFN2 Peptide deformylase n=12 Tax=Clostridiales RepID... 108 1e-22 UniRef50_D2NTP6 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothi... 107 1e-22 UniRef50_B5YF46 Peptide deformylase n=2 Tax=Dictyoglomus RepID=D... 107 1e-22 UniRef50_Q826Q0 Peptide deformylase 2 n=20 Tax=Actinomycetales R... 107 2e-22 UniRef50_D1B5G7 Peptide deformylase n=3 Tax=Synergistaceae RepID... 107 2e-22 UniRef50_Q9XAQ2 Peptide deformylase 3 n=23 Tax=Actinomycetales R... 107 2e-22 UniRef50_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae... 106 3e-22 UniRef50_A3EQF2 Peptide deformylase n=3 Tax=Leptospirillum RepID... 106 4e-22 UniRef50_Q1AVZ8 Peptide deformylase n=2 Tax=Bacteria RepID=Q1AVZ... 106 4e-22 UniRef50_C8W757 Peptide deformylase n=2 Tax=Atopobium RepID=C8W7... 106 4e-22 UniRef50_C9RL37 Peptide deformylase n=1 Tax=Fibrobacter succinog... 105 4e-22 UniRef50_C8PRC6 Peptide deformylase n=1 Tax=Treponema vincentii ... 105 5e-22 UniRef50_B2KD65 Peptide deformylase n=1 Tax=Elusimicrobium minut... 105 5e-22 UniRef50_B7RJW6 Peptide deformylase n=1 Tax=Roseobacter sp. GAI1... 104 1e-21 UniRef50_A9DWU1 Peptide deformylase n=2 Tax=Rhodobacteraceae Rep... 104 1e-21 UniRef50_B5J0U4 Peptide deformylase n=1 Tax=Octadecabacter antar... 104 1e-21 UniRef50_D0WE84 Peptide deformylase n=1 Tax=Slackia exigua ATCC ... 104 1e-21 UniRef50_B9S632 Polypeptide deformylase, putative n=2 Tax=fabids... 104 1e-21 UniRef50_C0WD89 Peptide deformylase n=1 Tax=Acidaminococcus sp. ... 103 2e-21 UniRef50_B3T9T4 Putative Polypeptide deformylase n=1 Tax=uncultu... 103 2e-21 UniRef50_A6L9R8 Peptide deformylase n=8 Tax=Bacteroidales RepID=... 103 2e-21 UniRef50_C1MGI0 Peptide deformylase n=2 Tax=Viridiplantae RepID=... 103 2e-21 UniRef50_Q8REF0 Peptide deformylase n=15 Tax=Fusobacterium RepID... 103 2e-21 UniRef50_Q88EA7 Peptide deformylase 2 n=45 Tax=Bacteria RepID=DE... 103 2e-21 UniRef50_Q8XJX0 Peptide deformylase 2 n=8 Tax=Clostridium perfri... 103 3e-21 UniRef50_Q8PGV2 Peptide deformylase 1 n=12 Tax=Proteobacteria Re... 103 3e-21 UniRef50_B0RBE6 Peptide deformylase n=5 Tax=Actinobacteria (clas... 103 3e-21 UniRef50_A8Z5V9 Peptide deformylase n=3 Tax=Candidatus Sulcia mu... 102 4e-21 UniRef50_Q83GH8 Peptide deformylase n=2 Tax=Tropheryma whipplei ... 102 4e-21 UniRef50_C7H120 Peptide deformylase n=1 Tax=Eubacterium saphenum... 102 5e-21 UniRef50_A3JYF4 Peptide deformylase n=1 Tax=Sagittula stellata E... 102 5e-21 UniRef50_D2PNQ8 Peptide deformylase n=2 Tax=Propionibacterineae ... 102 6e-21 UniRef50_B9ZK41 Peptide deformylase n=1 Tax=Thioalkalivibrio sp.... 101 1e-20 UniRef50_C8WHT7 Peptide deformylase n=3 Tax=Coriobacteriaceae Re... 101 1e-20 UniRef50_A5FVG7 Peptide deformylase n=1 Tax=Acidiphilium cryptum... 101 1e-20 UniRef50_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniph... 100 1e-20 UniRef50_B5G8K4 Peptide deformylase n=1 Tax=Streptomyces sp. SPB... 100 2e-20 UniRef50_C3PG26 Peptide deformylase n=7 Tax=Corynebacterium RepI... 100 2e-20 UniRef50_A3EQQ7 Peptide deformylase n=2 Tax=Leptospirillum sp. G... 100 3e-20 UniRef50_B2V9A0 Peptide deformylase n=4 Tax=Hydrogenothermaceae ... 100 3e-20 UniRef50_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chlorofle... 100 3e-20 UniRef50_B2GGT8 Peptide deformylase n=8 Tax=Actinomycetales RepI... 100 3e-20 UniRef50_B4DC77 Peptide deformylase n=2 Tax=Verrucomicrobia RepI... 100 3e-20 UniRef50_Q0SDG2 Peptide deformylase n=2 Tax=Actinomycetales RepI... 100 3e-20 UniRef50_B5Y7H9 Peptide deformylase n=1 Tax=Coprothermobacter pr... 99 4e-20 UniRef50_C2D8V2 Peptide deformylase n=1 Tax=Atopobium vaginae DS... 99 4e-20 UniRef50_D1CBE7 Peptide deformylase n=1 Tax=Thermobaculum terren... 99 4e-20 UniRef50_B3ETT4 Peptide deformylase n=1 Tax=Candidatus Amoebophi... 99 5e-20 UniRef50_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscu... 99 5e-20 UniRef50_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio pe... 99 5e-20 UniRef50_Q6NH22 Peptide deformylase n=1 Tax=Corynebacterium diph... 99 6e-20 UniRef50_P73441 Peptide deformylase n=10 Tax=Cyanobacteria RepID... 99 6e-20 UniRef50_B2S3Z6 Peptide deformylase n=2 Tax=Treponema pallidum R... 99 6e-20 UniRef50_B9Z3A2 Peptide deformylase n=1 Tax=Lutiella nitroferrum... 99 6e-20 UniRef50_A3ST83 Peptide deformylase n=2 Tax=Sulfitobacter RepID=... 99 7e-20 UniRef50_B8HH62 Peptide deformylase n=11 Tax=Actinobacteridae Re... 99 7e-20 UniRef50_D0U631 Peptide deformylase n=2 Tax=uncultured actinobac... 98 8e-20 UniRef50_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitre... 98 1e-19 UniRef50_Q9FCA2 Peptide deformylase 2 n=4 Tax=Streptomyces RepID... 98 1e-19 UniRef50_D1N2T1 Peptide deformylase n=1 Tax=Victivallis vadensis... 97 2e-19 UniRef50_A4RVA1 Peptide deformylase, organellar n=2 Tax=Eukaryot... 97 2e-19 UniRef50_A9WHG7 Peptide deformylase n=5 Tax=Chloroflexaceae RepI... 97 2e-19 UniRef50_Q5VNN5 Peptide deformylase 1B, chloroplastic n=3 Tax=Or... 97 2e-19 UniRef50_O51092 Peptide deformylase n=20 Tax=Borrelia RepID=DEF_... 96 3e-19 UniRef50_A3M399 Peptide deformylase n=16 Tax=Acinetobacter RepID... 96 3e-19 UniRef50_Q0BUX2 Peptide deformylase n=11 Tax=Alphaproteobacteria... 96 4e-19 UniRef50_Q8I372 Formylmethionine deformylase, putative n=2 Tax=P... 96 5e-19 UniRef50_C0VXF2 Peptide deformylase n=2 Tax=Corynebacterium gluc... 96 5e-19 UniRef50_B3L389 Formylmethionine deformylase, putative n=2 Tax=P... 96 5e-19 UniRef50_C9LLK7 Peptide deformylase n=1 Tax=Dialister invisus DS... 96 5e-19 UniRef50_A1SJX1 Peptide deformylase n=1 Tax=Nocardioides sp. JS6... 96 6e-19 UniRef50_UPI00017437A9 peptide deformylase n=6 Tax=candidate div... 96 7e-19 UniRef50_Q72H33 Peptide deformylase n=8 Tax=Deinococci RepID=DEF... 95 8e-19 UniRef50_C6HZ73 Peptide deformylase n=1 Tax=Leptospirillum ferro... 95 9e-19 UniRef50_A5FGV5 Peptide deformylase n=59 Tax=cellular organisms ... 95 1e-18 UniRef50_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromo... 95 1e-18 UniRef50_A0LUE1 Peptide deformylase n=4 Tax=Actinomycetales RepI... 95 1e-18 UniRef50_A8LE21 Peptide deformylase n=17 Tax=Actinomycetales Rep... 94 1e-18 UniRef50_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=4 Tax=co... 94 1e-18 UniRef50_Q7NAK8 Peptide deformylase n=2 Tax=Mycoplasma gallisept... 94 1e-18 UniRef50_C5VIH1 Peptide deformylase n=2 Tax=Prevotella RepID=C5V... 94 2e-18 UniRef50_A9G9J7 Peptide deformylase n=2 Tax=Myxococcales RepID=A... 94 2e-18 UniRef50_Q8G487 Peptide deformylase 2 n=33 Tax=Bacteria RepID=DE... 94 2e-18 UniRef50_A0LDD7 Peptide deformylase n=5 Tax=Proteobacteria RepID... 94 2e-18 UniRef50_Q9K4A0 Peptide deformylase 4 n=7 Tax=Streptomyces RepID... 94 2e-18 UniRef50_Q2RVK0 Peptide deformylase n=2 Tax=Rhodospirillales Rep... 94 2e-18 UniRef50_A3V199 Peptide deformylase n=1 Tax=Loktanella vestfolde... 94 2e-18 UniRef50_B4U7R8 Peptide deformylase n=1 Tax=Hydrogenobaculum sp.... 94 2e-18 UniRef50_Q3SKP4 Peptide deformylase n=6 Tax=Betaproteobacteria R... 93 4e-18 UniRef50_B1ZMD5 Peptide deformylase n=2 Tax=Verrucomicrobia RepI... 93 4e-18 UniRef50_Q2J9M0 Peptide deformylase n=1 Tax=Frankia sp. CcI3 Rep... 92 8e-18 UniRef50_C7NDD2 Peptide deformylase n=4 Tax=Fusobacteriaceae Rep... 92 8e-18 UniRef50_Q8NM41 Peptide deformylase 2 n=13 Tax=Actinomycetales R... 92 8e-18 UniRef50_P63919 Peptide deformylase-like n=42 Tax=Alphaproteobac... 92 8e-18 UniRef50_B6RGY0 Peptide deformylase 1A, chloroplastic n=3 Tax=Ma... 92 9e-18 UniRef50_A0PNK2 Peptide deformylase n=50 Tax=Actinomycetales Rep... 91 1e-17 UniRef50_A6W503 Peptide deformylase n=2 Tax=Actinomycetales RepI... 91 1e-17 UniRef50_A9HS47 Peptide deformylase n=2 Tax=Alphaproteobacteria ... 91 2e-17 UniRef50_Q28V78 Peptide deformylase n=2 Tax=Rhodobacteraceae Rep... 91 2e-17 UniRef50_Q6MD22 Peptide deformylase n=1 Tax=Candidatus Protochla... 91 2e-17 UniRef50_Q15Q99 Peptide deformylase n=1 Tax=Pseudoalteromonas at... 91 2e-17 UniRef50_Q05FG5 Peptide deformylase n=1 Tax=Candidatus Carsonell... 91 2e-17 UniRef50_Q0RM09 Peptide deformylase n=4 Tax=Actinomycetales RepI... 91 2e-17 UniRef50_B0MFU0 Peptide deformylase n=1 Tax=Anaerostipes caccae ... 91 2e-17 UniRef50_A4E6J7 Peptide deformylase n=3 Tax=Collinsella RepID=A4... 90 2e-17 UniRef50_C7PQZ8 Peptide deformylase n=1 Tax=Chitinophaga pinensi... 90 3e-17 UniRef50_B8DUA2 Peptide deformylase n=4 Tax=Bifidobacterium anim... 90 3e-17 UniRef50_C0CWB1 Peptide deformylase n=2 Tax=Clostridium RepID=C0... 90 3e-17 UniRef50_Q253S4 Peptide deformylase n=14 Tax=Chlamydiaceae RepID... 89 5e-17 UniRef50_D1R4B7 Peptide deformylase n=2 Tax=Parachlamydia acanth... 89 7e-17 UniRef50_B0SHH1 Peptide deformylase n=6 Tax=Leptospira RepID=DEF... 88 9e-17 UniRef50_Q8UF49 Peptide deformylase-like n=19 Tax=Rhizobiales Re... 88 1e-16 UniRef50_Q0EWE9 Peptide deformylase n=1 Tax=Mariprofundus ferroo... 87 2e-16 UniRef50_Q9FV53 Peptide deformylase 1A, chloroplastic n=13 Tax=V... 87 2e-16 UniRef50_A9AZ24 Peptide deformylase n=1 Tax=Herpetosiphon aurant... 87 2e-16 UniRef50_Q1RIR7 Peptide deformylase n=2 Tax=Rickettsia bellii Re... 87 3e-16 UniRef50_C3J9U8 Peptide deformylase n=7 Tax=Bacteria RepID=C3J9U... 87 3e-16 UniRef50_D0J8Y3 Peptide deformylase n=2 Tax=Blattabacterium RepI... 86 3e-16 UniRef50_C6X128 Peptide deformylase n=5 Tax=Bacteroidetes RepID=... 86 3e-16 UniRef50_A9EYX4 Peptide deformylase n=1 Tax=Sorangium cellulosum... 86 4e-16 UniRef50_A2SPW1 Peptide deformylase n=1 Tax=Methanocorpusculum l... 86 5e-16 UniRef50_A7BDR6 Peptide deformylase n=1 Tax=Actinomyces odontoly... 86 5e-16 UniRef50_Q6MDT4 Peptide deformylase n=1 Tax=Candidatus Protochla... 85 1e-15 UniRef50_Q7NJV3 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF... 85 1e-15 UniRef50_C0ZWJ9 Peptide deformylase n=2 Tax=Rhodococcus erythrop... 85 1e-15 UniRef50_C7R2E5 Peptide deformylase n=1 Tax=Jonesia denitrifican... 84 1e-15 UniRef50_C1XRQ6 Peptide deformylase n=1 Tax=Meiothermus silvanus... 84 1e-15 UniRef50_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago tr... 82 6e-15 UniRef50_Q4V5F8 IP07194p (Fragment) n=9 Tax=Drosophila RepID=Q4V... 82 7e-15 UniRef50_P47352 Peptide deformylase n=2 Tax=Mycoplasma RepID=DEF... 82 8e-15 UniRef50_UPI000051A696 PREDICTED: similar to CG31373-PA n=1 Tax=... 82 9e-15 UniRef50_B2UMC6 Peptide deformylase n=1 Tax=Akkermansia muciniph... 81 1e-14 UniRef50_B6KT47 Peptide deformylase, putative n=3 Tax=Toxoplasma... 81 1e-14 UniRef50_Q8YVH1 Peptide deformylase 2 n=25 Tax=Bacteria RepID=DE... 81 1e-14 UniRef50_Q9RD27 Peptide deformylase 1 n=10 Tax=Actinomycetales R... 81 1e-14 UniRef50_D2B2I9 Peptide deformylase n=1 Tax=Streptosporangium ro... 80 3e-14 UniRef50_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacte... 80 4e-14 UniRef50_B3CFT5 Peptide deformylase n=2 Tax=Bacteroides RepID=B3... 79 4e-14 UniRef50_A8HMF6 Predicted protein n=2 Tax=Chlamydomonas reinhard... 79 4e-14 UniRef50_Q7V8G6 Peptide deformylase 1 n=78 Tax=Bacteria RepID=DE... 79 5e-14 >UniRef50_Q7MGK6 Peptide deformylase 2 n=28 Tax=Gammaproteobacteria RepID=DEF2_VIBVY Length = 202 Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/168 (72%), Positives = 143/168 (85%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVLQVL PD+RLR VAKPVE+V EIQ+IVDDM ETMY EEGIGLAATQVDIHQRI+V Sbjct: 33 MSVLQVLTFPDDRLRTVAKPVEKVTPEIQKIVDDMIETMYDEEGIGLAATQVDIHQRIVV 92 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+SE+R+E +VLINPE+LEK GE GIEEGCLS+P RALVPRA +V ++ALDRDG F Sbjct: 93 IDISESRNEPMVLINPEILEKRGEDGIEEGCLSVPGARALVPRAAEVTVKALDRDGHEFT 152 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LEAD LLAICIQHE+DHL GKLF+DYLSPLK++RI+ K+ K+ R + Sbjct: 153 LEADDLLAICIQHELDHLQGKLFVDYLSPLKRKRIQDKLAKIKRFNEK 200 >UniRef50_Q7VQC0 Peptide deformylase n=6 Tax=Gammaproteobacteria RepID=DEF_BLOFL Length = 175 Score = 207 bits (528), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 94/166 (56%), Positives = 132/166 (79%), Gaps = 1/166 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+LQ+L+ PD+RLRK+A+ V ++ + ++I+ DMFETMY ++GIGLAATQVDIHQ+IIV Sbjct: 1 MSILQMLYYPDQRLRKIARSVSIISHDTKKIISDMFETMYFQQGIGLAATQVDIHQKIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ID++ N +RLV INP +++K G T I EGCLSIP+ RA VPR++ + +++LD +G F Sbjct: 61 IDLNNNIQKRLVFINPCIIKKIGTITHIIEGCLSIPKIRASVPRSQNIIVQSLDENGNNF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 E+EA LL++CIQHE+DHL+GKLF+DYLSP K QRI +K+ K + Sbjct: 121 EMEATDLLSVCIQHEIDHLLGKLFIDYLSPFKIQRIHKKINKWSTV 166 >UniRef50_Q65QF2 Peptide deformylase n=5 Tax=Gammaproteobacteria RepID=DEF_MANSM Length = 171 Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/168 (63%), Positives = 134/168 (79%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL VL PDERL+ +A+PV E N E+Q +DDMFETMY EEGIGLAATQVD+H+R+I Sbjct: 1 MSVLNVLIYPDERLKTIAEPVTEFNDELQTFIDDMFETMYQEEGIGLAATQVDVHKRVIT 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID++ + E+LVLINPELL+ GETGIEEGCLS+P R VPR EKV ++AL+R G+ F Sbjct: 61 IDITGEKTEQLVLINPELLDGEGETGIEEGCLSLPGLRGFVPRKEKVTVKALNRQGEEFT 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 L ADGLLAICIQHE+DHL G +F DYLSPLK+ R+++K+ KL + +R Sbjct: 121 LHADGLLAICIQHEIDHLNGIVFADYLSPLKRNRMKEKLVKLQKQISR 168 >UniRef50_B8D9R9 Peptide deformylase n=10 Tax=Gammaproteobacteria RepID=DEF_BUCA5 Length = 173 Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 90/164 (54%), Positives = 133/164 (81%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L++L+ PD RLR +AKPV+E+N +IQ+I +DM +TMY EEGIGLAATQV+I +IIV Sbjct: 1 MSLLKILYYPDIRLRILAKPVKEINKKIQKIANDMIDTMYQEEGIGLAATQVNIPLQIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ E + LVLINP++++K G+ IEEGCLSIPE +A +PR+ ++++A++ DG+ E Sbjct: 61 VNTMEQKKNNLVLINPKIIKKEGDISIEEGCLSIPEYQASIPRSNYIQVQAVNLDGEKIE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 +EA +L+ICIQHE+DHL GKLF+DYLS K++RI++K EK+++ Sbjct: 121 IEAKSILSICIQHEIDHLKGKLFIDYLSKFKRERIQKKFEKINK 164 >UniRef50_C1DFV8 Peptide deformylase n=4 Tax=Gammaproteobacteria RepID=DEF_AZOVD Length = 168 Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 98/165 (59%), Positives = 129/165 (78%), Gaps = 1/165 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +AKP+E V+ I+R++DDMFETMYA GIGLAATQV++H+R++V Sbjct: 1 MAILTILEFPDPRLRTIAKPIETVDDGIRRLIDDMFETMYAAPGIGLAATQVNVHKRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE+++E V INPE + E +EGCLS+P V R +KV+IRALDRDG+PF Sbjct: 61 MDLSEDKNEPRVFINPEFEALTEELEPYQEGCLSVPGFYENVDRPQKVRIRALDRDGQPF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 EL A+GLLA+CIQHE DHL GKLF+DYLS LK+ RIR+K+EK R Sbjct: 121 ELVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHR 165 >UniRef50_Q1QTJ5 Peptide deformylase n=8 Tax=Proteobacteria RepID=DEF_CHRSD Length = 170 Score = 199 bits (506), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 100/165 (60%), Positives = 126/165 (76%), Gaps = 1/165 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L +L PDERLR A PVE V+ E +++VDDM ETMY +GIGLAATQVD+H+R+IV Sbjct: 1 MAKLTILEFPDERLRTKAAPVETVDDETRKLVDDMLETMYDAQGIGLAATQVDVHRRVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +DVS++R + VLINPE E ++EGCLSIPE A VPRA +V ++ALDRDG P+ Sbjct: 61 MDVSDDRSQPRVLINPEYTPLGDEREPMQEGCLSIPEYYAEVPRALRVSLKALDRDGNPY 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 ELEADGLLA CIQHE DHL G LF+DYLSPLK+ R+ +K++K R Sbjct: 121 ELEADGLLAHCIQHEYDHLEGVLFVDYLSPLKRDRVLKKMQKRHR 165 >UniRef50_Q5F5P6 Peptide deformylase n=409 Tax=cellular organisms RepID=DEF_NEIG1 Length = 167 Score = 197 bits (502), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 94/161 (58%), Positives = 126/161 (78%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PDERL VAKPVE+V+ I+++V DMFETMY GIGLAATQVD+H+R++V Sbjct: 1 MALLNILQYPDERLHTVAKPVEQVDERIRKLVADMFETMYESRGIGLAATQVDVHERVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D++E+R E V INP ++EK GET EEGCLS+P V RAE+VK+ AL+ G+ F Sbjct: 61 MDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDAVTRAERVKVEALNEKGEKFT 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 LEADGLLAIC+QHE+DHL+G +F++ LS LKQ RI+ K++K Sbjct: 121 LEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLKK 161 >UniRef50_Q88RR1 Peptide deformylase 1 n=10 Tax=Proteobacteria RepID=DEF1_PSEPK Length = 168 Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 91/168 (54%), Positives = 128/168 (76%), Gaps = 1/168 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +AKPV E + +++++DDMFETMY GIGLAATQV++H++++V Sbjct: 1 MAILNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE+R E V INP + E + + G +EGCLS+P V R +V+++A DRDGKPF Sbjct: 61 MDLSEDRSEPRVFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 ELE +GLLA+C+QHE DHL GKLF+DYLS LK+ RI++K+EK R +A Sbjct: 121 ELECEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA 168 >UniRef50_Q3J6U0 Peptide deformylase n=16 Tax=Proteobacteria RepID=DEF_NITOC Length = 167 Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 89/167 (53%), Positives = 122/167 (73%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +LH PD RLR+ A+PV V+ I+++ DDM ETMY GIGLAA QV++ ++++V Sbjct: 1 MAILNILHYPDPRLRRKAQPVAAVDKSIKKLADDMLETMYQAPGIGLAAVQVNVPKQVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+SE++ LVLINPE++ + G+ EEGCLS+PE V RA ++ + LDR+G+ E Sbjct: 61 IDISEDKSSPLVLINPEIVARQGKAESEEGCLSVPEIFEPVTRAAEITVHYLDREGQKQE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L+ LLA CIQHE+DHL GKLF+DY S LK+QRIR+K EK RL A Sbjct: 121 LQTQELLATCIQHELDHLEGKLFIDYFSTLKRQRIRKKAEKRQRLSA 167 >UniRef50_Q1QET1 Peptide deformylase n=121 Tax=Proteobacteria RepID=DEF_PSYCK Length = 184 Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 1/169 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +A PV+EV AEI+ ++ DM ETMY +GIGLAA+QVD H ++IV Sbjct: 1 MALLPILSYPDPRLRTIATPVKEVTAEIKTLITDMIETMYDAQGIGLAASQVDHHIQLIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE++D V INP++ E EEGCLS+P+ V R KV+I ALD +G Sbjct: 61 MDLSEDKDSPRVFINPKVTPLVEEKQPYEEGCLSVPDVYDKVERPNKVRIEALDENGNKI 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + E +GLLA+CIQHEMDHL G +F+DYLS LKQ R R KV K+ +++ + Sbjct: 121 DEEVEGLLAVCIQHEMDHLNGVIFVDYLSRLKQTRARDKVRKVLKIREK 169 >UniRef50_B8ENG6 Peptide deformylase n=105 Tax=Proteobacteria RepID=DEF_METSB Length = 196 Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 89/174 (51%), Positives = 125/174 (71%), Gaps = 6/174 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + ++ +PD+RLR VA+PV V++E++ ++DDM ETMY GIGLAATQ+ + +R+IV Sbjct: 1 MPLRPIIILPDKRLRLVARPVASVDSEVRALMDDMLETMYEAPGIGLAATQIAVDRRVIV 60 Query: 61 IDVSENRDER-----LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 +DV++ RD+ + L NPE+L S E + EEGCLSIPE V R EKV++ LDR Sbjct: 61 LDVAKRRDDSAKADPICLANPEILWASEELSSYEEGCLSIPEFYEEVFRPEKVRVGYLDR 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DG+ E+EADGLLA C+QHE+DHL G LF+D++S LK+ RI +K EK +L A+ Sbjct: 121 DGRRREIEADGLLATCLQHEIDHLNGVLFIDHISRLKRARIIKKFEKAAKLDAQ 174 >UniRef50_Q7MCQ2 Peptide deformylase 1 n=57 Tax=Gammaproteobacteria RepID=DEF1_VIBVY Length = 168 Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/169 (50%), Positives = 120/169 (71%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMY-AEEGIGLAATQVDIHQRII 59 M+VL++L PD RLR +K V +V A +Q ++DD+ ET+Y + G+GLAA QV + I+ Sbjct: 1 MAVLEILTAPDPRLRVQSKEVTDV-AAVQTLIDDLLETLYETDNGVGLAAPQVGREEAIV 59 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID+SENRDE LVL+NP+++ S + +EGCLS+P+ A V R V + ALDR+GK Sbjct: 60 VIDLSENRDEPLVLVNPKVVSGSNKEMGQEGCLSVPDYYADVERYTSVVVEALDRNGKEL 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +E LAI +QHE+DHL G LF+DYLSPLKQQ +KV+K ++L+AR Sbjct: 120 RIETSEFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHNKLRAR 168 >UniRef50_B8JDM1 Peptide deformylase n=16 Tax=Bacteria RepID=B8JDM1_ANAD2 Length = 185 Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 81/167 (48%), Positives = 120/167 (71%), Gaps = 2/167 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ PD L++VA PV+ V+ I+R++DDM ETMYA +G+GLAA Q+ + +R+IVID Sbjct: 2 VREIVIWPDPILKEVAHPVDRVDDGIRRLLDDMAETMYAADGVGLAAPQIAVKKRVIVID 61 Query: 63 VSENRDERLV--LINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 S ++ + + L+NPE++ GE EGCLSIP + V R +V +RALD GKPFE Sbjct: 62 TSPRQEGQTLIHLVNPEIVRGEGELTYTEGCLSIPGEAEDVDRFARVWVRALDYHGKPFE 121 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 LEA+GLLA+ +QHE DHL G +F+D+LS LK++ IR++++KL +A Sbjct: 122 LEAEGLLAVALQHETDHLNGTVFVDHLSSLKRELIRKRMKKLKAQRA 168 >UniRef50_C9P8G9 Peptide deformylase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8G9_VIBME Length = 171 Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 76/162 (46%), Positives = 118/162 (72%), Gaps = 2/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYA-EEGIGLAATQVDIHQRII 59 M+VL++L PD RL+ A+ V+++ + +Q+++DDM ET+Y+ + GIGLA+ QV + ++ Sbjct: 1 MAVLEILTAPDPRLKITAEKVQDIES-VQKLIDDMLETLYSTDNGIGLASVQVGRKEAVV 59 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +ID+S+NRD+ L+LINPE++ S + +EGCLS+P+ A V R V + ALDR G+ Sbjct: 60 IIDLSDNRDQPLILINPEVVSGSNKALGQEGCLSVPDYYAEVERYTSVVVSALDRTGQRI 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +E+D LAI +QHE+DHL G LF+DY+SPLK+Q +KV+K Sbjct: 120 TIESDDFLAIVMQHEIDHLSGNLFIDYISPLKRQMAMKKVKK 161 >UniRef50_B5YIL7 Peptide deformylase n=41 Tax=Bacteria RepID=DEF_THEYD Length = 165 Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 76/162 (46%), Positives = 112/162 (69%), Gaps = 2/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ PDE L+K A+ + E+N ++Q+++D+M ETMY GIGLAA QV + +R+IV Sbjct: 1 MAILEIKKYPDEVLKKKAETISEINGDLQKLIDNMIETMYNANGIGLAAPQVGVLKRLIV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +D S E +VLINPE+ + GE EEGCLS+P + R E+V ++ LDR+GK Sbjct: 61 VDTSPREQNQSLIVLINPEITDSEGEILSEEGCLSLPGFTTRLKRKERVIVKGLDRNGKE 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 E+EA GLLA +QHE+DHL G L +D +SPLK++ R+K + Sbjct: 121 IEIEATGLLARALQHEIDHLDGILLIDKISPLKRELFRKKFK 162 >UniRef50_C1F541 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_ACIC5 Length = 170 Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/166 (46%), Positives = 116/166 (69%), Gaps = 2/166 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + ++ PD L++ A+PV E N E++ +VDDMFE+MY +GIGLAA Q+ I +R+ V Sbjct: 1 MMIRPIVKYPDPVLQQPAEPVTEFNEELRALVDDMFESMYEAKGIGLAAPQIGISKRLTV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 ID+S EN DE++VLINPE++ + G EEGCLS+P+ R V RAEKV +RA + DG+ Sbjct: 61 IDLSFKENPDEKIVLINPEIIHREGRQYEEEGCLSLPDIREKVVRAEKVTVRAQNLDGEW 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 FE++ + LL+ QHE+DHL G LF+ +S LK+ + +++ K+ R Sbjct: 121 FEMDGEELLSRAFQHEIDHLDGVLFIFRISALKRDLVLRRIRKMQR 166 >UniRef50_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP40_9BACT Length = 175 Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 74/161 (45%), Positives = 110/161 (68%), Gaps = 2/161 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+V PD+ LR A+PV+ ++ I ++D+M ETM+A G+GLAA QV I +R+IVID Sbjct: 2 ILEVKTFPDKVLRIKAEPVDSIDESITELLDNMVETMHARSGVGLAAPQVGISKRLIVID 61 Query: 63 VSENRDERLVL--INPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 S +E ++L INPE++ GE EEGCLSIP + V RAEKV ++A+D +GKP+ Sbjct: 62 TSAGENEGMLLRVINPEIISAEGEQVGEEGCLSIPGEYEPVRRAEKVTVKAMDENGKPYT 121 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +EA+G LA QHE+DHL G LF+D L K+ +++ +++ Sbjct: 122 MEAEGFLARAFQHEIDHLDGVLFIDRLPSYKKDTLKKTIKR 162 >UniRef50_A5EWL8 Peptide deformylase n=4 Tax=Proteobacteria RepID=DEF_DICNV Length = 181 Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 80/173 (46%), Positives = 111/173 (64%), Gaps = 12/173 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L PD RLR A+PV + + IV +M+ETMY GIGLAA QV+I QR+IV Sbjct: 1 MAIYSILIHPDPRLRLPAQPVTHFDDALAEIVQNMYETMYHFHGIGLAAPQVNIQQRLIV 60 Query: 61 IDVSENRDE-----------RLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 +DV + E +LVL+NPE++++S E EEGCLS+P Q ALV R + Sbjct: 61 MDVPQRSAEEGEKAEQIPSDKLVLVNPEIVQRSEECQDYEEGCLSLPNQYALVTRPANIT 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +R D G E A GLL++CIQHE+DHL G LF+D+LS LK++R+ +K+ K Sbjct: 121 VRYQDITGATQERAAQGLLSVCIQHEIDHLNGGLFIDHLSRLKRERLEKKLAK 173 >UniRef50_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine bacterium 313 RepID=Q6SHN7_9BACT Length = 185 Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/183 (44%), Positives = 122/183 (66%), Gaps = 18/183 (9%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++L P++ LR+ + V+EV+ ++Q++++DM ETMYA GIGLAA QV + +R+IV Sbjct: 1 MALRKILTEPNKLLREKSLTVKEVDEDLQKLMNDMLETMYAAPGIGLAAIQVGVPKRVIV 60 Query: 61 IDVS----------ENRDER---LVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEK 106 +D+ E +DER + +NPE++ KS + EEGCLS+P Q A + R +K Sbjct: 61 LDIGWRDKPESTNDEKQDERKNPIYFVNPEIITKSTNNSTYEEGCLSVPGQFAEIDRPDK 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV----EKL 162 I+ LD G+P EL A+G+ A CIQHE+DHL G LF+DYLS LK+ I +K+ E+L Sbjct: 121 CHIKYLDYYGQPKELMAEGMFATCIQHEIDHLEGILFIDYLSKLKKSMIVKKLAKQKEQL 180 Query: 163 DRL 165 DR+ Sbjct: 181 DRI 183 >UniRef50_Q1QH78 Peptide deformylase n=23 Tax=Alphaproteobacteria RepID=DEF_NITHX Length = 175 Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 116/176 (65%), Gaps = 9/176 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +++ +PD++LR V++P+E V EI+++ DDMFETMY GIGLA Q+ RII Sbjct: 1 MAIREIIILPDKQLRLVSRPIETVTPEIRKLADDMFETMYDAPGIGLAGIQIAQPLRIIT 60 Query: 61 IDVSENRDER-------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRAL 112 +D++ RDE + INPE+L S E + EEGCLSIPE V R +V++R Sbjct: 61 MDLA-RRDEEGELTPRPRIFINPEILSASEELSTYEEGCLSIPEYYEEVERPARVRVRFT 119 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 D DGK E +A+G+ A CIQHE+DHL G LF+D++S LK+ R+ +K K +L A+ Sbjct: 120 DLDGKVHEEDAEGIYATCIQHEIDHLNGVLFVDHISKLKRDRVVKKFTKAAKLAAK 175 >UniRef50_A1AXL8 Peptide deformylase n=4 Tax=Gammaproteobacteria RepID=A1AXL8_RUTMC Length = 185 Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/165 (46%), Positives = 104/165 (63%), Gaps = 21/165 (12%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L +L+ PD+RLR AK V ++ IQ ++ DMFET+YA++GIGLAATQVD H +++VID Sbjct: 2 ILPILNYPDKRLRTKAKHVNVIDETIQTLIKDMFETIYAKDGIGLAATQVDQHLQVVVID 61 Query: 63 VSEN---------------------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALV 101 + N + L INP + EK G+ EGCLS+P+ +A V Sbjct: 62 LEPNSQDDYQLFLKNFQRSSHKQSQKHHPLCFINPRIKEKDGQEKHIEGCLSVPDFQAEV 121 Query: 102 PRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 RA +K+ AL+ G+ F L+A GLLAICIQHE+DHL G LF+DY Sbjct: 122 QRANHIKVEALNEKGEVFTLQATGLLAICIQHELDHLKGVLFVDY 166 >UniRef50_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJL6_BDEBA Length = 201 Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 74/179 (41%), Positives = 114/179 (63%), Gaps = 20/179 (11%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 ++++L PD +LR+V++PV+ EI ++ +DM ETMY GIGLAA QV R++VID Sbjct: 2 IMKILTFPDPKLREVSQPVKTFGPEIAKLAEDMVETMYHANGIGLAAPQVGELVRMVVID 61 Query: 63 VSENRDER-------------------LVLINPELLEKSGETGIEEGCLSIPEQRALVPR 103 + +DE+ L+LINPE+++ G+T +EGCLSIP V R Sbjct: 62 -TRPKDEKGRRYKYEEMTELEAAVKQPLILINPEIVKGEGKTTFDEGCLSIPGYYETVER 120 Query: 104 AEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 ++++A D +GK + ++ DGLLAIC+QHEMDHL G LF+D+LS +K +I+ +++K Sbjct: 121 YNYIEMKAFDVNGKEYIVKTDGLLAICMQHEMDHLEGTLFIDHLSFVKGNKIKNQIKKY 179 >UniRef50_A3PMR8 Peptide deformylase n=5 Tax=Rhodobacteraceae RepID=A3PMR8_RHOS1 Length = 177 Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 74/162 (45%), Positives = 108/162 (66%), Gaps = 4/162 (2%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRD- 68 PD RL+K+ PV ++ +++R+ DDM TMY GIGLAA QV + +R+IV+D ++ D Sbjct: 9 PDPRLKKICDPVGQITDDLRRLADDMLATMYDAPGIGLAAPQVGVVRRLIVLDCNKESDG 68 Query: 69 --ERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 + ++NPE++ +S + + EEGCLS+P A V R +VK+R DG+ E + G Sbjct: 69 ARRPVAMVNPEVVWRSEDVSTYEEGCLSLPNVFADVERPAEVKVRWTGLDGREEEEQFAG 128 Query: 126 LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L A C+QHE+DHL GKLF+DYL PLK+Q I +K+EK R +A Sbjct: 129 LWATCVQHEIDHLDGKLFIDYLRPLKRQMITRKMEKFKRAQA 170 >UniRef50_A8ZUK5 Peptide deformylase n=2 Tax=Desulfobacteraceae RepID=DEF_DESOH Length = 173 Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 73/164 (44%), Positives = 115/164 (70%), Gaps = 3/164 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL ++ P + L+ A PV ++ ++Q+++DDM +TMYA +G+GLAA QVD R+++ Sbjct: 1 MTVLDIVTYPADVLKDGALPVANIDGKLQQLIDDMAQTMYAHQGVGLAAVQVDSGLRLVI 60 Query: 61 IDVSENRDERL--VLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGK 117 DVS+ R+++ V+INPE++ GE E EGCLS+PE R V RA V++ +DR+G+ Sbjct: 61 YDVSDQREKQQFRVVINPEVVAVDGECVSEQEGCLSVPELRTDVKRAATVRVEGVDREGR 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 P ++A+GL AI +QHE+DHL G L +D S LK++ ++KV+K Sbjct: 121 PLVIDAEGLEAIVLQHEIDHLNGTLILDRASRLKRELYKRKVQK 164 >UniRef50_Q83CV9 Peptide deformylase 1 n=4 Tax=Coxiella burnetii RepID=DEF1_COXBU Length = 170 Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 4/166 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAA-TQVDIH--QRII 59 + ++L PD RL+ A+ VE+ + +Q+++D+MFET YA A TQ+D+ + I Sbjct: 1 MFKILQYPDPRLKTAAQRVEKFDDALQKMIDEMFETHYAATNCAALAATQLDMENPKHIT 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRA-LVPRAEKVKIRALDRDGKP 118 VID S N+D+ L L+N E++E+SGE EEGC+S+ V RA K+K+RA DR GKP Sbjct: 61 VIDFSPNKDQPLCLVNAEIIERSGEHTEEEGCMSVGGGTFEKVTRAAKIKVRARDRYGKP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E EADG +A CIQHE+DHL G +F+D LS LK+ RI +++ KL R Sbjct: 121 VEFEADGFMAKCIQHELDHLNGIIFLDRLSTLKRGRIDKRLGKLRR 166 >UniRef50_C0Z4W7 Peptide deformylase n=4 Tax=Firmicutes RepID=C0Z4W7_BREBN Length = 171 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/174 (46%), Positives = 115/174 (66%), Gaps = 8/174 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+V Q+L D LRKVAKPVEE+N + +++D+M ET+YA +G GLAA Q+ I +R++ Sbjct: 1 MAVKQILPFGDPILRKVAKPVEELNEKTFKLLDEMAETLYAADGRAGLAAPQIGILRRVV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 V+D + E LINPE++E+SGE E CLS P V RAE VK++ L+R G+ Sbjct: 61 VMDCGDGLIE---LINPEIIERSGEQIGMEACLSFPGYYGNVKRAEHVKVKTLNRQGEEM 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL--SPLKQQRIRQKVEKLD--RLKARA 169 L DG LA+C+QHE+DHL G LF+D++ L ++ RQKV+ L+ RL +A Sbjct: 118 ILAGDGFLAVCMQHEIDHLDGILFVDHVQEKWLYHEKTRQKVDVLEVIRLTKKA 171 >UniRef50_Q057D2 Peptide deformylase n=2 Tax=Buchnera aphidicola (Cinara cedri) RepID=DEF_BUCCC Length = 149 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 73/149 (48%), Positives = 109/149 (73%), Gaps = 1/149 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ ++L PD RLR ++KP++ +N + ++I+ DMF+TMYA GIGLAA Q++I ++IIV Sbjct: 1 MSIRKILQFPDYRLRLLSKPIKIINKKTKKIIYDMFDTMYANNGIGLAAPQINILKQIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 I + LVLINP +L+K+ + EGCLSIP++ A + R+ +KI+A++ GK F Sbjct: 61 ISSLKPTMSELVLINPVILKKNKKYINTIEGCLSIPKKTAKIKRSSCIKIQAINTYGKSF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 L A LL+ICIQHE+DHL+GKLF+DY++ Sbjct: 121 TLTAKSLLSICIQHEIDHLIGKLFIDYIN 149 >UniRef50_Q2NCT3 Peptide deformylase n=8 Tax=Sphingomonadales RepID=DEF_ERYLH Length = 194 Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 119/190 (62%), Gaps = 28/190 (14%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 M++ ++L +PD RL+ V++PV +E N +++++VDDMFETMYA GIGLAA QV + +R+ Sbjct: 1 MAIREILEVPDPRLKTVSEPVQPDEFNDDLKQLVDDMFETMYAAPGIGLAAIQVGVPKRV 60 Query: 59 IVIDVSEN-------------------------RDERLVLINPELLEKSGE-TGIEEGCL 92 +VID+ E +++ + INPE+++ + E + +EGCL Sbjct: 61 LVIDLQEPDMDAEPEECGHDHGDGEGAHKHYPVKNDPRIFINPEIIDPNEELSTYQEGCL 120 Query: 93 SIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 S+PE A V R + ++ D GK + + DGLLA C+QHEMDHL G LF+D+LS LK+ Sbjct: 121 SVPEIYADVDRPKTCTVKYQDLTGKTHQEDLDGLLATCLQHEMDHLEGILFIDHLSRLKK 180 Query: 153 QRIRQKVEKL 162 Q +K++K+ Sbjct: 181 QMALKKLKKM 190 >UniRef50_Q8XJL2 Peptide deformylase 1 n=12 Tax=Clostridiales RepID=DEF1_CLOPE Length = 147 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/146 (50%), Positives = 98/146 (67%), Gaps = 1/146 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + DE LRK + V+++N I+ +V+DM ETMY G+GLA+ QV I +RI V Sbjct: 1 MAIRNLRFNDDEILRKKCRVVDDINDRIKVLVEDMIETMYENNGVGLASPQVGILKRIFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D + R V INPE+LEKSGE EEGCLS+P + V RA K+KI+ALD +G F Sbjct: 61 VDAMDGAGSR-VFINPEILEKSGEQTDEEGCLSLPGRHKPVKRANKIKIKALDVNGNEFV 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDY 146 L+A+G LA IQHE DHL G LF+D+ Sbjct: 120 LDAEGFLARAIQHEYDHLEGVLFIDH 145 >UniRef50_A0LEJ7 Peptide deformylase n=2 Tax=Deltaproteobacteria RepID=DEF_SYNFM Length = 170 Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/154 (44%), Positives = 101/154 (65%), Gaps = 2/154 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + PD LR+ A VE ++ + +++DDM ETMY GIGLAA QV +IV Sbjct: 1 MAILDICTYPDPILRQKAASVENIDEALIKLIDDMTETMYEAPGIGLAANQVGRSLSLIV 60 Query: 61 IDVSENRDER--LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +D+ +E +VLINP+++ GE EEGCLS+PE + V R +V +R RDGK Sbjct: 61 VDLQRQDEEHGLIVLINPQIVATQGEITWEEGCLSVPEYFSAVKRHAEVVVRGYGRDGKE 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 E++A GLLA+ +QHE+DHL G+LF+D L+P+ + Sbjct: 121 MEIQAGGLLAVALQHEIDHLEGRLFIDRLNPITR 154 >UniRef50_B8DMM6 Peptide deformylase n=12 Tax=Desulfovibrionales RepID=B8DMM6_DESVM Length = 184 Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 3/167 (1%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 +VL PD RL + + E+ EI+++ DM ETMY ++GIGLAA QV H R+IV+DVS Sbjct: 4 EVLQYPDPRLAVECEDITEITDEIRQLAADMAETMYRQDGIGLAAPQVGEHCRLIVVDVS 63 Query: 65 --ENRDERLVLINPELLEKSGETGIEEGCLSIPE-QRALVPRAEKVKIRALDRDGKPFEL 121 E R+ + +NP L + EEGCLS+P RA V R++ V++ A D DG + Sbjct: 64 GPEKREALMTFVNPRLELTGDKVDSEEGCLSVPGGYRATVTRSDTVRLTARDLDGNEVCM 123 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +ADGLLA+C+QHE+DHL G LF+D++S LK+ +V+K+ + R Sbjct: 124 DADGLLAVCLQHEVDHLKGTLFIDHISRLKRTLYDSRVKKMQKNAPR 170 >UniRef50_B0PFT9 Peptide deformylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT9_9FIRM Length = 155 Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 69/145 (47%), Positives = 101/145 (69%), Gaps = 4/145 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L DERLRK ++PV + N + ++DDM+ETM + G+G+AA QV + +R +V Sbjct: 1 MALRNILKEGDERLRKKSRPVTDFNERLWTLLDDMYETM-KDGGVGIAAPQVGVLRRAVV 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E + E L+NP ++E+SG+ EGCLSIP Q LV R +++++A DR GKPFE Sbjct: 60 IDVGEGKHE---LVNPVIVEQSGDQCGGEGCLSIPGQYGLVHRPAQLRLKAQDRYGKPFE 116 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 LEA+G A+ + HE+DHL G LF+D Sbjct: 117 LEAEGYFAVAVCHEVDHLDGILFID 141 >UniRef50_B0TGS8 Peptide deformylase n=14 Tax=Firmicutes RepID=DEF_HELMI Length = 151 Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/145 (46%), Positives = 97/145 (66%), Gaps = 3/145 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++L + D LR+ AKPV N+ + R++DDMF+TM A G+GLAA Q+ I +R+ V Sbjct: 1 MAVYEILKMGDPVLREKAKPVTRFNSNLGRLIDDMFDTMAAARGVGLAAPQIGIGKRVCV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++V + R E L+NPE++E GE EGCLSIP+ V R ++V+++A DR G+ F Sbjct: 61 VEVGKRRFE---LVNPEIIEAEGEQCDAEGCLSIPDYTGRVKRFQRVRVKAQDRKGETFI 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 E LLA+ QHE+DHL G LF+D Sbjct: 118 AEGTDLLAVAFQHEIDHLDGILFVD 142 >UniRef50_Q023V6 Peptide deformylase n=2 Tax=Acidobacteria RepID=Q023V6_SOLUE Length = 171 Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/165 (44%), Positives = 108/165 (65%), Gaps = 3/165 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 V ++ D L + A V E + E+ + +DDMFE+MYA +G+GLAA Q+ + ++I VI Sbjct: 2 VYPIVKFGDPVLEREADTVTEFDTPELHKFLDDMFESMYAAKGVGLAAPQIGVSKKIAVI 61 Query: 62 DVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DVS EN D++LV+INP++L+ G+ EEGCLSIP R V RA V IRA + G+ F Sbjct: 62 DVSNGENADDKLVIINPKILKIDGKQEGEEGCLSIPGFREQVRRARCVTIRAQNAKGEEF 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E + LLA HE DHL G+L++ ++S LK+ +++K++KL R Sbjct: 122 EKTGEDLLARAFLHETDHLYGRLYITHISALKRDLMKRKIKKLQR 166 >UniRef50_Q0BUB2 Peptide deformylase n=14 Tax=Bacteria RepID=Q0BUB2_GRABC Length = 205 Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/165 (46%), Positives = 108/165 (65%), Gaps = 3/165 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQR-IVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L +L P + L+ A+PV +A + R +V MF TMY GIGLAA Q+D R+ V+ Sbjct: 36 LLPILIAPHKTLKTRARPVTAGDASLIRDLVPRMFATMYKAPGIGLAAPQIDSLLRLAVV 95 Query: 62 DVS-ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DVS +++ LVLINP+++ +S E EEGCLS+P Q A V R ++K+R D DG Sbjct: 96 DVSPDDQKAPLVLINPDIIARSEEMATREEGCLSLPNQYADVTRPARIKLRYEDLDGSRR 155 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E+EAD LLA CIQHE+DHL G LF+D+LS LK+ + +++ K R Sbjct: 156 EMEADDLLATCIQHEIDHLDGILFVDHLSTLKRNMLMRRLAKEQR 200 >UniRef50_C0QZQ2 Peptide deformylase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=DEF_BRAHW Length = 187 Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/158 (43%), Positives = 110/158 (69%), Gaps = 6/158 (3%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE- 69 DERL+KV++ +E+++ EI ++DDMFETMY E G+GLAA Q+ + +R++VI V + DE Sbjct: 10 DERLQKVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGVLKRLVVISVPDFDDEE 69 Query: 70 ----RLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 +L LINPE++ + ET +EEGCLS PE R V R ++K++ LDR+G L+A+ Sbjct: 70 KPDFKLALINPEIIWHNDETESLEEGCLSFPEIRDDVARYTQIKVKYLDREGNEQILDAE 129 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 +A +QHE+DH G F+D L +++R+++++++L Sbjct: 130 NYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKEL 167 >UniRef50_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWW4_HALHL Length = 162 Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 70/155 (45%), Positives = 96/155 (61%), Gaps = 1/155 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++L PD RLR+ + PVE + + +VDDM ETM+A IGLAA QVD+ QRI+V Sbjct: 1 MATLEILEHPDPRLRQPSAPVERFDQALCELVDDMIETMHARSAIGLAAPQVDVRQRIVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R V INPE+ S IEE CLS+P Q+ LV R +V +RA D G+ F Sbjct: 61 CCTEPAQAPR-VFINPEITGSSLPGYIEESCLSVPGQQGLVRRPTRVSVRAQDTAGERFH 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 + + L A+C+ HE+DHL G LF+D L K+ +I Sbjct: 120 CKLENLDAVCLHHEIDHLDGTLFIDRLPFWKRLKI 154 >UniRef50_A9KM99 Peptide deformylase n=16 Tax=Bacteria RepID=DEF_CLOPH Length = 163 Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 92/135 (68%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 D L K +K +EEV +I ++DDM +TMY G+GLAA QV + +R++VIDVS +E Sbjct: 11 DSILNKTSKVIEEVTPKIDTLIDDMLDTMYDAGGVGLAAPQVGVLKRLVVIDVSLEGNEP 70 Query: 71 LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAIC 130 ++LINPE++ GE +EGCLS+P + +V R VK++A DR KPFE+E +GLLA Sbjct: 71 IILINPEIISTDGEQTGDEGCLSLPGKAGIVTRPNYVKVKAYDRHMKPFEVEGEGLLARA 130 Query: 131 IQHEMDHLVGKLFMD 145 HE+DHL G L+++ Sbjct: 131 FCHEIDHLDGILYVE 145 >UniRef50_C6BVK1 Peptide deformylase n=2 Tax=Desulfovibrio RepID=C6BVK1_DESAD Length = 170 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 3/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L +L P+E L++V VEEV E++ I+D+M ETMY ++G+GLAA QV + +R+IVID Sbjct: 3 LDILAYPEESLKEVCSRVEEVTPELKEIIDNMIETMYEDDGVGLAAPQVGVQKRLIVIDP 62 Query: 64 S--ENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 S + R + V+INPE++EKS + EE CLS P + ++ R E V + D +G Sbjct: 63 SGPKERTDLQVIINPEIVEKSSQKVDSEEACLSCPGFKCVIKRHETVTVTGTDPEGNDVR 122 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 +EAD LAI +QHE+DHL G L +D + LK+ +KV+K Sbjct: 123 IEADDFLAIVLQHEIDHLDGTLIVDRVGRLKRAMYDKKVKKW 164 >UniRef50_C1QBP9 Peptide deformylase n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBP9_9SPIR Length = 189 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/158 (44%), Positives = 109/158 (68%), Gaps = 6/158 (3%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE- 69 DERL++V++ +E+++ EI ++DDMFETMY E G+GLAA Q+ I +R+IVI V + DE Sbjct: 10 DERLQQVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGILKRLIVISVPDFDDET 69 Query: 70 ----RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 +L LINPE++ E I EEGCLS PE R V R +++K++ LD++G LEA+ Sbjct: 70 KPDFKLALINPEIIWHGEEKEILEEGCLSFPEIRDDVARYKEIKVKYLDKEGNEQILEAE 129 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 G +A +QHE+DH G F+D L +++R++++++ L Sbjct: 130 GYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKDL 167 >UniRef50_C4G2R8 Peptide deformylase n=6 Tax=Firmicutes RepID=C4G2R8_ABIDE Length = 175 Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 99/145 (68%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + + DE L K A+ ++E + +IQ ++DDM ETMY +G+GLAA QV + +R+ V Sbjct: 1 MALRNIRIVGDEILNKRAREIKENSDKIQTLIDDMLETMYDADGVGLAAPQVGVLKRLFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID SE+R+E V INPE+LE SGE EGCLS+P + +V R E VK++AL+R+ + + Sbjct: 61 IDCSEDRNEPFVFINPEILETSGEQTGSEGCLSVPGKAGIVTRPEYVKMKALNREFEEYI 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 +E +GL A + HE +HL G ++ + Sbjct: 121 IEGEGLFARAMVHENEHLDGHIYTE 145 >UniRef50_A4A7C9 Peptide deformylase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7C9_9GAMM Length = 169 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 100/156 (64%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L ++ +PDERLR+ ++ V + +Q+ V+D+FET+ IGL+A Q I +RIIV Sbjct: 1 MAILDIIEVPDERLREHSEAVSRFDEALQQQVNDLFETLGHSGAIGLSAPQTGIFKRIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + V ++ V INPE+L++S +EE CLS+P V R +VK+RA D GK E Sbjct: 61 VHVPDDDFGARVYINPEILKRSKSRYVEESCLSVPGIEGNVVRCIRVKLRAQDIHGKLCE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 + D L A+C+QHE+DHL G LF D LS K+ R+R Sbjct: 121 FDVDDLHAVCVQHEVDHLDGILFTDRLSWFKKLRLR 156 >UniRef50_A5CF65 Peptide deformylase n=18 Tax=cellular organisms RepID=DEF_ORITB Length = 181 Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 107/174 (61%), Gaps = 12/174 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ PD L+KV+ PV+ VN I++++DDM ETMY G+GLAA QV + +RIIV Sbjct: 1 MSILSLVTAPDPILKKVSSPVDTVNDSIRQLIDDMLETMYHNHGVGLAAPQVAVSKRIIV 60 Query: 61 IDVSE---------NRDER--LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 +D+S+ N + + L ++NP + S +T +EGCLS+P+Q V R +++ Sbjct: 61 LDLSKVDIEEDNITNSEYKYPLFMVNPIVKAISNQTVTAKEGCLSLPKQAIEVSRYHEIQ 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + LD K L A G LA IQHE+DHL G L +DYLS LK++ + K+ Sbjct: 121 VTYLDYYNKLKTLNAAGWLARAIQHEVDHLDGILLVDYLSNLKKEATLNTLSKI 174 >UniRef50_B3CMB1 Peptide deformylase n=11 Tax=Rickettsiales RepID=DEF_WOLPP Length = 179 Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 11/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS L ++ PDERL A V ++ +I+ +V+DMFETMY EG+GLAA QV + +RI + Sbjct: 1 MSKLPIVIAPDERLTTRASEVIDITDKIKELVNDMFETMYYAEGLGLAAVQVGVLKRIFI 60 Query: 61 IDVSENRDE----------RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKI 109 +DV + E + +INPE+ E SGE I +EGCLSIPEQ + R + + + Sbjct: 61 MDVQPEKAEDGPAGYESTGKFCMINPEITELSGEQVILKEGCLSIPEQSHEIKRPKYLTV 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + + + + L+A G LA CIQHE+DHL G L++ +LS LK +K +K+ R Sbjct: 121 KYKNLNNEEQTLKASGWLARCIQHELDHLNGILYVRHLSKLKYDMAMKKAQKVKR 175 >UniRef50_Q17XD4 Peptide deformylase n=60 Tax=Epsilonproteobacteria RepID=DEF_HELAH Length = 175 Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 112/169 (66%), Gaps = 5/169 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L+++H P + LR ++K V +A+ + +DDM ETM A EGIGLAA QV + R+++ Sbjct: 1 MALLEIIHYPSKILRTISKEVVSFDAKFHQQLDDMHETMIASEGIGLAAIQVGLPLRMLL 60 Query: 61 IDVS-----ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 I++ +++++ L +INP+ +E G +EGCLS+P V R EKVKI +R Sbjct: 61 INLPREDGVQHKEDCLEIINPKFIETKGSIMFKEGCLSVPGFYEEVERFEKVKIEYQNRF 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 K LEA LLA+ IQHE+DHL G LF+D LS LK+++ +++++L++ Sbjct: 121 AKVKVLEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELNK 169 >UniRef50_Q5GTG9 Peptide deformylase n=1 Tax=Wolbachia endosymbiont strain TRS of Brugia malayi RepID=DEF_WOLTR Length = 179 Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 11/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M L ++ PDERL A V +N +I+ +V+DMFETMY EG+GLAA Q+ + +RI V Sbjct: 1 MPKLSIVVAPDERLTTRASEVTGINDKIKELVNDMFETMYNAEGLGLAAVQIGVLKRIFV 60 Query: 61 ID----------VSENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKI 109 +D V + +INPE+ E S E I +EGCLSIPEQ + R + + + Sbjct: 61 MDIQLEDIKGEPVGYESTGKFCMINPEITELSDEQVILKEGCLSIPEQSHEIRRPKYLTV 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + D + K L+A G LA CIQHE+DHL G L++ +LS LK +K EK R Sbjct: 121 KYKDLNNKEQTLKASGWLARCIQHELDHLNGILYIRHLSKLKYDMAMKKAEKFKR 175 >UniRef50_Q0F0I6 Peptide deformylase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0I6_9PROT Length = 180 Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 107/177 (60%), Gaps = 15/177 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V ++L PD+RL +V++PVE ++ E++ ++ DM +TMY G+GLAA QV RI Sbjct: 1 MAVREILIHPDDRLVQVSRPVEFPLSDEVKELIRDMADTMYDAPGVGLAAPQVGELLRIA 60 Query: 60 VID-------VSENRD------ERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAE 105 V D V + D E V INPE L KS E EEGCLS+PE V R Sbjct: 61 VTDTVWRDKEVRHDGDLPGGHRELKVWINPEFLWKSDEMETWEEGCLSVPETWGDVSRPA 120 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 +++R D G E + DG A+ +QHE DHL GKLF+DYLSPLK++ I +K++KL Sbjct: 121 ALRLRWFDEHGVQHEQDFDGFQAVALQHEFDHLDGKLFIDYLSPLKRRMITKKMKKL 177 >UniRef50_O66847 Peptide deformylase n=3 Tax=Aquificaceae RepID=DEF_AQUAE Length = 169 Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/162 (42%), Positives = 102/162 (62%), Gaps = 5/162 (3%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE 69 P+E L+K + V+ ++ E++ ++ DMF+TMY EG+GLAA Q+ + ++VID S D Sbjct: 9 PNEILKKPTEKVDVIDKEVKNLIRDMFDTMYEAEGVGLAANQIGVPLSVMVIDTSPKEDA 68 Query: 70 ---RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGL 126 +LVLINPE+ E G+ +EGCLS P V R +KVK+ AL+ G+P EL +G Sbjct: 69 PPLKLVLINPEIKEGEGKIKYKEGCLSFPGLSVEVERFQKVKVNALNEHGEPVELTLEGF 128 Query: 127 LAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 AI QHE+DHL G F+D L +++ +K +KL LK+R Sbjct: 129 PAIVFQHELDHLKGITFVDRLKGWRRRMALEKYQKL--LKSR 168 >UniRef50_C8WW76 Peptide deformylase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW76_ALIAD Length = 167 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/144 (47%), Positives = 92/144 (63%), Gaps = 5/144 (3%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE- 69 D LR+ A+ V + I R++DDM ETMY +GIGLAA Q+ I +R++VIDV D Sbjct: 11 DPVLRQKAQVVTQFTPAIHRLLDDMAETMYDADGIGLAANQIGILKRLVVIDVQPKEDSF 70 Query: 70 ----RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 + L+NPE+LE+SG E CLS+P +V RA V++RA +R G+ FE+E Sbjct: 71 QKRAWIELVNPEILERSGVQREREACLSLPGLSGVVERAAYVRVRAQNRYGEFFEIEGRD 130 Query: 126 LLAICIQHEMDHLVGKLFMDYLSP 149 LLA C+QHE+DHL G LF DYL P Sbjct: 131 LLARCLQHEIDHLDGILFTDYLRP 154 >UniRef50_B3DUG9 Peptide deformylase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DEF_METI4 Length = 190 Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 109/181 (60%), Gaps = 16/181 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+++ + LRK P++ + ++R+V DM ETM +G+GLAA QV ++ ++ VID Sbjct: 2 ILKLVLYDNPILRKKGMPIDSFDDRLKRLVQDMLETMAYYKGVGLAAQQVGLNLQLAVID 61 Query: 63 VSENRDER----------------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEK 106 VS ++ L LINP L + EGCLS P R VPR+++ Sbjct: 62 VSGSKLSSSLLIGGKPAMVEEHMPLFLINPTLSYTQSKEISNEGCLSFPGLRIDVPRSKR 121 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 VK++ D +G+P+ EA G L++ IQHE DHL GKLF+DYLS +++ I++++EK+ R + Sbjct: 122 VKVKTFDLEGRPWYFEAGGFLSVAIQHEFDHLQGKLFIDYLSAEQKKAIKEELEKIKRGE 181 Query: 167 A 167 A Sbjct: 182 A 182 >UniRef50_C1A607 Peptide deformylase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A607_GEMAT Length = 196 Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/153 (47%), Positives = 101/153 (66%), Gaps = 3/153 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L + + LR+ + VE V E++R+VD+MF+TM A +G+GLAA QV +R+ V Sbjct: 1 MSLLDIHVLGSPVLRQETQRVESVTPELRRLVDNMFDTMEAAKGVGLAAPQVGRLERLAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D D RLV+INPE++ + G EEGCLSIPE A V R +V +RA D D +E Sbjct: 61 VDAD---DVRLVVINPEIILREGLERGEEGCLSIPEVYADVDRPARVIVRAQDIDLNWYE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 ++A LL C+QHE+DHL GKLF D LS LK++ Sbjct: 118 VDAANLLGRCLQHEIDHLFGKLFTDRLSLLKKR 150 >UniRef50_D2R5E8 Peptide deformylase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5E8_9PLAN Length = 222 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 92/147 (62%), Gaps = 2/147 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 LQ++ P LRKVAKP++ V+AE++ +V MF+ MY +GIGLAA QVD+ R+ VI++ Sbjct: 31 LQIITYPHPTLRKVAKPIKRVDAELRAMVAQMFDLMYEAKGIGLAANQVDLPLRLFVINL 90 Query: 64 S--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + + + E LV INP L G EEGCLS+P V R + V++ A + G+ Sbjct: 91 TAEKGKGEELVFINPVLSHPKGSAEAEEGCLSLPGVYGQVVRPKTVQVNAYNLQGQEISA 150 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLS 148 E GLLA CIQHE DHL G +F D +S Sbjct: 151 EVGGLLARCIQHENDHLDGVMFPDRMS 177 >UniRef50_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola RepID=Q73M64_TREDE Length = 169 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/165 (44%), Positives = 111/165 (67%), Gaps = 7/165 (4%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++VL++ +E LR+V+KPVE+++ I+ ++D+MF T+ E GIGLAA QV + R+ ++ + Sbjct: 1 MKVLYLGEETLREVSKPVEKIDENIKSLIDEMFVTVKKENGIGLAAPQVGENIRLFIVFI 60 Query: 64 SENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 +E ++ V INPE++E S E + EEGCLSIP+ V R VK++ L+ DGK +E Sbjct: 61 NE---QKYVFINPEIIETSQEMCLMEEGCLSIPKVYDEVMRPSAVKVQFLNIDGKIKTIE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 A GLLA IQHE DHL G LF+D LS +++ + +EK + KA Sbjct: 118 ASGLLARVIQHENDHLNGILFIDRLS---EEKKAEAIEKFEHKKA 159 >UniRef50_D0LH18 Peptide deformylase n=2 Tax=Nannocystineae RepID=D0LH18_HALO1 Length = 175 Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 107/166 (64%), Gaps = 5/166 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL ++ PD RLR+ + VE+V+ ++ + ++ +TMY+ G+G+AA Q+ ++ + Sbjct: 1 MAVLPIVVWPDARLRQETRRVEQVDDAVRDLYRNLVDTMYSLNGLGIAAVQIGDPTQMFI 60 Query: 61 IDVS----ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ++ + + DE + INPE++ S ++ EEGCLS P V R K ++RAL D Sbjct: 61 VEPALAGRDANDEPVAFINPEVVWTSEDSDKSEEGCLSFPGIYVQVDRPAKARVRALGID 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G+ FE+EA+GL A C+ HE DHL GKL +D++ PLK+Q IR+K+ + Sbjct: 121 GEIFEVEAEGLFARCLLHENDHLTGKLLVDFVGPLKRQMIRRKLNR 166 >UniRef50_B3QS23 Peptide deformylase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS23_CHLT3 Length = 202 Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 113/170 (66%), Gaps = 7/170 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L V + + L KVAKP++ V+AE+++ ++DMFETMY +GIGLAA QV R++V Sbjct: 19 MSILPVYTLGEPVLNKVAKPLKGVDAEMKQFIEDMFETMYNADGIGLAAPQVGKSLRLLV 78 Query: 61 IDVS---ENRDER-LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +DVS + +DE+ LV+INP++LE G + +EEGCLS+P V R +++ ++ D D Sbjct: 79 VDVSVMEDYQDEKPLVVINPQILETKGLSTMEEGCLSVPGVHEEVTRPKQITLKYRDADF 138 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 DG++A +QHE++HL G LF+D L K +R+ + E+LD +K Sbjct: 139 VERVEIYDGMMARVLQHEIEHLQGNLFIDNLDA-KTRRLHR--EELDAIK 185 >UniRef50_C0ZE47 Peptide deformylase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE47_BREBN Length = 175 Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/159 (41%), Positives = 102/159 (64%), Gaps = 4/159 (2%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRIIVIDVS 64 ++ + D LR+ +K V+ + ++++I+DDM +T+YA +G GL+A Q+ I +R++V+D Sbjct: 6 IVRLGDPILRETSKRVQSITPQVEKILDDMVQTIYAAKGRAGLSAIQIGIPKRLVVMDCG 65 Query: 65 ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E LINP L+EKSGE +E CLSIP +V RA VK++ L+R G+ +EA+ Sbjct: 66 SGLIE---LINPVLMEKSGEQVGQEACLSIPGVFGIVRRANYVKVQTLNRQGETKTIEAE 122 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 LA CIQHEMDHL G LF+D+ L + +K+ + D Sbjct: 123 DFLARCIQHEMDHLEGILFIDHTEELYSAKTGKKLNRKD 161 >UniRef50_B1GZ10 Peptide deformylase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=DEF_UNCTG Length = 168 Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/155 (42%), Positives = 90/155 (58%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++ D LRK A+ V E+N I+ + DM ETMY+ G+GLAA QV I R V Sbjct: 1 MAKLKIKKYGDPALRKRAEAVSEINEIIKELASDMLETMYSASGVGLAAPQVGILLRFCV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV N+ +V+INPE++ + EEGCLS P V R E + D +G E Sbjct: 61 IDVDPNKKSPIVMINPEIISGENKITAEEGCLSFPGFYGNVNRFENIIAGYTDLNGNRQE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 ++A LA +QHE+DHL KLF+DYL K++ I Sbjct: 121 IKAQNFLAKALQHEIDHLDAKLFIDYLPDWKRESI 155 >UniRef50_D0XQM3 Peptide deformylase n=2 Tax=Alphaproteobacteria RepID=D0XQM3_9CAUL Length = 220 Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 100/174 (57%), Gaps = 21/174 (12%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERL-- 71 L++V+KPV V+ ++ ++DDM +TMY GIGLAA Q+ QR++V+D+ + Sbjct: 44 LKQVSKPVAVVDDAVRALMDDMLDTMYDAPGIGLAAVQIGELQRVVVMDLGDGPAPEAAE 103 Query: 72 ------------------VLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRAL 112 +NPE++ S ET EEGCLSIPE V R +V++ L Sbjct: 104 AAAEDEEGSEETRVPNPRFFVNPEVIWASDETFCYEEGCLSIPEYFDQVERPARVRVAYL 163 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 DR G E E +GL A+C QHE+DHL G LF+D+LS L++ R KV+K RL+ Sbjct: 164 DRTGARIEGEIEGLYAVCFQHELDHLNGVLFIDHLSRLRRDRAMSKVKKTMRLR 217 >UniRef50_C0QI55 Peptide deformylase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DEF_DESAH Length = 174 Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 8/169 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ P L K A VE ++ + ++V+DM ETM+ G+GLAA QV +RIIV Sbjct: 1 MALLEIYQYPAAVLLKKALQVETIDDTVIKLVNDMGETMFEAPGVGLAAPQVGQSRRIIV 60 Query: 61 ID-------VSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRAL 112 + +E+ E LINPE++ SG E E CLS+P+ V R E V +R L Sbjct: 61 YNPQAGSSNANEDTKEFKALINPEIIASSGSIVSENEACLSVPDYSCNVKRFETVTVRGL 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 + +GK E +A GLLA+ +QHE+DHL G L++D +S LK+ ++KV K Sbjct: 121 NLEGKKLEFDAQGLLAVIMQHEIDHLDGILYIDRISTLKRNMYKKKVRK 169 >UniRef50_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychrophila RepID=DEF_DESPS Length = 169 Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 103/165 (62%), Gaps = 3/165 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ PD LRK + + ++ ++ +DM ETMY GIGLAA Q+ +++V Sbjct: 1 MAILKICTYPDPVLRKETVAITVFDEKLVKLTEDMAETMYDAPGIGLAAPQIGESLKLVV 60 Query: 61 IDVS---ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 + + +++ E +V+ NPE++EK EEGCLS+PE A+V R K+K+ D +G+ Sbjct: 61 VSTARREDSKQEYMVMANPEIVEKEESQVDEEGCLSVPELLAMVKRYRKIKVNYQDINGE 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 P + + A+ +QHE+DHL G LF+D+LS LK+ ++KV+K Sbjct: 121 PCSMTVEDRFAVVLQHEIDHLNGILFLDHLSSLKRNLYKKKVKKW 165 >UniRef50_Q1Q7Q2 Peptide deformylase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7Q2_9BACT Length = 170 Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 98/161 (60%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 + ++ P LR+ AKP+ E+NA++ + + M E M GIGLAA QV R+ VIDV Sbjct: 1 MNIVTYPAPVLRQKAKPLTEINADVYKKAEKMVELMRRVHGIGLAAPQVGWSVRLFVIDV 60 Query: 64 SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 N + V INP ++E++GET EEGCLS P V R K+K+ A + +G+ E+ Sbjct: 61 VGNNVDDNVFINPSIMEEAGETSNEEGCLSFPGIMGKVIRTHKIKVCAYNLNGQKIEVVL 120 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + LLA QHE+DHL G LF+D +SP + Q++++L++ Sbjct: 121 EDLLARAWQHELDHLNGCLFIDRMSPASRLAASQQLKELEQ 161 >UniRef50_A5D1C0 Peptide deformylase n=3 Tax=Clostridia RepID=DEF_PELTS Length = 155 Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 8/163 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +++ + D L++ AK V ++N I +++D+M ETMY G+GLAA Q+ + +R+IV Sbjct: 1 MAVYKIVELGDRILKERAKEVPKINQNIIKLLDNMAETMYHARGVGLAAPQIGVSKRVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +DV E E +INP + +G EGCLSIP V RA ++++ LDR GKP E Sbjct: 61 VDVGEGLLE---MINPVITSCAGHETDSEGCLSIPGIVGDVTRASVIEVKGLDRRGKPLE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 ++A G LA +QHE+DHL G LF++ K + IR+ V K D Sbjct: 118 VKAKGYLARALQHEIDHLDGILFIE-----KAKNIRKLVPKED 155 >UniRef50_A8U9S1 Peptide deformylase n=14 Tax=Lactobacillales RepID=A8U9S1_9LACT Length = 164 Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 1/145 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL +L PD L K V E+ EI ++++DM+ETM A +GIG+AA QV+ + R+ + Sbjct: 1 MSVLPILKYPDPMLITPTKEVTEITDEIVQLLEDMYETMVANDGIGIAAPQVNSNLRLAI 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ E +INP ++ +GET EGCLS PE + RA+ + +R DR+G FE Sbjct: 61 VEIDEESG-LYEMINPRIVHATGETIDVEGCLSFPEVFGTIKRADTIVLRYYDRNGDEFE 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 +EAD L+ QHE++HL GKLF D Sbjct: 120 VEADDYLSRAFQHELEHLDGKLFTD 144 >UniRef50_P94462 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF1_BACSU Length = 160 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 102/149 (68%), Gaps = 3/149 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V+ P E L A+ V + ++++++DDM++TM +G+GLAA Q+ I +R V Sbjct: 1 MAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +++ ++R R+ L+NPE+LEKSGE TGI EGCLS P V RA+ VK+RA +R GKPF Sbjct: 61 VEIGDDRG-RIDLVNPEILEKSGEQTGI-EGCLSFPNVYGDVTRADYVKVRAFNRQGKPF 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 LEA G LA +QHEMDHL G LF +S Sbjct: 119 ILEARGFLARAVQHEMDHLDGVLFTSKIS 147 >UniRef50_Q2S316 Peptide deformylase n=2 Tax=Rhodothermaceae RepID=DEF_SALRD Length = 195 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/149 (45%), Positives = 94/149 (63%), Gaps = 12/149 (8%) Query: 12 ERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE-- 69 E LR PV+E +Q ++D+M ETM+ GIGLAA QV +R+ V+D++ DE Sbjct: 11 EALRNETDPVQENTEALQELIDNMIETMHNAAGIGLAAPQVGRTERLFVVDLTPMADEIA 70 Query: 70 ---------RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +V INPE++E+S +T +EEGCLSIPE R V R E++++R DR+ + Sbjct: 71 EAGEPLPPQPMVFINPEIVEESEDTAEMEEGCLSIPEVREAVARPERIRMRYRDREFEEQ 130 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 ELEA G+L+ +QHE DHL G LF DYLS Sbjct: 131 ELEAGGMLSRVLQHERDHLDGVLFTDYLS 159 >UniRef50_D1C7I8 Peptide deformylase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7I8_SPHTD Length = 177 Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 6/151 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL++++ D RLR+ A + +V+ +++R+ DM ETMYA +G+GLA QV + +RIIV Sbjct: 1 MAVLKLVYEGDPRLRQKAVRIRKVDDDLRRLAADMLETMYAADGVGLAGPQVGVMRRIIV 60 Query: 61 IDVS---ENRDE---RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 I V EN D+ + LINPE++ SG EGCLSIP VPRA V ++A D Sbjct: 61 IGVPAGFENEDDPPIEMALINPEIVRASGRQVGPEGCLSIPNWYGEVPRAMHVTVKARDL 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 D + ++A G LA +QHE+DHL G LF D Sbjct: 121 DDREIRIKASGGLARILQHEIDHLDGILFTD 151 >UniRef50_C4ZEV9 Peptide deformylase n=9 Tax=Clostridia RepID=DEF_EUBR3 Length = 158 Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 86/135 (63%), Gaps = 3/135 (2%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 D L KV + V EV +I ++DDM ETMY G+GLAA QV I +RI+VIDV E Sbjct: 11 DPVLGKVCREVTEVTPKIVTLIDDMLETMYEANGVGLAAPQVGILKRIVVIDVGEGP--- 67 Query: 71 LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAIC 130 +V+INPE++E GE +EGCLS+P + V R VK R + D +E+E + LLA C Sbjct: 68 IVMINPEIIESDGEQTGDEGCLSVPGKAGQVTRPNYVKARFMGEDMNEYEIEGEELLARC 127 Query: 131 IQHEMDHLVGKLFMD 145 I HE+DHL G L+++ Sbjct: 128 ICHELDHLDGHLYVE 142 >UniRef50_B5EMH5 Peptide deformylase n=4 Tax=Proteobacteria RepID=B5EMH5_ACIF5 Length = 167 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 5/163 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+VL +L PD RL++ A PV + ++ +DD+ ETMYA G +G+AA QVD QRI+ Sbjct: 1 MAVLPILTYPDSRLQRKADPVSVFDDDLHHFIDDLTETMYAGPGGVGIAAPQVDRAQRIV 60 Query: 60 VIDV----SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ++DV ++ +VLINPEL G EGC+S+P+ V RAE+++++A D Sbjct: 61 IVDVRPKLGDDCHGLMVLINPELAAWEGMVVGREGCMSVPDFTGNVIRAERIQVQAQDVL 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 G+ E +G A +QHEMDHL G LF+D L K R+K Sbjct: 121 GRERSYECEGFEARAVQHEMDHLDGLLFLDRLVSRKVDLFRRK 163 >UniRef50_C6V4P2 Peptide deformylase n=1 Tax=Neorickettsia risticii str. Illinois RepID=C6V4P2_NEORI Length = 205 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 16/167 (9%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L+++ PD L KV+ V V+ E + +DDM ETMY GIGLAA QV + +RIIV Sbjct: 21 MALLKLVIEPDPILHKVSGNVVGVSDEKREFLDDMLETMYHYTGIGLAAVQVGVLERIIV 80 Query: 61 IDVSENRDER---------------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRA 104 +DV +++ L+NPE++E S +EGCLS+PEQ + R Sbjct: 81 VDVPPDKEWHSSPLNHVGYESSGGPYYLVNPEIIEFSRNLVSADEGCLSLPEQNYEIVRP 140 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 + V ++ L+ +G+ L+A+G LA CIQHE+DHL GKL++ +LS LK Sbjct: 141 DAVVVKYLNYNGEECLLKANGWLARCIQHEVDHLDGKLYVSHLSKLK 187 >UniRef50_C7CNZ7 Peptide deformylase n=24 Tax=Enterococcus RepID=C7CNZ7_ENTFA Length = 169 Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 V+H P+E L+ A+PV + EI ++++DM+ETM A +GIGLAA Q+ + ++ VI++ E Sbjct: 11 VIH-PNEHLKMKAQPVTIITDEIVQLLEDMYETMLAHDGIGLAAPQIGKNLQMAVIEIDE 69 Query: 66 NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 LINP ++EK G + EGCLSIPE V RA++V +R DR+G+ E+ A G Sbjct: 70 ESG-HFELINPVIIEKKGTSIDVEGCLSIPETYGTVERADEVTVRYFDREGEEMEVTAYG 128 Query: 126 LLAICIQHEMDHLVGKLFMD 145 LA QHE+DHL G+LF+D Sbjct: 129 YLARAFQHEIDHLNGELFID 148 >UniRef50_A6C970 Peptide deformylase n=2 Tax=Planctomycetaceae RepID=A6C970_9PLAN Length = 196 Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 96/158 (60%), Gaps = 3/158 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M LQ+++ P LR +KPV+ + E++ IV +MF+ MY GIGLAA QV + R+ V Sbjct: 1 MPALQIVNYPHPALRWKSKPVKSITPELRDIVRNMFDLMYEARGIGLAANQVALPYRLFV 60 Query: 61 IDVSENRDE---RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 I+++ + +E V INPE+ ++ G EEGCLS+P+ V R+E++ + A D +G+ Sbjct: 61 INLTSDPNEPEEEFVFINPEITKRKGTAEGEEGCLSLPQVYGDVKRSEEITVEAYDLNGQ 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 FE+ D L A +QHE DH+ G +F D + K+ I Sbjct: 121 LFEITLDDLAARAVQHEHDHIEGIMFPDRMVEAKRNEI 158 >UniRef50_C1DV92 Peptide deformylase n=4 Tax=Hydrogenothermaceae RepID=C1DV92_SULAA Length = 179 Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 100/158 (63%), Gaps = 9/158 (5%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS--ENR 67 PD+ L++ K ++ + ++ +D M+E MY EEG+GLAA Q+ I +I+VID S E + Sbjct: 9 PDKILKEPTKEIDFFDDRLKEYIDKMWEFMYKEEGVGLAANQIGIPYQILVIDTSIREKK 68 Query: 68 DE-------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +E ++VLINP+++EK G+ EGCLS P + +PR ++VK+ + G+ Sbjct: 69 NEEETEPPVKMVLINPKIVEKEGQVMSTEGCLSFPGVQITIPRYKRVKVVGKNEKGEDVV 128 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 +E+ L+I +QHE+DHL G F+ YLSPLK++ + K Sbjct: 129 VESSEFLSIVLQHEIDHLNGIPFISYLSPLKRKLVLDK 166 >UniRef50_A6Q676 Peptide deformylase n=5 Tax=Epsilonproteobacteria RepID=A6Q676_SULNB Length = 174 Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 9/168 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ PD+RL+++++ V + + ++DDM+ETM A G+GLAA QV + R ++I+ Sbjct: 2 VREIVIYPDKRLKQISREVGSFDGALHDLLDDMYETMIARNGVGLAAIQVGVDLRALIIN 61 Query: 63 VSENRDE---------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V ++E L +INP ++E G+ +EGCLS+P V RA+ VK+ D Sbjct: 62 VPLEKEEGEHDQPKENTLEMINPVIVEMDGKEKFQEGCLSVPGVYEDVERAKHVKVEYYD 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 R+G+ +E D LAI +QHE+DHL GK+F++ LS LK+++ ++ K Sbjct: 122 RNGEKHIIEDDDFLAIAMQHEIDHLDGKVFIEKLSFLKRKKFEKEWAK 169 >UniRef50_Q3ZXA9 Peptide deformylase n=5 Tax=Dehalococcoides RepID=DEF_DEHSC Length = 167 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 1/147 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +P+ LRK AK V ++ IQ ++DDM ETM + +G GLAA QV + R++V Sbjct: 1 MAIRRICELPEPVLRKKAKKVPSIDGSIQTLIDDMIETMNSADGAGLAAPQVGVSLRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + E VLINPE+++K G+ + EGCLSIP + RAE V + LDR GK Sbjct: 61 FREPDTK-EATVLINPEIVKKEGQRQVTEGCLSIPGYFGELTRAETVTAKGLDRHGKACR 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 ++ G++A ++HE +HL G L++D+L Sbjct: 120 IKGTGIVAQLLEHETEHLDGILYIDHL 146 >UniRef50_C9KJ27 Peptide deformylase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ27_9FIRM Length = 155 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/151 (43%), Positives = 95/151 (62%), Gaps = 3/151 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ L++V PVE+++ ++++++DDM TMY +G+GLAA QV R++V Sbjct: 1 MAILEIKKAGAPVLKEVCAPVEKIDKDLRKLLDDMAVTMYESDGVGLAAPQVGRPIRVVV 60 Query: 61 IDVSENRDERLV-LINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ID + D L+ LINP + + G EGCLS+P V RA KVK+ L+R GK Sbjct: 61 IDCQD--DHGLIELINPVITFREGTATDTEGCLSVPGIYGEVERAAKVKVEFLNRRGKKQ 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 L A GLLA CIQHE+DHL G+LF+D L Sbjct: 119 HLTATGLLARCIQHELDHLEGQLFIDIAKSL 149 >UniRef50_Q2GE16 Peptide deformylase n=8 Tax=Rickettsiales RepID=DEF_NEOSM Length = 186 Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 16/185 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L ++ PD L +V++ V ++ E + +DDM ETMY GIGLAA QV + +RIIV Sbjct: 1 MALLALIIEPDPLLHEVSEAVAGLSDEKRVFLDDMLETMYHCGGIGLAAVQVGVLERIIV 60 Query: 61 IDVSENRDER---------------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRA 104 +DV ++ +NPE++E S +EGCLS+PEQ + R Sbjct: 61 VDVPVGKEWHSSPLNHVGYKSSGGPYYFVNPEIIEFSQNLVPADEGCLSLPEQHYEIIRP 120 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + V ++ L+ DG+ L+A+G LA CIQHEMDHL G+L++ +LS LK +K ++ + Sbjct: 121 DAVVVKYLNYDGEECLLKANGWLARCIQHEMDHLNGRLYVSHLSKLKHDLAIKKAAEIKK 180 Query: 165 LKARA 169 + A Sbjct: 181 RHSEA 185 >UniRef50_A3DCX4 Peptide deformylase n=24 Tax=Clostridia RepID=DEF_CLOTH Length = 170 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/145 (46%), Positives = 94/145 (64%), Gaps = 3/145 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + DE LRKV+K V+ ++ I+ ++DDM ETMYA G+GLAA QV + +R++V Sbjct: 1 MAVRFIREDGDEILRKVSKKVDVIDERIKTLLDDMAETMYAANGVGLAAPQVGVLKRVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV + E LINPE++E+ GE EGCLSIP V R +V + AL+R+G+ Sbjct: 61 IDVGDGLME---LINPEIVEQEGEQIDIEGCLSIPGVAGEVKRPARVVVEALNREGEKIT 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 +E LLA+ + HE+DHL G LF D Sbjct: 118 VEGKELLAVALCHEIDHLDGILFTD 142 >UniRef50_A2BU25 Peptide deformylase n=50 Tax=cellular organisms RepID=DEF_PROM5 Length = 203 Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 97/149 (65%), Gaps = 5/149 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ + ++ LR AK + +V+ + + + DM ++MY+ +GIGLAA QV I + ++VID+ Sbjct: 31 LEIFKLGNDVLRTNAKRIGKVDLDTRNLAKDMLKSMYSAKGIGLAAPQVGISKELLVIDI 90 Query: 64 S--ENRDERLVLINPELLEKSGET--GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + ++ E L+LINPE+ G T EEGCLSIP V R +K+R D G+P Sbjct: 91 NFEDSAAEPLILINPEI-TAFGNTLNSYEEGCLSIPGVYLNVVRPSTIKLRFSDEMGRPR 149 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 ++ ADGLLA CIQHE+DHL G LF+D ++ Sbjct: 150 KMNADGLLARCIQHEVDHLRGVLFVDRVT 178 >UniRef50_A4WNU7 Peptide deformylase n=25 Tax=Rhodobacterales RepID=A4WNU7_RHOS5 Length = 167 Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 1/156 (0%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE 69 PD+RL+ A PV+ V EI I DDM ETM A G GLA Q+ + R+ V+D S++R + Sbjct: 9 PDKRLKTAAAPVDAVTDEIHAIWDDMVETMDAMPGYGLAGPQIGVMLRLAVVDCSDSRGK 68 Query: 70 RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLA 128 + L NPE+L SG+ EEG ++P A++ R V +R L+ G+ E + + A Sbjct: 69 AIRLANPEILHASGQFREHEEGSPNLPGATAVISRPRAVTVRFLNTAGEMEERDFVDIWA 128 Query: 129 ICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 +QH++DHL GKL++D+LS LK++ + K EK R Sbjct: 129 TSVQHQIDHLNGKLYIDHLSALKRKMVIAKSEKYLR 164 >UniRef50_Q1CVW8 Peptide deformylase n=2 Tax=Cystobacterineae RepID=Q1CVW8_MYXXD Length = 168 Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 2/159 (1%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE 69 P + L KPV + ++ +++ M E+M EGIG+AA QV R+ + V Sbjct: 9 PHKVLTSSTKPVTDFGPPLETLLEQMAESMKEAEGIGIAANQVGESLRVAL--VGREDGT 66 Query: 70 RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAI 129 ++NP++LEK +EEGCLS+P + PR KVK+R D+ + ELEA+G LA Sbjct: 67 FFEIVNPQILEKKEPVTMEEGCLSVPREWEKCPRFHKVKVRYQDKSAEWHELEAEGRLAH 126 Query: 130 CIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +QHE+DHL G +F+D+LS LK+ I +++KL ++KAR Sbjct: 127 VLQHEIDHLDGHVFVDHLSSLKRTLILDRMKKLQKVKAR 165 >UniRef50_D1BVC6 Peptide deformylase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVC6_XYLCX Length = 227 Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 101/165 (61%), Gaps = 6/165 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 VL++ I + L A+PV E+ E+ R++DDMF TM EG+GLAA QV + R+ V Sbjct: 33 VLRITEIGEPVLHTPARPVTELGTPELARLIDDMFTTMDVAEGVGLAAPQVGVDLRVFVY 92 Query: 62 DVSENRDERLV--LINPEL-LEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D++++ +R V ++NPEL L+ + +E EGCLS+P A + R IR +D+ G Sbjct: 93 DLTDDAGDRHVGAVVNPELELDLDADPEVEDEGCLSVPGAYAPLERPGGATIRGVDQLGG 152 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ-QRIRQKVEK 161 P +LEA G LA C HE HL G L+ D+L+P +Q +RQ+ EK Sbjct: 153 PVQLEATGYLARCFIHEAQHLDGTLYWDHLTPEQQADALRQRDEK 197 >UniRef50_D2NSH9 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothia mucilaginosa RepID=D2NSH9_9MICC Length = 214 Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 93/163 (57%), Gaps = 2/163 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + + D LR V P+ + ++ R++DDM ETMY G+GLA QV I ++I Sbjct: 17 MTILSIRTVGDPVLRSVCDPITVFDDDLARLIDDMLETMYDVGGVGLAGPQVGISKQIFT 76 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++R+ +INP L + EGCLS+P Q++ PR ++ +DR G+P Sbjct: 77 FGGIDDREG--YIINPVLEVGEEDQEGGEGCLSVPGQKSATPRKNWARVTGVDRHGEPLV 134 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 LE +GL A +QHE DHL GKLF+D L +QR+ + + D Sbjct: 135 LEGEGLFARMLQHETDHLHGKLFIDRLVGEDRQRVMRALRAAD 177 >UniRef50_B9MR36 Peptide deformylase n=97 Tax=Firmicutes RepID=DEF_ANATD Length = 166 Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 104/167 (62%), Gaps = 7/167 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ DE LRK +K VE+ + + +++DDM +TMY GIGLAA QV + +R +V Sbjct: 1 MALRKIRTYEDEILRKKSKVVEKFDQRLCQLLDDMKDTMYEANGIGLAAPQVGVLKRAVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+ E E L+NPE+ + G EGCLS+P V R +KV ++A DR G F Sbjct: 61 IDIGEGAIE---LVNPEIEQVEGSAVDVEGCLSVPNVWGEVERPQKVVVKAQDRFGNEFR 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD----YLSPLKQQRIRQKVEKLD 163 LEA+GLLA + HE+DHL G LF+D ++S + ++ R + +K+D Sbjct: 118 LEAEGLLARAVCHEIDHLDGILFVDKVIRFVSEEEIEQRRSRGDKMD 164 >UniRef50_A6DUA1 Peptide deformylase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUA1_9BACT Length = 197 Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 17/180 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V + LRKVA+P+ E+N EI+ +V++M +TMY E GIGLAA QV R+ VID Sbjct: 7 ILDVKKFGNPVLRKVAEPISEINDEIRELVEEMVDTMYEENGIGLAAPQVGRSLRVFVID 66 Query: 63 VSENRDER--------------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKV 107 + DE L LINPE++ SGE EEGCLSIP+ A V R + Sbjct: 67 -THFEDETYGSDGEKLLCPKMPLALINPEIISTSGEDISFEEGCLSIPQINAAVVRPSNI 125 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 ++A +G+ E + GL + C+QHE+DHL G LF D + + +K+E+L R+K Sbjct: 126 VLKAQTLEGEIIEADFGGLTSRCMQHEIDHLDGVLFTDKAEKDDLKLVAKKLEQL-RMKT 184 >UniRef50_UPI0001C165F0 Polypeptide deformylase n=1 Tax=Raphidiopsis brookii D9 RepID=UPI0001C165F0 Length = 218 Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 63/141 (44%), Positives = 98/141 (69%), Gaps = 3/141 (2%) Query: 8 HIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENR 67 ++ D LR+ AK + +++ E+++++ DM +TMY+E+GIGLAA QV ++++++VID + ++ Sbjct: 49 YLGDRVLRQPAKRITKIDDELRQLIRDMLQTMYSEDGIGLAAPQVGVNKQLVVIDCNPDK 108 Query: 68 DE--RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E LVLINP + + S E + +EGCLSIP+ V R + V+I D G+P L+AD Sbjct: 109 PEIPPLVLINPVIKQVSSELCVAQEGCLSIPKVFLEVKRPKIVEIAYKDEYGRPQTLKAD 168 Query: 125 GLLAICIQHEMDHLVGKLFMD 145 LLA CI HEMDHL G +F+D Sbjct: 169 NLLARCILHEMDHLNGVVFVD 189 >UniRef50_A0Q456 Peptide deformylase n=18 Tax=Francisella RepID=A0Q456_FRATN Length = 174 Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%) Query: 4 LQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L++L P L++VAK V +E+N +++ + +M E M G+GLAA QV I +R ++ Sbjct: 5 LEILKYPHPVLKEVAKEVTKDEINDDLRATIAEMHELMLEANGVGLAAIQVGIKKRFFIM 64 Query: 62 --DVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ E + + +INPE++E+SG+ EEGCLS P A V RA VKI+AL+ G Sbjct: 65 YDNLEEQNPKIITIINPEIIEQSGKIIDEEGCLSFPGVSAKVNRATTVKIKALNEFGDEI 124 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E+E DG LA CIQHE+DHL G F D+L LK++ I +K +KL + A++ Sbjct: 125 EIEKDGFLARCIQHEIDHLNGITFFDHLGSLKRKMIEKKYKKLMQENAKS 174 >UniRef50_C4Z519 Peptide deformylase n=9 Tax=Clostridiales RepID=C4Z519_EUBE2 Length = 171 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 96/146 (65%), Gaps = 5/146 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + + D+ LR AK + E+ I+ ++DDMF+TMY G+GLAA QV I +R++V Sbjct: 15 MAIRNIRTLGDDILRAKAKEITEMTPRIEELIDDMFDTMYEANGVGLAAPQVGIRKRLVV 74 Query: 61 IDVSENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ID D+ +VLINP +LE SG +TG+E GCLS+P + V R K++AL+ + + Sbjct: 75 IDCG---DDPIVLINPVVLETSGSQTGLE-GCLSVPGKTGEVTRPNYAKVKALNENMEEI 130 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 +E + LLA C+ HE+DHL G +++D Sbjct: 131 IVEGEELLARCLLHEIDHLDGIMYVD 156 >UniRef50_D2MKZ1 Formylmethionine deformylase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKZ1_9BACT Length = 160 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 88/141 (62%), Gaps = 5/141 (3%) Query: 17 VAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV-SENRDERLV 72 +A+PV+ + Q+ +DDMFETM A EGIGLAA QV +++IV+ ++ V Sbjct: 1 MAEPVDPAIIPSRAYQQFIDDMFETMDAYEGIGLAAPQVSRSEQLIVMRCDGQDAIPETV 60 Query: 73 LINPEL-LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICI 131 LINP + + + EGCLS+ R V R ++++ALDR+G+ + EA GL +CI Sbjct: 61 LINPRIVFYGPAQAEMWEGCLSVDGLRGKVTRPSSIRVQALDREGRSVDFEASGLFGVCI 120 Query: 132 QHEMDHLVGKLFMDYLSPLKQ 152 QHEMDHL+GKLF+D ++ L Sbjct: 121 QHEMDHLIGKLFLDRMTDLSS 141 >UniRef50_A6TRW8 Peptide deformylase n=4 Tax=Clostridiales RepID=DEF_ALKMQ Length = 147 Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 89/137 (64%), Gaps = 3/137 (2%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 D LRK ++ V+++++ I ++DDM ETMY +G+GLAA QV I +++IVIDV E E Sbjct: 11 DPVLRKKSRVVDKIDSRIHTLLDDMIETMYEADGVGLAAPQVGILKQVIVIDVGEGVIE- 69 Query: 71 LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAIC 130 LINPE+++++G EGCLS+P V R VK+R L+R GK E++ LLA Sbjct: 70 --LINPEIIKETGSQCDVEGCLSLPGHSGEVERPAIVKVRGLNRQGKMVEIQGTELLARA 127 Query: 131 IQHEMDHLVGKLFMDYL 147 + HE+DHL G LF D + Sbjct: 128 LCHEIDHLNGILFTDKI 144 >UniRef50_C7NGP0 Peptide deformylase n=2 Tax=Micrococcineae RepID=C7NGP0_KYTSD Length = 192 Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 12/172 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + I + L + K V EV EI+ +V DMF+TM A EG+GLAA QV + RI V Sbjct: 1 MAVRPITIIGHKALHQPTKKVREVTDEIRTLVADMFDTMEAAEGVGLAANQVGVRWRIFV 60 Query: 61 IDVSENR----DERLVLINPELLEKSGETGIE-------EGCLSIPEQRALVPRAEKVKI 109 D + + D R V++NP +LEK + + EGCLS+P + R++ ++ Sbjct: 61 YDCTHDPEAGPDARGVVVNP-VLEKEHVSPLSADPEADHEGCLSVPGESFPTARSDWARV 119 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D DG +E GLL C+QHE DHL G L+++ LSP ++R R +++ Sbjct: 120 TGTDLDGNAISVEGTGLLGRCLQHETDHLDGHLYVERLSPEDKRRARDAIKE 171 >UniRef50_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula baltica RepID=DEF_RHOBA Length = 201 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 2/144 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L ++H P LR V++P+ V+A+++ + D+M + MY +G+GLAA QVD+ R+ V + Sbjct: 3 LSIIHFPHPTLRHVSRPIVRVDAKLKSMADEMLDLMYEFDGVGLAANQVDLPIRMFVANP 62 Query: 64 SENRDE--RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + RDE V++NPE+ G +EGCLS+P V R + V++R D G Sbjct: 63 TGKRDEGESWVILNPEIDRPKGNDTAQEGCLSVPGLYGQVKRPKTVRLRGFDLQGNEINQ 122 Query: 122 EADGLLAICIQHEMDHLVGKLFMD 145 DG +A +QHE+DHL G +F D Sbjct: 123 VLDGFMARVVQHEVDHLDGIMFFD 146 >UniRef50_D1ATH4 Peptide deformylase n=1 Tax=Anaplasma centrale str. Israel RepID=D1ATH4_ANACI Length = 199 Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 107/181 (59%), Gaps = 20/181 (11%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 +SVL ++ +PD RL ++ V ++ +++ + +DM +TMY +GIGLAA QV +H+RI Sbjct: 12 VSVLPLVTLPDSRLSLCSEEVHADDFGQQLETLANDMLDTMYHNKGIGLAAVQVGVHKRI 71 Query: 59 IVIDVSENRDER-----------------LVLINPELLEKSGE-TGIEEGCLSIPEQRAL 100 V+D+ D V++NP ++E+S +EEGCLS+P+ R Sbjct: 72 FVVDLEYGSDRYEVPRDDGAGEFRATCGPTVVVNPVIVEESERLVAMEEGCLSVPDYRET 131 Query: 101 VPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 V R E + ++ +D + + ++A GLLA C+QHE+DHL G +F+ +S LK+ + +K+ Sbjct: 132 VRRPESIVVQYVDLNRRQKYIKACGLLARCLQHELDHLNGVVFLQRISKLKRDMVMEKIR 191 Query: 161 K 161 + Sbjct: 192 R 192 >UniRef50_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans RepID=Q7XYP8_BIGNA Length = 315 Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 6/149 (4%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L V+ PD RLR + + E +Q + D+MF+ MY ++G GLAA QV I+ R++V + Sbjct: 122 LNVIKYPDPRLRTENEKITEFGKPLQELADEMFDVMYDDDGCGLAAPQVGINYRLMVFNP 181 Query: 64 SENR---DERLVLINPELLEKSGE--TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +R D +VL NPE++ SGE EGCLS P R V R KV IRA D G+ Sbjct: 182 QGDRRKKDTEMVLANPEIIS-SGEEKDWFREGCLSFPGIRGQVERPTKVLIRAQDVKGED 240 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYL 147 E E +G A QHE DHL G LF D + Sbjct: 241 IEFELEGFTARVFQHEYDHLSGTLFHDRM 269 >UniRef50_A5ILS1 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_THEP1 Length = 164 Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 4/159 (2%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 D LRK AKPV + + +++ ++ M ETMY +G+GLAA QV I QR V+DV Sbjct: 9 DPVLRKRAKPVTKFDDNLEKTIERMIETMYHYDGVGLAAPQVGISQRFFVMDVGNGP--- 65 Query: 71 LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAI 129 + +INPE+LE ET + EEGCLS PE + R++++K+R + G+ E +G A Sbjct: 66 VAVINPEILEIDPETEVAEEGCLSFPEIFVEIERSKRIKVRYQNTKGEYVEEVLEGYAAR 125 Query: 130 CIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 QHE DHL G L +D +SP K+ +R+K+ + R R Sbjct: 126 VFQHEFDHLNGVLIIDRISPAKRLLLRKKLMDIARTVKR 164 >UniRef50_A7G6C0 Peptide deformylase n=14 Tax=Clostridium RepID=A7G6C0_CLOBH Length = 178 Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 90/145 (62%), Gaps = 1/145 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++L + D+ L++V+K VE ++ EI I+ D+ +T+YA GIGLAA Q+ +RI + Sbjct: 23 MAIREILQVGDKTLKRVSKKVECIDDEITGIIKDLKDTLYAGTGIGLAAPQIGYLKRIFI 82 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+ N E ++LINP+ +K G+ EEGCLS P +V R +V I L+ G+ Sbjct: 83 IDL-RNGQEPIILINPKFSKKIGKEESEEGCLSYPGYEGIVIRPRRVAITGLNEKGEEVT 141 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 EA GLL HE DHL G +++D Sbjct: 142 YEATGLLKNAFCHEYDHLDGIVYID 166 >UniRef50_Q1GDF5 Peptide deformylase n=18 Tax=Rhodobacterales RepID=Q1GDF5_SILST Length = 169 Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 4/151 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ PD RL PV ++ ++DD+ ETMYA G GLAA QV + +R+ V Sbjct: 1 MSLLPIVQWPDPRLSTACAPVGAAE-DLGTLIDDVLETMYAAPGRGLAAPQVGVLKRVFV 59 Query: 61 IDVSENRDER--LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +DV R +V+I PE+L +S +T + +E CLSIP + R K++IR D D Sbjct: 60 MDVDWKEGPRNPVVMIYPEVLWRSDDTTLAKEACLSIPGLSTRITRPTKIRIRWQDADRA 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 E DG A CIQHE DHL G++ D+ S Sbjct: 120 AQEQTFDGFAARCIQHEYDHLDGRVTFDHFS 150 >UniRef50_D1PY14 Peptide deformylase n=2 Tax=Prevotella RepID=D1PY14_9BACT Length = 187 Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 10/159 (6%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI-------DVSEN 66 LRKVA+ + + +++DDMFETM A G+GLAA Q+ R++VI D E Sbjct: 13 LRKVAQDIPTDYPGLSQLIDDMFETMDASSGVGLAAPQIGKSVRVVVINLDVLKEDYPEY 72 Query: 67 RDERLVLINPELLE---KSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 D R INP ++E KS + +EEGCLS+P V R +++++ LD + +P + Sbjct: 73 ADFRHAYINPHIIEVDKKSEKVSMEEGCLSVPGLSEKVVRYSRIRVQYLDEELQPHDEWV 132 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 +G LA +QHE DHL G +++D ++PL++Q IR K++ + Sbjct: 133 EGYLARVMQHEFDHLEGVMYVDRITPLRKQLIRNKLKGI 171 >UniRef50_B3E344 Peptide deformylase n=11 Tax=Bacteria RepID=B3E344_GEOLS Length = 169 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 8/166 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+V +L P L+K+A V ++ I +V D+ +TM A G +G+AA Q+ + R+ Sbjct: 1 MAVQPILKYPHPLLKKMAHRVAALDEPIHTLVQDLIDTMQAGPGSVGVAAPQIGVGLRVC 60 Query: 60 VIDVSENRDER------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V+DVS +R + L ++NPE++ +SG + EGC+S+P+ V RA ++ +R LD Sbjct: 61 VVDVSNSRHGKDNNHGLLCMVNPEIISRSGLAVMREGCMSVPDYTGDVERATEITVRFLD 120 Query: 114 -RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 R G+ E+ A G A+ IQHEMDHL G LF+D + + R+K Sbjct: 121 SRSGQQREVAASGFEAVAIQHEMDHLDGLLFLDRIISVSTGLFRRK 166 >UniRef50_Q3B2U9 Peptide deformylase n=11 Tax=Chlorobiaceae RepID=DEF_PELLD Length = 190 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 4/164 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + DE L + AKP++ V+A+I ++D MFE+M GIGLAA QV R++V+D Sbjct: 2 ILPINTYSDEVLHQKAKPLKGVDADISSLIDSMFESMENASGIGLAAPQVGCSIRLLVLD 61 Query: 63 VSENRDER----LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 VS + +V+INP +L G+ +EEGCLS+P + V R ++ ++ DR+ + Sbjct: 62 VSCMKSYEDVPPMVVINPNVLAVRGKNLMEEGCLSVPGVQGDVLRPSEITLKYRDRNFQE 121 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 E G+LA +QHE+DHL G LF+D + ++RI+Q+++ + Sbjct: 122 HTEEFSGMLARVLQHEIDHLNGTLFVDRMEKRDRRRIQQELDDI 165 >UniRef50_Q8NQ46 Peptide deformylase 1 n=8 Tax=Corynebacterium RepID=DEF1_CORGL Length = 169 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V D L A V + + + ++DDMF+TM G+GLAA QV + +R+ V Sbjct: 1 MAVREVRLFGDPVLVSRADEVVDFDESLSTLIDDMFDTMEDAGGVGLAANQVGVLRRVFV 60 Query: 61 IDVSENRDE-RLVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D S R +INP E L + +TG +EGCLSIP+ A R E V++ DRDG Sbjct: 61 FDTSHQEGGLRGHVINPVWEPLTEDTQTG-KEGCLSIPDVSAETTRYETVRLSGQDRDGN 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 P A+GLLA CIQHE DHL G LF+ L P +++ Sbjct: 120 PVGFVANGLLARCIQHETDHLDGVLFLKRLDPAERK 155 >UniRef50_D1VET6 Peptide deformylase n=1 Tax=Frankia sp. EuI1c RepID=D1VET6_9ACTO Length = 205 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 89/173 (51%), Gaps = 20/173 (11%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + + D LR A PV + ++R+VDDM ETMYA G+GLAA QV + R+ V Sbjct: 1 MTVLPIRVLGDPVLRTPAGPVTVFDDRLRRLVDDMIETMYAAPGVGLAAPQVGVGLRLFV 60 Query: 61 IDVS--ENRDER------------------LVLINPELLEKSGETGIEEGCLSIPEQRAL 100 D NR +R V+ NP L GE +EGCLSIP Sbjct: 61 FDTDWQPNRPDRHEDDAVPEAAGRARGRAPRVVANPVLELGPGEQNDQEGCLSIPGLHYA 120 Query: 101 VPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 RA +R +D G P E GLLA C+QHE DHL G L++D L+ L ++ Sbjct: 121 TARAAAATVRGVDAAGDPVEYAGTGLLARCLQHEADHLAGTLYVDRLTGLTRR 173 >UniRef50_D2N0L8 Peptide deformylase n=1 Tax=Campylobacter jejuni subsp. jejuni 414 RepID=D2N0L8_CAMJE Length = 676 Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ P+ +L ++ V + +AE+ ++DDM+ETM A G+GLAA QVD+ R+++++ Sbjct: 2 VRKIITYPNPKLFLSSETVNKFDAELHNLLDDMYETMIASNGVGLAAIQVDVPLRVLLVN 61 Query: 63 VSENRDER-----LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 + DE+ L +INPE++ E EGCLS+P+ V R V ++ DR G Sbjct: 62 IFNENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHVLLKYQDRFG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 + ELEA G LA+ IQHE DHL G LF++ +S K+ Sbjct: 122 EFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKR 157 >UniRef50_D1VSE6 Peptide deformylase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE6_9FIRM Length = 166 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LRK +K VE N ++ +VDDMFETM + +G+GLAA QV + +R+IV Sbjct: 1 MAIRNIRTDEDTILRKKSKTVENFNDRLKVLVDDMFETMDSADGVGLAAPQVGMLKRLIV 60 Query: 61 IDVSENRDE----RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +D +RDE R LINP + K G EGCLSIP ++ V RA + + DG Sbjct: 61 VD---DRDEENQHRFYLINPVITRKEGSEVCREGCLSIPGKQGDVKRATDIDVTYNTLDG 117 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 K ++ LA IQHE+DHL G L+ D K RI QK + L+ L Sbjct: 118 KEEKINCKDFLARIIQHEIDHLDGILYTDRAE--KMYRIVQKDDNLEEL 164 >UniRef50_C1ZAV5 Peptide deformylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAV5_PLALI Length = 199 Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 91/153 (59%), Gaps = 7/153 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 L+++ LR + PV E+N+E+++ + +MFE MYA +GIGLA+ QV I ++ +++ Sbjct: 5 ALEIVKYGHPALRHKSTPVTEINSELRKAIAEMFELMYAAKGIGLASNQVAIPRQFFILN 64 Query: 63 VSEN---RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ + +DE +V INP +L + EEGCLS P V RA +V I A D DG F Sbjct: 65 LTGDAAEKDEEVVFINPVILNRKSSCEGEEGCLSFPGLYGPVKRAGEVLIEAFDLDGNCF 124 Query: 120 EL----EADGLLAICIQHEMDHLVGKLFMDYLS 148 E+ + D L +QHE DHL G LF+D ++ Sbjct: 125 EMTLSAKEDDLAVRAVQHESDHLDGMLFIDRMT 157 >UniRef50_B9XGP3 Peptide deformylase n=1 Tax=bacterium Ellin514 RepID=B9XGP3_9BACT Length = 191 Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 18/182 (9%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+V+ LRK + V V +EI++ + DMFETMY GIGLAA QV +I VIDV Sbjct: 3 LKVIKYGHPVLRKKGEKVTRVTSEIKQFIKDMFETMYESRGIGLAAQQVARAVQITVIDV 62 Query: 64 SENRDER-----------------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEK 106 D LVLINPE+ + EGCLS PE A + R E Sbjct: 63 RGITDRPSTLELNGKPASVEKFMPLVLINPEVKPVGPKVAGTEGCLSFPEIFAEITRPET 122 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD-RL 165 V + A++ +G+ E A GLLA +QHE DHL G LF+D + +Q ++ ++E+L R Sbjct: 123 VDVVAMNENGERIEFRAGGLLARAVQHETDHLNGILFIDRMDTETKQELKPELEELQART 182 Query: 166 KA 167 KA Sbjct: 183 KA 184 >UniRef50_B0VID6 Peptide deformylase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VID6_9BACT Length = 186 Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 7/171 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V D+ LRK ++ + ++D+ TMYA +GIG+AA QV R+IVID Sbjct: 7 ILPVRLYGDDFLRKKLPEIDYNTPGLPEFIEDLIYTMYARDGIGIAANQVGSFYRMIVID 66 Query: 63 VSE----NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 + N+ +V+INP + K GE EEGC+S+P+ A V R++K+ DR G Sbjct: 67 PEQDNKLNKKSPIVMINPVIENKEGEVVYEEGCISLPDIFADVSRSKKITYSYTDRMGNR 126 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 A+ + A+ IQHE DHL G LF+D+L L + +I + KL +L+ARA Sbjct: 127 ITETAEEIKAVVIQHEFDHLEGILFIDHLGTLDRLKI---MHKLKKLQARA 174 >UniRef50_D1XJU9 Peptide deformylase n=5 Tax=Streptomyces RepID=D1XJU9_9ACTO Length = 219 Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 11/163 (6%) Query: 17 VAKPVEEVNA----EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLV 72 +++P +EV + + ++DDMF TMY +G GLAA QVD+ R+ V D +++ R V Sbjct: 48 LSRPCQEVTSFGSPGLAALIDDMFVTMYVADGAGLAANQVDVDLRLFVYDCPDDQGVRHV 107 Query: 73 --LINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGL 126 ++NP L + + EGCLS+P +PR ++ +R D+DG P +E G Sbjct: 108 GHIVNPVLDQPDPGSRRLVDDSEGCLSVPGASMTLPRTDRATVRGFDKDGNPLVIEGTGY 167 Query: 127 LAICIQHEMDHLVGKLFMDYLSPL-KQQRIRQKVEKLDRLKAR 168 A C+QHE DHLVG ++D LS ++ +RQ E+ + + AR Sbjct: 168 FARCLQHESDHLVGHTYLDRLSKRDRKDALRQMEERSEDVFAR 210 >UniRef50_Q92HU7 Peptide deformylase-like n=10 Tax=cellular organisms RepID=DEFL_RICCN Length = 183 Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 2/163 (1%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 Q+++ P++ +K A+ ++ V+ I+ IVD M + ++ E +GL A V I +RI V+D+ Sbjct: 9 QIVYAPNDIFKKQAEYIDIVDDNIRTIVDKMLQNLHIERAVGLGANMVGILKRIAVVDLH 68 Query: 65 EN-RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 EN + +V INP + S E EG LS P A + R++ +K++ LD +G EL Sbjct: 69 ENNKSSPIVFINPNITYFSEEKQTFIEGSLSFPGIEASITRSKAIKVKYLDYNGNKQELA 128 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 A+G LA IQHE+++L GK F+D LS LK+ + +K+ K +L Sbjct: 129 AEGFLATVIQHEIEYLNGKTFLDSLSKLKRDTLLKKMLKHIKL 171 >UniRef50_B9L0C1 Peptide deformylase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=DEF_THERP Length = 176 Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 6/151 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ D RLR+ A + V+ E++++ D+++T+ A G+GLAA Q+ + +RIIV Sbjct: 1 MAVRTIITEGDPRLRQKAIRIRVVDEEVRQLARDLWDTVRAARGLGLAAPQIGVLRRIIV 60 Query: 61 IDVSENRDER------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 + + + E L LINPE++ SG EGCLSIP VPR+ V ++ALD Sbjct: 61 VAIPPDYVEEGDPGVELTLINPEIVRASGRQVGLEGCLSIPGWYGEVPRSMHVTVKALDL 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 DG+ ++ GLLA +QHE+DHL G LF+D Sbjct: 121 DGREVRVKGSGLLARVLQHEIDHLEGILFVD 151 >UniRef50_A8LLB9 Peptide deformylase n=16 Tax=Rhodobacterales RepID=A8LLB9_DINSH Length = 168 Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 5/163 (3%) Query: 7 LHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIG----LAATQVDIHQRIIVID 62 L PD RLR A PV E+ EI+ + DDM +TM A G+G LAA Q+ + Q + V+D Sbjct: 6 LSWPDARLRTPAAPVAEITDEIRTVWDDMIDTMEAMPGMGPGAGLAAPQIGVMQALAVVD 65 Query: 63 VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 SE R + + NP++L S + EE ++P A + R V +R LD +G E Sbjct: 66 ASEERGRAIRMANPQVLHASAQLRSHEEASPNLPGVFAKIDRPRAVTVRFLDANGAVKEQ 125 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + GL A +QH++DHL G+++ D LS K+ + +K KL R Sbjct: 126 DFVGLWATSVQHQIDHLAGRMYFDRLSKTKRDMLLRKARKLAR 168 >UniRef50_A7GFN2 Peptide deformylase n=12 Tax=Clostridiales RepID=A7GFN2_CLOBL Length = 150 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 97/149 (65%), Gaps = 4/149 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMY-AEEGIGLAATQVDIHQRII 59 M++ Q+ + DE LRK +K VE V+ +I++I++DM +TMY E G GLAA QV I +R++ Sbjct: 1 MALRQIRLVDDEILRKESKVVEIVDDKIRQILNDMADTMYNTENGGGLAAPQVGILKRLV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID+ + + L+NP+++++ G + EGCLSIP + + R KV ++AL+ +G+ Sbjct: 61 VIDMGQGL---IKLVNPKIIKQEGTQEVIEGCLSIPNKFGKLIRPAKVTVQALNENGEEI 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 L G LA C HE+DHL G LF D ++ Sbjct: 118 ILTGTGDLAKCFCHEIDHLEGILFTDLVT 146 >UniRef50_D2NTP6 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothia mucilaginosa RepID=D2NTP6_9MICC Length = 248 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 10/157 (6%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRD---ER 70 L + A PV E N E++ +V DM+ETM A G+GLAA Q+ + RI + EN D R Sbjct: 72 LHRPAAPVTEFNDELKELVADMYETMDASNGVGLAAPQIGVGLRIFTYKM-ENEDGVPPR 130 Query: 71 LVLINPELLEKSGETGI------EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 +INP L T EEGCLS P + RAE V + LD G P EA Sbjct: 131 GCIINPVLTLGKISTADPDPYEEEEGCLSFPGYGFPLKRAEWVTVNGLDEHGNPVHFEAT 190 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G A C+QHE DHL GKL+++ L+ ++++ V+K Sbjct: 191 GWFARCMQHETDHLDGKLYVNRLNKKWTGKMKKVVKK 227 >UniRef50_B5YF46 Peptide deformylase n=2 Tax=Dictyoglomus RepID=DEF_DICT6 Length = 153 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 3/141 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 ++ + D L+ AK VE+++ +++ + DM ETM G+GLAA QV RIIV+D Sbjct: 4 EIRKVGDPILKTKAKKVEKIDEKVKELARDMIETMKFCNGVGLAAPQVGESLRIIVVDYE 63 Query: 65 ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 +N +VLINPE++E SGE EGCLS+P V RAE++ +A D DG+ + A Sbjct: 64 DNP---IVLINPEIIEMSGEELDYEGCLSVPGVEVPVKRAERIVFKAQDLDGRTKKYRAK 120 Query: 125 GLLAICIQHEMDHLVGKLFMD 145 GLLA +QHE+DHL G L +D Sbjct: 121 GLLARVVQHEVDHLDGMLILD 141 >UniRef50_Q826Q0 Peptide deformylase 2 n=20 Tax=Actinomycetales RepID=DEF2_STRAW Length = 186 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 6/156 (3%) Query: 20 PVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLV--LI 74 P EEV E+ R+V+DMF TMYA G+GLAA Q+ + R+ V D ++ D R V ++ Sbjct: 27 PCEEVTDHGPELARLVEDMFATMYAANGVGLAANQIGVPLRVFVYDCPDDEDVRHVGHVV 86 Query: 75 NPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQH 133 NP L+E G EGCLS+P A R ++ + DG+P + G A C+QH Sbjct: 87 NPRLIEADGVVLRGPEGCLSLPGLEAGTERYDRAVVEGFTTDGEPVRVLGTGWFARCLQH 146 Query: 134 EMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E DHL G +++D +S + +R+ ++ + + RA Sbjct: 147 ECDHLDGGVYVDRVSGWRHRRVMRQAARAPWNRQRA 182 >UniRef50_D1B5G7 Peptide deformylase n=3 Tax=Synergistaceae RepID=D1B5G7_THEAS Length = 168 Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 99/159 (62%), Gaps = 3/159 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 VL+V PD LR+ + V + E+ ++ DM+ TMYA++G+GLAA QV I + + VID Sbjct: 8 VLKVRVFPDPVLRQPVEEVRDFGEELSDLLADMWATMYAKDGVGLAAPQVGISKSLAVID 67 Query: 63 VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + +R V++NP++L + GE EEGCLS P V R ++++R D G E+E Sbjct: 68 ---HHGDRYVVVNPQILSQDGEEEGEEGCLSFPGIFVNVKRPSRIRLRFQDETGAVKEME 124 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G +A HE+DHL G+L +D++SP+++Q I+ ++ K Sbjct: 125 LQGFIARVFLHEIDHLRGRLLIDHVSPIRRQMIKTRLAK 163 >UniRef50_Q9XAQ2 Peptide deformylase 3 n=23 Tax=Actinomycetales RepID=DEF3_STRCO Length = 208 Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 7/167 (4%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +V +V + +E L + + V E ++ ++DDMF TMY EG GLAA QV + R+ V Sbjct: 25 AVRRVTEVGEEVLHRPCRDVTEFGPDLAALIDDMFRTMYVAEGAGLAANQVGVDLRLFVY 84 Query: 62 DVSENRDERLV--LINPEL--LEKSGETGIEEG--CLSIPEQRALVPRAEKVKIRALDRD 115 D ++ R V L+NP L L+ + ++EG CLS+P VPR ++ +R LD+D Sbjct: 85 DCPDDEGVRHVGHLVNPVLDALDPAARRLLDEGEGCLSVPGAVMAVPRPDRAVVRGLDKD 144 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL-KQQRIRQKVEK 161 G P +E G A C+ HE DH+ G +++D LS ++ +RQ ++ Sbjct: 145 GVPLLVEGTGYFARCLAHETDHVNGHVYLDRLSGRERKAALRQSADR 191 >UniRef50_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae TMO RepID=DEF_THELT Length = 171 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 5/150 (3%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 D LRK +K VE V+ ++ D+FETMYA +GIGLAA Q+ + RI V+D + R Sbjct: 10 DPVLRKKSKNVERVDETTISLIKDLFETMYATDGIGLAAPQIGVSLRIFVMDDGKPR--- 66 Query: 71 LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAI 129 V INPE++ KS E I EEGCLS+PE V R+++V +R ++ G+ E A Sbjct: 67 -VFINPEIIYKSEEKEIAEEGCLSVPEVFEDVERSKEVTVRYMNEHGEEVEESFVDYSAR 125 Query: 130 CIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 +QHE DHL G LF+D + ++ IR+K+ Sbjct: 126 VVQHEYDHLQGVLFIDLIPSSRRFAIRKKL 155 >UniRef50_A3EQF2 Peptide deformylase n=3 Tax=Leptospirillum RepID=A3EQF2_9BACT Length = 184 Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 20/183 (10%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++L++ + + LRK+A+P+ +E+ E Q VDDM ETM +G+GLAA QV + ++ Sbjct: 1 MALLKIAKMGNPILRKIAEPISPKEIETDEFQTFVDDMIETMRDSDGLGLAAPQVHVSKQ 60 Query: 58 IIVIDVSENRDER---------LVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEK 106 ++VI+ EN +R LVLINP + + K TG E GCLS+ R V R+ Sbjct: 61 VVVIESMEN--DRYPDAPPIPLLVLINPVFKYMSKETRTGWE-GCLSVDNLRGKVTRSRA 117 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 VK+ ALDR G LE + A+ +QHE DHL G LF+D +K ++E+ + Sbjct: 118 VKMEALDRHGNTITLEWEDFPAVVLQHETDHLRGHLFLDR---MKDMSTLTQLEEFQKFW 174 Query: 167 ARA 169 R Sbjct: 175 VRG 177 >UniRef50_Q1AVZ8 Peptide deformylase n=2 Tax=Bacteria RepID=Q1AVZ8_RUBXD Length = 164 Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/143 (44%), Positives = 84/143 (58%), Gaps = 4/143 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ D L+ A PV+ + + R+ ++MFETM EG+GLAA QV +RI V +V Sbjct: 3 LEMRTFGDPVLKSRAAPVKTFDGALARLAEEMFETMREHEGVGLAANQVGRLKRIFVAEV 62 Query: 64 SENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 D RLV++NP + E S T EEGCLSIP R V R V + + DG P +E Sbjct: 63 E---DRRLVVVNPAIEEASERTERAEEGCLSIPGVRVEVERPAAVVLTGQNLDGSPLRIE 119 Query: 123 ADGLLAICIQHEMDHLVGKLFMD 145 A+GLLA +QHE DHL G L +D Sbjct: 120 AEGLLARVLQHETDHLDGVLILD 142 >UniRef50_C8W757 Peptide deformylase n=2 Tax=Atopobium RepID=C8W757_ATOPD Length = 180 Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS--ENR 67 PD RL + + ++++N +++++ + M + MYA +G+GLA Q+ +R++VIDV + Sbjct: 12 PDPRLSQKCEEIDDINDDVRKMAEHMLKVMYATDGVGLAGPQIGYMKRMVVIDVDYPNGQ 71 Query: 68 DERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG- 125 + VLINPE+ GE + EEGCLS P V R V + A + DG EA+G Sbjct: 72 ENPFVLINPEIKVADGEPRVYEEGCLSFPGITVPVTRPSHVVVHAYNLDGDLMRYEAEGD 131 Query: 126 LLAICIQHEMDHLVGKLFMDYLSP-LKQQRIRQKVEKL 162 L A+C+QHE+DH+ G D+L P + + +R+ E L Sbjct: 132 LFAVCLQHEIDHINGVTMPDHLGPGARMETLREYKEAL 169 >UniRef50_C9RL37 Peptide deformylase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL37_FIBSS Length = 179 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 6/168 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + D LRK +P+ E+ E++++ DM ETMY G GLAA Q+ + R++V Sbjct: 1 MAILPIRIYGDPVLRKKCEPITEITPELRQLAKDMLETMYDAPGCGLAAPQIGKNIRLVV 60 Query: 61 IDVS---ENRDERLVLINPELLEKSGETGI--EEGCLSIPEQRALVPRAEKVKIRALDRD 115 ID + E ++ NPE + + +EGCLS+PE V R ++V +R D + Sbjct: 61 IDTAIPDEEEPRPYIMFNPEWEAEPDAKNVDYDEGCLSLPEIFCNVVRPDRVTVRFFDIN 120 Query: 116 GKPFEL-EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 G+ E+ +GL A CIQHE DHL G LF+D +S + + K+ K+ Sbjct: 121 GEAQEIHNCEGLFARCIQHECDHLNGDLFVDKISTSDRTMNQSKLRKM 168 >UniRef50_C8PRC6 Peptide deformylase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRC6_9SPIO Length = 173 Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 92/146 (63%), Gaps = 3/146 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++VL++ +E LR+ +KPVE ++ + ++ +MF TM + GIGLAA Q+ + R+ ++ + Sbjct: 1 MKVLYLGEETLRQPSKPVEHIDEALHELIREMFITMDEDNGIGLAAPQIGKNVRLFIVKI 60 Query: 64 SENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + + V INP ++ S + EEGCLSIP+ A V R E V ++ D +G+ +E Sbjct: 61 DDGIER--VFINPLIVGTSEKQCSYEEGCLSIPKMFADVVRPEAVTVQYQDMNGRRRTIE 118 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLS 148 A GLLA IQHE DHL G LF+D LS Sbjct: 119 ATGLLARVIQHEYDHLEGVLFIDRLS 144 >UniRef50_B2KD65 Peptide deformylase n=1 Tax=Elusimicrobium minutum Pei191 RepID=DEF_ELUMP Length = 176 Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 102/173 (58%), Gaps = 9/173 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVE--EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 M+V +++ ++ LR+ KPV+ + ++ I+ DM +T + +G GL+A Q+ + RI Sbjct: 1 MAVRRIVKYGEDILRQKLKPVDFKTLEPQLDAILQDMHDTCMSFQGAGLSANQIGLTHRI 60 Query: 59 IVIDVSEN-------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRA 111 +I + E + +R V+INP ++ K G EEGCLS+P + RAE + + Sbjct: 61 AMIFIPEKTPKGEAQKFKRYVVINPVIVSKKGCVTDEEGCLSLPGLWVEIERAESIVVHC 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 L+ G P E+ A G LA +QHE+DHL GK+F+D+ P + I+++++KL + Sbjct: 121 LNEKGLPVEIHAKGFLAKALQHEIDHLDGKIFIDHADPKLKPEIKKELKKLSK 173 >UniRef50_B7RJW6 Peptide deformylase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJW6_9RHOB Length = 159 Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL ++ PD RL +V +PVE + I +++ DMF+TMYA G GLAA QV +RI V Sbjct: 1 MSVLDIVIWPDARLTQVCQPVEGITPGITQLIADMFDTMYAAPGRGLAAPQVGRSERIFV 60 Query: 61 IDVS--ENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D + + +NPE+++ S G EEGCLSIP + RA +V +R D +G Sbjct: 61 FDAGWKDGAPTPVACVNPEIIDLSEGRLTGEEGCLSIPNTPMDIERAAQVTLRWTDPEGT 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMD 145 E G A+ +QHE DHL G + D Sbjct: 121 -HERTFTGAEAVIVQHEYDHLDGIVIYD 147 >UniRef50_A9DWU1 Peptide deformylase n=2 Tax=Rhodobacteraceae RepID=A9DWU1_9RHOB Length = 165 Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 5/151 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ +VL PD RL ++ P+EE+ EI+++ DM ETMYA G GLA QV R+ V Sbjct: 1 MSMREVLRWPDPRLAEICAPIEEITPEIEQLAADMLETMYAAPGRGLAGPQVGAMLRLFV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGI--EEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +D EN+ + LV INP + ++ GE + EGCLSIP + R +V++ +G Sbjct: 61 MDAGWKENKSDPLVCINP-MFQEIGEERVTNTEGCLSIPGISTDISRPSQVQMVWTGLNG 119 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 + +G A+ QHEMDHL G + D+L Sbjct: 120 GRYVQSFEGAAALIAQHEMDHLDGVVTFDHL 150 >UniRef50_B5J0U4 Peptide deformylase n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J0U4_9RHOB Length = 164 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 5/144 (3%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSEN--- 66 P L + P + ++ +++D+F+TMY +G LAA Q+ + +R+ V+DV+ Sbjct: 10 PHAVLTQTCAPASLNDPDLDGLIEDLFDTMYHAKGRVLAAPQIGVTKRVFVVDVTWKDGI 69 Query: 67 RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 RD R INP++ E +G+T ++E CLSIP+ V R E V++R +RDG DG Sbjct: 70 RDPR-AFINPQITETAGDTVFMDEQCLSIPDTPMPVARPEAVQLRWANRDGGLETAPFDG 128 Query: 126 LLAICIQHEMDHLVGKLFMDYLSP 149 +LA CIQHE+DHL G + D+ SP Sbjct: 129 ILARCIQHELDHLNGTVIFDHQSP 152 >UniRef50_D0WE84 Peptide deformylase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WE84_9ACTN Length = 187 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 4/145 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 L+VL PD LR+V + + + ++++ M +TMYA+ G GLAA QV + +R+IVID Sbjct: 10 TLEVLAYPDPTLRQVCEDCDPADKSLRKLARRMAKTMYADNGCGLAAPQVGVLKRLIVID 69 Query: 63 VSENRDER--LVLINPELLEKSGETGIEE-GCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ + + L+NP ++E G +EE GCLS+P + R +R D +G+ + Sbjct: 70 CDQDSGAKNPITLLNPTVIETRGPEVVEEEGCLSVPGITVPIRRPAYAIVRYTDLNGEDW 129 Query: 120 ELEADGLLAICIQHEMDHLVG-KLF 143 +E DGLLA C+QHE+DHL G LF Sbjct: 130 IIEGDGLLARCLQHEIDHLNGITLF 154 >UniRef50_B9S632 Polypeptide deformylase, putative n=2 Tax=fabids RepID=B9S632_RICCO Length = 282 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LR+ K ++ + ++++VD+MF+ MY +GIGL+A QV I+ +++V + Sbjct: 90 LKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP 149 Query: 64 SENRDE--RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 R E +VLINP L + S + EGCLS P A V R E VKI A D +G F Sbjct: 150 VGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFT 209 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + GL A QHE DHL G LF D ++ IR +++ L++ Sbjct: 210 VNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEK 253 >UniRef50_C0WD89 Peptide deformylase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD89_9FIRM Length = 164 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 1/154 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ + LR+ A+ V + ++++ + M E+MYA G GLAA Q+ + +R+IV Sbjct: 9 MSLLPIVKVGAPILREKAEAVTRFDKKLEKTLKAMAESMYANNGCGLAAPQIGLSKRMIV 68 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID + R +NP L E GE EGCLS+ + V RA +V +R DR G + Sbjct: 69 IDADDGAGIR-EFVNPVLSEFKGEEIDTEGCLSVDDYEGEVKRAAEVTVRFQDRKGGHWR 127 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 L A GLLA +QHE DHL G LF+D L +R Sbjct: 128 LTASGLLARALQHECDHLDGILFIDRALSLSPKR 161 >UniRef50_B3T9T4 Putative Polypeptide deformylase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9T4_9ZZZZ Length = 179 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 5/154 (3%) Query: 1 MSVLQVLHIPDE--RLRKVAKPVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++ + ++PD+ R + V+ +V + +QR++D+M E+M+ G+G+A+ QV R Sbjct: 1 MAIRPLRYLPDQLLRTKTVSLRARDVQSPAVQRLIDEMIESMHHYNGVGIASNQVGSRYR 60 Query: 58 IIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 I +I E VL+NP + + GE + EGCLS+P + + R+E+V + ALDR GK Sbjct: 61 ICIIQRPEEDAVPFVLVNPRITRREGEREVTEGCLSLPGYQGGIVRSERVWVTALDRQGK 120 Query: 118 PFELEAD-GLLAICIQHEMDHLVGKLFMDYL-SP 149 +L + GLLA ++HE DHL G F+D+L SP Sbjct: 121 QVQLRGETGLLAQALEHETDHLDGVAFIDHLRSP 154 >UniRef50_A6L9R8 Peptide deformylase n=8 Tax=Bacteroidales RepID=DEF_PARD8 Length = 185 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 97/164 (59%), Gaps = 8/164 (4%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID-------VSEN 66 LRK A+ V + +++++V +MFETMY +G+GLAA QV + R++VID E Sbjct: 13 LRKEAEDVPKDYPDLKQLVANMFETMYNADGVGLAAPQVGLSIRLVVIDGDVMGDDFPEC 72 Query: 67 RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 + + LINPE LE+S E +EEGCLS+P V R++ V++R D + + E +G Sbjct: 73 KGFKRALINPEFLERSEEEIAMEEGCLSLPGIHEKVSRSKTVRVRYWDENWEEHEEVVEG 132 Query: 126 LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 A +QHE +HL G +F+D +S +++Q + K+ + + R Sbjct: 133 FAARIVQHECEHLTGHVFIDNVSAIRRQLNKGKLNSIIKGTVRC 176 >UniRef50_C1MGI0 Peptide deformylase n=2 Tax=Viridiplantae RepID=C1MGI0_9CHLO Length = 210 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 95/162 (58%), Gaps = 3/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ P +LR K + +AE++++ D MF MY +G+GLAA QV ++ R++V + Sbjct: 37 LEIQKYPSAKLRDENKKIGVFDAELKKLADAMFAKMYESDGVGLAAPQVGVNYRLMVYNE 96 Query: 64 SENRDE--RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + +V++NP++++ S E + EEGCLS P A V R V I A + +GK F+ Sbjct: 97 AGERGKGAEVVMVNPKIVKFSKEKDMFEEGCLSFPAIYADVERPTAVTIEAQNVNGKKFK 156 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + DG A QHE DHL G LF D ++ ++R +++ L Sbjct: 157 MTLDGFQARVFQHEYDHLDGVLFHDRMAADVVAKVRAELDDL 198 >UniRef50_Q8REF0 Peptide deformylase n=15 Tax=Fusobacterium RepID=DEF_FUSNN Length = 174 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 11/172 (6%) Query: 3 VLQVLHIPDERLRKVAKPVE--EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 V ++ ++ L+++AK VE E+N E ++ +DDM ETMY +G+GLAA Q+ + +RI V Sbjct: 2 VYKIKKYGEDVLKQIAKEVELSEINDEFRQFLDDMVETMYETDGVGLAAPQIGVSKRIFV 61 Query: 61 IDVSENRDERLVL---INPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 D D VL INP ++ + ET EEGCLS+P V R ++V ++ L+ G Sbjct: 62 CD-----DGNGVLRKVINPIIVPLTEETQEFEEGCLSVPGIYKKVERPKRVLLKYLNEYG 116 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 K E A+ LA+ +QHE DHL G LF++ +SP+ ++ I +K+ + + R Sbjct: 117 KEVEEIAENFLAVVVQHENDHLDGILFIEKISPMAKRLIAKKLANIKKETKR 168 >UniRef50_Q88EA7 Peptide deformylase 2 n=45 Tax=Bacteria RepID=DEF2_PSEPK Length = 178 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 15/151 (9%) Query: 6 VLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + DERL ++A PV E +AE+Q+++DDMFETM G+GLAA QV I ++++ Sbjct: 5 ILKMGDERLLRIAPPVPEHMLGSAELQQLIDDMFETMRHVGGVGLAAPQVGIDLQLVIFG 64 Query: 63 VSENRDERL---------VLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRAL 112 R ER +L+NP + S E EGCLS+P R +VPR + + + + Sbjct: 65 F--ERSERYPDAEAVPQTILLNPVITPTSSEVEDGWEGCLSVPGLRGVVPRFKHICYQGI 122 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLF 143 D G P ADG A +QHE DHL+G+L+ Sbjct: 123 DPQGSPINRFADGFHARVVQHECDHLIGRLY 153 >UniRef50_Q8XJX0 Peptide deformylase 2 n=8 Tax=Clostridium perfringens RepID=DEF2_CLOPE Length = 155 Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 95/146 (65%), Gaps = 3/146 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +++ I E L+KV++PV++VN E++ ++ D+ +T+ EGIGLAA Q+ +++R++ Sbjct: 1 MAVKKIVQIGHEALKKVSEPVKDVN-EVKGLIQDLKDTLATVEGIGLAAPQIAVNKRVVY 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 I+ + +E VLINPE+ S ET + EGCLS LV R V+I+AL+ G+ Sbjct: 60 INFGDGENE-YVLINPEVTGVSKETYEDYEGCLSYVMHEGLVERPRAVRIQALNEKGELK 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 EA LLA C HE+DHL G +++D Sbjct: 119 VYEAQDLLARCFLHEIDHLEGIMYVD 144 >UniRef50_Q8PGV2 Peptide deformylase 1 n=12 Tax=Proteobacteria RepID=DEF1_XANAC Length = 171 Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 11/149 (7%) Query: 5 QVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQ--VDIHQRIIVI 61 +++ + D+RL +VA PV + +AE+ +V DMFETM A G+GLAA Q VD+ + Sbjct: 4 EIIRMGDKRLLRVAPPVTNLGSAELHTLVADMFETMDAARGVGLAAPQIAVDLQLMVFGF 63 Query: 62 DVSENRDE-----RLVLINPEL--LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 D SE E R L N ++ L + E G E GCLSIP RA++PR ++ R Sbjct: 64 DASERYPEAPAVPRTALANAQIEPLSEDMENGWE-GCLSIPGLRAVIPRYRFIRYRGFAP 122 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLF 143 DG P E +A+G A +QHE D+LVG+L+ Sbjct: 123 DGSPIERDAEGFHARVVQHEYDNLVGRLY 151 >UniRef50_B0RBE6 Peptide deformylase n=5 Tax=Actinobacteria (class) RepID=B0RBE6_CLAMS Length = 188 Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 8/156 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + D L A+ V+ + +++ +V DM+ETM G+GLAA QV + R+ V Sbjct: 1 MAVLPIRITGDPVLHAPARDVQAFDDDLRSLVADMYETMDEAPGVGLAAPQVGVPLRVFV 60 Query: 61 IDVSENRDE--RLVLINPELL------EKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 + E R V +NP+L ++ E EEGCLS P +R + RA++ +RA+ Sbjct: 61 YSYETDDGEPLRGVAVNPDLFITPVAVREADEDTEEEGCLSFPGERFPLVRADRAILRAV 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 D DG+P+E+EA G A +QHE DHL G L+ D L+ Sbjct: 121 DLDGRPYEIEAAGWFARILQHEYDHLDGLLYTDRLA 156 >UniRef50_A8Z5V9 Peptide deformylase n=3 Tax=Candidatus Sulcia muelleri RepID=DEF_SULMW Length = 189 Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L ++ + LRK +++ +I ++++M++TMY +GIGL+A Q+ + R+ +I+ Sbjct: 2 ILPIIIYGNSFLRKKCIEIDKSYKDINFLINNMYDTMYQAKGIGLSAPQIGLSIRLFIIE 61 Query: 63 VSENRDERL--VLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + ++ V INP +++K G I +EGCLSIP + R + I D + K + Sbjct: 62 YNNFLKQKFKKVFINPIIIKKYGYNLISKEGCLSIPNIIENIKRKNNIIIEYYDENWKKY 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 + +GLL+I IQHE DH+ GKLF+D + LK I++ Sbjct: 122 KQHFNGLLSIIIQHEYDHIEGKLFIDNIFILKNILIKKNFN 162 >UniRef50_Q83GH8 Peptide deformylase n=2 Tax=Tropheryma whipplei RepID=DEF_TROWT Length = 228 Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 26/172 (15%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 VLH P AKPV + + IQ IV DMF TM+A G+GLA Q+ + RI V +E Sbjct: 46 VLHAP-------AKPVTDFSG-IQEIVRDMFATMFAAPGVGLAGPQIGLGLRIFVYSYTE 97 Query: 66 NRD-ERLVLINPELL-------------EKSGETGIEE----GCLSIPEQRALVPRAEKV 107 + V INP+LL + + T +E GCLS P + + RA +V Sbjct: 98 GDTLHQGVAINPDLLIPKGVPKRQTNKQQANNSTSCDEPDREGCLSFPGYQFPLERAPQV 157 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 + A D + KPF + A G LA QHE DHL G L++D L+ +RQ V Sbjct: 158 TLSAFDENKKPFTVHATGWLARIFQHEFDHLQGTLYVDRLAQKYSGEVRQAV 209 >UniRef50_C7H120 Peptide deformylase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H120_9FIRM Length = 154 Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 90/152 (59%), Gaps = 2/152 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ QV DE LRK A+PV EV I+ ++ DM ETM+ E G+G+AA QV I +R+ + Sbjct: 1 MALRQVRKKGDELLRKKARPVGEVTDRIKLLLQDMEETMHKEGGVGIAAPQVGILKRMFI 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ + E +I+PE+++ SGE EEGCLS+P V R EK++++ DGK Sbjct: 61 MEPVQGSPE--YVIDPEIIKASGEQECEEGCLSVPGVVGTVIRPEKIEVKYTGLDGKERR 118 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 AI HE DHL G LF+D S +++ Sbjct: 119 RLLTEFEAIVFSHEFDHLEGVLFIDKASNIRK 150 >UniRef50_A3JYF4 Peptide deformylase n=1 Tax=Sagittula stellata E-37 RepID=A3JYF4_9RHOB Length = 165 Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 7/159 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L +L PD LR + PV +A + R+V+DMFETMYA G GLAA QV + R+ V Sbjct: 1 MSLLPILTWPDTGLRAASMPVRAPSA-VARLVEDMFETMYAAPGRGLAAPQVGVRSRLFV 59 Query: 61 IDVSENRDERL--VLINPELLEKSG--ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +D + E+ V INP + G E G EE CLS+P +V R ++++R D D Sbjct: 60 MDATWKDGEKTPTVCINPVVAPLDGPEEPG-EEACLSMPGVSVMVTRPTRIRLRYTDLDD 118 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 K E+ G A QHE DHL G + +L PL ++ + Sbjct: 119 KTHEVVLTGAAARIAQHETDHLDGVMHFQHL-PLAERGV 156 >UniRef50_D2PNQ8 Peptide deformylase n=2 Tax=Propionibacterineae RepID=D2PNQ8_9ACTO Length = 201 Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 10/169 (5%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 SVL + ++ + +V +PV + ++ ++V DM TM A EG+GLAA QV + ++ V Sbjct: 9 SVLPITRWGEDVMHRVNQPVTDFGDDLHKLVADMVATMNAAEGVGLAANQVGVDLQLFVF 68 Query: 62 DVSENRD---ERLVLINPELLEKSG-----ETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 D + RD + V+ NP+L G + G EEGCLS+P R + K+ +D Sbjct: 69 DCPD-RDGVRHQGVVCNPKLELPEGKDRHLDEG-EEGCLSLPGAFTKCARPDYAKVTGVD 126 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 G P E +GLLA C+QHE DH G +F D LS ++R+ + E+L Sbjct: 127 EHGNPVSYEGNGLLARCLQHETDHTQGMVFGDRLSRKYKKRLFAEAEEL 175 >UniRef50_B9ZK41 Peptide deformylase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZK41_9GAMM Length = 178 Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 14/161 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAE---IQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 MSV ++L + LR+V PV E + + + +VDD+ +TM+A EG+GLAA Q+ + R Sbjct: 1 MSVRRILRMGHPDLRRVCDPVPESDFDSPGLHALVDDLVDTMHASEGLGLAAAQIGVPHR 60 Query: 58 IIVIDVSENRDE--------RLVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEKV 107 + VI++ RL L+NP +L+ + + EGCLS+P R V R + Sbjct: 61 VAVIEIQPGNTRYPGAVPTGRLALVNPVVTVLDPTPQR-YWEGCLSVPGLRGEVARPRHI 119 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 + + DG P LE +G LA QHE+DHL G LF+D ++ Sbjct: 120 AVDYHEPDGTPRHLEPEGFLATVFQHEIDHLDGTLFIDRVT 160 >UniRef50_C8WHT7 Peptide deformylase n=3 Tax=Coriobacteriaceae RepID=C8WHT7_EGGLE Length = 183 Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 3/155 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 ++V+ ++ P+ L +V P + + ++++ M + MY +G GLAA Q+ + +R++V Sbjct: 2 LTVISIVQSPNPILNQVCDPCDLGDKSLKKLAKQMAKAMYKNDGCGLAAPQLGVAKRLVV 61 Query: 61 IDVSENRDER--LVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ID + E+ +VL+NP L++ G+ + EGCLS P + R ++R D DG+ Sbjct: 62 IDCDQEEGEQNPIVLVNPVLVDTQGDPVVAGEGCLSCPGITVPIARPPFARVRYFDLDGE 121 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 +E+E D LL C+QHE+DHL G + P+ + Sbjct: 122 EWEIEGDDLLGRCLQHELDHLDGITMFERCDPMAR 156 >UniRef50_A5FVG7 Peptide deformylase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVG7_ACICJ Length = 209 Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 13/155 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M++L++ + L A+PV + A EI R++ DM ET+ G+GLAA QV + R+ Sbjct: 26 MALLKLARLGHPVLFAKAEPVADPAAPEIARLLHDMAETLADAGGVGLAAPQVHVPLRLF 85 Query: 60 VIDVSENRDER---------LVLINPELLEKSGETGIE--EGCLSIPEQRALVPRAEKVK 108 + V E+R +INPEL+ GE +E EGCLSIP ALVPRA ++ Sbjct: 86 IYRVPESRAGGGEHDGPRGLSAVINPELVLHPGEP-VEDWEGCLSIPGMSALVPRAARLT 144 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLF 143 +RA+D G PF EA G A IQHE DHL G L+ Sbjct: 145 LRAIDATGAPFSREAAGFHARVIQHEADHLDGILY 179 >UniRef50_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UN70_AKKM8 Length = 182 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 17/177 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L++ + L++ +PVE + ++ + ++M ETMYA EGIGLAA QV I +++VID Sbjct: 2 LLEIAQYGNPVLKEKCRPVEHFDDSLKTLAENMLETMYAAEGIGLAAPQVSIPIQLVVID 61 Query: 63 VSE----------NRDER-------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAE 105 + + N +++ L+ NP L EGCLS+ + RA V R + Sbjct: 62 IPKEEESVTWLKVNGEDKELSDIMPLMFANPVLEPYGPMHPFHEGCLSVMKIRASVVRPD 121 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 VK L DG+ ++ +GLLA C+QHE DHL G LF++ +S ++ +R K+++L Sbjct: 122 FVKATVLLIDGREITIDCNGLLARCLQHECDHLNGILFVERVSSAQKITLRNKLKRL 178 >UniRef50_B5G8K4 Peptide deformylase n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8K4_9ACTO Length = 216 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 10/163 (6%) Query: 3 VLQVLHIPDERL-RKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L+V + +E L R+ A+ + R+V DMF TMY EG GLAA QV + R+ V Sbjct: 24 MLRVTEVGEEILARRCAEATVFGTPGLARLVADMFLTMYLAEGAGLAANQVGVDLRLFVY 83 Query: 62 DVSENRDERLV--LINPELLEK-SGETGIE--EGCLSIPEQRALVPRAEKVKIRALDRDG 116 D ++ R V ++N + E SG +E EGCLS+P R + RA++ +R +DRDG Sbjct: 84 DRFDDEGARHVGHVLNRVIDEAASGRALVEDVEGCLSVPGARHGLARADRTVLRGVDRDG 143 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 +P +E G A C+QHE DHL G +++D L +R R+ V Sbjct: 144 RPVTIEGTGYFARCLQHETDHLNGMVYVDRLG----KRARRAV 182 >UniRef50_C3PG26 Peptide deformylase n=7 Tax=Corynebacterium RepID=C3PG26_CORA7 Length = 169 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/152 (41%), Positives = 82/152 (53%), Gaps = 6/152 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V D L A+ + E ++R+ DM ETM G+GLAA Q+ + +RI V Sbjct: 1 MTVREVRLYGDPVLTTRAEEITEFGPSLERLAQDMLETMEDAGGVGLAANQIGVTKRIFV 60 Query: 61 IDVSENRDE-RLVLINPELLEKSGE---TGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 D S + R +INPE E GE G E GCLSIP R V++R D G Sbjct: 61 FDCSHFQHGLRGAVINPEW-EAVGEEMQLGTE-GCLSIPGISQPTERFSTVRLRGYDPQG 118 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 +P + A GL+A CIQHE DHL G LF+ LS Sbjct: 119 RPVSMLASGLMARCIQHETDHLDGVLFLQRLS 150 >UniRef50_A3EQQ7 Peptide deformylase n=2 Tax=Leptospirillum sp. Group II RepID=A3EQQ7_9BACT Length = 177 Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 4/173 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M +L D RL + V ++ E+ V MFE +Y GIG+AA QV + R V Sbjct: 1 MKPAGILSYGDPRLLIKSTEVTRIDQEMSDFVRGMFELLYRVPGIGIAAPQVGCNMRFFV 60 Query: 61 IDVSENRD----ERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 D++ D + +INP + K G EEGCLS P V RA +++I+ +D +G Sbjct: 61 FDMNRRADPGSRTPVTMINPVISAKEGAITQEEGCLSFPGIFVPVERALRIEIKGVDMEG 120 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 K LE +GL A IQHEMDHL G L ++++ + R+++++ ++++ + Sbjct: 121 KDLVLEGEGLFARLIQHEMDHLEGVLLSEHMTRWDKLRLQKEMRAIEKIGRKG 173 >UniRef50_B2V9A0 Peptide deformylase n=4 Tax=Hydrogenothermaceae RepID=B2V9A0_SULSY Length = 169 Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 11/170 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMY-AEEGIGLAATQVDIHQRII 59 M L++L PDERL++ + V + E + ++ + TMY + G+G+AA QV+ R I Sbjct: 1 MEKLEILKYPDERLKRKSIEVVDFGKEFKEFIEKLTYTMYNSPGGVGIAAPQVNNPIRTI 60 Query: 60 VIDVSENRDER-------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++D S++ + +VL NP+++ GE EGC+S+P+ V R +K+ A Sbjct: 61 IVDTSKSTHKTNKVSHGLMVLSNPKIVHAEGEIIFREGCMSVPDYTGNVKRFYYIKVEAQ 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMD-YLSPLKQQRIRQKVEK 161 D +G + +G A+ IQHE+DHL GK+F++ +SP + R+KV K Sbjct: 121 DINGNLITFDTEGFEAVVIQHEIDHLEGKVFIEKVVSP--KDIFRRKVYK 168 >UniRef50_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chloroflexi bacterium RepID=Q2Z018_9CHLR Length = 176 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 12/157 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ +++ PD LR+ A+ V + E+Q ++DDM ETM + G+GLAA QV ++I Sbjct: 1 MSIREIVFTPDPVLRRKARKVTDFGPELQTLIDDMVETMRSAPGVGLAAPQVAESWQVIT 60 Query: 61 IDVSENRDER-----------LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108 I+ SE +E L+NP++ S ET + EGCLS+P V R E V Sbjct: 61 IEYSEESEEGEEGEEKVPPKLYTLVNPQITRASNETIVGTEGCLSVPGIVGEVERNEAVT 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 ++A +R G+P ++A LA QHE+DHL G LF D Sbjct: 121 VKAQNRRGQPVTIKAQDWLARIFQHEIDHLEGVLFTD 157 >UniRef50_B2GGT8 Peptide deformylase n=8 Tax=Actinomycetales RepID=B2GGT8_KOCRD Length = 249 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L++ I D LR A+ V + + ++ +V DM ETMYA G+GLAA QV + +I Sbjct: 1 MSILRIRTIGDPVLRTPAQEVPQFDESLRTLVRDMVETMYAVGGVGLAAPQVGVGLQIFT 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + ++NP L EGCLS+P PR + + +D G+P Sbjct: 61 WGIEGDEGH---VVNPRLSVGHEPQDGGEGCLSVPGLSYETPRMDSATLTGVDMHGRPVH 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +A GLLA C QHE DHL G L++D L Sbjct: 118 RDATGLLARCFQHETDHLRGTLYVDRL 144 >UniRef50_B4DC77 Peptide deformylase n=2 Tax=Verrucomicrobia RepID=B4DC77_9BACT Length = 187 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 19/180 (10%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+++ + LR+ + V++V+ +I+++ DM ETM A G+GLAA Q+ + ++ VID Sbjct: 2 ILEIVKYGNPVLREKGREVKDVDEKIKQLSVDMLETMRAANGVGLAAQQIGVPIQMTVID 61 Query: 63 VS--ENRDER---------------LVLINPEL-LEKSGETGIEEGCLSIPEQRALVPRA 104 V+ E+R LVL+NP L + E+G EGCLS P+ A + R+ Sbjct: 62 VAGIEDRPSAMWINDKEVPIEEHMPLVLLNPVLKFSEEKESG-NEGCLSFPDITAEITRS 120 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 V+ A DGK E EA GLLA +QHE DHL G LF+D ++ + I K+++L + Sbjct: 121 SGVQCTATLLDGKKIEFEAAGLLARALQHETDHLHGVLFIDRMNAATKAGISGKLKRLQK 180 >UniRef50_Q0SDG2 Peptide deformylase n=2 Tax=Actinomycetales RepID=Q0SDG2_RHOSR Length = 188 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 8/168 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L D RL A V ++E+ VDD+ ET A G GLAA QV + I V Sbjct: 1 MAIRPILIAGDTRLTTPAVTVTAFDSELAAFVDDLHETNTAAHGAGLAANQVGDPRAIFV 60 Query: 61 ID-VSENRDERLVLINPELLEKSG--ETGIE----EGCLSIPEQRALVPRAEKVKIRALD 113 D + + R R +INP +LE S ET + EGCLS+P +R RA+ ++ +D Sbjct: 61 YDLIDDARRHRGHVINP-VLETSPRPETMPDPDDLEGCLSVPGERYPTGRADWARVVGVD 119 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D KP +E G LA C+QHE DHL G L++D L + R+ +++ Sbjct: 120 VDNKPISVEGTGYLARCLQHETDHLAGHLYLDRLIGRNHRAARKMIKQ 167 >UniRef50_B5Y7H9 Peptide deformylase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7H9_COPPD Length = 171 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 8/144 (5%) Query: 9 IPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE--GIGLAATQVDIHQRIIVIDVSEN 66 IPD+ LR A+ V+ E +RIV+DMF M E G+GLAA QV I +R +VID+ E Sbjct: 6 IPDKMLRAKAQKVKSFTEEDRRIVEDMFRLMKENEVEGVGLAAPQVGISKRFVVIDLDEF 65 Query: 67 RDERLVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 + VLINP E L K E IE GCLS+P V R +K+K+ + G+ L+ D Sbjct: 66 HE---VLINPRWEPLGKEKEEDIE-GCLSVPGVYGPVERFKKIKVSFTNLYGEKITLKLD 121 Query: 125 GLLAICIQHEMDHLVGKLFMDYLS 148 G+L+ +QHE+DHL G LF+D ++ Sbjct: 122 GMLSRVVQHEVDHLDGVLFIDKIT 145 >UniRef50_C2D8V2 Peptide deformylase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8V2_9ACTN Length = 187 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 11/162 (6%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE 69 P L+ V +PV+E+ EI+ + MFE MYA +G GLAA Q+ + R++VID Sbjct: 18 PSVILQTVCEPVKEITQEIKDLAHHMFEVMYATDGCGLAAPQIGKNIRLVVIDCEWGEGS 77 Query: 70 R---LVLINPEL-LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 R VL+NP++ + + + EGCLS P V R V AL+ DG EA G Sbjct: 78 RKKPYVLVNPKIVVADEADRSMSEGCLSYPGILVPVKRPSHVICEALNLDGDLIRYEARG 137 Query: 126 -LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 LLA C+QHE DHL G D+L + +K+EKL+ K Sbjct: 138 NLLAACLQHECDHLQGVTIPDHLP------LHKKMEKLEEYK 173 >UniRef50_D1CBE7 Peptide deformylase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBE7_THET1 Length = 203 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 112/184 (60%), Gaps = 22/184 (11%) Query: 1 MSVLQVLHI--PDER--LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V ++L + PD+ LRK + PV + ++E++++V+DM ETM +G+GL+A QV + Sbjct: 1 MAVRRILQMENPDDLSVLRKRSSPVTKFDSELRKLVEDMIETMREADGVGLSAVQVGDLR 60 Query: 57 RIIVIDVSENRDER-------------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVP 102 R++V+++ ++ V+INPE+ + S + ++EGCLS+P + A VP Sbjct: 61 RVVVMEMPGKYEQDEDGNQIEVSPPKLYVMINPEITKVSHDRIPMQEGCLSLPGRYAEVP 120 Query: 103 RAEKVKIRALDRDGKPFELEAD-GLLAICIQHEMDHLVGKLFMDYL---SPLKQQRIRQK 158 RA V++R D +GK +L A+ LL+ CIQHE+DHL G LF + + S + +R +QK Sbjct: 121 RAPWVEVRYKDLNGKEHKLLAEEQLLSQCIQHEVDHLDGILFTERIVDWSTFRDERQKQK 180 Query: 159 VEKL 162 + Sbjct: 181 KSRF 184 >UniRef50_B3ETT4 Peptide deformylase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=DEF_AMOA5 Length = 188 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 11/159 (6%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS--------E 65 LR+ A P+E + +++ +++ MF TM A +G+GLAA Q+ ++ V+DVS + Sbjct: 13 LRQTAAPIE-LGTDLETLIESMFITMNAAKGLGLAAPQIGKSIQLFVVDVSPFVGDGMVQ 71 Query: 66 NRDERLVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 R V INP E+ + + T EEGCLSIP VPR ++V+I+ DR+ + E + Sbjct: 72 PDKHRKVYINPVLEIYQPNTITHYEEGCLSIPGIYVDVPRNKRVRIKFFDRNWQAQEEDL 131 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + A +QHE DHL GKL +DYL ++ R++ K+E + Sbjct: 132 VDMPARVVQHEYDHLYGKLHIDYLRADRRLRLKSKLENI 170 >UniRef50_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38FB Length = 184 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ P LR AKPV ++A++Q+ M E MY EG+GLAA QV + ++IV++ Sbjct: 1 MKIVRYPHPALRAKAKPVIAIDADVQKAAAQMVELMYRSEGLGLAAPQVTLDYQMIVLNP 60 Query: 64 ---SENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ D+ +V INP ++E G T EGCLS P V R + V ++ + G+ Sbjct: 61 LGEADQPDQEVVAINPVIVEAKGSTINDREGCLSFPGLYQNVRRYKTVTVKFYNLKGELV 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + A L A QHE+DHL G LF+D + L R ++ +EK Sbjct: 121 QTTAHDLAARVWQHEIDHLQGTLFIDKMGSLGLSRSQKDLEKF 163 >UniRef50_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMG4_9BACT Length = 164 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 85/146 (58%), Gaps = 3/146 (2%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE 69 PD LR+ K +E + + +++M MY +G+GLAA QV ++ VI + Sbjct: 10 PDPVLREPTKEIERFDDNFKSFLEEMESLMYEYDGVGLAAPQVGESLKVAVI---AYEGK 66 Query: 70 RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAI 129 VLINP +++ G +EGCLS P V R V + A D +G+P+ +EA+G LA Sbjct: 67 LHVLINPRIVDYDGRQVDQEGCLSFPGIFEDVARPASVVVEAQDENGEPYSIEAEGFLAR 126 Query: 130 CIQHEMDHLVGKLFMDYLSPLKQQRI 155 + HE+DHL GKL +D+LSP+K++ + Sbjct: 127 AMCHEIDHLNGKLMIDHLSPMKREMV 152 >UniRef50_Q6NH22 Peptide deformylase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NH22_CORDI Length = 169 Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 6/165 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D L + VE ++ I+ +V+DM ETM A G+GLAA QV + +R+ V Sbjct: 1 MAIRDIRLFGDPVLTTKSSDVEVFDSSIRNLVNDMLETMDAAGGVGLAANQVGVTKRVFV 60 Query: 61 IDVSENRDE-RLVLINPELLEKSGETGIE---EGCLSIPEQRALVPRAEKVKIRALDRDG 116 D S D R +INP + E GE I+ EGCLSIP+ + R V + D DG Sbjct: 61 YDCSHIEDGLRGHIINP-VWEPIGED-IQIGPEGCLSIPDVQEETERWMTVSVSGRDVDG 118 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 P L A GL+A CIQHE DHL G LF+ L + ++ ++ K Sbjct: 119 NPISLVASGLMARCIQHETDHLDGVLFLRKLDKVHRKDAMAQIRK 163 >UniRef50_P73441 Peptide deformylase n=10 Tax=Cyanobacteria RepID=DEF_SYNY3 Length = 187 Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 3/145 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ ++ D+ LR+ AK + +V+ I+++ +M +TMY+ GIGLAA QV I+++++V+D Sbjct: 17 LELHYLGDKVLRQPAKRIAKVDDSIRKLAKEMLQTMYSANGIGLAAPQVGINKQLLVVDC 76 Query: 64 SENRDER--LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ + L++INP++ S E +EEGCLS+P V R +++ D G+P + Sbjct: 77 EQDKPDEPPLIMINPQITRTSEELCVVEEGCLSVPNVYMDVTRPRAIEVTYKDEHGRPQK 136 Query: 121 LEADGLLAICIQHEMDHLVGKLFMD 145 L A IQHEMDHL G +F+D Sbjct: 137 RLFAELTARVIQHEMDHLNGVMFVD 161 >UniRef50_B2S3Z6 Peptide deformylase n=2 Tax=Treponema pallidum RepID=DEF_TREPS Length = 162 Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 4/133 (3%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVL 73 L V++PV EV+ +++ + MF M G+GLAA QV R+ V+DV + Sbjct: 11 LTTVSEPVSEVDEQLRAFISGMFRVMRGAGGVGLAAPQVGRTVRVFVVDVEHHVR---AF 67 Query: 74 INPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQ 132 INP++ S E + EEGCLSIP V R +V ++ LD +GK ++ADG+LA IQ Sbjct: 68 INPQITAASEEQSSYEEGCLSIPHIYERVLRPRRVSVQYLDENGKRCAVDADGILARVIQ 127 Query: 133 HEMDHLVGKLFMD 145 HE DHL G LF+D Sbjct: 128 HEYDHLDGILFLD 140 >UniRef50_B9Z3A2 Peptide deformylase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z3A2_9NEIS Length = 170 Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 13/147 (8%) Query: 14 LRKVAKPVEEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSEN-RDE-- 69 LR+ A V E + + +V DMF+T YA G+GLAA Q+ + R+IV RD Sbjct: 13 LRQHAAAVTEFDTPALHELVQDMFDTQYAGNGVGLAAPQIGVPLRVIVFAYGGGERDPGA 72 Query: 70 ----RLVLINPELLEKSGETGIEE---GCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 VLINPE+ + IEE GC S+P QR VPR + ++ RA D G+ E Sbjct: 73 PAIPPTVLINPEI--RPDAEHIEEDWEGCFSVPGQRGRVPRWQAIRYRAQDIQGRLVEGR 130 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSP 149 A+G A IQHE+DHL G LF+D+L P Sbjct: 131 AEGFHARIIQHEVDHLNGTLFIDHLPP 157 >UniRef50_A3ST83 Peptide deformylase n=2 Tax=Sulfitobacter RepID=A3ST83_9RHOB Length = 145 Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 1/140 (0%) Query: 23 EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKS 82 E+N EI+ + DDM +TM A G+GLAA Q+ + ++ V+D S+ RD+R+ L NP +++ S Sbjct: 3 EINDEIRALWDDMIDTMDAMPGVGLAAPQIGVSLQVAVVDASQARDKRIRLANPVVIDAS 62 Query: 83 GETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGK 141 EE ++P A + R VK+R LD G + GL A +QH++DHL GK Sbjct: 63 AIMNEYEEASPNLPGISAKIRRPRGVKVRYLDEQGATVTRDFVGLEATSVQHQIDHLAGK 122 Query: 142 LFMDYLSPLKQQRIRQKVEK 161 +F+D LS ++ + +K K Sbjct: 123 MFVDNLSKTRRDMLLRKARK 142 >UniRef50_B8HH62 Peptide deformylase n=11 Tax=Actinobacteridae RepID=B8HH62_ARTCA Length = 204 Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 83/151 (54%), Gaps = 10/151 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + I D LR VA PV E E+ ++V DM ETM +G GLAA Q+ + +R+ Sbjct: 1 MAILNIRIIGDPVLRTVADPVTEFGPELAKLVADMTETMEDVDGAGLAAPQIGVSKRVFT 60 Query: 61 --IDVSENRDERLVLINPELLEKSGETGIE--EGCLSIPEQRALVPRAEKVKIRALDRDG 116 ID E +INP +LE S + + EGCLSIP V R ++ +D G Sbjct: 61 YRIDGVEGH-----IINP-VLENSDDYQPDHVEGCLSIPGLGFPVRRFRATRVTGVDMHG 114 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 P LE +G+LA C QHE DHL G L+ D L Sbjct: 115 NPVSLEGEGMLARCFQHENDHLDGVLYTDRL 145 >UniRef50_D0U631 Peptide deformylase n=2 Tax=uncultured actinobacterium RepID=D0U631_9ACTN Length = 180 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 3/139 (2%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 D L +A + ++ ++ + +DMF MY G+GLA Q+ + ++I V DV D+ Sbjct: 17 DPVLAAMADEITNIDGKLVTLAEDMFRVMYQAPGLGLAGPQIGVQKQIFVYDVD---DDP 73 Query: 71 LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAIC 130 V+INP+++E SGE +EGCLSIP + R +KV + +G ++EAD LLA Sbjct: 74 QVIINPKIVESSGEWVYDEGCLSIPGLYVEMLRPKKVLVSGFTLEGDEVQIEADELLARL 133 Query: 131 IQHEMDHLVGKLFMDYLSP 149 QHE+DHL G L D + P Sbjct: 134 FQHEIDHLQGVLMFDRMLP 152 >UniRef50_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TMS8_PHYPA Length = 202 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 15/178 (8%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 S L+V+ PD RLR K ++ + ++Q++V++M + MY +G+GLAA QV ++ R++V Sbjct: 9 SPLEVILYPDPRLRAKNKFIKVFDDKLQQLVNEMLDVMYKTDGVGLAAPQVGVNVRLMVY 68 Query: 62 DVSENR--DERLVLINPELLEKSGETG--IEEGCLSIP----------EQRALVPRAEKV 107 + S R + VL+NP ++ K G++ +EGCLS P A V R + V Sbjct: 69 NPSGERGSGKEYVLVNPRIV-KYGKSRDLFDEGCLSFPVLERGPNQSLTIEAEVERPKSV 127 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 +I A D GK F + A QHE DHL G L+ D ++P IR ++EKL++L Sbjct: 128 RIDAQDIKGKKFSINLKDFQARIFQHEYDHLEGILYFDRMTPEVLDTIRPELEKLEKL 185 >UniRef50_Q9FCA2 Peptide deformylase 2 n=4 Tax=Streptomyces RepID=DEF2_STRCO Length = 179 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 3/144 (2%) Query: 21 VEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLV--LINPEL 78 V + E+ +V+D+F TMYA G+GLAA QV R+ V D ++ DER + ++NP L Sbjct: 31 VTDFGPELAALVEDLFATMYAAHGVGLAANQVGEAVRVFVYDCPDDEDERHLGHVVNPRL 90 Query: 79 LEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDH 137 +E G EGCLS+P A R ++ + G+P + G A C+QHE DH Sbjct: 91 VETGGVVVRGPEGCLSLPGLEAGTERYDEAVVTGFTVAGEPVTVRGTGFFARCLQHECDH 150 Query: 138 LVGKLFMDYLSPLKQQRIRQKVEK 161 L G+++ D L+ + +++ ++V + Sbjct: 151 LEGRVYADRLTGRRHRKLMRQVAR 174 >UniRef50_D1N2T1 Peptide deformylase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2T1_9BACT Length = 197 Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 15/169 (8%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV-----SE 65 D L+ A+PVE V EI+ + +M E + G+G+AA QV R++V D+ E Sbjct: 16 DPVLKAKARPVEAVTPEIRELACNMQEALRVFSGVGIAAPQVGESLRLVVFDIPVDSMGE 75 Query: 66 NRD--ERLVL-------INPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 N E+L+L INPE++ S +EGCLS+P+ A V R V RA D Sbjct: 76 NPTVGEQLLLPRMPLTVINPEIVASSDVLCESDEGCLSVPDIWAPVVRPATVVFRATTLD 135 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 G+ E E GLL CIQHE+DHL G LF+D +SP + I + +++L R Sbjct: 136 GEVIECECGGLLGRCIQHELDHLDGVLFVDRVSPEAARTIERDLKQLIR 184 >UniRef50_A4RVA1 Peptide deformylase, organellar n=2 Tax=Eukaryota RepID=A4RVA1_OSTLU Length = 240 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 3/149 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + P + LR PVE + ++R+ MF+ MY G GLAA QV ++ R++V + Sbjct: 66 LAIAKYPAKCLRAKNAPVETFDKNLERLSKAMFKIMYETVGCGLAAPQVGVNYRMMVYNE 125 Query: 64 S--ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + +VL NPE+++ S E + EEGCLS P+ A V R V+I A + GK F+ Sbjct: 126 AGEPGQGREVVLCNPEIVKFSKEKDLFEEGCLSFPKMYADVERPIGVQIEAQNLKGKKFK 185 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSP 149 + +G A QHE DHL G L+ D +SP Sbjct: 186 MTLEGFEARVFQHEYDHLDGVLYHDRMSP 214 >UniRef50_A9WHG7 Peptide deformylase n=5 Tax=Chloroflexaceae RepID=DEF_CHLAA Length = 188 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 19/173 (10%) Query: 1 MSVLQVLHIPDERLRKVAK----PVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M++ ++L I D RK+ K PV+ + ++++V DMFETM A G+GLAA Q+ I Sbjct: 1 MAIRRILRIDDAEDRKILKMQCRPVKLPDRNLKQLVADMFETMRAAHGVGLAAPQIGIPI 60 Query: 57 RIIVIDVSENRDER-------------LVLINPELLEKSGETGI-EEGCLSIPEQRALVP 102 ++ +I++ +ER VLINP +++ SGE + +EGCLS+P +VP Sbjct: 61 QLCIIEIPAEYEERADGSVVEVAPAEPYVLINPRIVKMSGEEVMRDEGCLSLPGWYGMVP 120 Query: 103 RAEKVKIRALDRDGKPFELEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 R V + D +GK L G LL IQHE+DHL G LF + + L R Sbjct: 121 RQTWVTVEFQDLNGKHHRLRRAGDLLGWAIQHEVDHLNGILFTERIRDLSTLR 173 >UniRef50_Q5VNN5 Peptide deformylase 1B, chloroplastic n=3 Tax=Oryza sativa Japonica Group RepID=DEF1B_ORYSJ Length = 269 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+V+ PD LR K + + ++ + D+MF+ MY +GIGL+A QV ++ +++V + Sbjct: 78 LKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP 137 Query: 64 S--ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + E +VL+NP + + S + EEGCLS P A V R + VKI A D G + Sbjct: 138 AGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQDVTGAKIK 197 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 ++ GL A QHE DHL G LF D +S + +R+ ++ L++ Sbjct: 198 VKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241 >UniRef50_O51092 Peptide deformylase n=20 Tax=Borrelia RepID=DEF_BORBU Length = 172 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 8/161 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 ++++ P++ LR K +E ++ +I+ M E M G+GLAA QV + + V Sbjct: 7 FMEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFV-- 64 Query: 63 VSENRDER-LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 V EN+ R LV INP ++E S E + +EGCLSIP + R + V I D +GK F Sbjct: 65 VRENKMARPLVFINPSIIETSYEFSSYKEGCLSIPGVYYDLMRPKAVVINFHDENGKSFT 124 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +E LA IQHEMDHL G LF+DY +++++ K+ K Sbjct: 125 IENSDFLARIIQHEMDHLNGVLFIDYY----EEKLKNKLLK 161 >UniRef50_A3M399 Peptide deformylase n=16 Tax=Acinetobacter RepID=A3M399_ACIBT Length = 160 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 87/146 (59%), Gaps = 11/146 (7%) Query: 14 LRKVAKPVE--EVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSEN---- 66 L+ +A PV E+N+ + ++ D M TM G+G+AA QV I +RII++ N Sbjct: 15 LKLIAAPVSANELNSNWLYQLADAMHATMLERNGVGIAAPQVYISKRIIIVASRPNPRYP 74 Query: 67 ---RDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 +V++NPE+LE S ET + EEGCLS+P++R V RAE VK++ L G+ E Sbjct: 75 DAPEMNAVVMVNPEILEFSSETCLGEEGCLSVPDERGQVERAEMVKVKYLTLQGEAVETI 134 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLS 148 G A +QHE+DHL G LF++ +S Sbjct: 135 FHGFPARIVQHEVDHLNGILFVERIS 160 >UniRef50_Q0BUX2 Peptide deformylase n=11 Tax=Alphaproteobacteria RepID=Q0BUX2_GRABC Length = 209 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 6/149 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 MS+L++ + L + A PV + A EIQR+ DM ETM G+GLAA QV R+ Sbjct: 29 MSILKIARMGHPVLLRRADPVPDPTAPEIQRLALDMIETMIDAPGVGLAAPQVYQSLRMF 88 Query: 60 VIDVSENRD----ERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDR 114 V V +R VLINPEL E + EGCLSIP R VPRA +V+ R + Sbjct: 89 VFRVPVSRGGEEVSPTVLINPELEWVGDEIQMCWEGCLSIPGFRGEVPRAMRVRYRGIGL 148 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLF 143 DG E EA G A IQHE DHL G L+ Sbjct: 149 DGAVIEREASGFHANVIQHEYDHLDGILY 177 >UniRef50_Q8I372 Formylmethionine deformylase, putative n=2 Tax=Plasmodium RepID=Q8I372_PLAF7 Length = 241 Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 4/165 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID- 62 ++++ PD LR+ ++ V + ++R+V MF+ MY +GIGL+A QV+I +RIIV + Sbjct: 65 IKIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNA 124 Query: 63 VSENRDE--RLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + E R E + INP ++E+S + + EGCLS P V R V I D +G Sbjct: 125 LYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKH 184 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 G+ + QHE DHL G LF+D ++ + ++++R K+ +L R Sbjct: 185 LKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIR 229 >UniRef50_C0VXF2 Peptide deformylase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXF2_9CORY Length = 180 Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 20/147 (13%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 VLH P + + P +++DDMFETMYA G+GLAA QV + Q V D Sbjct: 12 VLHTPTQPVETPLSP---------KLIDDMFETMYAANGVGLAANQVGLSQSFFVFDCEG 62 Query: 66 NRDERLVLINPELLEKS--GETGIEE-----GCLSIPEQRALVPRAEKVKIRALDRDGKP 118 + V++NP +LE S ET +E GCLS+P + RA K+ D +G P Sbjct: 63 VKG---VVVNP-VLETSEVPETMPDEEEDLEGCLSLPGEFFPTGRASWAKVTGTDENGNP 118 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMD 145 E E + LA C QHE HL G+++ D Sbjct: 119 VEFEGEDFLARCFQHECGHLKGQVYTD 145 >UniRef50_B3L389 Formylmethionine deformylase, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3L389_PLAKH Length = 242 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 4/165 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LRK V + ++ +V MF MY +G+GLAA QV+I RIIV + Sbjct: 66 LKIVLYPDPVLRKKCNEVVNFDDNLRTLVRSMFNVMYESKGMGLAAPQVNISMRIIVWNA 125 Query: 64 ---SENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + ++ V INP ++E S + + EGCLS P+ V R V I D DG Sbjct: 126 LYEKKKKENERVFINPSIVEPSLIRSKLVEGCLSFPDIEGKVDRPRVVSISYYDLDGNKH 185 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 G+ A QHE DHL G LF+D S ++ ++R K+ ++ R Sbjct: 186 LKILKGIHARIFQHEYDHLDGILFIDRFSQSEKHKVRAKLNEMIR 230 >UniRef50_C9LLK7 Peptide deformylase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK7_9FIRM Length = 161 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 3/149 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 +++ D L+ VA PV + +++ +V++M +TMY G+GLAA Q+ + +R+ V D Sbjct: 10 KIITAGDPILKSVAMPVTAFDKKLKFLVNEMKKTMYESNGVGLAAPQIAVSKRVFVADDG 69 Query: 65 ENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 E+ E INP E + EGCLS+P V R V ++ D GK + +A Sbjct: 70 ESGFE--AYINPRWTPDGDEKVTDTEGCLSVPNWYGEVERYANVTVKYQDIHGKRKQKKA 127 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 GLLA CIQHE DHL G LF++ + L + Sbjct: 128 TGLLARCIQHETDHLNGILFIEKANSLHK 156 >UniRef50_A1SJX1 Peptide deformylase n=1 Tax=Nocardioides sp. JS614 RepID=A1SJX1_NOCSJ Length = 199 Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 10/154 (6%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLV- 72 + + +PV + E++ + DM TMYA +G+GLAA Q+ + + V D ++ V Sbjct: 34 MHRAQQPVTTYDDELRALAADMVATMYAADGVGLAACQIGVDLAMFVFDCPDDSGVHTVG 93 Query: 73 -LINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLL 127 + NP+L G EEGCLS P R ++ + DG+P DGLL Sbjct: 94 VVCNPQLTLPEGRDRQLDESEEGCLSFPGAHVECARPDQASVTGTGLDGEPVSFSGDGLL 153 Query: 128 AICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 A C+QHE DH G +F D LS ++R++++K Sbjct: 154 ARCLQHETDHTRGTVFGDRLS----TKLRKRLQK 183 >UniRef50_UPI00017437A9 peptide deformylase n=6 Tax=candidate division TM7 RepID=UPI00017437A9 Length = 238 Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 11/149 (7%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMF-------ETMYAEEGIGLAATQVDIHQRIIVID 62 P+E LR+ +K + + E+++++ DM E+ E LAA QVD +RI+++ Sbjct: 57 PNEHLRQKSKKIHVITDEVKKLISDMTSAAIDWEESRPHEISAALAAVQVDKLERIVIVR 116 Query: 63 V---SENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +++ + LINPE+++ GE + EGCLS+ + VPR KV+++AL+ DGK Sbjct: 117 SEFDNKSNNHFTALINPEIIKYEGEITYDYEGCLSVSKVYGKVPRYNKVRVKALNEDGKE 176 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYL 147 ++A+G LA +QHE+DH G +F+D++ Sbjct: 177 IRIKAEGFLARVLQHEIDHTNGIVFIDHI 205 >UniRef50_Q72H33 Peptide deformylase n=8 Tax=Deinococci RepID=DEF_THET2 Length = 192 Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 15/157 (9%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI----DVSEN 66 D LR+ A+PVE+ + I+R+ +DM ETM+ +G+GLAA Q+ + QR+ V D E Sbjct: 10 DPVLRRKARPVEDFSG-IKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFVAVEYADEPEG 68 Query: 67 RDER---------LVLINPELLEKSGETGIEEGCLSIPEQRAL-VPRAEKVKIRALDRDG 116 +ER V+ NP + + G EGCLS+P + VPRAE++++ D +G Sbjct: 69 EEERPLRELVRRVYVVANPVITYREGLVEGTEGCLSLPGLYSEEVPRAERIRVEYQDEEG 128 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 + LE +G +A QHE+DHL G LF + L K++ Sbjct: 129 RGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKRE 165 >UniRef50_C6HZ73 Peptide deformylase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ73_9BACT Length = 175 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 5/150 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV ++ D LR ++PV+ E++++V D+F+T+ ++G+ +AA Q+ + R+ V Sbjct: 1 MSVRPLVSHRDTVLRIASEPVDPCAPEVRQVVQDLFDTLATQKGVAMAAPQIGVAMRLFV 60 Query: 61 IDVSENRDE-----RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D+ R++ R +LINP + + G + EGCLS P + R E V + D Sbjct: 61 FDLKRPREKGGPPTRGLLINPTIERRFGSIPVIEGCLSFPGLDLSIRRPEGVVVSGYGLD 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMD 145 GK LE GL A ++HE DHL G+L D Sbjct: 121 GKKVVLEGGGLFARMVEHETDHLEGRLLPD 150 >UniRef50_A5FGV5 Peptide deformylase n=59 Tax=cellular organisms RepID=DEF_FLAJ1 Length = 196 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 21/183 (11%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L ++ D LRKV + ++ + +M+ETMY G+GLAA QV + RI VID Sbjct: 2 ILPIVGYGDPVLRKVGTAITPDYPNLKETIANMYETMYNAYGVGLAAPQVGLPIRIFVID 61 Query: 63 VSENRDE--------------RLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKV 107 + D+ + IN +++++ G E EGCLSIP+ R V R V Sbjct: 62 TTPFSDDEDLPADEQKDLKGFKRTFINAKIVKEEGEEWSFNEGCLSIPDVREDVYRKPTV 121 Query: 108 KIRALDRDGKPFELEA---DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 I + D F ++ DGL+A IQHE DH+ G LF D +S LK++ I++K++ + Sbjct: 122 TIEYCEED---FVMKTEVFDGLIARVIQHEYDHIEGVLFTDKISSLKKRLIQKKLKNITE 178 Query: 165 LKA 167 K Sbjct: 179 GKT 181 >UniRef50_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FF41_9CHLO Length = 257 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 3/148 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + P LR K V +++++++ MF+ MY EG+GLAA QV ++ R++V + Sbjct: 84 LAIQKYPHASLRNDNKIVGVFDSDLEKLAQAMFKIMYDTEGVGLAAPQVGVNYRMMVYNE 143 Query: 64 S--ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + +VL+NP++++ S + EEGCLS P+ A V R V++ A + GK F+ Sbjct: 144 AGEPGRGKEVVLVNPKIVKFSKTKDLFEEGCLSFPKIYADVERPTSVQVEAQNLRGKKFK 203 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLS 148 + DG A QHE DHL G LF D ++ Sbjct: 204 MTLDGFEARVFQHEYDHLDGVLFHDRMT 231 >UniRef50_A0LUE1 Peptide deformylase n=4 Tax=Actinomycetales RepID=DEF_ACIC1 Length = 180 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 3/149 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + D LR A+PV + + E++ ++ D+ ETM G+GLAA Q+ + R+ V Sbjct: 1 MAVRPIRLFGDPVLRTPAEPVTDFDKELRVLIKDLIETMQDAPGVGLAAPQIGVSLRVFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 DV L+NP L + +EGCLS+P + RA++ + + G+P Sbjct: 61 YDVDGVVGH---LVNPSLDLSEEQQDGDEGCLSLPGLSYPLKRAKRAVAKGFNEFGEPVI 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSP 149 LE LLA C+QHE DHL G LF+D L P Sbjct: 118 LEGSDLLARCVQHETDHLDGVLFIDRLDP 146 >UniRef50_A8LE21 Peptide deformylase n=17 Tax=Actinomycetales RepID=DEF_FRASN Length = 183 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 3/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV + + D LR VA PV + E++R+VDD+ +TM G+GLAA Q+ + RI Sbjct: 1 MSVRDIRLLGDPVLRTVADPVATFDRELRRLVDDLADTMRDAGGVGLAAPQLGVSLRIFT 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ DE LINP L S E EEGCLS+P + R E+V + G P Sbjct: 61 Y--LDDSDEVGHLINPVLGPFSEEMMDGEEGCLSLPGLAFDLRRPERVLAVGQNSHGDPV 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL 147 +E G+L+ C+QHE DHL G LF+D L Sbjct: 119 TVEGSGILSRCLQHETDHLDGILFIDRL 146 >UniRef50_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=4 Tax=core eudicotyledons RepID=DEF1B_ARATH Length = 273 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LR K ++ + ++ +VD MF+ MY +GIGL+A QV ++ +++V + Sbjct: 81 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 140 Query: 64 SENRDE--RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + E +VL+NP++ + S + +EGCLS P A V R + VKI A D G+ F Sbjct: 141 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 200 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + L A QHE DHL G LF D ++ IR+++E L++ Sbjct: 201 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEK 244 >UniRef50_Q7NAK8 Peptide deformylase n=2 Tax=Mycoplasma gallisepticum RepID=DEF_MYCGA Length = 213 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 7/138 (5%) Query: 21 VEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE--NRDERLVLINPEL 78 ++++ A + DD E GIG+AA Q+ ++QR + ++ ++ R +LINPE Sbjct: 56 IDKMLAYVDESFDDNAEKYDIRPGIGIAANQLGLNQRFFYVHFTDFCQKEHRYLLINPEW 115 Query: 79 LEKS---GETGIEEGCLSIPEQR-ALVPRAEKVKIRALDR-DGKPFELEADGLLAICIQH 133 ++KS + EGCLS+P+ + V R+E VK++ D K E+ A GLLA+C+QH Sbjct: 116 IDKSLNKAYLAVGEGCLSVPKDKDGYVIRSETVKLKGFDYLTQKDVEISAHGLLAMCLQH 175 Query: 134 EMDHLVGKLFMDYLSPLK 151 EMDHL GK + D ++ +K Sbjct: 176 EMDHLEGKFYYDSINMMK 193 >UniRef50_C5VIH1 Peptide deformylase n=2 Tax=Prevotella RepID=C5VIH1_9BACT Length = 186 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 9/165 (5%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI-------DVSEN 66 LRKVA+ + ++Q ++ +MFET A +G+GLAA Q+ R++V+ E Sbjct: 13 LRKVAEDIPLDYPDLQELIQNMFETNTASDGVGLAAPQIGKSIRVVVVDLDVLSDTFPEY 72 Query: 67 RDERLVLINPELLEK--SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 +D R IN +LE S +EEGCLS+P V RA++V ++ D + E D Sbjct: 73 KDYRHAFINGHILEYDDSETETLEEGCLSLPGVHESVTRAKRVYVKWYDENLVEHEEWID 132 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 G LA IQHE DHL G++F D LS ++Q I K++ L + K R Sbjct: 133 GYLARVIQHEFDHLEGRVFTDRLSAFRKQMITSKLKALLQGKVRC 177 >UniRef50_A9G9J7 Peptide deformylase n=2 Tax=Myxococcales RepID=A9G9J7_SORC5 Length = 191 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 11/156 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++L++ HI + LR+ A+ V E + +Q +DD+ ETM G G+AATQV + R Sbjct: 1 MTLLKIAHIGNPVLRQRAREVTEEELSSPAMQAFIDDLVETMRDANGAGIAATQVHVPVR 60 Query: 58 IIVIDVSENRDERL-------VLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKI 109 I ++V +N V++NP + + ET EGCLS+P R +V R ++++ Sbjct: 61 IFAVEVQDNPRYPYKPNIPLTVVVNPVIEPLTQETFENYEGCLSVPNLRGVVDRTTEIRL 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 LDR+G+P + GL A QHE DH+ G LF+D Sbjct: 121 TGLDREGRPIDRVVRGLSAGTFQHEKDHVDGVLFVD 156 >UniRef50_Q8G487 Peptide deformylase 2 n=33 Tax=Bacteria RepID=DEF2_BIFLO Length = 162 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 5/148 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +PD LR ++E+ ++R+VDD+ ET+ GL+A Q+ + R Sbjct: 1 MAIREIRVVPDPVLRTPCDEIKEITPAVRRLVDDLLETVDDPGRAGLSANQIGVSLRAF- 59 Query: 61 IDVSENRDERL-VLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 S N D ++ ++NP L EKSGE +EGCLS+P RA+ ++R +D DG Sbjct: 60 ---SYNIDGKVGYVLNPVLEEKSGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGNEV 116 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL 147 LE GL+ +QHE DHL G +++D L Sbjct: 117 VLEGSGLMGRMLQHECDHLDGHVYLDRL 144 >UniRef50_A0LDD7 Peptide deformylase n=5 Tax=Proteobacteria RepID=A0LDD7_MAGSM Length = 177 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 10/177 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETM-YAEEGIGLAATQVDIHQ 56 M++L VL PD+RL + + +E A Q V+D+ ET +A +GLAA QVD Sbjct: 1 MAILDVLVYPDQRLLQPCRSLEAEEFKTAAFQAFVEDLIETTQHAPGCVGLAAPQVDHAI 60 Query: 57 RIIVIDVSENR---DER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 R++V++ R DE L+L NPE++ G EGC+S+P+ V RA + ++ Sbjct: 61 RMVVVNCGLARKPPDEHHGELILCNPEIISWEGMETAREGCMSVPDYTGNVMRATHISVQ 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 DR G+ G A +QHEMDHL GKLF D + K +KV + R +A Sbjct: 121 FQDRHGQEQVRHFKGFEARVVQHEMDHLEGKLFTDRVVSRKADLFPRKVYQKKRNRA 177 >UniRef50_Q9K4A0 Peptide deformylase 4 n=7 Tax=Streptomyces RepID=DEF4_STRCO Length = 216 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 11/161 (6%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLV- 72 L K + V + E Q++V DMF + EG+GLAA Q+ + +++ V D ++ R V Sbjct: 52 LHKECEDVTDFGEEFQQLVADMFASQRTAEGVGLAANQIGVSKKVFVYDCPDDEGVRHVG 111 Query: 73 -LINPELLEKSGE----TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLL 127 + NP L+E + EGCLS+P A + R + ++ D G P ++ G Sbjct: 112 VVCNPRLVELPADRRRLDDSNEGCLSVPTAYAPLARPDYAEVTGQDEKGNPVKVRGTGYF 171 Query: 128 AICIQHEMDHLVGKLFMDYLSPLKQQR---IRQKVEKLDRL 165 A C+QHE DHL G L++D LS K++R +RQ E R Sbjct: 172 ARCLQHETDHLYGYLYIDRLS--KRERKDALRQMAENEPRY 210 >UniRef50_Q2RVK0 Peptide deformylase n=2 Tax=Rhodospirillales RepID=Q2RVK0_RHORT Length = 169 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 11/140 (7%) Query: 14 LRKVAKPVEE-VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER-- 70 L +A+PVE+ + +I R+V DM ET+ G+GLAA QV + R+++ V NR Sbjct: 4 LAGIARPVEDPTDPKIHRLVADMIETLADSGGVGLAAPQVHVPLRVMIFHVPANRSTEAE 63 Query: 71 -----LVLINPELLEKSGETGIE--EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 VLINP+L GE +E EGCLS+P LVPR ++ R +D DG+ E EA Sbjct: 64 GAVPLTVLINPQL-TPLGEEMVEDWEGCLSLPGLTGLVPRYRSLRYRGVDLDGREVEREA 122 Query: 124 DGLLAICIQHEMDHLVGKLF 143 A +QHE DHL G L+ Sbjct: 123 RDFHARVVQHEYDHLDGVLY 142 >UniRef50_A3V199 Peptide deformylase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V199_9RHOB Length = 152 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 3/138 (2%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS--ENRD 68 D LR VA+PV + ++ +V +M TMYA G GLAA QV + QR+ VID + + Sbjct: 10 DPVLRAVAEPVTAFDEDLALLVAEMLATMYAAPGRGLAAPQVGVSQRVFVIDTTWKDGDP 69 Query: 69 ERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLL 127 + +NP+++ +S T E CLSIP++ V R V +R D G + DG+ Sbjct: 70 DPQAFVNPQIIARSKTTATAVEACLSIPDRAFAVTRPIWVDMRWQDIAGDVQQGRFDGVA 129 Query: 128 AICIQHEMDHLVGKLFMD 145 AIC+ HE DHL G L D Sbjct: 130 AICVCHEYDHLDGVLITD 147 >UniRef50_B4U7R8 Peptide deformylase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7R8_HYDS0 Length = 164 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 92/155 (59%), Gaps = 7/155 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE-GIGLAATQVDIHQRIIVI 61 + ++L P+ L++ +K V +++ I + ++++ ETMY+++ G+A++QV + Q I+V+ Sbjct: 2 IYEILVYPNPLLKEKSKDVNKIDDNIIKHIENLKETMYSKDFCTGIASSQVGVLQNIVVM 61 Query: 62 DVS------ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D S +N + LINP +++ EGCLS+PE A + R + V ++ALD Sbjct: 62 DASRFRKPPKNHHGLITLINPVIIKSEDSIIFREGCLSVPEYTANIQRYKHVSVKALDEK 121 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 L+ +G A+ QHE+DHL G LF+D L+ L Sbjct: 122 ENEIILDLEGPEAVLFQHELDHLNGILFLDRLTSL 156 >UniRef50_Q3SKP4 Peptide deformylase n=6 Tax=Betaproteobacteria RepID=Q3SKP4_THIDA Length = 177 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 11/153 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEE-VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V +VL + D RL A+ VE AE+ ++V DM +TM A G GLAA Q+ + +++ Sbjct: 1 MAVREVLKMGDPRLLAPARAVERFATAELAQLVADMHDTMRALNGAGLAAPQIGVSLQVV 60 Query: 60 VIDVSENRDER-------LVLINPEL--LEKSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 + +V+ N VL+NP + L + E G E GCLS+P R LVPR ++ R Sbjct: 61 IFEVNANPRYPDAAEVPLTVLVNPVVTPLSDATEEGWE-GCLSVPGMRGLVPRHGEIHYR 119 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLF 143 D G+ E G A +QHE+DHL G L+ Sbjct: 120 GFDAAGRALERRVSGFHARVVQHEVDHLNGILY 152 >UniRef50_B1ZMD5 Peptide deformylase n=2 Tax=Verrucomicrobia RepID=DEF_OPITP Length = 192 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 20/185 (10%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++H D LR+ + + + + ++ +M TM GIGLAA Q+ ++ V+D+ Sbjct: 3 LRIVHYNDPVLRRKGEKITAFDKALSQLAKEMLATMQEAAGIGLAAQQIGRPVQLCVVDL 62 Query: 64 SENRDE----------------RLVLINPELLEKSGETGI---EEGCLSIPEQRALVPRA 104 + +++ NPE+ ET + EEGCLS P+ R VPR Sbjct: 63 RRAEIDFTWELDGAKPPLDLIMPMIITNPEITPDR-ETDVYLVEEGCLSFPKIRGDVPRP 121 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + + +R D G P L DGLLA CIQHE+DHL G LF+D + + I V+ L + Sbjct: 122 DAITVRYQDEHGTPHTLHCDGLLARCIQHEVDHLNGVLFIDRMEKKTRAAIDADVKTLAK 181 Query: 165 LKARA 169 + A Sbjct: 182 ITRAA 186 >UniRef50_Q2J9M0 Peptide deformylase n=1 Tax=Frankia sp. CcI3 RepID=Q2J9M0_FRASC Length = 230 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 43/191 (22%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + + D LR V E + + R+V DM +TMY G+GLAA Q+ + R+ V Sbjct: 1 MTVLPIRTVGDPVLRTPTTLVTEFDTALGRLVTDMIDTMYDAPGVGLAAPQIGVGLRLFV 60 Query: 61 IDVS-ENRDERLVLI----------------------NPELLEKSGET------------ 85 DV + RDE + + P +++SGET Sbjct: 61 FDVDYDPRDESVPRVPRVVVNPVLELGPDPGRPGETQRPGGIQRSGETQRSGETQRSGET 120 Query: 86 --------GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDH 137 EGCLS+P RA ++R +D G+P E +GLLA C QHE+DH Sbjct: 121 QRSGETQQHGPEGCLSVPGLHFPTTRALAARVRGVDVTGQPVEYAGEGLLARCFQHEVDH 180 Query: 138 LVGKLFMDYLS 148 L G L++D L+ Sbjct: 181 LDGILYVDRLT 191 >UniRef50_C7NDD2 Peptide deformylase n=4 Tax=Fusobacteriaceae RepID=C7NDD2_LEPBD Length = 172 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVL 73 LR+ ++ V+ V+ ++ +D+M M G+GLAA QVDI +R V+ E+ + Sbjct: 11 LRQKSEKVDVVDDNVRETLDEMVALMRKANGVGLAANQVDIAKRFFVL---EHDGVVKKV 67 Query: 74 INPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQ 132 INPE+LE S E +EEGCLSIP V R K+K++ L+ +GK E + + + Q Sbjct: 68 INPEILEFSDEIVDMEEGCLSIPGVFKKVNRPAKIKVKYLNENGKEVVEELEEMWSRAFQ 127 Query: 133 HEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 HE DH+ G LF D LS + ++ + +K++ L R Sbjct: 128 HEFDHIEGILFTDKLSVMNKRLVAKKLDVLKR 159 >UniRef50_Q8NM41 Peptide deformylase 2 n=13 Tax=Actinomycetales RepID=DEF2_CORGL Length = 193 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ D L + V E +E+Q ++ DM+ETM G+GLAA Q+ + +RI V Sbjct: 1 MTVRPIVIHGDPVLHNPTQLVTEDVSELQELIADMYETMDVANGVGLAANQIGVSKRIFV 60 Query: 61 IDVSENRD--ERLVLINPELLEKS--------GETGIEEGCLSIPEQRALVPRAEKVKIR 110 D ++ + INP +LE S + EEGCLS+P + RA K+ Sbjct: 61 YDCPDDEGVMHKGCFINP-VLETSEIPETMPADDGSDEEGCLSVPGEGFPTGRAHWAKVT 119 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 L+ G+ +EA+G LA C QHE+ HL G L+ D L Sbjct: 120 GLNEKGEEVSVEAEGFLARCFQHEVGHLDGFLYTDVL 156 >UniRef50_P63919 Peptide deformylase-like n=42 Tax=Alphaproteobacteria RepID=DEFL_BRUME Length = 164 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ PD RLR A+PV + ++++ DD+ +TM A GIG+ A + I +R++V Sbjct: 1 MTVRLIVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGISKRVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +++ + + INPE++ E +EG +S+P V R ++++R D DG Sbjct: 61 LELDRAAGPK-IYINPEIVWACEEKIRHQEGSVSMPGVVDEVERHARIRLRYQDLDGNEQ 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E+DGLLA+C QHE+D L G ++ LS L+++R+ ++ EKL R Sbjct: 120 TEESDGLLAVCHQHEIDQLDGIFWVQRLSRLRRERLIKRYEKLQR 164 >UniRef50_B6RGY0 Peptide deformylase 1A, chloroplastic n=3 Tax=Magnoliophyta RepID=DEF1A_ORYSJ Length = 260 Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 25/175 (14%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS- 64 VLH P + + P E+V Q ++D M M G+GLAA Q+ + +IIV++ + Sbjct: 81 VLHEPAQDVAPGDIPSEKV----QGVIDRMVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQ 136 Query: 65 -----------ENRDER----LVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVK 108 E +D R LV+INP+L S T + EGCLS+ RALV R V+ Sbjct: 137 EYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRALVERHLDVE 196 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 + LDR+G+P ++EA G A +QHE DHL G L++D + P R + V+ LD Sbjct: 197 VSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVP----RTFRIVDNLD 247 >UniRef50_A0PNK2 Peptide deformylase n=50 Tax=Actinomycetales RepID=DEF_MYCUA Length = 197 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 17/163 (10%) Query: 1 MSVLQVLHIPDERLRKVAKPVE-----EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIH 55 M+V+ + + D L PV + A++ ++ M+ETM A G+GLAA Q+ Sbjct: 1 MAVVPIRIVGDPVLHTPTSPVPVGADGSLPADLPELIATMYETMDAAHGVGLAANQIGYG 60 Query: 56 QRIIVIDVSENR----DERLVLINPELLEKS-------GETGIEEGCLSIPEQRALVPRA 104 R+ V D +++R R V+INP +LE S +EGCLS+P + RA Sbjct: 61 LRLFVYDCADDRRKAAHRRGVVINP-VLETSEIPENMPDPDNDDEGCLSVPGESFPTGRA 119 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 ++ LD +G P ELE GL A +QHE HL G L++D L Sbjct: 120 TWARVTGLDAEGNPVELEGSGLFARMLQHETGHLDGYLYLDCL 162 >UniRef50_A6W503 Peptide deformylase n=2 Tax=Actinomycetales RepID=A6W503_KINRD Length = 200 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 15/152 (9%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLV- 72 L + PV + ++ ++V DMF +M A +G+GLAA Q+ + R+ V+D ++ ER Sbjct: 36 LHRPTTPVTSFDEDLVQLVADMFASMDAADGVGLAANQIGVDARVFVVDCPDDDTERTGE 95 Query: 73 -----LINPELLEKSGE------TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 ++NP L +G G EGCLS+P + A + R +K + D G P ++ Sbjct: 96 NVVAHVVNPVLELPTGRRRRLDLDG--EGCLSVPGEYADLARPDKATVTGKDVHGNPVKI 153 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 GLLA C+QHE DHL G +++D L P +Q+ Sbjct: 154 VGTGLLARCLQHESDHLDGVVYVDRL-PAEQR 184 >UniRef50_A9HS47 Peptide deformylase n=2 Tax=Alphaproteobacteria RepID=A9HS47_GLUDA Length = 176 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 9/157 (5%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRD----- 68 LR+ + + +I R++DDM ETM G GLAA QV + R+ V V R Sbjct: 15 LRRADEVADPTAPDIARLIDDMIETMEDARGAGLAAPQVHVSLRLFVYRVPAERSAGGDD 74 Query: 69 ---ERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E VLINP L E + EGCLSIP R +VPR ++ LDR G+ + A Sbjct: 75 PPRETSVLINPVLSLVDDEMALRPEGCLSIPGLRGMVPRHVRIAYSGLDRAGQAVQGVAS 134 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G LA +QHE DHL G L+ ++ L Q +++ + Sbjct: 135 GFLANVLQHEYDHLDGILYPMRMTDLGQMGFDEEIGR 171 >UniRef50_Q28V78 Peptide deformylase n=2 Tax=Rhodobacteraceae RepID=Q28V78_JANSC Length = 161 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 10/157 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV +VL PD L V V V+ E+ + D+F+TMYA +G GLAA Q+ + QR+ V Sbjct: 1 MSVRRVLLWPDPLLSVVCDAVVAVDPEL---IKDLFDTMYAAKGRGLAAPQIGVLQRVFV 57 Query: 61 IDVSEN---RDERLVLINPELLEKSGET--GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 +DV+ RD R V INP ++ SGE +EE CLSIP+ V R + + + Sbjct: 58 VDVTWKEGARDPR-VFINP-VVRDSGEDMRSMEEQCLSIPDLPMQVTRPTTLTLDWETPE 115 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 G+ DG LA CI HE+DHL G + D+ SP ++ Sbjct: 116 GRKTTGTFDGNLARCILHELDHLDGTVIFDHQSPARR 152 >UniRef50_Q6MD22 Peptide deformylase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD22_PARUW Length = 176 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 13/161 (8%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR----II 59 L + + D LRK + E+N I+++V DM ETM A +G GLAA QV HQ I Sbjct: 3 LPLAYYGDSVLRKKGSQIAEINDTIKQLVQDMIETMEANDGCGLAAPQV--HQSLSLFIT 60 Query: 60 VIDVSENRDERL-----VLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALD 113 I D+ + V INP++L S E +E CLSIP R V R KV I+A D Sbjct: 61 CIPQYLENDQVIPGQVRVFINPKILSYSQEVWACQEACLSIPGMRETVSRPLKVTIQATD 120 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 +G F E G A I HE DH+ G L++D L P K+++ Sbjct: 121 LNGHTFTEEFAGFDAHVIMHENDHVNGVLYIDRL-PSKRKK 160 >UniRef50_Q15Q99 Peptide deformylase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Q99_PSEA6 Length = 188 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 13/146 (8%) Query: 14 LRKVAKPVEEVNAE---IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRD-- 68 LR AK V + + E Q VD + TM G+G+AA QV +R ++I S Sbjct: 12 LRTPAKSVSQTDIETGAFQEFVDALLATMQEANGVGIAAPQV-FDERAVMIIASRPSPRY 70 Query: 69 ------ERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 E LVLINP++++ S ET + EGCLS+P R + RA V+I L RDG P Sbjct: 71 PNAPDMEPLVLINPKVIQSSEETVKDWEGCLSVPGLRGFIRRATWVEIEYLQRDGTPATQ 130 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYL 147 DG +A HE DHL+GK ++D++ Sbjct: 131 RLDGFVARIFLHEFDHLIGKTWLDHV 156 >UniRef50_Q05FG5 Peptide deformylase n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FG5_CARRP Length = 154 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 4/147 (2%) Query: 3 VLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + ++L+ D+R+R K V+ N I I+ M MY GIG+++ Q++ + II+ Sbjct: 1 MFKILNFKDKRIRLFFKNVKVSFNYNILYIIKQMIILMYKNNGIGISSNQINCFKNIIIC 60 Query: 62 DVSENRDERLVLINPELL--EKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DV+ + + L++INP++L K+ G+E GCLSI V R +KV I+ + K Sbjct: 61 DVNFKKKKPLIMINPKILINNKNHTLGME-GCLSIKNFLISVLRFDKVYIKYFNIYNKKK 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDY 146 + +G+ + CIQHE+DHL KL +DY Sbjct: 120 KKIFNGIKSRCIQHEIDHLNSKLILDY 146 >UniRef50_Q0RM09 Peptide deformylase n=4 Tax=Actinomycetales RepID=Q0RM09_FRAAA Length = 190 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 8/154 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + + D LR V +A + R+V DM +TMY G+GLAA Q+ + R+ V D Sbjct: 1 MLPIRTVGDPVLRTPTALVTTFDAALARLVHDMIDTMYDAPGVGLAAPQIGVGLRVFVFD 60 Query: 63 VSEN-RDERLVLINP-------ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 V + RD + + EL + +EGCLS+P RA + +R +D Sbjct: 61 VGYDPRDVTVPRVPRVVVNPVLELAADGEQQEGQEGCLSVPGLHFSTTRALRASVRGVDV 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 G E +GLLA C QHE+DHL G L++D L+ Sbjct: 121 TGAAVEYAGEGLLARCFQHEVDHLDGTLYLDRLT 154 >UniRef50_B0MFU0 Peptide deformylase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFU0_9FIRM Length = 153 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 4/146 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYA-EEGIGLAATQVDIHQRII 59 M+V ++ D L+K K V EV+ + ++ +DD+ +T+++ + G LAA Q I +R+I Sbjct: 1 MAVRKIRTGNDPILKKKCKTVPEVDDKARQQLDDLMDTLHSSDNGAALAANQAGILRRMI 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID L L+NP ++E SG EGCLS P + R +VK+ ALD +G Sbjct: 61 VIDY---EGYYLKLVNPVIVESSGSQECVEGCLSFPNRFGKTIRPARVKVEALDENGHEV 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 G +A C HE+DHL G++F+D Sbjct: 118 SYTVVGEMAKCFCHEIDHLDGEVFID 143 >UniRef50_A4E6J7 Peptide deformylase n=3 Tax=Collinsella RepID=A4E6J7_9ACTN Length = 180 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 7/165 (4%) Query: 10 PDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV---SEN 66 PD RLR+ +EE+ I+ + + M + M+ G GLAA Q+ +++ ID +N Sbjct: 12 PDPRLRQECAVIEEITPAIEALAEKMKKIMFENGGCGLAAPQIGELIQLVTIDCDYSDKN 71 Query: 67 RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 + VLINP ++E+S EGCLSIP + R + V + A D D EA G Sbjct: 72 DYDPYVLINPVIVEQSDHLVPFSEGCLSIPGISCEIERPDHVVVEAYDLDANLIRYEATG 131 Query: 126 -LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 L +C+QHE+DHL G + L P+ QRI+ E D L A Sbjct: 132 DLFCVCLQHEIDHLHGNTMFERLKPM--QRIKAVKEYQDALARGA 174 >UniRef50_C7PQZ8 Peptide deformylase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQZ8_CHIPD Length = 191 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 17/152 (11%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV-----SENRD 68 LRK PV++ + +++++M+ T+ G GLA Q+++ RI +ID + N + Sbjct: 11 LRKQCSPVDKNYDGLDKLIENMWHTLENANGSGLATPQINLPIRIFIIDSETSFNTMNPE 70 Query: 69 ERLV-----------LINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 ER V INPE+ E S + EGCLSIP A+V R VKI DR+ Sbjct: 71 ERKVHFEGDNGIREVFINPEITEYSEAKCDDLEGCLSIPGVAAIVSRPYAVKIEYYDRNF 130 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 + +GL A IQHE DH+ G+L++DYLS Sbjct: 131 QKHTKAFNGLTARIIQHEFDHIEGRLYLDYLS 162 >UniRef50_B8DUA2 Peptide deformylase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUA2_BIFA0 Length = 160 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +PD LR P+ E+ ++ +V D+ +T+ G++A Q+ + R Sbjct: 1 MAIREIRVVPDPVLRTPCDPITEITPAVRNLVQDLLDTVDDPGRAGVSANQIGVSLRAF- 59 Query: 61 IDVSENRDERL-VLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 S N D ++ ++NP L E GE +EGCLS+P+ RA+ ++R +D DG Sbjct: 60 ---SYNIDGKIGYVLNPVLEETRGEQYGDEGCLSLPKLWYKTKRADYARVRGMDLDGNEI 116 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL 147 LE DG++ +QHE DHL G L++D L Sbjct: 117 VLEGDGIMGRMLQHETDHLDGHLYIDRL 144 >UniRef50_C0CWB1 Peptide deformylase n=2 Tax=Clostridium RepID=C0CWB1_9CLOT Length = 155 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 85/146 (58%), Gaps = 4/146 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAA-TQVDIHQRII 59 M+V + DE LRK K V+ V+ ++ ++DDM +T++A EG A QV I +R++ Sbjct: 1 MAVRTIRTEGDEALRKRCKEVKNVDERVRALLDDMMDTLHATEGAAALAANQVGILKRLV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID L L+NP ++ + G EGCLS P + A R + V ++ALD +GK Sbjct: 61 VIDYCGCV---LKLVNPVIVGRDGVQECLEGCLSFPGRIATTIRPQSVTVQALDENGKEV 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 L +G +A C HE++HL G++F+D Sbjct: 118 LLTGEGEMAKCYCHELEHLDGEVFLD 143 >UniRef50_Q253S4 Peptide deformylase n=14 Tax=Chlamydiaceae RepID=DEF_CHLFF Length = 186 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 88/161 (54%), Gaps = 10/161 (6%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV-SENRDERLV 72 LR+ A + E+ I+++V DM+ETM A +G+GLAA QV + V+ V E D L+ Sbjct: 13 LRRKADIIPEITDTIRQLVQDMYETMVAHKGVGLAAPQVGESLSLFVVCVEGETEDGDLI 72 Query: 73 L-------INPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 INP L S + I EGCLSIP RA V R + + + AL+ DG+ F + Sbjct: 73 FCDFPKVYINPVLSNASEDLVIGREGCLSIPGLRADVYRPQSITVTALNLDGQEFTEHLE 132 Query: 125 GLLAICIQHEMDHLVGKLFMDYL-SPLKQQRIRQKVEKLDR 164 G A I HE DHL G L++D + P ++ + +EK+ R Sbjct: 133 GFPARIIMHENDHLHGVLYIDKMEEPKDIKKFKASLEKIRR 173 >UniRef50_D1R4B7 Peptide deformylase n=2 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B7_9CHLA Length = 178 Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 8/143 (5%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV------- 63 D LRK VE+++++++++V+DM ET+ A GIGLAA QV + + V Sbjct: 10 DPILRKKCARVEQIDSQLKQLVNDMVETLEAHRGIGLAAPQVHHELNLFITKVPIRYKNG 69 Query: 64 SENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 E+ V +NP++L S E EGCLSIP A V R + ++ D DGK + Sbjct: 70 KEDSGNLHVFVNPKILAYSEEKNRYTEGCLSIPNVYAPVERPLSITVQYTDLDGKTCVED 129 Query: 123 ADGLLAICIQHEMDHLVGKLFMD 145 GL A CI HE DH+ G LF+D Sbjct: 130 FSGLEARCILHENDHINGVLFID 152 >UniRef50_B0SHH1 Peptide deformylase n=6 Tax=Leptospira RepID=DEF_LEPBA Length = 179 Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 14/164 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M+V ++L I + LR+ ++ V E + ++++ DMFETM +G+GLAA Q+ + ++ Sbjct: 1 MAVRKILKIGNPILRQTSEDVSESEIQTKDFKKLIRDMFETMRHADGVGLAAPQIGVLKK 60 Query: 58 IIVIDVSENRDERL---------VLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKV 107 ++V+ E+ +ER +++NPE+ S G EGCLS+P R V R K+ Sbjct: 61 LVVVG-QEDDNERYPGTPEVPNQIILNPEITPLSPPRDGFWEGCLSVPGMRGYVERPNKI 119 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 +++ D + + +G AI +QHE DHL G L++D L K Sbjct: 120 RMKWRDENYVEHDEIIEGYRAIVLQHECDHLFGVLYVDRLKSTK 163 >UniRef50_Q8UF49 Peptide deformylase-like n=19 Tax=Rhizobiales RepID=DEFL_AGRT5 Length = 164 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L P L + PV + ++ +V D+ +TM A G+G+ A + + QR+ V Sbjct: 1 MAIRPILPYPHAGLSGICAPVTVFDDHLRELVTDLIDTMRAAPGVGITAAHIGVLQRVFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++++ L INPE+ S +T EG +S+P V R V++R D G Sbjct: 61 LELTPG--TILTYINPEITSHSPQTMRHVEGSVSMPGFTDEVERPSTVEVRFQDITGAEQ 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 A+G AICIQHE+D L G ++ LS LK+ R+ +K EK Sbjct: 119 TETAEGFHAICIQHEIDQLDGIFWLKRLSRLKRDRLVKKWEK 160 >UniRef50_Q0EWE9 Peptide deformylase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWE9_9PROT Length = 169 Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 6/146 (4%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRIIVIDVS 64 +L PDERLR+V V + ++++ + M A G +G+AA Q+ QR+IVID Sbjct: 12 ILKHPDERLRQVCPDVTDFGSDLEARFAQLDAVMRAAPGGVGIAAPQIGWQQRMIVIDCR 71 Query: 65 EN-----RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 E+ + L + NP + G+ EGCLS+P+ A+V RA +++ D G Sbjct: 72 ESLRPCKNNGLLWMSNPVIESVEGKALGREGCLSVPDWVAMVERARSLQVSYDDVHGDRL 131 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 LE+ G A IQHE+DHL G LF+D Sbjct: 132 SLESTGFEARVIQHELDHLDGILFID 157 >UniRef50_Q9FV53 Peptide deformylase 1A, chloroplastic n=13 Tax=Viridiplantae RepID=DEF1A_ARATH Length = 259 Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 25/175 (14%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID--- 62 VLH E+ R+V P E + IQ+I+DDM + M G+GLAA Q+ + RIIV++ Sbjct: 80 VLH---EKAREV-DPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTK 135 Query: 63 ------------VSENRD-ERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVK 108 E R + +V++NP L E+S + + EGCLS+ RA V R +V Sbjct: 136 EYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVV 195 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 + DR GK E+ A G A +QHE DHL G L++D + P R + V+ LD Sbjct: 196 VTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVP----RTFRTVDNLD 246 >UniRef50_A9AZ24 Peptide deformylase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZ24_HERA2 Length = 211 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 22/170 (12%) Query: 1 MSVLQVLHIPDER----LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V +VL I D LR AK + + + +VDDM ETM G+G+AA QV + + Sbjct: 1 MAVRRVLQIEDPTDAVVLRAKAKRITSFDQSLAGLVDDMIETMREARGVGIAAPQVGVSR 60 Query: 57 RIIVIDVSENRDER-------------LVLINPELLEKSGETG-IEEGCLSIPEQRALVP 102 R++VI+ +E V++NPE+++ S ET ++EGCLS+P + VP Sbjct: 61 RVVVIEEPAQYEEHEDGTQTQIAPAVLYVMVNPEIIKASEETHMLQEGCLSLPGRYTKVP 120 Query: 103 RAEKVKIRALDRDGKPFELE----ADGLLAICIQHEMDHLVGKLFMDYLS 148 R + V I+ D G+ L D + QHE+DHL G +F D ++ Sbjct: 121 RNKWVTIKYYDLKGREQRLRHIPAEDYKVGHIAQHELDHLDGIMFTDRMT 170 >UniRef50_Q1RIR7 Peptide deformylase n=2 Tax=Rickettsia bellii RepID=Q1RIR7_RICBR Length = 195 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 19/166 (11%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M +L+++ P+ LR + PV ++++++ + M ETMY EEGIG++A QV R ++ Sbjct: 9 MPILKIIKTPNSLLRIKSLPVTIIDSQMKDFMKSMLETMYNEEGIGISAIQVGKPIRALI 68 Query: 61 IDVSENRD-----ERLVLINPELLEKSGETGI-EEGCLSIPEQRAL------VPRAEKVK 108 +D+ + + E +INPE+ S E I E CLSI ++ + V R + + Sbjct: 69 VDIPKEENDQIKREPFFIINPEVNYLSEEKVILNEDCLSIRKEDGIAFIIGDVERPKNIS 128 Query: 109 IRALDRDGKPFELEADG-------LLAICIQHEMDHLVGKLFMDYL 147 I +D +G EL +G + C+QHE+DHL G LF+D L Sbjct: 129 ISYIDLEGNSKELTCNGNNSDYDLWFSRCLQHELDHLDGILFIDRL 174 >UniRef50_C3J9U8 Peptide deformylase n=7 Tax=Bacteria RepID=C3J9U8_9PORP Length = 190 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 8/162 (4%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS-------EN 66 LR+VA+ + + ++ +M+++MY +GIGLAA Q+ R++VID S E Sbjct: 12 LREVAQDITPEYPNLSGLIAEMWKSMYESDGIGLAAPQIGKSIRLLVIDASPMAEYFPEC 71 Query: 67 RDERLVLINPELLEKSGETGIEE-GCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 +D + V+IN + E S ET EE GCLS+P V R +++ I LD P G Sbjct: 72 KDFKTVMINARITELSEETLSEEEGCLSLPGIHERVERPKEITIEYLDEQFTPQTRHLTG 131 Query: 126 LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 A +QHE DHL GKLF D++S L++ ++ K+ ++ KA Sbjct: 132 FAARVVQHEYDHLEGKLFTDHVSTLRKSLLKNKLARIASGKA 173 >UniRef50_D0J8Y3 Peptide deformylase n=2 Tax=Blattabacterium RepID=D0J8Y3_BLASP Length = 180 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 72/130 (55%), Gaps = 8/130 (6%) Query: 27 EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS---ENR----DERLVLINPELL 79 +IQ +V DMFET++ +GIGLAA Q+ + R+ +++ EN + + V IN +L Sbjct: 28 KIQELVKDMFETIHKVKGIGLAAPQIGKNIRLFIVETPYLLENGKDIDNYKEVFINARIL 87 Query: 80 EKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHL 138 + G E EGCLSIP V R V I D + K + G+ A IQHE DH+ Sbjct: 88 KIHGKEYEFNEGCLSIPGIMGYVKRKSHVSIEYYDHNWKKKKETLKGICARVIQHEYDHM 147 Query: 139 VGKLFMDYLS 148 GKLF+DY S Sbjct: 148 EGKLFIDYFS 157 >UniRef50_C6X128 Peptide deformylase n=5 Tax=Bacteroidetes RepID=C6X128_FLAB3 Length = 190 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 14/160 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + D LRK + + + ++ ++ +MF+TM + GIGLAA QV + R+ ++D Sbjct: 2 ILPIRAFGDAVLRKHCQEITKDYPDLDELIANMFDTMNSAHGIGLAAPQVGLDIRLFIVD 61 Query: 63 VS-------------ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVK 108 +S E +D + VLIN ++LE++GE EGCLSIP+ R V R E + Sbjct: 62 LSPLAEDEDYADIADELKDFKKVLINAKILEETGEEWKFNEGCLSIPDIREDVKRKETIV 121 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 I D + + A IQHE DH+ G LF D+LS Sbjct: 122 IEYYDENFVKHTDTFSDMRARVIQHEYDHIEGILFTDHLS 161 >UniRef50_A9EYX4 Peptide deformylase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EYX4_SORC5 Length = 203 Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 28/162 (17%) Query: 14 LRKVAKPV--EEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 LRK A PV EE+ + ++ +V M M G+GLAA Q+ + Q++IV++ SE R Sbjct: 14 LRKPAAPVPPEEIGTKRLKHLVSTMVSVMRKAPGVGLAAPQIGVDQQVIVLEDSEELMSR 73 Query: 71 L----------------VLINPEL---------LEKSGETGIEEGCLSIPEQRALVPRAE 105 L V+INP L +G EGCLS+P ALV R Sbjct: 74 LTPGQRAERGRVPFRLRVIINPTLRVLAPSLPDAAGAGRATFFEGCLSVPGYMALVERDL 133 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 V++ +D DGK EA G A +QHE+DHL G L++D + Sbjct: 134 SVEVSGVDEDGKEVRWEATGWPARILQHEVDHLRGTLYVDRM 175 >UniRef50_A2SPW1 Peptide deformylase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPW1_METLZ Length = 162 Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 7/155 (4%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVL 73 L +VA+PV+ + E+ I+D+M + G+GLAA QV I +R V++ D+ + Sbjct: 11 LAQVAEPVDTITPELLAILDEMVPMLKEHRGVGLAAPQVGIGKRFFVMNPG---DKVRRV 67 Query: 74 INPELLEKSGE--TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICI 131 INPE++ K+G + +EEGCLS+P V R ++ +R + G+ E E A Sbjct: 68 INPEIM-KTGNAFSEMEEGCLSVPGIHKKVRRPRRITVRYTNEAGELIEEELKDYPARVF 126 Query: 132 QHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 HE DHL G LF+D +SP+ ++ I +++E L RLK Sbjct: 127 LHEYDHLDGILFVDRISPIAKKMIAKQLEDL-RLK 160 >UniRef50_A7BDR6 Peptide deformylase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDR6_9ACTO Length = 212 Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 84/182 (46%), Gaps = 35/182 (19%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L + + L +VA PV+ +++E++ +V DM ETM+A G+GLAA QV + ++ V Sbjct: 1 MSILPICITGEPVLHRVADPVDSIDSELRDLVADMIETMHAAPGVGLAAPQVGVGAQVFV 60 Query: 61 ------------------IDVSENRDERLVL----INPEL---LEKSGETGI-------- 87 +D R VL +NP L + G I Sbjct: 61 WRYGGAGSFDAQYREVLQLDEGPARGFNTVLHGVVVNPTLDLVWDTEGAGAILPEEPDIA 120 Query: 88 --EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 EGCLS+P + R +R D DG E+ A G LA QHE DHL G L++D Sbjct: 121 LESEGCLSVPGYGYPLRRVLGAVLRGYDVDGNAIEVSARGWLARIFQHEYDHLQGTLYVD 180 Query: 146 YL 147 L Sbjct: 181 RL 182 >UniRef50_Q6MDT4 Peptide deformylase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDT4_PARUW Length = 156 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 8/136 (5%) Query: 21 VEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERL-------VL 73 + ++ +++++ DM ETM+ +GIGLAA QV + V V L V Sbjct: 1 MNHIDDALKQLIYDMVETMHTMKGIGLAAPQVHHSISLFVTCVPVKNKNGLWESGKDRVF 60 Query: 74 INPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQ 132 INP++L S ET EGCLSIP V R K+ ++A+D +G FE GL A Sbjct: 61 INPQILSMSEETQTFSEGCLSIPNLHMNVTRPAKITVQAVDLEGNLFEEIFTGLQATNFM 120 Query: 133 HEMDHLVGKLFMDYLS 148 HE DHL G L +DY S Sbjct: 121 HEYDHLNGILIIDYYS 136 >UniRef50_Q7NJV3 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF1_GLOVI Length = 227 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 87/164 (53%), Gaps = 20/164 (12%) Query: 2 SVLQVLHIPDERLRKVAKPV--EEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 V +++ D LR AKP+ +E+ +E IQ+++ M E M G+GLAA QV + ++ Sbjct: 44 GVYEIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQL 103 Query: 59 IVIDVSENRDERL----------------VLINPELLEKSGETGIE-EGCLSIPEQRALV 101 +VI+ ERL VLINP L + E+ + EGCLSIP + LV Sbjct: 104 VVIEDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLV 163 Query: 102 PRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 RA V++ ALD P + A G A +QHE+DHL G L +D Sbjct: 164 ARARVVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVD 207 >UniRef50_C0ZWJ9 Peptide deformylase n=2 Tax=Rhodococcus erythropolis RepID=C0ZWJ9_RHOE4 Length = 188 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 14/170 (8%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 VLH P A+PV E +++Q ++ DMF T A G GLAA Q+ + + + D ++ Sbjct: 22 VLHAP-------ARPVTEFGSDLQDLLADMFATNTAAHGAGLAAQQIGVDLAVFIYDCTD 74 Query: 66 --NRDERLVLINP--ELLEKSGETGIE--EGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 V+ NP +L E ++ EGCLS+P + R + R D+ G P Sbjct: 75 EVGTQRTGVVCNPVVDLPEAVDRQLVDDCEGCLSLPGAYTDLARPDFSTCRGNDQYGNPI 134 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI-RQKVEKLDRLKAR 168 E+ A G L C QHE DH+ G +F D L K++++ R E D+ A Sbjct: 135 EITAGGTLGRCFQHETDHINGIVFGDRLPTRKRKQLYRDHDEVSDQYTAH 184 >UniRef50_C7R2E5 Peptide deformylase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R2E5_JONDD Length = 215 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 16/153 (10%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV-SENRDE 69 D LR+ A V E + + ++V DM++TM G+GLAA Q+ + QRI V D E+ Sbjct: 10 DPVLRQRAAEVTEFDDALVQLVADMYDTMRVSNGVGLAAPQIGVGQRIFVFDAPDEDEQR 69 Query: 70 RLVLINPEL----------LEKSGETGIE-----EGCLSIPEQRALVPRAEKVKIRALDR 114 R V++NP L L+ G+ + EGCLS P R V++ D Sbjct: 70 RGVVVNPSLMIVQRPPRFALKGEGKRPPKSLTDVEGCLSFPGPDFEAKRHYAVRVTGWDE 129 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 G+P ++ +G A +QHE DHL G L++D L Sbjct: 130 HGEPVVIDGEGWFARVLQHEYDHLDGLLYVDRL 162 >UniRef50_C1XRQ6 Peptide deformylase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRQ6_9DEIN Length = 195 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 17/153 (11%) Query: 11 DERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI--------- 61 D LRK A V++ +EI R+ ++MFETM+ G+GLAA QV +R+ V Sbjct: 10 DPVLRKRASSVKDF-SEIPRLAENMFETMFEARGVGLAAPQVGRSERLFVFAEYVDAEDE 68 Query: 62 ------DVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRA-LVPRAEKVKIRALDR 114 D+ + V++NP + ++G+ EGCLSIP + VPR ++++ + Sbjct: 69 EEGEEADLKTRVKNQWVMVNPAITYRAGQQISTEGCLSIPGLYSDEVPRDLQIRVEYQNE 128 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 G+ E +G LA+ +QHE+DHL G LF + L Sbjct: 129 LGEKKTQEFEGYLAVVVQHELDHLDGTLFFERL 161 >UniRef50_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago truncatula RepID=Q2HVV8_MEDTR Length = 266 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 22/166 (13%) Query: 22 EEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID------------VSENRD 68 E+N++ IQ+I+D M M GI L+A ++ I RIIV++ V++ D Sbjct: 85 SEINSDKIQKIIDGMILVMRNAPGISLSAQKIGIPLRIIVLEEPKENLYNYTEEVNKIID 144 Query: 69 ER----LVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 R LV++NP+L KS +T + EGCLS+ +A+V R V++ DR G+P ++ A Sbjct: 145 RRPFDLLVILNPKLKIKSNKTFLFFEGCLSVHGFQAVVERYLDVEVEGFDRYGEPIKINA 204 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 G A +QHE DHL G L++D + P R + E ++ ARA Sbjct: 205 SGWHARILQHECDHLDGTLYVDKMVP----RTFRSWENINMSIARA 246 >UniRef50_Q4V5F8 IP07194p (Fragment) n=9 Tax=Drosophila RepID=Q4V5F8_DROME Length = 206 Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 20/157 (12%) Query: 9 IPDERLRKVAK--PVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 I D LR+ A+ P E++++ EI +I+D M + + + +G+AA QV I RIIV++ E Sbjct: 22 IGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGIPLRIIVMEFRE 81 Query: 66 NRDERL----------------VLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVK 108 + E+ V INPEL S + EGC+S+ A V R +KV+ Sbjct: 82 GKQEQFKPEIYEERKMSILPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVERYDKVR 141 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 IR + + G P E+E +G A QHE+DHL G ++MD Sbjct: 142 IRGIGKLGTPSEMELEGWNARIAQHEVDHLNGTIYMD 178 >UniRef50_P47352 Peptide deformylase n=2 Tax=Mycoplasma RepID=DEF_MYCGE Length = 216 Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 21/155 (13%) Query: 17 VAKPVEEVNAEIQRIVDDMFETMYAE---------------EGIGLAATQVDIHQRIIVI 61 + KP E VN I ++ + M A GIG+AA Q+ +++ I Sbjct: 41 INKPTEAVNFPIDEQIETCIKKMIAYVDASYDGKAQEYDIIPGIGIAANQIGYWKQLFYI 100 Query: 62 DVSE-NRDERLVLINPELLEKSGETGI---EEGCLSIPEQ-RALVPRAEKVKIRALDR-D 115 +++ N++++ +LINP+++++S EGCLS+ +Q + V R+E + I+ D + Sbjct: 101 HLNDLNKEKKCLLINPKIIDQSENKAFLESGEGCLSVKKQHKGYVIRSEWITIKGYDWFE 160 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 K ++A GL +C+QHE DHL G+ F ++PL Sbjct: 161 KKEITIKATGLFGMCLQHEFDHLQGRFFYQRINPL 195 >UniRef50_UPI000051A696 PREDICTED: similar to CG31373-PA n=1 Tax=Apis mellifera RepID=UPI000051A696 Length = 224 Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 17/141 (12%) Query: 27 EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERL--------------- 71 E Q+I+D ++E + + +GLAA Q+ + ++ V++++E E + Sbjct: 74 EFQKILDHLYELLKKNDTVGLAAPQIGLPWQLFVVEMTEESIEHIHPYIRKCYGITPHPL 133 Query: 72 -VLINPEL-LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAI 129 INP++ + S E E C SI A VPR ++V+I AL++ G+ F ++A+G LA Sbjct: 134 TYFINPKMNIINSEEVVHFETCASIDCYYAEVPRPKEVQIEALNKFGESFSMKAEGWLAR 193 Query: 130 CIQHEMDHLVGKLFMDYLSPL 150 I HEMDHL G L+ D + P Sbjct: 194 IIHHEMDHLKGHLYTDRMFPF 214 >UniRef50_B2UMC6 Peptide deformylase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UMC6_AKKM8 Length = 226 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 18/163 (11%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L +L LR+ PV +N +I +DDM ET+ A+ GIGLAA QV +++ I+ Sbjct: 14 ILDILQYGHPLLREECGPVVHINRDILSFLDDMQETL-AQGGIGLAAPQVGRPIQLVTIN 72 Query: 63 VSE-----------------NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAE 105 + +R L INP L + EGCLSI + A V R Sbjct: 73 IPSTDATTTWLEVDGCPTTLSRIMPLNFINPILHPFGKKVPYREGCLSITKVYANVMRRS 132 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 V+ DG+ ++ +GLLA C+QHE+DHL G LF D +S Sbjct: 133 CVRAVLTMMDGRTVTVKCNGLLARCLQHEVDHLHGGLFTDLVS 175 >UniRef50_B6KT47 Peptide deformylase, putative n=3 Tax=Toxoplasma gondii RepID=B6KT47_TOXGO Length = 353 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 7/149 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNA-EIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L VL P LR A P + A E + + D+ MY + G+GLAA QV + ++IV Sbjct: 184 TLDVLAAPHTLLRLPAHPEADWQAKETKELAKDLLAVMYRDGGVGLAAPQVGVSVQMIVW 243 Query: 62 ----DVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDG 116 DV E+ ER V +NP LL G + EGCLS+P A V R ++R +G Sbjct: 244 NPTGDVRESSRER-VFLNPRLLSLYGPLVSDVEGCLSVPGVFAPVERPLHARVRYTSLEG 302 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMD 145 E GL A +QHE+DHL G LF+D Sbjct: 303 IQREATLSGLEARVVQHEIDHLHGILFVD 331 >UniRef50_Q8YVH1 Peptide deformylase 2 n=25 Tax=Bacteria RepID=DEF2_ANASP Length = 179 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L ++ + + LR+ A VE + +A IQ+++DD+ T+ G+G+A+ QV R+ ++ Sbjct: 5 LLPIIQLGNPTLRQKAAWVENIHDATIQQLIDDLIATVAKANGVGIASPQVAQSYRLFIV 64 Query: 62 DVSENRD-------ERLVLINPELLEKSGETGIE--EGCLSIPEQRALVPRAEKVKIRAL 112 N E +INP+++ S E +E EGCLS+P R LVPR + +++ Sbjct: 65 ASRPNPRYPHAPEMEPTAMINPKIVGHSTEI-VEGWEGCLSVPGIRGLVPRHQAIEVEYT 123 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 DR G + +A QHE DHL G LF+D Sbjct: 124 DRYGNLQKQTLTDFVARIFQHEFDHLDGVLFID 156 >UniRef50_Q9RD27 Peptide deformylase 1 n=10 Tax=Actinomycetales RepID=DEF1_STRCO Length = 218 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 15/157 (9%) Query: 4 LQVLHIPDERLRKVAKPVEE--VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L ++ D LR+ A+P + A +R V+ + TM+A G+GLAA QV + R+ VI Sbjct: 24 LPIVAAGDPVLRRAAEPYDGQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVI 83 Query: 62 -DVSENRDE------RL-----VLINPEL-LEKSGETGIEEGCLSIPEQRALVPRAEKVK 108 D + DE R+ VL+NP +G EGCLS+P +A+V R +V+ Sbjct: 84 EDPAPVPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHAEVR 143 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 +RA D G+ + G A +QHE DHL G L++D Sbjct: 144 LRAHDEHGRAVDEVFAGWPARIVQHETDHLDGTLYLD 180 >UniRef50_D2B2I9 Peptide deformylase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B2I9_STRRD Length = 174 Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 7/151 (4%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMY-AEEGIGLAATQVDIHQRIIVIDV 63 +++ P L A+ V+ + + D+ TM A GLAA Q+ + R++ +DV Sbjct: 11 ELIAAPHPVLTARARAVDPADPRVVVAAADLLATMRRARHCTGLAAPQIGLDWRLLSVDV 70 Query: 64 SENRDER-----LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRA-LDRDGK 117 S + R LV+ NP L+ S EGCLS+P V RA ++ +R G Sbjct: 71 SLHPGARSCAGELVVANPRLVAASRWEPAREGCLSVPGLTGDVLRATRITVRGERPGTGA 130 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 P ++AD A CIQH++DHL G LF+D ++ Sbjct: 131 PVTIDADAFEARCIQHQLDHLDGVLFLDRVT 161 >UniRef50_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJN4_ACIBL Length = 208 Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 22/153 (14%) Query: 14 LRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID-------- 62 LR A+P+ E + EI R+++DM +T+ G+GLAA QV + ++ +I+ Sbjct: 25 LRTPAEPLAIKEIASREIARLIEDMRDTLEDAPGVGLAAPQVGVPIQLAIIEDRAEYSKD 84 Query: 63 -VSENRDER-------LVLINPELLEKSGETGIE--EGCLSIPEQRALVPRAEKVKIRAL 112 +E ER V+INP +L+ G++ ++ EGCLS+ A+VPR KV++ L Sbjct: 85 IPTEQLAERGRVPVPFHVIINP-VLKPLGKSQVDFFEGCLSVAGFIAVVPRYRKVRVTCL 143 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 D +G +EA G A +QHE+DHL G L++D Sbjct: 144 DENGAQRRIEASGWYARILQHEIDHLNGTLYVD 176 >UniRef50_B3CFT5 Peptide deformylase n=2 Tax=Bacteroides RepID=B3CFT5_9BACE Length = 186 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 22/169 (13%) Query: 14 LRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSEN------- 66 LRK + +E+ IQ +++ M++T+ +G GLAA Q+++ ++ +++ + Sbjct: 13 LRKECEDIEQNYPNIQEVIETMWQTLRDADGCGLAAPQINLPIKLFIVNSKDTYTYMSAK 72 Query: 67 -RDERLV---------LINPELL---EKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 R+ V IN +++ EK G EGCLSIP+ V R V IR D Sbjct: 73 EREHFFVEEDCGIEETFINAKIIAYSEKVWTAG--EGCLSIPDLYEEVTRPWSVTIRYQD 130 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + K G A IQHE +H GKL++D LSPL++Q I+ K+ ++ Sbjct: 131 NEFKEQNRTYYGYTARIIQHEFEHTQGKLYIDRLSPLRKQLIKNKLMRI 179 >UniRef50_A8HMF6 Predicted protein n=2 Tax=Chlamydomonas reinhardtii RepID=A8HMF6_CHLRE Length = 250 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 78/129 (60%), Gaps = 8/129 (6%) Query: 41 AEEGIGLAATQVDIHQRIIVIDVSENRDE---RLVLINPELLEKSG--ETGIEEGCLSIP 95 +++G+GLAA QV ++ R++V + RD+ +L+NPE++E+ G E G EEGCLS P Sbjct: 95 SDDGVGLAAPQVGVNVRLMVFN-PMGRDKPGNESILVNPEIVEQLGGKELG-EEGCLSFP 152 Query: 96 EQRALVPRAEKVKIRALDRDGKPFELE-ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 V R+ ++ ++ALD G+P +L D +A QHE DHL G LF D + P + Sbjct: 153 RIYGDVERSRQINVKALDATGQPVKLTLTDPWVARIFQHEFDHLQGVLFHDRMKPSVLET 212 Query: 155 IRQKVEKLD 163 +R ++ L+ Sbjct: 213 VRPELVALE 221 >UniRef50_Q7V8G6 Peptide deformylase 1 n=78 Tax=Bacteria RepID=DEF1_PROMM Length = 192 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 12/158 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V ++L + + +LRKV+ V++ + E I ++ D+ +T+ A +G GLAA Q+ + R++ Sbjct: 1 MAVKEILRMGNPQLRKVSNVVDDASDELIISLIKDLQDTVKAHQGAGLAAPQIGVPLRVV 60 Query: 60 VIDVSENRDE--------RLVLINPELLEKSG--ETGIEEGCLSIPEQRALVPRAEKVKI 109 + + +LINP L E G E GCLS+P R V R ++ Sbjct: 61 LFGGGGPNPRYPEAPSIPQTLLINPVLTPIGSDLEDGWE-GCLSVPGLRGKVSRWSRIHY 119 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 RAL+ DG E +G A IQHE DHL G LF D L Sbjct: 120 RALNEDGFEVEHCLEGFPARVIQHECDHLDGVLFPDRL 157 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q88RR1 Peptide deformylase 1 n=10 Tax=Proteobacteria Re... 261 7e-69 UniRef50_C1DFV8 Peptide deformylase n=4 Tax=Gammaproteobacteria ... 258 6e-68 UniRef50_Q7MGK6 Peptide deformylase 2 n=28 Tax=Gammaproteobacter... 257 8e-68 UniRef50_Q3J6U0 Peptide deformylase n=16 Tax=Proteobacteria RepI... 250 2e-65 UniRef50_Q5F5P6 Peptide deformylase n=409 Tax=cellular organisms... 246 2e-64 UniRef50_C1F541 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_... 244 1e-63 UniRef50_Q1QTJ5 Peptide deformylase n=8 Tax=Proteobacteria RepID... 244 1e-63 UniRef50_Q1QET1 Peptide deformylase n=121 Tax=Proteobacteria Rep... 240 2e-62 UniRef50_B5YIL7 Peptide deformylase n=41 Tax=Bacteria RepID=DEF_... 239 2e-62 UniRef50_A5EWL8 Peptide deformylase n=4 Tax=Proteobacteria RepID... 239 3e-62 UniRef50_Q65QF2 Peptide deformylase n=5 Tax=Gammaproteobacteria ... 237 1e-61 UniRef50_Q2NCT3 Peptide deformylase n=8 Tax=Sphingomonadales Rep... 237 1e-61 UniRef50_A3PMR8 Peptide deformylase n=5 Tax=Rhodobacteraceae Rep... 237 2e-61 UniRef50_B8D9R9 Peptide deformylase n=10 Tax=Gammaproteobacteria... 236 3e-61 UniRef50_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetip... 234 7e-61 UniRef50_Q7MCQ2 Peptide deformylase 1 n=57 Tax=Gammaproteobacter... 234 8e-61 UniRef50_B8ENG6 Peptide deformylase n=105 Tax=Proteobacteria Rep... 234 9e-61 UniRef50_B8JDM1 Peptide deformylase n=16 Tax=Bacteria RepID=B8JD... 234 9e-61 UniRef50_C9RL37 Peptide deformylase n=1 Tax=Fibrobacter succinog... 232 3e-60 UniRef50_Q1QH78 Peptide deformylase n=23 Tax=Alphaproteobacteria... 231 9e-60 UniRef50_O66847 Peptide deformylase n=3 Tax=Aquificaceae RepID=D... 228 4e-59 UniRef50_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychro... 228 4e-59 UniRef50_B1GZ10 Peptide deformylase n=1 Tax=uncultured Termite g... 228 8e-59 UniRef50_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteri... 227 1e-58 UniRef50_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine ba... 226 2e-58 UniRef50_D2NTP6 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothi... 226 2e-58 UniRef50_A5ILS1 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_... 226 2e-58 UniRef50_Q0BUB2 Peptide deformylase n=14 Tax=Bacteria RepID=Q0BU... 225 3e-58 UniRef50_A0LEJ7 Peptide deformylase n=2 Tax=Deltaproteobacteria ... 225 5e-58 UniRef50_Q0F0I6 Peptide deformylase n=1 Tax=Mariprofundus ferroo... 225 7e-58 UniRef50_A0LUE1 Peptide deformylase n=4 Tax=Actinomycetales RepI... 224 7e-58 UniRef50_Q023V6 Peptide deformylase n=2 Tax=Acidobacteria RepID=... 224 7e-58 UniRef50_D1PY14 Peptide deformylase n=2 Tax=Prevotella RepID=D1P... 224 9e-58 UniRef50_B3CMB1 Peptide deformylase n=11 Tax=Rickettsiales RepID... 223 2e-57 UniRef50_B9S632 Polypeptide deformylase, putative n=2 Tax=fabids... 222 3e-57 UniRef50_B0TGS8 Peptide deformylase n=14 Tax=Firmicutes RepID=DE... 222 3e-57 UniRef50_Q5GTG9 Peptide deformylase n=1 Tax=Wolbachia endosymbio... 222 5e-57 UniRef50_C0QI55 Peptide deformylase n=1 Tax=Desulfobacterium aut... 221 6e-57 UniRef50_C9P8G9 Peptide deformylase n=1 Tax=Vibrio metschnikovii... 221 7e-57 UniRef50_B8DMM6 Peptide deformylase n=12 Tax=Desulfovibrionales ... 221 9e-57 UniRef50_Q7VQC0 Peptide deformylase n=6 Tax=Gammaproteobacteria ... 220 1e-56 UniRef50_A9KM99 Peptide deformylase n=16 Tax=Bacteria RepID=DEF_... 220 1e-56 UniRef50_C3PG26 Peptide deformylase n=7 Tax=Corynebacterium RepI... 218 4e-56 UniRef50_C1QBP9 Peptide deformylase n=1 Tax=Brachyspira murdochi... 218 5e-56 UniRef50_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans ... 217 9e-56 UniRef50_Q826Q0 Peptide deformylase 2 n=20 Tax=Actinomycetales R... 217 9e-56 UniRef50_B8HH62 Peptide deformylase n=11 Tax=Actinobacteridae Re... 217 1e-55 UniRef50_D2R5E8 Peptide deformylase n=1 Tax=Pirellula staleyi DS... 216 2e-55 UniRef50_Q1Q7Q2 Peptide deformylase n=1 Tax=Candidatus Kuenenia ... 216 2e-55 UniRef50_Q8XJL2 Peptide deformylase 1 n=12 Tax=Clostridiales Rep... 216 2e-55 UniRef50_Q8NQ46 Peptide deformylase 1 n=8 Tax=Corynebacterium Re... 216 3e-55 UniRef50_B3L389 Formylmethionine deformylase, putative n=2 Tax=P... 215 3e-55 UniRef50_C9KJ27 Peptide deformylase n=1 Tax=Mitsuokella multacid... 215 3e-55 UniRef50_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae... 215 4e-55 UniRef50_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=4 Tax=co... 215 4e-55 UniRef50_Q8REF0 Peptide deformylase n=15 Tax=Fusobacterium RepID... 215 4e-55 UniRef50_A6L9R8 Peptide deformylase n=8 Tax=Bacteroidales RepID=... 215 5e-55 UniRef50_C4Z519 Peptide deformylase n=9 Tax=Clostridiales RepID=... 215 6e-55 UniRef50_C0QZQ2 Peptide deformylase n=1 Tax=Brachyspira hyodysen... 215 6e-55 UniRef50_B0RBE6 Peptide deformylase n=5 Tax=Actinobacteria (clas... 215 7e-55 UniRef50_C8WW76 Peptide deformylase n=2 Tax=Alicyclobacillus aci... 214 7e-55 UniRef50_C6BVK1 Peptide deformylase n=2 Tax=Desulfovibrio RepID=... 214 8e-55 UniRef50_D0XQM3 Peptide deformylase n=2 Tax=Alphaproteobacteria ... 214 1e-54 UniRef50_B2GGT8 Peptide deformylase n=8 Tax=Actinomycetales RepI... 213 1e-54 UniRef50_C4G2R8 Peptide deformylase n=6 Tax=Firmicutes RepID=C4G... 213 2e-54 UniRef50_C7NGP0 Peptide deformylase n=2 Tax=Micrococcineae RepID... 213 2e-54 UniRef50_A6Q676 Peptide deformylase n=5 Tax=Epsilonproteobacteri... 213 2e-54 UniRef50_Q3B2U9 Peptide deformylase n=11 Tax=Chlorobiaceae RepID... 213 2e-54 UniRef50_A5CF65 Peptide deformylase n=18 Tax=cellular organisms ... 213 2e-54 UniRef50_D1C7I8 Peptide deformylase n=1 Tax=Sphaerobacter thermo... 212 3e-54 UniRef50_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio pe... 212 3e-54 UniRef50_A8LE21 Peptide deformylase n=17 Tax=Actinomycetales Rep... 212 3e-54 UniRef50_C0Z4W7 Peptide deformylase n=4 Tax=Firmicutes RepID=C0Z... 212 4e-54 UniRef50_C1A607 Peptide deformylase n=1 Tax=Gemmatimonas auranti... 211 5e-54 UniRef50_B3QS23 Peptide deformylase n=1 Tax=Chloroherpeton thala... 211 7e-54 UniRef50_Q8I372 Formylmethionine deformylase, putative n=2 Tax=P... 211 8e-54 UniRef50_C9LLK7 Peptide deformylase n=1 Tax=Dialister invisus DS... 211 8e-54 UniRef50_A6C970 Peptide deformylase n=2 Tax=Planctomycetaceae Re... 211 9e-54 UniRef50_C4ZEV9 Peptide deformylase n=9 Tax=Clostridia RepID=DEF... 211 1e-53 UniRef50_Q17XD4 Peptide deformylase n=60 Tax=Epsilonproteobacter... 210 1e-53 UniRef50_A6DUA1 Peptide deformylase n=1 Tax=Lentisphaera araneos... 210 1e-53 UniRef50_Q6NH22 Peptide deformylase n=1 Tax=Corynebacterium diph... 210 2e-53 UniRef50_B5EMH5 Peptide deformylase n=4 Tax=Proteobacteria RepID... 209 3e-53 UniRef50_A4A7C9 Peptide deformylase n=1 Tax=Congregibacter litor... 209 3e-53 UniRef50_Q5VNN5 Peptide deformylase 1B, chloroplastic n=3 Tax=Or... 209 3e-53 UniRef50_D2PNQ8 Peptide deformylase n=2 Tax=Propionibacterineae ... 209 3e-53 UniRef50_B9MR36 Peptide deformylase n=97 Tax=Firmicutes RepID=DE... 209 3e-53 UniRef50_A8ZUK5 Peptide deformylase n=2 Tax=Desulfobacteraceae R... 208 5e-53 UniRef50_Q8NM41 Peptide deformylase 2 n=13 Tax=Actinomycetales R... 208 5e-53 UniRef50_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halop... 208 5e-53 UniRef50_D1VSE6 Peptide deformylase n=1 Tax=Peptoniphilus lacrim... 208 5e-53 UniRef50_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitre... 208 5e-53 UniRef50_B9L0C1 Peptide deformylase n=1 Tax=Thermomicrobium rose... 208 5e-53 UniRef50_C0WD89 Peptide deformylase n=1 Tax=Acidaminococcus sp. ... 208 6e-53 UniRef50_B0PFT9 Peptide deformylase n=1 Tax=Anaerotruncus coliho... 208 6e-53 UniRef50_A4RVA1 Peptide deformylase, organellar n=2 Tax=Eukaryot... 208 7e-53 UniRef50_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola ... 208 7e-53 UniRef50_C8PRC6 Peptide deformylase n=1 Tax=Treponema vincentii ... 207 1e-52 UniRef50_A3DCX4 Peptide deformylase n=24 Tax=Clostridia RepID=DE... 207 1e-52 UniRef50_C1MGI0 Peptide deformylase n=2 Tax=Viridiplantae RepID=... 207 1e-52 UniRef50_A5D1C0 Peptide deformylase n=3 Tax=Clostridia RepID=DEF... 206 2e-52 UniRef50_Q2GE16 Peptide deformylase n=8 Tax=Rickettsiales RepID=... 206 2e-52 UniRef50_Q1GDF5 Peptide deformylase n=18 Tax=Rhodobacterales Rep... 206 2e-52 UniRef50_C6V4P2 Peptide deformylase n=1 Tax=Neorickettsia ristic... 206 2e-52 UniRef50_A6TRW8 Peptide deformylase n=4 Tax=Clostridiales RepID=... 206 3e-52 UniRef50_B4DC77 Peptide deformylase n=2 Tax=Verrucomicrobia RepI... 206 3e-52 UniRef50_A5FGV5 Peptide deformylase n=59 Tax=cellular organisms ... 205 4e-52 UniRef50_B7RJW6 Peptide deformylase n=1 Tax=Roseobacter sp. GAI1... 205 6e-52 UniRef50_D1VET6 Peptide deformylase n=1 Tax=Frankia sp. EuI1c Re... 205 6e-52 UniRef50_D0LH18 Peptide deformylase n=2 Tax=Nannocystineae RepID... 205 7e-52 UniRef50_B5YF46 Peptide deformylase n=2 Tax=Dictyoglomus RepID=D... 205 7e-52 UniRef50_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chlorofle... 204 9e-52 UniRef50_B0VID6 Peptide deformylase n=1 Tax=Candidatus Cloacamon... 204 9e-52 UniRef50_Q3ZXA9 Peptide deformylase n=5 Tax=Dehalococcoides RepI... 204 1e-51 UniRef50_C5VIH1 Peptide deformylase n=2 Tax=Prevotella RepID=C5V... 204 1e-51 UniRef50_A3EQF2 Peptide deformylase n=3 Tax=Leptospirillum RepID... 204 1e-51 UniRef50_B1ZMD5 Peptide deformylase n=2 Tax=Verrucomicrobia RepI... 204 1e-51 UniRef50_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromo... 204 1e-51 UniRef50_A8U9S1 Peptide deformylase n=14 Tax=Lactobacillales Rep... 204 1e-51 UniRef50_Q1AVZ8 Peptide deformylase n=2 Tax=Bacteria RepID=Q1AVZ... 203 1e-51 UniRef50_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniph... 203 2e-51 UniRef50_B9XGP3 Peptide deformylase n=1 Tax=bacterium Ellin514 R... 203 2e-51 UniRef50_B3DUG9 Peptide deformylase n=1 Tax=Methylacidiphilum in... 203 2e-51 UniRef50_D0U631 Peptide deformylase n=2 Tax=uncultured actinobac... 203 2e-51 UniRef50_Q72H33 Peptide deformylase n=8 Tax=Deinococci RepID=DEF... 203 2e-51 UniRef50_D1ATH4 Peptide deformylase n=1 Tax=Anaplasma centrale s... 203 3e-51 UniRef50_A0Q456 Peptide deformylase n=18 Tax=Francisella RepID=A... 203 3e-51 UniRef50_C7R2E5 Peptide deformylase n=1 Tax=Jonesia denitrifican... 203 3e-51 UniRef50_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula balti... 202 3e-51 UniRef50_P73441 Peptide deformylase n=10 Tax=Cyanobacteria RepID... 202 3e-51 UniRef50_Q1CVW8 Peptide deformylase n=2 Tax=Cystobacterineae Rep... 202 3e-51 UniRef50_A1AXL8 Peptide deformylase n=4 Tax=Gammaproteobacteria ... 202 3e-51 UniRef50_B3E344 Peptide deformylase n=11 Tax=Bacteria RepID=B3E3... 201 5e-51 UniRef50_Q9FCA2 Peptide deformylase 2 n=4 Tax=Streptomyces RepID... 201 6e-51 UniRef50_Q8UF49 Peptide deformylase-like n=19 Tax=Rhizobiales Re... 201 7e-51 UniRef50_D2NSH9 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothi... 201 7e-51 UniRef50_C7CNZ7 Peptide deformylase n=24 Tax=Enterococcus RepID=... 201 8e-51 UniRef50_C1DV92 Peptide deformylase n=4 Tax=Hydrogenothermaceae ... 201 9e-51 UniRef50_Q2S316 Peptide deformylase n=2 Tax=Rhodothermaceae RepI... 200 1e-50 UniRef50_Q2J9M0 Peptide deformylase n=1 Tax=Frankia sp. CcI3 Rep... 200 1e-50 UniRef50_C3J9U8 Peptide deformylase n=7 Tax=Bacteria RepID=C3J9U... 200 1e-50 UniRef50_UPI0001C165F0 Polypeptide deformylase n=1 Tax=Raphidiop... 200 1e-50 UniRef50_A2BU25 Peptide deformylase n=50 Tax=cellular organisms ... 200 2e-50 UniRef50_C0ZE47 Peptide deformylase n=1 Tax=Brevibacillus brevis... 200 2e-50 UniRef50_Q9K4A0 Peptide deformylase 4 n=7 Tax=Streptomyces RepID... 199 4e-50 UniRef50_Q0RM09 Peptide deformylase n=4 Tax=Actinomycetales RepI... 198 4e-50 UniRef50_Q0BUX2 Peptide deformylase n=11 Tax=Alphaproteobacteria... 198 5e-50 UniRef50_D1R4B7 Peptide deformylase n=2 Tax=Parachlamydia acanth... 198 5e-50 UniRef50_A6W503 Peptide deformylase n=2 Tax=Actinomycetales RepI... 198 5e-50 UniRef50_D1B5G7 Peptide deformylase n=3 Tax=Synergistaceae RepID... 198 7e-50 UniRef50_Q3SKP4 Peptide deformylase n=6 Tax=Betaproteobacteria R... 198 8e-50 UniRef50_P94462 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF... 198 8e-50 UniRef50_A1SJX1 Peptide deformylase n=1 Tax=Nocardioides sp. JS6... 197 9e-50 UniRef50_D2N0L8 Peptide deformylase n=1 Tax=Campylobacter jejuni... 197 1e-49 UniRef50_D0WE84 Peptide deformylase n=1 Tax=Slackia exigua ATCC ... 197 1e-49 UniRef50_A3EQQ7 Peptide deformylase n=2 Tax=Leptospirillum sp. G... 197 1e-49 UniRef50_C7NDD2 Peptide deformylase n=4 Tax=Fusobacteriaceae Rep... 196 2e-49 UniRef50_C1ZAV5 Peptide deformylase n=1 Tax=Planctomyces limnoph... 196 2e-49 UniRef50_Q9XAQ2 Peptide deformylase 3 n=23 Tax=Actinomycetales R... 196 3e-49 UniRef50_Q8YVH1 Peptide deformylase 2 n=25 Tax=Bacteria RepID=DE... 196 3e-49 UniRef50_D1CBE7 Peptide deformylase n=1 Tax=Thermobaculum terren... 196 3e-49 UniRef50_B3CFT5 Peptide deformylase n=2 Tax=Bacteroides RepID=B3... 196 3e-49 UniRef50_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscu... 195 3e-49 UniRef50_B0SHH1 Peptide deformylase n=6 Tax=Leptospira RepID=DEF... 195 4e-49 UniRef50_A0LDD7 Peptide deformylase n=5 Tax=Proteobacteria RepID... 195 4e-49 UniRef50_Q9FV53 Peptide deformylase 1A, chloroplastic n=13 Tax=V... 195 5e-49 UniRef50_B2KD65 Peptide deformylase n=1 Tax=Elusimicrobium minut... 195 6e-49 UniRef50_C7H120 Peptide deformylase n=1 Tax=Eubacterium saphenum... 195 7e-49 UniRef50_A7G6C0 Peptide deformylase n=14 Tax=Clostridium RepID=A... 194 8e-49 UniRef50_C8W757 Peptide deformylase n=2 Tax=Atopobium RepID=C8W7... 194 8e-49 UniRef50_B9Z3A2 Peptide deformylase n=1 Tax=Lutiella nitroferrum... 194 1e-48 UniRef50_B3ETT4 Peptide deformylase n=1 Tax=Candidatus Amoebophi... 193 1e-48 UniRef50_A3JYF4 Peptide deformylase n=1 Tax=Sagittula stellata E... 193 1e-48 UniRef50_B2S3Z6 Peptide deformylase n=2 Tax=Treponema pallidum R... 193 2e-48 UniRef50_A2SPW1 Peptide deformylase n=1 Tax=Methanocorpusculum l... 193 2e-48 UniRef50_Q8G487 Peptide deformylase 2 n=33 Tax=Bacteria RepID=DE... 193 2e-48 UniRef50_B9ZK41 Peptide deformylase n=1 Tax=Thioalkalivibrio sp.... 192 3e-48 UniRef50_D1BVC6 Peptide deformylase n=1 Tax=Xylanimonas cellulos... 192 3e-48 UniRef50_Q83CV9 Peptide deformylase 1 n=4 Tax=Coxiella burnetii ... 192 4e-48 UniRef50_Q83GH8 Peptide deformylase n=2 Tax=Tropheryma whipplei ... 192 4e-48 UniRef50_D1YDB7 Peptide deformylase n=3 Tax=Propionibacterineae ... 192 4e-48 UniRef50_P63919 Peptide deformylase-like n=42 Tax=Alphaproteobac... 192 4e-48 UniRef50_C6X128 Peptide deformylase n=5 Tax=Bacteroidetes RepID=... 192 4e-48 UniRef50_A9AZ24 Peptide deformylase n=1 Tax=Herpetosiphon aurant... 191 8e-48 UniRef50_D1XJU9 Peptide deformylase n=5 Tax=Streptomyces RepID=D... 191 8e-48 UniRef50_Q253S4 Peptide deformylase n=14 Tax=Chlamydiaceae RepID... 191 8e-48 UniRef50_Q6MD22 Peptide deformylase n=1 Tax=Candidatus Protochla... 191 9e-48 UniRef50_A7BDR6 Peptide deformylase n=1 Tax=Actinomyces odontoly... 191 9e-48 UniRef50_A5FVG7 Peptide deformylase n=1 Tax=Acidiphilium cryptum... 191 1e-47 UniRef50_A7GFN2 Peptide deformylase n=12 Tax=Clostridiales RepID... 190 1e-47 UniRef50_A0PNK2 Peptide deformylase n=50 Tax=Actinomycetales Rep... 190 1e-47 UniRef50_A8Z5V9 Peptide deformylase n=3 Tax=Candidatus Sulcia mu... 190 2e-47 UniRef50_B5J0U4 Peptide deformylase n=1 Tax=Octadecabacter antar... 189 3e-47 UniRef50_C8WHT7 Peptide deformylase n=3 Tax=Coriobacteriaceae Re... 189 3e-47 UniRef50_A4WNU7 Peptide deformylase n=25 Tax=Rhodobacterales Rep... 189 3e-47 UniRef50_B2V9A0 Peptide deformylase n=4 Tax=Hydrogenothermaceae ... 189 4e-47 UniRef50_C7PQZ8 Peptide deformylase n=1 Tax=Chitinophaga pinensi... 189 4e-47 UniRef50_D1N2T1 Peptide deformylase n=1 Tax=Victivallis vadensis... 188 4e-47 UniRef50_Q0SDG2 Peptide deformylase n=2 Tax=Actinomycetales RepI... 188 6e-47 UniRef50_B5Y7H9 Peptide deformylase n=1 Tax=Coprothermobacter pr... 188 7e-47 UniRef50_Q92HU7 Peptide deformylase-like n=10 Tax=cellular organ... 187 9e-47 UniRef50_A9WHG7 Peptide deformylase n=5 Tax=Chloroflexaceae RepI... 187 1e-46 UniRef50_Q7V8G6 Peptide deformylase 1 n=78 Tax=Bacteria RepID=DE... 187 1e-46 UniRef50_A9DWU1 Peptide deformylase n=2 Tax=Rhodobacteraceae Rep... 187 1e-46 UniRef50_C0VXF2 Peptide deformylase n=2 Tax=Corynebacterium gluc... 187 1e-46 UniRef50_C6MYK8 Peptide deformylase n=1 Tax=Legionella drancourt... 187 2e-46 UniRef50_Q7NJV3 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF... 186 2e-46 UniRef50_C1XRQ6 Peptide deformylase n=1 Tax=Meiothermus silvanus... 186 3e-46 UniRef50_A9HS47 Peptide deformylase n=2 Tax=Alphaproteobacteria ... 186 3e-46 UniRef50_O51092 Peptide deformylase n=20 Tax=Borrelia RepID=DEF_... 186 3e-46 UniRef50_A3V199 Peptide deformylase n=1 Tax=Loktanella vestfolde... 185 7e-46 UniRef50_Q2JXI3 Peptide deformylase n=2 Tax=Synechococcus RepID=... 184 1e-45 UniRef50_A8LLB9 Peptide deformylase n=16 Tax=Rhodobacterales Rep... 184 1e-45 UniRef50_Q88EA7 Peptide deformylase 2 n=45 Tax=Bacteria RepID=DE... 184 1e-45 UniRef50_B8DUA2 Peptide deformylase n=4 Tax=Bifidobacterium anim... 183 2e-45 UniRef50_Q825U9 Peptide deformylase 3 n=6 Tax=Actinomycetales Re... 183 2e-45 UniRef50_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago tr... 183 2e-45 UniRef50_D0J8Y3 Peptide deformylase n=2 Tax=Blattabacterium RepI... 183 3e-45 UniRef50_C0ZWJ9 Peptide deformylase n=2 Tax=Rhodococcus erythrop... 181 5e-45 UniRef50_B6RGY0 Peptide deformylase 1A, chloroplastic n=3 Tax=Ma... 181 6e-45 UniRef50_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacte... 181 7e-45 UniRef50_C2D8V2 Peptide deformylase n=1 Tax=Atopobium vaginae DS... 181 8e-45 UniRef50_A4E6J7 Peptide deformylase n=3 Tax=Collinsella RepID=A4... 181 1e-44 UniRef50_B0MFU0 Peptide deformylase n=1 Tax=Anaerostipes caccae ... 181 1e-44 UniRef50_Q057D2 Peptide deformylase n=2 Tax=Buchnera aphidicola ... 180 1e-44 UniRef50_B5YLS0 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 180 2e-44 UniRef50_A3M399 Peptide deformylase n=16 Tax=Acinetobacter RepID... 179 3e-44 UniRef50_Q2RVK0 Peptide deformylase n=2 Tax=Rhodospirillales Rep... 179 4e-44 UniRef50_Q9RD27 Peptide deformylase 1 n=10 Tax=Actinomycetales R... 178 8e-44 UniRef50_B5G8K4 Peptide deformylase n=1 Tax=Streptomyces sp. SPB... 178 8e-44 UniRef50_A9G9J7 Peptide deformylase n=2 Tax=Myxococcales RepID=A... 178 8e-44 UniRef50_B4U7R8 Peptide deformylase n=1 Tax=Hydrogenobaculum sp.... 178 9e-44 UniRef50_A9EYX4 Peptide deformylase n=1 Tax=Sorangium cellulosum... 177 1e-43 UniRef50_Q8XJX0 Peptide deformylase 2 n=8 Tax=Clostridium perfri... 176 2e-43 UniRef50_D2MKZ1 Formylmethionine deformylase n=1 Tax=Candidatus ... 176 2e-43 UniRef50_UPI0001C31BDE peptide deformylase n=1 Tax=Conexibacter ... 175 4e-43 UniRef50_Q0EWE9 Peptide deformylase n=1 Tax=Mariprofundus ferroo... 175 4e-43 UniRef50_B6KT47 Peptide deformylase, putative n=3 Tax=Toxoplasma... 175 5e-43 UniRef50_C0N4F6 Peptide deformylase n=1 Tax=Methylophaga thiooxi... 175 6e-43 UniRef50_Q8PGV2 Peptide deformylase 1 n=12 Tax=Proteobacteria Re... 175 7e-43 UniRef50_B9JW15 Peptide deformylase n=4 Tax=Rhizobium/Agrobacter... 174 1e-42 UniRef50_Q6MDT4 Peptide deformylase n=1 Tax=Candidatus Protochla... 173 2e-42 UniRef50_Q28V78 Peptide deformylase n=2 Tax=Rhodobacteraceae Rep... 173 2e-42 UniRef50_D2PP12 Peptide deformylase n=1 Tax=Kribbella flavida DS... 173 2e-42 UniRef50_UPI000051A696 PREDICTED: similar to CG31373-PA n=1 Tax=... 173 2e-42 UniRef50_B3T9T4 Putative Polypeptide deformylase n=1 Tax=uncultu... 173 3e-42 UniRef50_UPI0000E48B64 PREDICTED: hypothetical protein n=1 Tax=S... 172 4e-42 UniRef50_A9B3X4 Peptide deformylase n=1 Tax=Herpetosiphon aurant... 170 1e-41 UniRef50_C6HZ73 Peptide deformylase n=1 Tax=Leptospirillum ferro... 170 2e-41 UniRef50_Q1RIR7 Peptide deformylase n=2 Tax=Rickettsia bellii Re... 170 2e-41 Sequences not found previously or not previously below threshold: >UniRef50_Q88RR1 Peptide deformylase 1 n=10 Tax=Proteobacteria RepID=DEF1_PSEPK Length = 168 Score = 261 bits (668), Expect = 7e-69, Method: Composition-based stats. Identities = 91/168 (54%), Positives = 128/168 (76%), Gaps = 1/168 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +AKPV E + +++++DDMFETMY GIGLAATQV++H++++V Sbjct: 1 MAILNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE+R E V INP + E + + G +EGCLS+P V R +V+++A DRDGKPF Sbjct: 61 MDLSEDRSEPRVFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 ELE +GLLA+C+QHE DHL GKLF+DYLS LK+ RI++K+EK R +A Sbjct: 121 ELECEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA 168 >UniRef50_C1DFV8 Peptide deformylase n=4 Tax=Gammaproteobacteria RepID=DEF_AZOVD Length = 168 Score = 258 bits (660), Expect = 6e-68, Method: Composition-based stats. Identities = 98/167 (58%), Positives = 129/167 (77%), Gaps = 1/167 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +AKP+E V+ I+R++DDMFETMYA GIGLAATQV++H+R++V Sbjct: 1 MAILTILEFPDPRLRTIAKPIETVDDGIRRLIDDMFETMYAAPGIGLAATQVNVHKRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE+++E V INPE + E +EGCLS+P V R +KV+IRALDRDG+PF Sbjct: 61 MDLSEDKNEPRVFINPEFEALTEELEPYQEGCLSVPGFYENVDRPQKVRIRALDRDGQPF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 EL A+GLLA+CIQHE DHL GKLF+DYLS LK+ RIR+K+EK R Sbjct: 121 ELVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQH 167 >UniRef50_Q7MGK6 Peptide deformylase 2 n=28 Tax=Gammaproteobacteria RepID=DEF2_VIBVY Length = 202 Score = 257 bits (659), Expect = 8e-68, Method: Composition-based stats. Identities = 122/168 (72%), Positives = 143/168 (85%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVLQVL PD+RLR VAKPVE+V EIQ+IVDDM ETMY EEGIGLAATQVDIHQRI+V Sbjct: 33 MSVLQVLTFPDDRLRTVAKPVEKVTPEIQKIVDDMIETMYDEEGIGLAATQVDIHQRIVV 92 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+SE+R+E +VLINPE+LEK GE GIEEGCLS+P RALVPRA +V ++ALDRDG F Sbjct: 93 IDISESRNEPMVLINPEILEKRGEDGIEEGCLSVPGARALVPRAAEVTVKALDRDGHEFT 152 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LEAD LLAICIQHE+DHL GKLF+DYLSPLK++RI+ K+ K+ R + Sbjct: 153 LEADDLLAICIQHELDHLQGKLFVDYLSPLKRKRIQDKLAKIKRFNEK 200 >UniRef50_Q3J6U0 Peptide deformylase n=16 Tax=Proteobacteria RepID=DEF_NITOC Length = 167 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 89/167 (53%), Positives = 122/167 (73%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +LH PD RLR+ A+PV V+ I+++ DDM ETMY GIGLAA QV++ ++++V Sbjct: 1 MAILNILHYPDPRLRRKAQPVAAVDKSIKKLADDMLETMYQAPGIGLAAVQVNVPKQVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+SE++ LVLINPE++ + G+ EEGCLS+PE V RA ++ + LDR+G+ E Sbjct: 61 IDISEDKSSPLVLINPEIVARQGKAESEEGCLSVPEIFEPVTRAAEITVHYLDREGQKQE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L+ LLA CIQHE+DHL GKLF+DY S LK+QRIR+K EK RL A Sbjct: 121 LQTQELLATCIQHELDHLEGKLFIDYFSTLKRQRIRKKAEKRQRLSA 167 >UniRef50_Q5F5P6 Peptide deformylase n=409 Tax=cellular organisms RepID=DEF_NEIG1 Length = 167 Score = 246 bits (630), Expect = 2e-64, Method: Composition-based stats. Identities = 94/164 (57%), Positives = 127/164 (77%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PDERL VAKPVE+V+ I+++V DMFETMY GIGLAATQVD+H+R++V Sbjct: 1 MALLNILQYPDERLHTVAKPVEQVDERIRKLVADMFETMYESRGIGLAATQVDVHERVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D++E+R E V INP ++EK GET EEGCLS+P V RAE+VK+ AL+ G+ F Sbjct: 61 MDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDAVTRAERVKVEALNEKGEKFT 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 LEADGLLAIC+QHE+DHL+G +F++ LS LKQ RI+ K++K + Sbjct: 121 LEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLKKRQK 164 >UniRef50_C1F541 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_ACIC5 Length = 170 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 78/166 (46%), Positives = 116/166 (69%), Gaps = 2/166 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + ++ PD L++ A+PV E N E++ +VDDMFE+MY +GIGLAA Q+ I +R+ V Sbjct: 1 MMIRPIVKYPDPVLQQPAEPVTEFNEELRALVDDMFESMYEAKGIGLAAPQIGISKRLTV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 ID+S EN DE++VLINPE++ + G EEGCLS+P+ R V RAEKV +RA + DG+ Sbjct: 61 IDLSFKENPDEKIVLINPEIIHREGRQYEEEGCLSLPDIREKVVRAEKVTVRAQNLDGEW 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 FE++ + LL+ QHE+DHL G LF+ +S LK+ + +++ K+ R Sbjct: 121 FEMDGEELLSRAFQHEIDHLDGVLFIFRISALKRDLVLRRIRKMQR 166 >UniRef50_Q1QTJ5 Peptide deformylase n=8 Tax=Proteobacteria RepID=DEF_CHRSD Length = 170 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 100/165 (60%), Positives = 126/165 (76%), Gaps = 1/165 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L +L PDERLR A PVE V+ E +++VDDM ETMY +GIGLAATQVD+H+R+IV Sbjct: 1 MAKLTILEFPDERLRTKAAPVETVDDETRKLVDDMLETMYDAQGIGLAATQVDVHRRVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +DVS++R + VLINPE E ++EGCLSIPE A VPRA +V ++ALDRDG P+ Sbjct: 61 MDVSDDRSQPRVLINPEYTPLGDEREPMQEGCLSIPEYYAEVPRALRVSLKALDRDGNPY 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 ELEADGLLA CIQHE DHL G LF+DYLSPLK+ R+ +K++K R Sbjct: 121 ELEADGLLAHCIQHEYDHLEGVLFVDYLSPLKRDRVLKKMQKRHR 165 >UniRef50_Q1QET1 Peptide deformylase n=121 Tax=Proteobacteria RepID=DEF_PSYCK Length = 184 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 86/169 (50%), Positives = 119/169 (70%), Gaps = 1/169 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +A PV+EV AEI+ ++ DM ETMY +GIGLAA+QVD H ++IV Sbjct: 1 MALLPILSYPDPRLRTIATPVKEVTAEIKTLITDMIETMYDAQGIGLAASQVDHHIQLIV 60 Query: 61 IDVSENRDERLVLINPELLEK-SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE++D V INP++ + EEGCLS+P+ V R KV+I ALD +G Sbjct: 61 MDLSEDKDSPRVFINPKVTPLVEEKQPYEEGCLSVPDVYDKVERPNKVRIEALDENGNKI 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + E +GLLA+CIQHEMDHL G +F+DYLS LKQ R R KV K+ +++ + Sbjct: 121 DEEVEGLLAVCIQHEMDHLNGVIFVDYLSRLKQTRARDKVRKVLKIREK 169 >UniRef50_B5YIL7 Peptide deformylase n=41 Tax=Bacteria RepID=DEF_THEYD Length = 165 Score = 239 bits (612), Expect = 2e-62, Method: Composition-based stats. Identities = 75/162 (46%), Positives = 112/162 (69%), Gaps = 2/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ PDE L+K A+ + E+N ++Q+++D+M ETMY GIGLAA QV + +R+IV Sbjct: 1 MAILEIKKYPDEVLKKKAETISEINGDLQKLIDNMIETMYNANGIGLAAPQVGVLKRLIV 60 Query: 61 IDVSENRDER--LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +D S + +VLINPE+ + GE EEGCLS+P + R E+V ++ LDR+GK Sbjct: 61 VDTSPREQNQSLIVLINPEITDSEGEILSEEGCLSLPGFTTRLKRKERVIVKGLDRNGKE 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 E+EA GLLA +QHE+DHL G L +D +SPLK++ R+K + Sbjct: 121 IEIEATGLLARALQHEIDHLDGILLIDKISPLKRELFRKKFK 162 >UniRef50_A5EWL8 Peptide deformylase n=4 Tax=Proteobacteria RepID=DEF_DICNV Length = 181 Score = 239 bits (611), Expect = 3e-62, Method: Composition-based stats. Identities = 80/181 (44%), Positives = 114/181 (62%), Gaps = 12/181 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L PD RLR A+PV + + IV +M+ETMY GIGLAA QV+I QR+IV Sbjct: 1 MAIYSILIHPDPRLRLPAQPVTHFDDALAEIVQNMYETMYHFHGIGLAAPQVNIQQRLIV 60 Query: 61 IDVSENRDE-----------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVK 108 +DV + E +LVL+NPE++++S E EEGCLS+P Q ALV R + Sbjct: 61 MDVPQRSAEEGEKAEQIPSDKLVLVNPEIVQRSEECQDYEEGCLSLPNQYALVTRPANIT 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +R D G E A GLL++CIQHE+DHL G LF+D+LS LK++R+ +K+ K + + Sbjct: 121 VRYQDITGATQERAAQGLLSVCIQHEIDHLNGGLFIDHLSRLKRERLEKKLAKSLKNTKK 180 Query: 169 A 169 + Sbjct: 181 S 181 >UniRef50_Q65QF2 Peptide deformylase n=5 Tax=Gammaproteobacteria RepID=DEF_MANSM Length = 171 Score = 237 bits (606), Expect = 1e-61, Method: Composition-based stats. Identities = 107/168 (63%), Positives = 134/168 (79%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL VL PDERL+ +A+PV E N E+Q +DDMFETMY EEGIGLAATQVD+H+R+I Sbjct: 1 MSVLNVLIYPDERLKTIAEPVTEFNDELQTFIDDMFETMYQEEGIGLAATQVDVHKRVIT 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID++ + E+LVLINPELL+ GETGIEEGCLS+P R VPR EKV ++AL+R G+ F Sbjct: 61 IDITGEKTEQLVLINPELLDGEGETGIEEGCLSLPGLRGFVPRKEKVTVKALNRQGEEFT 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 L ADGLLAICIQHE+DHL G +F DYLSPLK+ R+++K+ KL + +R Sbjct: 121 LHADGLLAICIQHEIDHLNGIVFADYLSPLKRNRMKEKLVKLQKQISR 168 >UniRef50_Q2NCT3 Peptide deformylase n=8 Tax=Sphingomonadales RepID=DEF_ERYLH Length = 194 Score = 237 bits (606), Expect = 1e-61, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 120/192 (62%), Gaps = 28/192 (14%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 M++ ++L +PD RL+ V++PV +E N +++++VDDMFETMYA GIGLAA QV + +R+ Sbjct: 1 MAIREILEVPDPRLKTVSEPVQPDEFNDDLKQLVDDMFETMYAAPGIGLAAIQVGVPKRV 60 Query: 59 IVIDVSEN-------------------------RDERLVLINPELLEKSGE-TGIEEGCL 92 +VID+ E +++ + INPE+++ + E + +EGCL Sbjct: 61 LVIDLQEPDMDAEPEECGHDHGDGEGAHKHYPVKNDPRIFINPEIIDPNEELSTYQEGCL 120 Query: 93 SIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 S+PE A V R + ++ D GK + + DGLLA C+QHEMDHL G LF+D+LS LK+ Sbjct: 121 SVPEIYADVDRPKTCTVKYQDLTGKTHQEDLDGLLATCLQHEMDHLEGILFIDHLSRLKK 180 Query: 153 QRIRQKVEKLDR 164 Q +K++K+ + Sbjct: 181 QMALKKLKKMRQ 192 >UniRef50_A3PMR8 Peptide deformylase n=5 Tax=Rhodobacteraceae RepID=A3PMR8_RHOS1 Length = 177 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 4/171 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +L PD RL+K+ PV ++ +++R+ DDM TMY GIGLAA QV + +R+IV+D Sbjct: 2 IRPILIHPDPRLKKICDPVGQITDDLRRLADDMLATMYDAPGIGLAAPQVGVVRRLIVLD 61 Query: 63 VSENRD---ERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 ++ D + ++NPE++ +S + EEGCLS+P A V R +VK+R DG+ Sbjct: 62 CNKESDGARRPVAMVNPEVVWRSEDVSTYEEGCLSLPNVFADVERPAEVKVRWTGLDGRE 121 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E + GL A C+QHE+DHL GKLF+DYL PLK+Q I +K+EK R +A Sbjct: 122 EEEQFAGLWATCVQHEIDHLDGKLFIDYLRPLKRQMITRKMEKFKRAQASG 172 >UniRef50_B8D9R9 Peptide deformylase n=10 Tax=Gammaproteobacteria RepID=DEF_BUCA5 Length = 173 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 90/168 (53%), Positives = 134/168 (79%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L++L+ PD RLR +AKPV+E+N +IQ+I +DM +TMY EEGIGLAATQV+I +IIV Sbjct: 1 MSLLKILYYPDIRLRILAKPVKEINKKIQKIANDMIDTMYQEEGIGLAATQVNIPLQIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ E + LVLINP++++K G+ IEEGCLSIPE +A +PR+ ++++A++ DG+ E Sbjct: 61 VNTMEQKKNNLVLINPKIIKKEGDISIEEGCLSIPEYQASIPRSNYIQVQAVNLDGEKIE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +EA +L+ICIQHE+DHL GKLF+DYLS K++RI++K EK+++ + Sbjct: 121 IEAKSILSICIQHEIDHLKGKLFIDYLSKFKRERIQKKFEKINKKNKK 168 >UniRef50_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP40_9BACT Length = 175 Score = 234 bits (599), Expect = 7e-61, Method: Composition-based stats. Identities = 75/161 (46%), Positives = 109/161 (67%), Gaps = 2/161 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+V PD+ LR A+PV+ ++ I ++D+M ETM+A G+GLAA QV I +R+IVID Sbjct: 2 ILEVKTFPDKVLRIKAEPVDSIDESITELLDNMVETMHARSGVGLAAPQVGISKRLIVID 61 Query: 63 VS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 S EN L +INPE++ GE EEGCLSIP + V RAEKV ++A+D +GKP+ Sbjct: 62 TSAGENEGMLLRVINPEIISAEGEQVGEEGCLSIPGEYEPVRRAEKVTVKAMDENGKPYT 121 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +EA+G LA QHE+DHL G LF+D L K+ +++ +++ Sbjct: 122 MEAEGFLARAFQHEIDHLDGVLFIDRLPSYKKDTLKKTIKR 162 >UniRef50_Q7MCQ2 Peptide deformylase 1 n=57 Tax=Gammaproteobacteria RepID=DEF1_VIBVY Length = 168 Score = 234 bits (599), Expect = 8e-61, Method: Composition-based stats. Identities = 86/169 (50%), Positives = 120/169 (71%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE-GIGLAATQVDIHQRII 59 M+VL++L PD RLR +K V +V A +Q ++DD+ ET+Y + G+GLAA QV + I+ Sbjct: 1 MAVLEILTAPDPRLRVQSKEVTDV-AAVQTLIDDLLETLYETDNGVGLAAPQVGREEAIV 59 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID+SENRDE LVL+NP+++ S + +EGCLS+P+ A V R V + ALDR+GK Sbjct: 60 VIDLSENRDEPLVLVNPKVVSGSNKEMGQEGCLSVPDYYADVERYTSVVVEALDRNGKEL 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +E LAI +QHE+DHL G LF+DYLSPLKQQ +KV+K ++L+AR Sbjct: 120 RIETSEFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHNKLRAR 168 >UniRef50_B8ENG6 Peptide deformylase n=105 Tax=Proteobacteria RepID=DEF_METSB Length = 196 Score = 234 bits (598), Expect = 9e-61, Method: Composition-based stats. Identities = 89/174 (51%), Positives = 125/174 (71%), Gaps = 6/174 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + ++ +PD+RLR VA+PV V++E++ ++DDM ETMY GIGLAATQ+ + +R+IV Sbjct: 1 MPLRPIIILPDKRLRLVARPVASVDSEVRALMDDMLETMYEAPGIGLAATQIAVDRRVIV 60 Query: 61 IDVSENRDE-----RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 +DV++ RD+ + L NPE+L S E + EEGCLSIPE V R EKV++ LDR Sbjct: 61 LDVAKRRDDSAKADPICLANPEILWASEELSSYEEGCLSIPEFYEEVFRPEKVRVGYLDR 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DG+ E+EADGLLA C+QHE+DHL G LF+D++S LK+ RI +K EK +L A+ Sbjct: 121 DGRRREIEADGLLATCLQHEIDHLNGVLFIDHISRLKRARIIKKFEKAAKLDAQ 174 >UniRef50_B8JDM1 Peptide deformylase n=16 Tax=Bacteria RepID=B8JDM1_ANAD2 Length = 185 Score = 234 bits (598), Expect = 9e-61, Method: Composition-based stats. Identities = 81/167 (48%), Positives = 120/167 (71%), Gaps = 2/167 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ PD L++VA PV+ V+ I+R++DDM ETMYA +G+GLAA Q+ + +R+IVID Sbjct: 2 VREIVIWPDPILKEVAHPVDRVDDGIRRLLDDMAETMYAADGVGLAAPQIAVKKRVIVID 61 Query: 63 VSENRDER--LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 S ++ + + L+NPE++ GE EGCLSIP + V R +V +RALD GKPFE Sbjct: 62 TSPRQEGQTLIHLVNPEIVRGEGELTYTEGCLSIPGEAEDVDRFARVWVRALDYHGKPFE 121 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 LEA+GLLA+ +QHE DHL G +F+D+LS LK++ IR++++KL +A Sbjct: 122 LEAEGLLAVALQHETDHLNGTVFVDHLSSLKRELIRKRMKKLKAQRA 168 >UniRef50_C9RL37 Peptide deformylase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL37_FIBSS Length = 179 Score = 232 bits (594), Expect = 3e-60, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 6/172 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + D LRK +P+ E+ E++++ DM ETMY G GLAA Q+ + R++V Sbjct: 1 MAILPIRIYGDPVLRKKCEPITEITPELRQLAKDMLETMYDAPGCGLAAPQIGKNIRLVV 60 Query: 61 ID---VSENRDERLVLINPELLEKSG--ETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ID E ++ NPE + +EGCLS+PE V R ++V +R D + Sbjct: 61 IDTAIPDEEEPRPYIMFNPEWEAEPDAKNVDYDEGCLSLPEIFCNVVRPDRVTVRFFDIN 120 Query: 116 GKPFELE-ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 G+ E+ +GL A CIQHE DHL G LF+D +S + + K+ K+ + Sbjct: 121 GEAQEIHNCEGLFARCIQHECDHLNGDLFVDKISTSDRTMNQSKLRKMAKET 172 >UniRef50_Q1QH78 Peptide deformylase n=23 Tax=Alphaproteobacteria RepID=DEF_NITHX Length = 175 Score = 231 bits (590), Expect = 9e-60, Method: Composition-based stats. Identities = 78/175 (44%), Positives = 115/175 (65%), Gaps = 7/175 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +++ +PD++LR V++P+E V EI+++ DDMFETMY GIGLA Q+ RII Sbjct: 1 MAIREIIILPDKQLRLVSRPIETVTPEIRKLADDMFETMYDAPGIGLAGIQIAQPLRIIT 60 Query: 61 IDVSENRDE------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALD 113 +D++ +E + INPE+L S E + EEGCLSIPE V R +V++R D Sbjct: 61 MDLARRDEEGELTPRPRIFINPEILSASEELSTYEEGCLSIPEYYEEVERPARVRVRFTD 120 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DGK E +A+G+ A CIQHE+DHL G LF+D++S LK+ R+ +K K +L A+ Sbjct: 121 LDGKVHEEDAEGIYATCIQHEIDHLNGVLFVDHISKLKRDRVVKKFTKAAKLAAK 175 >UniRef50_O66847 Peptide deformylase n=3 Tax=Aquificaceae RepID=DEF_AQUAE Length = 169 Score = 228 bits (584), Expect = 4e-59, Method: Composition-based stats. Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V ++ P+E L+K + V+ ++ E++ ++ DMF+TMY EG+GLAA Q+ + ++VID Sbjct: 2 VRDIVIYPNEILKKPTEKVDVIDKEVKNLIRDMFDTMYEAEGVGLAANQIGVPLSVMVID 61 Query: 63 VSENRDER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 S D LVLINPE+ E G+ +EGCLS P V R +KVK+ AL+ G+P Sbjct: 62 TSPKEDAPPLKLVLINPEIKEGEGKIKYKEGCLSFPGLSVEVERFQKVKVNALNEHGEPV 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 EL +G AI QHE+DHL G F+D L +++ +K +KL + + Sbjct: 122 ELTLEGFPAIVFQHELDHLKGITFVDRLKGWRRRMALEKYQKLLKSRK 169 >UniRef50_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychrophila RepID=DEF_DESPS Length = 169 Score = 228 bits (584), Expect = 4e-59, Method: Composition-based stats. Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 3/165 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ PD LRK + + ++ ++ +DM ETMY GIGLAA Q+ +++V Sbjct: 1 MAILKICTYPDPVLRKETVAITVFDEKLVKLTEDMAETMYDAPGIGLAAPQIGESLKLVV 60 Query: 61 IDVSENRD---ERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 + + D E +V+ NPE++EK EEGCLS+PE A+V R K+K+ D +G+ Sbjct: 61 VSTARREDSKQEYMVMANPEIVEKEESQVDEEGCLSVPELLAMVKRYRKIKVNYQDINGE 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 P + + A+ +QHE+DHL G LF+D+LS LK+ ++KV+K Sbjct: 121 PCSMTVEDRFAVVLQHEIDHLNGILFLDHLSSLKRNLYKKKVKKW 165 >UniRef50_B1GZ10 Peptide deformylase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=DEF_UNCTG Length = 168 Score = 228 bits (582), Expect = 8e-59, Method: Composition-based stats. Identities = 66/155 (42%), Positives = 90/155 (58%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++ D LRK A+ V E+N I+ + DM ETMY+ G+GLAA QV I R V Sbjct: 1 MAKLKIKKYGDPALRKRAEAVSEINEIIKELASDMLETMYSASGVGLAAPQVGILLRFCV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV N+ +V+INPE++ + EEGCLS P V R E + D +G E Sbjct: 61 IDVDPNKKSPIVMINPEIISGENKITAEEGCLSFPGFYGNVNRFENIIAGYTDLNGNRQE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 ++A LA +QHE+DHL KLF+DYL K++ I Sbjct: 121 IKAQNFLAKALQHEIDHLDAKLFIDYLPDWKRESI 155 >UniRef50_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJL6_BDEBA Length = 201 Score = 227 bits (579), Expect = 1e-58, Method: Composition-based stats. Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 18/177 (10%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 ++++L PD +LR+V++PV+ EI ++ +DM ETMY GIGLAA QV R++VID Sbjct: 2 IMKILTFPDPKLREVSQPVKTFGPEIAKLAEDMVETMYHANGIGLAAPQVGELVRMVVID 61 Query: 63 VSENRD------------------ERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRA 104 + + L+LINPE+++ G+T +EGCLSIP V R Sbjct: 62 TRPKDEKGRRYKYEEMTELEAAVKQPLILINPEIVKGEGKTTFDEGCLSIPGYYETVERY 121 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 ++++A D +GK + ++ DGLLAIC+QHEMDHL G LF+D+LS +K +I+ +++K Sbjct: 122 NYIEMKAFDVNGKEYIVKTDGLLAICMQHEMDHLEGTLFIDHLSFVKGNKIKNQIKK 178 >UniRef50_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine bacterium 313 RepID=Q6SHN7_9BACT Length = 185 Score = 226 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 76/182 (41%), Positives = 115/182 (63%), Gaps = 14/182 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++L P++ LR+ + V+EV+ ++Q++++DM ETMYA GIGLAA QV + +R+IV Sbjct: 1 MALRKILTEPNKLLREKSLTVKEVDEDLQKLMNDMLETMYAAPGIGLAAIQVGVPKRVIV 60 Query: 61 IDVS-------------ENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEK 106 +D+ + R + +NPE++ KS + EEGCLS+P Q A + R +K Sbjct: 61 LDIGWRDKPESTNDEKQDERKNPIYFVNPEIITKSTNNSTYEEGCLSVPGQFAEIDRPDK 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 I+ LD G+P EL A+G+ A CIQHE+DHL G LF+DYLS LK+ I +K+ K Sbjct: 121 CHIKYLDYYGQPKELMAEGMFATCIQHEIDHLEGILFIDYLSKLKKSMIVKKLAKQKEQL 180 Query: 167 AR 168 R Sbjct: 181 DR 182 >UniRef50_D2NTP6 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothia mucilaginosa RepID=D2NTP6_9MICC Length = 248 Score = 226 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 8/168 (4%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 ++ ++ + L + A PV E N E++ +V DM+ETM A G+GLAA Q+ + RI Sbjct: 60 AIRPIVIHGNPVLHRPAAPVTEFNDELKELVADMYETMDASNGVGLAAPQIGVGLRIFTY 119 Query: 62 DVSENRD--ERLVLINPELL------EKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 + R +INP L EEGCLS P + RAE V + LD Sbjct: 120 KMENEDGVPPRGCIINPVLTLGKISTADPDPYEEEEGCLSFPGYGFPLKRAEWVTVNGLD 179 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G P EA G A C+QHE DHL GKL+++ L+ ++++ V+K Sbjct: 180 EHGNPVHFEATGWFARCMQHETDHLDGKLYVNRLNKKWTGKMKKVVKK 227 >UniRef50_A5ILS1 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_THEP1 Length = 164 Score = 226 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 4/167 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ D LRK AKPV + + +++ ++ M ETMY +G+GLAA QV I QR V+D Sbjct: 1 MYRIRVFGDPVLRKRAKPVTKFDDNLEKTIERMIETMYHYDGVGLAAPQVGISQRFFVMD 60 Query: 63 VSENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 V + +INPE+LE ET + EEGCLS PE + R++++K+R + G+ E Sbjct: 61 VGNG---PVAVINPEILEIDPETEVAEEGCLSFPEIFVEIERSKRIKVRYQNTKGEYVEE 117 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +G A QHE DHL G L +D +SP K+ +R+K+ + R R Sbjct: 118 VLEGYAARVFQHEFDHLNGVLIIDRISPAKRLLLRKKLMDIARTVKR 164 >UniRef50_Q0BUB2 Peptide deformylase n=14 Tax=Bacteria RepID=Q0BUB2_GRABC Length = 205 Score = 225 bits (576), Expect = 3e-58, Method: Composition-based stats. Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 3/170 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L +L P + L+ A+PV +A I+ +V MF TMY GIGLAA Q+D R+ V+ Sbjct: 36 LLPILIAPHKTLKTRARPVTAGDASLIRDLVPRMFATMYKAPGIGLAAPQIDSLLRLAVV 95 Query: 62 DV-SENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DV +++ LVLINP+++ +S E EEGCLS+P Q A V R ++K+R D DG Sbjct: 96 DVSPDDQKAPLVLINPDIIARSEEMATREEGCLSLPNQYADVTRPARIKLRYEDLDGSRR 155 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E+EAD LLA CIQHE+DHL G LF+D+LS LK+ + +++ K R + Sbjct: 156 EMEADDLLATCIQHEIDHLDGILFVDHLSTLKRNMLMRRLAKEQRQNSGG 205 >UniRef50_A0LEJ7 Peptide deformylase n=2 Tax=Deltaproteobacteria RepID=DEF_SYNFM Length = 170 Score = 225 bits (574), Expect = 5e-58, Method: Composition-based stats. Identities = 68/155 (43%), Positives = 100/155 (64%), Gaps = 2/155 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + PD LR+ A VE ++ + +++DDM ETMY GIGLAA QV +IV Sbjct: 1 MAILDICTYPDPILRQKAASVENIDEALIKLIDDMTETMYEAPGIGLAANQVGRSLSLIV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +D+ + +VLINP+++ GE EEGCLS+PE + V R +V +R RDGK Sbjct: 61 VDLQRQDEEHGLIVLINPQIVATQGEITWEEGCLSVPEYFSAVKRHAEVVVRGYGRDGKE 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 E++A GLLA+ +QHE+DHL G+LF+D L+P+ + Sbjct: 121 MEIQAGGLLAVALQHEIDHLEGRLFIDRLNPITRD 155 >UniRef50_Q0F0I6 Peptide deformylase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0I6_9PROT Length = 180 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 76/179 (42%), Positives = 106/179 (59%), Gaps = 15/179 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V ++L PD+RL +V++PVE ++ E++ ++ DM +TMY G+GLAA QV RI Sbjct: 1 MAVREILIHPDDRLVQVSRPVEFPLSDEVKELIRDMADTMYDAPGVGLAAPQVGELLRIA 60 Query: 60 VID-------------VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAE 105 V D + E V INPE L KS E EEGCLS+PE V R Sbjct: 61 VTDTVWRDKEVRHDGDLPGGHRELKVWINPEFLWKSDEMETWEEGCLSVPETWGDVSRPA 120 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 +++R D G E + DG A+ +QHE DHL GKLF+DYLSPLK++ I +K++KL + Sbjct: 121 ALRLRWFDEHGVQHEQDFDGFQAVALQHEFDHLDGKLFIDYLSPLKRRMITKKMKKLYK 179 >UniRef50_A0LUE1 Peptide deformylase n=4 Tax=Actinomycetales RepID=DEF_ACIC1 Length = 180 Score = 224 bits (573), Expect = 7e-58, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 3/163 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + D LR A+PV + + E++ ++ D+ ETM G+GLAA Q+ + R+ V Sbjct: 1 MAVRPIRLFGDPVLRTPAEPVTDFDKELRVLIKDLIETMQDAPGVGLAAPQIGVSLRVFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 DV L+NP L + +EGCLS+P + RA++ + + G+P Sbjct: 61 YDVDGVVGH---LVNPSLDLSEEQQDGDEGCLSLPGLSYPLKRAKRAVAKGFNEFGEPVI 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 LE LLA C+QHE DHL G LF+D L P +++ + + + + Sbjct: 118 LEGSDLLARCVQHETDHLDGVLFIDRLDPEQRKLAMRAIREAE 160 >UniRef50_Q023V6 Peptide deformylase n=2 Tax=Acidobacteria RepID=Q023V6_SOLUE Length = 171 Score = 224 bits (573), Expect = 7e-58, Method: Composition-based stats. Identities = 73/165 (44%), Positives = 108/165 (65%), Gaps = 3/165 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVN-AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 V ++ D L + A V E + E+ + +DDMFE+MYA +G+GLAA Q+ + ++I VI Sbjct: 2 VYPIVKFGDPVLEREADTVTEFDTPELHKFLDDMFESMYAAKGVGLAAPQIGVSKKIAVI 61 Query: 62 DVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DVS EN D++LV+INP++L+ G+ EEGCLSIP R V RA V IRA + G+ F Sbjct: 62 DVSNGENADDKLVIINPKILKIDGKQEGEEGCLSIPGFREQVRRARCVTIRAQNAKGEEF 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E + LLA HE DHL G+L++ ++S LK+ +++K++KL R Sbjct: 122 EKTGEDLLARAFLHETDHLYGRLYITHISALKRDLMKRKIKKLQR 166 >UniRef50_D1PY14 Peptide deformylase n=2 Tax=Prevotella RepID=D1PY14_9BACT Length = 187 Score = 224 bits (573), Expect = 9e-58, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 101/174 (58%), Gaps = 10/174 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI- 61 +L + LRKVA+ + + +++DDMFETM A G+GLAA Q+ R++VI Sbjct: 2 ILPIYTYGHPVLRKVAQDIPTDYPGLSQLIDDMFETMDASSGVGLAAPQIGKSVRVVVIN 61 Query: 62 ------DVSENRDERLVLINPELLE---KSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 D E D R INP ++E KS + +EEGCLS+P V R +++++ L Sbjct: 62 LDVLKEDYPEYADFRHAYINPHIIEVDKKSEKVSMEEGCLSVPGLSEKVVRYSRIRVQYL 121 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 D + +P + +G LA +QHE DHL G +++D ++PL++Q IR K++ + + K Sbjct: 122 DEELQPHDEWVEGYLARVMQHEFDHLEGVMYVDRITPLRKQLIRNKLKGIMQGK 175 >UniRef50_B3CMB1 Peptide deformylase n=11 Tax=Rickettsiales RepID=DEF_WOLPP Length = 179 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 11/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS L ++ PDERL A V ++ +I+ +V+DMFETMY EG+GLAA QV + +RI + Sbjct: 1 MSKLPIVIAPDERLTTRASEVIDITDKIKELVNDMFETMYYAEGLGLAAVQVGVLKRIFI 60 Query: 61 IDVSENRDE----------RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKI 109 +DV + E + +INPE+ E SGE I +EGCLSIPEQ + R + + + Sbjct: 61 MDVQPEKAEDGPAGYESTGKFCMINPEITELSGEQVILKEGCLSIPEQSHEIKRPKYLTV 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + + + + L+A G LA CIQHE+DHL G L++ +LS LK +K +K+ R Sbjct: 121 KYKNLNNEEQTLKASGWLARCIQHELDHLNGILYVRHLSKLKYDMAMKKAQKVKR 175 >UniRef50_B9S632 Polypeptide deformylase, putative n=2 Tax=fabids RepID=B9S632_RICCO Length = 282 Score = 222 bits (568), Expect = 3e-57, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LR+ K ++ + ++++VD+MF+ MY +GIGL+A QV I+ +++V + Sbjct: 90 LKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP 149 Query: 64 --SENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 E +VLINP L + S + EGCLS P A V R E VKI A D +G F Sbjct: 150 VGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFT 209 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + GL A QHE DHL G LF D ++ IR +++ L++ Sbjct: 210 VNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEK 253 >UniRef50_B0TGS8 Peptide deformylase n=14 Tax=Firmicutes RepID=DEF_HELMI Length = 151 Score = 222 bits (568), Expect = 3e-57, Method: Composition-based stats. Identities = 67/147 (45%), Positives = 98/147 (66%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++L + D LR+ AKPV N+ + R++DDMF+TM A G+GLAA Q+ I +R+ V Sbjct: 1 MAVYEILKMGDPVLREKAKPVTRFNSNLGRLIDDMFDTMAAARGVGLAAPQIGIGKRVCV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++V + R E L+NPE++E GE EGCLSIP+ V R ++V+++A DR G+ F Sbjct: 61 VEVGKRRFE---LVNPEIIEAEGEQCDAEGCLSIPDYTGRVKRFQRVRVKAQDRKGETFI 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 E LLA+ QHE+DHL G LF+D + Sbjct: 118 AEGTDLLAVAFQHEIDHLDGILFVDRV 144 >UniRef50_Q5GTG9 Peptide deformylase n=1 Tax=Wolbachia endosymbiont strain TRS of Brugia malayi RepID=DEF_WOLTR Length = 179 Score = 222 bits (566), Expect = 5e-57, Method: Composition-based stats. Identities = 75/179 (41%), Positives = 103/179 (57%), Gaps = 11/179 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M L ++ PDERL A V +N +I+ +V+DMFETMY EG+GLAA Q+ + +RI V Sbjct: 1 MPKLSIVVAPDERLTTRASEVTGINDKIKELVNDMFETMYNAEGLGLAAVQIGVLKRIFV 60 Query: 61 ID----------VSENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKI 109 +D V + +INPE+ E S E I +EGCLSIPEQ + R + + + Sbjct: 61 MDIQLEDIKGEPVGYESTGKFCMINPEITELSDEQVILKEGCLSIPEQSHEIRRPKYLTV 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + D + K L+A G LA CIQHE+DHL G L++ +LS LK +K EK R R Sbjct: 121 KYKDLNNKEQTLKASGWLARCIQHELDHLNGILYIRHLSKLKYDMAMKKAEKFKRHYER 179 >UniRef50_C0QI55 Peptide deformylase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DEF_DESAH Length = 174 Score = 221 bits (565), Expect = 6e-57, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 8/169 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ P L K A VE ++ + ++V+DM ETM+ G+GLAA QV +RIIV Sbjct: 1 MALLEIYQYPAAVLLKKALQVETIDDTVIKLVNDMGETMFEAPGVGLAAPQVGQSRRIIV 60 Query: 61 IDV-------SENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRAL 112 + +E+ E LINPE++ SG E E CLS+P+ V R E V +R L Sbjct: 61 YNPQAGSSNANEDTKEFKALINPEIIASSGSIVSENEACLSVPDYSCNVKRFETVTVRGL 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 + +GK E +A GLLA+ +QHE+DHL G L++D +S LK+ ++KV K Sbjct: 121 NLEGKKLEFDAQGLLAVIMQHEIDHLDGILYIDRISTLKRNMYKKKVRK 169 >UniRef50_C9P8G9 Peptide deformylase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8G9_VIBME Length = 171 Score = 221 bits (565), Expect = 7e-57, Method: Composition-based stats. Identities = 76/169 (44%), Positives = 120/169 (71%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE-GIGLAATQVDIHQRII 59 M+VL++L PD RL+ A+ V+++ +Q+++DDM ET+Y+ + GIGLA+ QV + ++ Sbjct: 1 MAVLEILTAPDPRLKITAEKVQDI-ESVQKLIDDMLETLYSTDNGIGLASVQVGRKEAVV 59 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +ID+S+NRD+ L+LINPE++ S + +EGCLS+P+ A V R V + ALDR G+ Sbjct: 60 IIDLSDNRDQPLILINPEVVSGSNKALGQEGCLSVPDYYAEVERYTSVVVSALDRTGQRI 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +E+D LAI +QHE+DHL G LF+DY+SPLK+Q +KV+K + ++ Sbjct: 120 TIESDDFLAIVMQHEIDHLSGNLFIDYISPLKRQMAMKKVKKYVKSHSQ 168 >UniRef50_B8DMM6 Peptide deformylase n=12 Tax=Desulfovibrionales RepID=B8DMM6_DESVM Length = 184 Score = 221 bits (564), Expect = 9e-57, Method: Composition-based stats. Identities = 73/169 (43%), Positives = 107/169 (63%), Gaps = 3/169 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +VL PD RL + + E+ EI+++ DM ETMY ++GIGLAA QV H R+IV+D Sbjct: 2 IREVLQYPDPRLAVECEDITEITDEIRQLAADMAETMYRQDGIGLAAPQVGEHCRLIVVD 61 Query: 63 V--SENRDERLVLINPELLEKSGETGIEEGCLSIPE-QRALVPRAEKVKIRALDRDGKPF 119 V E R+ + +NP L + EEGCLS+P RA V R++ V++ A D DG Sbjct: 62 VSGPEKREALMTFVNPRLELTGDKVDSEEGCLSVPGGYRATVTRSDTVRLTARDLDGNEV 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 ++ADGLLA+C+QHE+DHL G LF+D++S LK+ +V+K+ + R Sbjct: 122 CMDADGLLAVCLQHEVDHLKGTLFIDHISRLKRTLYDSRVKKMQKNAPR 170 >UniRef50_Q7VQC0 Peptide deformylase n=6 Tax=Gammaproteobacteria RepID=DEF_BLOFL Length = 175 Score = 220 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 92/163 (56%), Positives = 129/163 (79%), Gaps = 1/163 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+LQ+L+ PD+RLRK+A+ V ++ + ++I+ DMFETMY ++GIGLAATQVDIHQ+IIV Sbjct: 1 MSILQMLYYPDQRLRKIARSVSIISHDTKKIISDMFETMYFQQGIGLAATQVDIHQKIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ID++ N +RLV INP +++K G EGCLSIP+ RA VPR++ + +++LD +G F Sbjct: 61 IDLNNNIQKRLVFINPCIIKKIGTITHIIEGCLSIPKIRASVPRSQNIIVQSLDENGNNF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 E+EA LL++CIQHE+DHL+GKLF+DYLSP K QRI +K+ K Sbjct: 121 EMEATDLLSVCIQHEIDHLLGKLFIDYLSPFKIQRIHKKINKW 163 >UniRef50_A9KM99 Peptide deformylase n=16 Tax=Bacteria RepID=DEF_CLOPH Length = 163 Score = 220 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 98/148 (66%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ + + D L K +K +EEV +I ++DDM +TMY G+GLAA QV + +R++V Sbjct: 1 MAKRNIRIMGDSILNKTSKVIEEVTPKIDTLIDDMLDTMYDAGGVGLAAPQVGVLKRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDVS +E ++LINPE++ GE +EGCLS+P + +V R VK++A DR KPFE Sbjct: 61 IDVSLEGNEPIILINPEIISTDGEQTGDEGCLSLPGKAGIVTRPNYVKVKAYDRHMKPFE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLS 148 +E +GLLA HE+DHL G L+++ ++ Sbjct: 121 VEGEGLLARAFCHEIDHLDGILYVEKVN 148 >UniRef50_C3PG26 Peptide deformylase n=7 Tax=Corynebacterium RepID=C3PG26_CORA7 Length = 169 Score = 218 bits (558), Expect = 4e-56, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V D L A+ + E ++R+ DM ETM G+GLAA Q+ + +RI V Sbjct: 1 MTVREVRLYGDPVLTTRAEEITEFGPSLERLAQDMLETMEDAGGVGLAANQIGVTKRIFV 60 Query: 61 IDVSENRDE-RLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D S + R +INPE E + EGCLSIP R V++R D G+P Sbjct: 61 FDCSHFQHGLRGAVINPEWEAVGEEMQLGTEGCLSIPGISQPTERFSTVRLRGYDPQGRP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 + A GL+A CIQHE DHL G LF+ LS ++ + + + + + Sbjct: 121 VSMLASGLMARCIQHETDHLDGVLFLQRLSDELRKESMKTIRQAEWFNS 169 >UniRef50_C1QBP9 Peptide deformylase n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBP9_9SPIR Length = 189 Score = 218 bits (557), Expect = 5e-56, Method: Composition-based stats. Identities = 71/173 (41%), Positives = 114/173 (65%), Gaps = 6/173 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +++ DERL++V++ +E+++ EI ++DDMFETMY E G+GLAA Q+ I +R+IVI Sbjct: 2 LRELVIYGDERLQQVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGILKRLIVIS 61 Query: 63 VSENRDE-----RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDG 116 V + DE +L LINPE++ E I EEGCLS PE R V R +++K++ LD++G Sbjct: 62 VPDFDDETKPDFKLALINPEIIWHGEEKEILEEGCLSFPEIRDDVARYKEIKVKYLDKEG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LEA+G +A +QHE+DH G F+D L +++R++++++ L R Sbjct: 122 NEQILEAEGYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKDLRNNTVRG 174 >UniRef50_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans RepID=Q7XYP8_BIGNA Length = 315 Score = 217 bits (555), Expect = 9e-56, Method: Composition-based stats. Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 4/170 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L V+ PD RLR + + E +Q + D+MF+ MY ++G GLAA QV I+ R++V + Sbjct: 122 LNVIKYPDPRLRTENEKITEFGKPLQELADEMFDVMYDDDGCGLAAPQVGINYRLMVFNP 181 Query: 64 SENR---DERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +R D +VL NPE++ E EGCLS P R V R KV IRA D G+ Sbjct: 182 QGDRRKKDTEMVLANPEIISSGEEKDWFREGCLSFPGIRGQVERPTKVLIRAQDVKGEDI 241 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E E +G A QHE DHL G LF D + + I K+ L+ A Sbjct: 242 EFELEGFTARVFQHEYDHLSGTLFHDRMPDKEVAEIHAKLVTLEDNFVEA 291 >UniRef50_Q826Q0 Peptide deformylase 2 n=20 Tax=Actinomycetales RepID=DEF2_STRAW Length = 186 Score = 217 bits (555), Expect = 9e-56, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 3/170 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V + + D L + V + E+ R+V+DMF TMYA G+GLAA Q+ + R+ V D Sbjct: 13 VRPLALLGDPVLHAPCEEVTDHGPELARLVEDMFATMYAANGVGLAANQIGVPLRVFVYD 72 Query: 63 VSENRDERLV--LINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ D R V ++NP L+E G EGCLS+P A R ++ + DG+P Sbjct: 73 CPDDEDVRHVGHVVNPRLIEADGVVLRGPEGCLSLPGLEAGTERYDRAVVEGFTTDGEPV 132 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + G A C+QHE DHL G +++D +S + +R+ ++ + + RA Sbjct: 133 RVLGTGWFARCLQHECDHLDGGVYVDRVSGWRHRRVMRQAARAPWNRQRA 182 >UniRef50_B8HH62 Peptide deformylase n=11 Tax=Actinobacteridae RepID=B8HH62_ARTCA Length = 204 Score = 217 bits (554), Expect = 1e-55, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + I D LR VA PV E E+ ++V DM ETM +G GLAA Q+ + +R+ Sbjct: 1 MAILNIRIIGDPVLRTVADPVTEFGPELAKLVADMTETMEDVDGAGLAAPQIGVSKRVFT 60 Query: 61 IDVSENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + +INP L + EGCLSIP V R ++ +D G P Sbjct: 61 YRIDGVEGH---IINPVLENSDDYQPDHVEGCLSIPGLGFPVRRFRATRVTGVDMHGNPV 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 LE +G+LA C QHE DHL G L+ D L ++ + + Sbjct: 118 SLEGEGMLARCFQHENDHLDGVLYTDRLEGEDRKAALRSIRN 159 >UniRef50_D2R5E8 Peptide deformylase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5E8_9PLAN Length = 222 Score = 216 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 2/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 LQ++ P LRKVAKP++ V+AE++ +V MF+ MY +GIGLAA QVD+ R+ VI++ Sbjct: 31 LQIITYPHPTLRKVAKPIKRVDAELRAMVAQMFDLMYEAKGIGLAANQVDLPLRLFVINL 90 Query: 64 S--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + + + E LV INP L G EEGCLS+P V R + V++ A + G+ Sbjct: 91 TAEKGKGEELVFINPVLSHPKGSAEAEEGCLSLPGVYGQVVRPKTVQVNAYNLQGQEISA 150 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E GLLA CIQHE DHL G +F D +S + + ++++ + Sbjct: 151 EVGGLLARCIQHENDHLDGVMFPDRMSESSRVELGGELQEFE 192 >UniRef50_Q1Q7Q2 Peptide deformylase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7Q2_9BACT Length = 170 Score = 216 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 99/165 (60%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 + ++ P LR+ AKP+ E+NA++ + + M E M GIGLAA QV R+ VIDV Sbjct: 1 MNIVTYPAPVLRQKAKPLTEINADVYKKAEKMVELMRRVHGIGLAAPQVGWSVRLFVIDV 60 Query: 64 SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 N + V INP ++E++GET EEGCLS P V R K+K+ A + +G+ E+ Sbjct: 61 VGNNVDDNVFINPSIMEEAGETSNEEGCLSFPGIMGKVIRTHKIKVCAYNLNGQKIEVVL 120 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + LLA QHE+DHL G LF+D +SP + Q++++L++ + Sbjct: 121 EDLLARAWQHELDHLNGCLFIDRMSPASRLAASQQLKELEQSYKK 165 >UniRef50_Q8XJL2 Peptide deformylase 1 n=12 Tax=Clostridiales RepID=DEF1_CLOPE Length = 147 Score = 216 bits (552), Expect = 2e-55, Method: Composition-based stats. Identities = 73/146 (50%), Positives = 98/146 (67%), Gaps = 1/146 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + DE LRK + V+++N I+ +V+DM ETMY G+GLA+ QV I +RI V Sbjct: 1 MAIRNLRFNDDEILRKKCRVVDDINDRIKVLVEDMIETMYENNGVGLASPQVGILKRIFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D + R V INPE+LEKSGE EEGCLS+P + V RA K+KI+ALD +G F Sbjct: 61 VDAMDGAGSR-VFINPEILEKSGEQTDEEGCLSLPGRHKPVKRANKIKIKALDVNGNEFV 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDY 146 L+A+G LA IQHE DHL G LF+D+ Sbjct: 120 LDAEGFLARAIQHEYDHLEGVLFIDH 145 >UniRef50_Q8NQ46 Peptide deformylase 1 n=8 Tax=Corynebacterium RepID=DEF1_CORGL Length = 169 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 62/158 (39%), Positives = 84/158 (53%), Gaps = 2/158 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V D L A V + + + ++DDMF+TM G+GLAA QV + +R+ V Sbjct: 1 MAVREVRLFGDPVLVSRADEVVDFDESLSTLIDDMFDTMEDAGGVGLAANQVGVLRRVFV 60 Query: 61 IDVSENRDE-RLVLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D S R +INP +EGCLSIP+ A R E V++ DRDG P Sbjct: 61 FDTSHQEGGLRGHVINPVWEPLTEDTQTGKEGCLSIPDVSAETTRYETVRLSGQDRDGNP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 A+GLLA CIQHE DHL G LF+ L P +++ Sbjct: 121 VGFVANGLLARCIQHETDHLDGVLFLKRLDPAERKAAM 158 >UniRef50_B3L389 Formylmethionine deformylase, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3L389_PLAKH Length = 242 Score = 215 bits (550), Expect = 3e-55, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 4/165 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LRK V + ++ +V MF MY +G+GLAA QV+I RIIV + Sbjct: 66 LKIVLYPDPVLRKKCNEVVNFDDNLRTLVRSMFNVMYESKGMGLAAPQVNISMRIIVWNA 125 Query: 64 ---SENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + ++ V INP ++E S + + EGCLS P+ V R V I D DG Sbjct: 126 LYEKKKKENERVFINPSIVEPSLIRSKLVEGCLSFPDIEGKVDRPRVVSISYYDLDGNKH 185 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 G+ A QHE DHL G LF+D S ++ ++R K+ ++ R Sbjct: 186 LKILKGIHARIFQHEYDHLDGILFIDRFSQSEKHKVRAKLNEMIR 230 >UniRef50_C9KJ27 Peptide deformylase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ27_9FIRM Length = 155 Score = 215 bits (550), Expect = 3e-55, Method: Composition-based stats. Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ L++V PVE+++ ++++++DDM TMY +G+GLAA QV R++V Sbjct: 1 MAILEIKKAGAPVLKEVCAPVEKIDKDLRKLLDDMAVTMYESDGVGLAAPQVGRPIRVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID ++ + LINP + + G EGCLS+P V RA KVK+ L+R GK Sbjct: 61 IDCQDDHG-LIELINPVITFREGTATDTEGCLSVPGIYGEVERAAKVKVEFLNRRGKKQH 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 L A GLLA CIQHE+DHL G+LF+D L + Sbjct: 120 LTATGLLARCIQHELDHLEGQLFIDIAKSLHR 151 >UniRef50_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae TMO RepID=DEF_THELT Length = 171 Score = 215 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 5/167 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V ++ + D LRK +K VE V+ ++ D+FETMYA +GIGLAA Q+ + RI V+D Sbjct: 2 VKKIRLLGDPVLRKKSKNVERVDETTISLIKDLFETMYATDGIGLAAPQIGVSLRIFVMD 61 Query: 63 VSENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + V INPE++ KS E I EEGCLS+PE V R+++V +R ++ G+ E Sbjct: 62 ----DGKPRVFINPEIIYKSEEKEIAEEGCLSVPEVFEDVERSKEVTVRYMNEHGEEVEE 117 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A +QHE DHL G LF+D + ++ IR+K+ ++ R + Sbjct: 118 SFVDYSARVVQHEYDHLQGVLFIDLIPSSRRFAIRKKLIEIVRQSQK 164 >UniRef50_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=4 Tax=core eudicotyledons RepID=DEF1B_ARATH Length = 273 Score = 215 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LR K ++ + ++ +VD MF+ MY +GIGL+A QV ++ +++V + Sbjct: 81 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 140 Query: 64 SENRDE--RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + E +VL+NP++ + S + +EGCLS P A V R + VKI A D G+ F Sbjct: 141 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 200 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + L A QHE DHL G LF D ++ IR+++E L++ Sbjct: 201 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEK 244 >UniRef50_Q8REF0 Peptide deformylase n=15 Tax=Fusobacterium RepID=DEF_FUSNN Length = 174 Score = 215 bits (549), Expect = 4e-55, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 5/169 (2%) Query: 3 VLQVLHIPDERLRKVAKPVE--EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 V ++ ++ L+++AK VE E+N E ++ +DDM ETMY +G+GLAA Q+ + +RI V Sbjct: 2 VYKIKKYGEDVLKQIAKEVELSEINDEFRQFLDDMVETMYETDGVGLAAPQIGVSKRIFV 61 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 D + +INP ++ + ET EEGCLS+P V R ++V ++ L+ GK Sbjct: 62 CD--DGNGVLRKVINPIIVPLTEETQEFEEGCLSVPGIYKKVERPKRVLLKYLNEYGKEV 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 E A+ LA+ +QHE DHL G LF++ +SP+ ++ I +K+ + + R Sbjct: 120 EEIAENFLAVVVQHENDHLDGILFIEKISPMAKRLIAKKLANIKKETKR 168 >UniRef50_A6L9R8 Peptide deformylase n=8 Tax=Bacteroidales RepID=DEF_PARD8 Length = 185 Score = 215 bits (549), Expect = 5e-55, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 100/175 (57%), Gaps = 8/175 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V LRK A+ V + +++++V +MFETMY +G+GLAA QV + R++VID Sbjct: 2 ILPVFLYGQPVLRKEAEDVPKDYPDLKQLVANMFETMYNADGVGLAAPQVGLSIRLVVID 61 Query: 63 -------VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDR 114 E + + LINPE LE+S E +EEGCLS+P V R++ V++R D Sbjct: 62 GDVMGDDFPECKGFKRALINPEFLERSEEEIAMEEGCLSLPGIHEKVSRSKTVRVRYWDE 121 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + + E +G A +QHE +HL G +F+D +S +++Q + K+ + + R Sbjct: 122 NWEEHEEVVEGFAARIVQHECEHLTGHVFIDNVSAIRRQLNKGKLNSIIKGTVRC 176 >UniRef50_C4Z519 Peptide deformylase n=9 Tax=Clostridiales RepID=C4Z519_EUBE2 Length = 171 Score = 215 bits (548), Expect = 6e-55, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + + D+ LR AK + E+ I+ ++DDMF+TMY G+GLAA QV I +R++V Sbjct: 15 MAIRNIRTLGDDILRAKAKEITEMTPRIEELIDDMFDTMYEANGVGLAAPQVGIRKRLVV 74 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID ++ +VLINP +LE SG EGCLS+P + V R K++AL+ + + Sbjct: 75 IDCGDD---PIVLINPVVLETSGSQTGLEGCLSVPGKTGEVTRPNYAKVKALNENMEEII 131 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +E + LLA C+ HE+DHL G +++D + Sbjct: 132 VEGEELLARCLLHEIDHLDGIMYVDKV 158 >UniRef50_C0QZQ2 Peptide deformylase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=DEF_BRAHW Length = 187 Score = 215 bits (548), Expect = 6e-55, Method: Composition-based stats. Identities = 69/173 (39%), Positives = 115/173 (66%), Gaps = 6/173 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +++ DERL+KV++ +E+++ EI ++DDMFETMY E G+GLAA Q+ + +R++VI Sbjct: 2 LRELVIYGDERLQKVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGVLKRLVVIS 61 Query: 63 VSENRDE-----RLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 V + DE +L LINPE++ + ET +EEGCLS PE R V R ++K++ LDR+G Sbjct: 62 VPDFDDEEKPDFKLALINPEIIWHNDETESLEEGCLSFPEIRDDVARYTQIKVKYLDREG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 L+A+ +A +QHE+DH G F+D L +++R+++++++L R Sbjct: 122 NEQILDAENYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKELRNNTVRG 174 >UniRef50_B0RBE6 Peptide deformylase n=5 Tax=Actinobacteria (class) RepID=B0RBE6_CLAMS Length = 188 Score = 215 bits (548), Expect = 7e-55, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 8/169 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + D L A+ V+ + +++ +V DM+ETM G+GLAA QV + R+ V Sbjct: 1 MAVLPIRITGDPVLHAPARDVQAFDDDLRSLVADMYETMDEAPGVGLAAPQVGVPLRVFV 60 Query: 61 IDVSENRDERL--VLINPEL------LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 + E L V +NP+L + ++ E EEGCLS P +R + RA++ +RA+ Sbjct: 61 YSYETDDGEPLRGVAVNPDLFITPVAVREADEDTEEEGCLSFPGERFPLVRADRAILRAV 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D DG+P+E+EA G A +QHE DHL G L+ D L+ ++ + + + K Sbjct: 121 DLDGRPYEIEAAGWFARILQHEYDHLDGLLYTDRLAHEHRKPVAKVIRK 169 >UniRef50_C8WW76 Peptide deformylase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW76_ALIAD Length = 167 Score = 214 bits (547), Expect = 7e-55, Method: Composition-based stats. Identities = 71/159 (44%), Positives = 99/159 (62%), Gaps = 5/159 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LR+ A+ V + I R++DDM ETMY +GIGLAA Q+ I +R++V Sbjct: 1 MAIRIIRKGEDPVLRQKAQVVTQFTPAIHRLLDDMAETMYDADGIGLAANQIGILKRLVV 60 Query: 61 IDVSENRDER-----LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 IDV D + L+NPE+LE+SG E CLS+P +V RA V++RA +R Sbjct: 61 IDVQPKEDSFQKRAWIELVNPEILERSGVQREREACLSLPGLSGVVERAAYVRVRAQNRY 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 G+ FE+E LLA C+QHE+DHL G LF DYL P + +R Sbjct: 121 GEFFEIEGRDLLARCLQHEIDHLDGILFTDYLRPEEIER 159 >UniRef50_C6BVK1 Peptide deformylase n=2 Tax=Desulfovibrio RepID=C6BVK1_DESAD Length = 170 Score = 214 bits (547), Expect = 8e-55, Method: Composition-based stats. Identities = 70/168 (41%), Positives = 105/168 (62%), Gaps = 3/168 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L +L P+E L++V VEEV E++ I+D+M ETMY ++G+GLAA QV + +R+IVID Sbjct: 3 LDILAYPEESLKEVCSRVEEVTPELKEIIDNMIETMYEDDGVGLAAPQVGVQKRLIVIDP 62 Query: 64 --SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + V+INPE++EKS + EE CLS P + ++ R E V + D +G Sbjct: 63 SGPKERTDLQVIINPEIVEKSSQKVDSEEACLSCPGFKCVIKRHETVTVTGTDPEGNDVR 122 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +EAD LAI +QHE+DHL G L +D + LK+ +KV+K + + Sbjct: 123 IEADDFLAIVLQHEIDHLDGTLIVDRVGRLKRAMYDKKVKKWLKSAGK 170 >UniRef50_D0XQM3 Peptide deformylase n=2 Tax=Alphaproteobacteria RepID=D0XQM3_9CAUL Length = 220 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 25/194 (12%) Query: 1 MSVLQVLHIPD----ERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M++ ++L I + L++V+KPV V+ ++ ++DDM +TMY GIGLAA Q+ Q Sbjct: 27 MAIRRILTIDNTADLAILKQVSKPVAVVDDAVRALMDDMLDTMYDAPGIGLAAVQIGELQ 86 Query: 57 RIIVIDVSENR--------------------DERLVLINPELLEKSGET-GIEEGCLSIP 95 R++V+D+ + +NPE++ S ET EEGCLSIP Sbjct: 87 RVVVMDLGDGPAPEAAEAAAEDEEGSEETRVPNPRFFVNPEVIWASDETFCYEEGCLSIP 146 Query: 96 EQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 E V R +V++ LDR G E E +GL A+C QHE+DHL G LF+D+LS L++ R Sbjct: 147 EYFDQVERPARVRVAYLDRTGARIEGEIEGLYAVCFQHELDHLNGVLFIDHLSRLRRDRA 206 Query: 156 RQKVEKLDRLKARA 169 KV+K RL+ A Sbjct: 207 MSKVKKTMRLREDA 220 >UniRef50_B2GGT8 Peptide deformylase n=8 Tax=Actinomycetales RepID=B2GGT8_KOCRD Length = 249 Score = 213 bits (545), Expect = 1e-54, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L++ I D LR A+ V + + ++ +V DM ETMYA G+GLAA QV + +I Sbjct: 1 MSILRIRTIGDPVLRTPAQEVPQFDESLRTLVRDMVETMYAVGGVGLAAPQVGVGLQIFT 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + ++NP L EGCLS+P PR + + +D G+P Sbjct: 61 WGIEGDEGH---VVNPRLSVGHEPQDGGEGCLSVPGLSYETPRMDSATLTGVDMHGRPVH 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 +A GLLA C QHE DHL G L++D L ++ +++ Sbjct: 118 RDATGLLARCFQHETDHLRGTLYVDRLEGEHRRDAMRQLR 157 >UniRef50_C4G2R8 Peptide deformylase n=6 Tax=Firmicutes RepID=C4G2R8_ABIDE Length = 175 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 100/147 (68%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + + DE L K A+ ++E + +IQ ++DDM ETMY +G+GLAA QV + +R+ V Sbjct: 1 MALRNIRIVGDEILNKRAREIKENSDKIQTLIDDMLETMYDADGVGLAAPQVGVLKRLFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID SE+R+E V INPE+LE SGE EGCLS+P + +V R E VK++AL+R+ + + Sbjct: 61 IDCSEDRNEPFVFINPEILETSGEQTGSEGCLSVPGKAGIVTRPEYVKMKALNREFEEYI 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +E +GL A + HE +HL G ++ + + Sbjct: 121 IEGEGLFARAMVHENEHLDGHIYTEKV 147 >UniRef50_C7NGP0 Peptide deformylase n=2 Tax=Micrococcineae RepID=C7NGP0_KYTSD Length = 192 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 10/171 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + I + L + K V EV EI+ +V DMF+TM A EG+GLAA QV + RI V Sbjct: 1 MAVRPITIIGHKALHQPTKKVREVTDEIRTLVADMFDTMEAAEGVGLAANQVGVRWRIFV 60 Query: 61 IDVSENR----DERLVLINPELLEKS------GETGIEEGCLSIPEQRALVPRAEKVKIR 110 D + + D R V++NP L ++ EGCLS+P + R++ ++ Sbjct: 61 YDCTHDPEAGPDARGVVVNPVLEKEHVSPLSADPEADHEGCLSVPGESFPTARSDWARVT 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D DG +E GLL C+QHE DHL G L+++ LSP ++R R +++ Sbjct: 121 GTDLDGNAISVEGTGLLGRCLQHETDHLDGHLYVERLSPEDKRRARDAIKE 171 >UniRef50_A6Q676 Peptide deformylase n=5 Tax=Epsilonproteobacteria RepID=A6Q676_SULNB Length = 174 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 63/173 (36%), Positives = 107/173 (61%), Gaps = 9/173 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ PD+RL+++++ V + + ++DDM+ETM A G+GLAA QV + R ++I+ Sbjct: 2 VREIVIYPDKRLKQISREVGSFDGALHDLLDDMYETMIARNGVGLAAIQVGVDLRALIIN 61 Query: 63 VSENRDE---------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V ++E L +INP ++E G+ +EGCLS+P V RA+ VK+ D Sbjct: 62 VPLEKEEGEHDQPKENTLEMINPVIVEMDGKEKFQEGCLSVPGVYEDVERAKHVKVEYYD 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 R+G+ +E D LAI +QHE+DHL GK+F++ LS LK+++ ++ K + + Sbjct: 122 RNGEKHIIEDDDFLAIAMQHEIDHLDGKVFIEKLSFLKRKKFEKEWAKRQKAQ 174 >UniRef50_Q3B2U9 Peptide deformylase n=11 Tax=Chlorobiaceae RepID=DEF_PELLD Length = 190 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 62/165 (37%), Positives = 100/165 (60%), Gaps = 4/165 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + DE L + AKP++ V+A+I ++D MFE+M GIGLAA QV R++V+D Sbjct: 2 ILPINTYSDEVLHQKAKPLKGVDADISSLIDSMFESMENASGIGLAAPQVGCSIRLLVLD 61 Query: 63 VS----ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 VS +V+INP +L G+ +EEGCLS+P + V R ++ ++ DR+ + Sbjct: 62 VSCMKSYEDVPPMVVINPNVLAVRGKNLMEEGCLSVPGVQGDVLRPSEITLKYRDRNFQE 121 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E G+LA +QHE+DHL G LF+D + ++RI+Q+++ + Sbjct: 122 HTEEFSGMLARVLQHEIDHLNGTLFVDRMEKRDRRRIQQELDDIA 166 >UniRef50_A5CF65 Peptide deformylase n=18 Tax=cellular organisms RepID=DEF_ORITB Length = 181 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 12/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ PD L+KV+ PV+ VN I++++DDM ETMY G+GLAA QV + +RIIV Sbjct: 1 MSILSLVTAPDPILKKVSSPVDTVNDSIRQLIDDMLETMYHNHGVGLAAPQVAVSKRIIV 60 Query: 61 IDVSE-----------NRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 +D+S+ L ++NP + S +T +EGCLS+P+Q V R +++ Sbjct: 61 LDLSKVDIEEDNITNSEYKYPLFMVNPIVKAISNQTVTAKEGCLSLPKQAIEVSRYHEIQ 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 + LD K L A G LA IQHE+DHL G L +DYLS LK++ + K+ Sbjct: 121 VTYLDYYNKLKTLNAAGWLARAIQHEVDHLDGILLVDYLSNLKKEATLNTLSKIK 175 >UniRef50_D1C7I8 Peptide deformylase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7I8_SPHTD Length = 177 Score = 212 bits (542), Expect = 3e-54, Method: Composition-based stats. Identities = 68/153 (44%), Positives = 97/153 (63%), Gaps = 6/153 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL++++ D RLR+ A + +V+ +++R+ DM ETMYA +G+GLA QV + +RIIV Sbjct: 1 MAVLKLVYEGDPRLRQKAVRIRKVDDDLRRLAADMLETMYAADGVGLAGPQVGVMRRIIV 60 Query: 61 IDVS---ENRDER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 I V EN D+ + LINPE++ SG EGCLSIP VPRA V ++A D Sbjct: 61 IGVPAGFENEDDPPIEMALINPEIVRASGRQVGPEGCLSIPNWYGEVPRAMHVTVKARDL 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 D + ++A G LA +QHE+DHL G LF D + Sbjct: 121 DDREIRIKASGGLARILQHEIDHLDGILFTDRV 153 >UniRef50_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMG4_9BACT Length = 164 Score = 212 bits (542), Expect = 3e-54, Method: Composition-based stats. Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS + PD LR+ K +E + + +++M MY +G+GLAA QV ++ V Sbjct: 1 MSDRTIRIYPDPVLREPTKEIERFDDNFKSFLEEMESLMYEYDGVGLAAPQVGESLKVAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 I + VLINP +++ G +EGCLS P V R V + A D +G+P+ Sbjct: 61 IAY---EGKLHVLINPRIVDYDGRQVDQEGCLSFPGIFEDVARPASVVVEAQDENGEPYS 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 +EA+G LA + HE+DHL GKL +D+LSP+K++ + Sbjct: 118 IEAEGFLARAMCHEIDHLNGKLMIDHLSPMKREMV 152 >UniRef50_A8LE21 Peptide deformylase n=17 Tax=Actinomycetales RepID=DEF_FRASN Length = 183 Score = 212 bits (542), Expect = 3e-54, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 3/164 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV + + D LR VA PV + E++R+VDD+ +TM G+GLAA Q+ + RI Sbjct: 1 MSVRDIRLLGDPVLRTVADPVATFDRELRRLVDDLADTMRDAGGVGLAAPQLGVSLRIFT 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ DE LINP L S E EEGCLS+P + R E+V + G P Sbjct: 61 Y--LDDSDEVGHLINPVLGPFSEEMMDGEEGCLSLPGLAFDLRRPERVLAVGQNSHGDPV 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 +E G+L+ C+QHE DHL G LF+D L ++ + + + + Sbjct: 119 TVEGSGILSRCLQHETDHLDGILFIDRLDKETKRAAMKAIREAE 162 >UniRef50_C0Z4W7 Peptide deformylase n=4 Tax=Firmicutes RepID=C0Z4W7_BREBN Length = 171 Score = 212 bits (541), Expect = 4e-54, Method: Composition-based stats. Identities = 81/174 (46%), Positives = 115/174 (66%), Gaps = 8/174 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+V Q+L D LRKVAKPVEE+N + +++D+M ET+YA +G GLAA Q+ I +R++ Sbjct: 1 MAVKQILPFGDPILRKVAKPVEELNEKTFKLLDEMAETLYAADGRAGLAAPQIGILRRVV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 V+D + E LINPE++E+SGE E CLS P V RAE VK++ L+R G+ Sbjct: 61 VMDCGDGLIE---LINPEIIERSGEQIGMEACLSFPGYYGNVKRAEHVKVKTLNRQGEEM 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL--SPLKQQRIRQKVEKLD--RLKARA 169 L DG LA+C+QHE+DHL G LF+D++ L ++ RQKV+ L+ RL +A Sbjct: 118 ILAGDGFLAVCMQHEIDHLDGILFVDHVQEKWLYHEKTRQKVDVLEVIRLTKKA 171 >UniRef50_C1A607 Peptide deformylase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A607_GEMAT Length = 196 Score = 211 bits (540), Expect = 5e-54, Method: Composition-based stats. Identities = 73/160 (45%), Positives = 103/160 (64%), Gaps = 3/160 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L + + LR+ + VE V E++R+VD+MF+TM A +G+GLAA QV +R+ V Sbjct: 1 MSLLDIHVLGSPVLRQETQRVESVTPELRRLVDNMFDTMEAAKGVGLAAPQVGRLERLAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D D RLV+INPE++ + G EEGCLSIPE A V R +V +RA D D +E Sbjct: 61 VDAD---DVRLVVINPEIILREGLERGEEGCLSIPEVYADVDRPARVIVRAQDIDLNWYE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 ++A LL C+QHE+DHL GKLF D LS LK++ + + Sbjct: 118 VDAANLLGRCLQHEIDHLFGKLFTDRLSLLKKRSAMKDWD 157 >UniRef50_B3QS23 Peptide deformylase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS23_CHLT3 Length = 202 Score = 211 bits (539), Expect = 7e-54, Method: Composition-based stats. Identities = 66/167 (39%), Positives = 107/167 (64%), Gaps = 4/167 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L V + + L KVAKP++ V+AE+++ ++DMFETMY +GIGLAA QV R++V Sbjct: 19 MSILPVYTLGEPVLNKVAKPLKGVDAEMKQFIEDMFETMYNADGIGLAAPQVGKSLRLLV 78 Query: 61 IDVS----ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +DVS ++ LV+INP++LE G + +EEGCLS+P V R +++ ++ D D Sbjct: 79 VDVSVMEDYQDEKPLVVINPQILETKGLSTMEEGCLSVPGVHEEVTRPKQITLKYRDADF 138 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 DG++A +QHE++HL G LF+D L ++ R++++ + Sbjct: 139 VERVEIYDGMMARVLQHEIEHLQGNLFIDNLDAKTRRLHREELDAIK 185 >UniRef50_Q8I372 Formylmethionine deformylase, putative n=2 Tax=Plasmodium RepID=Q8I372_PLAF7 Length = 241 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 4/164 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV- 63 +++ PD LR+ ++ V + ++R+V MF+ MY +GIGL+A QV+I +RIIV + Sbjct: 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNAL 125 Query: 64 --SENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + INP ++E+S + + EGCLS P V R V I D +G Sbjct: 126 YEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHL 185 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 G+ + QHE DHL G LF+D ++ + ++++R K+ +L R Sbjct: 186 KILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIR 229 >UniRef50_C9LLK7 Peptide deformylase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK7_9FIRM Length = 161 Score = 211 bits (538), Expect = 8e-54, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 3/149 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 +++ D L+ VA PV + +++ +V++M +TMY G+GLAA Q+ + +R+ V D Sbjct: 10 KIITAGDPILKSVAMPVTAFDKKLKFLVNEMKKTMYESNGVGLAAPQIAVSKRVFVADDG 69 Query: 65 ENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 E+ E INP E + EGCLS+P V R V ++ D GK + +A Sbjct: 70 ESGFE--AYINPRWTPDGDEKVTDTEGCLSVPNWYGEVERYANVTVKYQDIHGKRKQKKA 127 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 GLLA CIQHE DHL G LF++ + L + Sbjct: 128 TGLLARCIQHETDHLNGILFIEKANSLHK 156 >UniRef50_A6C970 Peptide deformylase n=2 Tax=Planctomycetaceae RepID=A6C970_9PLAN Length = 196 Score = 211 bits (538), Expect = 9e-54, Method: Composition-based stats. Identities = 62/158 (39%), Positives = 94/158 (59%), Gaps = 3/158 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M LQ+++ P LR +KPV+ + E++ IV +MF+ MY GIGLAA QV + R+ V Sbjct: 1 MPALQIVNYPHPALRWKSKPVKSITPELRDIVRNMFDLMYEARGIGLAANQVALPYRLFV 60 Query: 61 IDV---SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 I++ +E V INPE+ ++ G EEGCLS+P+ V R+E++ + A D +G+ Sbjct: 61 INLTSDPNEPEEEFVFINPEITKRKGTAEGEEGCLSLPQVYGDVKRSEEITVEAYDLNGQ 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 FE+ D L A +QHE DH+ G +F D + K+ I Sbjct: 121 LFEITLDDLAARAVQHEHDHIEGIMFPDRMVEAKRNEI 158 >UniRef50_C4ZEV9 Peptide deformylase n=9 Tax=Clostridia RepID=DEF_EUBR3 Length = 158 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D L KV + V EV +I ++DDM ETMY G+GLAA QV I +RI+V Sbjct: 1 MALRTIRVEGDPVLGKVCREVTEVTPKIVTLIDDMLETMYEANGVGLAAPQVGILKRIVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E +V+INPE++E GE +EGCLS+P + V R VK R + D +E Sbjct: 61 IDVGEG---PIVMINPEIIESDGEQTGDEGCLSVPGKAGQVTRPNYVKARFMGEDMNEYE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +E + LLA CI HE+DHL G L+++ + Sbjct: 118 IEGEELLARCICHELDHLDGHLYVEKV 144 >UniRef50_Q17XD4 Peptide deformylase n=60 Tax=Epsilonproteobacteria RepID=DEF_HELAH Length = 175 Score = 210 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 70/170 (41%), Positives = 112/170 (65%), Gaps = 5/170 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L+++H P + LR ++K V +A+ + +DDM ETM A EGIGLAA QV + R+++ Sbjct: 1 MALLEIIHYPSKILRTISKEVVSFDAKFHQQLDDMHETMIASEGIGLAAIQVGLPLRMLL 60 Query: 61 IDVS-----ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 I++ +++++ L +INP+ +E G +EGCLS+P V R EKVKI +R Sbjct: 61 INLPREDGVQHKEDCLEIINPKFIETKGSIMFKEGCLSVPGFYEEVERFEKVKIEYQNRF 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 K LEA LLA+ IQHE+DHL G LF+D LS LK+++ +++++L++ Sbjct: 121 AKVKVLEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELNKN 170 >UniRef50_A6DUA1 Peptide deformylase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUA1_9BACT Length = 197 Score = 210 bits (536), Expect = 1e-53, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 14/175 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V + LRKVA+P+ E+N EI+ +V++M +TMY E GIGLAA QV R+ VID Sbjct: 7 ILDVKKFGNPVLRKVAEPISEINDEIRELVEEMVDTMYEENGIGLAAPQVGRSLRVFVID 66 Query: 63 VSENRDE-------------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVK 108 + L LINPE++ SGE EEGCLSIP+ A V R + Sbjct: 67 THFEDETYGSDGEKLLCPKMPLALINPEIISTSGEDISFEEGCLSIPQINAAVVRPSNIV 126 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 ++A +G+ E + GL + C+QHE+DHL G LF D + + +K+E+L Sbjct: 127 LKAQTLEGEIIEADFGGLTSRCMQHEIDHLDGVLFTDKAEKDDLKLVAKKLEQLR 181 >UniRef50_Q6NH22 Peptide deformylase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NH22_CORDI Length = 169 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 2/168 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D L + VE ++ I+ +V+DM ETM A G+GLAA QV + +R+ V Sbjct: 1 MAIRDIRLFGDPVLTTKSSDVEVFDSSIRNLVNDMLETMDAAGGVGLAANQVGVTKRVFV 60 Query: 61 IDVSENRDE-RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D S D R +INP + I EGCLSIP+ + R V + D DG P Sbjct: 61 YDCSHIEDGLRGHIINPVWEPIGEDIQIGPEGCLSIPDVQEETERWMTVSVSGRDVDGNP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 L A GL+A CIQHE DHL G LF+ L + ++ ++ K + Sbjct: 121 ISLVASGLMARCIQHETDHLDGVLFLRKLDKVHRKDAMAQIRKSEWFN 168 >UniRef50_B5EMH5 Peptide deformylase n=4 Tax=Proteobacteria RepID=B5EMH5_ACIF5 Length = 167 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 5/163 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+VL +L PD RL++ A PV + ++ +DD+ ETMYA G +G+AA QVD QRI+ Sbjct: 1 MAVLPILTYPDSRLQRKADPVSVFDDDLHHFIDDLTETMYAGPGGVGIAAPQVDRAQRIV 60 Query: 60 VIDV----SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ++DV ++ +VLINPEL G EGC+S+P+ V RAE+++++A D Sbjct: 61 IVDVRPKLGDDCHGLMVLINPELAAWEGMVVGREGCMSVPDFTGNVIRAERIQVQAQDVL 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 G+ E +G A +QHEMDHL G LF+D L K R+K Sbjct: 121 GRERSYECEGFEARAVQHEMDHLDGLLFLDRLVSRKVDLFRRK 163 >UniRef50_A4A7C9 Peptide deformylase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7C9_9GAMM Length = 169 Score = 209 bits (533), Expect = 3e-53, Method: Composition-based stats. Identities = 68/156 (43%), Positives = 100/156 (64%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L ++ +PDERLR+ ++ V + +Q+ V+D+FET+ IGL+A Q I +RIIV Sbjct: 1 MAILDIIEVPDERLREHSEAVSRFDEALQQQVNDLFETLGHSGAIGLSAPQTGIFKRIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + V ++ V INPE+L++S +EE CLS+P V R +VK+RA D GK E Sbjct: 61 VHVPDDDFGARVYINPEILKRSKSRYVEESCLSVPGIEGNVVRCIRVKLRAQDIHGKLCE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 + D L A+C+QHE+DHL G LF D LS K+ R+R Sbjct: 121 FDVDDLHAVCVQHEVDHLDGILFTDRLSWFKKLRLR 156 >UniRef50_Q5VNN5 Peptide deformylase 1B, chloroplastic n=3 Tax=Oryza sativa Japonica Group RepID=DEF1B_ORYSJ Length = 269 Score = 209 bits (533), Expect = 3e-53, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+V+ PD LR K + + ++ + D+MF+ MY +GIGL+A QV ++ +++V + Sbjct: 78 LKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP 137 Query: 64 S--ENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + E +VL+NP + + S EEGCLS P A V R + VKI A D G + Sbjct: 138 AGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQDVTGAKIK 197 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 ++ GL A QHE DHL G LF D +S + +R+ ++ L++ Sbjct: 198 VKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241 >UniRef50_D2PNQ8 Peptide deformylase n=2 Tax=Propionibacterineae RepID=D2PNQ8_9ACTO Length = 201 Score = 209 bits (533), Expect = 3e-53, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 6/168 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 SVL + ++ + +V +PV + ++ ++V DM TM A EG+GLAA QV + ++ V Sbjct: 9 SVLPITRWGEDVMHRVNQPVTDFGDDLHKLVADMVATMNAAEGVGLAANQVGVDLQLFVF 68 Query: 62 DVSENRDERL--VLINPELLEKSGETGI----EEGCLSIPEQRALVPRAEKVKIRALDRD 115 D + R V+ NP+L G+ EEGCLS+P R + K+ +D Sbjct: 69 DCPDRDGVRHQGVVCNPKLELPEGKDRHLDEGEEGCLSLPGAFTKCARPDYAKVTGVDEH 128 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 G P E +GLLA C+QHE DH G +F D LS ++R+ + E+L Sbjct: 129 GNPVSYEGNGLLARCLQHETDHTQGMVFGDRLSRKYKKRLFAEAEELA 176 >UniRef50_B9MR36 Peptide deformylase n=97 Tax=Firmicutes RepID=DEF_ANATD Length = 166 Score = 209 bits (533), Expect = 3e-53, Method: Composition-based stats. Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ DE LRK +K VE+ + + +++DDM +TMY GIGLAA QV + +R +V Sbjct: 1 MALRKIRTYEDEILRKKSKVVEKFDQRLCQLLDDMKDTMYEANGIGLAAPQVGVLKRAVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+ E E L+NPE+ + G EGCLS+P V R +KV ++A DR G F Sbjct: 61 IDIGEGAIE---LVNPEIEQVEGSAVDVEGCLSVPNVWGEVERPQKVVVKAQDRFGNEFR 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LEA+GLLA + HE+DHL G LF+D + + E++++ ++R Sbjct: 118 LEAEGLLARAVCHEIDHLDGILFVDKVIRFVSE------EEIEQRRSRG 160 >UniRef50_A8ZUK5 Peptide deformylase n=2 Tax=Desulfobacteraceae RepID=DEF_DESOH Length = 173 Score = 208 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 73/169 (43%), Positives = 116/169 (68%), Gaps = 3/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL ++ P + L+ A PV ++ ++Q+++DDM +TMYA +G+GLAA QVD R+++ Sbjct: 1 MTVLDIVTYPADVLKDGALPVANIDGKLQQLIDDMAQTMYAHQGVGLAAVQVDSGLRLVI 60 Query: 61 IDVSENRDER--LVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGK 117 DVS+ R+++ V+INPE++ GE E EGCLS+PE R V RA V++ +DR+G+ Sbjct: 61 YDVSDQREKQQFRVVINPEVVAVDGECVSEQEGCLSVPELRTDVKRAATVRVEGVDREGR 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 P ++A+GL AI +QHE+DHL G L +D S LK++ ++KV+K + Sbjct: 121 PLVIDAEGLEAIVLQHEIDHLNGTLILDRASRLKRELYKRKVQKRIKQA 169 >UniRef50_Q8NM41 Peptide deformylase 2 n=13 Tax=Actinomycetales RepID=DEF2_CORGL Length = 193 Score = 208 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ D L + V E +E+Q ++ DM+ETM G+GLAA Q+ + +RI V Sbjct: 1 MTVRPIVIHGDPVLHNPTQLVTEDVSELQELIADMYETMDVANGVGLAANQIGVSKRIFV 60 Query: 61 IDVSENRD--ERLVLINPELLEKSGETGI-------EEGCLSIPEQRALVPRAEKVKIRA 111 D ++ + INP L + EEGCLS+P + RA K+ Sbjct: 61 YDCPDDEGVMHKGCFINPVLETSEIPETMPADDGSDEEGCLSVPGEGFPTGRAHWAKVTG 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 L+ G+ +EA+G LA C QHE+ HL G L+ D L ++ ++ ++ Sbjct: 121 LNEKGEEVSVEAEGFLARCFQHEVGHLDGFLYTDVLIGRWKRMAKKAIK 169 >UniRef50_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWW4_HALHL Length = 162 Score = 208 bits (531), Expect = 5e-53, Method: Composition-based stats. Identities = 70/155 (45%), Positives = 96/155 (61%), Gaps = 1/155 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++L PD RLR+ + PVE + + +VDDM ETM+A IGLAA QVD+ QRI V Sbjct: 1 MATLEILEHPDPRLRQPSAPVERFDQALCELVDDMIETMHARSAIGLAAPQVDVRQRI-V 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + +E V INPE+ S IEE CLS+P Q+ LV R +V +RA D G+ F Sbjct: 60 VCCTEPAQAPRVFINPEITGSSLPGYIEESCLSVPGQQGLVRRPTRVSVRAQDTAGERFH 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 + + L A+C+ HE+DHL G LF+D L K+ +I Sbjct: 120 CKLENLDAVCLHHEIDHLDGTLFIDRLPFWKRLKI 154 >UniRef50_D1VSE6 Peptide deformylase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE6_9FIRM Length = 166 Score = 208 bits (531), Expect = 5e-53, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LRK +K VE N ++ +VDDMFETM + +G+GLAA QV + +R+IV Sbjct: 1 MAIRNIRTDEDTILRKKSKTVENFNDRLKVLVDDMFETMDSADGVGLAAPQVGMLKRLIV 60 Query: 61 IDVSENRD-ERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D + + R LINP + K G EGCLSIP ++ V RA + + DGK Sbjct: 61 VDDRDEENQHRFYLINPVITRKEGSEVCREGCLSIPGKQGDVKRATDIDVTYNTLDGKEE 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 ++ LA IQHE+DHL G L+ D K RI QK + L+ L Sbjct: 121 KINCKDFLARIIQHEIDHLDGILYTDR--AEKMYRIVQKDDNLEEL 164 >UniRef50_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TMS8_PHYPA Length = 202 Score = 208 bits (531), Expect = 5e-53, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 13/177 (7%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 S L+V+ PD RLR K ++ + ++Q++V++M + MY +G+GLAA QV ++ R++V Sbjct: 9 SPLEVILYPDPRLRAKNKFIKVFDDKLQQLVNEMLDVMYKTDGVGLAAPQVGVNVRLMVY 68 Query: 62 DVSENRD--ERLVLINPELLEKSG-ETGIEEGCLSIP----------EQRALVPRAEKVK 108 + S R + VL+NP +++ +EGCLS P A V R + V+ Sbjct: 69 NPSGERGSGKEYVLVNPRIVKYGKSRDLFDEGCLSFPVLERGPNQSLTIEAEVERPKSVR 128 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 I A D GK F + A QHE DHL G L+ D ++P IR ++EKL++L Sbjct: 129 IDAQDIKGKKFSINLKDFQARIFQHEYDHLEGILYFDRMTPEVLDTIRPELEKLEKL 185 >UniRef50_B9L0C1 Peptide deformylase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=DEF_THERP Length = 176 Score = 208 bits (531), Expect = 5e-53, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 6/161 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ D RLR+ A + V+ E++++ D+++T+ A G+GLAA Q+ + +RIIV Sbjct: 1 MAVRTIITEGDPRLRQKAIRIRVVDEEVRQLARDLWDTVRAARGLGLAAPQIGVLRRIIV 60 Query: 61 IDVSEN------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 + + + L LINPE++ SG EGCLSIP VPR+ V ++ALD Sbjct: 61 VAIPPDYVEEGDPGVELTLINPEIVRASGRQVGLEGCLSIPGWYGEVPRSMHVTVKALDL 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 DG+ ++ GLLA +QHE+DHL G LF+D + R Sbjct: 121 DGREVRVKGSGLLARVLQHEIDHLEGILFVDRIEDRSTLRY 161 >UniRef50_C0WD89 Peptide deformylase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD89_9FIRM Length = 164 Score = 208 bits (531), Expect = 6e-53, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 4/155 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ + LR+ A+ V + ++++ + M E+MYA G GLAA Q+ + +R+IV Sbjct: 9 MSLLPIVKVGAPILREKAEAVTRFDKKLEKTLKAMAESMYANNGCGLAAPQIGLSKRMIV 68 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID + R +NP L E GE EGCLS+ + V RA +V +R DR G + Sbjct: 69 IDADDGAGIRE-FVNPVLSEFKGEEIDTEGCLSVDDYEGEVKRAAEVTVRFQDRKGGHWR 127 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDY---LSPLKQ 152 L A GLLA +QHE DHL G LF+D LSP ++ Sbjct: 128 LTASGLLARALQHECDHLDGILFIDRALSLSPKRK 162 >UniRef50_B0PFT9 Peptide deformylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT9_9FIRM Length = 155 Score = 208 bits (531), Expect = 6e-53, Method: Composition-based stats. Identities = 69/146 (47%), Positives = 100/146 (68%), Gaps = 4/146 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L DERLRK ++PV + N + ++DDM+ETM G+G+AA QV + +R +V Sbjct: 1 MALRNILKEGDERLRKKSRPVTDFNERLWTLLDDMYETMKD-GGVGIAAPQVGVLRRAVV 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E + E L+NP ++E+SG+ EGCLSIP Q LV R +++++A DR GKPFE Sbjct: 60 IDVGEGKHE---LVNPVIVEQSGDQCGGEGCLSIPGQYGLVHRPAQLRLKAQDRYGKPFE 116 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDY 146 LEA+G A+ + HE+DHL G LF+D Sbjct: 117 LEAEGYFAVAVCHEVDHLDGILFIDK 142 >UniRef50_A4RVA1 Peptide deformylase, organellar n=2 Tax=Eukaryota RepID=A4RVA1_OSTLU Length = 240 Score = 208 bits (530), Expect = 7e-53, Method: Composition-based stats. Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 3/160 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + P + LR PVE + ++R+ MF+ MY G GLAA QV ++ R++V + Sbjct: 66 LAIAKYPAKCLRAKNAPVETFDKNLERLSKAMFKIMYETVGCGLAAPQVGVNYRMMVYNE 125 Query: 64 S--ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + +VL NPE+++ S E EEGCLS P+ A V R V+I A + GK F+ Sbjct: 126 AGEPGQGREVVLCNPEIVKFSKEKDLFEEGCLSFPKMYADVERPIGVQIEAQNLKGKKFK 185 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 + +G A QHE DHL G L+ D +SP + ++ ++ Sbjct: 186 MTLEGFEARVFQHEYDHLDGVLYHDRMSPEVRASVQSTLD 225 >UniRef50_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola RepID=Q73M64_TREDE Length = 169 Score = 208 bits (530), Expect = 7e-53, Method: Composition-based stats. Identities = 73/166 (43%), Positives = 109/166 (65%), Gaps = 4/166 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++VL++ +E LR+V+KPVE+++ I+ ++D+MF T+ E GIGLAA QV + R+ ++ + Sbjct: 1 MKVLYLGEETLREVSKPVEKIDENIKSLIDEMFVTVKKENGIGLAAPQVGENIRLFIVFI 60 Query: 64 SENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 +E ++ V INPE++E S E +EEGCLSIP+ V R VK++ L+ DGK +E Sbjct: 61 NE---QKYVFINPEIIETSQEMCLMEEGCLSIPKVYDEVMRPSAVKVQFLNIDGKIKTIE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A GLLA IQHE DHL G LF+D LS K+ +K E L ++ Sbjct: 118 ASGLLARVIQHENDHLNGILFIDRLSEEKKAEAIEKFEHKKALFSK 163 >UniRef50_C8PRC6 Peptide deformylase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRC6_9SPIO Length = 173 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++VL++ +E LR+ +KPVE ++ + ++ +MF TM + GIGLAA Q+ + R+ ++ + Sbjct: 1 MKVLYLGEETLRQPSKPVEHIDEALHELIREMFITMDEDNGIGLAAPQIGKNVRLFIVKI 60 Query: 64 SENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + + V INP ++ S + EEGCLSIP+ A V R E V ++ D +G+ +E Sbjct: 61 DDGIER--VFINPLIVGTSEKQCSYEEGCLSIPKMFADVVRPEAVTVQYQDMNGRRRTIE 118 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A GLLA IQHE DHL G LF+D LS ++ + K + K + Sbjct: 119 ATGLLARVIQHEYDHLEGVLFIDRLSEKERDSLVAKFTQQQERKKQ 164 >UniRef50_A3DCX4 Peptide deformylase n=24 Tax=Clostridia RepID=DEF_CLOTH Length = 170 Score = 207 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + DE LRKV+K V+ ++ I+ ++DDM ETMYA G+GLAA QV + +R++V Sbjct: 1 MAVRFIREDGDEILRKVSKKVDVIDERIKTLLDDMAETMYAANGVGLAAPQVGVLKRVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV + E LINPE++E+ GE EGCLSIP V R +V + AL+R+G+ Sbjct: 61 IDVGDGLME---LINPEIVEQEGEQIDIEGCLSIPGVAGEVKRPARVVVEALNREGEKIT 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +E LLA+ + HE+DHL G LF D + Sbjct: 118 VEGKELLAVALCHEIDHLDGILFTDKV 144 >UniRef50_C1MGI0 Peptide deformylase n=2 Tax=Viridiplantae RepID=C1MGI0_9CHLO Length = 210 Score = 207 bits (528), Expect = 1e-52, Method: Composition-based stats. Identities = 58/162 (35%), Positives = 94/162 (58%), Gaps = 3/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ P +LR K + +AE++++ D MF MY +G+GLAA QV ++ R++V + Sbjct: 37 LEIQKYPSAKLRDENKKIGVFDAELKKLADAMFAKMYESDGVGLAAPQVGVNYRLMVYNE 96 Query: 64 SENRDE--RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + +V++NP++++ S E EEGCLS P A V R V I A + +GK F+ Sbjct: 97 AGERGKGAEVVMVNPKIVKFSKEKDMFEEGCLSFPAIYADVERPTAVTIEAQNVNGKKFK 156 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + DG A QHE DHL G LF D ++ ++R +++ L Sbjct: 157 MTLDGFQARVFQHEYDHLDGVLFHDRMAADVVAKVRAELDDL 198 >UniRef50_A5D1C0 Peptide deformylase n=3 Tax=Clostridia RepID=DEF_PELTS Length = 155 Score = 206 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 3/152 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +++ + D L++ AK V ++N I +++D+M ETMY G+GLAA Q+ + +R+IV Sbjct: 1 MAVYKIVELGDRILKERAKEVPKINQNIIKLLDNMAETMYHARGVGLAAPQIGVSKRVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +DV E L +INP + +G EGCLSIP V RA ++++ LDR GKP E Sbjct: 61 VDVGEG---LLEMINPVITSCAGHETDSEGCLSIPGIVGDVTRASVIEVKGLDRRGKPLE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 ++A G LA +QHE+DHL G LF++ +++ Sbjct: 118 VKAKGYLARALQHEIDHLDGILFIEKAKNIRK 149 >UniRef50_Q2GE16 Peptide deformylase n=8 Tax=Rickettsiales RepID=DEF_NEOSM Length = 186 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 16/185 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L ++ PD L +V++ V ++ E + +DDM ETMY GIGLAA QV + +RIIV Sbjct: 1 MALLALIIEPDPLLHEVSEAVAGLSDEKRVFLDDMLETMYHCGGIGLAAVQVGVLERIIV 60 Query: 61 IDVS---------------ENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRA 104 +DV ++ +NPE++E S +EGCLS+PEQ + R Sbjct: 61 VDVPVGKEWHSSPLNHVGYKSSGGPYYFVNPEIIEFSQNLVPADEGCLSLPEQHYEIIRP 120 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + V ++ L+ DG+ L+A+G LA CIQHEMDHL G+L++ +LS LK +K ++ + Sbjct: 121 DAVVVKYLNYDGEECLLKANGWLARCIQHEMDHLNGRLYVSHLSKLKHDLAIKKAAEIKK 180 Query: 165 LKARA 169 + A Sbjct: 181 RHSEA 185 >UniRef50_Q1GDF5 Peptide deformylase n=18 Tax=Rhodobacterales RepID=Q1GDF5_SILST Length = 169 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 4/162 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ PD RL PV ++ ++DD+ ETMYA G GLAA QV + +R+ V Sbjct: 1 MSLLPIVQWPDPRLSTACAPVGAA-EDLGTLIDDVLETMYAAPGRGLAAPQVGVLKRVFV 59 Query: 61 IDVSENRDE--RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +DV +V+I PE+L +S +T + +E CLSIP + R K++IR D D Sbjct: 60 MDVDWKEGPRNPVVMIYPEVLWRSDDTTLAKEACLSIPGLSTRITRPTKIRIRWQDADRA 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 E DG A CIQHE DHL G++ D+ S +++ + + Sbjct: 120 AQEQTFDGFAARCIQHEYDHLDGRVTFDHFSSEERRLLEAQY 161 >UniRef50_C6V4P2 Peptide deformylase n=1 Tax=Neorickettsia risticii str. Illinois RepID=C6V4P2_NEORI Length = 205 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 16/170 (9%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L+++ PD L KV+ V V+ E + +DDM ETMY GIGLAA QV + +RIIV Sbjct: 21 MALLKLVIEPDPILHKVSGNVVGVSDEKREFLDDMLETMYHYTGIGLAAVQVGVLERIIV 80 Query: 61 IDVSENR---------------DERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRA 104 +DV ++ L+NPE++E S +EGCLS+PEQ + R Sbjct: 81 VDVPPDKEWHSSPLNHVGYESSGGPYYLVNPEIIEFSRNLVSADEGCLSLPEQNYEIVRP 140 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 + V ++ L+ +G+ L+A+G LA CIQHE+DHL GKL++ +LS LK Sbjct: 141 DAVVVKYLNYNGEECLLKANGWLARCIQHEVDHLDGKLYVSHLSKLKYDL 190 >UniRef50_A6TRW8 Peptide deformylase n=4 Tax=Clostridiales RepID=DEF_ALKMQ Length = 147 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LRK ++ V+++++ I ++DDM ETMY +G+GLAA QV I +++IV Sbjct: 1 MAIRLIRTDDDPVLRKKSRVVDKIDSRIHTLLDDMIETMYEADGVGLAAPQVGILKQVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E E LINPE+++++G EGCLS+P V R VK+R L+R GK E Sbjct: 61 IDVGEGVIE---LINPEIIKETGSQCDVEGCLSLPGHSGEVERPAIVKVRGLNRQGKMVE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 ++ LLA + HE+DHL G LF D + Sbjct: 118 IQGTELLARALCHEIDHLNGILFTDKI 144 >UniRef50_B4DC77 Peptide deformylase n=2 Tax=Verrucomicrobia RepID=B4DC77_9BACT Length = 187 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 17/183 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+++ + LR+ + V++V+ +I+++ DM ETM A G+GLAA Q+ + ++ VID Sbjct: 2 ILEIVKYGNPVLREKGREVKDVDEKIKQLSVDMLETMRAANGVGLAAQQIGVPIQMTVID 61 Query: 63 VSENRDER-----------------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAE 105 V+ D LVL+NP L + EGCLS P+ A + R+ Sbjct: 62 VAGIEDRPSAMWINDKEVPIEEHMPLVLLNPVLKFSEEKESGNEGCLSFPDITAEITRSS 121 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 V+ A DGK E EA GLLA +QHE DHL G LF+D ++ + I K+++L + Sbjct: 122 GVQCTATLLDGKKIEFEAAGLLARALQHETDHLHGVLFIDRMNAATKAGISGKLKRLQKE 181 Query: 166 KAR 168 Sbjct: 182 TKE 184 >UniRef50_A5FGV5 Peptide deformylase n=59 Tax=cellular organisms RepID=DEF_FLAJ1 Length = 196 Score = 205 bits (524), Expect = 4e-52, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 15/180 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L ++ D LRKV + ++ + +M+ETMY G+GLAA QV + RI VID Sbjct: 2 ILPIVGYGDPVLRKVGTAITPDYPNLKETIANMYETMYNAYGVGLAAPQVGLPIRIFVID 61 Query: 63 VSENRDE--------------RLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKV 107 + D+ + IN +++++ GE EGCLSIP+ R V R V Sbjct: 62 TTPFSDDEDLPADEQKDLKGFKRTFINAKIVKEEGEEWSFNEGCLSIPDVREDVYRKPTV 121 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 I + D DGL+A IQHE DH+ G LF D +S LK++ I++K++ + K Sbjct: 122 TIEYCEEDFVMKTEVFDGLIARVIQHEYDHIEGVLFTDKISSLKKRLIQKKLKNITEGKT 181 >UniRef50_B7RJW6 Peptide deformylase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJW6_9RHOB Length = 159 Score = 205 bits (522), Expect = 6e-52, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 4/156 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL ++ PD RL +V +PVE + I +++ DMF+TMYA G GLAA QV +RI V Sbjct: 1 MSVLDIVIWPDARLTQVCQPVEGITPGITQLIADMFDTMYAAPGRGLAAPQVGRSERIFV 60 Query: 61 IDVSENRDERLVL--INPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D + +NPE+++ S G EEGCLSIP + RA +V +R D +G Sbjct: 61 FDAGWKDGAPTPVACVNPEIIDLSEGRLTGEEGCLSIPNTPMDIERAAQVTLRWTDPEG- 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ 153 E G A+ +QHE DHL G + D + ++ Sbjct: 120 THERTFTGAEAVIVQHEYDHLDGIVIYDRVEKDVKK 155 >UniRef50_D1VET6 Peptide deformylase n=1 Tax=Frankia sp. EuI1c RepID=D1VET6_9ACTO Length = 205 Score = 205 bits (522), Expect = 6e-52, Method: Composition-based stats. Identities = 65/181 (35%), Positives = 89/181 (49%), Gaps = 20/181 (11%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + + D LR A PV + ++R+VDDM ETMYA G+GLAA QV + R+ V Sbjct: 1 MTVLPIRVLGDPVLRTPAGPVTVFDDRLRRLVDDMIETMYAAPGVGLAAPQVGVGLRLFV 60 Query: 61 IDVSENRDE--------------------RLVLINPELLEKSGETGIEEGCLSIPEQRAL 100 D + V+ NP L GE +EGCLSIP Sbjct: 61 FDTDWQPNRPDRHEDDAVPEAAGRARGRAPRVVANPVLELGPGEQNDQEGCLSIPGLHYA 120 Query: 101 VPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 RA +R +D G P E GLLA C+QHE DHL G L++D L+ L ++ ++ + Sbjct: 121 TARAAAATVRGVDAAGDPVEYAGTGLLARCLQHEADHLAGTLYVDRLTGLTRRSAQRALR 180 Query: 161 K 161 Sbjct: 181 D 181 >UniRef50_D0LH18 Peptide deformylase n=2 Tax=Nannocystineae RepID=D0LH18_HALO1 Length = 175 Score = 205 bits (522), Expect = 7e-52, Method: Composition-based stats. Identities = 65/166 (39%), Positives = 107/166 (64%), Gaps = 5/166 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL ++ PD RLR+ + VE+V+ ++ + ++ +TMY+ G+G+AA Q+ ++ + Sbjct: 1 MAVLPIVVWPDARLRQETRRVEQVDDAVRDLYRNLVDTMYSLNGLGIAAVQIGDPTQMFI 60 Query: 61 IDVS----ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ++ + + DE + INPE++ S ++ EEGCLS P V R K ++RAL D Sbjct: 61 VEPALAGRDANDEPVAFINPEVVWTSEDSDKSEEGCLSFPGIYVQVDRPAKARVRALGID 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G+ FE+EA+GL A C+ HE DHL GKL +D++ PLK+Q IR+K+ + Sbjct: 121 GEIFEVEAEGLFARCLLHENDHLTGKLLVDFVGPLKRQMIRRKLNR 166 >UniRef50_B5YF46 Peptide deformylase n=2 Tax=Dictyoglomus RepID=DEF_DICT6 Length = 153 Score = 205 bits (522), Expect = 7e-52, Method: Composition-based stats. Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 3/144 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ + D L+ AK VE+++ +++ + DM ETM G+GLAA QV RIIV+D Sbjct: 2 IREIRKVGDPILKTKAKKVEKIDEKVKELARDMIETMKFCNGVGLAAPQVGESLRIIVVD 61 Query: 63 VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 +N +VLINPE++E SGE EGCLS+P V RAE++ +A D DG+ + Sbjct: 62 YEDN---PIVLINPEIIEMSGEELDYEGCLSVPGVEVPVKRAERIVFKAQDLDGRTKKYR 118 Query: 123 ADGLLAICIQHEMDHLVGKLFMDY 146 A GLLA +QHE+DHL G L +D Sbjct: 119 AKGLLARVVQHEVDHLDGMLILDR 142 >UniRef50_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chloroflexi bacterium RepID=Q2Z018_9CHLR Length = 176 Score = 204 bits (521), Expect = 9e-52, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 12/157 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ +++ PD LR+ A+ V + E+Q ++DDM ETM + G+GLAA QV ++I Sbjct: 1 MSIREIVFTPDPVLRRKARKVTDFGPELQTLIDDMVETMRSAPGVGLAAPQVAESWQVIT 60 Query: 61 IDVSEN-----------RDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVK 108 I+ SE + L+NP++ S ET + EGCLS+P V R E V Sbjct: 61 IEYSEESEEGEEGEEKVPPKLYTLVNPQITRASNETIVGTEGCLSVPGIVGEVERNEAVT 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 ++A +R G+P ++A LA QHE+DHL G LF D Sbjct: 121 VKAQNRRGQPVTIKAQDWLARIFQHEIDHLEGVLFTD 157 >UniRef50_B0VID6 Peptide deformylase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VID6_9BACT Length = 186 Score = 204 bits (521), Expect = 9e-52, Method: Composition-based stats. Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 4/165 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V D+ LRK ++ + ++D+ TMYA +GIG+AA QV R+IVID Sbjct: 7 ILPVRLYGDDFLRKKLPEIDYNTPGLPEFIEDLIYTMYARDGIGIAANQVGSFYRMIVID 66 Query: 63 VSE----NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 + N+ +V+INP + K GE EEGC+S+P+ A V R++K+ DR G Sbjct: 67 PEQDNKLNKKSPIVMINPVIENKEGEVVYEEGCISLPDIFADVSRSKKITYSYTDRMGNR 126 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 A+ + A+ IQHE DHL G LF+D+L L + +I K++KL Sbjct: 127 ITETAEEIKAVVIQHEFDHLEGILFIDHLGTLDRLKIMHKLKKLQ 171 >UniRef50_Q3ZXA9 Peptide deformylase n=5 Tax=Dehalococcoides RepID=DEF_DEHSC Length = 167 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 61/152 (40%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +P+ LRK AK V ++ IQ ++DDM ETM + +G GLAA QV + R++V Sbjct: 1 MAIRRICELPEPVLRKKAKKVPSIDGSIQTLIDDMIETMNSADGAGLAAPQVGVSLRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + E VLINPE+++K G+ + EGCLSIP + RAE V + LDR GK Sbjct: 61 FREPDTK-EATVLINPEIVKKEGQRQVTEGCLSIPGYFGELTRAETVTAKGLDRHGKACR 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 ++ G++A ++HE +HL G L++D+L Q Sbjct: 120 IKGTGIVAQLLEHETEHLDGILYIDHLESEDQ 151 >UniRef50_C5VIH1 Peptide deformylase n=2 Tax=Prevotella RepID=C5VIH1_9BACT Length = 186 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 9/176 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 VL + LRKVA+ + ++Q ++ +MFET A +G+GLAA Q+ R++V+D Sbjct: 2 VLPIYTYGQPVLRKVAEDIPLDYPDLQELIQNMFETNTASDGVGLAAPQIGKSIRVVVVD 61 Query: 63 -------VSENRDERLVLINPELLEK--SGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 E +D R IN +LE S +EEGCLS+P V RA++V ++ D Sbjct: 62 LDVLSDTFPEYKDYRHAFINGHILEYDDSETETLEEGCLSLPGVHESVTRAKRVYVKWYD 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + E DG LA IQHE DHL G++F D LS ++Q I K++ L + K R Sbjct: 122 ENLVEHEEWIDGYLARVIQHEFDHLEGRVFTDRLSAFRKQMITSKLKALLQGKVRC 177 >UniRef50_A3EQF2 Peptide deformylase n=3 Tax=Leptospirillum RepID=A3EQF2_9BACT Length = 184 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 68/180 (37%), Positives = 97/180 (53%), Gaps = 14/180 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++L++ + + LRK+A+P+ E E Q VDDM ETM +G+GLAA QV + ++ Sbjct: 1 MALLKIAKMGNPILRKIAEPISPKEIETDEFQTFVDDMIETMRDSDGLGLAAPQVHVSKQ 60 Query: 58 IIVIDVSENRDER-------LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKI 109 ++VI+ EN LVLINP S ET EGCLS+ R V R+ VK+ Sbjct: 61 VVVIESMENDRYPDAPPIPLLVLINPVFKYMSKETRTGWEGCLSVDNLRGKVTRSRAVKM 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 ALDR G LE + A+ +QHE DHL G LF+D + K ++E+ + R Sbjct: 121 EALDRHGNTITLEWEDFPAVVLQHETDHLRGHLFLDRM---KDMSTLTQLEEFQKFWVRG 177 >UniRef50_B1ZMD5 Peptide deformylase n=2 Tax=Verrucomicrobia RepID=DEF_OPITP Length = 192 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 19/187 (10%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS L+++H D LR+ + + + + ++ +M TM GIGLAA Q+ ++ V Sbjct: 1 MS-LRIVHYNDPVLRRKGEKITAFDKALSQLAKEMLATMQEAAGIGLAAQQIGRPVQLCV 59 Query: 61 IDVS----------ENRDERLVLI------NPELLEKSGETGI--EEGCLSIPEQRALVP 102 +D+ + L LI NPE+ EEGCLS P+ R VP Sbjct: 60 VDLRRAEIDFTWELDGAKPPLDLIMPMIITNPEITPDRETDVYLVEEGCLSFPKIRGDVP 119 Query: 103 RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 R + + +R D G P L DGLLA CIQHE+DHL G LF+D + + I V+ L Sbjct: 120 RPDAITVRYQDEHGTPHTLHCDGLLARCIQHEVDHLNGVLFIDRMEKKTRAAIDADVKTL 179 Query: 163 DRLKARA 169 ++ A Sbjct: 180 AKITRAA 186 >UniRef50_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FF41_9CHLO Length = 257 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + P LR K V +++++++ MF+ MY EG+GLAA QV ++ R++V + Sbjct: 84 LAIQKYPHASLRNDNKIVGVFDSDLEKLAQAMFKIMYDTEGVGLAAPQVGVNYRMMVYNE 143 Query: 64 S--ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + +VL+NP++++ S EEGCLS P+ A V R V++ A + GK F+ Sbjct: 144 AGEPGRGKEVVLVNPKIVKFSKTKDLFEEGCLSFPKIYADVERPTSVQVEAQNLRGKKFK 203 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + DG A QHE DHL G LF D ++ + ++ +++ L Sbjct: 204 MTLDGFEARVFQHEYDHLDGVLFHDRMTDEVRGTVQGELDAL 245 >UniRef50_A8U9S1 Peptide deformylase n=14 Tax=Lactobacillales RepID=A8U9S1_9LACT Length = 164 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 1/147 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL +L PD L K V E+ EI ++++DM+ETM A +GIG+AA QV+ + R+ + Sbjct: 1 MSVLPILKYPDPMLITPTKEVTEITDEIVQLLEDMYETMVANDGIGIAAPQVNSNLRLAI 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ E +INP ++ +GET EGCLS PE + RA+ + +R DR+G FE Sbjct: 61 VEIDEESG-LYEMINPRIVHATGETIDVEGCLSFPEVFGTIKRADTIVLRYYDRNGDEFE 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +EAD L+ QHE++HL GKLF D + Sbjct: 120 VEADDYLSRAFQHELEHLDGKLFTDKI 146 >UniRef50_Q1AVZ8 Peptide deformylase n=2 Tax=Bacteria RepID=Q1AVZ8_RUBXD Length = 164 Score = 203 bits (519), Expect = 1e-51, Method: Composition-based stats. Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 5/162 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++ D L+ A PV+ + + R+ ++MFETM EG+GLAA QV +RI V Sbjct: 1 MA-LEMRTFGDPVLKSRAAPVKTFDGALARLAEEMFETMREHEGVGLAANQVGRLKRIFV 59 Query: 61 IDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +V D RLV++NP + E S T EEGCLSIP R V R V + + DG P Sbjct: 60 AEV---EDRRLVVVNPAIEEASERTERAEEGCLSIPGVRVEVERPAAVVLTGQNLDGSPL 116 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +EA+GLLA +QHE DHL G L +D + ++ +++ + Sbjct: 117 RIEAEGLLARVLQHETDHLDGVLILDRVDRETRRAALRELRE 158 >UniRef50_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UN70_AKKM8 Length = 182 Score = 203 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 17/178 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L++ + L++ +PVE + ++ + ++M ETMYA EGIGLAA QV I +++VID Sbjct: 2 LLEIAQYGNPVLKEKCRPVEHFDDSLKTLAENMLETMYAAEGIGLAAPQVSIPIQLVVID 61 Query: 63 VSENRDE-----------------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAE 105 + + + L+ NP L EGCLS+ + RA V R + Sbjct: 62 IPKEEESVTWLKVNGEDKELSDIMPLMFANPVLEPYGPMHPFHEGCLSVMKIRASVVRPD 121 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 VK L DG+ ++ +GLLA C+QHE DHL G LF++ +S ++ +R K+++L Sbjct: 122 FVKATVLLIDGREITIDCNGLLARCLQHECDHLNGILFVERVSSAQKITLRNKLKRLA 179 >UniRef50_B9XGP3 Peptide deformylase n=1 Tax=bacterium Ellin514 RepID=B9XGP3_9BACT Length = 191 Score = 203 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 18/180 (10%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS L+V+ LRK + V V +EI++ + DMFETMY GIGLAA QV +I V Sbjct: 1 MS-LKVIKYGHPVLRKKGEKVTRVTSEIKQFIKDMFETMYESRGIGLAAQQVARAVQITV 59 Query: 61 IDVSENRDER-----------------LVLINPELLEKSGETGIEEGCLSIPEQRALVPR 103 IDV D LVLINPE+ + EGCLS PE A + R Sbjct: 60 IDVRGITDRPSTLELNGKPASVEKFMPLVLINPEVKPVGPKVAGTEGCLSFPEIFAEITR 119 Query: 104 AEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E V + A++ +G+ E A GLLA +QHE DHL G LF+D + +Q ++ ++E+L Sbjct: 120 PETVDVVAMNENGERIEFRAGGLLARAVQHETDHLNGILFIDRMDTETKQELKPELEELQ 179 >UniRef50_B3DUG9 Peptide deformylase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DEF_METI4 Length = 190 Score = 203 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 69/181 (38%), Positives = 107/181 (59%), Gaps = 16/181 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+++ + LRK P++ + ++R+V DM ETM +G+GLAA QV ++ ++ VID Sbjct: 2 ILKLVLYDNPILRKKGMPIDSFDDRLKRLVQDMLETMAYYKGVGLAAQQVGLNLQLAVID 61 Query: 63 VSE----------------NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEK 106 VS L LINP L + EGCLS P R VPR+++ Sbjct: 62 VSGSKLSSSLLIGGKPAMVEEHMPLFLINPTLSYTQSKEISNEGCLSFPGLRIDVPRSKR 121 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 VK++ D +G+P+ EA G L++ IQHE DHL GKLF+DYLS +++ I++++EK+ R + Sbjct: 122 VKVKTFDLEGRPWYFEAGGFLSVAIQHEFDHLQGKLFIDYLSAEQKKAIKEELEKIKRGE 181 Query: 167 A 167 A Sbjct: 182 A 182 >UniRef50_D0U631 Peptide deformylase n=2 Tax=uncultured actinobacterium RepID=D0U631_9ACTN Length = 180 Score = 203 bits (517), Expect = 2e-51, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 3/164 (1%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 + D L +A + ++ ++ + +DMF MY G+GLA Q+ + ++I V DV + Sbjct: 12 IRTYGDPVLAAMADEITNIDGKLVTLAEDMFRVMYQAPGLGLAGPQIGVQKQIFVYDVDD 71 Query: 66 NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 + V+INP+++E SGE +EGCLSIP + R +KV + +G ++EAD Sbjct: 72 D---PQVIINPKIVESSGEWVYDEGCLSIPGLYVEMLRPKKVLVSGFTLEGDEVQIEADE 128 Query: 126 LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LLA QHE+DHL G L D + P +++ + K+ A A Sbjct: 129 LLARLFQHEIDHLQGVLMFDRMLPDQRELAIVEYAKVGDNPANA 172 >UniRef50_Q72H33 Peptide deformylase n=8 Tax=Deinococci RepID=DEF_THET2 Length = 192 Score = 203 bits (517), Expect = 2e-51, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 20/185 (10%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI- 61 V + D LR+ A+PVE+ + I+R+ +DM ETM+ +G+GLAA Q+ + QR+ V Sbjct: 2 VYPIRLYGDPVLRRKARPVEDF-SGIKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFVAV 60 Query: 62 ---DVSENRDER---------LVLINPELLEKSGETGIEEGCLSIPEQR-ALVPRAEKVK 108 D E +ER V+ NP + + G EGCLS+P VPRAE+++ Sbjct: 61 EYADEPEGEEERPLRELVRRVYVVANPVITYREGLVEGTEGCLSLPGLYSEEVPRAERIR 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI----RQKVEKLDR 164 + D +G+ LE +G +A QHE+DHL G LF + L K++ R ++ + + Sbjct: 121 VEYQDEEGRGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKREAFLEANRAELVRFQK 180 Query: 165 LKARA 169 +ARA Sbjct: 181 -EARA 184 >UniRef50_D1ATH4 Peptide deformylase n=1 Tax=Anaplasma centrale str. Israel RepID=D1ATH4_ANACI Length = 199 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 62/180 (34%), Positives = 106/180 (58%), Gaps = 20/180 (11%) Query: 2 SVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 SVL ++ +PD RL ++ V ++ +++ + +DM +TMY +GIGLAA QV +H+RI Sbjct: 13 SVLPLVTLPDSRLSLCSEEVHADDFGQQLETLANDMLDTMYHNKGIGLAAVQVGVHKRIF 72 Query: 60 VIDVSENRDE-----------------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALV 101 V+D+ D V++NP ++E+S +EEGCLS+P+ R V Sbjct: 73 VVDLEYGSDRYEVPRDDGAGEFRATCGPTVVVNPVIVEESERLVAMEEGCLSVPDYRETV 132 Query: 102 PRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 R E + ++ +D + + ++A GLLA C+QHE+DHL G +F+ +S LK+ + +K+ + Sbjct: 133 RRPESIVVQYVDLNRRQKYIKACGLLARCLQHELDHLNGVVFLQRISKLKRDMVMEKIRR 192 >UniRef50_A0Q456 Peptide deformylase n=18 Tax=Francisella RepID=A0Q456_FRATN Length = 174 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 17/179 (9%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 MS L++L P L++VAK V +E+N +++ + +M E M G+GLAA QV I +R Sbjct: 3 MS-LEILKYPHPVLKEVAKEVTKDEINDDLRATIAEMHELMLEANGVGLAAIQVGIKKRF 61 Query: 59 IVIDVSENRDERLVLINPELL--------EKSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 ++ +N +E+ NP+++ E+SG+ EEGCLS P A V RA VKI+ Sbjct: 62 FIM--YDNLEEQ----NPKIITIINPEIIEQSGKIIDEEGCLSFPGVSAKVNRATTVKIK 115 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 AL+ G E+E DG LA CIQHE+DHL G F D+L LK++ I +K +KL + A++ Sbjct: 116 ALNEFGDEIEIEKDGFLARCIQHEIDHLNGITFFDHLGSLKRKMIEKKYKKLMQENAKS 174 >UniRef50_C7R2E5 Peptide deformylase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R2E5_JONDD Length = 215 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ D LR+ A V E + + ++V DM++TM G+GLAA Q+ + QRI V D Sbjct: 2 IHPIVIDGDPVLRQRAAEVTEFDDALVQLVADMYDTMRVSNGVGLAAPQIGVGQRIFVFD 61 Query: 63 VS-ENRDERLVLINPEL----------LEKSGE-----TGIEEGCLSIPEQRALVPRAEK 106 E+ R V++NP L L+ G+ EGCLS P R Sbjct: 62 APDEDEQRRGVVVNPSLMIVQRPPRFALKGEGKRPPKSLTDVEGCLSFPGPDFEAKRHYA 121 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 V++ D G+P ++ +G A +QHE DHL G L++D L + R Sbjct: 122 VRVTGWDEHGEPVVIDGEGWFARVLQHEYDHLDGLLYVDRLKGRDKAEAR 171 >UniRef50_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula baltica RepID=DEF_RHOBA Length = 201 Score = 202 bits (516), Expect = 3e-51, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 2/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L ++H P LR V++P+ V+A+++ + D+M + MY +G+GLAA QVD+ R+ V + Sbjct: 3 LSIIHFPHPTLRHVSRPIVRVDAKLKSMADEMLDLMYEFDGVGLAANQVDLPIRMFVANP 62 Query: 64 SENRDE--RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + RDE V++NPE+ G +EGCLS+P V R + V++R D G Sbjct: 63 TGKRDEGESWVILNPEIDRPKGNDTAQEGCLSVPGLYGQVKRPKTVRLRGFDLQGNEINQ 122 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 DG +A +QHE+DHL G +F D + + + +E+ Sbjct: 123 VLDGFMARVVQHEVDHLDGIMFFDRIGEEGLRDLEGHLEEFK 164 >UniRef50_P73441 Peptide deformylase n=10 Tax=Cyanobacteria RepID=DEF_SYNY3 Length = 187 Score = 202 bits (516), Expect = 3e-51, Method: Composition-based stats. Identities = 57/159 (35%), Positives = 98/159 (61%), Gaps = 4/159 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ ++ D+ LR+ AK + +V+ I+++ +M +TMY+ GIGLAA QV I+++++V+D Sbjct: 17 LELHYLGDKVLRQPAKRIAKVDDSIRKLAKEMLQTMYSANGIGLAAPQVGINKQLLVVDC 76 Query: 64 SENR--DERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ + L++INP++ S E +EEGCLS+P V R +++ D G+P + Sbjct: 77 EQDKPDEPPLIMINPQITRTSEELCVVEEGCLSVPNVYMDVTRPRAIEVTYKDEHGRPQK 136 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL-SPLKQQRIRQK 158 L A IQHEMDHL G +F+D + +PL +K Sbjct: 137 RLFAELTARVIQHEMDHLNGVMFVDRVDNPLALAESLKK 175 >UniRef50_Q1CVW8 Peptide deformylase n=2 Tax=Cystobacterineae RepID=Q1CVW8_MYXXD Length = 168 Score = 202 bits (516), Expect = 3e-51, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 3/168 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ ++ P + L KPV + ++ +++ M E+M EGIG+AA QV R+ + Sbjct: 1 MA-RDIVIWPHKVLTSSTKPVTDFGPPLETLLEQMAESMKEAEGIGIAANQVGESLRVAL 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + ++NP++LEK +EEGCLS+P + PR KVK+R D+ + E Sbjct: 60 V--GREDGTFFEIVNPQILEKKEPVTMEEGCLSVPREWEKCPRFHKVKVRYQDKSAEWHE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LEA+G LA +QHE+DHL G +F+D+LS LK+ I +++KL ++KAR Sbjct: 118 LEAEGRLAHVLQHEIDHLDGHVFVDHLSSLKRTLILDRMKKLQKVKAR 165 >UniRef50_A1AXL8 Peptide deformylase n=4 Tax=Gammaproteobacteria RepID=A1AXL8_RUTMC Length = 185 Score = 202 bits (516), Expect = 3e-51, Method: Composition-based stats. Identities = 76/165 (46%), Positives = 104/165 (63%), Gaps = 21/165 (12%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L +L+ PD+RLR AK V ++ IQ ++ DMFET+YA++GIGLAATQVD H +++VID Sbjct: 2 ILPILNYPDKRLRTKAKHVNVIDETIQTLIKDMFETIYAKDGIGLAATQVDQHLQVVVID 61 Query: 63 VSEN---------------------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALV 101 + N + L INP + EK G+ EGCLS+P+ +A V Sbjct: 62 LEPNSQDDYQLFLKNFQRSSHKQSQKHHPLCFINPRIKEKDGQEKHIEGCLSVPDFQAEV 121 Query: 102 PRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 RA +K+ AL+ G+ F L+A GLLAICIQHE+DHL G LF+DY Sbjct: 122 QRANHIKVEALNEKGEVFTLQATGLLAICIQHELDHLKGVLFVDY 166 >UniRef50_B3E344 Peptide deformylase n=11 Tax=Bacteria RepID=B3E344_GEOLS Length = 169 Score = 201 bits (514), Expect = 5e-51, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 8/166 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+V +L P L+K+A V ++ I +V D+ +TM A G +G+AA Q+ + R+ Sbjct: 1 MAVQPILKYPHPLLKKMAHRVAALDEPIHTLVQDLIDTMQAGPGSVGVAAPQIGVGLRVC 60 Query: 60 VIDVSENRDER------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V+DVS +R + L ++NPE++ +SG + EGC+S+P+ V RA ++ +R LD Sbjct: 61 VVDVSNSRHGKDNNHGLLCMVNPEIISRSGLAVMREGCMSVPDYTGDVERATEITVRFLD 120 Query: 114 -RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 R G+ E+ A G A+ IQHEMDHL G LF+D + + R+K Sbjct: 121 SRSGQQREVAASGFEAVAIQHEMDHLDGLLFLDRIISVSTGLFRRK 166 >UniRef50_Q9FCA2 Peptide deformylase 2 n=4 Tax=Streptomyces RepID=DEF2_STRCO Length = 179 Score = 201 bits (514), Expect = 6e-51, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V + + D L V + E+ +V+D+F TMYA G+GLAA QV R+ V D Sbjct: 13 VRPLGLLGDPVLHARCAEVTDFGPELAALVEDLFATMYAAHGVGLAANQVGEAVRVFVYD 72 Query: 63 VSENRDERLV--LINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ DER + ++NP L+E G EGCLS+P A R ++ + G+P Sbjct: 73 CPDDEDERHLGHVVNPRLVETGGVVVRGPEGCLSLPGLEAGTERYDEAVVTGFTVAGEPV 132 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 + G A C+QHE DHL G+++ D L+ + +++ ++V + Sbjct: 133 TVRGTGFFARCLQHECDHLEGRVYADRLTGRRHRKLMRQVAR 174 >UniRef50_Q8UF49 Peptide deformylase-like n=19 Tax=Rhizobiales RepID=DEFL_AGRT5 Length = 164 Score = 201 bits (513), Expect = 7e-51, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L P L + PV + ++ +V D+ +TM A G+G+ A + + QR+ V Sbjct: 1 MAIRPILPYPHAGLSGICAPVTVFDDHLRELVTDLIDTMRAAPGVGITAAHIGVLQRVFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++++ L INPE+ S +T EG +S+P V R V++R D G Sbjct: 61 LELTP--GTILTYINPEITSHSPQTMRHVEGSVSMPGFTDEVERPSTVEVRFQDITGAEQ 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 A+G AICIQHE+D L G ++ LS LK+ R+ +K EK Sbjct: 119 TETAEGFHAICIQHEIDQLDGIFWLKRLSRLKRDRLVKKWEK 160 >UniRef50_D2NSH9 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothia mucilaginosa RepID=D2NSH9_9MICC Length = 214 Score = 201 bits (513), Expect = 7e-51, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + + D LR V P+ + ++ R++DDM ETMY G+GLA QV I ++I Sbjct: 17 MTILSIRTVGDPVLRSVCDPITVFDDDLARLIDDMLETMYDVGGVGLAGPQVGISKQIFT 76 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 D +INP L + EGCLS+P Q++ PR ++ +DR G+P Sbjct: 77 F--GGIDDREGYIINPVLEVGEEDQEGGEGCLSVPGQKSATPRKNWARVTGVDRHGEPLV 134 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LE +GL A +QHE DHL GKLF+D L +QR+ + + D A Sbjct: 135 LEGEGLFARMLQHETDHLHGKLFIDRLVGEDRQRVMRALRAADYNNVAA 183 >UniRef50_C7CNZ7 Peptide deformylase n=24 Tax=Enterococcus RepID=C7CNZ7_ENTFA Length = 169 Score = 201 bits (513), Expect = 8e-51, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 V+ P+E L+ A+PV + EI ++++DM+ETM A +GIGLAA Q+ + ++ VI++ Sbjct: 9 PVVIHPNEHLKMKAQPVTIITDEIVQLLEDMYETMLAHDGIGLAAPQIGKNLQMAVIEID 68 Query: 65 ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E LINP ++EK G + EGCLSIPE V RA++V +R DR+G+ E+ A Sbjct: 69 EESGH-FELINPVIIEKKGTSIDVEGCLSIPETYGTVERADEVTVRYFDREGEEMEVTAY 127 Query: 125 GLLAICIQHEMDHLVGKLFMDYL 147 G LA QHE+DHL G+LF+D + Sbjct: 128 GYLARAFQHEIDHLNGELFIDKM 150 >UniRef50_C1DV92 Peptide deformylase n=4 Tax=Hydrogenothermaceae RepID=C1DV92_SULAA Length = 179 Score = 201 bits (512), Expect = 9e-51, Method: Composition-based stats. Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 9/169 (5%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 ++ PD+ L++ K ++ + ++ +D M+E MY EEG+GLAA Q+ I +I+VID S Sbjct: 4 RIRTWPDKILKEPTKEIDFFDDRLKEYIDKMWEFMYKEEGVGLAANQIGIPYQILVIDTS 63 Query: 65 ------ENRDER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 E E +VLINP+++EK G+ EGCLS P + +PR ++VK+ + Sbjct: 64 IREKKNEEETEPPVKMVLINPKIVEKEGQVMSTEGCLSFPGVQITIPRYKRVKVVGKNEK 123 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 G+ +E+ L+I +QHE+DHL G F+ YLSPLK++ + K K + Sbjct: 124 GEDVVVESSEFLSIVLQHEIDHLNGIPFISYLSPLKRKLVLDKYLKSLK 172 >UniRef50_Q2S316 Peptide deformylase n=2 Tax=Rhodothermaceae RepID=DEF_SALRD Length = 195 Score = 200 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 12/160 (7%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + E LR PV+E +Q ++D+M ETM+ GIGLAA QV +R+ V+D Sbjct: 2 ILPIYVYGHEALRNETDPVQENTEALQELIDNMIETMHNAAGIGLAAPQVGRTERLFVVD 61 Query: 63 VSENRDE-----------RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIR 110 ++ DE +V INPE++E+S +T +EEGCLSIPE R V R E++++R Sbjct: 62 LTPMADEIAEAGEPLPPQPMVFINPEIVEESEDTAEMEEGCLSIPEVREAVARPERIRMR 121 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 DR+ + ELEA G+L+ +QHE DHL G LF DYLS Sbjct: 122 YRDREFEEQELEAGGMLSRVLQHERDHLDGVLFTDYLSSF 161 >UniRef50_Q2J9M0 Peptide deformylase n=1 Tax=Frankia sp. CcI3 RepID=Q2J9M0_FRASC Length = 230 Score = 200 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 43/204 (21%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + + D LR V E + + R+V DM +TMY G+GLAA Q+ + R+ V Sbjct: 1 MTVLPIRTVGDPVLRTPTTLVTEFDTALGRLVTDMIDTMYDAPGVGLAAPQIGVGLRLFV 60 Query: 61 IDVS-----------------------ENRDERLVLINPELLEKSGET------------ 85 DV + P +++SGET Sbjct: 61 FDVDYDPRDESVPRVPRVVVNPVLELGPDPGRPGETQRPGGIQRSGETQRSGETQRSGET 120 Query: 86 --------GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDH 137 EGCLS+P RA ++R +D G+P E +GLLA C QHE+DH Sbjct: 121 QRSGETQQHGPEGCLSVPGLHFPTTRALAARVRGVDVTGQPVEYAGEGLLARCFQHEVDH 180 Query: 138 LVGKLFMDYLSPLKQQRIRQKVEK 161 L G L++D L+ ++ Q + + Sbjct: 181 LDGILYVDRLTGEARRAAVQALRE 204 >UniRef50_C3J9U8 Peptide deformylase n=7 Tax=Bacteria RepID=C3J9U8_9PORP Length = 190 Score = 200 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 8/173 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + LR+VA+ + + ++ +M+++MY +GIGLAA Q+ R++VID Sbjct: 1 MLPIYLYGHPVLREVAQDITPEYPNLSGLIAEMWKSMYESDGIGLAAPQIGKSIRLLVID 60 Query: 63 -------VSENRDERLVLINPELLEKSGETGIEE-GCLSIPEQRALVPRAEKVKIRALDR 114 E +D + V+IN + E S ET EE GCLS+P V R +++ I LD Sbjct: 61 ASPMAEYFPECKDFKTVMINARITELSEETLSEEEGCLSLPGIHERVERPKEITIEYLDE 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 P G A +QHE DHL GKLF D++S L++ ++ K+ ++ KA Sbjct: 121 QFTPQTRHLTGFAARVVQHEYDHLEGKLFTDHVSTLRKSLLKNKLARIASGKA 173 >UniRef50_UPI0001C165F0 Polypeptide deformylase n=1 Tax=Raphidiopsis brookii D9 RepID=UPI0001C165F0 Length = 218 Score = 200 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 99/143 (69%), Gaps = 3/143 (2%) Query: 8 HIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENR 67 ++ D LR+ AK + +++ E+++++ DM +TMY+E+GIGLAA QV ++++++VID + ++ Sbjct: 49 YLGDRVLRQPAKRITKIDDELRQLIRDMLQTMYSEDGIGLAAPQVGVNKQLVVIDCNPDK 108 Query: 68 DE--RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E LVLINP + + S E + +EGCLSIP+ V R + V+I D G+P L+AD Sbjct: 109 PEIPPLVLINPVIKQVSSELCVAQEGCLSIPKVFLEVKRPKIVEIAYKDEYGRPQTLKAD 168 Query: 125 GLLAICIQHEMDHLVGKLFMDYL 147 LLA CI HEMDHL G +F+D + Sbjct: 169 NLLARCILHEMDHLNGVVFVDRV 191 >UniRef50_A2BU25 Peptide deformylase n=50 Tax=cellular organisms RepID=DEF_PROM5 Length = 203 Score = 200 bits (509), Expect = 2e-50, Method: Composition-based stats. Identities = 63/161 (39%), Positives = 103/161 (63%), Gaps = 5/161 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ + ++ LR AK + +V+ + + + DM ++MY+ +GIGLAA QV I + ++VID+ Sbjct: 31 LEIFKLGNDVLRTNAKRIGKVDLDTRNLAKDMLKSMYSAKGIGLAAPQVGISKELLVIDI 90 Query: 64 S--ENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + ++ E L+LINPE+ EEGCLSIP V R +K+R D G+P + Sbjct: 91 NFEDSAAEPLILINPEITAFGNTLNSYEEGCLSIPGVYLNVVRPSTIKLRFSDEMGRPRK 150 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 + ADGLLA CIQHE+DHL G LF+D ++ ++ ++ +++K Sbjct: 151 MNADGLLARCIQHEVDHLRGVLFVDRVTS--KEDLKTELKK 189 >UniRef50_C0ZE47 Peptide deformylase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE47_BREBN Length = 175 Score = 200 bits (509), Expect = 2e-50, Method: Composition-based stats. Identities = 67/164 (40%), Positives = 104/164 (63%), Gaps = 4/164 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+ ++ + D LR+ +K V+ + ++++I+DDM +T+YA +G GL+A Q+ I +R++ Sbjct: 1 MAERMIVRLGDPILRETSKRVQSITPQVEKILDDMVQTIYAAKGRAGLSAIQIGIPKRLV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 V+D E LINP L+EKSGE +E CLSIP +V RA VK++ L+R G+ Sbjct: 61 VMDCGSGLIE---LINPVLMEKSGEQVGQEACLSIPGVFGIVRRANYVKVQTLNRQGETK 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 +EA+ LA CIQHEMDHL G LF+D+ L + +K+ + D Sbjct: 118 TIEAEDFLARCIQHEMDHLEGILFIDHTEELYSAKTGKKLNRKD 161 >UniRef50_Q9K4A0 Peptide deformylase 4 n=7 Tax=Streptomyces RepID=DEF4_STRCO Length = 216 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 6/164 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 + + + L K + V + E Q++V DMF + EG+GLAA Q+ + +++ V D Sbjct: 42 RPITVVGNPVLHKECEDVTDFGEEFQQLVADMFASQRTAEGVGLAANQIGVSKKVFVYDC 101 Query: 64 SENRDERLV--LINPELLEKSGE----TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ++ R V + NP L+E + EGCLS+P A + R + ++ D G Sbjct: 102 PDDEGVRHVGVVCNPRLVELPADRRRLDDSNEGCLSVPTAYAPLARPDYAEVTGQDEKGN 161 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 P ++ G A C+QHE DHL G L++D LS +++ +++ + Sbjct: 162 PVKVRGTGYFARCLQHETDHLYGYLYIDRLSKRERKDALRQMAE 205 >UniRef50_Q0RM09 Peptide deformylase n=4 Tax=Actinomycetales RepID=Q0RM09_FRAAA Length = 190 Score = 198 bits (506), Expect = 4e-50, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 14/170 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + + D LR V +A + R+V DM +TMY G+GLAA Q+ + R+ V D Sbjct: 1 MLPIRTVGDPVLRTPTALVTTFDAALARLVHDMIDTMYDAPGVGLAAPQIGVGLRVFVFD 60 Query: 63 VSENRDERLV-----------LINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRA 111 V + + V L EL + +EGCLS+P RA + +R Sbjct: 61 VGYDPRDVTVPRVPRVVVNPVL---ELAADGEQQEGQEGCLSVPGLHFSTTRALRASVRG 117 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +D G E +GLLA C QHE+DHL G L++D L+ +++ Q + + Sbjct: 118 VDVTGAAVEYAGEGLLARCFQHEVDHLDGTLYLDRLTGEERRAAVQALRE 167 >UniRef50_Q0BUX2 Peptide deformylase n=11 Tax=Alphaproteobacteria RepID=Q0BUX2_GRABC Length = 209 Score = 198 bits (506), Expect = 5e-50, Method: Composition-based stats. Identities = 66/165 (40%), Positives = 87/165 (52%), Gaps = 6/165 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVN-AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 MS+L++ + L + A PV + EIQR+ DM ETM G+GLAA QV R+ Sbjct: 29 MSILKIARMGHPVLLRRADPVPDPTAPEIQRLALDMIETMIDAPGVGLAAPQVYQSLRMF 88 Query: 60 VIDVSENRDE----RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDR 114 V V +R VLINPEL E + EGCLSIP R VPRA +V+ R + Sbjct: 89 VFRVPVSRGGEEVSPTVLINPELEWVGDEIQMCWEGCLSIPGFRGEVPRAMRVRYRGIGL 148 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 DG E EA G A IQHE DHL G L+ ++ L + +++ Sbjct: 149 DGAVIEREASGFHANVIQHEYDHLDGILYPMRMNDLGRLGFEEEI 193 >UniRef50_D1R4B7 Peptide deformylase n=2 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B7_9CHLA Length = 178 Score = 198 bits (506), Expect = 5e-50, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 11/173 (6%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + D LRK VE+++++++++V+DM ET+ A GIGLAA QV + + V Sbjct: 3 LPLAFYGDPILRKKCARVEQIDSQLKQLVNDMVETLEAHRGIGLAAPQVHHELNLFITKV 62 Query: 64 S-------ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRD 115 E+ V +NP++L S E EGCLSIP A V R + ++ D D Sbjct: 63 PIRYKNGKEDSGNLHVFVNPKILAYSEEKNRYTEGCLSIPNVYAPVERPLSITVQYTDLD 122 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 GK + GL A CI HE DH+ G LF+D + K+ R++++ L + + Sbjct: 123 GKTCVEDFSGLEARCILHENDHINGVLFIDRI---KKGNERKQLDPLLKQIKK 172 >UniRef50_A6W503 Peptide deformylase n=2 Tax=Actinomycetales RepID=A6W503_KINRD Length = 200 Score = 198 bits (505), Expect = 5e-50, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 10/164 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V + L + PV + ++ ++V DMF +M A +G+GLAA Q+ + R+ V+D Sbjct: 25 VHPITRYFTPVLHRPTTPVTSFDEDLVQLVADMFASMDAADGVGLAANQIGVDARVFVVD 84 Query: 63 VSENRDERL------VLINPELLEKSGE----TGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++ ER ++NP L +G EGCLS+P + A + R +K + Sbjct: 85 CPDDDTERTGENVVAHVVNPVLELPTGRRRRLDLDGEGCLSVPGEYADLARPDKATVTGK 144 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 D G P ++ GLLA C+QHE DHL G +++D L ++ I Sbjct: 145 DVHGNPVKIVGTGLLARCLQHESDHLDGVVYVDRLPAEQRAEIL 188 >UniRef50_D1B5G7 Peptide deformylase n=3 Tax=Synergistaceae RepID=D1B5G7_THEAS Length = 168 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 62/159 (38%), Positives = 99/159 (62%), Gaps = 3/159 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 VL+V PD LR+ + V + E+ ++ DM+ TMYA++G+GLAA QV I + + VID Sbjct: 8 VLKVRVFPDPVLRQPVEEVRDFGEELSDLLADMWATMYAKDGVGLAAPQVGISKSLAVID 67 Query: 63 VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + +R V++NP++L + GE EEGCLS P V R ++++R D G E+E Sbjct: 68 ---HHGDRYVVVNPQILSQDGEEEGEEGCLSFPGIFVNVKRPSRIRLRFQDETGAVKEME 124 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G +A HE+DHL G+L +D++SP+++Q I+ ++ K Sbjct: 125 LQGFIARVFLHEIDHLRGRLLIDHVSPIRRQMIKTRLAK 163 >UniRef50_Q3SKP4 Peptide deformylase n=6 Tax=Betaproteobacteria RepID=Q3SKP4_THIDA Length = 177 Score = 198 bits (504), Expect = 8e-50, Method: Composition-based stats. Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 9/160 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V +VL + D RL A+ VE AE+ ++V DM +TM A G GLAA Q+ + +++ Sbjct: 1 MAVREVLKMGDPRLLAPARAVERFATAELAQLVADMHDTMRALNGAGLAAPQIGVSLQVV 60 Query: 60 VIDVSENRDER-------LVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRA 111 + +V+ N VL+NP + S EGCLS+P R LVPR ++ R Sbjct: 61 IFEVNANPRYPDAAEVPLTVLVNPVVTPLSDATEEGWEGCLSVPGMRGLVPRHGEIHYRG 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 D G+ E G A +QHE+DHL G L+ + L+ Sbjct: 121 FDAAGRALERRVSGFHARVVQHEVDHLNGILYPMRIPDLR 160 >UniRef50_P94462 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF1_BACSU Length = 160 Score = 198 bits (504), Expect = 8e-50, Method: Composition-based stats. Identities = 69/149 (46%), Positives = 99/149 (66%), Gaps = 1/149 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V+ P E L A+ V + ++++++DDM++TM +G+GLAA Q+ I +R V Sbjct: 1 MAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ ++R R+ L+NPE+LEKSGE EGCLS P V RA+ VK+RA +R GKPF Sbjct: 61 VEIGDDRG-RIDLVNPEILEKSGEQTGIEGCLSFPNVYGDVTRADYVKVRAFNRQGKPFI 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSP 149 LEA G LA +QHEMDHL G LF +S Sbjct: 120 LEARGFLARAVQHEMDHLDGVLFTSKISK 148 >UniRef50_A1SJX1 Peptide deformylase n=1 Tax=Nocardioides sp. JS614 RepID=A1SJX1_NOCSJ Length = 199 Score = 197 bits (503), Expect = 9e-50, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + + + + +PV + E++ + DM TMYA +G+GLAA Q+ + + V Sbjct: 22 TARSITRWGTPVMHRAQQPVTTYDDELRALAADMVATMYAADGVGLAACQIGVDLAMFVF 81 Query: 62 DVSENRDERLV--LINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D ++ V + NP+L G EEGCLS P R ++ + D Sbjct: 82 DCPDDSGVHTVGVVCNPQLTLPEGRDRQLDESEEGCLSFPGAHVECARPDQASVTGTGLD 141 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ 157 G+P DGLLA C+QHE DH G +F D LS ++R+++ Sbjct: 142 GEPVSFSGDGLLARCLQHETDHTRGTVFGDRLSTKLRKRLQK 183 >UniRef50_D2N0L8 Peptide deformylase n=1 Tax=Campylobacter jejuni subsp. jejuni 414 RepID=D2N0L8_CAMJE Length = 676 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ P+ +L ++ V + +AE+ ++DDM+ETM A G+GLAA QVD+ R+++++ Sbjct: 2 VRKIITYPNPKLFLSSETVNKFDAELHNLLDDMYETMIASNGVGLAAIQVDVPLRVLLVN 61 Query: 63 VSENRDER-----LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 + DE+ L +INPE++ E EGCLS+P+ V R V ++ DR G Sbjct: 62 IFNENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHVLLKYQDRFG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 + ELEA G LA+ IQHE DHL G LF++ +S K+ Sbjct: 122 EFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKR 157 >UniRef50_D0WE84 Peptide deformylase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WE84_9ACTN Length = 187 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 4/144 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+VL PD LR+V + + + ++++ M +TMYA+ G GLAA QV + +R+IVID Sbjct: 11 LEVLAYPDPTLRQVCEDCDPADKSLRKLARRMAKTMYADNGCGLAAPQVGVLKRLIVIDC 70 Query: 64 SENRD--ERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ + L+NP ++E G E EEGCLS+P + R +R D +G+ + Sbjct: 71 DQDSGAKNPITLLNPTVIETRGPEVVEEEGCLSVPGITVPIRRPAYAIVRYTDLNGEDWI 130 Query: 121 LEADGLLAICIQHEMDHLVGK-LF 143 +E DGLLA C+QHE+DHL G LF Sbjct: 131 IEGDGLLARCLQHEIDHLNGITLF 154 >UniRef50_A3EQQ7 Peptide deformylase n=2 Tax=Leptospirillum sp. Group II RepID=A3EQQ7_9BACT Length = 177 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 4/173 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M +L D RL + V ++ E+ V MFE +Y GIG+AA QV + R V Sbjct: 1 MKPAGILSYGDPRLLIKSTEVTRIDQEMSDFVRGMFELLYRVPGIGIAAPQVGCNMRFFV 60 Query: 61 IDVSENRDE----RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 D++ D + +INP + K G EEGCLS P V RA +++I+ +D +G Sbjct: 61 FDMNRRADPGSRTPVTMINPVISAKEGAITQEEGCLSFPGIFVPVERALRIEIKGVDMEG 120 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 K LE +GL A IQHEMDHL G L ++++ + R+++++ ++++ + Sbjct: 121 KDLVLEGEGLFARLIQHEMDHLEGVLLSEHMTRWDKLRLQKEMRAIEKIGRKG 173 >UniRef50_C7NDD2 Peptide deformylase n=4 Tax=Fusobacteriaceae RepID=C7NDD2_LEPBD Length = 172 Score = 196 bits (500), Expect = 2e-49, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 4/167 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ LR+ ++ V+ V+ ++ +D+M M G+GLAA QVDI +R V+ Sbjct: 1 MKIVLYGHPTLRQKSEKVDVVDDNVRETLDEMVALMRKANGVGLAANQVDIAKRFFVL-- 58 Query: 64 SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 E+ +INPE+LE S E +EEGCLSIP V R K+K++ L+ +GK E Sbjct: 59 -EHDGVVKKVINPEILEFSDEIVDMEEGCLSIPGVFKKVNRPAKIKVKYLNENGKEVVEE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + + + QHE DH+ G LF D LS + ++ + +K++ L R + Sbjct: 118 LEEMWSRAFQHEFDHIEGILFTDKLSVMNKRLVAKKLDVLKRDFTKG 164 >UniRef50_C1ZAV5 Peptide deformylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAV5_PLALI Length = 199 Score = 196 bits (500), Expect = 2e-49, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 8/171 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L+++ LR + PV E+N+E+++ + +MFE MYA +GIGLA+ QV I ++ + Sbjct: 4 MA-LEIVKYGHPALRHKSTPVTEINSELRKAIAEMFELMYAAKGIGLASNQVAIPRQFFI 62 Query: 61 IDVSEN---RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ++++ + +DE +V INP +L + EEGCLS P V RA +V I A D DG Sbjct: 63 LNLTGDAAEKDEEVVFINPVILNRKSSCEGEEGCLSFPGLYGPVKRAGEVLIEAFDLDGN 122 Query: 118 PFELEA----DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 FE+ D L +QHE DHL G LF+D ++ ++ + ++++ ++ Sbjct: 123 CFEMTLSAKEDDLAVRAVQHESDHLDGMLFIDRMTDRARKERQVEIDQFEQ 173 >UniRef50_Q9XAQ2 Peptide deformylase 3 n=23 Tax=Actinomycetales RepID=DEF3_STRCO Length = 208 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +V +V + +E L + + V E ++ ++DDMF TMY EG GLAA QV + R+ V Sbjct: 25 AVRRVTEVGEEVLHRPCRDVTEFGPDLAALIDDMFRTMYVAEGAGLAANQVGVDLRLFVY 84 Query: 62 DVSENRDERLV--LINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D ++ R V L+NP L EGCLS+P VPR ++ +R LD+D Sbjct: 85 DCPDDEGVRHVGHLVNPVLDALDPAARRLLDEGEGCLSVPGAVMAVPRPDRAVVRGLDKD 144 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 G P +E G A C+ HE DH+ G +++D LS +++ ++ Sbjct: 145 GVPLLVEGTGYFARCLAHETDHVNGHVYLDRLSGRERKAALRQ 187 >UniRef50_Q8YVH1 Peptide deformylase 2 n=25 Tax=Bacteria RepID=DEF2_ANASP Length = 179 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 9/154 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L ++ + + LR+ A VE + +A IQ+++DD+ T+ G+G+A+ QV R+ ++ Sbjct: 5 LLPIIQLGNPTLRQKAAWVENIHDATIQQLIDDLIATVAKANGVGIASPQVAQSYRLFIV 64 Query: 62 DVSEN-------RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALD 113 N E +INP+++ S E EGCLS+P R LVPR + +++ D Sbjct: 65 ASRPNPRYPHAPEMEPTAMINPKIVGHSTEIVEGWEGCLSVPGIRGLVPRHQAIEVEYTD 124 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 R G + +A QHE DHL G LF+D + Sbjct: 125 RYGNLQKQTLTDFVARIFQHEFDHLDGVLFIDRV 158 >UniRef50_D1CBE7 Peptide deformylase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBE7_THET1 Length = 203 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 107/184 (58%), Gaps = 19/184 (10%) Query: 1 MSVLQVLHIPDE----RLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V ++L + + LRK + PV + ++E++++V+DM ETM +G+GL+A QV + Sbjct: 1 MAVRRILQMENPDDLSVLRKRSSPVTKFDSELRKLVEDMIETMREADGVGLSAVQVGDLR 60 Query: 57 RIIVIDVSENRDE-------------RLVLINPELLEKS-GETGIEEGCLSIPEQRALVP 102 R++V+++ ++ V+INPE+ + S ++EGCLS+P + A VP Sbjct: 61 RVVVMEMPGKYEQDEDGNQIEVSPPKLYVMINPEITKVSHDRIPMQEGCLSLPGRYAEVP 120 Query: 103 RAEKVKIRALDRDGKPFELEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 RA V++R D +GK +L A+ LL+ CIQHE+DHL G LF + + R ++ +K Sbjct: 121 RAPWVEVRYKDLNGKEHKLLAEEQLLSQCIQHEVDHLDGILFTERIVDWSTFRDERQKQK 180 Query: 162 LDRL 165 R Sbjct: 181 KSRF 184 >UniRef50_B3CFT5 Peptide deformylase n=2 Tax=Bacteroides RepID=B3CFT5_9BACE Length = 186 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 18/184 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + + + LRK + +E+ IQ +++ M++T+ +G GLAA Q+++ ++ +++ Sbjct: 2 IKPITVYGNSVLRKECEDIEQNYPNIQEVIETMWQTLRDADGCGLAAPQINLPIKLFIVN 61 Query: 63 -----------------VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRA 104 V E+ IN +++ S + EGCLSIP+ V R Sbjct: 62 SKDTYTYMSAKEREHFFVEEDCGIEETFINAKIIAYSEKVWTAGEGCLSIPDLYEEVTRP 121 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 V IR D + K G A IQHE +H GKL++D LSPL++Q I+ K+ ++ + Sbjct: 122 WSVTIRYQDNEFKEQNRTYYGYTARIIQHEFEHTQGKLYIDRLSPLRKQLIKNKLMRIIK 181 Query: 165 LKAR 168 + Sbjct: 182 GNRK 185 >UniRef50_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38FB Length = 184 Score = 195 bits (498), Expect = 3e-49, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 4/163 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ P LR AKPV ++A++Q+ M E MY EG+GLAA QV + ++IV++ Sbjct: 1 MKIVRYPHPALRAKAKPVIAIDADVQKAAAQMVELMYRSEGLGLAAPQVTLDYQMIVLNP 60 Query: 64 ---SENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ D+ +V INP ++E G EGCLS P V R + V ++ + G+ Sbjct: 61 LGEADQPDQEVVAINPVIVEAKGSTINDREGCLSFPGLYQNVRRYKTVTVKFYNLKGELV 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 + A L A QHE+DHL G LF+D + L R ++ +EK Sbjct: 121 QTTAHDLAARVWQHEIDHLQGTLFIDKMGSLGLSRSQKDLEKF 163 >UniRef50_B0SHH1 Peptide deformylase n=6 Tax=Leptospira RepID=DEF_LEPBA Length = 179 Score = 195 bits (498), Expect = 4e-49, Method: Composition-based stats. Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 12/163 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M+V ++L I + LR+ ++ V E + ++++ DMFETM +G+GLAA Q+ + ++ Sbjct: 1 MAVRKILKIGNPILRQTSEDVSESEIQTKDFKKLIRDMFETMRHADGVGLAAPQIGVLKK 60 Query: 58 IIVIDVSENRDER--------LVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVK 108 ++V+ ++ + +++NPE+ S G EGCLS+P R V R K++ Sbjct: 61 LVVVGQEDDNERYPGTPEVPNQIILNPEITPLSPPRDGFWEGCLSVPGMRGYVERPNKIR 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 ++ D + + +G AI +QHE DHL G L++D L K Sbjct: 121 MKWRDENYVEHDEIIEGYRAIVLQHECDHLFGVLYVDRLKSTK 163 >UniRef50_A0LDD7 Peptide deformylase n=5 Tax=Proteobacteria RepID=A0LDD7_MAGSM Length = 177 Score = 195 bits (498), Expect = 4e-49, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 10/177 (5%) Query: 1 MSVLQVLHIPDERLRKVAK--PVEEV-NAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQ 56 M++L VL PD+RL + + EE A Q V+D+ ET G +GLAA QVD Sbjct: 1 MAILDVLVYPDQRLLQPCRSLEAEEFKTAAFQAFVEDLIETTQHAPGCVGLAAPQVDHAI 60 Query: 57 RIIVIDV------SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 R++V++ + L+L NPE++ G EGC+S+P+ V RA + ++ Sbjct: 61 RMVVVNCGLARKPPDEHHGELILCNPEIISWEGMETAREGCMSVPDYTGNVMRATHISVQ 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 DR G+ G A +QHEMDHL GKLF D + K +KV + R +A Sbjct: 121 FQDRHGQEQVRHFKGFEARVVQHEMDHLEGKLFTDRVVSRKADLFPRKVYQKKRNRA 177 >UniRef50_Q9FV53 Peptide deformylase 1A, chloroplastic n=13 Tax=Viridiplantae RepID=DEF1A_ARATH Length = 259 Score = 195 bits (497), Expect = 5e-49, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 24/179 (13%) Query: 5 QVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +++ D L + A+ V+ + IQ+I+DDM + M G+GLAA Q+ + RIIV+ Sbjct: 72 EIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVL 131 Query: 62 DVSENRDER----------------LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRA 104 + ++ +V++NP L E+S + EGCLS+ RA V R Sbjct: 132 EDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERY 191 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 +V + DR GK E+ A G A +QHE DHL G L++D + P R + V+ LD Sbjct: 192 LEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVP----RTFRTVDNLD 246 >UniRef50_B2KD65 Peptide deformylase n=1 Tax=Elusimicrobium minutum Pei191 RepID=DEF_ELUMP Length = 176 Score = 195 bits (497), Expect = 6e-49, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 103/176 (58%), Gaps = 9/176 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVE--EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 M+V +++ ++ LR+ KPV+ + ++ I+ DM +T + +G GL+A Q+ + RI Sbjct: 1 MAVRRIVKYGEDILRQKLKPVDFKTLEPQLDAILQDMHDTCMSFQGAGLSANQIGLTHRI 60 Query: 59 IVIDVSEN-------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRA 111 +I + E + +R V+INP ++ K G EEGCLS+P + RAE + + Sbjct: 61 AMIFIPEKTPKGEAQKFKRYVVINPVIVSKKGCVTDEEGCLSLPGLWVEIERAESIVVHC 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L+ G P E+ A G LA +QHE+DHL GK+F+D+ P + I+++++KL + + Sbjct: 121 LNEKGLPVEIHAKGFLAKALQHEIDHLDGKIFIDHADPKLKPEIKKELKKLSKNWS 176 >UniRef50_C7H120 Peptide deformylase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H120_9FIRM Length = 154 Score = 195 bits (496), Expect = 7e-49, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 2/152 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ QV DE LRK A+PV EV I+ ++ DM ETM+ E G+G+AA QV I +R+ + Sbjct: 1 MALRQVRKKGDELLRKKARPVGEVTDRIKLLLQDMEETMHKEGGVGIAAPQVGILKRMFI 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ + +I+PE+++ SGE EEGCLS+P V R EK++++ DGK Sbjct: 61 ME--PVQGSPEYVIDPEIIKASGEQECEEGCLSVPGVVGTVIRPEKIEVKYTGLDGKERR 118 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 AI HE DHL G LF+D S +++ Sbjct: 119 RLLTEFEAIVFSHEFDHLEGVLFIDKASNIRK 150 >UniRef50_A7G6C0 Peptide deformylase n=14 Tax=Clostridium RepID=A7G6C0_CLOBH Length = 178 Score = 194 bits (495), Expect = 8e-49, Method: Composition-based stats. Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 1/152 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++L + D+ L++V+K VE ++ EI I+ D+ +T+YA GIGLAA Q+ +RI + Sbjct: 23 MAIREILQVGDKTLKRVSKKVECIDDEITGIIKDLKDTLYAGTGIGLAAPQIGYLKRIFI 82 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+ + E ++LINP+ +K G+ EEGCLS P +V R +V I L+ G+ Sbjct: 83 IDLRNGQ-EPIILINPKFSKKIGKEESEEGCLSYPGYEGIVIRPRRVAITGLNEKGEEVT 141 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 EA GLL HE DHL G +++D + + Sbjct: 142 YEATGLLKNAFCHEYDHLDGIVYIDKAKKVYK 173 >UniRef50_C8W757 Peptide deformylase n=2 Tax=Atopobium RepID=C8W757_ATOPD Length = 180 Score = 194 bits (495), Expect = 8e-49, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 4/168 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV- 63 ++ PD RL + + ++++N +++++ + M + MYA +G+GLA Q+ +R++VIDV Sbjct: 7 DMVLWPDPRLSQKCEEIDDINDDVRKMAEHMLKVMYATDGVGLAGPQIGYMKRMVVIDVD 66 Query: 64 -SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 ++ VLINPE+ GE EEGCLS P V R V + A + DG Sbjct: 67 YPNGQENPFVLINPEIKVADGEPRVYEEGCLSFPGITVPVTRPSHVVVHAYNLDGDLMRY 126 Query: 122 EADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 EA+G L A+C+QHE+DH+ G D+L P + ++ ++ AR Sbjct: 127 EAEGDLFAVCLQHEIDHINGVTMPDHLGPGARMETLREYKEALASGAR 174 >UniRef50_B9Z3A2 Peptide deformylase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z3A2_9NEIS Length = 170 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 9/148 (6%) Query: 11 DERLRKVAKPVEEVN-AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE 69 LR+ A V E + + +V DMF+T YA G+GLAA Q+ + R+IV + Sbjct: 10 HPMLRQHAAAVTEFDTPALHELVQDMFDTQYAGNGVGLAAPQIGVPLRVIVFAYGGGERD 69 Query: 70 R-------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 VLINPE+ + EGC S+P QR VPR + ++ RA D G+ E Sbjct: 70 PGAPAIPPTVLINPEIRPDAEHIEEDWEGCFSVPGQRGRVPRWQAIRYRAQDIQGRLVEG 129 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSP 149 A+G A IQHE+DHL G LF+D+L P Sbjct: 130 RAEGFHARIIQHEVDHLNGTLFIDHLPP 157 >UniRef50_B3ETT4 Peptide deformylase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=DEF_AMOA5 Length = 188 Score = 193 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 11/176 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ + LR+ A P+E + +++ +++ MF TM A +G+GLAA Q+ ++ V+D Sbjct: 2 IYPIVPYGESILRQTAAPIE-LGTDLETLIESMFITMNAAKGLGLAAPQIGKSIQLFVVD 60 Query: 63 VSE--------NRDERLVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 VS R V INP E+ + + T EEGCLSIP VPR ++V+I+ Sbjct: 61 VSPFVGDGMVQPDKHRKVYINPVLEIYQPNTITHYEEGCLSIPGIYVDVPRNKRVRIKFF 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DR+ + E + + A +QHE DHL GKL +DYL ++ R++ K+E + + + Sbjct: 121 DRNWQAQEEDLVDMPARVVQHEYDHLYGKLHIDYLRADRRLRLKSKLENIKQGRVE 176 >UniRef50_A3JYF4 Peptide deformylase n=1 Tax=Sagittula stellata E-37 RepID=A3JYF4_9RHOB Length = 165 Score = 193 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 4/166 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L +L PD LR + PV + + R+V+DMFETMYA G GLAA QV + R+ V Sbjct: 1 MSLLPILTWPDTGLRAASMPV-RAPSAVARLVEDMFETMYAAPGRGLAAPQVGVRSRLFV 59 Query: 61 IDVSENRDE--RLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +D + E V INP + G E EE CLS+P +V R ++++R D D K Sbjct: 60 MDATWKDGEKTPTVCINPVVAPLDGPEEPGEEACLSMPGVSVMVTRPTRIRLRYTDLDDK 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E+ G A QHE DHL G + +L ++ + + E L Sbjct: 120 THEVVLTGAAARIAQHETDHLDGVMHFQHLPLAERGVLLAEYEALR 165 >UniRef50_B2S3Z6 Peptide deformylase n=2 Tax=Treponema pallidum RepID=DEF_TREPS Length = 162 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 4/161 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 +++ + + L V++PV EV+ +++ + MF M G+GLAA QV R+ V+DV Sbjct: 1 MELKFLGEPCLTTVSEPVSEVDEQLRAFISGMFRVMRGAGGVGLAAPQVGRTVRVFVVDV 60 Query: 64 SENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 INP++ S E EEGCLSIP V R +V ++ LD +GK ++ Sbjct: 61 ---EHHVRAFINPQITAASEEQSSYEEGCLSIPHIYERVLRPRRVSVQYLDENGKRCAVD 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 ADG+LA IQHE DHL G LF+D + ++ ++ L Sbjct: 118 ADGILARVIQHEYDHLDGILFLDRIDEKRRDDALRRYAALR 158 >UniRef50_A2SPW1 Peptide deformylase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPW1_METLZ Length = 162 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 4/161 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 +++ L +VA+PV+ + E+ I+D+M + G+GLAA QV I +R V++ Sbjct: 1 MEIQIYGKTVLAQVAEPVDTITPELLAILDEMVPMLKEHRGVGLAAPQVGIGKRFFVMNP 60 Query: 64 SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + +INPE+++ + +EEGCLS+P V R ++ +R + G+ E E Sbjct: 61 GDKVRR---VINPEIMKTGNAFSEMEEGCLSVPGIHKKVRRPRRITVRYTNEAGELIEEE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 A HE DHL G LF+D +SP+ ++ I +++E L Sbjct: 118 LKDYPARVFLHEYDHLDGILFVDRISPIAKKMIAKQLEDLR 158 >UniRef50_Q8G487 Peptide deformylase 2 n=33 Tax=Bacteria RepID=DEF2_BIFLO Length = 162 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 3/163 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +PD LR ++E+ ++R+VDD+ ET+ GL+A Q+ + R Sbjct: 1 MAIREIRVVPDPVLRTPCDEIKEITPAVRRLVDDLLETVDDPGRAGLSANQIGVSLRAFS 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ ++NP L EKSGE +EGCLS+P RA+ ++R +D DG Sbjct: 61 YNIDGKVG---YVLNPVLEEKSGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGNEVV 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 LE GL+ +QHE DHL G +++D L +++ + + Sbjct: 118 LEGSGLMGRMLQHECDHLDGHVYLDRLEKEERREALRYMRNRQ 160 >UniRef50_B9ZK41 Peptide deformylase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZK41_9GAMM Length = 178 Score = 192 bits (490), Expect = 3e-48, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 12/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 MSV ++L + LR+V PV E + + +VDD+ +TM+A EG+GLAA Q+ + R Sbjct: 1 MSVRRILRMGHPDLRRVCDPVPESDFDSPGLHALVDDLVDTMHASEGLGLAAAQIGVPHR 60 Query: 58 IIVIDVSEN--------RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVK 108 + VI++ RL L+NP + EGCLS+P R V R + Sbjct: 61 VAVIEIQPGNTRYPGAVPTGRLALVNPVVTVLDPTPQRYWEGCLSVPGLRGEVARPRHIA 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 + + DG P LE +G LA QHE+DHL G LF+D ++ + + + Sbjct: 121 VDYHEPDGTPRHLEPEGFLATVFQHEIDHLDGTLFIDRVTDTTRLAFLDEYREFH 175 >UniRef50_D1BVC6 Peptide deformylase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVC6_XYLCX Length = 227 Score = 192 bits (490), Expect = 3e-48, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 6/172 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 VL++ I + L A+PV E+ E+ R++DDMF TM EG+GLAA QV + R+ V Sbjct: 33 VLRITEIGEPVLHTPARPVTELGTPELARLIDDMFTTMDVAEGVGLAAPQVGVDLRVFVY 92 Query: 62 DVSENRDERLV--LINPELLEK--SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D++++ +R V ++NPEL + +EGCLS+P A + R IR +D+ G Sbjct: 93 DLTDDAGDRHVGAVVNPELELDLDADPEVEDEGCLSVPGAYAPLERPGGATIRGVDQLGG 152 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ-QRIRQKVEKLDRLKAR 168 P +LEA G LA C HE HL G L+ D+L+P +Q +RQ+ EK + A+ Sbjct: 153 PVQLEATGYLARCFIHEAQHLDGTLYWDHLTPEQQADALRQRDEKRAEVLAQ 204 >UniRef50_Q83CV9 Peptide deformylase 1 n=4 Tax=Coxiella burnetii RepID=DEF1_COXBU Length = 170 Score = 192 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 77/172 (44%), Positives = 110/172 (63%), Gaps = 16/172 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAA-------TQVDI- 54 + ++L PD RL+ A+ VE+ + +Q+++D+MFET YA TQ+D+ Sbjct: 1 MFKILQYPDPRLKTAAQRVEKFDDALQKMIDEMFETHYAAT------NCAALAATQLDME 54 Query: 55 -HQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPE-QRALVPRAEKVKIRAL 112 + I VID S N+D+ L L+N E++E+SGE EEGC+S+ V RA K+K+RA Sbjct: 55 NPKHITVIDFSPNKDQPLCLVNAEIIERSGEHTEEEGCMSVGGGTFEKVTRAAKIKVRAR 114 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 DR GKP E EADG +A CIQHE+DHL G +F+D LS LK+ RI +++ KL R Sbjct: 115 DRYGKPVEFEADGFMAKCIQHELDHLNGIIFLDRLSTLKRGRIDKRLGKLRR 166 >UniRef50_Q83GH8 Peptide deformylase n=2 Tax=Tropheryma whipplei RepID=DEF_TROWT Length = 228 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 63/175 (36%), Positives = 85/175 (48%), Gaps = 19/175 (10%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + L AKPV + + IQ IV DMF TM+A G+GLA Q+ + RI V Sbjct: 36 ILPIYITGHAVLHAPAKPVTDF-SGIQEIVRDMFATMFAAPGVGLAGPQIGLGLRIFVYS 94 Query: 63 VSENRD-ERLVLINPELLEKSG-----------------ETGIEEGCLSIPEQRALVPRA 104 +E + V INP+LL G + EGCLS P + + RA Sbjct: 95 YTEGDTLHQGVAINPDLLIPKGVPKRQTNKQQANNSTSCDEPDREGCLSFPGYQFPLERA 154 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 +V + A D + KPF + A G LA QHE DHL G L++D L+ +RQ V Sbjct: 155 PQVTLSAFDENKKPFTVHATGWLARIFQHEFDHLQGTLYVDRLAQKYSGEVRQAV 209 >UniRef50_D1YDB7 Peptide deformylase n=3 Tax=Propionibacterineae RepID=D1YDB7_PROAC Length = 200 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 10/173 (5%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 S+ +V + L +PV E + ++ +V DMF TM A +G+GLAATQV + + V Sbjct: 20 SLRRVTRWGESVLHAQTRPVTEFDEDLTTLVRDMFATMNAADGVGLAATQVGVDLSLFVY 79 Query: 62 DVSENRD--ERLVLINPELLEKSGE----TGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 + + NP + G +EGCLS P + R + D Sbjct: 80 ICPDANNVVHHGAFCNPVVTLPEGHDRHLEAADEGCLSWPGGFQSMARPDLATCTGQDPW 139 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 G + G A C+QHE DH G +F D LS +R R+K+++ A Sbjct: 140 GNDITVTGTGFFARCLQHETDHCNGIVFGDRLS----KRARRKLDEQHDSVAH 188 >UniRef50_P63919 Peptide deformylase-like n=42 Tax=Alphaproteobacteria RepID=DEFL_BRUME Length = 164 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ PD RLR A+PV + ++++ DD+ +TM A GIG+ A + I +R++V Sbjct: 1 MTVRLIVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGISKRVVV 60 Query: 61 IDVSENRDERLVLINPELLEK-SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +++ + + INPE++ + +EG +S+P V R ++++R D DG Sbjct: 61 LEL-DRAAGPKIYINPEIVWACEEKIRHQEGSVSMPGVVDEVERHARIRLRYQDLDGNEQ 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E+DGLLA+C QHE+D L G ++ LS L+++R+ ++ EKL R Sbjct: 120 TEESDGLLAVCHQHEIDQLDGIFWVQRLSRLRRERLIKRYEKLQR 164 >UniRef50_C6X128 Peptide deformylase n=5 Tax=Bacteroidetes RepID=C6X128_FLAB3 Length = 190 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 14/161 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + D LRK + + + ++ ++ +MF+TM + GIGLAA QV + R+ ++D Sbjct: 2 ILPIRAFGDAVLRKHCQEITKDYPDLDELIANMFDTMNSAHGIGLAAPQVGLDIRLFIVD 61 Query: 63 VS-------------ENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 +S E +D + VLIN ++LE++GE EGCLSIP+ R V R E + Sbjct: 62 LSPLAEDEDYADIADELKDFKKVLINAKILEETGEEWKFNEGCLSIPDIREDVKRKETIV 121 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP 149 I D + + A IQHE DH+ G LF D+LS Sbjct: 122 IEYYDENFVKHTDTFSDMRARVIQHEYDHIEGILFTDHLSS 162 >UniRef50_A9AZ24 Peptide deformylase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZ24_HERA2 Length = 211 Score = 191 bits (487), Expect = 8e-48, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 22/191 (11%) Query: 1 MSVLQVLHIPDE----RLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V +VL I D LR AK + + + +VDDM ETM G+G+AA QV + + Sbjct: 1 MAVRRVLQIEDPTDAVVLRAKAKRITSFDQSLAGLVDDMIETMREARGVGIAAPQVGVSR 60 Query: 57 RIIVIDVSENRDER-------------LVLINPELLEKSGETGI-EEGCLSIPEQRALVP 102 R++VI+ +E V++NPE+++ S ET + +EGCLS+P + VP Sbjct: 61 RVVVIEEPAQYEEHEDGTQTQIAPAVLYVMVNPEIIKASEETHMLQEGCLSLPGRYTKVP 120 Query: 103 RAEKVKIRALDRDGKPFELE---ADGL-LAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 R + V I+ D G+ L A+ + QHE+DHL G +F D ++ + +K Sbjct: 121 RNKWVTIKYYDLKGREQRLRHIPAEDYKVGHIAQHELDHLDGIMFTDRMTEESKLVDYRK 180 Query: 159 VEKLDRLKARA 169 + RLK R Sbjct: 181 ESESARLKRRG 191 >UniRef50_D1XJU9 Peptide deformylase n=5 Tax=Streptomyces RepID=D1XJU9_9ACTO Length = 219 Score = 191 bits (486), Expect = 8e-48, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 7/167 (4%) Query: 2 SVLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 SV ++ + +E L + + V + + ++DDMF TMY +G GLAA QVD+ R+ V Sbjct: 36 SVRRITVVGEEVLSRPCQEVTSFGSPGLAALIDDMFVTMYVADGAGLAANQVDVDLRLFV 95 Query: 61 IDVSENRDERLV--LINPELLEKS----GETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 D +++ R V ++NP L + EGCLS+P +PR ++ +R D+ Sbjct: 96 YDCPDDQGVRHVGHIVNPVLDQPDPGSRRLVDDSEGCLSVPGASMTLPRTDRATVRGFDK 155 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 DG P +E G A C+QHE DHLVG ++D LS ++ +++E+ Sbjct: 156 DGNPLVIEGTGYFARCLQHESDHLVGHTYLDRLSKRDRKDALRQMEE 202 >UniRef50_Q253S4 Peptide deformylase n=14 Tax=Chlamydiaceae RepID=DEF_CHLFF Length = 186 Score = 191 bits (486), Expect = 8e-48, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 10/172 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ + LR+ A + E+ I+++V DM+ETM A +G+GLAA QV + V+ Sbjct: 2 IRELEYYGSHILRRKADIIPEITDTIRQLVQDMYETMVAHKGVGLAAPQVGESLSLFVVC 61 Query: 63 VSENR--------DERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V D V INP L S + EGCLSIP RA V R + + + AL+ Sbjct: 62 VEGETEDGDLIFCDFPKVYINPVLSNASEDLVIGREGCLSIPGLRADVYRPQSITVTALN 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL-SPLKQQRIRQKVEKLDR 164 DG+ F +G A I HE DHL G L++D + P ++ + +EK+ R Sbjct: 122 LDGQEFTEHLEGFPARIIMHENDHLHGVLYIDKMEEPKDIKKFKASLEKIRR 173 >UniRef50_Q6MD22 Peptide deformylase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD22_PARUW Length = 176 Score = 191 bits (486), Expect = 9e-48, Method: Composition-based stats. Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 8/173 (4%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + + D LRK + E+N I+++V DM ETM A +G GLAA QV + + + Sbjct: 3 LPLAYYGDSVLRKKGSQIAEINDTIKQLVQDMIETMEANDGCGLAAPQVHQSLSLFITCI 62 Query: 64 SEN-------RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 + + V INP++L S E +E CLSIP R V R KV I+A D + Sbjct: 63 PQYLENDQVIPGQVRVFINPKILSYSQEVWACQEACLSIPGMRETVSRPLKVTIQATDLN 122 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 G F E G A I HE DH+ G L++D L +++ I + + ++ + ++ Sbjct: 123 GHTFTEEFAGFDAHVIMHENDHVNGVLYIDRLPSKRKKGIEKFLREIKKKYSK 175 >UniRef50_A7BDR6 Peptide deformylase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDR6_9ACTO Length = 212 Score = 191 bits (486), Expect = 9e-48, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 35/182 (19%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L + + L +VA PV+ +++E++ +V DM ETM+A G+GLAA QV + ++ V Sbjct: 1 MSILPICITGEPVLHRVADPVDSIDSELRDLVADMIETMHAAPGVGLAAPQVGVGAQVFV 60 Query: 61 ------------------IDVSENRDERLVL----INPE------------LLEKSGETG 86 +D R VL +NP +L + + Sbjct: 61 WRYGGAGSFDAQYREVLQLDEGPARGFNTVLHGVVVNPTLDLVWDTEGAGAILPEEPDIA 120 Query: 87 IE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 +E EGCLS+P + R +R D DG E+ A G LA QHE DHL G L++D Sbjct: 121 LESEGCLSVPGYGYPLRRVLGAVLRGYDVDGNAIEVSARGWLARIFQHEYDHLQGTLYVD 180 Query: 146 YL 147 L Sbjct: 181 RL 182 >UniRef50_A5FVG7 Peptide deformylase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVG7_ACICJ Length = 209 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 69/180 (38%), Positives = 95/180 (52%), Gaps = 11/180 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPV-EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M++L++ + L A+PV + EI R++ DM ET+ G+GLAA QV + R+ Sbjct: 26 MALLKLARLGHPVLFAKAEPVADPAAPEIARLLHDMAETLADAGGVGLAAPQVHVPLRLF 85 Query: 60 VIDVSENR------DERL---VLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKI 109 + V E+R D +INPEL+ GE EGCLSIP ALVPRA ++ + Sbjct: 86 IYRVPESRAGGGEHDGPRGLSAVINPELVLHPGEPVEDWEGCLSIPGMSALVPRAARLTL 145 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 RA+D G PF EA G A IQHE DHL G L+ L + ++V + ARA Sbjct: 146 RAIDATGAPFSREAAGFHARVIQHEADHLDGILYPQRLRDPRLMGFNEEVARFRDEIARA 205 >UniRef50_A7GFN2 Peptide deformylase n=12 Tax=Clostridiales RepID=A7GFN2_CLOBL Length = 150 Score = 190 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 4/146 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYA-EEGIGLAATQVDIHQRII 59 M++ Q+ + DE LRK +K VE V+ +I++I++DM +TMY E G GLAA QV I +R++ Sbjct: 1 MALRQIRLVDDEILRKESKVVEIVDDKIRQILNDMADTMYNTENGGGLAAPQVGILKRLV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID+ + + L+NP+++++ G + EGCLSIP + + R KV ++AL+ +G+ Sbjct: 61 VIDMGQG---LIKLVNPKIIKQEGTQEVIEGCLSIPNKFGKLIRPAKVTVQALNENGEEI 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 L G LA C HE+DHL G LF D Sbjct: 118 ILTGTGDLAKCFCHEIDHLEGILFTD 143 >UniRef50_A0PNK2 Peptide deformylase n=50 Tax=Actinomycetales RepID=DEF_MYCUA Length = 197 Score = 190 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVE-----EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIH 55 M+V+ + + D L PV + A++ ++ M+ETM A G+GLAA Q+ Sbjct: 1 MAVVPIRIVGDPVLHTPTSPVPVGADGSLPADLPELIATMYETMDAAHGVGLAANQIGYG 60 Query: 56 QRIIVIDVSENR----DERLVLINPELLEKS------GETGIEEGCLSIPEQRALVPRAE 105 R+ V D +++R R V+INP L +EGCLS+P + RA Sbjct: 61 LRLFVYDCADDRRKAAHRRGVVINPVLETSEIPENMPDPDNDDEGCLSVPGESFPTGRAT 120 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 ++ LD +G P ELE GL A +QHE HL G L++D L + ++ V+ Sbjct: 121 WARVTGLDAEGNPVELEGSGLFARMLQHETGHLDGYLYLDCLIGRHARSAKRAVK 175 >UniRef50_A8Z5V9 Peptide deformylase n=3 Tax=Candidatus Sulcia muelleri RepID=DEF_SULMW Length = 189 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 98/175 (56%), Gaps = 12/175 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L ++ + LRK +++ +I ++++M++TMY +GIGL+A Q+ + R+ +I+ Sbjct: 2 ILPIIIYGNSFLRKKCIEIDKSYKDINFLINNMYDTMYQAKGIGLSAPQIGLSIRLFIIE 61 Query: 63 VSE--NRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + + + V INP +++K G +EGCLSIP + R + I D + K + Sbjct: 62 YNNFLKQKFKKVFINPIIIKKYGYNLISKEGCLSIPNIIENIKRKNNIIIEYYDENWKKY 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ---------KVEKLDRL 165 + +GLL+I IQHE DH+ GKLF+D + LK I++ K+ KL +L Sbjct: 122 KQHFNGLLSIIIQHEYDHIEGKLFIDNIFILKNILIKKNFNLNYNLYKLYKLSKL 176 >UniRef50_B5J0U4 Peptide deformylase n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J0U4_9RHOB Length = 164 Score = 189 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 3/158 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + P L + P + ++ +++D+F+TMY +G LAA Q+ + +R+ V Sbjct: 1 MVTRDIRLWPHAVLTQTCAPASLNDPDLDGLIEDLFDTMYHAKGRVLAAPQIGVTKRVFV 60 Query: 61 IDVSENRD--ERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +DV+ + INP++ E +G+T +E CLSIP+ V R E V++R +RDG Sbjct: 61 VDVTWKDGIRDPRAFINPQITETAGDTVFMDEQCLSIPDTPMPVARPEAVQLRWANRDGG 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 DG+LA CIQHE+DHL G + D+ SP + + Sbjct: 121 LETAPFDGILARCIQHELDHLNGTVIFDHQSPEVRAEL 158 >UniRef50_C8WHT7 Peptide deformylase n=3 Tax=Coriobacteriaceae RepID=C8WHT7_EGGLE Length = 183 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 3/162 (1%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +V+ ++ P+ L +V P + + ++++ M + MY +G GLAA Q+ + +R++VI Sbjct: 3 TVISIVQSPNPILNQVCDPCDLGDKSLKKLAKQMAKAMYKNDGCGLAAPQLGVAKRLVVI 62 Query: 62 DVSENRDE--RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D + E +VL+NP L++ G+ EGCLS P + R ++R D DG+ Sbjct: 63 DCDQEEGEQNPIVLVNPVLVDTQGDPVVAGEGCLSCPGITVPIARPPFARVRYFDLDGEE 122 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 +E+E D LL C+QHE+DHL G + P+ + + E Sbjct: 123 WEIEGDDLLGRCLQHELDHLDGITMFERCDPMARIEALRDYE 164 >UniRef50_A4WNU7 Peptide deformylase n=25 Tax=Rhodobacterales RepID=A4WNU7_RHOS5 Length = 167 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 97/163 (59%), Gaps = 1/163 (0%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + + PD+RL+ A PV+ V EI I DDM ETM A G GLA Q+ + R+ V+D Sbjct: 2 IRPFVMYPDKRLKTAAAPVDAVTDEIHAIWDDMVETMDAMPGYGLAGPQIGVMLRLAVVD 61 Query: 63 VSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 S++R + + L NPE+L SG+ EEG ++P A++ R V +R L+ G+ E Sbjct: 62 CSDSRGKAIRLANPEILHASGQFREHEEGSPNLPGATAVISRPRAVTVRFLNTAGEMEER 121 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + + A +QH++DHL GKL++D+LS LK++ + K EK R Sbjct: 122 DFVDIWATSVQHQIDHLNGKLYIDHLSALKRKMVIAKSEKYLR 164 >UniRef50_B2V9A0 Peptide deformylase n=4 Tax=Hydrogenothermaceae RepID=B2V9A0_SULSY Length = 169 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M L++L PDERL++ + V + E + ++ + TMY G +G+AA QV+ R I Sbjct: 1 MEKLEILKYPDERLKRKSIEVVDFGKEFKEFIEKLTYTMYNSPGGVGIAAPQVNNPIRTI 60 Query: 60 VIDVSENRDER-------LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++D S++ + +VL NP+++ GE EGC+S+P+ V R +K+ A Sbjct: 61 IVDTSKSTHKTNKVSHGLMVLSNPKIVHAEGEIIFREGCMSVPDYTGNVKRFYYIKVEAQ 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D +G + +G A+ IQHE+DHL GK+F++ + K R+KV K Sbjct: 121 DINGNLITFDTEGFEAVVIQHEIDHLEGKVFIEKVVSPK-DIFRRKVYK 168 >UniRef50_C7PQZ8 Peptide deformylase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQZ8_CHIPD Length = 191 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 17/183 (9%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID- 62 + ++ LRK PV++ + +++++M+ T+ G GLA Q+++ RI +ID Sbjct: 1 MPIVPYGSPILRKQCSPVDKNYDGLDKLIENMWHTLENANGSGLATPQINLPIRIFIIDS 60 Query: 63 ---------------VSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEK 106 + R V INPE+ E S + EGCLSIP A+V R Sbjct: 61 ETSFNTMNPEERKVHFEGDNGIREVFINPEITEYSEAKCDDLEGCLSIPGVAAIVSRPYA 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 VKI DR+ + +GL A IQHE DH+ G+L++DYLS LK + + +K+ ++ + + Sbjct: 121 VKIEYYDRNFQKHTKAFNGLTARIIQHEFDHIEGRLYLDYLSSLKMKLLTKKLAQIKKGR 180 Query: 167 ARA 169 Sbjct: 181 YAC 183 >UniRef50_D1N2T1 Peptide deformylase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2T1_9BACT Length = 197 Score = 188 bits (480), Expect = 4e-47, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 15/178 (8%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 V D L+ A+PVE V EI+ + +M E + G+G+AA QV R++V D+ Sbjct: 11 VHTAGDPVLKAKARPVEAVTPEIRELACNMQEALRVFSGVGIAAPQVGESLRLVVFDIPV 70 Query: 66 NRDE--------------RLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIR 110 + L +INPE++ S +EGCLS+P+ A V R V R Sbjct: 71 DSMGENPTVGEQLLLPRMPLTVINPEIVASSDVLCESDEGCLSVPDIWAPVVRPATVVFR 130 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A DG+ E E GLL CIQHE+DHL G LF+D +SP + I + +++L R + Sbjct: 131 ATTLDGEVIECECGGLLGRCIQHELDHLDGVLFVDRVSPEAARTIERDLKQLIRYGEK 188 >UniRef50_Q0SDG2 Peptide deformylase n=2 Tax=Actinomycetales RepID=Q0SDG2_RHOSR Length = 188 Score = 188 bits (479), Expect = 6e-47, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L D RL A V ++E+ VDD+ ET A G GLAA QV + I V Sbjct: 1 MAIRPILIAGDTRLTTPAVTVTAFDSELAAFVDDLHETNTAAHGAGLAANQVGDPRAIFV 60 Query: 61 IDV-SENRDERLVLINPELLEKSGETGIE-----EGCLSIPEQRALVPRAEKVKIRALDR 114 D+ + R R +INP L + EGCLS+P +R RA+ ++ +D Sbjct: 61 YDLIDDARRHRGHVINPVLETSPRPETMPDPDDLEGCLSVPGERYPTGRADWARVVGVDV 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 D KP +E G LA C+QHE DHL G L++D L + R+ +++ Sbjct: 121 DNKPISVEGTGYLARCLQHETDHLAGHLYLDRLIGRNHRAARKMIKQRQ 169 >UniRef50_B5Y7H9 Peptide deformylase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7H9_COPPD Length = 171 Score = 188 bits (478), Expect = 7e-47, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 6/156 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE--GIGLAATQVDIHQRIIVI 61 + + IPD+ LR A+ V+ E +RIV+DMF M E G+GLAA QV I +R +VI Sbjct: 1 MDIRVIPDKMLRAKAQKVKSFTEEDRRIVEDMFRLMKENEVEGVGLAAPQVGISKRFVVI 60 Query: 62 DVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 D+ E + VLINP E + EGCLS+P V R +K+K+ + G+ Sbjct: 61 DLDEFHE---VLINPRWEPLGKEKEEDIEGCLSVPGVYGPVERFKKIKVSFTNLYGEKIT 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 L+ DG+L+ +QHE+DHL G LF+D ++ + + Sbjct: 118 LKLDGMLSRVVQHEVDHLDGVLFIDKITDWDRIEVM 153 >UniRef50_Q92HU7 Peptide deformylase-like n=10 Tax=cellular organisms RepID=DEFL_RICCN Length = 183 Score = 187 bits (477), Expect = 9e-47, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 2/164 (1%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 Q+++ P++ +K A+ ++ V+ I+ IVD M + ++ E +GL A V I +RI V+D+ Sbjct: 9 QIVYAPNDIFKKQAEYIDIVDDNIRTIVDKMLQNLHIERAVGLGANMVGILKRIAVVDLH 68 Query: 65 EN-RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 EN + +V INP + S E EG LS P A + R++ +K++ LD +G EL Sbjct: 69 ENNKSSPIVFINPNITYFSEEKQTFIEGSLSFPGIEASITRSKAIKVKYLDYNGNKQELA 128 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 A+G LA IQHE+++L GK F+D LS LK+ + +K+ K +L Sbjct: 129 AEGFLATVIQHEIEYLNGKTFLDSLSKLKRDTLLKKMLKHIKLH 172 >UniRef50_A9WHG7 Peptide deformylase n=5 Tax=Chloroflexaceae RepID=DEF_CHLAA Length = 188 Score = 187 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 19/173 (10%) Query: 1 MSVLQVLHIPD----ERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M++ ++L I D + L+ +PV+ + ++++V DMFETM A G+GLAA Q+ I Sbjct: 1 MAIRRILRIDDAEDRKILKMQCRPVKLPDRNLKQLVADMFETMRAAHGVGLAAPQIGIPI 60 Query: 57 RIIVIDVSENRD-------------ERLVLINPELLEKSGETGI-EEGCLSIPEQRALVP 102 ++ +I++ + E VLINP +++ SGE + +EGCLS+P +VP Sbjct: 61 QLCIIEIPAEYEERADGSVVEVAPAEPYVLINPRIVKMSGEEVMRDEGCLSLPGWYGMVP 120 Query: 103 RAEKVKIRALDRDGKPFEL-EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 R V + D +GK L A LL IQHE+DHL G LF + + L R Sbjct: 121 RQTWVTVEFQDLNGKHHRLRRAGDLLGWAIQHEVDHLNGILFTERIRDLSTLR 173 >UniRef50_Q7V8G6 Peptide deformylase 1 n=78 Tax=Bacteria RepID=DEF1_PROMM Length = 192 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 10/170 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V ++L + + +LRKV+ V++ + E I ++ D+ +T+ A +G GLAA Q+ + R++ Sbjct: 1 MAVKEILRMGNPQLRKVSNVVDDASDELIISLIKDLQDTVKAHQGAGLAAPQIGVPLRVV 60 Query: 60 VIDVSENRDER--------LVLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 + +LINP L S EGCLS+P R V R ++ R Sbjct: 61 LFGGGGPNPRYPEAPSIPQTLLINPVLTPIGSDLEDGWEGCLSVPGLRGKVSRWSRIHYR 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 AL+ DG E +G A IQHE DHL G LF D L ++E Sbjct: 121 ALNEDGFEVEHCLEGFPARVIQHECDHLDGVLFPDRLVDSASFGFTGELE 170 >UniRef50_A9DWU1 Peptide deformylase n=2 Tax=Rhodobacteraceae RepID=A9DWU1_9RHOB Length = 165 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 7/157 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ +VL PD RL ++ P+EE+ EI+++ DM ETMYA G GLA QV R+ V Sbjct: 1 MSMREVLRWPDPRLAEICAPIEEITPEIEQLAADMLETMYAAPGRGLAGPQVGAMLRLFV 60 Query: 61 IDVS--ENRDERLVLINP---ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 +D EN+ + LV INP E+ EGCLSIP + R +V++ + Sbjct: 61 MDAGWKENKSDPLVCINPMFQEI--GEERVTNTEGCLSIPGISTDISRPSQVQMVWTGLN 118 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 G + +G A+ QHEMDHL G + D+L + Sbjct: 119 GGRYVQSFEGAAALIAQHEMDHLDGVVTFDHLDAETR 155 >UniRef50_C0VXF2 Peptide deformylase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXF2_9CORY Length = 180 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 15/168 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 ++ ++ D L +PVE +++DDMFETMYA G+GLAA QV + Q V D Sbjct: 2 IMPIVICGDPVLHTPTQPVE--TPLSPKLIDDMFETMYAANGVGLAANQVGLSQSFFVFD 59 Query: 63 VSENRDERLVLINPELLEKS------GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 + V++NP L E EGCLS+P + RA K+ D +G Sbjct: 60 C---EGVKGVVVNPVLETSEVPETMPDEEEDLEGCLSLPGEFFPTGRASWAKVTGTDENG 116 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 P E E + LA C QHE HL G+++ D + R R++ ++ R Sbjct: 117 NPVEFEGEDFLARCFQHECGHLKGQVYTD----VTIGRYRREAKRAIR 160 >UniRef50_C6MYK8 Peptide deformylase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYK8_9GAMM Length = 179 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 14/175 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQ------RIVDDMFETMYAEEGIGLAATQVDI 54 M++ V+ + +++L ++PV + + I+ ++ +M +TM A+ G+G+AA Q+ Sbjct: 1 MTIQTVVKMGNKQLGIPSEPVVDFDPAIRSYPELTELIQNMKDTMDAKGGVGIAAPQIGY 60 Query: 55 HQRIIVIDVSENRDER-------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEK 106 ++R+I+ +N+ +LINP S E EGCLS+P R LVPR +K Sbjct: 61 NKRVIMFGFEKNKRYPNEKPVPFTILINPIYQIMSDELVEEWEGCLSVPGLRGLVPRYKK 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 ++ D +GK A A IQHE DHL G LF L ++ +++E Sbjct: 121 IEYSGYDPEGKLITRVAADFHARIIQHECDHLDGVLFPYRLKDIRFFGYEEELED 175 >UniRef50_Q7NJV3 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF1_GLOVI Length = 227 Score = 186 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 88/187 (47%), Gaps = 24/187 (12%) Query: 3 VLQVLHIPDERLRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 V +++ D LR AKP+ E + IQ+++ M E M G+GLAA QV + +++ Sbjct: 45 VYEIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLV 104 Query: 60 VIDVSENRDERL----------------VLINPEL-LEKSGETGIEEGCLSIPEQRALVP 102 VI+ ERL VLINP L +E EGCLSIP + LV Sbjct: 105 VIEDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVA 164 Query: 103 RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 RA V++ ALD P + A G A +QHE+DHL G L +D + + +E Sbjct: 165 RARVVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMD----LQTFSTLENY 220 Query: 163 DRLKARA 169 DR Sbjct: 221 DRFWRGG 227 >UniRef50_C1XRQ6 Peptide deformylase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRQ6_9DEIN Length = 195 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 18/184 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI- 61 + + D LRK A V++ +EI R+ ++MFETM+ G+GLAA QV +R+ V Sbjct: 2 IYPIRLYGDPVLRKRASSVKDF-SEIPRLAENMFETMFEARGVGLAAPQVGRSERLFVFA 60 Query: 62 --------------DVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQR-ALVPRAEK 106 D+ + V++NP + ++G+ EGCLSIP VPR + Sbjct: 61 EYVDAEDEEEGEEADLKTRVKNQWVMVNPAITYRAGQQISTEGCLSIPGLYSDEVPRDLQ 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP-LKQQRIRQKVEKLDRL 165 +++ + G+ E +G LA+ +QHE+DHL G LF + L LK + + +L + Sbjct: 121 IRVEYQNELGEKKTQEFEGYLAVVVQHELDHLDGTLFFERLPKDLKAAFLEEHRHELAEM 180 Query: 166 KARA 169 + RA Sbjct: 181 QRRA 184 >UniRef50_A9HS47 Peptide deformylase n=2 Tax=Alphaproteobacteria RepID=A9HS47_GLUDA Length = 176 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 10/171 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPV-EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M++L++ + L + A V + +I R++DDM ETM G GLAA QV + R+ Sbjct: 1 MTLLKIARMGHPVLLRRADEVADPTAPDIARLIDDMIETMEDARGAGLAAPQVHVSLRLF 60 Query: 60 VIDVS--------ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIR 110 V V + E VLINP L E + EGCLSIP R +VPR ++ Sbjct: 61 VYRVPAERSAGGDDPPRETSVLINPVLSLVDDEMALRPEGCLSIPGLRGMVPRHVRIAYS 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 LDR G+ + A G LA +QHE DHL G L+ ++ L Q +++ + Sbjct: 121 GLDRAGQAVQGVASGFLANVLQHEYDHLDGILYPMRMTDLGQMGFDEEIGR 171 >UniRef50_O51092 Peptide deformylase n=20 Tax=Borrelia RepID=DEF_BORBU Length = 172 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 2/166 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ P++ LR K +E ++ +I+ M E M G+GLAA QV + + V+ Sbjct: 8 MEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 66 Query: 64 SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 LV INP ++E S E + +EGCLSIP + R + V I D +GK F +E Sbjct: 67 ENKMARPLVFINPSIIETSYEFSSYKEGCLSIPGVYYDLMRPKAVVINFHDENGKSFTIE 126 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LA IQHEMDHL G LF+DY + ++ + + LKA+ Sbjct: 127 NSDFLARIIQHEMDHLNGVLFIDYYEEKLKNKLLKPYMRERGLKAK 172 >UniRef50_A3V199 Peptide deformylase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V199_9RHOB Length = 152 Score = 185 bits (470), Expect = 7e-46, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 4/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L + D LR VA+PV + ++ +V +M TMYA G GLAA QV + QR+ V Sbjct: 1 MA-LDLRFDGDPVLRAVAEPVTAFDEDLALLVAEMLATMYAAPGRGLAAPQVGVSQRVFV 59 Query: 61 IDVSENRD--ERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ID + + +NP+++ +S T E CLSIP++ V R V +R D G Sbjct: 60 IDTTWKDGDPDPQAFVNPQIIARSKTTATAVEACLSIPDRAFAVTRPIWVDMRWQDIAGD 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMD 145 + DG+ AIC+ HE DHL G L D Sbjct: 120 VQQGRFDGVAAICVCHEYDHLDGVLITD 147 >UniRef50_Q2JXI3 Peptide deformylase n=2 Tax=Synechococcus RepID=Q2JXI3_SYNJA Length = 175 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 10/155 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+ L++ + D L +VA+PV E +Q ++++M T+ +G+GLAA QV ++I Sbjct: 1 MT-LRLRQLGDPILTQVAEPVAEFGTPALQNLIEEMLATLKEAQGVGLAAPQVGFPLQVI 59 Query: 60 VIDVSENRD-------ERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRA 111 ++ N E LV++NP L S E + EGCLS+P R LV R+ +V++ Sbjct: 60 IVASRPNPRYPDAPQMEPLVMVNPRPLACSEEQVLGWEGCLSVPNCRGLVARSREVEVEY 119 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 +G + A QHE DHL G+LF+D Sbjct: 120 HTPEGSRQRVVWRDFPARIFQHEYDHLRGRLFLDR 154 >UniRef50_A8LLB9 Peptide deformylase n=16 Tax=Rhodobacterales RepID=A8LLB9_DINSH Length = 168 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 5/167 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG----IGLAATQVDIHQRI 58 + L PD RLR A PV E+ EI+ + DDM +TM A G GLAA Q+ + Q + Sbjct: 2 IRPFLSWPDARLRTPAAPVAEITDEIRTVWDDMIDTMEAMPGMGPGAGLAAPQIGVMQAL 61 Query: 59 IVIDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 V+D SE R + + NP++L S + EE ++P A + R V +R LD +G Sbjct: 62 AVVDASEERGRAIRMANPQVLHASAQLRSHEEASPNLPGVFAKIDRPRAVTVRFLDANGA 121 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E + GL A +QH++DHL G+++ D LS K+ + +K KL R Sbjct: 122 VKEQDFVGLWATSVQHQIDHLAGRMYFDRLSKTKRDMLLRKARKLAR 168 >UniRef50_Q88EA7 Peptide deformylase 2 n=45 Tax=Bacteria RepID=DEF2_PSEPK Length = 178 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 11/161 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 + +L + DERL ++A PV E +AE+Q+++DDMFETM G+GLAA QV I +++ Sbjct: 2 IRDILKMGDERLLRIAPPVPEHMLGSAELQQLIDDMFETMRHVGGVGLAAPQVGIDLQLV 61 Query: 60 VIDVSENRDER-------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRA 111 + + +L+NP + S E EGCLS+P R +VPR + + + Sbjct: 62 IFGFERSERYPDAEAVPQTILLNPVITPTSSEVEDGWEGCLSVPGLRGVVPRFKHICYQG 121 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 +D G P ADG A +QHE DHL+G+L+ + + Sbjct: 122 IDPQGSPINRFADGFHARVVQHECDHLIGRLYPSRIQDFAK 162 >UniRef50_B8DUA2 Peptide deformylase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUA2_BIFA0 Length = 160 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 3/149 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +PD LR P+ E+ ++ +V D+ +T+ G++A Q+ + R Sbjct: 1 MAIREIRVVPDPVLRTPCDPITEITPAVRNLVQDLLDTVDDPGRAGVSANQIGVSLRAFS 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ ++NP L E GE +EGCLS+P+ RA+ ++R +D DG Sbjct: 61 YNIDGKIG---YVLNPVLEETRGEQYGDEGCLSLPKLWYKTKRADYARVRGMDLDGNEIV 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSP 149 LE DG++ +QHE DHL G L++D L Sbjct: 118 LEGDGIMGRMLQHETDHLDGHLYIDRLEK 146 >UniRef50_Q825U9 Peptide deformylase 3 n=6 Tax=Actinomycetales RepID=DEF3_STRAW Length = 224 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 15/158 (9%) Query: 4 LQVLHIPDERLRKVAKPVE-EVNAEI-QRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L ++ D LR+ A+P + ++ + R V+ + TM+A G+GLAA QV + RI VI Sbjct: 33 LPIVAAGDPVLRRGAEPYDGQLGPGLLARFVEALRLTMHAAPGVGLAAPQVGVGLRIAVI 92 Query: 62 DVSENRDERL------------VLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVK 108 + E + VL+NP S EGCLS+P +A+V R +V+ Sbjct: 93 EDPAPVPEEVGAVRGRVPQPFRVLVNPSYEAVGSDRAAFFEGCLSVPGWQAVVARPARVR 152 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 + ALD G+ + E G A +QHE DHL G L++D Sbjct: 153 LTALDEHGRAVDEEFTGWPARIVQHETDHLDGMLYLDR 190 >UniRef50_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago truncatula RepID=Q2HVV8_MEDTR Length = 266 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 24/185 (12%) Query: 5 QVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 ++ D L + A+ V+ + +IQ+I+D M M GI L+A ++ I RIIV+ Sbjct: 66 HIVQAGDPVLHEPAREVDHSEINSDKIQKIIDGMILVMRNAPGISLSAQKIGIPLRIIVL 125 Query: 62 DVSEN----------------RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRA 104 + + + LV++NP+L KS +T EGCLS+ +A+V R Sbjct: 126 EEPKENLYNYTEEVNKIIDRRPFDLLVILNPKLKIKSNKTFLFFEGCLSVHGFQAVVERY 185 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 V++ DR G+P ++ A G A +QHE DHL G L++D + P R + E ++ Sbjct: 186 LDVEVEGFDRYGEPIKINASGWHARILQHECDHLDGTLYVDKMVP----RTFRSWENINM 241 Query: 165 LKARA 169 ARA Sbjct: 242 SIARA 246 >UniRef50_D0J8Y3 Peptide deformylase n=2 Tax=Blattabacterium RepID=D0J8Y3_BLASP Length = 180 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 10/157 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVN--AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 +L ++ + LRK ++ + +IQ +V DMFET++ +GIGLAA Q+ + R+ + Sbjct: 2 ILPIVVYGNPILRKKCIDIDIYSCRKKIQELVKDMFETIHKVKGIGLAAPQIGKNIRLFI 61 Query: 61 IDVS-------ENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++ + + + V IN +L+ G E EGCLSIP V R V I Sbjct: 62 VETPYLLENGKDIDNYKEVFINARILKIHGKEYEFNEGCLSIPGIMGYVKRKSHVSIEYY 121 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP 149 D + K + G+ A IQHE DH+ GKLF+DY S Sbjct: 122 DHNWKKKKETLKGICARVIQHEYDHMEGKLFIDYFSS 158 >UniRef50_C0ZWJ9 Peptide deformylase n=2 Tax=Rhodococcus erythropolis RepID=C0ZWJ9_RHOE4 Length = 188 Score = 181 bits (462), Expect = 5e-45, Method: Composition-based stats. Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 7/174 (4%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + ++ L A+PV E +++Q ++ DMF T A G GLAA Q+ + + + Sbjct: 11 TAQPIIRWGTPVLHAPARPVTEFGSDLQDLLADMFATNTAAHGAGLAAQQIGVDLAVFIY 70 Query: 62 DVSENRDERL--VLINPE--LLEKSGETGIE--EGCLSIPEQRALVPRAEKVKIRALDRD 115 D ++ + V+ NP L E ++ EGCLS+P + R + R D+ Sbjct: 71 DCTDEVGTQRTGVVCNPVVDLPEAVDRQLVDDCEGCLSLPGAYTDLARPDFSTCRGNDQY 130 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ-RIRQKVEKLDRLKAR 168 G P E+ A G L C QHE DH+ G +F D L K++ R E D+ A Sbjct: 131 GNPIEITAGGTLGRCFQHETDHINGIVFGDRLPTRKRKQLYRDHDEVSDQYTAH 184 >UniRef50_B6RGY0 Peptide deformylase 1A, chloroplastic n=3 Tax=Magnoliophyta RepID=DEF1A_ORYSJ Length = 260 Score = 181 bits (462), Expect = 6e-45, Method: Composition-based stats. Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 25/184 (13%) Query: 1 MSVLQ-VLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V + D L + A+ V + ++Q ++D M M G+GLAA Q+ + Sbjct: 68 MTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPL 127 Query: 57 RIIVIDVSENRDER----------------LVLINPELLEKSGETG-IEEGCLSIPEQRA 99 +IIV++ ++ LV+INP+L S T EGCLS+ RA Sbjct: 128 KIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRA 187 Query: 100 LVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 LV R V++ LDR+G+P ++EA G A +QHE DHL G L++D + P R + V Sbjct: 188 LVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVP----RTFRIV 243 Query: 160 EKLD 163 + LD Sbjct: 244 DNLD 247 >UniRef50_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJN4_ACIBL Length = 208 Score = 181 bits (461), Expect = 7e-45, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 24/185 (12%) Query: 4 LQVLHIPDERLRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 L+++ + LR A+P+ E + EI R+++DM +T+ G+GLAA QV + ++ + Sbjct: 15 LKLVQAGEPVLRTPAEPLAIKEIASREIARLIEDMRDTLEDAPGVGLAAPQVGVPIQLAI 74 Query: 61 ID---------VSENRDER-------LVLINPELLEKSG-ETGIEEGCLSIPEQRALVPR 103 I+ +E ER V+INP L + EGCLS+ A+VPR Sbjct: 75 IEDRAEYSKDIPTEQLAERGRVPVPFHVIINPVLKPLGKSQVDFFEGCLSVAGFIAVVPR 134 Query: 104 AEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 KV++ LD +G +EA G A +QHE+DHL G L++D + + + +E Sbjct: 135 YRKVRVTCLDENGAQRRIEASGWYARILQHEIDHLNGTLYVDRM----RSQTFASLENYA 190 Query: 164 RLKAR 168 R Sbjct: 191 RFLKH 195 >UniRef50_C2D8V2 Peptide deformylase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8V2_9ACTN Length = 187 Score = 181 bits (461), Expect = 8e-45, Method: Composition-based stats. Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 11/167 (6%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 +++ P L+ V +PV+E+ EI+ + MFE MYA +G GLAA Q+ + R++VID Sbjct: 13 EMVCAPSVILQTVCEPVKEITQEIKDLAHHMFEVMYATDGCGLAAPQIGKNIRLVVIDCE 72 Query: 65 ENRD---ERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + VL+NP+++ + + EGCLS P V R V AL+ DG Sbjct: 73 WGEGSRKKPYVLVNPKIVVADEADRSMSEGCLSYPGILVPVKRPSHVICEALNLDGDLIR 132 Query: 121 LEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 EA G LLA C+QHE DHL G D+L + +K+EKL+ K Sbjct: 133 YEARGNLLAACLQHECDHLQGVTIPDHLP------LHKKMEKLEEYK 173 >UniRef50_A4E6J7 Peptide deformylase n=3 Tax=Collinsella RepID=A4E6J7_9ACTN Length = 180 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 5/173 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M ++ PD RLR+ +EE+ I+ + + M + M+ G GLAA Q+ +++ Sbjct: 3 MEANGIVLSPDPRLRQECAVIEEITPAIEALAEKMKKIMFENGGCGLAAPQIGELIQLVT 62 Query: 61 IDV---SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 ID +N + VLINP ++E+S EGCLSIP + R + V + A D D Sbjct: 63 IDCDYSDKNDYDPYVLINPVIVEQSDHLVPFSEGCLSIPGISCEIERPDHVVVEAYDLDA 122 Query: 117 KPFELEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 EA G L +C+QHE+DHL G + L P+++ + ++ + AR Sbjct: 123 NLIRYEATGDLFCVCLQHEIDHLHGNTMFERLKPMQRIKAVKEYQDALARGAR 175 >UniRef50_B0MFU0 Peptide deformylase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFU0_9FIRM Length = 153 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE-GIGLAATQVDIHQRII 59 M+V ++ D L+K K V EV+ + ++ +DD+ +T+++ + G LAA Q I +R+I Sbjct: 1 MAVRKIRTGNDPILKKKCKTVPEVDDKARQQLDDLMDTLHSSDNGAALAANQAGILRRMI 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID L L+NP ++E SG EGCLS P + R +VK+ ALD +G Sbjct: 61 VIDY---EGYYLKLVNPVIVESSGSQECVEGCLSFPNRFGKTIRPARVKVEALDENGHEV 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL 147 G +A C HE+DHL G++F+D + Sbjct: 118 SYTVVGEMAKCFCHEIDHLDGEVFIDKV 145 >UniRef50_Q057D2 Peptide deformylase n=2 Tax=Buchnera aphidicola (Cinara cedri) RepID=DEF_BUCCC Length = 149 Score = 180 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 73/149 (48%), Positives = 109/149 (73%), Gaps = 1/149 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ ++L PD RLR ++KP++ +N + ++I+ DMF+TMYA GIGLAA Q++I ++IIV Sbjct: 1 MSIRKILQFPDYRLRLLSKPIKIINKKTKKIIYDMFDTMYANNGIGLAAPQINILKQIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 I + LVLINP +L+K+ + EGCLSIP++ A + R+ +KI+A++ GK F Sbjct: 61 ISSLKPTMSELVLINPVILKKNKKYINTIEGCLSIPKKTAKIKRSSCIKIQAINTYGKSF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 L A LL+ICIQHE+DHL+GKLF+DY++ Sbjct: 121 TLTAKSLLSICIQHEIDHLIGKLFIDYIN 149 >UniRef50_B5YLS0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YLS0_THAPS Length = 192 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 4/161 (2%) Query: 6 VLHIPDERLRKV-AKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 + P LR+V P+ + + Q +M MY +G+GLAA Q+ +++ + V + S Sbjct: 15 ITEYPRPALRRVPNTPISQFDDAFQTKAKEMLMIMYESKGVGLAAPQIGLNENVFVYNPS 74 Query: 65 ENRDERLVLINPELLEKSGETGIE-EGCLSI--PEQRALVPRAEKVKIRALDRDGKPFEL 121 ++++ ++ NP++ + S E +E EGCLS+ E V R+ ++ + +G+ Sbjct: 75 DSKNMERIVCNPKITKYSEEVIVEQEGCLSMRSDEVAGQVARSAWIECEYENEEGQKVRR 134 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 A QHE DHL G L D P ++ ++ + L Sbjct: 135 RLKDFEARVFQHEYDHLKGILCYDRFPPEDREAAQENINTL 175 >UniRef50_A3M399 Peptide deformylase n=16 Tax=Acinetobacter RepID=A3M399_ACIBT Length = 160 Score = 179 bits (456), Expect = 3e-44, Method: Composition-based stats. Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 12/160 (7%) Query: 1 MSV-LQVLHIPDERLRKVAKPVE--EVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 MSV L V ++ L+ +A PV E+N+ + ++ D M TM G+G+AA QV I + Sbjct: 1 MSVVLPVAKRGEDILKLIAAPVSANELNSNWLYQLADAMHATMLERNGVGIAAPQVYISK 60 Query: 57 RIIVIDVSENRDER-------LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108 RII++ N +V++NPE+LE S ET + EEGCLS+P++R V RAE VK Sbjct: 61 RIIIVASRPNPRYPDAPEMNAVVMVNPEILEFSSETCLGEEGCLSVPDERGQVERAEMVK 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 ++ L G+ E G A +QHE+DHL G LF++ +S Sbjct: 121 VKYLTLQGEAVETIFHGFPARIVQHEVDHLNGILFVERIS 160 >UniRef50_Q2RVK0 Peptide deformylase n=2 Tax=Rhodospirillales RepID=Q2RVK0_RHORT Length = 169 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 82/159 (51%), Gaps = 9/159 (5%) Query: 12 ERLRKVAKPVEE-VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 L +A+PVE+ + +I R+V DM ET+ G+GLAA QV + R+++ V NR Sbjct: 2 PVLAGIARPVEDPTDPKIHRLVADMIETLADSGGVGLAAPQVHVPLRVMIFHVPANRSTE 61 Query: 71 -------LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 VLINP+L E EGCLS+P LVPR ++ R +D DG+ E E Sbjct: 62 AEGAVPLTVLINPQLTPLGEEMVEDWEGCLSLPGLTGLVPRYRSLRYRGVDLDGREVERE 121 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 A A +QHE DHL G L+ L Q +++ K Sbjct: 122 ARDFHARVVQHEYDHLDGVLYPRRLRDPSQFGFVEEIRK 160 >UniRef50_Q9RD27 Peptide deformylase 1 n=10 Tax=Actinomycetales RepID=DEF1_STRCO Length = 218 Score = 178 bits (452), Expect = 8e-44, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 15/158 (9%) Query: 4 LQVLHIPDERLRKVAKPVE-EVNAEI-QRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L ++ D LR+ A+P + +V + +R V+ + TM+A G+GLAA QV + R+ VI Sbjct: 24 LPIVAAGDPVLRRAAEPYDGQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVI 83 Query: 62 DVSENRDERL------------VLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVK 108 + + + VL+NP G EGCLS+P +A+V R +V+ Sbjct: 84 EDPAPVPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHAEVR 143 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 +RA D G+ + G A +QHE DHL G L++D Sbjct: 144 LRAHDEHGRAVDEVFAGWPARIVQHETDHLDGTLYLDR 181 >UniRef50_B5G8K4 Peptide deformylase n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8K4_9ACTO Length = 216 Score = 178 bits (452), Expect = 8e-44, Method: Composition-based stats. Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 6/165 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L+V + +E L + + R+V DMF TMY EG GLAA QV + R+ V Sbjct: 24 MLRVTEVGEEILARRCAEATVFGTPGLARLVADMFLTMYLAEGAGLAANQVGVDLRLFVY 83 Query: 62 DVSENRDERLV--LINPELLEK-SGETGIE--EGCLSIPEQRALVPRAEKVKIRALDRDG 116 D ++ R V ++N + E SG +E EGCLS+P R + RA++ +R +DRDG Sbjct: 84 DRFDDEGARHVGHVLNRVIDEAASGRALVEDVEGCLSVPGARHGLARADRTVLRGVDRDG 143 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +P +E G A C+QHE DHL G +++D L ++ + + + Sbjct: 144 RPVTIEGTGYFARCLQHETDHLNGMVYVDRLGKRARRAVLADMAE 188 >UniRef50_A9G9J7 Peptide deformylase n=2 Tax=Myxococcales RepID=A9G9J7_SORC5 Length = 191 Score = 178 bits (452), Expect = 8e-44, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 11/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++L++ HI + LR+ A+ V E + +Q +DD+ ETM G G+AATQV + R Sbjct: 1 MTLLKIAHIGNPVLRQRAREVTEEELSSPAMQAFIDDLVETMRDANGAGIAATQVHVPVR 60 Query: 58 IIVIDVSENRDERL-------VLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKI 109 I ++V +N V++NP + + ET EGCLS+P R +V R ++++ Sbjct: 61 IFAVEVQDNPRYPYKPNIPLTVVVNPVIEPLTQETFENYEGCLSVPNLRGVVDRTTEIRL 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 LDR+G+P + GL A QHE DH+ G LF+D + + + ++ + Sbjct: 121 TGLDREGRPIDRVVRGLSAGTFQHEKDHVDGVLFVDRVKDPRTLCTWAEFDRYHK 175 >UniRef50_B4U7R8 Peptide deformylase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7R8_HYDS0 Length = 164 Score = 178 bits (452), Expect = 9e-44, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 94/163 (57%), Gaps = 8/163 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE-GIGLAATQVDIHQRIIVI 61 + ++L P+ L++ +K V +++ I + ++++ ETMY+++ G+A++QV + Q I+V+ Sbjct: 2 IYEILVYPNPLLKEKSKDVNKIDDNIIKHIENLKETMYSKDFCTGIASSQVGVLQNIVVM 61 Query: 62 D------VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D +N + LINP +++ EGCLS+PE A + R + V ++ALD Sbjct: 62 DASRFRKPPKNHHGLITLINPVIIKSEDSIIFREGCLSVPEYTANIQRYKHVSVKALDEK 121 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 L+ +G A+ QHE+DHL G LF+D L+ L ++K Sbjct: 122 ENEIILDLEGPEAVLFQHELDHLNGILFLDRLTSLD-NLFKRK 163 >UniRef50_A9EYX4 Peptide deformylase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EYX4_SORC5 Length = 203 Score = 177 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 83/175 (47%), Gaps = 28/175 (16%) Query: 1 MSVLQVLHIPDERLRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M + ++ LRK A PV E ++ +V M M G+GLAA Q+ + Q+ Sbjct: 1 MELPPIVLAGRAVLRKPAAPVPPEEIGTKRLKHLVSTMVSVMRKAPGVGLAAPQIGVDQQ 60 Query: 58 IIVIDVSENRDERL----------------VLINP--ELLEKS-------GETGIEEGCL 92 +IV++ SE RL V+INP +L S G EGCL Sbjct: 61 VIVLEDSEELMSRLTPGQRAERGRVPFRLRVIINPTLRVLAPSLPDAAGAGRATFFEGCL 120 Query: 93 SIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 S+P ALV R V++ +D DGK EA G A +QHE+DHL G L++D + Sbjct: 121 SVPGYMALVERDLSVEVSGVDEDGKEVRWEATGWPARILQHEVDHLRGTLYVDRM 175 >UniRef50_Q8XJX0 Peptide deformylase 2 n=8 Tax=Clostridium perfringens RepID=DEF2_CLOPE Length = 155 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 95/147 (64%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +++ I E L+KV++PV++VN E++ ++ D+ +T+ EGIGLAA Q+ +++R++ Sbjct: 1 MAVKKIVQIGHEALKKVSEPVKDVN-EVKGLIQDLKDTLATVEGIGLAAPQIAVNKRVVY 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 I+ + +E VLINPE+ S ET + EGCLS LV R V+I+AL+ G+ Sbjct: 60 INFGDGENE-YVLINPEVTGVSKETYEDYEGCLSYVMHEGLVERPRAVRIQALNEKGELK 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDY 146 EA LLA C HE+DHL G +++D Sbjct: 119 VYEAQDLLARCFLHEIDHLEGIMYVDR 145 >UniRef50_D2MKZ1 Formylmethionine deformylase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKZ1_9BACT Length = 160 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 5/148 (3%) Query: 18 AKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS-ENRDERLVL 73 A+PV+ + Q+ +DDMFETM A EGIGLAA QV +++IV+ ++ VL Sbjct: 2 AEPVDPAIIPSRAYQQFIDDMFETMDAYEGIGLAAPQVSRSEQLIVMRCDGQDAIPETVL 61 Query: 74 INPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQ 132 INP ++ + + EGCLS+ R V R ++++ALDR+G+ + EA GL +CIQ Sbjct: 62 INPRIVFYGPAQAEMWEGCLSVDGLRGKVTRPSSIRVQALDREGRSVDFEASGLFGVCIQ 121 Query: 133 HEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 HEMDHL+GKLF+D ++ L ++ + Sbjct: 122 HEMDHLIGKLFLDRMTDLSSLTQLKEFD 149 >UniRef50_UPI0001C31BDE peptide deformylase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDE Length = 167 Score = 175 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 2/160 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + V D L+ A V + +++ + M E M GIGLAATQ+ R++V Sbjct: 1 MRYVRQFGDPVLKSRAMTVSRFDDDLREQIRGMGEIMNDAFGIGLAATQLGKLNRVLVYR 60 Query: 63 VSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 V E + L+NPEL E EEGCLS+ V R V++RA D G + Sbjct: 61 V-EQDSPAIALVNPELEWSGDELETAEEGCLSLRGVLVDVERPVHVRVRAQDEQGSTVII 119 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 EA GL A IQHEMDHL G L +D S ++++ + + + Sbjct: 120 EASGLEARVIQHEMDHLDGVLILDRTSRDQRKQAMRALRE 159 >UniRef50_Q0EWE9 Peptide deformylase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWE9_9PROT Length = 169 Score = 175 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 7/159 (4%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRIIVIDV 63 +L PDERLR+V V + ++++ + M A G +G+AA Q+ QR+IVID Sbjct: 11 DILKHPDERLRQVCPDVTDFGSDLEARFAQLDAVMRAAPGGVGIAAPQIGWQQRMIVIDC 70 Query: 64 SE-----NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 E + L + NP + G+ EGCLS+P+ A+V RA +++ D G Sbjct: 71 RESLRPCKNNGLLWMSNPVIESVEGKALGREGCLSVPDWVAMVERARSLQVSYDDVHGDR 130 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ 157 LE+ G A IQHE+DHL G LF+D + + +R+ Sbjct: 131 LSLESTGFEARVIQHELDHLDGILFIDRVVSA-RDLVRR 168 >UniRef50_B6KT47 Peptide deformylase, putative n=3 Tax=Toxoplasma gondii RepID=B6KT47_TOXGO Length = 353 Score = 175 bits (445), Expect = 5e-43, Method: Composition-based stats. Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 9/151 (5%) Query: 4 LQVLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 L VL P LR A P E + E + + D+ MY + G+GLAA QV + ++IV Sbjct: 185 LDVLAAPHTLLRLPAHP--EADWQAKETKELAKDLLAVMYRDGGVGLAAPQVGVSVQMIV 242 Query: 61 IDVSENRDE---RLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDG 116 + + + E V +NP LL G + EGCLS+P A V R ++R +G Sbjct: 243 WNPTGDVRESSRERVFLNPRLLSLYGPLVSDVEGCLSVPGVFAPVERPLHARVRYTSLEG 302 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 E GL A +QHE+DHL G LF+D + Sbjct: 303 IQREATLSGLEARVVQHEIDHLHGILFVDRV 333 >UniRef50_C0N4F6 Peptide deformylase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N4F6_9GAMM Length = 178 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 9/174 (5%) Query: 4 LQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + LR+ A+PV ++ Q + + + G+G+AA QV I Q+ ++ Sbjct: 5 FDILQLGHPLLRQRAEPVYDILAPAFQAQAKALLSFVIEKGGMGIAAPQVGISQQFFILS 64 Query: 63 VSENRDERLV-------LINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDR 114 N +INPE + S + EGCLS+P RALVPR + + +R Sbjct: 65 SHPNSRYPYAPDVPPFFVINPERIAHSDTSNKDWEGCLSLPGIRALVPRFDDITVRYQTL 124 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +G E DG LA QHE DHL G +F+D + + ++ +K A+ Sbjct: 125 EGDTVEKMYDGFLARVFQHEHDHLNGHVFLDRVESNYDVMMEKEWQKQIAQSAK 178 >UniRef50_Q8PGV2 Peptide deformylase 1 n=12 Tax=Proteobacteria RepID=DEF1_XANAC Length = 171 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 9/154 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + +++ + D+RL +VA PV + +AE+ +V DMFETM A G+GLAA Q+ + +++V Sbjct: 2 IREIIRMGDKRLLRVAPPVTNLGSAELHTLVADMFETMDAARGVGLAAPQIAVDLQLMVF 61 Query: 62 --DVSENRDE-----RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALD 113 D SE E R L N ++ S + EGCLSIP RA++PR ++ R Sbjct: 62 GFDASERYPEAPAVPRTALANAQIEPLSEDMENGWEGCLSIPGLRAVIPRYRFIRYRGFA 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL 147 DG P E +A+G A +QHE D+LVG+L+ + Sbjct: 122 PDGSPIERDAEGFHARVVQHEYDNLVGRLYPSRI 155 >UniRef50_B9JW15 Peptide deformylase n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JW15_AGRVS Length = 166 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 3/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++L P L K + V + + D ++ M A G+G+ A V R+++ Sbjct: 1 MA-LKILRYPHPLLAKPCQTVTAFDDRLISFADALYNAMRAAPGVGITAAHVGELMRLVI 59 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+ E R +NPE+L S T +EG + +P V R ++ +R DG Sbjct: 60 LDLPELGGRRD-YVNPEILSFSQNTLDHDEGSVCMPGMTETVTRPRQITLRYQSLDGTVR 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 E E AIC+QHE+D L G ++ LS LK+ R+ +K +K Sbjct: 119 EEELQDFAAICMQHEIDQLDGLFWIQRLSRLKRDRLLKKWQK 160 >UniRef50_Q6MDT4 Peptide deformylase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDT4_PARUW Length = 156 Score = 173 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 8/142 (5%) Query: 24 VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS-------ENRDERLVLINP 76 ++ +++++ DM ETM+ +GIGLAA QV + V V + V INP Sbjct: 4 IDDALKQLIYDMVETMHTMKGIGLAAPQVHHSISLFVTCVPVKNKNGLWESGKDRVFINP 63 Query: 77 ELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEM 135 ++L S ET EGCLSIP V R K+ ++A+D +G FE GL A HE Sbjct: 64 QILSMSEETQTFSEGCLSIPNLHMNVTRPAKITVQAVDLEGNLFEEIFTGLQATNFMHEY 123 Query: 136 DHLVGKLFMDYLSPLKQQRIRQ 157 DHL G L +DY S +++ + Q Sbjct: 124 DHLNGILIIDYYSLEERKSLEQ 145 >UniRef50_Q28V78 Peptide deformylase n=2 Tax=Rhodobacteraceae RepID=Q28V78_JANSC Length = 161 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 8/159 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV +VL PD L V V V+ E ++ D+F+TMYA +G GLAA Q+ + QR+ V Sbjct: 1 MSVRRVLLWPDPLLSVVCDAVVAVDPE---LIKDLFDTMYAAKGRGLAAPQIGVLQRVFV 57 Query: 61 IDVSENRD--ERLVLINPELLEKSGET--GIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +DV+ + V INP + SGE +EE CLSIP+ V R + + +G Sbjct: 58 VDVTWKEGARDPRVFINPV-VRDSGEDMRSMEEQCLSIPDLPMQVTRPTTLTLDWETPEG 116 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 + DG LA CI HE+DHL G + D+ SP ++ + Sbjct: 117 RKTTGTFDGNLARCILHELDHLDGTVIFDHQSPARRAEL 155 >UniRef50_D2PP12 Peptide deformylase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PP12_9ACTO Length = 240 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 15/162 (9%) Query: 3 VLQVLHIPDERLRKVAKPVE-EVNAEI-QRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 V ++ + D LR+ A+P + + + + + V+ + TM A G+GLAA QV + RI V Sbjct: 49 VAPIVQLGDPVLRRKAEPFDGQFDDGLLKDFVELLRRTMLAAPGVGLAAPQVGVPLRIAV 108 Query: 61 ID--------VSENRD----ERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKV 107 ++ V+E R+ E L ++NPE + + G EGCLS+P +V R KV Sbjct: 109 LEDPATVSAEVAEARERYPLEFLAVLNPEYAPRGRDKRGFYEGCLSMPGFTGVVSRPLKV 168 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP 149 D G L G A QHE DHL G+L++D + P Sbjct: 169 DAGYSDLTGARRRLTLSGWQARIFQHETDHLNGRLYVDQVEP 210 >UniRef50_UPI000051A696 PREDICTED: similar to CG31373-PA n=1 Tax=Apis mellifera RepID=UPI000051A696 Length = 224 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 20/165 (12%) Query: 6 VLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + + + LR+ A ++E E Q+I+D ++E + + +GLAA Q+ + ++ V++ Sbjct: 50 ICQVGNPVLRQKASFIDEKIIQTQEFQKILDHLYELLKKNDTVGLAAPQIGLPWQLFVVE 109 Query: 63 VSENRDERL----------------VLINPEL-LEKSGETGIEEGCLSIPEQRALVPRAE 105 ++E E + INP++ + S E E C SI A VPR + Sbjct: 110 MTEESIEHIHPYIRKCYGITPHPLTYFINPKMNIINSEEVVHFETCASIDCYYAEVPRPK 169 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 +V+I AL++ G+ F ++A+G LA I HEMDHL G L+ D + P Sbjct: 170 EVQIEALNKFGESFSMKAEGWLARIIHHEMDHLKGHLYTDRMFPF 214 >UniRef50_B3T9T4 Putative Polypeptide deformylase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9T4_9ZZZZ Length = 179 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 92/153 (60%), Gaps = 8/153 (5%) Query: 1 MSVLQVLHIPDERLRKV-----AKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIH 55 M++ + ++PD+ LR A+ V+ + +QR++D+M E+M+ G+G+A+ QV Sbjct: 1 MAIRPLRYLPDQLLRTKTVSLRARDVQ--SPAVQRLIDEMIESMHHYNGVGIASNQVGSR 58 Query: 56 QRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 RI +I E VL+NP + + GE + EGCLS+P + + R+E+V + ALDR Sbjct: 59 YRICIIQRPEEDAVPFVLVNPRITRREGEREVTEGCLSLPGYQGGIVRSERVWVTALDRQ 118 Query: 116 GKPFELEAD-GLLAICIQHEMDHLVGKLFMDYL 147 GK +L + GLLA ++HE DHL G F+D+L Sbjct: 119 GKQVQLRGETGLLAQALEHETDHLDGVAFIDHL 151 >UniRef50_UPI0000E48B64 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48B64 Length = 186 Score = 172 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 20/164 (12%) Query: 5 QVLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 V + D LR + PV + E Q ++ M M G+GLAA Q+ + Q++ V+ Sbjct: 8 HVTQVGDPVLRGKSDPVHPQDIRTKEFQDLIQKMVGVMRKTGGVGLAAPQIGVAQQVFVM 67 Query: 62 DVSENRDERL----------------VLINPELLEKSG-ETGIEEGCLSIPEQRALVPRA 104 + +E + V +NP L S + + EGCLS+ A PRA Sbjct: 68 EFTEKHMKGFSEEIQKAREMEVVPLKVFVNPSLKILSDNQVVLTEGCLSLTGFTAATPRA 127 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 +V+I L+ G+P G A +QHE DHL G L++D + Sbjct: 128 HEVEITGLNEKGEPVTWRVCGYPARILQHEYDHLQGTLYIDRMD 171 >UniRef50_A9B3X4 Peptide deformylase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3X4_HERA2 Length = 175 Score = 170 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 10/168 (5%) Query: 1 MSVLQVLHIPDERLRKVAKP-VEEVNAEIQRIVDDMFETMYAEE-----GIGLAATQVDI 54 M+V+ ++ + + LR+ A P + + E+ RI++DM +T+ G G+AA Q+ + Sbjct: 1 MAVVPLIELGNPLLRQPATPFADPTSPEVARILNDMRDTLADMRQRIGYGRGIAAPQIGV 60 Query: 55 HQRIIVIDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALD 113 +R+I+ID D LVL+NP S E E C S P LV R V + A Sbjct: 61 LKRLILIDTP---DTNLVLVNPRFERWSREEDERYESCFSFPGIWGLVQRPLGVTVVAYT 117 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G+ +EA G L+ IQHEMDHL G +++D L Q+ EK Sbjct: 118 LAGEEQRIEASGSLSRIIQHEMDHLDGFVWLDRGPDLHSLCTTQEYEK 165 >UniRef50_C6HZ73 Peptide deformylase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ73_9BACT Length = 175 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 5/155 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV ++ D LR ++PV+ E++++V D+F+T+ ++G+ +AA Q+ + R+ V Sbjct: 1 MSVRPLVSHRDTVLRIASEPVDPCAPEVRQVVQDLFDTLATQKGVAMAAPQIGVAMRLFV 60 Query: 61 IDVSENRDE-----RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D+ R++ R +LINP + + G + EGCLS P + R E V + D Sbjct: 61 FDLKRPREKGGPPTRGLLINPTIERRFGSIPVIEGCLSFPGLDLSIRRPEGVVVSGYGLD 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 GK LE GL A ++HE DHL G+L D + L Sbjct: 121 GKKVVLEGGGLFARMVEHETDHLEGRLLPDRQNGL 155 >UniRef50_Q1RIR7 Peptide deformylase n=2 Tax=Rickettsia bellii RepID=Q1RIR7_RICBR Length = 195 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 19/170 (11%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M +L+++ P+ LR + PV ++++++ + M ETMY EEGIG++A QV R ++ Sbjct: 9 MPILKIIKTPNSLLRIKSLPVTIIDSQMKDFMKSMLETMYNEEGIGISAIQVGKPIRALI 68 Query: 61 IDVSENRD-----ERLVLINPELLEKSGETGI-EEGCLSIPE------QRALVPRAEKVK 108 +D+ + + E +INPE+ S E I E CLSI + V R + + Sbjct: 69 VDIPKEENDQIKREPFFIINPEVNYLSEEKVILNEDCLSIRKEDGIAFIIGDVERPKNIS 128 Query: 109 IRALDRDGKPFELEADG-------LLAICIQHEMDHLVGKLFMDYLSPLK 151 I +D +G EL +G + C+QHE+DHL G LF+D L K Sbjct: 129 ISYIDLEGNSKELTCNGNNSDYDLWFSRCLQHELDHLDGILFIDRLYNAK 178 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q88RR1 Peptide deformylase 1 n=10 Tax=Proteobacteria Re... 227 9e-59 UniRef50_C1DFV8 Peptide deformylase n=4 Tax=Gammaproteobacteria ... 225 5e-58 UniRef50_Q7MGK6 Peptide deformylase 2 n=28 Tax=Gammaproteobacter... 222 4e-57 UniRef50_Q3J6U0 Peptide deformylase n=16 Tax=Proteobacteria RepI... 221 7e-57 UniRef50_Q5F5P6 Peptide deformylase n=409 Tax=cellular organisms... 219 3e-56 UniRef50_A3PMR8 Peptide deformylase n=5 Tax=Rhodobacteraceae Rep... 215 6e-55 UniRef50_C1F541 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_... 214 8e-55 UniRef50_A5EWL8 Peptide deformylase n=4 Tax=Proteobacteria RepID... 214 1e-54 UniRef50_Q1QTJ5 Peptide deformylase n=8 Tax=Proteobacteria RepID... 213 1e-54 UniRef50_Q1QET1 Peptide deformylase n=121 Tax=Proteobacteria Rep... 212 4e-54 UniRef50_C9RL37 Peptide deformylase n=1 Tax=Fibrobacter succinog... 210 2e-53 UniRef50_B1GZ10 Peptide deformylase n=1 Tax=uncultured Termite g... 209 2e-53 UniRef50_B5YIL7 Peptide deformylase n=41 Tax=Bacteria RepID=DEF_... 209 2e-53 UniRef50_B8ENG6 Peptide deformylase n=105 Tax=Proteobacteria Rep... 208 8e-53 UniRef50_A0LUE1 Peptide deformylase n=4 Tax=Actinomycetales RepI... 207 9e-53 UniRef50_Q65QF2 Peptide deformylase n=5 Tax=Gammaproteobacteria ... 207 1e-52 UniRef50_Q1QH78 Peptide deformylase n=23 Tax=Alphaproteobacteria... 206 2e-52 UniRef50_Q2NCT3 Peptide deformylase n=8 Tax=Sphingomonadales Rep... 206 2e-52 UniRef50_O66847 Peptide deformylase n=3 Tax=Aquificaceae RepID=D... 206 2e-52 UniRef50_B8D9R9 Peptide deformylase n=10 Tax=Gammaproteobacteria... 206 2e-52 UniRef50_B8JDM1 Peptide deformylase n=16 Tax=Bacteria RepID=B8JD... 205 4e-52 UniRef50_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetip... 205 6e-52 UniRef50_A0LEJ7 Peptide deformylase n=2 Tax=Deltaproteobacteria ... 205 7e-52 UniRef50_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychro... 203 2e-51 UniRef50_Q7MCQ2 Peptide deformylase 1 n=57 Tax=Gammaproteobacter... 203 3e-51 UniRef50_D2NTP6 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothi... 202 3e-51 UniRef50_Q0BUB2 Peptide deformylase n=14 Tax=Bacteria RepID=Q0BU... 202 5e-51 UniRef50_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine ba... 201 8e-51 UniRef50_A5ILS1 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_... 200 1e-50 UniRef50_Q023V6 Peptide deformylase n=2 Tax=Acidobacteria RepID=... 199 4e-50 UniRef50_B8HH62 Peptide deformylase n=11 Tax=Actinobacteridae Re... 198 5e-50 UniRef50_Q0F0I6 Peptide deformylase n=1 Tax=Mariprofundus ferroo... 198 5e-50 UniRef50_Q1Q7Q2 Peptide deformylase n=1 Tax=Candidatus Kuenenia ... 198 5e-50 UniRef50_B9S632 Polypeptide deformylase, putative n=2 Tax=fabids... 198 5e-50 UniRef50_C9P8G9 Peptide deformylase n=1 Tax=Vibrio metschnikovii... 198 7e-50 UniRef50_C0QI55 Peptide deformylase n=1 Tax=Desulfobacterium aut... 198 8e-50 UniRef50_C1QBP9 Peptide deformylase n=1 Tax=Brachyspira murdochi... 196 2e-49 UniRef50_B3CMB1 Peptide deformylase n=11 Tax=Rickettsiales RepID... 196 2e-49 UniRef50_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteri... 196 2e-49 UniRef50_A8LE21 Peptide deformylase n=17 Tax=Actinomycetales Rep... 196 3e-49 UniRef50_B2GGT8 Peptide deformylase n=8 Tax=Actinomycetales RepI... 196 3e-49 UniRef50_C9KJ27 Peptide deformylase n=1 Tax=Mitsuokella multacid... 196 3e-49 UniRef50_C3PG26 Peptide deformylase n=7 Tax=Corynebacterium RepI... 196 3e-49 UniRef50_B0RBE6 Peptide deformylase n=5 Tax=Actinobacteria (clas... 195 4e-49 UniRef50_Q826Q0 Peptide deformylase 2 n=20 Tax=Actinomycetales R... 195 6e-49 UniRef50_B8DMM6 Peptide deformylase n=12 Tax=Desulfovibrionales ... 195 7e-49 UniRef50_Q5GTG9 Peptide deformylase n=1 Tax=Wolbachia endosymbio... 194 8e-49 UniRef50_B0TGS8 Peptide deformylase n=14 Tax=Firmicutes RepID=DE... 194 8e-49 UniRef50_A9KM99 Peptide deformylase n=16 Tax=Bacteria RepID=DEF_... 194 1e-48 UniRef50_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=4 Tax=co... 194 1e-48 UniRef50_C4G2R8 Peptide deformylase n=6 Tax=Firmicutes RepID=C4G... 194 1e-48 UniRef50_Q8XJL2 Peptide deformylase 1 n=12 Tax=Clostridiales Rep... 193 1e-48 UniRef50_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans ... 193 1e-48 UniRef50_C4Z519 Peptide deformylase n=9 Tax=Clostridiales RepID=... 193 2e-48 UniRef50_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae... 193 2e-48 UniRef50_A6L9R8 Peptide deformylase n=8 Tax=Bacteroidales RepID=... 193 2e-48 UniRef50_D2R5E8 Peptide deformylase n=1 Tax=Pirellula staleyi DS... 193 2e-48 UniRef50_Q1GDF5 Peptide deformylase n=18 Tax=Rhodobacterales Rep... 193 3e-48 UniRef50_C0QZQ2 Peptide deformylase n=1 Tax=Brachyspira hyodysen... 192 3e-48 UniRef50_D0XQM3 Peptide deformylase n=2 Tax=Alphaproteobacteria ... 192 3e-48 UniRef50_Q3B2U9 Peptide deformylase n=11 Tax=Chlorobiaceae RepID... 192 4e-48 UniRef50_Q7VQC0 Peptide deformylase n=6 Tax=Gammaproteobacteria ... 192 5e-48 UniRef50_C4ZEV9 Peptide deformylase n=9 Tax=Clostridia RepID=DEF... 191 5e-48 UniRef50_C0Z4W7 Peptide deformylase n=4 Tax=Firmicutes RepID=C0Z... 191 7e-48 UniRef50_D1PY14 Peptide deformylase n=2 Tax=Prevotella RepID=D1P... 191 8e-48 UniRef50_B3L389 Formylmethionine deformylase, putative n=2 Tax=P... 191 9e-48 UniRef50_D1C7I8 Peptide deformylase n=1 Tax=Sphaerobacter thermo... 191 9e-48 UniRef50_D0LH18 Peptide deformylase n=2 Tax=Nannocystineae RepID... 191 9e-48 UniRef50_D0U631 Peptide deformylase n=2 Tax=uncultured actinobac... 191 9e-48 UniRef50_Q8NQ46 Peptide deformylase 1 n=8 Tax=Corynebacterium Re... 190 2e-47 UniRef50_B3QS23 Peptide deformylase n=1 Tax=Chloroherpeton thala... 190 2e-47 UniRef50_A5CF65 Peptide deformylase n=18 Tax=cellular organisms ... 190 2e-47 UniRef50_C7NGP0 Peptide deformylase n=2 Tax=Micrococcineae RepID... 190 2e-47 UniRef50_Q2J9M0 Peptide deformylase n=1 Tax=Frankia sp. CcI3 Rep... 190 2e-47 UniRef50_Q8NM41 Peptide deformylase 2 n=13 Tax=Actinomycetales R... 190 2e-47 UniRef50_Q6NH22 Peptide deformylase n=1 Tax=Corynebacterium diph... 190 2e-47 UniRef50_D1VET6 Peptide deformylase n=1 Tax=Frankia sp. EuI1c Re... 189 2e-47 UniRef50_A6DUA1 Peptide deformylase n=1 Tax=Lentisphaera araneos... 189 3e-47 UniRef50_Q8REF0 Peptide deformylase n=15 Tax=Fusobacterium RepID... 189 3e-47 UniRef50_B7RJW6 Peptide deformylase n=1 Tax=Roseobacter sp. GAI1... 189 3e-47 UniRef50_A6C970 Peptide deformylase n=2 Tax=Planctomycetaceae Re... 189 3e-47 UniRef50_B9L0C1 Peptide deformylase n=1 Tax=Thermomicrobium rose... 189 3e-47 UniRef50_C6BVK1 Peptide deformylase n=2 Tax=Desulfovibrio RepID=... 189 4e-47 UniRef50_A4A7C9 Peptide deformylase n=1 Tax=Congregibacter litor... 189 4e-47 UniRef50_Q17XD4 Peptide deformylase n=60 Tax=Epsilonproteobacter... 188 4e-47 UniRef50_C1A607 Peptide deformylase n=1 Tax=Gemmatimonas auranti... 188 5e-47 UniRef50_C8WW76 Peptide deformylase n=2 Tax=Alicyclobacillus aci... 188 5e-47 UniRef50_A6Q676 Peptide deformylase n=5 Tax=Epsilonproteobacteri... 188 6e-47 UniRef50_Q5VNN5 Peptide deformylase 1B, chloroplastic n=3 Tax=Or... 188 7e-47 UniRef50_C9LLK7 Peptide deformylase n=1 Tax=Dialister invisus DS... 188 7e-47 UniRef50_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio pe... 188 7e-47 UniRef50_B4DC77 Peptide deformylase n=2 Tax=Verrucomicrobia RepI... 188 8e-47 UniRef50_B9MR36 Peptide deformylase n=97 Tax=Firmicutes RepID=DE... 187 1e-46 UniRef50_Q8I372 Formylmethionine deformylase, putative n=2 Tax=P... 187 1e-46 UniRef50_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halop... 186 2e-46 UniRef50_A8ZUK5 Peptide deformylase n=2 Tax=Desulfobacteraceae R... 186 2e-46 UniRef50_B0VID6 Peptide deformylase n=1 Tax=Candidatus Cloacamon... 186 2e-46 UniRef50_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniph... 186 2e-46 UniRef50_C0WD89 Peptide deformylase n=1 Tax=Acidaminococcus sp. ... 186 3e-46 UniRef50_B9XGP3 Peptide deformylase n=1 Tax=bacterium Ellin514 R... 186 3e-46 UniRef50_Q2GE16 Peptide deformylase n=8 Tax=Rickettsiales RepID=... 186 3e-46 UniRef50_B2KD65 Peptide deformylase n=1 Tax=Elusimicrobium minut... 185 6e-46 UniRef50_Q8G487 Peptide deformylase 2 n=33 Tax=Bacteria RepID=DE... 185 6e-46 UniRef50_B0PFT9 Peptide deformylase n=1 Tax=Anaerotruncus coliho... 185 7e-46 UniRef50_C8PRC6 Peptide deformylase n=1 Tax=Treponema vincentii ... 185 7e-46 UniRef50_C6V4P2 Peptide deformylase n=1 Tax=Neorickettsia ristic... 185 8e-46 UniRef50_D0WE84 Peptide deformylase n=1 Tax=Slackia exigua ATCC ... 184 8e-46 UniRef50_A0Q456 Peptide deformylase n=18 Tax=Francisella RepID=A... 184 1e-45 UniRef50_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola ... 184 1e-45 UniRef50_A3DCX4 Peptide deformylase n=24 Tax=Clostridia RepID=DE... 184 1e-45 UniRef50_C0ZE47 Peptide deformylase n=1 Tax=Brevibacillus brevis... 184 1e-45 UniRef50_B9ZK41 Peptide deformylase n=1 Tax=Thioalkalivibrio sp.... 184 1e-45 UniRef50_A4RVA1 Peptide deformylase, organellar n=2 Tax=Eukaryot... 184 1e-45 UniRef50_B5EMH5 Peptide deformylase n=4 Tax=Proteobacteria RepID... 184 1e-45 UniRef50_A3EQF2 Peptide deformylase n=3 Tax=Leptospirillum RepID... 183 2e-45 UniRef50_C8W757 Peptide deformylase n=2 Tax=Atopobium RepID=C8W7... 183 2e-45 UniRef50_D1VSE6 Peptide deformylase n=1 Tax=Peptoniphilus lacrim... 183 2e-45 UniRef50_D2PNQ8 Peptide deformylase n=2 Tax=Propionibacterineae ... 183 2e-45 UniRef50_Q0BUX2 Peptide deformylase n=11 Tax=Alphaproteobacteria... 183 2e-45 UniRef50_B3DUG9 Peptide deformylase n=1 Tax=Methylacidiphilum in... 183 2e-45 UniRef50_Q8UF49 Peptide deformylase-like n=19 Tax=Rhizobiales Re... 183 2e-45 UniRef50_Q9FCA2 Peptide deformylase 2 n=4 Tax=Streptomyces RepID... 183 3e-45 UniRef50_Q1CVW8 Peptide deformylase n=2 Tax=Cystobacterineae Rep... 182 4e-45 UniRef50_A8U9S1 Peptide deformylase n=14 Tax=Lactobacillales Rep... 182 4e-45 UniRef50_Q0RM09 Peptide deformylase n=4 Tax=Actinomycetales RepI... 182 4e-45 UniRef50_B5YF46 Peptide deformylase n=2 Tax=Dictyoglomus RepID=D... 182 4e-45 UniRef50_Q1AVZ8 Peptide deformylase n=2 Tax=Bacteria RepID=Q1AVZ... 182 4e-45 UniRef50_A5FGV5 Peptide deformylase n=59 Tax=cellular organisms ... 182 4e-45 UniRef50_A9DWU1 Peptide deformylase n=2 Tax=Rhodobacteraceae Rep... 181 5e-45 UniRef50_Q6MD22 Peptide deformylase n=1 Tax=Candidatus Protochla... 181 6e-45 UniRef50_A6TRW8 Peptide deformylase n=4 Tax=Clostridiales RepID=... 181 6e-45 UniRef50_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula balti... 181 7e-45 UniRef50_A5D1C0 Peptide deformylase n=3 Tax=Clostridia RepID=DEF... 181 7e-45 UniRef50_C7NDD2 Peptide deformylase n=4 Tax=Fusobacteriaceae Rep... 181 9e-45 UniRef50_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscu... 181 1e-44 UniRef50_Q3ZXA9 Peptide deformylase n=5 Tax=Dehalococcoides RepI... 181 1e-44 UniRef50_D1R4B7 Peptide deformylase n=2 Tax=Parachlamydia acanth... 181 1e-44 UniRef50_C1ZAV5 Peptide deformylase n=1 Tax=Planctomyces limnoph... 181 1e-44 UniRef50_A7G6C0 Peptide deformylase n=14 Tax=Clostridium RepID=A... 180 1e-44 UniRef50_Q83CV9 Peptide deformylase 1 n=4 Tax=Coxiella burnetii ... 180 1e-44 UniRef50_B0SHH1 Peptide deformylase n=6 Tax=Leptospira RepID=DEF... 180 1e-44 UniRef50_C1MGI0 Peptide deformylase n=2 Tax=Viridiplantae RepID=... 180 1e-44 UniRef50_C7R2E5 Peptide deformylase n=1 Tax=Jonesia denitrifican... 180 1e-44 UniRef50_Q8YVH1 Peptide deformylase 2 n=25 Tax=Bacteria RepID=DE... 180 1e-44 UniRef50_Q3SKP4 Peptide deformylase n=6 Tax=Betaproteobacteria R... 180 2e-44 UniRef50_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chlorofle... 180 2e-44 UniRef50_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromo... 180 2e-44 UniRef50_D1ATH4 Peptide deformylase n=1 Tax=Anaplasma centrale s... 180 2e-44 UniRef50_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitre... 180 2e-44 UniRef50_A1AXL8 Peptide deformylase n=4 Tax=Gammaproteobacteria ... 179 3e-44 UniRef50_B1ZMD5 Peptide deformylase n=2 Tax=Verrucomicrobia RepI... 179 3e-44 UniRef50_C1DV92 Peptide deformylase n=4 Tax=Hydrogenothermaceae ... 179 4e-44 UniRef50_A3JYF4 Peptide deformylase n=1 Tax=Sagittula stellata E... 179 4e-44 UniRef50_A2BU25 Peptide deformylase n=50 Tax=cellular organisms ... 178 5e-44 UniRef50_Q9XAQ2 Peptide deformylase 3 n=23 Tax=Actinomycetales R... 178 7e-44 UniRef50_C8WHT7 Peptide deformylase n=3 Tax=Coriobacteriaceae Re... 178 7e-44 UniRef50_D2NSH9 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothi... 178 8e-44 UniRef50_A3EQQ7 Peptide deformylase n=2 Tax=Leptospirillum sp. G... 178 9e-44 UniRef50_Q72H33 Peptide deformylase n=8 Tax=Deinococci RepID=DEF... 178 9e-44 UniRef50_Q9K4A0 Peptide deformylase 4 n=7 Tax=Streptomyces RepID... 177 1e-43 UniRef50_C7H120 Peptide deformylase n=1 Tax=Eubacterium saphenum... 177 1e-43 UniRef50_A4WNU7 Peptide deformylase n=25 Tax=Rhodobacterales Rep... 177 1e-43 UniRef50_C5VIH1 Peptide deformylase n=2 Tax=Prevotella RepID=C5V... 177 1e-43 UniRef50_A1SJX1 Peptide deformylase n=1 Tax=Nocardioides sp. JS6... 176 2e-43 UniRef50_B3E344 Peptide deformylase n=11 Tax=Bacteria RepID=B3E3... 176 2e-43 UniRef50_D2N0L8 Peptide deformylase n=1 Tax=Campylobacter jejuni... 176 2e-43 UniRef50_A6W503 Peptide deformylase n=2 Tax=Actinomycetales RepI... 176 2e-43 UniRef50_P63919 Peptide deformylase-like n=42 Tax=Alphaproteobac... 176 2e-43 UniRef50_B5J0U4 Peptide deformylase n=1 Tax=Octadecabacter antar... 176 3e-43 UniRef50_B3CFT5 Peptide deformylase n=2 Tax=Bacteroides RepID=B3... 176 4e-43 UniRef50_P94462 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF... 175 4e-43 UniRef50_Q2S316 Peptide deformylase n=2 Tax=Rhodothermaceae RepI... 175 5e-43 UniRef50_A7GFN2 Peptide deformylase n=12 Tax=Clostridiales RepID... 175 5e-43 UniRef50_A4E6J7 Peptide deformylase n=3 Tax=Collinsella RepID=A4... 175 5e-43 UniRef50_D1CBE7 Peptide deformylase n=1 Tax=Thermobaculum terren... 175 6e-43 UniRef50_A5FVG7 Peptide deformylase n=1 Tax=Acidiphilium cryptum... 175 6e-43 UniRef50_D1N2T1 Peptide deformylase n=1 Tax=Victivallis vadensis... 174 8e-43 UniRef50_UPI0001C165F0 Polypeptide deformylase n=1 Tax=Raphidiop... 174 1e-42 UniRef50_P73441 Peptide deformylase n=10 Tax=Cyanobacteria RepID... 174 1e-42 UniRef50_D1BVC6 Peptide deformylase n=1 Tax=Xylanimonas cellulos... 174 1e-42 UniRef50_A3V199 Peptide deformylase n=1 Tax=Loktanella vestfolde... 174 1e-42 UniRef50_B2S3Z6 Peptide deformylase n=2 Tax=Treponema pallidum R... 173 2e-42 UniRef50_B8DUA2 Peptide deformylase n=4 Tax=Bifidobacterium anim... 173 2e-42 UniRef50_C7CNZ7 Peptide deformylase n=24 Tax=Enterococcus RepID=... 173 2e-42 UniRef50_A0PNK2 Peptide deformylase n=50 Tax=Actinomycetales Rep... 173 2e-42 UniRef50_C3J9U8 Peptide deformylase n=7 Tax=Bacteria RepID=C3J9U... 173 2e-42 UniRef50_A9G9J7 Peptide deformylase n=2 Tax=Myxococcales RepID=A... 173 2e-42 UniRef50_Q92HU7 Peptide deformylase-like n=10 Tax=cellular organ... 173 2e-42 UniRef50_C0N4F6 Peptide deformylase n=1 Tax=Methylophaga thiooxi... 173 3e-42 UniRef50_Q0SDG2 Peptide deformylase n=2 Tax=Actinomycetales RepI... 172 3e-42 UniRef50_D1XJU9 Peptide deformylase n=5 Tax=Streptomyces RepID=D... 172 4e-42 UniRef50_Q7V8G6 Peptide deformylase 1 n=78 Tax=Bacteria RepID=DE... 172 4e-42 UniRef50_A2SPW1 Peptide deformylase n=1 Tax=Methanocorpusculum l... 172 5e-42 UniRef50_D1B5G7 Peptide deformylase n=3 Tax=Synergistaceae RepID... 171 5e-42 UniRef50_C7PQZ8 Peptide deformylase n=1 Tax=Chitinophaga pinensi... 171 8e-42 UniRef50_C0VXF2 Peptide deformylase n=2 Tax=Corynebacterium gluc... 171 9e-42 UniRef50_Q253S4 Peptide deformylase n=14 Tax=Chlamydiaceae RepID... 171 1e-41 UniRef50_A9WHG7 Peptide deformylase n=5 Tax=Chloroflexaceae RepI... 170 1e-41 UniRef50_B9Z3A2 Peptide deformylase n=1 Tax=Lutiella nitroferrum... 170 2e-41 UniRef50_A8Z5V9 Peptide deformylase n=3 Tax=Candidatus Sulcia mu... 170 2e-41 UniRef50_B3ETT4 Peptide deformylase n=1 Tax=Candidatus Amoebophi... 170 2e-41 UniRef50_B5Y7H9 Peptide deformylase n=1 Tax=Coprothermobacter pr... 169 4e-41 UniRef50_A9AZ24 Peptide deformylase n=1 Tax=Herpetosiphon aurant... 169 4e-41 UniRef50_A8LLB9 Peptide deformylase n=16 Tax=Rhodobacterales Rep... 169 4e-41 UniRef50_D1YDB7 Peptide deformylase n=3 Tax=Propionibacterineae ... 168 5e-41 UniRef50_C6MYK8 Peptide deformylase n=1 Tax=Legionella drancourt... 168 6e-41 UniRef50_A9HS47 Peptide deformylase n=2 Tax=Alphaproteobacteria ... 168 6e-41 UniRef50_B4U7R8 Peptide deformylase n=1 Tax=Hydrogenobaculum sp.... 168 7e-41 UniRef50_Q9FV53 Peptide deformylase 1A, chloroplastic n=13 Tax=V... 168 8e-41 UniRef50_B0MFU0 Peptide deformylase n=1 Tax=Anaerostipes caccae ... 167 1e-40 UniRef50_Q83GH8 Peptide deformylase n=2 Tax=Tropheryma whipplei ... 167 1e-40 UniRef50_C1XRQ6 Peptide deformylase n=1 Tax=Meiothermus silvanus... 167 1e-40 UniRef50_O51092 Peptide deformylase n=20 Tax=Borrelia RepID=DEF_... 167 1e-40 UniRef50_C0ZWJ9 Peptide deformylase n=2 Tax=Rhodococcus erythrop... 167 1e-40 UniRef50_Q2JXI3 Peptide deformylase n=2 Tax=Synechococcus RepID=... 167 1e-40 UniRef50_C2D8V2 Peptide deformylase n=1 Tax=Atopobium vaginae DS... 166 2e-40 UniRef50_A0LDD7 Peptide deformylase n=5 Tax=Proteobacteria RepID... 166 2e-40 UniRef50_B2V9A0 Peptide deformylase n=4 Tax=Hydrogenothermaceae ... 166 3e-40 UniRef50_B9JW15 Peptide deformylase n=4 Tax=Rhizobium/Agrobacter... 165 4e-40 UniRef50_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago tr... 165 5e-40 UniRef50_Q7NJV3 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF... 164 7e-40 UniRef50_C6X128 Peptide deformylase n=5 Tax=Bacteroidetes RepID=... 164 9e-40 UniRef50_D0J8Y3 Peptide deformylase n=2 Tax=Blattabacterium RepI... 164 1e-39 UniRef50_A7BDR6 Peptide deformylase n=1 Tax=Actinomyces odontoly... 163 2e-39 UniRef50_Q88EA7 Peptide deformylase 2 n=45 Tax=Bacteria RepID=DE... 163 2e-39 UniRef50_Q28V78 Peptide deformylase n=2 Tax=Rhodobacteraceae Rep... 162 4e-39 UniRef50_A9B3X4 Peptide deformylase n=1 Tax=Herpetosiphon aurant... 162 5e-39 UniRef50_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacte... 161 6e-39 UniRef50_B3T9T4 Putative Polypeptide deformylase n=1 Tax=uncultu... 161 9e-39 UniRef50_UPI0001C31BDE peptide deformylase n=1 Tax=Conexibacter ... 160 1e-38 UniRef50_B6KT47 Peptide deformylase, putative n=3 Tax=Toxoplasma... 160 2e-38 UniRef50_Q6MDT4 Peptide deformylase n=1 Tax=Candidatus Protochla... 159 3e-38 UniRef50_Q8PGV2 Peptide deformylase 1 n=12 Tax=Proteobacteria Re... 159 4e-38 UniRef50_A3M399 Peptide deformylase n=16 Tax=Acinetobacter RepID... 158 6e-38 UniRef50_UPI0001C30F16 peptide deformylase n=1 Tax=Conexibacter ... 158 7e-38 UniRef50_D2PP12 Peptide deformylase n=1 Tax=Kribbella flavida DS... 158 8e-38 UniRef50_Q2RVK0 Peptide deformylase n=2 Tax=Rhodospirillales Rep... 158 9e-38 UniRef50_B6RGY0 Peptide deformylase 1A, chloroplastic n=3 Tax=Ma... 157 1e-37 UniRef50_B5YLS0 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 157 1e-37 UniRef50_Q057D2 Peptide deformylase n=2 Tax=Buchnera aphidicola ... 157 1e-37 UniRef50_Q825U9 Peptide deformylase 3 n=6 Tax=Actinomycetales Re... 157 1e-37 UniRef50_D2MKZ1 Formylmethionine deformylase n=1 Tax=Candidatus ... 157 2e-37 UniRef50_B5G8K4 Peptide deformylase n=1 Tax=Streptomyces sp. SPB... 157 2e-37 UniRef50_C6HZ73 Peptide deformylase n=1 Tax=Leptospirillum ferro... 156 4e-37 UniRef50_Q1Z8Z7 Peptide deformylase n=2 Tax=Photobacterium profu... 155 4e-37 UniRef50_A2SPY2 Peptide deformylase n=1 Tax=Methanocorpusculum l... 155 4e-37 UniRef50_Q8XJX0 Peptide deformylase 2 n=8 Tax=Clostridium perfri... 155 6e-37 UniRef50_Q8EHZ2 Peptide deformylase 2 n=14 Tax=Shewanella RepID=... 154 8e-37 UniRef50_Q4V5F8 IP07194p (Fragment) n=9 Tax=Drosophila RepID=Q4V... 154 9e-37 UniRef50_Q9RD27 Peptide deformylase 1 n=10 Tax=Actinomycetales R... 154 1e-36 Sequences not found previously or not previously below threshold: >UniRef50_Q88RR1 Peptide deformylase 1 n=10 Tax=Proteobacteria RepID=DEF1_PSEPK Length = 168 Score = 227 bits (580), Expect = 9e-59, Method: Composition-based stats. Identities = 90/168 (53%), Positives = 127/168 (75%), Gaps = 1/168 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +AKPV E + +++++DDMFETMY GIGLAATQV++H++++V Sbjct: 1 MAILNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE+R E V INP + E + + +EGCLS+P V R +V+++A DRDGKPF Sbjct: 61 MDLSEDRSEPRVFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 ELE +GLLA+C+QHE DHL GKLF+DYLS LK+ RI++K+EK R +A Sbjct: 121 ELECEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA 168 >UniRef50_C1DFV8 Peptide deformylase n=4 Tax=Gammaproteobacteria RepID=DEF_AZOVD Length = 168 Score = 225 bits (574), Expect = 5e-58, Method: Composition-based stats. Identities = 98/167 (58%), Positives = 129/167 (77%), Gaps = 1/167 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +AKP+E V+ I+R++DDMFETMYA GIGLAATQV++H+R++V Sbjct: 1 MAILTILEFPDPRLRTIAKPIETVDDGIRRLIDDMFETMYAAPGIGLAATQVNVHKRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE+++E V INPE + E +EGCLS+P V R +KV+IRALDRDG+PF Sbjct: 61 MDLSEDKNEPRVFINPEFEALTEELEPYQEGCLSVPGFYENVDRPQKVRIRALDRDGQPF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 EL A+GLLA+CIQHE DHL GKLF+DYLS LK+ RIR+K+EK R Sbjct: 121 ELVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQH 167 >UniRef50_Q7MGK6 Peptide deformylase 2 n=28 Tax=Gammaproteobacteria RepID=DEF2_VIBVY Length = 202 Score = 222 bits (566), Expect = 4e-57, Method: Composition-based stats. Identities = 122/168 (72%), Positives = 143/168 (85%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVLQVL PD+RLR VAKPVE+V EIQ+IVDDM ETMY EEGIGLAATQVDIHQRI+V Sbjct: 33 MSVLQVLTFPDDRLRTVAKPVEKVTPEIQKIVDDMIETMYDEEGIGLAATQVDIHQRIVV 92 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+SE+R+E +VLINPE+LEK GE GIEEGCLS+P RALVPRA +V ++ALDRDG F Sbjct: 93 IDISESRNEPMVLINPEILEKRGEDGIEEGCLSVPGARALVPRAAEVTVKALDRDGHEFT 152 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LEAD LLAICIQHE+DHL GKLF+DYLSPLK++RI+ K+ K+ R + Sbjct: 153 LEADDLLAICIQHELDHLQGKLFVDYLSPLKRKRIQDKLAKIKRFNEK 200 >UniRef50_Q3J6U0 Peptide deformylase n=16 Tax=Proteobacteria RepID=DEF_NITOC Length = 167 Score = 221 bits (564), Expect = 7e-57, Method: Composition-based stats. Identities = 89/167 (53%), Positives = 122/167 (73%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +LH PD RLR+ A+PV V+ I+++ DDM ETMY GIGLAA QV++ ++++V Sbjct: 1 MAILNILHYPDPRLRRKAQPVAAVDKSIKKLADDMLETMYQAPGIGLAAVQVNVPKQVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+SE++ LVLINPE++ + G+ EEGCLS+PE V RA ++ + LDR+G+ E Sbjct: 61 IDISEDKSSPLVLINPEIVARQGKAESEEGCLSVPEIFEPVTRAAEITVHYLDREGQKQE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L+ LLA CIQHE+DHL GKLF+DY S LK+QRIR+K EK RL A Sbjct: 121 LQTQELLATCIQHELDHLEGKLFIDYFSTLKRQRIRKKAEKRQRLSA 167 >UniRef50_Q5F5P6 Peptide deformylase n=409 Tax=cellular organisms RepID=DEF_NEIG1 Length = 167 Score = 219 bits (559), Expect = 3e-56, Method: Composition-based stats. Identities = 94/166 (56%), Positives = 127/166 (76%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PDERL VAKPVE+V+ I+++V DMFETMY GIGLAATQVD+H+R++V Sbjct: 1 MALLNILQYPDERLHTVAKPVEQVDERIRKLVADMFETMYESRGIGLAATQVDVHERVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D++E+R E V INP ++EK GET EEGCLS+P V RAE+VK+ AL+ G+ F Sbjct: 61 MDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDAVTRAERVKVEALNEKGEKFT 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 LEADGLLAIC+QHE+DHL+G +F++ LS LKQ RI+ K++K + Sbjct: 121 LEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLKKRQKHT 166 >UniRef50_A3PMR8 Peptide deformylase n=5 Tax=Rhodobacteraceae RepID=A3PMR8_RHOS1 Length = 177 Score = 215 bits (547), Expect = 6e-55, Method: Composition-based stats. Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 4/171 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +L PD RL+K+ PV ++ +++R+ DDM TMY GIGLAA QV + +R+IV+D Sbjct: 2 IRPILIHPDPRLKKICDPVGQITDDLRRLADDMLATMYDAPGIGLAAPQVGVVRRLIVLD 61 Query: 63 VSENRD---ERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 ++ D + ++NPE++ +S + EEGCLS+P A V R +VK+R DG+ Sbjct: 62 CNKESDGARRPVAMVNPEVVWRSEDVSTYEEGCLSLPNVFADVERPAEVKVRWTGLDGRE 121 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E + GL A C+QHE+DHL GKLF+DYL PLK+Q I +K+EK R +A Sbjct: 122 EEEQFAGLWATCVQHEIDHLDGKLFIDYLRPLKRQMITRKMEKFKRAQASG 172 >UniRef50_C1F541 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_ACIC5 Length = 170 Score = 214 bits (546), Expect = 8e-55, Method: Composition-based stats. Identities = 78/166 (46%), Positives = 116/166 (69%), Gaps = 2/166 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + ++ PD L++ A+PV E N E++ +VDDMFE+MY +GIGLAA Q+ I +R+ V Sbjct: 1 MMIRPIVKYPDPVLQQPAEPVTEFNEELRALVDDMFESMYEAKGIGLAAPQIGISKRLTV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 ID+S EN DE++VLINPE++ + G EEGCLS+P+ R V RAEKV +RA + DG+ Sbjct: 61 IDLSFKENPDEKIVLINPEIIHREGRQYEEEGCLSLPDIREKVVRAEKVTVRAQNLDGEW 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 FE++ + LL+ QHE+DHL G LF+ +S LK+ + +++ K+ R Sbjct: 121 FEMDGEELLSRAFQHEIDHLDGVLFIFRISALKRDLVLRRIRKMQR 166 >UniRef50_A5EWL8 Peptide deformylase n=4 Tax=Proteobacteria RepID=DEF_DICNV Length = 181 Score = 214 bits (545), Expect = 1e-54, Method: Composition-based stats. Identities = 79/181 (43%), Positives = 114/181 (62%), Gaps = 12/181 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L PD RLR A+PV + + IV +M+ETMY GIGLAA QV+I QR+IV Sbjct: 1 MAIYSILIHPDPRLRLPAQPVTHFDDALAEIVQNMYETMYHFHGIGLAAPQVNIQQRLIV 60 Query: 61 IDVSEN-----------RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVK 108 +DV + ++LVL+NPE++++S E EEGCLS+P Q ALV R + Sbjct: 61 MDVPQRSAEEGEKAEQIPSDKLVLVNPEIVQRSEECQDYEEGCLSLPNQYALVTRPANIT 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +R D G E A GLL++CIQHE+DHL G LF+D+LS LK++R+ +K+ K + + Sbjct: 121 VRYQDITGATQERAAQGLLSVCIQHEIDHLNGGLFIDHLSRLKRERLEKKLAKSLKNTKK 180 Query: 169 A 169 + Sbjct: 181 S 181 >UniRef50_Q1QTJ5 Peptide deformylase n=8 Tax=Proteobacteria RepID=DEF_CHRSD Length = 170 Score = 213 bits (544), Expect = 1e-54, Method: Composition-based stats. Identities = 100/165 (60%), Positives = 126/165 (76%), Gaps = 1/165 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L +L PDERLR A PVE V+ E +++VDDM ETMY +GIGLAATQVD+H+R+IV Sbjct: 1 MAKLTILEFPDERLRTKAAPVETVDDETRKLVDDMLETMYDAQGIGLAATQVDVHRRVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +DVS++R + VLINPE E ++EGCLSIPE A VPRA +V ++ALDRDG P+ Sbjct: 61 MDVSDDRSQPRVLINPEYTPLGDEREPMQEGCLSIPEYYAEVPRALRVSLKALDRDGNPY 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 ELEADGLLA CIQHE DHL G LF+DYLSPLK+ R+ +K++K R Sbjct: 121 ELEADGLLAHCIQHEYDHLEGVLFVDYLSPLKRDRVLKKMQKRHR 165 >UniRef50_Q1QET1 Peptide deformylase n=121 Tax=Proteobacteria RepID=DEF_PSYCK Length = 184 Score = 212 bits (540), Expect = 4e-54, Method: Composition-based stats. Identities = 86/169 (50%), Positives = 119/169 (70%), Gaps = 1/169 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L +L PD RLR +A PV+EV AEI+ ++ DM ETMY +GIGLAA+QVD H ++IV Sbjct: 1 MALLPILSYPDPRLRTIATPVKEVTAEIKTLITDMIETMYDAQGIGLAASQVDHHIQLIV 60 Query: 61 IDVSENRDERLVLINPELLEK-SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+SE++D V INP++ + EEGCLS+P+ V R KV+I ALD +G Sbjct: 61 MDLSEDKDSPRVFINPKVTPLVEEKQPYEEGCLSVPDVYDKVERPNKVRIEALDENGNKI 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + E +GLLA+CIQHEMDHL G +F+DYLS LKQ R R KV K+ +++ + Sbjct: 121 DEEVEGLLAVCIQHEMDHLNGVIFVDYLSRLKQTRARDKVRKVLKIREK 169 >UniRef50_C9RL37 Peptide deformylase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL37_FIBSS Length = 179 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 6/173 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + D LRK +P+ E+ E++++ DM ETMY G GLAA Q+ + R++V Sbjct: 1 MAILPIRIYGDPVLRKKCEPITEITPELRQLAKDMLETMYDAPGCGLAAPQIGKNIRLVV 60 Query: 61 ID---VSENRDERLVLINPELLEKSG--ETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ID E ++ NPE + +EGCLS+PE V R ++V +R D + Sbjct: 61 IDTAIPDEEEPRPYIMFNPEWEAEPDAKNVDYDEGCLSLPEIFCNVVRPDRVTVRFFDIN 120 Query: 116 GKPFELE-ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 G+ E+ +GL A CIQHE DHL G LF+D +S + + K+ K+ + Sbjct: 121 GEAQEIHNCEGLFARCIQHECDHLNGDLFVDKISTSDRTMNQSKLRKMAKETQ 173 >UniRef50_B1GZ10 Peptide deformylase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=DEF_UNCTG Length = 168 Score = 209 bits (533), Expect = 2e-53, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 90/156 (57%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++ D LRK A+ V E+N I+ + DM ETMY+ G+GLAA QV I R V Sbjct: 1 MAKLKIKKYGDPALRKRAEAVSEINEIIKELASDMLETMYSASGVGLAAPQVGILLRFCV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV N+ +V+INPE++ + EEGCLS P V R E + D +G E Sbjct: 61 IDVDPNKKSPIVMINPEIISGENKITAEEGCLSFPGFYGNVNRFENIIAGYTDLNGNRQE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 ++A LA +QHE+DHL KLF+DYL K++ I Sbjct: 121 IKAQNFLAKALQHEIDHLDAKLFIDYLPDWKRESIE 156 >UniRef50_B5YIL7 Peptide deformylase n=41 Tax=Bacteria RepID=DEF_THEYD Length = 165 Score = 209 bits (533), Expect = 2e-53, Method: Composition-based stats. Identities = 75/162 (46%), Positives = 112/162 (69%), Gaps = 2/162 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ PDE L+K A+ + E+N ++Q+++D+M ETMY GIGLAA QV + +R+IV Sbjct: 1 MAILEIKKYPDEVLKKKAETISEINGDLQKLIDNMIETMYNANGIGLAAPQVGVLKRLIV 60 Query: 61 IDVSENRDER--LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +D S + +VLINPE+ + GE EEGCLS+P + R E+V ++ LDR+GK Sbjct: 61 VDTSPREQNQSLIVLINPEITDSEGEILSEEGCLSLPGFTTRLKRKERVIVKGLDRNGKE 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 E+EA GLLA +QHE+DHL G L +D +SPLK++ R+K + Sbjct: 121 IEIEATGLLARALQHEIDHLDGILLIDKISPLKRELFRKKFK 162 >UniRef50_B8ENG6 Peptide deformylase n=105 Tax=Proteobacteria RepID=DEF_METSB Length = 196 Score = 208 bits (529), Expect = 8e-53, Method: Composition-based stats. Identities = 89/174 (51%), Positives = 125/174 (71%), Gaps = 6/174 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + ++ +PD+RLR VA+PV V++E++ ++DDM ETMY GIGLAATQ+ + +R+IV Sbjct: 1 MPLRPIIILPDKRLRLVARPVASVDSEVRALMDDMLETMYEAPGIGLAATQIAVDRRVIV 60 Query: 61 IDVSENRDE-----RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 +DV++ RD+ + L NPE+L S E + EEGCLSIPE V R EKV++ LDR Sbjct: 61 LDVAKRRDDSAKADPICLANPEILWASEELSSYEEGCLSIPEFYEEVFRPEKVRVGYLDR 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DG+ E+EADGLLA C+QHE+DHL G LF+D++S LK+ RI +K EK +L A+ Sbjct: 121 DGRRREIEADGLLATCLQHEIDHLNGVLFIDHISRLKRARIIKKFEKAAKLDAQ 174 >UniRef50_A0LUE1 Peptide deformylase n=4 Tax=Actinomycetales RepID=DEF_ACIC1 Length = 180 Score = 207 bits (528), Expect = 9e-53, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 3/164 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + D LR A+PV + + E++ ++ D+ ETM G+GLAA Q+ + R+ V Sbjct: 1 MAVRPIRLFGDPVLRTPAEPVTDFDKELRVLIKDLIETMQDAPGVGLAAPQIGVSLRVFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 DV L+NP L + +EGCLS+P + RA++ + + G+P Sbjct: 61 YDVDGVVGH---LVNPSLDLSEEQQDGDEGCLSLPGLSYPLKRAKRAVAKGFNEFGEPVI 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 LE LLA C+QHE DHL G LF+D L P +++ + + + + Sbjct: 118 LEGSDLLARCVQHETDHLDGVLFIDRLDPEQRKLAMRAIREAEW 161 >UniRef50_Q65QF2 Peptide deformylase n=5 Tax=Gammaproteobacteria RepID=DEF_MANSM Length = 171 Score = 207 bits (527), Expect = 1e-52, Method: Composition-based stats. Identities = 107/168 (63%), Positives = 134/168 (79%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL VL PDERL+ +A+PV E N E+Q +DDMFETMY EEGIGLAATQVD+H+R+I Sbjct: 1 MSVLNVLIYPDERLKTIAEPVTEFNDELQTFIDDMFETMYQEEGIGLAATQVDVHKRVIT 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID++ + E+LVLINPELL+ GETGIEEGCLS+P R VPR EKV ++AL+R G+ F Sbjct: 61 IDITGEKTEQLVLINPELLDGEGETGIEEGCLSLPGLRGFVPRKEKVTVKALNRQGEEFT 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 L ADGLLAICIQHE+DHL G +F DYLSPLK+ R+++K+ KL + +R Sbjct: 121 LHADGLLAICIQHEIDHLNGIVFADYLSPLKRNRMKEKLVKLQKQISR 168 >UniRef50_Q1QH78 Peptide deformylase n=23 Tax=Alphaproteobacteria RepID=DEF_NITHX Length = 175 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 78/175 (44%), Positives = 115/175 (65%), Gaps = 7/175 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +++ +PD++LR V++P+E V EI+++ DDMFETMY GIGLA Q+ RII Sbjct: 1 MAIREIIILPDKQLRLVSRPIETVTPEIRKLADDMFETMYDAPGIGLAGIQIAQPLRIIT 60 Query: 61 IDVSENRDE------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALD 113 +D++ +E + INPE+L S E + EEGCLSIPE V R +V++R D Sbjct: 61 MDLARRDEEGELTPRPRIFINPEILSASEELSTYEEGCLSIPEYYEEVERPARVRVRFTD 120 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DGK E +A+G+ A CIQHE+DHL G LF+D++S LK+ R+ +K K +L A+ Sbjct: 121 LDGKVHEEDAEGIYATCIQHEIDHLNGVLFVDHISKLKRDRVVKKFTKAAKLAAK 175 >UniRef50_Q2NCT3 Peptide deformylase n=8 Tax=Sphingomonadales RepID=DEF_ERYLH Length = 194 Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 120/192 (62%), Gaps = 28/192 (14%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 M++ ++L +PD RL+ V++PV +E N +++++VDDMFETMYA GIGLAA QV + +R+ Sbjct: 1 MAIREILEVPDPRLKTVSEPVQPDEFNDDLKQLVDDMFETMYAAPGIGLAAIQVGVPKRV 60 Query: 59 IVIDVSEN-------------------------RDERLVLINPELLEKSGE-TGIEEGCL 92 +VID+ E +++ + INPE+++ + E + +EGCL Sbjct: 61 LVIDLQEPDMDAEPEECGHDHGDGEGAHKHYPVKNDPRIFINPEIIDPNEELSTYQEGCL 120 Query: 93 SIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 S+PE A V R + ++ D GK + + DGLLA C+QHEMDHL G LF+D+LS LK+ Sbjct: 121 SVPEIYADVDRPKTCTVKYQDLTGKTHQEDLDGLLATCLQHEMDHLEGILFIDHLSRLKK 180 Query: 153 QRIRQKVEKLDR 164 Q +K++K+ + Sbjct: 181 QMALKKLKKMRQ 192 >UniRef50_O66847 Peptide deformylase n=3 Tax=Aquificaceae RepID=DEF_AQUAE Length = 169 Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats. Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 3/168 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V ++ P+E L+K + V+ ++ E++ ++ DMF+TMY EG+GLAA Q+ + ++VID Sbjct: 2 VRDIVIYPNEILKKPTEKVDVIDKEVKNLIRDMFDTMYEAEGVGLAANQIGVPLSVMVID 61 Query: 63 VSENRDER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 S D LVLINPE+ E G+ +EGCLS P V R +KVK+ AL+ G+P Sbjct: 62 TSPKEDAPPLKLVLINPEIKEGEGKIKYKEGCLSFPGLSVEVERFQKVKVNALNEHGEPV 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 EL +G AI QHE+DHL G F+D L +++ +K +KL + + Sbjct: 122 ELTLEGFPAIVFQHELDHLKGITFVDRLKGWRRRMALEKYQKLLKSRK 169 >UniRef50_B8D9R9 Peptide deformylase n=10 Tax=Gammaproteobacteria RepID=DEF_BUCA5 Length = 173 Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats. Identities = 90/168 (53%), Positives = 134/168 (79%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L++L+ PD RLR +AKPV+E+N +IQ+I +DM +TMY EEGIGLAATQV+I +IIV Sbjct: 1 MSLLKILYYPDIRLRILAKPVKEINKKIQKIANDMIDTMYQEEGIGLAATQVNIPLQIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ E + LVLINP++++K G+ IEEGCLSIPE +A +PR+ ++++A++ DG+ E Sbjct: 61 VNTMEQKKNNLVLINPKIIKKEGDISIEEGCLSIPEYQASIPRSNYIQVQAVNLDGEKIE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +EA +L+ICIQHE+DHL GKLF+DYLS K++RI++K EK+++ + Sbjct: 121 IEAKSILSICIQHEIDHLKGKLFIDYLSKFKRERIQKKFEKINKKNKK 168 >UniRef50_B8JDM1 Peptide deformylase n=16 Tax=Bacteria RepID=B8JDM1_ANAD2 Length = 185 Score = 205 bits (523), Expect = 4e-52, Method: Composition-based stats. Identities = 81/167 (48%), Positives = 120/167 (71%), Gaps = 2/167 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ PD L++VA PV+ V+ I+R++DDM ETMYA +G+GLAA Q+ + +R+IVID Sbjct: 2 VREIVIWPDPILKEVAHPVDRVDDGIRRLLDDMAETMYAADGVGLAAPQIAVKKRVIVID 61 Query: 63 VSENRDERLV--LINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 S ++ + + L+NPE++ GE EGCLSIP + V R +V +RALD GKPFE Sbjct: 62 TSPRQEGQTLIHLVNPEIVRGEGELTYTEGCLSIPGEAEDVDRFARVWVRALDYHGKPFE 121 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 LEA+GLLA+ +QHE DHL G +F+D+LS LK++ IR++++KL +A Sbjct: 122 LEAEGLLAVALQHETDHLNGTVFVDHLSSLKRELIRKRMKKLKAQRA 168 >UniRef50_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP40_9BACT Length = 175 Score = 205 bits (521), Expect = 6e-52, Method: Composition-based stats. Identities = 74/163 (45%), Positives = 108/163 (66%), Gaps = 2/163 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+V PD+ LR A+PV+ ++ I ++D+M ETM+A G+GLAA QV I +R+IVID Sbjct: 2 ILEVKTFPDKVLRIKAEPVDSIDESITELLDNMVETMHARSGVGLAAPQVGISKRLIVID 61 Query: 63 --VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 EN L +INPE++ GE EEGCLSIP + V RAEKV ++A+D +GKP+ Sbjct: 62 TSAGENEGMLLRVINPEIISAEGEQVGEEGCLSIPGEYEPVRRAEKVTVKAMDENGKPYT 121 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 +EA+G LA QHE+DHL G LF+D L K+ +++ +++ Sbjct: 122 MEAEGFLARAFQHEIDHLDGVLFIDRLPSYKKDTLKKTIKRRI 164 >UniRef50_A0LEJ7 Peptide deformylase n=2 Tax=Deltaproteobacteria RepID=DEF_SYNFM Length = 170 Score = 205 bits (521), Expect = 7e-52, Method: Composition-based stats. Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 2/157 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + PD LR+ A VE ++ + +++DDM ETMY GIGLAA QV +IV Sbjct: 1 MAILDICTYPDPILRQKAASVENIDEALIKLIDDMTETMYEAPGIGLAANQVGRSLSLIV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 +D+ + +VLINP+++ GE EEGCLS+PE + V R +V +R RDGK Sbjct: 61 VDLQRQDEEHGLIVLINPQIVATQGEITWEEGCLSVPEYFSAVKRHAEVVVRGYGRDGKE 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 E++A GLLA+ +QHE+DHL G+LF+D L+P+ + Sbjct: 121 MEIQAGGLLAVALQHEIDHLEGRLFIDRLNPITRDIF 157 >UniRef50_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychrophila RepID=DEF_DESPS Length = 169 Score = 203 bits (517), Expect = 2e-51, Method: Composition-based stats. Identities = 62/165 (37%), Positives = 102/165 (61%), Gaps = 3/165 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ PD LRK + + ++ ++ +DM ETMY GIGLAA Q+ +++V Sbjct: 1 MAILKICTYPDPVLRKETVAITVFDEKLVKLTEDMAETMYDAPGIGLAAPQIGESLKLVV 60 Query: 61 IDV---SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 + +++ E +V+ NPE++EK EEGCLS+PE A+V R K+K+ D +G+ Sbjct: 61 VSTARREDSKQEYMVMANPEIVEKEESQVDEEGCLSVPELLAMVKRYRKIKVNYQDINGE 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 P + + A+ +QHE+DHL G LF+D+LS LK+ ++KV+K Sbjct: 121 PCSMTVEDRFAVVLQHEIDHLNGILFLDHLSSLKRNLYKKKVKKW 165 >UniRef50_Q7MCQ2 Peptide deformylase 1 n=57 Tax=Gammaproteobacteria RepID=DEF1_VIBVY Length = 168 Score = 203 bits (516), Expect = 3e-51, Method: Composition-based stats. Identities = 86/169 (50%), Positives = 119/169 (70%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAE-EGIGLAATQVDIHQRII 59 M+VL++L PD RLR +K V +V A +Q ++DD+ ET+Y G+GLAA QV + I+ Sbjct: 1 MAVLEILTAPDPRLRVQSKEVTDV-AAVQTLIDDLLETLYETDNGVGLAAPQVGREEAIV 59 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID+SENRDE LVL+NP+++ S + +EGCLS+P+ A V R V + ALDR+GK Sbjct: 60 VIDLSENRDEPLVLVNPKVVSGSNKEMGQEGCLSVPDYYADVERYTSVVVEALDRNGKEL 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +E LAI +QHE+DHL G LF+DYLSPLKQQ +KV+K ++L+AR Sbjct: 120 RIETSEFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHNKLRAR 168 >UniRef50_D2NTP6 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothia mucilaginosa RepID=D2NTP6_9MICC Length = 248 Score = 202 bits (515), Expect = 3e-51, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 8/168 (4%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 ++ ++ + L + A PV E N E++ +V DM+ETM A G+GLAA Q+ + RI Sbjct: 60 AIRPIVIHGNPVLHRPAAPVTEFNDELKELVADMYETMDASNGVGLAAPQIGVGLRIFTY 119 Query: 62 DVSENRDER--LVLINPELL------EKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 + +INP L EEGCLS P + RAE V + LD Sbjct: 120 KMENEDGVPPRGCIINPVLTLGKISTADPDPYEEEEGCLSFPGYGFPLKRAEWVTVNGLD 179 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G P EA G A C+QHE DHL GKL+++ L+ ++++ V+K Sbjct: 180 EHGNPVHFEATGWFARCMQHETDHLDGKLYVNRLNKKWTGKMKKVVKK 227 >UniRef50_Q0BUB2 Peptide deformylase n=14 Tax=Bacteria RepID=Q0BUB2_GRABC Length = 205 Score = 202 bits (514), Expect = 5e-51, Method: Composition-based stats. Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 3/170 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L +L P + L+ A+PV +A I+ +V MF TMY GIGLAA Q+D R+ V+ Sbjct: 36 LLPILIAPHKTLKTRARPVTAGDASLIRDLVPRMFATMYKAPGIGLAAPQIDSLLRLAVV 95 Query: 62 DV-SENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DV +++ LVLINP+++ +S E EEGCLS+P Q A V R ++K+R D DG Sbjct: 96 DVSPDDQKAPLVLINPDIIARSEEMATREEGCLSLPNQYADVTRPARIKLRYEDLDGSRR 155 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E+EAD LLA CIQHE+DHL G LF+D+LS LK+ + +++ K R + Sbjct: 156 EMEADDLLATCIQHEIDHLDGILFVDHLSTLKRNMLMRRLAKEQRQNSGG 205 >UniRef50_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine bacterium 313 RepID=Q6SHN7_9BACT Length = 185 Score = 201 bits (511), Expect = 8e-51, Method: Composition-based stats. Identities = 76/182 (41%), Positives = 115/182 (63%), Gaps = 14/182 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++L P++ LR+ + V+EV+ ++Q++++DM ETMYA GIGLAA QV + +R+IV Sbjct: 1 MALRKILTEPNKLLREKSLTVKEVDEDLQKLMNDMLETMYAAPGIGLAAIQVGVPKRVIV 60 Query: 61 IDVS-------------ENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEK 106 +D+ + R + +NPE++ KS + EEGCLS+P Q A + R +K Sbjct: 61 LDIGWRDKPESTNDEKQDERKNPIYFVNPEIITKSTNNSTYEEGCLSVPGQFAEIDRPDK 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 I+ LD G+P EL A+G+ A CIQHE+DHL G LF+DYLS LK+ I +K+ K Sbjct: 121 CHIKYLDYYGQPKELMAEGMFATCIQHEIDHLEGILFIDYLSKLKKSMIVKKLAKQKEQL 180 Query: 167 AR 168 R Sbjct: 181 DR 182 >UniRef50_A5ILS1 Peptide deformylase n=13 Tax=Bacteria RepID=DEF_THEP1 Length = 164 Score = 200 bits (509), Expect = 1e-50, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 4/167 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ D LRK AKPV + + +++ ++ M ETMY +G+GLAA QV I QR V+D Sbjct: 1 MYRIRVFGDPVLRKRAKPVTKFDDNLEKTIERMIETMYHYDGVGLAAPQVGISQRFFVMD 60 Query: 63 VSENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 V + +INPE+LE ET + EEGCLS PE + R++++K+R + G+ E Sbjct: 61 VGNG---PVAVINPEILEIDPETEVAEEGCLSFPEIFVEIERSKRIKVRYQNTKGEYVEE 117 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +G A QHE DHL G L +D +SP K+ +R+K+ + R R Sbjct: 118 VLEGYAARVFQHEFDHLNGVLIIDRISPAKRLLLRKKLMDIARTVKR 164 >UniRef50_Q023V6 Peptide deformylase n=2 Tax=Acidobacteria RepID=Q023V6_SOLUE Length = 171 Score = 199 bits (506), Expect = 4e-50, Method: Composition-based stats. Identities = 72/165 (43%), Positives = 107/165 (64%), Gaps = 3/165 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVN-AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 V ++ D L + A V E + E+ + +DDMFE+MYA +G+GLAA Q+ + ++I VI Sbjct: 2 VYPIVKFGDPVLEREADTVTEFDTPELHKFLDDMFESMYAAKGVGLAAPQIGVSKKIAVI 61 Query: 62 DV--SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 DV EN D++LV+INP++L+ G+ EEGCLSIP R V RA V IRA + G+ F Sbjct: 62 DVSNGENADDKLVIINPKILKIDGKQEGEEGCLSIPGFREQVRRARCVTIRAQNAKGEEF 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E + LLA HE DHL G+L++ ++S LK+ +++K++KL R Sbjct: 122 EKTGEDLLARAFLHETDHLYGRLYITHISALKRDLMKRKIKKLQR 166 >UniRef50_B8HH62 Peptide deformylase n=11 Tax=Actinobacteridae RepID=B8HH62_ARTCA Length = 204 Score = 198 bits (505), Expect = 5e-50, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 4/162 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + I D LR VA PV E E+ ++V DM ETM +G GLAA Q+ + +R+ Sbjct: 1 MAILNIRIIGDPVLRTVADPVTEFGPELAKLVADMTETMEDVDGAGLAAPQIGVSKRVFT 60 Query: 61 IDVSENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + +INP L + EGCLSIP V R ++ +D G P Sbjct: 61 YRIDGVEGH---IINPVLENSDDYQPDHVEGCLSIPGLGFPVRRFRATRVTGVDMHGNPV 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 LE +G+LA C QHE DHL G L+ D L ++ + + Sbjct: 118 SLEGEGMLARCFQHENDHLDGVLYTDRLEGEDRKAALRSIRN 159 >UniRef50_Q0F0I6 Peptide deformylase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0I6_9PROT Length = 180 Score = 198 bits (505), Expect = 5e-50, Method: Composition-based stats. Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 15/180 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V ++L PD+RL +V++PVE ++ E++ ++ DM +TMY G+GLAA QV RI Sbjct: 1 MAVREILIHPDDRLVQVSRPVEFPLSDEVKELIRDMADTMYDAPGVGLAAPQVGELLRIA 60 Query: 60 VID-------------VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAE 105 V D + E V INPE L KS E EEGCLS+PE V R Sbjct: 61 VTDTVWRDKEVRHDGDLPGGHRELKVWINPEFLWKSDEMETWEEGCLSVPETWGDVSRPA 120 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 +++R D G E + DG A+ +QHE DHL GKLF+DYLSPLK++ I +K++KL + Sbjct: 121 ALRLRWFDEHGVQHEQDFDGFQAVALQHEFDHLDGKLFIDYLSPLKRRMITKKMKKLYKS 180 >UniRef50_Q1Q7Q2 Peptide deformylase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7Q2_9BACT Length = 170 Score = 198 bits (505), Expect = 5e-50, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 99/165 (60%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 + ++ P LR+ AKP+ E+NA++ + + M E M GIGLAA QV R+ VIDV Sbjct: 1 MNIVTYPAPVLRQKAKPLTEINADVYKKAEKMVELMRRVHGIGLAAPQVGWSVRLFVIDV 60 Query: 64 SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 N + V INP ++E++GET EEGCLS P V R K+K+ A + +G+ E+ Sbjct: 61 VGNNVDDNVFINPSIMEEAGETSNEEGCLSFPGIMGKVIRTHKIKVCAYNLNGQKIEVVL 120 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + LLA QHE+DHL G LF+D +SP + Q++++L++ + Sbjct: 121 EDLLARAWQHELDHLNGCLFIDRMSPASRLAASQQLKELEQSYKK 165 >UniRef50_B9S632 Polypeptide deformylase, putative n=2 Tax=fabids RepID=B9S632_RICCO Length = 282 Score = 198 bits (504), Expect = 5e-50, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 3/164 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LR+ K ++ + ++++VD+MF+ MY +GIGL+A QV I+ +++V + Sbjct: 90 LKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP 149 Query: 64 SEN--RDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 E +VLINP L + S + EGCLS P A V R E VKI A D +G F Sbjct: 150 VGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFT 209 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + GL A QHE DHL G LF D ++ IR +++ L++ Sbjct: 210 VNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEK 253 >UniRef50_C9P8G9 Peptide deformylase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8G9_VIBME Length = 171 Score = 198 bits (504), Expect = 7e-50, Method: Composition-based stats. Identities = 76/169 (44%), Positives = 119/169 (70%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAE-EGIGLAATQVDIHQRII 59 M+VL++L PD RL+ A+ V+++ +Q+++DDM ET+Y+ GIGLA+ QV + ++ Sbjct: 1 MAVLEILTAPDPRLKITAEKVQDI-ESVQKLIDDMLETLYSTDNGIGLASVQVGRKEAVV 59 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +ID+S+NRD+ L+LINPE++ S + +EGCLS+P+ A V R V + ALDR G+ Sbjct: 60 IIDLSDNRDQPLILINPEVVSGSNKALGQEGCLSVPDYYAEVERYTSVVVSALDRTGQRI 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +E+D LAI +QHE+DHL G LF+DY+SPLK+Q +KV+K + ++ Sbjct: 120 TIESDDFLAIVMQHEIDHLSGNLFIDYISPLKRQMAMKKVKKYVKSHSQ 168 >UniRef50_C0QI55 Peptide deformylase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DEF_DESAH Length = 174 Score = 198 bits (503), Expect = 8e-50, Method: Composition-based stats. Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 8/169 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ P L K A VE ++ + ++V+DM ETM+ G+GLAA QV +RIIV Sbjct: 1 MALLEIYQYPAAVLLKKALQVETIDDTVIKLVNDMGETMFEAPGVGLAAPQVGQSRRIIV 60 Query: 61 IDV-------SENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRAL 112 + +E+ E LINPE++ SG E E CLS+P+ V R E V +R L Sbjct: 61 YNPQAGSSNANEDTKEFKALINPEIIASSGSIVSENEACLSVPDYSCNVKRFETVTVRGL 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 + +GK E +A GLLA+ +QHE+DHL G L++D +S LK+ ++KV K Sbjct: 121 NLEGKKLEFDAQGLLAVIMQHEIDHLDGILYIDRISTLKRNMYKKKVRK 169 >UniRef50_C1QBP9 Peptide deformylase n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBP9_9SPIR Length = 189 Score = 196 bits (500), Expect = 2e-49, Method: Composition-based stats. Identities = 69/173 (39%), Positives = 113/173 (65%), Gaps = 6/173 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +++ DERL++V++ +E+++ EI ++DDMFETMY E G+GLAA Q+ I +R+IVI Sbjct: 2 LRELVIYGDERLQQVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGILKRLIVIS 61 Query: 63 VSE-----NRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 V + D +L LINPE++ E +EEGCLS PE R V R +++K++ LD++G Sbjct: 62 VPDFDDETKPDFKLALINPEIIWHGEEKEILEEGCLSFPEIRDDVARYKEIKVKYLDKEG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LEA+G +A +QHE+DH G F+D L +++R++++++ L R Sbjct: 122 NEQILEAEGYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKDLRNNTVRG 174 >UniRef50_B3CMB1 Peptide deformylase n=11 Tax=Rickettsiales RepID=DEF_WOLPP Length = 179 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 11/179 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS L ++ PDERL A V ++ +I+ +V+DMFETMY EG+GLAA QV + +RI + Sbjct: 1 MSKLPIVIAPDERLTTRASEVIDITDKIKELVNDMFETMYYAEGLGLAAVQVGVLKRIFI 60 Query: 61 IDVSENRDE----------RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKI 109 +DV + E + +INPE+ E SGE ++EGCLSIPEQ + R + + + Sbjct: 61 MDVQPEKAEDGPAGYESTGKFCMINPEITELSGEQVILKEGCLSIPEQSHEIKRPKYLTV 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + + + + L+A G LA CIQHE+DHL G L++ +LS LK +K +K+ R + Sbjct: 121 KYKNLNNEEQTLKASGWLARCIQHELDHLNGILYVRHLSKLKYDMAMKKAQKVKRHYEQ 179 >UniRef50_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJL6_BDEBA Length = 201 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 18/178 (10%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 ++++L PD +LR+V++PV+ EI ++ +DM ETMY GIGLAA QV R++VID Sbjct: 2 IMKILTFPDPKLREVSQPVKTFGPEIAKLAEDMVETMYHANGIGLAAPQVGELVRMVVID 61 Query: 63 VSENRDE------------------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRA 104 ++ L+LINPE+++ G+T +EGCLSIP V R Sbjct: 62 TRPKDEKGRRYKYEEMTELEAAVKQPLILINPEIVKGEGKTTFDEGCLSIPGYYETVERY 121 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 ++++A D +GK + ++ DGLLAIC+QHEMDHL G LF+D+LS +K +I+ +++K Sbjct: 122 NYIEMKAFDVNGKEYIVKTDGLLAICMQHEMDHLEGTLFIDHLSFVKGNKIKNQIKKY 179 >UniRef50_A8LE21 Peptide deformylase n=17 Tax=Actinomycetales RepID=DEF_FRASN Length = 183 Score = 196 bits (498), Expect = 3e-49, Method: Composition-based stats. Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 3/168 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV + + D LR VA PV + E++R+VDD+ +TM G+GLAA Q+ + RI Sbjct: 1 MSVRDIRLLGDPVLRTVADPVATFDRELRRLVDDLADTMRDAGGVGLAAPQLGVSLRIFT 60 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ DE LINP L S E EEGCLS+P + R E+V + G P Sbjct: 61 YL--DDSDEVGHLINPVLGPFSEEMMDGEEGCLSLPGLAFDLRRPERVLAVGQNSHGDPV 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 +E G+L+ C+QHE DHL G LF+D L ++ + + + + Sbjct: 119 TVEGSGILSRCLQHETDHLDGILFIDRLDKETKRAAMKAIREAEWSNE 166 >UniRef50_B2GGT8 Peptide deformylase n=8 Tax=Actinomycetales RepID=B2GGT8_KOCRD Length = 249 Score = 196 bits (498), Expect = 3e-49, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L++ I D LR A+ V + + ++ +V DM ETMYA G+GLAA QV + +I Sbjct: 1 MSILRIRTIGDPVLRTPAQEVPQFDESLRTLVRDMVETMYAVGGVGLAAPQVGVGLQIFT 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + ++NP L EGCLS+P PR + + +D G+P Sbjct: 61 WGIEGDEGH---VVNPRLSVGHEPQDGGEGCLSVPGLSYETPRMDSATLTGVDMHGRPVH 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 +A GLLA C QHE DHL G L++D L ++ +++ Sbjct: 118 RDATGLLARCFQHETDHLRGTLYVDRLEGEHRRDAMRQLR 157 >UniRef50_C9KJ27 Peptide deformylase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ27_9FIRM Length = 155 Score = 196 bits (498), Expect = 3e-49, Method: Composition-based stats. Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L++ L++V PVE+++ ++++++DDM TMY +G+GLAA QV R++V Sbjct: 1 MAILEIKKAGAPVLKEVCAPVEKIDKDLRKLLDDMAVTMYESDGVGLAAPQVGRPIRVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID ++ + LINP + + G EGCLS+P V RA KVK+ L+R GK Sbjct: 61 IDCQDDHG-LIELINPVITFREGTATDTEGCLSVPGIYGEVERAAKVKVEFLNRRGKKQH 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 L A GLLA CIQHE+DHL G+LF+D L + Sbjct: 120 LTATGLLARCIQHELDHLEGQLFIDIAKSLHR 151 >UniRef50_C3PG26 Peptide deformylase n=7 Tax=Corynebacterium RepID=C3PG26_CORA7 Length = 169 Score = 196 bits (498), Expect = 3e-49, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V D L A+ + E ++R+ DM ETM G+GLAA Q+ + +RI V Sbjct: 1 MTVREVRLYGDPVLTTRAEEITEFGPSLERLAQDMLETMEDAGGVGLAANQIGVTKRIFV 60 Query: 61 IDVSE-NRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D S R +INPE E EGCLSIP R V++R D G+P Sbjct: 61 FDCSHFQHGLRGAVINPEWEAVGEEMQLGTEGCLSIPGISQPTERFSTVRLRGYDPQGRP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 + A GL+A CIQHE DHL G LF+ LS ++ + + + + + Sbjct: 121 VSMLASGLMARCIQHETDHLDGVLFLQRLSDELRKESMKTIRQAEWFNS 169 >UniRef50_B0RBE6 Peptide deformylase n=5 Tax=Actinobacteria (class) RepID=B0RBE6_CLAMS Length = 188 Score = 195 bits (497), Expect = 4e-49, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 8/169 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + D L A+ V+ + +++ +V DM+ETM G+GLAA QV + R+ V Sbjct: 1 MAVLPIRITGDPVLHAPARDVQAFDDDLRSLVADMYETMDEAPGVGLAAPQVGVPLRVFV 60 Query: 61 IDVSENRDERL--VLINPEL------LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 + E L V +NP+L + ++ E EEGCLS P +R + RA++ +RA+ Sbjct: 61 YSYETDDGEPLRGVAVNPDLFITPVAVREADEDTEEEGCLSFPGERFPLVRADRAILRAV 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D DG+P+E+EA G A +QHE DHL G L+ D L+ ++ + + + K Sbjct: 121 DLDGRPYEIEAAGWFARILQHEYDHLDGLLYTDRLAHEHRKPVAKVIRK 169 >UniRef50_Q826Q0 Peptide deformylase 2 n=20 Tax=Actinomycetales RepID=DEF2_STRAW Length = 186 Score = 195 bits (495), Expect = 6e-49, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 3/170 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V + + D L + V + E+ R+V+DMF TMYA G+GLAA Q+ + R+ V D Sbjct: 13 VRPLALLGDPVLHAPCEEVTDHGPELARLVEDMFATMYAANGVGLAANQIGVPLRVFVYD 72 Query: 63 VSENRDERLV--LINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ D R V ++NP L+E G EGCLS+P A R ++ + DG+P Sbjct: 73 CPDDEDVRHVGHVVNPRLIEADGVVLRGPEGCLSLPGLEAGTERYDRAVVEGFTTDGEPV 132 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + G A C+QHE DHL G +++D +S + +R+ ++ + + RA Sbjct: 133 RVLGTGWFARCLQHECDHLDGGVYVDRVSGWRHRRVMRQAARAPWNRQRA 182 >UniRef50_B8DMM6 Peptide deformylase n=12 Tax=Desulfovibrionales RepID=B8DMM6_DESVM Length = 184 Score = 195 bits (495), Expect = 7e-49, Method: Composition-based stats. Identities = 73/169 (43%), Positives = 107/169 (63%), Gaps = 3/169 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +VL PD RL + + E+ EI+++ DM ETMY ++GIGLAA QV H R+IV+D Sbjct: 2 IREVLQYPDPRLAVECEDITEITDEIRQLAADMAETMYRQDGIGLAAPQVGEHCRLIVVD 61 Query: 63 V--SENRDERLVLINPELLEKSGETGIEEGCLSIPE-QRALVPRAEKVKIRALDRDGKPF 119 V E R+ + +NP L + EEGCLS+P RA V R++ V++ A D DG Sbjct: 62 VSGPEKREALMTFVNPRLELTGDKVDSEEGCLSVPGGYRATVTRSDTVRLTARDLDGNEV 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 ++ADGLLA+C+QHE+DHL G LF+D++S LK+ +V+K+ + R Sbjct: 122 CMDADGLLAVCLQHEVDHLKGTLFIDHISRLKRTLYDSRVKKMQKNAPR 170 >UniRef50_Q5GTG9 Peptide deformylase n=1 Tax=Wolbachia endosymbiont strain TRS of Brugia malayi RepID=DEF_WOLTR Length = 179 Score = 194 bits (494), Expect = 8e-49, Method: Composition-based stats. Identities = 74/179 (41%), Positives = 106/179 (59%), Gaps = 11/179 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M L ++ PDERL A V +N +I+ +V+DMFETMY EG+GLAA Q+ + +RI V Sbjct: 1 MPKLSIVVAPDERLTTRASEVTGINDKIKELVNDMFETMYNAEGLGLAAVQIGVLKRIFV 60 Query: 61 IDV--SENRDERL--------VLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKI 109 +D+ + + E + +INPE+ E S E ++EGCLSIPEQ + R + + + Sbjct: 61 MDIQLEDIKGEPVGYESTGKFCMINPEITELSDEQVILKEGCLSIPEQSHEIRRPKYLTV 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + D + K L+A G LA CIQHE+DHL G L++ +LS LK +K EK R R Sbjct: 121 KYKDLNNKEQTLKASGWLARCIQHELDHLNGILYIRHLSKLKYDMAMKKAEKFKRHYER 179 >UniRef50_B0TGS8 Peptide deformylase n=14 Tax=Firmicutes RepID=DEF_HELMI Length = 151 Score = 194 bits (494), Expect = 8e-49, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 3/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++L + D LR+ AKPV N+ + R++DDMF+TM A G+GLAA Q+ I +R+ V Sbjct: 1 MAVYEILKMGDPVLREKAKPVTRFNSNLGRLIDDMFDTMAAARGVGLAAPQIGIGKRVCV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++V + R E L+NPE++E GE EGCLSIP+ V R ++V+++A DR G+ F Sbjct: 61 VEVGKRRFE---LVNPEIIEAEGEQCDAEGCLSIPDYTGRVKRFQRVRVKAQDRKGETFI 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLS 148 E LLA+ QHE+DHL G LF+D + Sbjct: 118 AEGTDLLAVAFQHEIDHLDGILFVDRVE 145 >UniRef50_A9KM99 Peptide deformylase n=16 Tax=Bacteria RepID=DEF_CLOPH Length = 163 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 65/150 (43%), Positives = 98/150 (65%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ + + D L K +K +EEV +I ++DDM +TMY G+GLAA QV + +R++V Sbjct: 1 MAKRNIRIMGDSILNKTSKVIEEVTPKIDTLIDDMLDTMYDAGGVGLAAPQVGVLKRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDVS +E ++LINPE++ GE +EGCLS+P + +V R VK++A DR KPFE Sbjct: 61 IDVSLEGNEPIILINPEIISTDGEQTGDEGCLSLPGKAGIVTRPNYVKVKAYDRHMKPFE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 +E +GLLA HE+DHL G L+++ ++ Sbjct: 121 VEGEGLLARAFCHEIDHLDGILYVEKVNGE 150 >UniRef50_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=4 Tax=core eudicotyledons RepID=DEF1B_ARATH Length = 273 Score = 194 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 3/168 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LR K ++ + ++ +VD MF+ MY +GIGL+A QV ++ +++V + Sbjct: 81 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 140 Query: 64 SENRDE--RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + E +VL+NP++ + S + +EGCLS P A V R + VKI A D G+ F Sbjct: 141 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 200 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 + L A QHE DHL G LF D ++ IR+++E L++ Sbjct: 201 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEE 248 >UniRef50_C4G2R8 Peptide deformylase n=6 Tax=Firmicutes RepID=C4G2R8_ABIDE Length = 175 Score = 194 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 100/147 (68%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + + DE L K A+ ++E + +IQ ++DDM ETMY +G+GLAA QV + +R+ V Sbjct: 1 MALRNIRIVGDEILNKRAREIKENSDKIQTLIDDMLETMYDADGVGLAAPQVGVLKRLFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID SE+R+E V INPE+LE SGE EGCLS+P + +V R E VK++AL+R+ + + Sbjct: 61 IDCSEDRNEPFVFINPEILETSGEQTGSEGCLSVPGKAGIVTRPEYVKMKALNREFEEYI 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +E +GL A + HE +HL G ++ + + Sbjct: 121 IEGEGLFARAMVHENEHLDGHIYTEKV 147 >UniRef50_Q8XJL2 Peptide deformylase 1 n=12 Tax=Clostridiales RepID=DEF1_CLOPE Length = 147 Score = 193 bits (492), Expect = 1e-48, Method: Composition-based stats. Identities = 73/146 (50%), Positives = 98/146 (67%), Gaps = 1/146 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + DE LRK + V+++N I+ +V+DM ETMY G+GLA+ QV I +RI V Sbjct: 1 MAIRNLRFNDDEILRKKCRVVDDINDRIKVLVEDMIETMYENNGVGLASPQVGILKRIFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D + R V INPE+LEKSGE EEGCLS+P + V RA K+KI+ALD +G F Sbjct: 61 VDAMDGAGSR-VFINPEILEKSGEQTDEEGCLSLPGRHKPVKRANKIKIKALDVNGNEFV 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDY 146 L+A+G LA IQHE DHL G LF+D+ Sbjct: 120 LDAEGFLARAIQHEYDHLEGVLFIDH 145 >UniRef50_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans RepID=Q7XYP8_BIGNA Length = 315 Score = 193 bits (492), Expect = 1e-48, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 89/170 (52%), Gaps = 4/170 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L V+ PD RLR + + E +Q + D+MF+ MY ++G GLAA QV I+ R++V + Sbjct: 122 LNVIKYPDPRLRTENEKITEFGKPLQELADEMFDVMYDDDGCGLAAPQVGINYRLMVFNP 181 Query: 64 SEN---RDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + +D +VL NPE++ E EGCLS P R V R KV IRA D G+ Sbjct: 182 QGDRRKKDTEMVLANPEIISSGEEKDWFREGCLSFPGIRGQVERPTKVLIRAQDVKGEDI 241 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E E +G A QHE DHL G LF D + + I K+ L+ A Sbjct: 242 EFELEGFTARVFQHEYDHLSGTLFHDRMPDKEVAEIHAKLVTLEDNFVEA 291 >UniRef50_C4Z519 Peptide deformylase n=9 Tax=Clostridiales RepID=C4Z519_EUBE2 Length = 171 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 93/150 (62%), Gaps = 3/150 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + + D+ LR AK + E+ I+ ++DDMF+TMY G+GLAA QV I +R++V Sbjct: 15 MAIRNIRTLGDDILRAKAKEITEMTPRIEELIDDMFDTMYEANGVGLAAPQVGIRKRLVV 74 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID ++ +VLINP +LE SG EGCLS+P + V R K++AL+ + + Sbjct: 75 IDCGDD---PIVLINPVVLETSGSQTGLEGCLSVPGKTGEVTRPNYAKVKALNENMEEII 131 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 +E + LLA C+ HE+DHL G +++D + Sbjct: 132 VEGEELLARCLLHEIDHLDGIMYVDKVEGE 161 >UniRef50_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae TMO RepID=DEF_THELT Length = 171 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 65/167 (38%), Positives = 98/167 (58%), Gaps = 5/167 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V ++ + D LRK +K VE V+ ++ D+FETMYA +GIGLAA Q+ + RI V+D Sbjct: 2 VKKIRLLGDPVLRKKSKNVERVDETTISLIKDLFETMYATDGIGLAAPQIGVSLRIFVMD 61 Query: 63 VSENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + V INPE++ KS E I EEGCLS+PE V R+++V +R ++ G+ E Sbjct: 62 ----DGKPRVFINPEIIYKSEEKEIAEEGCLSVPEVFEDVERSKEVTVRYMNEHGEEVEE 117 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A +QHE DHL G LF+D + ++ IR+K+ ++ R + Sbjct: 118 SFVDYSARVVQHEYDHLQGVLFIDLIPSSRRFAIRKKLIEIVRQSQK 164 >UniRef50_A6L9R8 Peptide deformylase n=8 Tax=Bacteroidales RepID=DEF_PARD8 Length = 185 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 100/175 (57%), Gaps = 8/175 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V LRK A+ V + +++++V +MFETMY +G+GLAA QV + R++VID Sbjct: 2 ILPVFLYGQPVLRKEAEDVPKDYPDLKQLVANMFETMYNADGVGLAAPQVGLSIRLVVID 61 Query: 63 -------VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDR 114 E + + LINPE LE+S E +EEGCLS+P V R++ V++R D Sbjct: 62 GDVMGDDFPECKGFKRALINPEFLERSEEEIAMEEGCLSLPGIHEKVSRSKTVRVRYWDE 121 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + + E +G A +QHE +HL G +F+D +S +++Q + K+ + + R Sbjct: 122 NWEEHEEVVEGFAARIVQHECEHLTGHVFIDNVSAIRRQLNKGKLNSIIKGTVRC 176 >UniRef50_D2R5E8 Peptide deformylase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5E8_9PLAN Length = 222 Score = 193 bits (490), Expect = 2e-48, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 2/166 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 LQ++ P LRKVAKP++ V+AE++ +V MF+ MY +GIGLAA QVD+ R+ VI++ Sbjct: 31 LQIITYPHPTLRKVAKPIKRVDAELRAMVAQMFDLMYEAKGIGLAANQVDLPLRLFVINL 90 Query: 64 --SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + + E LV INP L G EEGCLS+P V R + V++ A + G+ Sbjct: 91 TAEKGKGEELVFINPVLSHPKGSAEAEEGCLSLPGVYGQVVRPKTVQVNAYNLQGQEISA 150 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 E GLLA CIQHE DHL G +F D +S + + ++++ + Sbjct: 151 EVGGLLARCIQHENDHLDGVMFPDRMSESSRVELGGELQEFEDEFQ 196 >UniRef50_Q1GDF5 Peptide deformylase n=18 Tax=Rhodobacterales RepID=Q1GDF5_SILST Length = 169 Score = 193 bits (490), Expect = 3e-48, Method: Composition-based stats. Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 4/162 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ PD RL PV ++ ++DD+ ETMYA G GLAA QV + +R+ V Sbjct: 1 MSLLPIVQWPDPRLSTACAPVGAA-EDLGTLIDDVLETMYAAPGRGLAAPQVGVLKRVFV 59 Query: 61 IDVSENRDE--RLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +DV +V+I PE+L +S +T + +E CLSIP + R K++IR D D Sbjct: 60 MDVDWKEGPRNPVVMIYPEVLWRSDDTTLAKEACLSIPGLSTRITRPTKIRIRWQDADRA 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 E DG A CIQHE DHL G++ D+ S +++ + + Sbjct: 120 AQEQTFDGFAARCIQHEYDHLDGRVTFDHFSSEERRLLEAQY 161 >UniRef50_C0QZQ2 Peptide deformylase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=DEF_BRAHW Length = 187 Score = 192 bits (489), Expect = 3e-48, Method: Composition-based stats. Identities = 68/173 (39%), Positives = 113/173 (65%), Gaps = 6/173 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + +++ DERL+KV++ +E+++ EI ++DDMFETMY E G+GLAA Q+ + +R++VI Sbjct: 2 LRELVIYGDERLQKVSEKIEKIDDEILTLIDDMFETMYKERGVGLAAVQIGVLKRLVVIS 61 Query: 63 VSE-----NRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDG 116 V + D +L LINPE++ + ET EEGCLS PE R V R ++K++ LDR+G Sbjct: 62 VPDFDDEEKPDFKLALINPEIIWHNDETESLEEGCLSFPEIRDDVARYTQIKVKYLDREG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 L+A+ +A +QHE+DH G F+D L +++R+++++++L R Sbjct: 122 NEQILDAENYIAKVLQHEIDHTNGISFIDRLESYQKRRLKRELKELRNNTVRG 174 >UniRef50_D0XQM3 Peptide deformylase n=2 Tax=Alphaproteobacteria RepID=D0XQM3_9CAUL Length = 220 Score = 192 bits (489), Expect = 3e-48, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 25/194 (12%) Query: 1 MSVLQVLHIPD----ERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M++ ++L I + L++V+KPV V+ ++ ++DDM +TMY GIGLAA Q+ Q Sbjct: 27 MAIRRILTIDNTADLAILKQVSKPVAVVDDAVRALMDDMLDTMYDAPGIGLAAVQIGELQ 86 Query: 57 RIIVIDVSENRD--------------------ERLVLINPELLEKSGET-GIEEGCLSIP 95 R++V+D+ + +NPE++ S ET EEGCLSIP Sbjct: 87 RVVVMDLGDGPAPEAAEAAAEDEEGSEETRVPNPRFFVNPEVIWASDETFCYEEGCLSIP 146 Query: 96 EQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 E V R +V++ LDR G E E +GL A+C QHE+DHL G LF+D+LS L++ R Sbjct: 147 EYFDQVERPARVRVAYLDRTGARIEGEIEGLYAVCFQHELDHLNGVLFIDHLSRLRRDRA 206 Query: 156 RQKVEKLDRLKARA 169 KV+K RL+ A Sbjct: 207 MSKVKKTMRLREDA 220 >UniRef50_Q3B2U9 Peptide deformylase n=11 Tax=Chlorobiaceae RepID=DEF_PELLD Length = 190 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 62/165 (37%), Positives = 100/165 (60%), Gaps = 4/165 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + DE L + AKP++ V+A+I ++D MFE+M GIGLAA QV R++V+D Sbjct: 2 ILPINTYSDEVLHQKAKPLKGVDADISSLIDSMFESMENASGIGLAAPQVGCSIRLLVLD 61 Query: 63 VS----ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 VS +V+INP +L G+ +EEGCLS+P + V R ++ ++ DR+ + Sbjct: 62 VSCMKSYEDVPPMVVINPNVLAVRGKNLMEEGCLSVPGVQGDVLRPSEITLKYRDRNFQE 121 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E G+LA +QHE+DHL G LF+D + ++RI+Q+++ + Sbjct: 122 HTEEFSGMLARVLQHEIDHLNGTLFVDRMEKRDRRRIQQELDDIA 166 >UniRef50_Q7VQC0 Peptide deformylase n=6 Tax=Gammaproteobacteria RepID=DEF_BLOFL Length = 175 Score = 192 bits (488), Expect = 5e-48, Method: Composition-based stats. Identities = 92/163 (56%), Positives = 129/163 (79%), Gaps = 1/163 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+LQ+L+ PD+RLRK+A+ V ++ + ++I+ DMFETMY ++GIGLAATQVDIHQ+IIV Sbjct: 1 MSILQMLYYPDQRLRKIARSVSIISHDTKKIISDMFETMYFQQGIGLAATQVDIHQKIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ID++ N +RLV INP +++K G EGCLSIP+ RA VPR++ + +++LD +G F Sbjct: 61 IDLNNNIQKRLVFINPCIIKKIGTITHIIEGCLSIPKIRASVPRSQNIIVQSLDENGNNF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 E+EA LL++CIQHE+DHL+GKLF+DYLSP K QRI +K+ K Sbjct: 121 EMEATDLLSVCIQHEIDHLLGKLFIDYLSPFKIQRIHKKINKW 163 >UniRef50_C4ZEV9 Peptide deformylase n=9 Tax=Clostridia RepID=DEF_EUBR3 Length = 158 Score = 191 bits (487), Expect = 5e-48, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 3/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D L KV + V EV +I ++DDM ETMY G+GLAA QV I +RI+V Sbjct: 1 MALRTIRVEGDPVLGKVCREVTEVTPKIVTLIDDMLETMYEANGVGLAAPQVGILKRIVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E +V+INPE++E GE +EGCLS+P + V R VK R + D +E Sbjct: 61 IDVGEG---PIVMINPEIIESDGEQTGDEGCLSVPGKAGQVTRPNYVKARFMGEDMNEYE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLS 148 +E + LLA CI HE+DHL G L+++ + Sbjct: 118 IEGEELLARCICHELDHLDGHLYVEKVE 145 >UniRef50_C0Z4W7 Peptide deformylase n=4 Tax=Firmicutes RepID=C0Z4W7_BREBN Length = 171 Score = 191 bits (486), Expect = 7e-48, Method: Composition-based stats. Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 8/174 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGI-GLAATQVDIHQRII 59 M+V Q+L D LRKVAKPVEE+N + +++D+M ET+YA +G GLAA Q+ I +R++ Sbjct: 1 MAVKQILPFGDPILRKVAKPVEELNEKTFKLLDEMAETLYAADGRAGLAAPQIGILRRVV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 V+D + + LINPE++E+SGE E CLS P V RAE VK++ L+R G+ Sbjct: 61 VMDCGDG---LIELINPEIIERSGEQIGMEACLSFPGYYGNVKRAEHVKVKTLNRQGEEM 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSP--LKQQRIRQKVE--KLDRLKARA 169 L DG LA+C+QHE+DHL G LF+D++ L ++ RQKV+ ++ RL +A Sbjct: 118 ILAGDGFLAVCMQHEIDHLDGILFVDHVQEKWLYHEKTRQKVDVLEVIRLTKKA 171 >UniRef50_D1PY14 Peptide deformylase n=2 Tax=Prevotella RepID=D1PY14_9BACT Length = 187 Score = 191 bits (486), Expect = 8e-48, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 101/174 (58%), Gaps = 10/174 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI- 61 +L + LRKVA+ + + +++DDMFETM A G+GLAA Q+ R++VI Sbjct: 2 ILPIYTYGHPVLRKVAQDIPTDYPGLSQLIDDMFETMDASSGVGLAAPQIGKSVRVVVIN 61 Query: 62 ------DVSENRDERLVLINPELLE---KSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 D E D R INP ++E KS + +EEGCLS+P V R +++++ L Sbjct: 62 LDVLKEDYPEYADFRHAYINPHIIEVDKKSEKVSMEEGCLSVPGLSEKVVRYSRIRVQYL 121 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 D + +P + +G LA +QHE DHL G +++D ++PL++Q IR K++ + + K Sbjct: 122 DEELQPHDEWVEGYLARVMQHEFDHLEGVMYVDRITPLRKQLIRNKLKGIMQGK 175 >UniRef50_B3L389 Formylmethionine deformylase, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3L389_PLAKH Length = 242 Score = 191 bits (485), Expect = 9e-48, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 4/168 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+++ PD LRK V + ++ +V MF MY +G+GLAA QV+I RIIV + Sbjct: 66 LKIVLYPDPVLRKKCNEVVNFDDNLRTLVRSMFNVMYESKGMGLAAPQVNISMRIIVWNA 125 Query: 64 ---SENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + ++ V INP ++E S + + EGCLS P+ V R V I D DG Sbjct: 126 LYEKKKKENERVFINPSIVEPSLIRSKLVEGCLSFPDIEGKVDRPRVVSISYYDLDGNKH 185 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 G+ A QHE DHL G LF+D S ++ ++R K+ ++ R Sbjct: 186 LKILKGIHARIFQHEYDHLDGILFIDRFSQSEKHKVRAKLNEMIRTYR 233 >UniRef50_D1C7I8 Peptide deformylase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7I8_SPHTD Length = 177 Score = 191 bits (485), Expect = 9e-48, Method: Composition-based stats. Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 6/156 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL++++ D RLR+ A + +V+ +++R+ DM ETMYA +G+GLA QV + +RIIV Sbjct: 1 MAVLKLVYEGDPRLRQKAVRIRKVDDDLRRLAADMLETMYAADGVGLAGPQVGVMRRIIV 60 Query: 61 IDVS------ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 I V ++ + LINPE++ SG EGCLSIP VPRA V ++A D Sbjct: 61 IGVPAGFENEDDPPIEMALINPEIVRASGRQVGPEGCLSIPNWYGEVPRAMHVTVKARDL 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 D + ++A G LA +QHE+DHL G LF D + Sbjct: 121 DDREIRIKASGGLARILQHEIDHLDGILFTDRVEDK 156 >UniRef50_D0LH18 Peptide deformylase n=2 Tax=Nannocystineae RepID=D0LH18_HALO1 Length = 175 Score = 191 bits (485), Expect = 9e-48, Method: Composition-based stats. Identities = 65/168 (38%), Positives = 107/168 (63%), Gaps = 5/168 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL ++ PD RLR+ + VE+V+ ++ + ++ +TMY+ G+G+AA Q+ ++ + Sbjct: 1 MAVLPIVVWPDARLRQETRRVEQVDDAVRDLYRNLVDTMYSLNGLGIAAVQIGDPTQMFI 60 Query: 61 IDVS----ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ++ + + DE + INPE++ S ++ EEGCLS P V R K ++RAL D Sbjct: 61 VEPALAGRDANDEPVAFINPEVVWTSEDSDKSEEGCLSFPGIYVQVDRPAKARVRALGID 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 G+ FE+EA+GL A C+ HE DHL GKL +D++ PLK+Q IR+K+ + Sbjct: 121 GEIFEVEAEGLFARCLLHENDHLTGKLLVDFVGPLKRQMIRRKLNRQH 168 >UniRef50_D0U631 Peptide deformylase n=2 Tax=uncultured actinobacterium RepID=D0U631_9ACTN Length = 180 Score = 191 bits (485), Expect = 9e-48, Method: Composition-based stats. Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 3/164 (1%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 + D L +A + ++ ++ + +DMF MY G+GLA Q+ + ++I V DV + Sbjct: 12 IRTYGDPVLAAMADEITNIDGKLVTLAEDMFRVMYQAPGLGLAGPQIGVQKQIFVYDVDD 71 Query: 66 NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADG 125 + V+INP+++E SGE +EGCLSIP + R +KV + +G ++EAD Sbjct: 72 D---PQVIINPKIVESSGEWVYDEGCLSIPGLYVEMLRPKKVLVSGFTLEGDEVQIEADE 128 Query: 126 LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LLA QHE+DHL G L D + P +++ + K+ A A Sbjct: 129 LLARLFQHEIDHLQGVLMFDRMLPDQRELAIVEYAKVGDNPANA 172 >UniRef50_Q8NQ46 Peptide deformylase 1 n=8 Tax=Corynebacterium RepID=DEF1_CORGL Length = 169 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 85/169 (50%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V D L A V + + + ++DDMF+TM G+GLAA QV + +R+ V Sbjct: 1 MAVREVRLFGDPVLVSRADEVVDFDESLSTLIDDMFDTMEDAGGVGLAANQVGVLRRVFV 60 Query: 61 IDVSENRDE-RLVLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D S R +INP +EGCLSIP+ A R E V++ DRDG P Sbjct: 61 FDTSHQEGGLRGHVINPVWEPLTEDTQTGKEGCLSIPDVSAETTRYETVRLSGQDRDGNP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 A+GLLA CIQHE DHL G LF+ L P +++ + Sbjct: 121 VGFVANGLLARCIQHETDHLDGVLFLKRLDPAERKAAMGVIRASAWFNK 169 >UniRef50_B3QS23 Peptide deformylase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS23_CHLT3 Length = 202 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 4/172 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L V + + L KVAKP++ V+AE+++ ++DMFETMY +GIGLAA QV R++V Sbjct: 19 MSILPVYTLGEPVLNKVAKPLKGVDAEMKQFIEDMFETMYNADGIGLAAPQVGKSLRLLV 78 Query: 61 IDV----SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 +DV ++ LV+INP++LE G + +EEGCLS+P V R +++ ++ D D Sbjct: 79 VDVSVMEDYQDEKPLVVINPQILETKGLSTMEEGCLSVPGVHEEVTRPKQITLKYRDADF 138 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DG++A +QHE++HL G LF+D L ++ R++++ + + Sbjct: 139 VERVEIYDGMMARVLQHEIEHLQGNLFIDNLDAKTRRLHREELDAIKNGEVE 190 >UniRef50_A5CF65 Peptide deformylase n=18 Tax=cellular organisms RepID=DEF_ORITB Length = 181 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 12/175 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ PD L+KV+ PV+ VN I++++DDM ETMY G+GLAA QV + +RIIV Sbjct: 1 MSILSLVTAPDPILKKVSSPVDTVNDSIRQLIDDMLETMYHNHGVGLAAPQVAVSKRIIV 60 Query: 61 IDVSE-----------NRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 +D+S+ L ++NP + S +T +EGCLS+P+Q V R +++ Sbjct: 61 LDLSKVDIEEDNITNSEYKYPLFMVNPIVKAISNQTVTAKEGCLSLPKQAIEVSRYHEIQ 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 + LD K L A G LA IQHE+DHL G L +DYLS LK++ + K+ Sbjct: 121 VTYLDYYNKLKTLNAAGWLARAIQHEVDHLDGILLVDYLSNLKKEATLNTLSKIK 175 >UniRef50_C7NGP0 Peptide deformylase n=2 Tax=Micrococcineae RepID=C7NGP0_KYTSD Length = 192 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 10/178 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + I + L + K V EV EI+ +V DMF+TM A EG+GLAA QV + RI V Sbjct: 1 MAVRPITIIGHKALHQPTKKVREVTDEIRTLVADMFDTMEAAEGVGLAANQVGVRWRIFV 60 Query: 61 IDVSENR----DERLVLINPELLEKS------GETGIEEGCLSIPEQRALVPRAEKVKIR 110 D + + D R V++NP L ++ EGCLS+P + R++ ++ Sbjct: 61 YDCTHDPEAGPDARGVVVNPVLEKEHVSPLSADPEADHEGCLSVPGESFPTARSDWARVT 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 D DG +E GLL C+QHE DHL G L+++ LSP ++R R +++ R Sbjct: 121 GTDLDGNAISVEGTGLLGRCLQHETDHLDGHLYVERLSPEDKRRARDAIKERGWEDER 178 >UniRef50_Q2J9M0 Peptide deformylase n=1 Tax=Frankia sp. CcI3 RepID=Q2J9M0_FRASC Length = 230 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 43/204 (21%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + + D LR V E + + R+V DM +TMY G+GLAA Q+ + R+ V Sbjct: 1 MTVLPIRTVGDPVLRTPTTLVTEFDTALGRLVTDMIDTMYDAPGVGLAAPQIGVGLRLFV 60 Query: 61 IDVS-----------------------ENRDERLVLINPELLEKSGE------------- 84 DV + P +++SGE Sbjct: 61 FDVDYDPRDESVPRVPRVVVNPVLELGPDPGRPGETQRPGGIQRSGETQRSGETQRSGET 120 Query: 85 -------TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDH 137 EGCLS+P RA ++R +D G+P E +GLLA C QHE+DH Sbjct: 121 QRSGETQQHGPEGCLSVPGLHFPTTRALAARVRGVDVTGQPVEYAGEGLLARCFQHEVDH 180 Query: 138 LVGKLFMDYLSPLKQQRIRQKVEK 161 L G L++D L+ ++ Q + + Sbjct: 181 LDGILYVDRLTGEARRAAVQALRE 204 >UniRef50_Q8NM41 Peptide deformylase 2 n=13 Tax=Actinomycetales RepID=DEF2_CORGL Length = 193 Score = 190 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ D L + V E +E+Q ++ DM+ETM G+GLAA Q+ + +RI V Sbjct: 1 MTVRPIVIHGDPVLHNPTQLVTEDVSELQELIADMYETMDVANGVGLAANQIGVSKRIFV 60 Query: 61 IDVSENRD--ERLVLINPELLEKSGETGI-------EEGCLSIPEQRALVPRAEKVKIRA 111 D ++ + INP L + EEGCLS+P + RA K+ Sbjct: 61 YDCPDDEGVMHKGCFINPVLETSEIPETMPADDGSDEEGCLSVPGEGFPTGRAHWAKVTG 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 L+ G+ +EA+G LA C QHE+ HL G L+ D L ++ ++ ++ Sbjct: 121 LNEKGEEVSVEAEGFLARCFQHEVGHLDGFLYTDVLIGRWKRMAKKAIK 169 >UniRef50_Q6NH22 Peptide deformylase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NH22_CORDI Length = 169 Score = 190 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D L + VE ++ I+ +V+DM ETM A G+GLAA QV + +R+ V Sbjct: 1 MAIRDIRLFGDPVLTTKSSDVEVFDSSIRNLVNDMLETMDAAGGVGLAANQVGVTKRVFV 60 Query: 61 IDVSE-NRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D S R +INP + EGCLSIP+ + R V + D DG P Sbjct: 61 YDCSHIEDGLRGHIINPVWEPIGEDIQIGPEGCLSIPDVQEETERWMTVSVSGRDVDGNP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L A GL+A CIQHE DHL G LF+ L + ++ ++ K + Sbjct: 121 ISLVASGLMARCIQHETDHLDGVLFLRKLDKVHRKDAMAQIRKSEWFNQ 169 >UniRef50_D1VET6 Peptide deformylase n=1 Tax=Frankia sp. EuI1c RepID=D1VET6_9ACTO Length = 205 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 20/183 (10%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL + + D LR A PV + ++R+VDDM ETMYA G+GLAA QV + R+ V Sbjct: 1 MTVLPIRVLGDPVLRTPAGPVTVFDDRLRRLVDDMIETMYAAPGVGLAAPQVGVGLRLFV 60 Query: 61 IDVSENRDER--------------------LVLINPELLEKSGETGIEEGCLSIPEQRAL 100 D + V+ NP L GE +EGCLSIP Sbjct: 61 FDTDWQPNRPDRHEDDAVPEAAGRARGRAPRVVANPVLELGPGEQNDQEGCLSIPGLHYA 120 Query: 101 VPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 RA +R +D G P E GLLA C+QHE DHL G L++D L+ L ++ ++ + Sbjct: 121 TARAAAATVRGVDAAGDPVEYAGTGLLARCLQHEADHLAGTLYVDRLTGLTRRSAQRALR 180 Query: 161 KLD 163 Sbjct: 181 DAA 183 >UniRef50_A6DUA1 Peptide deformylase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUA1_9BACT Length = 197 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 14/175 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V + LRKVA+P+ E+N EI+ +V++M +TMY E GIGLAA QV R+ VID Sbjct: 7 ILDVKKFGNPVLRKVAEPISEINDEIRELVEEMVDTMYEENGIGLAAPQVGRSLRVFVID 66 Query: 63 VSENRDE-------------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVK 108 + L LINPE++ SGE EEGCLSIP+ A V R + Sbjct: 67 THFEDETYGSDGEKLLCPKMPLALINPEIISTSGEDISFEEGCLSIPQINAAVVRPSNIV 126 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 ++A +G+ E + GL + C+QHE+DHL G LF D + + +K+E+L Sbjct: 127 LKAQTLEGEIIEADFGGLTSRCMQHEIDHLDGVLFTDKAEKDDLKLVAKKLEQLR 181 >UniRef50_Q8REF0 Peptide deformylase n=15 Tax=Fusobacterium RepID=DEF_FUSNN Length = 174 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 98/169 (57%), Gaps = 5/169 (2%) Query: 3 VLQVLHIPDERLRKVAKPVE--EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 V ++ ++ L+++AK VE E+N E ++ +DDM ETMY +G+GLAA Q+ + +RI V Sbjct: 2 VYKIKKYGEDVLKQIAKEVELSEINDEFRQFLDDMVETMYETDGVGLAAPQIGVSKRIFV 61 Query: 61 IDVSENRDERLVLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + +INP ++ EEGCLS+P V R ++V ++ L+ GK Sbjct: 62 --CDDGNGVLRKVINPIIVPLTEETQEFEEGCLSVPGIYKKVERPKRVLLKYLNEYGKEV 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 E A+ LA+ +QHE DHL G LF++ +SP+ ++ I +K+ + + R Sbjct: 120 EEIAENFLAVVVQHENDHLDGILFIEKISPMAKRLIAKKLANIKKETKR 168 >UniRef50_B7RJW6 Peptide deformylase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJW6_9RHOB Length = 159 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 4/160 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL ++ PD RL +V +PVE + I +++ DMF+TMYA G GLAA QV +RI V Sbjct: 1 MSVLDIVIWPDARLTQVCQPVEGITPGITQLIADMFDTMYAAPGRGLAAPQVGRSERIFV 60 Query: 61 IDVSENRDERL--VLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D +NPE+++ S G EEGCLSIP + RA +V +R D +G Sbjct: 61 FDAGWKDGAPTPVACVNPEIIDLSEGRLTGEEGCLSIPNTPMDIERAAQVTLRWTDPEG- 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ 157 E G A+ +QHE DHL G + D + ++ + Sbjct: 120 THERTFTGAEAVIVQHEYDHLDGIVIYDRVEKDVKKDTGR 159 >UniRef50_A6C970 Peptide deformylase n=2 Tax=Planctomycetaceae RepID=A6C970_9PLAN Length = 196 Score = 189 bits (480), Expect = 3e-47, Method: Composition-based stats. Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 3/159 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M LQ+++ P LR +KPV+ + E++ IV +MF+ MY GIGLAA QV + R+ V Sbjct: 1 MPALQIVNYPHPALRWKSKPVKSITPELRDIVRNMFDLMYEARGIGLAANQVALPYRLFV 60 Query: 61 IDV---SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 I++ +E V INPE+ ++ G EEGCLS+P+ V R+E++ + A D +G+ Sbjct: 61 INLTSDPNEPEEEFVFINPEITKRKGTAEGEEGCLSLPQVYGDVKRSEEITVEAYDLNGQ 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 FE+ D L A +QHE DH+ G +F D + K+ I Sbjct: 121 LFEITLDDLAARAVQHEHDHIEGIMFPDRMVEAKRNEID 159 >UniRef50_B9L0C1 Peptide deformylase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=DEF_THERP Length = 176 Score = 189 bits (480), Expect = 3e-47, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 6/161 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ D RLR+ A + V+ E++++ D+++T+ A G+GLAA Q+ + +RIIV Sbjct: 1 MAVRTIITEGDPRLRQKAIRIRVVDEEVRQLARDLWDTVRAARGLGLAAPQIGVLRRIIV 60 Query: 61 IDVSEN------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 + + + L LINPE++ SG EGCLSIP VPR+ V ++ALD Sbjct: 61 VAIPPDYVEEGDPGVELTLINPEIVRASGRQVGLEGCLSIPGWYGEVPRSMHVTVKALDL 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 DG+ ++ GLLA +QHE+DHL G LF+D + R Sbjct: 121 DGREVRVKGSGLLARVLQHEIDHLEGILFVDRIEDRSTLRY 161 >UniRef50_C6BVK1 Peptide deformylase n=2 Tax=Desulfovibrio RepID=C6BVK1_DESAD Length = 170 Score = 189 bits (480), Expect = 4e-47, Method: Composition-based stats. Identities = 70/168 (41%), Positives = 105/168 (62%), Gaps = 3/168 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L +L P+E L++V VEEV E++ I+D+M ETMY ++G+GLAA QV + +R+IVID Sbjct: 3 LDILAYPEESLKEVCSRVEEVTPELKEIIDNMIETMYEDDGVGLAAPQVGVQKRLIVIDP 62 Query: 64 --SENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + V+INPE++EKS + EE CLS P + ++ R E V + D +G Sbjct: 63 SGPKERTDLQVIINPEIVEKSSQKVDSEEACLSCPGFKCVIKRHETVTVTGTDPEGNDVR 122 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +EAD LAI +QHE+DHL G L +D + LK+ +KV+K + + Sbjct: 123 IEADDFLAIVLQHEIDHLDGTLIVDRVGRLKRAMYDKKVKKWLKSAGK 170 >UniRef50_A4A7C9 Peptide deformylase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7C9_9GAMM Length = 169 Score = 189 bits (480), Expect = 4e-47, Method: Composition-based stats. Identities = 68/156 (43%), Positives = 100/156 (64%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L ++ +PDERLR+ ++ V + +Q+ V+D+FET+ IGL+A Q I +RIIV Sbjct: 1 MAILDIIEVPDERLREHSEAVSRFDEALQQQVNDLFETLGHSGAIGLSAPQTGIFKRIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + V ++ V INPE+L++S +EE CLS+P V R +VK+RA D GK E Sbjct: 61 VHVPDDDFGARVYINPEILKRSKSRYVEESCLSVPGIEGNVVRCIRVKLRAQDIHGKLCE 120 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 + D L A+C+QHE+DHL G LF D LS K+ R+R Sbjct: 121 FDVDDLHAVCVQHEVDHLDGILFTDRLSWFKKLRLR 156 >UniRef50_Q17XD4 Peptide deformylase n=60 Tax=Epsilonproteobacteria RepID=DEF_HELAH Length = 175 Score = 188 bits (479), Expect = 4e-47, Method: Composition-based stats. Identities = 69/172 (40%), Positives = 107/172 (62%), Gaps = 5/172 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L+++H P + LR ++K V +A+ + +DDM ETM A EGIGLAA QV + R+++ Sbjct: 1 MALLEIIHYPSKILRTISKEVVSFDAKFHQQLDDMHETMIASEGIGLAAIQVGLPLRMLL 60 Query: 61 IDVSENRDERL-----VLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 I++ + +INP+ +E G +EGCLS+P V R EKVKI +R Sbjct: 61 INLPREDGVQHKEDCLEIINPKFIETKGSIMFKEGCLSVPGFYEEVERFEKVKIEYQNRF 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 K LEA LLA+ IQHE+DHL G LF+D LS LK+++ +++++L++ Sbjct: 121 AKVKVLEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELNKNPK 172 >UniRef50_C1A607 Peptide deformylase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A607_GEMAT Length = 196 Score = 188 bits (479), Expect = 5e-47, Method: Composition-based stats. Identities = 72/160 (45%), Positives = 103/160 (64%), Gaps = 3/160 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L + + LR+ + VE V E++R+VD+MF+TM A +G+GLAA QV +R+ V Sbjct: 1 MSLLDIHVLGSPVLRQETQRVESVTPELRRLVDNMFDTMEAAKGVGLAAPQVGRLERLAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +D + RLV+INPE++ + G EEGCLSIPE A V R +V +RA D D +E Sbjct: 61 VDADD---VRLVVINPEIILREGLERGEEGCLSIPEVYADVDRPARVIVRAQDIDLNWYE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 ++A LL C+QHE+DHL GKLF D LS LK++ + + Sbjct: 118 VDAANLLGRCLQHEIDHLFGKLFTDRLSLLKKRSAMKDWD 157 >UniRef50_C8WW76 Peptide deformylase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW76_ALIAD Length = 167 Score = 188 bits (479), Expect = 5e-47, Method: Composition-based stats. Identities = 71/159 (44%), Positives = 99/159 (62%), Gaps = 5/159 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LR+ A+ V + I R++DDM ETMY +GIGLAA Q+ I +R++V Sbjct: 1 MAIRIIRKGEDPVLRQKAQVVTQFTPAIHRLLDDMAETMYDADGIGLAANQIGILKRLVV 60 Query: 61 IDVSENRDER-----LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 IDV D + L+NPE+LE+SG E CLS+P +V RA V++RA +R Sbjct: 61 IDVQPKEDSFQKRAWIELVNPEILERSGVQREREACLSLPGLSGVVERAAYVRVRAQNRY 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 G+ FE+E LLA C+QHE+DHL G LF DYL P + +R Sbjct: 121 GEFFEIEGRDLLARCLQHEIDHLDGILFTDYLRPEEIER 159 >UniRef50_A6Q676 Peptide deformylase n=5 Tax=Epsilonproteobacteria RepID=A6Q676_SULNB Length = 174 Score = 188 bits (478), Expect = 6e-47, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 106/171 (61%), Gaps = 9/171 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ PD+RL+++++ V + + ++DDM+ETM A G+GLAA QV + R ++I+ Sbjct: 2 VREIVIYPDKRLKQISREVGSFDGALHDLLDDMYETMIARNGVGLAAIQVGVDLRALIIN 61 Query: 63 VSENRDE---------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V ++E L +INP ++E G+ +EGCLS+P V RA+ VK+ D Sbjct: 62 VPLEKEEGEHDQPKENTLEMINPVIVEMDGKEKFQEGCLSVPGVYEDVERAKHVKVEYYD 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 R+G+ +E D LAI +QHE+DHL GK+F++ LS LK+++ ++ K + Sbjct: 122 RNGEKHIIEDDDFLAIAMQHEIDHLDGKVFIEKLSFLKRKKFEKEWAKRQK 172 >UniRef50_Q5VNN5 Peptide deformylase 1B, chloroplastic n=3 Tax=Oryza sativa Japonica Group RepID=DEF1B_ORYSJ Length = 269 Score = 188 bits (478), Expect = 7e-47, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 3/169 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+V+ PD LR K + + ++ + D+MF+ MY +GIGL+A QV ++ +++V + Sbjct: 78 LKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP 137 Query: 64 S--ENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + E +VL+NP + + S EEGCLS P A V R + VKI A D G + Sbjct: 138 AGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQDVTGAKIK 197 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 ++ GL A QHE DHL G LF D +S + +R+ ++ L++ + Sbjct: 198 VKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEKKYEES 246 >UniRef50_C9LLK7 Peptide deformylase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK7_9FIRM Length = 161 Score = 188 bits (477), Expect = 7e-47, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 +++ D L+ VA PV + +++ +V++M +TMY G+GLAA Q+ + +R+ V D Sbjct: 10 KIITAGDPILKSVAMPVTAFDKKLKFLVNEMKKTMYESNGVGLAAPQIAVSKRVFVADDG 69 Query: 65 ENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEA 123 E+ E INP E EGCLS+P V R V ++ D GK + +A Sbjct: 70 ESGFE--AYINPRWTPDGDEKVTDTEGCLSVPNWYGEVERYANVTVKYQDIHGKRKQKKA 127 Query: 124 DGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 GLLA CIQHE DHL G LF++ + L + Sbjct: 128 TGLLARCIQHETDHLNGILFIEKANSLHK 156 >UniRef50_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMG4_9BACT Length = 164 Score = 188 bits (477), Expect = 7e-47, Method: Composition-based stats. Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS + PD LR+ K +E + + +++M MY +G+GLAA QV ++ V Sbjct: 1 MSDRTIRIYPDPVLREPTKEIERFDDNFKSFLEEMESLMYEYDGVGLAAPQVGESLKVAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 I + VLINP +++ G +EGCLS P V R V + A D +G+P+ Sbjct: 61 IAY---EGKLHVLINPRIVDYDGRQVDQEGCLSFPGIFEDVARPASVVVEAQDENGEPYS 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 +EA+G LA + HE+DHL GKL +D+LSP+K++ + Sbjct: 118 IEAEGFLARAMCHEIDHLNGKLMIDHLSPMKREMV 152 >UniRef50_B4DC77 Peptide deformylase n=2 Tax=Verrucomicrobia RepID=B4DC77_9BACT Length = 187 Score = 188 bits (477), Expect = 8e-47, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 17/183 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+++ + LR+ + V++V+ +I+++ DM ETM A G+GLAA Q+ + ++ VID Sbjct: 2 ILEIVKYGNPVLREKGREVKDVDEKIKQLSVDMLETMRAANGVGLAAQQIGVPIQMTVID 61 Query: 63 VSE-----------------NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAE 105 V+ LVL+NP L + EGCLS P+ A + R+ Sbjct: 62 VAGIEDRPSAMWINDKEVPIEEHMPLVLLNPVLKFSEEKESGNEGCLSFPDITAEITRSS 121 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 V+ A DGK E EA GLLA +QHE DHL G LF+D ++ + I K+++L + Sbjct: 122 GVQCTATLLDGKKIEFEAAGLLARALQHETDHLHGVLFIDRMNAATKAGISGKLKRLQKE 181 Query: 166 KAR 168 Sbjct: 182 TKE 184 >UniRef50_B9MR36 Peptide deformylase n=97 Tax=Firmicutes RepID=DEF_ANATD Length = 166 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ DE LRK +K VE+ + + +++DDM +TMY GIGLAA QV + +R +V Sbjct: 1 MALRKIRTYEDEILRKKSKVVEKFDQRLCQLLDDMKDTMYEANGIGLAAPQVGVLKRAVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+ E E L+NPE+ + G EGCLS+P V R +KV ++A DR G F Sbjct: 61 IDIGEGAIE---LVNPEIEQVEGSAVDVEGCLSVPNVWGEVERPQKVVVKAQDRFGNEFR 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LEA+GLLA + HE+DHL G LF+D + + E++++ ++R Sbjct: 118 LEAEGLLARAVCHEIDHLDGILFVDKVIRFVSE------EEIEQRRSRG 160 >UniRef50_Q8I372 Formylmethionine deformylase, putative n=2 Tax=Plasmodium RepID=Q8I372_PLAF7 Length = 241 Score = 187 bits (475), Expect = 1e-46, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 4/167 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV- 63 +++ PD LR+ ++ V + ++R+V MF+ MY +GIGL+A QV+I +RIIV + Sbjct: 66 KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNAL 125 Query: 64 --SENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + INP ++E+S + + EGCLS P V R V I D +G Sbjct: 126 YEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHL 185 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 G+ + QHE DHL G LF+D ++ + ++++R K+ +L R Sbjct: 186 KILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYK 232 >UniRef50_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWW4_HALHL Length = 162 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 70/155 (45%), Positives = 96/155 (61%), Gaps = 1/155 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++L PD RLR+ + PVE + + +VDDM ETM+A IGLAA QVD+ QRI V Sbjct: 1 MATLEILEHPDPRLRQPSAPVERFDQALCELVDDMIETMHARSAIGLAAPQVDVRQRI-V 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + +E V INPE+ S IEE CLS+P Q+ LV R +V +RA D G+ F Sbjct: 60 VCCTEPAQAPRVFINPEITGSSLPGYIEESCLSVPGQQGLVRRPTRVSVRAQDTAGERFH 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRI 155 + + L A+C+ HE+DHL G LF+D L K+ +I Sbjct: 120 CKLENLDAVCLHHEIDHLDGTLFIDRLPFWKRLKI 154 >UniRef50_A8ZUK5 Peptide deformylase n=2 Tax=Desulfobacteraceae RepID=DEF_DESOH Length = 173 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 72/168 (42%), Positives = 116/168 (69%), Gaps = 3/168 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+VL ++ P + L+ A PV ++ ++Q+++DDM +TMYA +G+GLAA QVD R+++ Sbjct: 1 MTVLDIVTYPADVLKDGALPVANIDGKLQQLIDDMAQTMYAHQGVGLAAVQVDSGLRLVI 60 Query: 61 IDVSENRDER--LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 DVS+ R+++ V+INPE++ GE +EGCLS+PE R V RA V++ +DR+G+ Sbjct: 61 YDVSDQREKQQFRVVINPEVVAVDGECVSEQEGCLSVPELRTDVKRAATVRVEGVDREGR 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 P ++A+GL AI +QHE+DHL G L +D S LK++ ++KV+K + Sbjct: 121 PLVIDAEGLEAIVLQHEIDHLNGTLILDRASRLKRELYKRKVQKRIKQ 168 >UniRef50_B0VID6 Peptide deformylase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VID6_9BACT Length = 186 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 4/171 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L V D+ LRK ++ + ++D+ TMYA +GIG+AA QV R+IVID Sbjct: 7 ILPVRLYGDDFLRKKLPEIDYNTPGLPEFIEDLIYTMYARDGIGIAANQVGSFYRMIVID 66 Query: 63 VSEN----RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 ++ + +V+INP + K GE EEGC+S+P+ A V R++K+ DR G Sbjct: 67 PEQDNKLNKKSPIVMINPVIENKEGEVVYEEGCISLPDIFADVSRSKKITYSYTDRMGNR 126 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 A+ + A+ IQHE DHL G LF+D+L L + +I K++KL Sbjct: 127 ITETAEEIKAVVIQHEFDHLEGILFIDHLGTLDRLKIMHKLKKLQARAVNG 177 >UniRef50_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UN70_AKKM8 Length = 182 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 17/178 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L++ + L++ +PVE + ++ + ++M ETMYA EGIGLAA QV I +++VID Sbjct: 2 LLEIAQYGNPVLKEKCRPVEHFDDSLKTLAENMLETMYAAEGIGLAAPQVSIPIQLVVID 61 Query: 63 VSENRDE-----------------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAE 105 + + + L+ NP L EGCLS+ + RA V R + Sbjct: 62 IPKEEESVTWLKVNGEDKELSDIMPLMFANPVLEPYGPMHPFHEGCLSVMKIRASVVRPD 121 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 VK L DG+ ++ +GLLA C+QHE DHL G LF++ +S ++ +R K+++L Sbjct: 122 FVKATVLLIDGREITIDCNGLLARCLQHECDHLNGILFVERVSSAQKITLRNKLKRLA 179 >UniRef50_C0WD89 Peptide deformylase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD89_9FIRM Length = 164 Score = 186 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 1/154 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L ++ + LR+ A+ V + ++++ + M E+MYA G GLAA Q+ + +R+IV Sbjct: 9 MSLLPIVKVGAPILREKAEAVTRFDKKLEKTLKAMAESMYANNGCGLAAPQIGLSKRMIV 68 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID + R +NP L E GE EGCLS+ + V RA +V +R DR G + Sbjct: 69 IDADDGAGIRE-FVNPVLSEFKGEEIDTEGCLSVDDYEGEVKRAAEVTVRFQDRKGGHWR 127 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 L A GLLA +QHE DHL G LF+D L +R Sbjct: 128 LTASGLLARALQHECDHLDGILFIDRALSLSPKR 161 >UniRef50_B9XGP3 Peptide deformylase n=1 Tax=bacterium Ellin514 RepID=B9XGP3_9BACT Length = 191 Score = 186 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 70/184 (38%), Positives = 96/184 (52%), Gaps = 18/184 (9%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS L+V+ LRK + V V +EI++ + DMFETMY GIGLAA QV +I V Sbjct: 1 MS-LKVIKYGHPVLRKKGEKVTRVTSEIKQFIKDMFETMYESRGIGLAAQQVARAVQITV 59 Query: 61 IDVSE-----------------NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPR 103 IDV + LVLINPE+ + EGCLS PE A + R Sbjct: 60 IDVRGITDRPSTLELNGKPASVEKFMPLVLINPEVKPVGPKVAGTEGCLSFPEIFAEITR 119 Query: 104 AEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E V + A++ +G+ E A GLLA +QHE DHL G LF+D + +Q ++ ++E+L Sbjct: 120 PETVDVVAMNENGERIEFRAGGLLARAVQHETDHLNGILFIDRMDTETKQELKPELEELQ 179 Query: 164 RLKA 167 Sbjct: 180 ARTK 183 >UniRef50_Q2GE16 Peptide deformylase n=8 Tax=Rickettsiales RepID=DEF_NEOSM Length = 186 Score = 186 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 16/185 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L ++ PD L +V++ V ++ E + +DDM ETMY GIGLAA QV + +RIIV Sbjct: 1 MALLALIIEPDPLLHEVSEAVAGLSDEKRVFLDDMLETMYHCGGIGLAAVQVGVLERIIV 60 Query: 61 IDVS---------------ENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRA 104 +DV ++ +NPE++E S +EGCLS+PEQ + R Sbjct: 61 VDVPVGKEWHSSPLNHVGYKSSGGPYYFVNPEIIEFSQNLVPADEGCLSLPEQHYEIIRP 120 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 + V ++ L+ DG+ L+A+G LA CIQHEMDHL G+L++ +LS LK +K ++ + Sbjct: 121 DAVVVKYLNYDGEECLLKANGWLARCIQHEMDHLNGRLYVSHLSKLKHDLAIKKAAEIKK 180 Query: 165 LKARA 169 + A Sbjct: 181 RHSEA 185 >UniRef50_B2KD65 Peptide deformylase n=1 Tax=Elusimicrobium minutum Pei191 RepID=DEF_ELUMP Length = 176 Score = 185 bits (470), Expect = 6e-46, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 103/176 (58%), Gaps = 9/176 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVE--EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 M+V +++ ++ LR+ KPV+ + ++ I+ DM +T + +G GL+A Q+ + RI Sbjct: 1 MAVRRIVKYGEDILRQKLKPVDFKTLEPQLDAILQDMHDTCMSFQGAGLSANQIGLTHRI 60 Query: 59 IVIDVSEN-------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRA 111 +I + E + +R V+INP ++ K G EEGCLS+P + RAE + + Sbjct: 61 AMIFIPEKTPKGEAQKFKRYVVINPVIVSKKGCVTDEEGCLSLPGLWVEIERAESIVVHC 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 L+ G P E+ A G LA +QHE+DHL GK+F+D+ P + I+++++KL + + Sbjct: 121 LNEKGLPVEIHAKGFLAKALQHEIDHLDGKIFIDHADPKLKPEIKKELKKLSKNWS 176 >UniRef50_Q8G487 Peptide deformylase 2 n=33 Tax=Bacteria RepID=DEF2_BIFLO Length = 162 Score = 185 bits (469), Expect = 6e-46, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 3/163 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +PD LR ++E+ ++R+VDD+ ET+ GL+A Q+ + R Sbjct: 1 MAIREIRVVPDPVLRTPCDEIKEITPAVRRLVDDLLETVDDPGRAGLSANQIGVSLRAFS 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ ++NP L EKSGE +EGCLS+P RA+ ++R +D DG Sbjct: 61 YNIDGKVGY---VLNPVLEEKSGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGNEVV 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 LE GL+ +QHE DHL G +++D L +++ + + Sbjct: 118 LEGSGLMGRMLQHECDHLDGHVYLDRLEKEERREALRYMRNRQ 160 >UniRef50_B0PFT9 Peptide deformylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT9_9FIRM Length = 155 Score = 185 bits (469), Expect = 7e-46, Method: Composition-based stats. Identities = 69/150 (46%), Positives = 101/150 (67%), Gaps = 4/150 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L DERLRK ++PV + N + ++DDM+ETM G+G+AA QV + +R +V Sbjct: 1 MALRNILKEGDERLRKKSRPVTDFNERLWTLLDDMYETMKD-GGVGIAAPQVGVLRRAVV 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E + E L+NP ++E+SG+ EGCLSIP Q LV R +++++A DR GKPFE Sbjct: 60 IDVGEGKHE---LVNPVIVEQSGDQCGGEGCLSIPGQYGLVHRPAQLRLKAQDRYGKPFE 116 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 LEA+G A+ + HE+DHL G LF+D + Sbjct: 117 LEAEGYFAVAVCHEVDHLDGILFIDKAERM 146 >UniRef50_C8PRC6 Peptide deformylase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRC6_9SPIO Length = 173 Score = 185 bits (469), Expect = 7e-46, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 3/166 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++VL++ +E LR+ +KPVE ++ + ++ +MF TM + GIGLAA Q+ + R+ ++ + Sbjct: 1 MKVLYLGEETLRQPSKPVEHIDEALHELIREMFITMDEDNGIGLAAPQIGKNVRLFIVKI 60 Query: 64 SENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + V INP ++ S + EEGCLSIP+ A V R E V ++ D +G+ +E Sbjct: 61 DD--GIERVFINPLIVGTSEKQCSYEEGCLSIPKMFADVVRPEAVTVQYQDMNGRRRTIE 118 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A GLLA IQHE DHL G LF+D LS ++ + K + K + Sbjct: 119 ATGLLARVIQHEYDHLEGVLFIDRLSEKERDSLVAKFTQQQERKKQ 164 >UniRef50_C6V4P2 Peptide deformylase n=1 Tax=Neorickettsia risticii str. Illinois RepID=C6V4P2_NEORI Length = 205 Score = 185 bits (469), Expect = 8e-46, Method: Composition-based stats. Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 16/170 (9%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L+++ PD L KV+ V V+ E + +DDM ETMY GIGLAA QV + +RIIV Sbjct: 21 MALLKLVIEPDPILHKVSGNVVGVSDEKREFLDDMLETMYHYTGIGLAAVQVGVLERIIV 80 Query: 61 IDVSENR---------------DERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRA 104 +DV ++ L+NPE++E S +EGCLS+PEQ + R Sbjct: 81 VDVPPDKEWHSSPLNHVGYESSGGPYYLVNPEIIEFSRNLVSADEGCLSLPEQNYEIVRP 140 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQR 154 + V ++ L+ +G+ L+A+G LA CIQHE+DHL GKL++ +LS LK Sbjct: 141 DAVVVKYLNYNGEECLLKANGWLARCIQHEVDHLDGKLYVSHLSKLKYDL 190 >UniRef50_D0WE84 Peptide deformylase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WE84_9ACTN Length = 187 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 3/156 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+VL PD LR+V + + + ++++ M +TMYA+ G GLAA QV + +R+IVID Sbjct: 11 LEVLAYPDPTLRQVCEDCDPADKSLRKLARRMAKTMYADNGCGLAAPQVGVLKRLIVIDC 70 Query: 64 SENRD--ERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ + L+NP ++E G E EEGCLS+P + R +R D +G+ + Sbjct: 71 DQDSGAKNPITLLNPTVIETRGPEVVEEEGCLSVPGITVPIRRPAYAIVRYTDLNGEDWI 130 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 +E DGLLA C+QHE+DHL G + ++ + Sbjct: 131 IEGDGLLARCLQHEIDHLNGITLFESCDLNERIKAM 166 >UniRef50_A0Q456 Peptide deformylase n=18 Tax=Francisella RepID=A0Q456_FRATN Length = 174 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 74/173 (42%), Positives = 110/173 (63%), Gaps = 5/173 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRI 58 MS L++L P L++VAK V +E+N +++ + +M E M G+GLAA QV I +R Sbjct: 3 MS-LEILKYPHPVLKEVAKEVTKDEINDDLRATIAEMHELMLEANGVGLAAIQVGIKKRF 61 Query: 59 IVI--DVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 ++ ++ E + + +INPE++E+SG+ EEGCLS P A V RA VKI+AL+ G Sbjct: 62 FIMYDNLEEQNPKIITIINPEIIEQSGKIIDEEGCLSFPGVSAKVNRATTVKIKALNEFG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 E+E DG LA CIQHE+DHL G F D+L LK++ I +K +KL + A++ Sbjct: 122 DEIEIEKDGFLARCIQHEIDHLNGITFFDHLGSLKRKMIEKKYKKLMQENAKS 174 >UniRef50_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola RepID=Q73M64_TREDE Length = 169 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 73/166 (43%), Positives = 108/166 (65%), Gaps = 4/166 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++VL++ +E LR+V+KPVE+++ I+ ++D+MF T+ E GIGLAA QV + R+ ++ + Sbjct: 1 MKVLYLGEETLREVSKPVEKIDENIKSLIDEMFVTVKKENGIGLAAPQVGENIRLFIVFI 60 Query: 64 SENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 +E + V INPE++E S E +EEGCLSIP+ V R VK++ L+ DGK +E Sbjct: 61 NEQK---YVFINPEIIETSQEMCLMEEGCLSIPKVYDEVMRPSAVKVQFLNIDGKIKTIE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A GLLA IQHE DHL G LF+D LS K+ +K E L ++ Sbjct: 118 ASGLLARVIQHENDHLNGILFIDRLSEEKKAEAIEKFEHKKALFSK 163 >UniRef50_A3DCX4 Peptide deformylase n=24 Tax=Clostridia RepID=DEF_CLOTH Length = 170 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 3/147 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V + DE LRKV+K V+ ++ I+ ++DDM ETMYA G+GLAA QV + +R++V Sbjct: 1 MAVRFIREDGDEILRKVSKKVDVIDERIKTLLDDMAETMYAANGVGLAAPQVGVLKRVVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV + + LINPE++E+ GE EGCLSIP V R +V + AL+R+G+ Sbjct: 61 IDVGDG---LMELINPEIVEQEGEQIDIEGCLSIPGVAGEVKRPARVVVEALNREGEKIT 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +E LLA+ + HE+DHL G LF D + Sbjct: 118 VEGKELLAVALCHEIDHLDGILFTDKV 144 >UniRef50_C0ZE47 Peptide deformylase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE47_BREBN Length = 175 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 4/162 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGI-GLAATQVDIHQRII 59 M+ ++ + D LR+ +K V+ + ++++I+DDM +T+YA +G GL+A Q+ I +R++ Sbjct: 1 MAERMIVRLGDPILRETSKRVQSITPQVEKILDDMVQTIYAAKGRAGLSAIQIGIPKRLV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 V+D + LINP L+EKSGE +E CLSIP +V RA VK++ L+R G+ Sbjct: 61 VMDCG---SGLIELINPVLMEKSGEQVGQEACLSIPGVFGIVRRANYVKVQTLNRQGETK 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 +EA+ LA CIQHEMDHL G LF+D+ L + +K+ + Sbjct: 118 TIEAEDFLARCIQHEMDHLEGILFIDHTEELYSAKTGKKLNR 159 >UniRef50_B9ZK41 Peptide deformylase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZK41_9GAMM Length = 178 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 MSV ++L + LR+V PV E + + +VDD+ +TM+A EG+GLAA Q+ + R Sbjct: 1 MSVRRILRMGHPDLRRVCDPVPESDFDSPGLHALVDDLVDTMHASEGLGLAAAQIGVPHR 60 Query: 58 IIVIDVSEN--------RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVK 108 + VI++ RL L+NP + EGCLS+P R V R + Sbjct: 61 VAVIEIQPGNTRYPGAVPTGRLALVNPVVTVLDPTPQRYWEGCLSVPGLRGEVARPRHIA 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 + + DG P LE +G LA QHE+DHL G LF+D ++ + + + Sbjct: 121 VDYHEPDGTPRHLEPEGFLATVFQHEIDHLDGTLFIDRVTDTTRLAFLDEYREFHAQ 177 >UniRef50_A4RVA1 Peptide deformylase, organellar n=2 Tax=Eukaryota RepID=A4RVA1_OSTLU Length = 240 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 3/160 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + P + LR PVE + ++R+ MF+ MY G GLAA QV ++ R++V + Sbjct: 66 LAIAKYPAKCLRAKNAPVETFDKNLERLSKAMFKIMYETVGCGLAAPQVGVNYRMMVYNE 125 Query: 64 SENRDE--RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + +VL NPE+++ S E EEGCLS P+ A V R V+I A + GK F+ Sbjct: 126 AGEPGQGREVVLCNPEIVKFSKEKDLFEEGCLSFPKMYADVERPIGVQIEAQNLKGKKFK 185 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 + +G A QHE DHL G L+ D +SP + ++ ++ Sbjct: 186 MTLEGFEARVFQHEYDHLDGVLYHDRMSPEVRASVQSTLD 225 >UniRef50_B5EMH5 Peptide deformylase n=4 Tax=Proteobacteria RepID=B5EMH5_ACIF5 Length = 167 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 5/163 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M+VL +L PD RL++ A PV + ++ +DD+ ETMYA G +G+AA QVD QRI+ Sbjct: 1 MAVLPILTYPDSRLQRKADPVSVFDDDLHHFIDDLTETMYAGPGGVGIAAPQVDRAQRIV 60 Query: 60 VIDV----SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 ++DV ++ +VLINPEL G EGC+S+P+ V RAE+++++A D Sbjct: 61 IVDVRPKLGDDCHGLMVLINPELAAWEGMVVGREGCMSVPDFTGNVIRAERIQVQAQDVL 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 G+ E +G A +QHEMDHL G LF+D L K R+K Sbjct: 121 GRERSYECEGFEARAVQHEMDHLDGLLFLDRLVSRKVDLFRRK 163 >UniRef50_A3EQF2 Peptide deformylase n=3 Tax=Leptospirillum RepID=A3EQF2_9BACT Length = 184 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 14/180 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++L++ + + LRK+A+P+ E Q VDDM ETM +G+GLAA QV + ++ Sbjct: 1 MALLKIAKMGNPILRKIAEPISPKEIETDEFQTFVDDMIETMRDSDGLGLAAPQVHVSKQ 60 Query: 58 IIVIDVSENRDER-------LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKI 109 ++VI+ EN LVLINP S ET EGCLS+ R V R+ VK+ Sbjct: 61 VVVIESMENDRYPDAPPIPLLVLINPVFKYMSKETRTGWEGCLSVDNLRGKVTRSRAVKM 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 ALDR G LE + A+ +QHE DHL G LF+D + + ++E+ + R Sbjct: 121 EALDRHGNTITLEWEDFPAVVLQHETDHLRGHLFLDRMKDM---STLTQLEEFQKFWVRG 177 >UniRef50_C8W757 Peptide deformylase n=2 Tax=Atopobium RepID=C8W757_ATOPD Length = 180 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 4/168 (2%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV- 63 ++ PD RL + + ++++N +++++ + M + MYA +G+GLA Q+ +R++VIDV Sbjct: 7 DMVLWPDPRLSQKCEEIDDINDDVRKMAEHMLKVMYATDGVGLAGPQIGYMKRMVVIDVD 66 Query: 64 -SENRDERLVLINPEL-LEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 ++ VLINPE+ + EEGCLS P V R V + A + DG Sbjct: 67 YPNGQENPFVLINPEIKVADGEPRVYEEGCLSFPGITVPVTRPSHVVVHAYNLDGDLMRY 126 Query: 122 EADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 EA+G L A+C+QHE+DH+ G D+L P + ++ ++ AR Sbjct: 127 EAEGDLFAVCLQHEIDHINGVTMPDHLGPGARMETLREYKEALASGAR 174 >UniRef50_D1VSE6 Peptide deformylase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE6_9FIRM Length = 166 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LRK +K VE N ++ +VDDMFETM + +G+GLAA QV + +R+IV Sbjct: 1 MAIRNIRTDEDTILRKKSKTVENFNDRLKVLVDDMFETMDSADGVGLAAPQVGMLKRLIV 60 Query: 61 IDVSENRD-ERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D + + R LINP + K G EGCLSIP ++ V RA + + DGK Sbjct: 61 VDDRDEENQHRFYLINPVITRKEGSEVCREGCLSIPGKQGDVKRATDIDVTYNTLDGKEE 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 ++ LA IQHE+DHL G L+ D + + I QK + L+ L Sbjct: 121 KINCKDFLARIIQHEIDHLDGILYTDRAEKMYR--IVQKDDNLEEL 164 >UniRef50_D2PNQ8 Peptide deformylase n=2 Tax=Propionibacterineae RepID=D2PNQ8_9ACTO Length = 201 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 6/168 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 SVL + ++ + +V +PV + ++ ++V DM TM A EG+GLAA QV + ++ V Sbjct: 9 SVLPITRWGEDVMHRVNQPVTDFGDDLHKLVADMVATMNAAEGVGLAANQVGVDLQLFVF 68 Query: 62 DVSENRDERL--VLINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D + R V+ NP+L G+ EEGCLS+P R + K+ +D Sbjct: 69 DCPDRDGVRHQGVVCNPKLELPEGKDRHLDEGEEGCLSLPGAFTKCARPDYAKVTGVDEH 128 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 G P E +GLLA C+QHE DH G +F D LS ++R+ + E+L Sbjct: 129 GNPVSYEGNGLLARCLQHETDHTQGMVFGDRLSRKYKKRLFAEAEELA 176 >UniRef50_Q0BUX2 Peptide deformylase n=11 Tax=Alphaproteobacteria RepID=Q0BUX2_GRABC Length = 209 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 6/165 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVN-AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 MS+L++ + L + A PV + EIQR+ DM ETM G+GLAA QV R+ Sbjct: 29 MSILKIARMGHPVLLRRADPVPDPTAPEIQRLALDMIETMIDAPGVGLAAPQVYQSLRMF 88 Query: 60 VIDVS----ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDR 114 V V VLINPEL E + EGCLSIP R VPRA +V+ R + Sbjct: 89 VFRVPVSRGGEEVSPTVLINPELEWVGDEIQMCWEGCLSIPGFRGEVPRAMRVRYRGIGL 148 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 DG E EA G A IQHE DHL G L+ ++ L + +++ Sbjct: 149 DGAVIEREASGFHANVIQHEYDHLDGILYPMRMNDLGRLGFEEEI 193 >UniRef50_B3DUG9 Peptide deformylase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DEF_METI4 Length = 190 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 69/181 (38%), Positives = 107/181 (59%), Gaps = 16/181 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L+++ + LRK P++ + ++R+V DM ETM +G+GLAA QV ++ ++ VID Sbjct: 2 ILKLVLYDNPILRKKGMPIDSFDDRLKRLVQDMLETMAYYKGVGLAAQQVGLNLQLAVID 61 Query: 63 VSE----------------NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEK 106 VS L LINP L + EGCLS P R VPR+++ Sbjct: 62 VSGSKLSSSLLIGGKPAMVEEHMPLFLINPTLSYTQSKEISNEGCLSFPGLRIDVPRSKR 121 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 VK++ D +G+P+ EA G L++ IQHE DHL GKLF+DYLS +++ I++++EK+ R + Sbjct: 122 VKVKTFDLEGRPWYFEAGGFLSVAIQHEFDHLQGKLFIDYLSAEQKKAIKEELEKIKRGE 181 Query: 167 A 167 A Sbjct: 182 A 182 >UniRef50_Q8UF49 Peptide deformylase-like n=19 Tax=Rhizobiales RepID=DEFL_AGRT5 Length = 164 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 3/164 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L P L + PV + ++ +V D+ +TM A G+G+ A + + QR+ V Sbjct: 1 MAIRPILPYPHAGLSGICAPVTVFDDHLRELVTDLIDTMRAAPGVGITAAHIGVLQRVFV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++++ L INPE+ S +T EG +S+P V R V++R D G Sbjct: 61 LELTP--GTILTYINPEITSHSPQTMRHVEGSVSMPGFTDEVERPSTVEVRFQDITGAEQ 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 A+G AICIQHE+D L G ++ LS LK+ R+ +K EK Sbjct: 119 TETAEGFHAICIQHEIDQLDGIFWLKRLSRLKRDRLVKKWEKSR 162 >UniRef50_Q9FCA2 Peptide deformylase 2 n=4 Tax=Streptomyces RepID=DEF2_STRCO Length = 179 Score = 183 bits (464), Expect = 3e-45, Method: Composition-based stats. Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 3/167 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V + + D L V + E+ +V+D+F TMYA G+GLAA QV R+ V D Sbjct: 13 VRPLGLLGDPVLHARCAEVTDFGPELAALVEDLFATMYAAHGVGLAANQVGEAVRVFVYD 72 Query: 63 VSENRDERLV--LINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ DER + ++NP L+E G EGCLS+P A R ++ + G+P Sbjct: 73 CPDDEDERHLGHVVNPRLVETGGVVVRGPEGCLSLPGLEAGTERYDEAVVTGFTVAGEPV 132 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 + G A C+QHE DHL G+++ D L+ + +++ ++V + + Sbjct: 133 TVRGTGFFARCLQHECDHLEGRVYADRLTGRRHRKLMRQVARASWHR 179 >UniRef50_Q1CVW8 Peptide deformylase n=2 Tax=Cystobacterineae RepID=Q1CVW8_MYXXD Length = 168 Score = 182 bits (463), Expect = 4e-45, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 3/168 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ ++ P + L KPV + ++ +++ M E+M EGIG+AA QV R+ + Sbjct: 1 MA-RDIVIWPHKVLTSSTKPVTDFGPPLETLLEQMAESMKEAEGIGIAANQVGESLRVAL 59 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + ++NP++LEK +EEGCLS+P + PR KVK+R D+ + E Sbjct: 60 V--GREDGTFFEIVNPQILEKKEPVTMEEGCLSVPREWEKCPRFHKVKVRYQDKSAEWHE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LEA+G LA +QHE+DHL G +F+D+LS LK+ I +++KL ++KAR Sbjct: 118 LEAEGRLAHVLQHEIDHLDGHVFVDHLSSLKRTLILDRMKKLQKVKAR 165 >UniRef50_A8U9S1 Peptide deformylase n=14 Tax=Lactobacillales RepID=A8U9S1_9LACT Length = 164 Score = 182 bits (463), Expect = 4e-45, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 1/147 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSVL +L PD L K V E+ EI ++++DM+ETM A +GIG+AA QV+ + R+ + Sbjct: 1 MSVLPILKYPDPMLITPTKEVTEITDEIVQLLEDMYETMVANDGIGIAAPQVNSNLRLAI 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ E +INP ++ +GET EGCLS PE + RA+ + +R DR+G FE Sbjct: 61 VEIDEESG-LYEMINPRIVHATGETIDVEGCLSFPEVFGTIKRADTIVLRYYDRNGDEFE 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYL 147 +EAD L+ QHE++HL GKLF D + Sbjct: 120 VEADDYLSRAFQHELEHLDGKLFTDKI 146 >UniRef50_Q0RM09 Peptide deformylase n=4 Tax=Actinomycetales RepID=Q0RM09_FRAAA Length = 190 Score = 182 bits (463), Expect = 4e-45, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 8/167 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + + D LR V +A + R+V DM +TMY G+GLAA Q+ + R+ V D Sbjct: 1 MLPIRTVGDPVLRTPTALVTTFDAALARLVHDMIDTMYDAPGVGLAAPQIGVGLRVFVFD 60 Query: 63 VSENRDERLVLINP--------ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 V + + V P EL + +EGCLS+P RA + +R +D Sbjct: 61 VGYDPRDVTVPRVPRVVVNPVLELAADGEQQEGQEGCLSVPGLHFSTTRALRASVRGVDV 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G E +GLLA C QHE+DHL G L++D L+ +++ Q + + Sbjct: 121 TGAAVEYAGEGLLARCFQHEVDHLDGTLYLDRLTGEERRAAVQALRE 167 >UniRef50_B5YF46 Peptide deformylase n=2 Tax=Dictyoglomus RepID=DEF_DICT6 Length = 153 Score = 182 bits (462), Expect = 4e-45, Method: Composition-based stats. Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 3/155 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ + D L+ AK VE+++ +++ + DM ETM G+GLAA QV RIIV+D Sbjct: 2 IREIRKVGDPILKTKAKKVEKIDEKVKELARDMIETMKFCNGVGLAAPQVGESLRIIVVD 61 Query: 63 VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 +N +VLINPE++E SGE EGCLS+P V RAE++ +A D DG+ + Sbjct: 62 YEDN---PIVLINPEIIEMSGEELDYEGCLSVPGVEVPVKRAERIVFKAQDLDGRTKKYR 118 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ 157 A GLLA +QHE+DHL G L +D + + Sbjct: 119 AKGLLARVVQHEVDHLDGMLILDRAVEETLKTEEK 153 >UniRef50_Q1AVZ8 Peptide deformylase n=2 Tax=Bacteria RepID=Q1AVZ8_RUBXD Length = 164 Score = 182 bits (462), Expect = 4e-45, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 5/163 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++ D L+ A PV+ + + R+ ++MFETM EG+GLAA QV +RI V Sbjct: 1 MA-LEMRTFGDPVLKSRAAPVKTFDGALARLAEEMFETMREHEGVGLAANQVGRLKRIFV 59 Query: 61 IDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +V D RLV++NP + E S T EEGCLSIP R V R V + + DG P Sbjct: 60 AEV---EDRRLVVVNPAIEEASERTERAEEGCLSIPGVRVEVERPAAVVLTGQNLDGSPL 116 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 +EA+GLLA +QHE DHL G L +D + ++ +++ + Sbjct: 117 RIEAEGLLARVLQHETDHLDGVLILDRVDRETRRAALRELRER 159 >UniRef50_A5FGV5 Peptide deformylase n=59 Tax=cellular organisms RepID=DEF_FLAJ1 Length = 196 Score = 182 bits (462), Expect = 4e-45, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 15/179 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L ++ D LRKV + ++ + +M+ETMY G+GLAA QV + RI VID Sbjct: 2 ILPIVGYGDPVLRKVGTAITPDYPNLKETIANMYETMYNAYGVGLAAPQVGLPIRIFVID 61 Query: 63 VS--------------ENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKV 107 + + + + IN +++++ GE EGCLSIP+ R V R V Sbjct: 62 TTPFSDDEDLPADEQKDLKGFKRTFINAKIVKEEGEEWSFNEGCLSIPDVREDVYRKPTV 121 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 I + D DGL+A IQHE DH+ G LF D +S LK++ I++K++ + K Sbjct: 122 TIEYCEEDFVMKTEVFDGLIARVIQHEYDHIEGVLFTDKISSLKKRLIQKKLKNITEGK 180 >UniRef50_A9DWU1 Peptide deformylase n=2 Tax=Rhodobacteraceae RepID=A9DWU1_9RHOB Length = 165 Score = 181 bits (461), Expect = 5e-45, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 3/163 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ +VL PD RL ++ P+EE+ EI+++ DM ETMYA G GLA QV R+ V Sbjct: 1 MSMREVLRWPDPRLAEICAPIEEITPEIEQLAADMLETMYAAPGRGLAGPQVGAMLRLFV 60 Query: 61 IDVS--ENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +D EN+ + LV INP E E EGCLSIP + R +V++ +G Sbjct: 61 MDAGWKENKSDPLVCINPMFQEIGEERVTNTEGCLSIPGISTDISRPSQVQMVWTGLNGG 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 + +G A+ QHEMDHL G + D+L + + + Sbjct: 121 RYVQSFEGAAALIAQHEMDHLDGVVTFDHLDAETRAAKIAEFK 163 >UniRef50_Q6MD22 Peptide deformylase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD22_PARUW Length = 176 Score = 181 bits (461), Expect = 6e-45, Method: Composition-based stats. Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 8/173 (4%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + + D LRK + E+N I+++V DM ETM A +G GLAA QV + + + Sbjct: 3 LPLAYYGDSVLRKKGSQIAEINDTIKQLVQDMIETMEANDGCGLAAPQVHQSLSLFITCI 62 Query: 64 SEN-------RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 + + V INP++L S E +E CLSIP R V R KV I+A D + Sbjct: 63 PQYLENDQVIPGQVRVFINPKILSYSQEVWACQEACLSIPGMRETVSRPLKVTIQATDLN 122 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 G F E G A I HE DH+ G L++D L +++ I + + ++ + ++ Sbjct: 123 GHTFTEEFAGFDAHVIMHENDHVNGVLYIDRLPSKRKKGIEKFLREIKKKYSK 175 >UniRef50_A6TRW8 Peptide deformylase n=4 Tax=Clostridiales RepID=DEF_ALKMQ Length = 147 Score = 181 bits (461), Expect = 6e-45, Method: Composition-based stats. Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 3/150 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ + D LRK ++ V+++++ I ++DDM ETMY +G+GLAA QV I +++IV Sbjct: 1 MAIRLIRTDDDPVLRKKSRVVDKIDSRIHTLLDDMIETMYEADGVGLAAPQVGILKQVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 IDV E E LINPE+++++G EGCLS+P V R VK+R L+R GK E Sbjct: 61 IDVGEGVIE---LINPEIIKETGSQCDVEGCLSLPGHSGEVERPAIVKVRGLNRQGKMVE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 ++ LLA + HE+DHL G LF D + Sbjct: 118 IQGTELLARALCHEIDHLNGILFTDKIIKE 147 >UniRef50_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula baltica RepID=DEF_RHOBA Length = 201 Score = 181 bits (461), Expect = 7e-45, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 2/162 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L ++H P LR V++P+ V+A+++ + D+M + MY +G+GLAA QVD+ R+ V + Sbjct: 3 LSIIHFPHPTLRHVSRPIVRVDAKLKSMADEMLDLMYEFDGVGLAANQVDLPIRMFVANP 62 Query: 64 SE--NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + + E V++NPE+ G +EGCLS+P V R + V++R D G Sbjct: 63 TGKRDEGESWVILNPEIDRPKGNDTAQEGCLSVPGLYGQVKRPKTVRLRGFDLQGNEINQ 122 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 DG +A +QHE+DHL G +F D + + + +E+ Sbjct: 123 VLDGFMARVVQHEVDHLDGIMFFDRIGEEGLRDLEGHLEEFK 164 >UniRef50_A5D1C0 Peptide deformylase n=3 Tax=Clostridia RepID=DEF_PELTS Length = 155 Score = 181 bits (460), Expect = 7e-45, Method: Composition-based stats. Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 3/152 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +++ + D L++ AK V ++N I +++D+M ETMY G+GLAA Q+ + +R+IV Sbjct: 1 MAVYKIVELGDRILKERAKEVPKINQNIIKLLDNMAETMYHARGVGLAAPQIGVSKRVIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +DV E L +INP + +G EGCLSIP V RA ++++ LDR GKP E Sbjct: 61 VDVGEG---LLEMINPVITSCAGHETDSEGCLSIPGIVGDVTRASVIEVKGLDRRGKPLE 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 ++A G LA +QHE+DHL G LF++ +++ Sbjct: 118 VKAKGYLARALQHEIDHLDGILFIEKAKNIRK 149 >UniRef50_C7NDD2 Peptide deformylase n=4 Tax=Fusobacteriaceae RepID=C7NDD2_LEPBD Length = 172 Score = 181 bits (459), Expect = 9e-45, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 4/167 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ LR+ ++ V+ V+ ++ +D+M M G+GLAA QVDI +R V+ Sbjct: 1 MKIVLYGHPTLRQKSEKVDVVDDNVRETLDEMVALMRKANGVGLAANQVDIAKRFFVL-- 58 Query: 64 SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 E+ +INPE+LE S E +EEGCLSIP V R K+K++ L+ +GK E Sbjct: 59 -EHDGVVKKVINPEILEFSDEIVDMEEGCLSIPGVFKKVNRPAKIKVKYLNENGKEVVEE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + + + QHE DH+ G LF D LS + ++ + +K++ L R + Sbjct: 118 LEEMWSRAFQHEFDHIEGILFTDKLSVMNKRLVAKKLDVLKRDFTKG 164 >UniRef50_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C38FB Length = 184 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 8/174 (4%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ P LR AKPV ++A++Q+ M E MY EG+GLAA QV + ++IV++ Sbjct: 1 MKIVRYPHPALRAKAKPVIAIDADVQKAAAQMVELMYRSEGLGLAAPQVTLDYQMIVLNP 60 Query: 64 ---SENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 ++ D+ +V INP ++E G EGCLS P V R + V ++ + G+ Sbjct: 61 LGEADQPDQEVVAINPVIVEAKGSTINDREGCLSFPGLYQNVRRYKTVTVKFYNLKGELV 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK----LDRLKARA 169 + A L A QHE+DHL G LF+D + L R ++ +EK ++ K + Sbjct: 121 QTTAHDLAARVWQHEIDHLQGTLFIDKMGSLGLSRSQKDLEKFISDFEKDKKKG 174 >UniRef50_Q3ZXA9 Peptide deformylase n=5 Tax=Dehalococcoides RepID=DEF_DEHSC Length = 167 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 61/152 (40%), Positives = 95/152 (62%), Gaps = 1/152 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +P+ LRK AK V ++ IQ ++DDM ETM + +G GLAA QV + R++V Sbjct: 1 MAIRRICELPEPVLRKKAKKVPSIDGSIQTLIDDMIETMNSADGAGLAAPQVGVSLRLVV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + E VLINPE+++K G+ + EGCLSIP + RAE V + LDR GK Sbjct: 61 FREPDTK-EATVLINPEIVKKEGQRQVTEGCLSIPGYFGELTRAETVTAKGLDRHGKACR 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 ++ G++A ++HE +HL G L++D+L Q Sbjct: 120 IKGTGIVAQLLEHETEHLDGILYIDHLESEDQ 151 >UniRef50_D1R4B7 Peptide deformylase n=2 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B7_9CHLA Length = 178 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 11/173 (6%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + D LRK VE+++++++++V+DM ET+ A GIGLAA QV + + V Sbjct: 3 LPLAFYGDPILRKKCARVEQIDSQLKQLVNDMVETLEAHRGIGLAAPQVHHELNLFITKV 62 Query: 64 S-------ENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRD 115 E+ V +NP++L S E EGCLSIP A V R + ++ D D Sbjct: 63 PIRYKNGKEDSGNLHVFVNPKILAYSEEKNRYTEGCLSIPNVYAPVERPLSITVQYTDLD 122 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 GK + GL A CI HE DH+ G LF+D + K+ R++++ L + + Sbjct: 123 GKTCVEDFSGLEARCILHENDHINGVLFIDRI---KKGNERKQLDPLLKQIKK 172 >UniRef50_C1ZAV5 Peptide deformylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAV5_PLALI Length = 199 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 8/171 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L+++ LR + PV E+N+E+++ + +MFE MYA +GIGLA+ QV I ++ + Sbjct: 4 MA-LEIVKYGHPALRHKSTPVTEINSELRKAIAEMFELMYAAKGIGLASNQVAIPRQFFI 62 Query: 61 IDVSEN---RDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ++++ + +DE +V INP +L + EEGCLS P V RA +V I A D DG Sbjct: 63 LNLTGDAAEKDEEVVFINPVILNRKSSCEGEEGCLSFPGLYGPVKRAGEVLIEAFDLDGN 122 Query: 118 PFELEA----DGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 FE+ D L +QHE DHL G LF+D ++ ++ + ++++ ++ Sbjct: 123 CFEMTLSAKEDDLAVRAVQHESDHLDGMLFIDRMTDRARKERQVEIDQFEQ 173 >UniRef50_A7G6C0 Peptide deformylase n=14 Tax=Clostridium RepID=A7G6C0_CLOBH Length = 178 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 1/152 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++L + D+ L++V+K VE ++ EI I+ D+ +T+YA GIGLAA Q+ +RI + Sbjct: 23 MAIREILQVGDKTLKRVSKKVECIDDEITGIIKDLKDTLYAGTGIGLAAPQIGYLKRIFI 82 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ID+ + E ++LINP+ +K G+ EEGCLS P +V R +V I L+ G+ Sbjct: 83 IDLRNGQ-EPIILINPKFSKKIGKEESEEGCLSYPGYEGIVIRPRRVAITGLNEKGEEVT 141 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 EA GLL HE DHL G +++D + + Sbjct: 142 YEATGLLKNAFCHEYDHLDGIVYIDKAKKVYK 173 >UniRef50_Q83CV9 Peptide deformylase 1 n=4 Tax=Coxiella burnetii RepID=DEF1_COXBU Length = 170 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 78/169 (46%), Positives = 111/169 (65%), Gaps = 4/169 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAA-TQVDI--HQRII 59 + ++L PD RL+ A+ VE+ + +Q+++D+MFET YA A TQ+D+ + I Sbjct: 1 MFKILQYPDPRLKTAAQRVEKFDDALQKMIDEMFETHYAATNCAALAATQLDMENPKHIT 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPE-QRALVPRAEKVKIRALDRDGKP 118 VID S N+D+ L L+N E++E+SGE EEGC+S+ V RA K+K+RA DR GKP Sbjct: 61 VIDFSPNKDQPLCLVNAEIIERSGEHTEEEGCMSVGGGTFEKVTRAAKIKVRARDRYGKP 120 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 E EADG +A CIQHE+DHL G +F+D LS LK+ RI +++ KL R Sbjct: 121 VEFEADGFMAKCIQHELDHLNGIIFLDRLSTLKRGRIDKRLGKLRRQGK 169 >UniRef50_B0SHH1 Peptide deformylase n=6 Tax=Leptospira RepID=DEF_LEPBA Length = 179 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 12/177 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M+V ++L I + LR+ ++ V E + ++++ DMFETM +G+GLAA Q+ + ++ Sbjct: 1 MAVRKILKIGNPILRQTSEDVSESEIQTKDFKKLIRDMFETMRHADGVGLAAPQIGVLKK 60 Query: 58 IIVIDVSENRDER--------LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVK 108 ++V+ ++ + +++NPE+ S EGCLS+P R V R K++ Sbjct: 61 LVVVGQEDDNERYPGTPEVPNQIILNPEITPLSPPRDGFWEGCLSVPGMRGYVERPNKIR 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 ++ D + + +G AI +QHE DHL G L++D L K + ++ +L Sbjct: 121 MKWRDENYVEHDEIIEGYRAIVLQHECDHLFGVLYVDRLKSTKLFGYNEDIDTAGKL 177 >UniRef50_C1MGI0 Peptide deformylase n=2 Tax=Viridiplantae RepID=C1MGI0_9CHLO Length = 210 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 3/169 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ P +LR K + +AE++++ D MF MY +G+GLAA QV ++ R++V + Sbjct: 37 LEIQKYPSAKLRDENKKIGVFDAELKKLADAMFAKMYESDGVGLAAPQVGVNYRLMVYNE 96 Query: 64 SENRDE--RLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + R + +V++NP++++ S E EEGCLS P A V R V I A + +GK F+ Sbjct: 97 AGERGKGAEVVMVNPKIVKFSKEKDMFEEGCLSFPAIYADVERPTAVTIEAQNVNGKKFK 156 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + DG A QHE DHL G LF D ++ ++R +++ L Sbjct: 157 MTLDGFQARVFQHEYDHLDGVLFHDRMAADVVAKVRAELDDLIAAHPEG 205 >UniRef50_C7R2E5 Peptide deformylase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R2E5_JONDD Length = 215 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 16/170 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ D LR+ A V E + + ++V DM++TM G+GLAA Q+ + QRI V D Sbjct: 2 IHPIVIDGDPVLRQRAAEVTEFDDALVQLVADMYDTMRVSNGVGLAAPQIGVGQRIFVFD 61 Query: 63 VSENRDERL-VLINPEL----------LEKSGE-----TGIEEGCLSIPEQRALVPRAEK 106 + ++R V++NP L L+ G+ EGCLS P R Sbjct: 62 APDEDEQRRGVVVNPSLMIVQRPPRFALKGEGKRPPKSLTDVEGCLSFPGPDFEAKRHYA 121 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 V++ D G+P ++ +G A +QHE DHL G L++D L + R Sbjct: 122 VRVTGWDEHGEPVVIDGEGWFARVLQHEYDHLDGLLYVDRLKGRDKAEAR 171 >UniRef50_Q8YVH1 Peptide deformylase 2 n=25 Tax=Bacteria RepID=DEF2_ANASP Length = 179 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L ++ + + LR+ A VE + +A IQ+++DD+ T+ G+G+A+ QV R+ ++ Sbjct: 5 LLPIIQLGNPTLRQKAAWVENIHDATIQQLIDDLIATVAKANGVGIASPQVAQSYRLFIV 64 Query: 62 DVSENRD-------ERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALD 113 N E +INP+++ S E EGCLS+P R LVPR + +++ D Sbjct: 65 ASRPNPRYPHAPEMEPTAMINPKIVGHSTEIVEGWEGCLSVPGIRGLVPRHQAIEVEYTD 124 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 R G + +A QHE DHL G LF+D + ++ ++L Sbjct: 125 RYGNLQKQTLTDFVARIFQHEFDHLDGVLFIDRVESNLNTITEEEYQEL 173 >UniRef50_Q3SKP4 Peptide deformylase n=6 Tax=Betaproteobacteria RepID=Q3SKP4_THIDA Length = 177 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 9/168 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V +VL + D RL A+ VE AE+ ++V DM +TM A G GLAA Q+ + +++ Sbjct: 1 MAVREVLKMGDPRLLAPARAVERFATAELAQLVADMHDTMRALNGAGLAAPQIGVSLQVV 60 Query: 60 VIDVSENRDER-------LVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRA 111 + +V+ N VL+NP + S EGCLS+P R LVPR ++ R Sbjct: 61 IFEVNANPRYPDAAEVPLTVLVNPVVTPLSDATEEGWEGCLSVPGMRGLVPRHGEIHYRG 120 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 D G+ E G A +QHE+DHL G L+ + L+ + Sbjct: 121 FDAAGRALERRVSGFHARVVQHEVDHLNGILYPMRIPDLRNFGFTDTL 168 >UniRef50_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chloroflexi bacterium RepID=Q2Z018_9CHLR Length = 176 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 12/164 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ +++ PD LR+ A+ V + E+Q ++DDM ETM + G+GLAA QV ++I Sbjct: 1 MSIREIVFTPDPVLRRKARKVTDFGPELQTLIDDMVETMRSAPGVGLAAPQVAESWQVIT 60 Query: 61 IDVSEN-----------RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 I+ SE + L+NP++ S ET EGCLS+P V R E V Sbjct: 61 IEYSEESEEGEEGEEKVPPKLYTLVNPQITRASNETIVGTEGCLSVPGIVGEVERNEAVT 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 ++A +R G+P ++A LA QHE+DHL G LF D L + Sbjct: 121 VKAQNRRGQPVTIKAQDWLARIFQHEIDHLEGVLFTDLTDELWR 164 >UniRef50_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FF41_9CHLO Length = 257 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 3/166 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + P LR K V +++++++ MF+ MY EG+GLAA QV ++ R++V + Sbjct: 84 LAIQKYPHASLRNDNKIVGVFDSDLEKLAQAMFKIMYDTEGVGLAAPQVGVNYRMMVYNE 143 Query: 64 SENRD--ERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + + +VL+NP++++ S EEGCLS P+ A V R V++ A + GK F+ Sbjct: 144 AGEPGRGKEVVLVNPKIVKFSKTKDLFEEGCLSFPKIYADVERPTSVQVEAQNLRGKKFK 203 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 + DG A QHE DHL G LF D ++ + ++ +++ L Sbjct: 204 MTLDGFEARVFQHEYDHLDGVLFHDRMTDEVRGTVQGELDALIEAH 249 >UniRef50_D1ATH4 Peptide deformylase n=1 Tax=Anaplasma centrale str. Israel RepID=D1ATH4_ANACI Length = 199 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 62/180 (34%), Positives = 106/180 (58%), Gaps = 20/180 (11%) Query: 2 SVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 SVL ++ +PD RL ++ V ++ +++ + +DM +TMY +GIGLAA QV +H+RI Sbjct: 13 SVLPLVTLPDSRLSLCSEEVHADDFGQQLETLANDMLDTMYHNKGIGLAAVQVGVHKRIF 72 Query: 60 VIDVSENRDE-----------------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALV 101 V+D+ D V++NP ++E+S +EEGCLS+P+ R V Sbjct: 73 VVDLEYGSDRYEVPRDDGAGEFRATCGPTVVVNPVIVEESERLVAMEEGCLSVPDYRETV 132 Query: 102 PRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 R E + ++ +D + + ++A GLLA C+QHE+DHL G +F+ +S LK+ + +K+ + Sbjct: 133 RRPESIVVQYVDLNRRQKYIKACGLLARCLQHELDHLNGVVFLQRISKLKRDMVMEKIRR 192 >UniRef50_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TMS8_PHYPA Length = 202 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 13/178 (7%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L+V+ PD RLR K ++ + ++Q++V++M + MY +G+GLAA QV ++ R++V + Sbjct: 11 LEVILYPDPRLRAKNKFIKVFDDKLQQLVNEMLDVMYKTDGVGLAAPQVGVNVRLMVYNP 70 Query: 64 SENR--DERLVLINPELLEKSG-ETGIEEGCLSIP----------EQRALVPRAEKVKIR 110 S R + VL+NP +++ +EGCLS P A V R + V+I Sbjct: 71 SGERGSGKEYVLVNPRIVKYGKSRDLFDEGCLSFPVLERGPNQSLTIEAEVERPKSVRID 130 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A D GK F + A QHE DHL G L+ D ++P IR ++EKL++L Sbjct: 131 AQDIKGKKFSINLKDFQARIFQHEYDHLEGILYFDRMTPEVLDTIRPELEKLEKLYEE 188 >UniRef50_A1AXL8 Peptide deformylase n=4 Tax=Gammaproteobacteria RepID=A1AXL8_RUTMC Length = 185 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 76/165 (46%), Positives = 104/165 (63%), Gaps = 21/165 (12%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L +L+ PD+RLR AK V ++ IQ ++ DMFET+YA++GIGLAATQVD H +++VID Sbjct: 2 ILPILNYPDKRLRTKAKHVNVIDETIQTLIKDMFETIYAKDGIGLAATQVDQHLQVVVID 61 Query: 63 VSEN---------------------RDERLVLINPELLEKSGETGIEEGCLSIPEQRALV 101 + N + L INP + EK G+ EGCLS+P+ +A V Sbjct: 62 LEPNSQDDYQLFLKNFQRSSHKQSQKHHPLCFINPRIKEKDGQEKHIEGCLSVPDFQAEV 121 Query: 102 PRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 RA +K+ AL+ G+ F L+A GLLAICIQHE+DHL G LF+DY Sbjct: 122 QRANHIKVEALNEKGEVFTLQATGLLAICIQHELDHLKGVLFVDY 166 >UniRef50_B1ZMD5 Peptide deformylase n=2 Tax=Verrucomicrobia RepID=DEF_OPITP Length = 192 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 19/187 (10%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ ++H D LR+ + + + + ++ +M TM GIGLAA Q+ ++ V Sbjct: 1 MSLR-IVHYNDPVLRRKGEKITAFDKALSQLAKEMLATMQEAAGIGLAAQQIGRPVQLCV 59 Query: 61 IDVSENRDE----------------RLVLINPELLEKSGETGI--EEGCLSIPEQRALVP 102 +D+ + +++ NPE+ EEGCLS P+ R VP Sbjct: 60 VDLRRAEIDFTWELDGAKPPLDLIMPMIITNPEITPDRETDVYLVEEGCLSFPKIRGDVP 119 Query: 103 RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 R + + +R D G P L DGLLA CIQHE+DHL G LF+D + + I V+ L Sbjct: 120 RPDAITVRYQDEHGTPHTLHCDGLLARCIQHEVDHLNGVLFIDRMEKKTRAAIDADVKTL 179 Query: 163 DRLKARA 169 ++ A Sbjct: 180 AKITRAA 186 >UniRef50_C1DV92 Peptide deformylase n=4 Tax=Hydrogenothermaceae RepID=C1DV92_SULAA Length = 179 Score = 179 bits (454), Expect = 4e-44, Method: Composition-based stats. Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 9/170 (5%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 ++ PD+ L++ K ++ + ++ +D M+E MY EEG+GLAA Q+ I +I+VID S Sbjct: 4 RIRTWPDKILKEPTKEIDFFDDRLKEYIDKMWEFMYKEEGVGLAANQIGIPYQILVIDTS 63 Query: 65 ------ENRDER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 E E +VLINP+++EK G+ EGCLS P + +PR ++VK+ + Sbjct: 64 IREKKNEEETEPPVKMVLINPKIVEKEGQVMSTEGCLSFPGVQITIPRYKRVKVVGKNEK 123 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 G+ +E+ L+I +QHE+DHL G F+ YLSPLK++ + K K + Sbjct: 124 GEDVVVESSEFLSIVLQHEIDHLNGIPFISYLSPLKRKLVLDKYLKSLKE 173 >UniRef50_A3JYF4 Peptide deformylase n=1 Tax=Sagittula stellata E-37 RepID=A3JYF4_9RHOB Length = 165 Score = 179 bits (454), Expect = 4e-44, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 4/166 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L +L PD LR + PV + + R+V+DMFETMYA G GLAA QV + R+ V Sbjct: 1 MSLLPILTWPDTGLRAASMPV-RAPSAVARLVEDMFETMYAAPGRGLAAPQVGVRSRLFV 59 Query: 61 IDVSENRDE--RLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +D + E V INP + G E EE CLS+P +V R ++++R D D K Sbjct: 60 MDATWKDGEKTPTVCINPVVAPLDGPEEPGEEACLSMPGVSVMVTRPTRIRLRYTDLDDK 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E+ G A QHE DHL G + +L ++ + + E L Sbjct: 120 THEVVLTGAAARIAQHETDHLDGVMHFQHLPLAERGVLLAEYEALR 165 >UniRef50_A2BU25 Peptide deformylase n=50 Tax=cellular organisms RepID=DEF_PROM5 Length = 203 Score = 178 bits (453), Expect = 5e-44, Method: Composition-based stats. Identities = 63/161 (39%), Positives = 103/161 (63%), Gaps = 5/161 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ + ++ LR AK + +V+ + + + DM ++MY+ +GIGLAA QV I + ++VID+ Sbjct: 31 LEIFKLGNDVLRTNAKRIGKVDLDTRNLAKDMLKSMYSAKGIGLAAPQVGISKELLVIDI 90 Query: 64 S--ENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 + ++ E L+LINPE+ EEGCLSIP V R +K+R D G+P + Sbjct: 91 NFEDSAAEPLILINPEITAFGNTLNSYEEGCLSIPGVYLNVVRPSTIKLRFSDEMGRPRK 150 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 + ADGLLA CIQHE+DHL G LF+D ++ ++ ++ +++K Sbjct: 151 MNADGLLARCIQHEVDHLRGVLFVDRVTS--KEDLKTELKK 189 >UniRef50_Q9XAQ2 Peptide deformylase 3 n=23 Tax=Actinomycetales RepID=DEF3_STRCO Length = 208 Score = 178 bits (452), Expect = 7e-44, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +V +V + +E L + + V E ++ ++DDMF TMY EG GLAA QV + R+ V Sbjct: 25 AVRRVTEVGEEVLHRPCRDVTEFGPDLAALIDDMFRTMYVAEGAGLAANQVGVDLRLFVY 84 Query: 62 DVSENRDERLV--LINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D ++ R V L+NP L EGCLS+P VPR ++ +R LD+D Sbjct: 85 DCPDDEGVRHVGHLVNPVLDALDPAARRLLDEGEGCLSVPGAVMAVPRPDRAVVRGLDKD 144 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 G P +E G A C+ HE DH+ G +++D LS +++ ++ Sbjct: 145 GVPLLVEGTGYFARCLAHETDHVNGHVYLDRLSGRERKAALRQ 187 >UniRef50_C8WHT7 Peptide deformylase n=3 Tax=Coriobacteriaceae RepID=C8WHT7_EGGLE Length = 183 Score = 178 bits (452), Expect = 7e-44, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +V+ ++ P+ L +V P + + ++++ M + MY +G GLAA Q+ + +R++VI Sbjct: 3 TVISIVQSPNPILNQVCDPCDLGDKSLKKLAKQMAKAMYKNDGCGLAAPQLGVAKRLVVI 62 Query: 62 DVSENRDE--RLVLINPELLEK-SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKP 118 D + E +VL+NP L++ EGCLS P + R ++R D DG+ Sbjct: 63 DCDQEEGEQNPIVLVNPVLVDTQGDPVVAGEGCLSCPGITVPIARPPFARVRYFDLDGEE 122 Query: 119 FELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +E+E D LL C+QHE+DHL G + P+ + + E AR Sbjct: 123 WEIEGDDLLGRCLQHELDHLDGITMFERCDPMARIEALRDYEIALAAGAR 172 >UniRef50_D2NSH9 N-formylmethionyl-tRNA deformylase n=2 Tax=Rothia mucilaginosa RepID=D2NSH9_9MICC Length = 214 Score = 178 bits (451), Expect = 8e-44, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 2/169 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++L + + D LR V P+ + ++ R++DDM ETMY G+GLA QV I ++I Sbjct: 17 MTILSIRTVGDPVLRSVCDPITVFDDDLARLIDDMLETMYDVGGVGLAGPQVGISKQIFT 76 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 D +INP L + EGCLS+P Q++ PR ++ +DR G+P Sbjct: 77 F--GGIDDREGYIINPVLEVGEEDQEGGEGCLSVPGQKSATPRKNWARVTGVDRHGEPLV 134 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 LE +GL A +QHE DHL GKLF+D L +QR+ + + D A Sbjct: 135 LEGEGLFARMLQHETDHLHGKLFIDRLVGEDRQRVMRALRAADYNNVAA 183 >UniRef50_A3EQQ7 Peptide deformylase n=2 Tax=Leptospirillum sp. Group II RepID=A3EQQ7_9BACT Length = 177 Score = 178 bits (451), Expect = 9e-44, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 4/173 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M +L D RL + V ++ E+ V MFE +Y GIG+AA QV + R V Sbjct: 1 MKPAGILSYGDPRLLIKSTEVTRIDQEMSDFVRGMFELLYRVPGIGIAAPQVGCNMRFFV 60 Query: 61 IDV----SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 D+ + +INP + K G EEGCLS P V RA +++I+ +D +G Sbjct: 61 FDMNRRADPGSRTPVTMINPVISAKEGAITQEEGCLSFPGIFVPVERALRIEIKGVDMEG 120 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 K LE +GL A IQHEMDHL G L ++++ + R+++++ ++++ + Sbjct: 121 KDLVLEGEGLFARLIQHEMDHLEGVLLSEHMTRWDKLRLQKEMRAIEKIGRKG 173 >UniRef50_Q72H33 Peptide deformylase n=8 Tax=Deinococci RepID=DEF_THET2 Length = 192 Score = 178 bits (451), Expect = 9e-44, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 16/182 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV-I 61 V + D LR+ A+PVE+ + I+R+ +DM ETM+ +G+GLAA Q+ + QR+ V + Sbjct: 2 VYPIRLYGDPVLRRKARPVEDFS-GIKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFVAV 60 Query: 62 DVSENRDER------------LVLINPELLEKSGETGIEEGCLSIPEQR-ALVPRAEKVK 108 + ++ + V+ NP + + G EGCLS+P VPRAE+++ Sbjct: 61 EYADEPEGEEERPLRELVRRVYVVANPVITYREGLVEGTEGCLSLPGLYSEEVPRAERIR 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE-KLDRLKA 167 + D +G+ LE +G +A QHE+DHL G LF + L K++ + +L R + Sbjct: 121 VEYQDEEGRGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKREAFLEANRAELVRFQK 180 Query: 168 RA 169 A Sbjct: 181 EA 182 >UniRef50_Q9K4A0 Peptide deformylase 4 n=7 Tax=Streptomyces RepID=DEF4_STRCO Length = 216 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 6/164 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 + + + L K + V + E Q++V DMF + EG+GLAA Q+ + +++ V D Sbjct: 42 RPITVVGNPVLHKECEDVTDFGEEFQQLVADMFASQRTAEGVGLAANQIGVSKKVFVYDC 101 Query: 64 SENRDERLV--LINPELLE----KSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ++ R V + NP L+E + EGCLS+P A + R + ++ D G Sbjct: 102 PDDEGVRHVGVVCNPRLVELPADRRRLDDSNEGCLSVPTAYAPLARPDYAEVTGQDEKGN 161 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 P ++ G A C+QHE DHL G L++D LS +++ +++ + Sbjct: 162 PVKVRGTGYFARCLQHETDHLYGYLYIDRLSKRERKDALRQMAE 205 >UniRef50_C7H120 Peptide deformylase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H120_9FIRM Length = 154 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 2/152 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ QV DE LRK A+PV EV I+ ++ DM ETM+ E G+G+AA QV I +R+ + Sbjct: 1 MALRQVRKKGDELLRKKARPVGEVTDRIKLLLQDMEETMHKEGGVGIAAPQVGILKRMFI 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ + +I+PE+++ SGE EEGCLS+P V R EK++++ DGK Sbjct: 61 ME--PVQGSPEYVIDPEIIKASGEQECEEGCLSVPGVVGTVIRPEKIEVKYTGLDGKERR 118 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 AI HE DHL G LF+D S +++ Sbjct: 119 RLLTEFEAIVFSHEFDHLEGVLFIDKASNIRK 150 >UniRef50_A4WNU7 Peptide deformylase n=25 Tax=Rhodobacterales RepID=A4WNU7_RHOS5 Length = 167 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 64/164 (39%), Positives = 97/164 (59%), Gaps = 1/164 (0%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + + PD+RL+ A PV+ V EI I DDM ETM A G GLA Q+ + R+ V+D Sbjct: 2 IRPFVMYPDKRLKTAAAPVDAVTDEIHAIWDDMVETMDAMPGYGLAGPQIGVMLRLAVVD 61 Query: 63 VSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 S++R + + L NPE+L SG+ EEG ++P A++ R V +R L+ G+ E Sbjct: 62 CSDSRGKAIRLANPEILHASGQFREHEEGSPNLPGATAVISRPRAVTVRFLNTAGEMEER 121 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 + + A +QH++DHL GKL++D+LS LK++ + K EK R Sbjct: 122 DFVDIWATSVQHQIDHLNGKLYIDHLSALKRKMVIAKSEKYLRR 165 >UniRef50_C5VIH1 Peptide deformylase n=2 Tax=Prevotella RepID=C5VIH1_9BACT Length = 186 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 9/176 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 VL + LRKVA+ + ++Q ++ +MFET A +G+GLAA Q+ R++V+D Sbjct: 2 VLPIYTYGQPVLRKVAEDIPLDYPDLQELIQNMFETNTASDGVGLAAPQIGKSIRVVVVD 61 Query: 63 -------VSENRDERLVLINPELLEK--SGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 E +D R IN +LE S +EEGCLS+P V RA++V ++ D Sbjct: 62 LDVLSDTFPEYKDYRHAFINGHILEYDDSETETLEEGCLSLPGVHESVTRAKRVYVKWYD 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 + E DG LA IQHE DHL G++F D LS ++Q I K++ L + K R Sbjct: 122 ENLVEHEEWIDGYLARVIQHEFDHLEGRVFTDRLSAFRKQMITSKLKALLQGKVRC 177 >UniRef50_A1SJX1 Peptide deformylase n=1 Tax=Nocardioides sp. JS614 RepID=A1SJX1_NOCSJ Length = 199 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + + + + +PV + E++ + DM TMYA +G+GLAA Q+ + + V Sbjct: 22 TARSITRWGTPVMHRAQQPVTTYDDELRALAADMVATMYAADGVGLAACQIGVDLAMFVF 81 Query: 62 DVSENRDERLV--LINPELLEKSGET----GIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D ++ V + NP+L G EEGCLS P R ++ + D Sbjct: 82 DCPDDSGVHTVGVVCNPQLTLPEGRDRQLDESEEGCLSFPGAHVECARPDQASVTGTGLD 141 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G+P DGLLA C+QHE DH G +F D LS ++R+++ ++ Sbjct: 142 GEPVSFSGDGLLARCLQHETDHTRGTVFGDRLSTKLRKRLQKAHDR 187 >UniRef50_B3E344 Peptide deformylase n=11 Tax=Bacteria RepID=B3E344_GEOLS Length = 169 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 96/166 (57%), Gaps = 8/166 (4%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGI-GLAATQVDIHQRII 59 M+V +L P L+K+A V ++ I +V D+ +TM A G G+AA Q+ + R+ Sbjct: 1 MAVQPILKYPHPLLKKMAHRVAALDEPIHTLVQDLIDTMQAGPGSVGVAAPQIGVGLRVC 60 Query: 60 VIDVS------ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V+DVS +N L ++NPE++ +SG + EGC+S+P+ V RA ++ +R LD Sbjct: 61 VVDVSNSRHGKDNNHGLLCMVNPEIISRSGLAVMREGCMSVPDYTGDVERATEITVRFLD 120 Query: 114 -RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 R G+ E+ A G A+ IQHEMDHL G LF+D + + R+K Sbjct: 121 SRSGQQREVAASGFEAVAIQHEMDHLDGLLFLDRIISVSTGLFRRK 166 >UniRef50_D2N0L8 Peptide deformylase n=1 Tax=Campylobacter jejuni subsp. jejuni 414 RepID=D2N0L8_CAMJE Length = 676 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V +++ P+ +L ++ V + +AE+ ++DDM+ETM A G+GLAA QVD+ R+++++ Sbjct: 2 VRKIITYPNPKLFLSSETVNKFDAELHNLLDDMYETMIASNGVGLAAIQVDVPLRVLLVN 61 Query: 63 VSENRDER-----LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 + DE+ L +INPE++ E EGCLS+P+ V R V ++ DR G Sbjct: 62 IFNENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHVLLKYQDRFG 121 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 + ELEA G LA+ IQHE DHL G LF++ +S K+ Sbjct: 122 EFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKR 157 >UniRef50_A6W503 Peptide deformylase n=2 Tax=Actinomycetales RepID=A6W503_KINRD Length = 200 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 V + L + PV + ++ ++V DMF +M A +G+GLAA Q+ + R+ V+D Sbjct: 25 VHPITRYFTPVLHRPTTPVTSFDEDLVQLVADMFASMDAADGVGLAANQIGVDARVFVVD 84 Query: 63 VSENRDERL------VLINPELLEKSGE----TGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++ ER ++NP L +G EGCLS+P + A + R +K + Sbjct: 85 CPDDDTERTGENVVAHVVNPVLELPTGRRRRLDLDGEGCLSVPGEYADLARPDKATVTGK 144 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 D G P ++ GLLA C+QHE DHL G +++D L ++ I Sbjct: 145 DVHGNPVKIVGTGLLARCLQHESDHLDGVVYVDRLPAEQRAEILAA 190 >UniRef50_P63919 Peptide deformylase-like n=42 Tax=Alphaproteobacteria RepID=DEFL_BRUME Length = 164 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V ++ PD RLR A+PV + ++++ DD+ +TM A GIG+ A + I +R++V Sbjct: 1 MTVRLIVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGISKRVVV 60 Query: 61 IDVSENRDERLVLINPELLEK-SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +++ + + INPE++ + +EG +S+P V R ++++R D DG Sbjct: 61 LEL-DRAAGPKIYINPEIVWACEEKIRHQEGSVSMPGVVDEVERHARIRLRYQDLDGNEQ 119 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E+DGLLA+C QHE+D L G ++ LS L+++R+ ++ EKL R Sbjct: 120 TEESDGLLAVCHQHEIDQLDGIFWVQRLSRLRRERLIKRYEKLQR 164 >UniRef50_B5J0U4 Peptide deformylase n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J0U4_9RHOB Length = 164 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 3/159 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M + P L + P + ++ +++D+F+TMY +G LAA Q+ + +R+ V Sbjct: 1 MVTRDIRLWPHAVLTQTCAPASLNDPDLDGLIEDLFDTMYHAKGRVLAAPQIGVTKRVFV 60 Query: 61 IDVSENRD--ERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +DV+ + INP++ E +G+T +E CLSIP+ V R E V++R +RDG Sbjct: 61 VDVTWKDGIRDPRAFINPQITETAGDTVFMDEQCLSIPDTPMPVARPEAVQLRWANRDGG 120 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 DG+LA CIQHE+DHL G + D+ SP + + Sbjct: 121 LETAPFDGILARCIQHELDHLNGTVIFDHQSPEVRAELE 159 >UniRef50_B3CFT5 Peptide deformylase n=2 Tax=Bacteroides RepID=B3CFT5_9BACE Length = 186 Score = 176 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 18/184 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + + + LRK + +E+ IQ +++ M++T+ +G GLAA Q+++ ++ +++ Sbjct: 2 IKPITVYGNSVLRKECEDIEQNYPNIQEVIETMWQTLRDADGCGLAAPQINLPIKLFIVN 61 Query: 63 -----------------VSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRA 104 V E+ IN +++ S + EGCLSIP+ V R Sbjct: 62 SKDTYTYMSAKEREHFFVEEDCGIEETFINAKIIAYSEKVWTAGEGCLSIPDLYEEVTRP 121 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 V IR D + K G A IQHE +H GKL++D LSPL++Q I+ K+ ++ + Sbjct: 122 WSVTIRYQDNEFKEQNRTYYGYTARIIQHEFEHTQGKLYIDRLSPLRKQLIKNKLMRIIK 181 Query: 165 LKAR 168 + Sbjct: 182 GNRK 185 >UniRef50_P94462 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF1_BACSU Length = 160 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 70/160 (43%), Positives = 102/160 (63%), Gaps = 1/160 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +V+ P E L A+ V + ++++++DDM++TM +G+GLAA Q+ I +R V Sbjct: 1 MAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAV 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ ++R R+ L+NPE+LEKSGE EGCLS P V RA+ VK+RA +R GKPF Sbjct: 61 VEIGDDRG-RIDLVNPEILEKSGEQTGIEGCLSFPNVYGDVTRADYVKVRAFNRQGKPFI 119 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 LEA G LA +QHEMDHL G LF +S + +E Sbjct: 120 LEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADME 159 >UniRef50_Q2S316 Peptide deformylase n=2 Tax=Rhodothermaceae RepID=DEF_SALRD Length = 195 Score = 175 bits (445), Expect = 5e-43, Method: Composition-based stats. Identities = 69/159 (43%), Positives = 97/159 (61%), Gaps = 12/159 (7%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + E LR PV+E +Q ++D+M ETM+ GIGLAA QV +R+ V+D Sbjct: 2 ILPIYVYGHEALRNETDPVQENTEALQELIDNMIETMHNAAGIGLAAPQVGRTERLFVVD 61 Query: 63 VSENRDE-----------RLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIR 110 ++ DE +V INPE++E+S +T +EEGCLSIPE R V R E++++R Sbjct: 62 LTPMADEIAEAGEPLPPQPMVFINPEIVEESEDTAEMEEGCLSIPEVREAVARPERIRMR 121 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP 149 DR+ + ELEA G+L+ +QHE DHL G LF DYLS Sbjct: 122 YRDREFEEQELEAGGMLSRVLQHERDHLDGVLFTDYLSS 160 >UniRef50_A7GFN2 Peptide deformylase n=12 Tax=Clostridiales RepID=A7GFN2_CLOBL Length = 150 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 4/146 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYA-EEGIGLAATQVDIHQRII 59 M++ Q+ + DE LRK +K VE V+ +I++I++DM +TMY E G GLAA QV I +R++ Sbjct: 1 MALRQIRLVDDEILRKESKVVEIVDDKIRQILNDMADTMYNTENGGGLAAPQVGILKRLV 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID+ + + L+NP+++++ G + EGCLSIP + + R KV ++AL+ +G+ Sbjct: 61 VIDMGQG---LIKLVNPKIIKQEGTQEVIEGCLSIPNKFGKLIRPAKVTVQALNENGEEI 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMD 145 L G LA C HE+DHL G LF D Sbjct: 118 ILTGTGDLAKCFCHEIDHLEGILFTD 143 >UniRef50_A4E6J7 Peptide deformylase n=3 Tax=Collinsella RepID=A4E6J7_9ACTN Length = 180 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 5/173 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M ++ PD RLR+ +EE+ I+ + + M + M+ G GLAA Q+ +++ Sbjct: 3 MEANGIVLSPDPRLRQECAVIEEITPAIEALAEKMKKIMFENGGCGLAAPQIGELIQLVT 62 Query: 61 IDV---SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 ID +N + VLINP ++E+S EGCLSIP + R + V + A D D Sbjct: 63 IDCDYSDKNDYDPYVLINPVIVEQSDHLVPFSEGCLSIPGISCEIERPDHVVVEAYDLDA 122 Query: 117 KPFELEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 EA G L +C+QHE+DHL G + L P+++ + ++ + AR Sbjct: 123 NLIRYEATGDLFCVCLQHEIDHLHGNTMFERLKPMQRIKAVKEYQDALARGAR 175 >UniRef50_D1CBE7 Peptide deformylase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBE7_THET1 Length = 203 Score = 175 bits (444), Expect = 6e-43, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 19/184 (10%) Query: 1 MSVLQVLHIPDE----RLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V ++L + + LRK + PV + ++E++++V+DM ETM +G+GL+A QV + Sbjct: 1 MAVRRILQMENPDDLSVLRKRSSPVTKFDSELRKLVEDMIETMREADGVGLSAVQVGDLR 60 Query: 57 RIIVIDVSEN-------------RDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVP 102 R++V+++ + V+INPE+ + S ++EGCLS+P + A VP Sbjct: 61 RVVVMEMPGKYEQDEDGNQIEVSPPKLYVMINPEITKVSHDRIPMQEGCLSLPGRYAEVP 120 Query: 103 RAEKVKIRALDRDGKPFELEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 RA V++R D +GK +L A+ LL+ CIQHE+DHL G LF + + R ++ +K Sbjct: 121 RAPWVEVRYKDLNGKEHKLLAEEQLLSQCIQHEVDHLDGILFTERIVDWSTFRDERQKQK 180 Query: 162 LDRL 165 R Sbjct: 181 KSRF 184 >UniRef50_A5FVG7 Peptide deformylase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVG7_ACICJ Length = 209 Score = 175 bits (444), Expect = 6e-43, Method: Composition-based stats. Identities = 68/180 (37%), Positives = 93/180 (51%), Gaps = 11/180 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPV-EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M++L++ + L A+PV + EI R++ DM ET+ G+GLAA QV + R+ Sbjct: 26 MALLKLARLGHPVLFAKAEPVADPAAPEIARLLHDMAETLADAGGVGLAAPQVHVPLRLF 85 Query: 60 VIDVSE------NRDERL---VLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKI 109 + V E D +INPEL+ GE EGCLSIP ALVPRA ++ + Sbjct: 86 IYRVPESRAGGGEHDGPRGLSAVINPELVLHPGEPVEDWEGCLSIPGMSALVPRAARLTL 145 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA 169 RA+D G PF EA G A IQHE DHL G L+ L + ++V + ARA Sbjct: 146 RAIDATGAPFSREAAGFHARVIQHEADHLDGILYPQRLRDPRLMGFNEEVARFRDEIARA 205 >UniRef50_D1N2T1 Peptide deformylase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2T1_9BACT Length = 197 Score = 174 bits (443), Expect = 8e-43, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 15/178 (8%) Query: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65 V D L+ A+PVE V EI+ + +M E + G+G+AA QV R++V D+ Sbjct: 11 VHTAGDPVLKAKARPVEAVTPEIRELACNMQEALRVFSGVGIAAPQVGESLRLVVFDIPV 70 Query: 66 N--------------RDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIR 110 + L +INPE++ S +EGCLS+P+ A V R V R Sbjct: 71 DSMGENPTVGEQLLLPRMPLTVINPEIVASSDVLCESDEGCLSVPDIWAPVVRPATVVFR 130 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A DG+ E E GLL CIQHE+DHL G LF+D +SP + I + +++L R + Sbjct: 131 ATTLDGEVIECECGGLLGRCIQHELDHLDGVLFVDRVSPEAARTIERDLKQLIRYGEK 188 >UniRef50_UPI0001C165F0 Polypeptide deformylase n=1 Tax=Raphidiopsis brookii D9 RepID=UPI0001C165F0 Length = 218 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 63/144 (43%), Positives = 98/144 (68%), Gaps = 3/144 (2%) Query: 8 HIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENR 67 ++ D LR+ AK + +++ E+++++ DM +TMY+E+GIGLAA QV ++++++VID + ++ Sbjct: 49 YLGDRVLRQPAKRITKIDDELRQLIRDMLQTMYSEDGIGLAAPQVGVNKQLVVIDCNPDK 108 Query: 68 DE--RLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E LVLINP + + S E +EGCLSIP+ V R + V+I D G+P L+AD Sbjct: 109 PEIPPLVLINPVIKQVSSELCVAQEGCLSIPKVFLEVKRPKIVEIAYKDEYGRPQTLKAD 168 Query: 125 GLLAICIQHEMDHLVGKLFMDYLS 148 LLA CI HEMDHL G +F+D + Sbjct: 169 NLLARCILHEMDHLNGVVFVDRVE 192 >UniRef50_P73441 Peptide deformylase n=10 Tax=Cyanobacteria RepID=DEF_SYNY3 Length = 187 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 93/148 (62%), Gaps = 3/148 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L++ ++ D+ LR+ AK + +V+ I+++ +M +TMY+ GIGLAA QV I+++++V+D Sbjct: 17 LELHYLGDKVLRQPAKRIAKVDDSIRKLAKEMLQTMYSANGIGLAAPQVGINKQLLVVDC 76 Query: 64 SENR--DERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 +++ + L++INP++ S E +EEGCLS+P V R +++ D G+P + Sbjct: 77 EQDKPDEPPLIMINPQITRTSEELCVVEEGCLSVPNVYMDVTRPRAIEVTYKDEHGRPQK 136 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLS 148 L A IQHEMDHL G +F+D + Sbjct: 137 RLFAELTARVIQHEMDHLNGVMFVDRVD 164 >UniRef50_D1BVC6 Peptide deformylase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVC6_XYLCX Length = 227 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 6/172 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 VL++ I + L A+PV E+ E+ R++DDMF TM EG+GLAA QV + R+ V Sbjct: 33 VLRITEIGEPVLHTPARPVTELGTPELARLIDDMFTTMDVAEGVGLAAPQVGVDLRVFVY 92 Query: 62 DVSENRDERLV--LINPELLEK--SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D++++ +R V ++NPEL + +EGCLS+P A + R IR +D+ G Sbjct: 93 DLTDDAGDRHVGAVVNPELELDLDADPEVEDEGCLSVPGAYAPLERPGGATIRGVDQLGG 152 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ-QRIRQKVEKLDRLKAR 168 P +LEA G LA C HE HL G L+ D+L+P +Q +RQ+ EK + A+ Sbjct: 153 PVQLEATGYLARCFIHEAQHLDGTLYWDHLTPEQQADALRQRDEKRAEVLAQ 204 >UniRef50_A3V199 Peptide deformylase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V199_9RHOB Length = 152 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 4/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L + D LR VA+PV + ++ +V +M TMYA G GLAA QV + QR+ V Sbjct: 1 MA-LDLRFDGDPVLRAVAEPVTAFDEDLALLVAEMLATMYAAPGRGLAAPQVGVSQRVFV 59 Query: 61 IDVSENRD--ERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 ID + + +NP+++ +S T E CLSIP++ V R V +R D G Sbjct: 60 IDTTWKDGDPDPQAFVNPQIIARSKTTATAVEACLSIPDRAFAVTRPIWVDMRWQDIAGD 119 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMD 145 + DG+ AIC+ HE DHL G L D Sbjct: 120 VQQGRFDGVAAICVCHEYDHLDGVLITD 147 >UniRef50_B2S3Z6 Peptide deformylase n=2 Tax=Treponema pallidum RepID=DEF_TREPS Length = 162 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 87/161 (54%), Gaps = 4/161 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 +++ + + L V++PV EV+ +++ + MF M G+GLAA QV R+ V+DV Sbjct: 1 MELKFLGEPCLTTVSEPVSEVDEQLRAFISGMFRVMRGAGGVGLAAPQVGRTVRVFVVDV 60 Query: 64 SENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 INP++ S E EEGCLSIP V R +V ++ LD +GK ++ Sbjct: 61 ---EHHVRAFINPQITAASEEQSSYEEGCLSIPHIYERVLRPRRVSVQYLDENGKRCAVD 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 ADG+LA IQHE DHL G LF+D + ++ ++ L Sbjct: 118 ADGILARVIQHEYDHLDGILFLDRIDEKRRDDALRRYAALR 158 >UniRef50_B8DUA2 Peptide deformylase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUA2_BIFA0 Length = 160 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 3/151 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ ++ +PD LR P+ E+ ++ +V D+ +T+ G++A Q+ + R Sbjct: 1 MAIREIRVVPDPVLRTPCDPITEITPAVRNLVQDLLDTVDDPGRAGVSANQIGVSLRAFS 60 Query: 61 IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 ++ ++NP L E GE +EGCLS+P+ RA+ ++R +D DG Sbjct: 61 YNIDGKIGY---VLNPVLEETRGEQYGDEGCLSLPKLWYKTKRADYARVRGMDLDGNEIV 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 LE DG++ +QHE DHL G L++D L + Sbjct: 118 LEGDGIMGRMLQHETDHLDGHLYIDRLEKDE 148 >UniRef50_C7CNZ7 Peptide deformylase n=24 Tax=Enterococcus RepID=C7CNZ7_ENTFA Length = 169 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 V+ P+E L+ A+PV + EI ++++DM+ETM A +GIGLAA Q+ + ++ VI++ Sbjct: 9 PVVIHPNEHLKMKAQPVTIITDEIVQLLEDMYETMLAHDGIGLAAPQIGKNLQMAVIEID 68 Query: 65 ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 E LINP ++EK G + EGCLSIPE V RA++V +R DR+G+ E+ A Sbjct: 69 EESGH-FELINPVIIEKKGTSIDVEGCLSIPETYGTVERADEVTVRYFDREGEEMEVTAY 127 Query: 125 GLLAICIQHEMDHLVGKLFMDYL 147 G LA QHE+DHL G+LF+D + Sbjct: 128 GYLARAFQHEIDHLNGELFIDKM 150 >UniRef50_A0PNK2 Peptide deformylase n=50 Tax=Actinomycetales RepID=DEF_MYCUA Length = 197 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%) Query: 1 MSVLQVLHIPDERLRKVAKPVE-----EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIH 55 M+V+ + + D L PV + A++ ++ M+ETM A G+GLAA Q+ Sbjct: 1 MAVVPIRIVGDPVLHTPTSPVPVGADGSLPADLPELIATMYETMDAAHGVGLAANQIGYG 60 Query: 56 QRIIVIDVSENR----DERLVLINPELLEKS------GETGIEEGCLSIPEQRALVPRAE 105 R+ V D +++R R V+INP L +EGCLS+P + RA Sbjct: 61 LRLFVYDCADDRRKAAHRRGVVINPVLETSEIPENMPDPDNDDEGCLSVPGESFPTGRAT 120 Query: 106 KVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 ++ LD +G P ELE GL A +QHE HL G L++D L + ++ V+ Sbjct: 121 WARVTGLDAEGNPVELEGSGLFARMLQHETGHLDGYLYLDCLIGRHARSAKRAVK 175 >UniRef50_C3J9U8 Peptide deformylase n=7 Tax=Bacteria RepID=C3J9U8_9PORP Length = 190 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 8/173 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + LR+VA+ + + ++ +M+++MY +GIGLAA Q+ R++VID Sbjct: 1 MLPIYLYGHPVLREVAQDITPEYPNLSGLIAEMWKSMYESDGIGLAAPQIGKSIRLLVID 60 Query: 63 -------VSENRDERLVLINPELLEKSGETGIEE-GCLSIPEQRALVPRAEKVKIRALDR 114 E +D + V+IN + E S ET EE GCLS+P V R +++ I LD Sbjct: 61 ASPMAEYFPECKDFKTVMINARITELSEETLSEEEGCLSLPGIHERVERPKEITIEYLDE 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 P G A +QHE DHL GKLF D++S L++ ++ K+ ++ KA Sbjct: 121 QFTPQTRHLTGFAARVVQHEYDHLEGKLFTDHVSTLRKSLLKNKLARIASGKA 173 >UniRef50_A9G9J7 Peptide deformylase n=2 Tax=Myxococcales RepID=A9G9J7_SORC5 Length = 191 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 11/176 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQR 57 M++L++ HI + LR+ A+ V E + +Q +DD+ ETM G G+AATQV + R Sbjct: 1 MTLLKIAHIGNPVLRQRAREVTEEELSSPAMQAFIDDLVETMRDANGAGIAATQVHVPVR 60 Query: 58 IIVIDVSENRDERL-------VLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKI 109 I ++V +N V++NP + + ET EGCLS+P R +V R ++++ Sbjct: 61 IFAVEVQDNPRYPYKPNIPLTVVVNPVIEPLTQETFENYEGCLSVPNLRGVVDRTTEIRL 120 Query: 110 RALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 LDR+G+P + GL A QHE DH+ G LF+D + + + ++ + Sbjct: 121 TGLDREGRPIDRVVRGLSAGTFQHEKDHVDGVLFVDRVKDPRTLCTWAEFDRYHKQ 176 >UniRef50_Q92HU7 Peptide deformylase-like n=10 Tax=cellular organisms RepID=DEFL_RICCN Length = 183 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 2/164 (1%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 Q+++ P++ +K A+ ++ V+ I+ IVD M + ++ E +GL A V I +RI V+D+ Sbjct: 9 QIVYAPNDIFKKQAEYIDIVDDNIRTIVDKMLQNLHIERAVGLGANMVGILKRIAVVDLH 68 Query: 65 EN-RDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 EN + +V INP + S E EG LS P A + R++ +K++ LD +G EL Sbjct: 69 ENNKSSPIVFINPNITYFSEEKQTFIEGSLSFPGIEASITRSKAIKVKYLDYNGNKQELA 128 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 A+G LA IQHE+++L GK F+D LS LK+ + +K+ K +L Sbjct: 129 AEGFLATVIQHEIEYLNGKTFLDSLSKLKRDTLLKKMLKHIKLH 172 >UniRef50_C0N4F6 Peptide deformylase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N4F6_9GAMM Length = 178 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 9/174 (5%) Query: 4 LQVLHIPDERLRKVAKPV-EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + LR+ A+PV + + Q + + + G+G+AA QV I Q+ ++ Sbjct: 5 FDILQLGHPLLRQRAEPVYDILAPAFQAQAKALLSFVIEKGGMGIAAPQVGISQQFFILS 64 Query: 63 VSENRDERLV-------LINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDR 114 N +INPE + S + EGCLS+P RALVPR + + +R Sbjct: 65 SHPNSRYPYAPDVPPFFVINPERIAHSDTSNKDWEGCLSLPGIRALVPRFDDITVRYQTL 124 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 +G E DG LA QHE DHL G +F+D + + ++ +K A+ Sbjct: 125 EGDTVEKMYDGFLARVFQHEHDHLNGHVFLDRVESNYDVMMEKEWQKQIAQSAK 178 >UniRef50_Q0SDG2 Peptide deformylase n=2 Tax=Actinomycetales RepID=Q0SDG2_RHOSR Length = 188 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 6/170 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M++ +L D RL A V ++E+ VDD+ ET A G GLAA QV + I V Sbjct: 1 MAIRPILIAGDTRLTTPAVTVTAFDSELAAFVDDLHETNTAAHGAGLAANQVGDPRAIFV 60 Query: 61 ID-VSENRDERLVLINPELLEKSGETGIE-----EGCLSIPEQRALVPRAEKVKIRALDR 114 D + + R R +INP L + EGCLS+P +R RA+ ++ +D Sbjct: 61 YDLIDDARRHRGHVINPVLETSPRPETMPDPDDLEGCLSVPGERYPTGRADWARVVGVDV 120 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 D KP +E G LA C+QHE DHL G L++D L + R+ +++ Sbjct: 121 DNKPISVEGTGYLARCLQHETDHLAGHLYLDRLIGRNHRAARKMIKQRQW 170 >UniRef50_D1XJU9 Peptide deformylase n=5 Tax=Streptomyces RepID=D1XJU9_9ACTO Length = 219 Score = 172 bits (437), Expect = 4e-42, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 7/170 (4%) Query: 2 SVLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 SV ++ + +E L + + V + + ++DDMF TMY +G GLAA QVD+ R+ V Sbjct: 36 SVRRITVVGEEVLSRPCQEVTSFGSPGLAALIDDMFVTMYVADGAGLAANQVDVDLRLFV 95 Query: 61 IDVSENRDERLV--LINPELLEKS----GETGIEEGCLSIPEQRALVPRAEKVKIRALDR 114 D +++ R V ++NP L + EGCLS+P +PR ++ +R D+ Sbjct: 96 YDCPDDQGVRHVGHIVNPVLDQPDPGSRRLVDDSEGCLSVPGASMTLPRTDRATVRGFDK 155 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 DG P +E G A C+QHE DHLVG ++D LS ++ +++E+ Sbjct: 156 DGNPLVIEGTGYFARCLQHESDHLVGHTYLDRLSKRDRKDALRQMEERSE 205 >UniRef50_Q7V8G6 Peptide deformylase 1 n=78 Tax=Bacteria RepID=DEF1_PROMM Length = 192 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 10/170 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAE-IQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M+V ++L + + +LRKV+ V++ + E I ++ D+ +T+ A +G GLAA Q+ + R++ Sbjct: 1 MAVKEILRMGNPQLRKVSNVVDDASDELIISLIKDLQDTVKAHQGAGLAAPQIGVPLRVV 60 Query: 60 VI-------DVSENRDER-LVLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 + E +LINP L S EGCLS+P R V R ++ R Sbjct: 61 LFGGGGPNPRYPEAPSIPQTLLINPVLTPIGSDLEDGWEGCLSVPGLRGKVSRWSRIHYR 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE 160 AL+ DG E +G A IQHE DHL G LF D L ++E Sbjct: 121 ALNEDGFEVEHCLEGFPARVIQHECDHLDGVLFPDRLVDSASFGFTGELE 170 >UniRef50_A2SPW1 Peptide deformylase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPW1_METLZ Length = 162 Score = 172 bits (436), Expect = 5e-42, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 4/161 (2%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 +++ L +VA+PV+ + E+ I+D+M + G+GLAA QV I +R V++ Sbjct: 1 MEIQIYGKTVLAQVAEPVDTITPELLAILDEMVPMLKEHRGVGLAAPQVGIGKRFFVMNP 60 Query: 64 SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + +INPE+++ + +EEGCLS+P V R ++ +R + G+ E E Sbjct: 61 GDKVRR---VINPEIMKTGNAFSEMEEGCLSVPGIHKKVRRPRRITVRYTNEAGELIEEE 117 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 A HE DHL G LF+D +SP+ ++ I +++E L Sbjct: 118 LKDYPARVFLHEYDHLDGILFVDRISPIAKKMIAKQLEDLR 158 >UniRef50_D1B5G7 Peptide deformylase n=3 Tax=Synergistaceae RepID=D1B5G7_THEAS Length = 168 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 100/164 (60%), Gaps = 3/164 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 VL+V PD LR+ + V + E+ ++ DM+ TMYA++G+GLAA QV I + + VID Sbjct: 8 VLKVRVFPDPVLRQPVEEVRDFGEELSDLLADMWATMYAKDGVGLAAPQVGISKSLAVID 67 Query: 63 VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 + +R V++NP++L + GE EEGCLS P V R ++++R D G E+E Sbjct: 68 ---HHGDRYVVVNPQILSQDGEEEGEEGCLSFPGIFVNVKRPSRIRLRFQDETGAVKEME 124 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 G +A HE+DHL G+L +D++SP+++Q I+ ++ K + Sbjct: 125 LQGFIARVFLHEIDHLRGRLLIDHVSPIRRQMIKTRLAKRSEDR 168 >UniRef50_C7PQZ8 Peptide deformylase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PQZ8_CHIPD Length = 191 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 17/183 (9%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID- 62 + ++ LRK PV++ + +++++M+ T+ G GLA Q+++ RI +ID Sbjct: 1 MPIVPYGSPILRKQCSPVDKNYDGLDKLIENMWHTLENANGSGLATPQINLPIRIFIIDS 60 Query: 63 ---------------VSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEK 106 + R V INPE+ E S + EGCLSIP A+V R Sbjct: 61 ETSFNTMNPEERKVHFEGDNGIREVFINPEITEYSEAKCDDLEGCLSIPGVAAIVSRPYA 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 VKI DR+ + +GL A IQHE DH+ G+L++DYLS LK + + +K+ ++ + + Sbjct: 121 VKIEYYDRNFQKHTKAFNGLTARIIQHEFDHIEGRLYLDYLSSLKMKLLTKKLAQIKKGR 180 Query: 167 ARA 169 Sbjct: 181 YAC 183 >UniRef50_C0VXF2 Peptide deformylase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXF2_9CORY Length = 180 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 11/165 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 ++ ++ D L +PVE +++DDMFETMYA G+GLAA QV + Q V D Sbjct: 2 IMPIVICGDPVLHTPTQPVE--TPLSPKLIDDMFETMYAANGVGLAANQVGLSQSFFVFD 59 Query: 63 VSENRDERLVLINPELLEKS------GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 + V++NP L E EGCLS+P + RA K+ D +G Sbjct: 60 C---EGVKGVVVNPVLETSEVPETMPDEEEDLEGCLSLPGEFFPTGRASWAKVTGTDENG 116 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 P E E + LA C QHE HL G+++ D ++ ++ + Sbjct: 117 NPVEFEGEDFLARCFQHECGHLKGQVYTDVTIGRYRREAKRAIRD 161 >UniRef50_Q253S4 Peptide deformylase n=14 Tax=Chlamydiaceae RepID=DEF_CHLFF Length = 186 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 10/174 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ + LR+ A + E+ I+++V DM+ETM A +G+GLAA QV + V+ Sbjct: 2 IRELEYYGSHILRRKADIIPEITDTIRQLVQDMYETMVAHKGVGLAAPQVGESLSLFVVC 61 Query: 63 VSENRDE--------RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALD 113 V ++ V INP L S + EGCLSIP RA V R + + + AL+ Sbjct: 62 VEGETEDGDLIFCDFPKVYINPVLSNASEDLVIGREGCLSIPGLRADVYRPQSITVTALN 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYL-SPLKQQRIRQKVEKLDRLK 166 DG+ F +G A I HE DHL G L++D + P ++ + +EK+ R Sbjct: 122 LDGQEFTEHLEGFPARIIMHENDHLHGVLYIDKMEEPKDIKKFKASLEKIRRRY 175 >UniRef50_A9WHG7 Peptide deformylase n=5 Tax=Chloroflexaceae RepID=DEF_CHLAA Length = 188 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 19/182 (10%) Query: 1 MSVLQVLHIPD----ERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M++ ++L I D + L+ +PV+ + ++++V DMFETM A G+GLAA Q+ I Sbjct: 1 MAIRRILRIDDAEDRKILKMQCRPVKLPDRNLKQLVADMFETMRAAHGVGLAAPQIGIPI 60 Query: 57 RIIVIDVSEN-------------RDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVP 102 ++ +I++ E VLINP +++ SGE + +EGCLS+P +VP Sbjct: 61 QLCIIEIPAEYEERADGSVVEVAPAEPYVLINPRIVKMSGEEVMRDEGCLSLPGWYGMVP 120 Query: 103 RAEKVKIRALDRDGKPFEL-EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 R V + D +GK L A LL IQHE+DHL G LF + + L R K Sbjct: 121 RQTWVTVEFQDLNGKHHRLRRAGDLLGWAIQHEVDHLNGILFTERIRDLSTLRDITKERD 180 Query: 162 LD 163 Sbjct: 181 AQ 182 >UniRef50_B9Z3A2 Peptide deformylase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z3A2_9NEIS Length = 170 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 80/155 (51%), Gaps = 9/155 (5%) Query: 4 LQVLHIPDERLRKVAKPVEEVN-AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 L LR+ A V E + + +V DMF+T YA G+GLAA Q+ + R+IV Sbjct: 3 RPFLPQEHPMLRQHAAAVTEFDTPALHELVQDMFDTQYAGNGVGLAAPQIGVPLRVIVFA 62 Query: 63 VSENRDER-------LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDR 114 + VLINPE+ + EGC S+P QR VPR + ++ RA D Sbjct: 63 YGGGERDPGAPAIPPTVLINPEIRPDAEHIEEDWEGCFSVPGQRGRVPRWQAIRYRAQDI 122 Query: 115 DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP 149 G+ E A+G A IQHE+DHL G LF+D+L P Sbjct: 123 QGRLVEGRAEGFHARIIQHEVDHLNGTLFIDHLPP 157 >UniRef50_A8Z5V9 Peptide deformylase n=3 Tax=Candidatus Sulcia muelleri RepID=DEF_SULMW Length = 189 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 98/177 (55%), Gaps = 12/177 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L ++ + LRK +++ +I ++++M++TMY +GIGL+A Q+ + R+ +I+ Sbjct: 2 ILPIIIYGNSFLRKKCIEIDKSYKDINFLINNMYDTMYQAKGIGLSAPQIGLSIRLFIIE 61 Query: 63 VSE--NRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 + + + V INP +++K G +EGCLSIP + R + I D + K + Sbjct: 62 YNNFLKQKFKKVFINPIIIKKYGYNLISKEGCLSIPNIIENIKRKNNIIIEYYDENWKKY 121 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ---------KVEKLDRLKA 167 + +GLL+I IQHE DH+ GKLF+D + LK I++ K+ KL +L Sbjct: 122 KQHFNGLLSIIIQHEYDHIEGKLFIDNIFILKNILIKKNFNLNYNLYKLYKLSKLYK 178 >UniRef50_B3ETT4 Peptide deformylase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=DEF_AMOA5 Length = 188 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 11/176 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + ++ + LR+ A P+E ++ +++ MF TM A +G+GLAA Q+ ++ V+D Sbjct: 2 IYPIVPYGESILRQTAAPIELGTD-LETLIESMFITMNAAKGLGLAAPQIGKSIQLFVVD 60 Query: 63 VSE--------NRDERLVLINP--ELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 VS R V INP E+ + + T EEGCLSIP VPR ++V+I+ Sbjct: 61 VSPFVGDGMVQPDKHRKVYINPVLEIYQPNTITHYEEGCLSIPGIYVDVPRNKRVRIKFF 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 DR+ + E + + A +QHE DHL GKL +DYL ++ R++ K+E + + + Sbjct: 121 DRNWQAQEEDLVDMPARVVQHEYDHLYGKLHIDYLRADRRLRLKSKLENIKQGRVE 176 >UniRef50_B5Y7H9 Peptide deformylase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7H9_COPPD Length = 171 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 88/156 (56%), Gaps = 6/156 (3%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE--GIGLAATQVDIHQRIIVI 61 + + IPD+ LR A+ V+ E +RIV+DMF M E G+GLAA QV I +R +VI Sbjct: 1 MDIRVIPDKMLRAKAQKVKSFTEEDRRIVEDMFRLMKENEVEGVGLAAPQVGISKRFVVI 60 Query: 62 DVSENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE 120 D+ E + VLINP + EGCLS+P V R +K+K+ + G+ Sbjct: 61 DLDEFHE---VLINPRWEPLGKEKEEDIEGCLSVPGVYGPVERFKKIKVSFTNLYGEKIT 117 Query: 121 LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 L+ DG+L+ +QHE+DHL G LF+D ++ + + Sbjct: 118 LKLDGMLSRVVQHEVDHLDGVLFIDKITDWDRIEVM 153 >UniRef50_A9AZ24 Peptide deformylase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZ24_HERA2 Length = 211 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 22/191 (11%) Query: 1 MSVLQVLHIPDE----RLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V +VL I D LR AK + + + +VDDM ETM G+G+AA QV + + Sbjct: 1 MAVRRVLQIEDPTDAVVLRAKAKRITSFDQSLAGLVDDMIETMREARGVGIAAPQVGVSR 60 Query: 57 RIIVIDVSENRDER-------------LVLINPELLEKSGETGI-EEGCLSIPEQRALVP 102 R++VI+ +E V++NPE+++ S ET + +EGCLS+P + VP Sbjct: 61 RVVVIEEPAQYEEHEDGTQTQIAPAVLYVMVNPEIIKASEETHMLQEGCLSLPGRYTKVP 120 Query: 103 RAEKVKIRALDRDGKPFELE---ADGL-LAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 R + V I+ D G+ L A+ + QHE+DHL G +F D ++ + +K Sbjct: 121 RNKWVTIKYYDLKGREQRLRHIPAEDYKVGHIAQHELDHLDGIMFTDRMTEESKLVDYRK 180 Query: 159 VEKLDRLKARA 169 + RLK R Sbjct: 181 ESESARLKRRG 191 >UniRef50_A8LLB9 Peptide deformylase n=16 Tax=Rhodobacterales RepID=A8LLB9_DINSH Length = 168 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 5/167 (2%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIG----LAATQVDIHQRI 58 + L PD RLR A PV E+ EI+ + DDM +TM A G+G LAA Q+ + Q + Sbjct: 2 IRPFLSWPDARLRTPAAPVAEITDEIRTVWDDMIDTMEAMPGMGPGAGLAAPQIGVMQAL 61 Query: 59 IVIDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 V+D SE R + + NP++L S + EE ++P A + R V +R LD +G Sbjct: 62 AVVDASEERGRAIRMANPQVLHASAQLRSHEEASPNLPGVFAKIDRPRAVTVRFLDANGA 121 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 E + GL A +QH++DHL G+++ D LS K+ + +K KL R Sbjct: 122 VKEQDFVGLWATSVQHQIDHLAGRMYFDRLSKTKRDMLLRKARKLAR 168 >UniRef50_D1YDB7 Peptide deformylase n=3 Tax=Propionibacterineae RepID=D1YDB7_PROAC Length = 200 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 10/173 (5%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 S+ +V + L +PV E + ++ +V DMF TM A +G+GLAATQV + + V Sbjct: 20 SLRRVTRWGESVLHAQTRPVTEFDEDLTTLVRDMFATMNAADGVGLAATQVGVDLSLFVY 79 Query: 62 DVSENRD--ERLVLINPELLEKSGE----TGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 + + NP + G +EGCLS P + R + D Sbjct: 80 ICPDANNVVHHGAFCNPVVTLPEGHDRHLEAADEGCLSWPGGFQSMARPDLATCTGQDPW 139 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 G + G A C+QHE DH G +F D LS R R+K+++ A Sbjct: 140 GNDITVTGTGFFARCLQHETDHCNGIVFGDRLSK----RARRKLDEQHDSVAH 188 >UniRef50_C6MYK8 Peptide deformylase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYK8_9GAMM Length = 179 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 14/177 (7%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQ------RIVDDMFETMYAEEGIGLAATQVDI 54 M++ V+ + +++L ++PV + + I+ ++ +M +TM A+ G+G+AA Q+ Sbjct: 1 MTIQTVVKMGNKQLGIPSEPVVDFDPAIRSYPELTELIQNMKDTMDAKGGVGIAAPQIGY 60 Query: 55 HQRIIVIDVSENRDER-------LVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEK 106 ++R+I+ +N+ +LINP S E EGCLS+P R LVPR +K Sbjct: 61 NKRVIMFGFEKNKRYPNEKPVPFTILINPIYQIMSDELVEEWEGCLSVPGLRGLVPRYKK 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 ++ D +GK A A IQHE DHL G LF L ++ +++E Sbjct: 121 IEYSGYDPEGKLITRVAADFHARIIQHECDHLDGVLFPYRLKDIRFFGYEEELEDRI 177 >UniRef50_A9HS47 Peptide deformylase n=2 Tax=Alphaproteobacteria RepID=A9HS47_GLUDA Length = 176 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 10/172 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPV-EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M++L++ + L + A V + +I R++DDM ETM G GLAA QV + R+ Sbjct: 1 MTLLKIARMGHPVLLRRADEVADPTAPDIARLIDDMIETMEDARGAGLAAPQVHVSLRLF 60 Query: 60 VIDVS--------ENRDERLVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVKIR 110 V V + E VLINP L E + EGCLSIP R +VPR ++ Sbjct: 61 VYRVPAERSAGGDDPPRETSVLINPVLSLVDDEMALRPEGCLSIPGLRGMVPRHVRIAYS 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 LDR G+ + A G LA +QHE DHL G L+ ++ L Q +++ + Sbjct: 121 GLDRAGQAVQGVASGFLANVLQHEYDHLDGILYPMRMTDLGQMGFDEEIGRY 172 >UniRef50_B4U7R8 Peptide deformylase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7R8_HYDS0 Length = 164 Score = 168 bits (426), Expect = 7e-41, Method: Composition-based stats. Identities = 52/162 (32%), Positives = 93/162 (57%), Gaps = 7/162 (4%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEE-GIGLAATQVDIHQRIIVI 61 + ++L P+ L++ +K V +++ I + ++++ ETMY+++ G+A++QV + Q I+V+ Sbjct: 2 IYEILVYPNPLLKEKSKDVNKIDDNIIKHIENLKETMYSKDFCTGIASSQVGVLQNIVVM 61 Query: 62 D------VSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D +N + LINP +++ EGCLS+PE A + R + V ++ALD Sbjct: 62 DASRFRKPPKNHHGLITLINPVIIKSEDSIIFREGCLSVPEYTANIQRYKHVSVKALDEK 121 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQ 157 L+ +G A+ QHE+DHL G LF+D L+ L R+ Sbjct: 122 ENEIILDLEGPEAVLFQHELDHLNGILFLDRLTSLDNLFKRK 163 >UniRef50_Q9FV53 Peptide deformylase 1A, chloroplastic n=13 Tax=Viridiplantae RepID=DEF1A_ARATH Length = 259 Score = 168 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 20/172 (11%) Query: 5 QVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +++ D L + A+ V+ + IQ+I+DDM + M G+GLAA Q+ + RIIV+ Sbjct: 72 EIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVL 131 Query: 62 DVSEN----------------RDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRA 104 + ++ + +V++NP L E+S + EGCLS+ RA V R Sbjct: 132 EDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERY 191 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIR 156 +V + DR GK E+ A G A +QHE DHL G L++D + P + + Sbjct: 192 LEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVD 243 >UniRef50_B0MFU0 Peptide deformylase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFU0_9FIRM Length = 153 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 4/148 (2%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAE-EGIGLAATQVDIHQRII 59 M+V ++ D L+K K V EV+ + ++ +DD+ +T+++ G LAA Q I +R+I Sbjct: 1 MAVRKIRTGNDPILKKKCKTVPEVDDKARQQLDDLMDTLHSSDNGAALAANQAGILRRMI 60 Query: 60 VIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 VID L L+NP ++E SG EGCLS P + R +VK+ ALD +G Sbjct: 61 VIDY---EGYYLKLVNPVIVESSGSQECVEGCLSFPNRFGKTIRPARVKVEALDENGHEV 117 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYL 147 G +A C HE+DHL G++F+D + Sbjct: 118 SYTVVGEMAKCFCHEIDHLDGEVFIDKV 145 >UniRef50_Q83GH8 Peptide deformylase n=2 Tax=Tropheryma whipplei RepID=DEF_TROWT Length = 228 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 63/175 (36%), Positives = 85/175 (48%), Gaps = 19/175 (10%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + L AKPV + + IQ IV DMF TM+A G+GLA Q+ + RI V Sbjct: 36 ILPIYITGHAVLHAPAKPVTDFS-GIQEIVRDMFATMFAAPGVGLAGPQIGLGLRIFVYS 94 Query: 63 VSENRD-ERLVLINPELLEKSG-----------------ETGIEEGCLSIPEQRALVPRA 104 +E + V INP+LL G + EGCLS P + + RA Sbjct: 95 YTEGDTLHQGVAINPDLLIPKGVPKRQTNKQQANNSTSCDEPDREGCLSFPGYQFPLERA 154 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 +V + A D + KPF + A G LA QHE DHL G L++D L+ +RQ V Sbjct: 155 PQVTLSAFDENKKPFTVHATGWLARIFQHEFDHLQGTLYVDRLAQKYSGEVRQAV 209 >UniRef50_C1XRQ6 Peptide deformylase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRQ6_9DEIN Length = 195 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 18/184 (9%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI- 61 + + D LRK A V++ + EI R+ ++MFETM+ G+GLAA QV +R+ V Sbjct: 2 IYPIRLYGDPVLRKRASSVKDFS-EIPRLAENMFETMFEARGVGLAAPQVGRSERLFVFA 60 Query: 62 --------------DVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRA-LVPRAEK 106 D+ + V++NP + ++G+ EGCLSIP + VPR + Sbjct: 61 EYVDAEDEEEGEEADLKTRVKNQWVMVNPAITYRAGQQISTEGCLSIPGLYSDEVPRDLQ 120 Query: 107 VKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE-KLDRL 165 +++ + G+ E +G LA+ +QHE+DHL G LF + L + ++ +L + Sbjct: 121 IRVEYQNELGEKKTQEFEGYLAVVVQHELDHLDGTLFFERLPKDLKAAFLEEHRHELAEM 180 Query: 166 KARA 169 + RA Sbjct: 181 QRRA 184 >UniRef50_O51092 Peptide deformylase n=20 Tax=Borrelia RepID=DEF_BORBU Length = 172 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 2/166 (1%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 ++++ P++ LR K +E ++ +I+ M E M G+GLAA QV + + V+ Sbjct: 8 MEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 66 Query: 64 SENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 LV INP ++E S E + +EGCLSIP + R + V I D +GK F +E Sbjct: 67 ENKMARPLVFINPSIIETSYEFSSYKEGCLSIPGVYYDLMRPKAVVINFHDENGKSFTIE 126 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 LA IQHEMDHL G LF+DY + ++ + + LKA+ Sbjct: 127 NSDFLARIIQHEMDHLNGVLFIDYYEEKLKNKLLKPYMRERGLKAK 172 >UniRef50_C0ZWJ9 Peptide deformylase n=2 Tax=Rhodococcus erythropolis RepID=C0ZWJ9_RHOE4 Length = 188 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 6/171 (3%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + ++ L A+PV E +++Q ++ DMF T A G GLAA Q+ + + + Sbjct: 11 TAQPIIRWGTPVLHAPARPVTEFGSDLQDLLADMFATNTAAHGAGLAAQQIGVDLAVFIY 70 Query: 62 DVSENRDERL--VLINPEL---LEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALDRD 115 D ++ + V+ NP + + + EGCLS+P + R + R D+ Sbjct: 71 DCTDEVGTQRTGVVCNPVVDLPEAVDRQLVDDCEGCLSLPGAYTDLARPDFSTCRGNDQY 130 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK 166 G P E+ A G L C QHE DH+ G +F D L K++++ + +++ Sbjct: 131 GNPIEITAGGTLGRCFQHETDHINGIVFGDRLPTRKRKQLYRDHDEVSDQY 181 >UniRef50_Q2JXI3 Peptide deformylase n=2 Tax=Synechococcus RepID=Q2JXI3_SYNJA Length = 175 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 10/155 (6%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 M++ + + D L +VA+PV E +Q ++++M T+ +G+GLAA QV ++I Sbjct: 1 MTLR-LRQLGDPILTQVAEPVAEFGTPALQNLIEEMLATLKEAQGVGLAAPQVGFPLQVI 59 Query: 60 VIDVSENRD-------ERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRA 111 ++ N E LV++NP L S E EGCLS+P R LV R+ +V++ Sbjct: 60 IVASRPNPRYPDAPQMEPLVMVNPRPLACSEEQVLGWEGCLSVPNCRGLVARSREVEVEY 119 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 +G + A QHE DHL G+LF+D Sbjct: 120 HTPEGSRQRVVWRDFPARIFQHEYDHLRGRLFLDR 154 >UniRef50_C2D8V2 Peptide deformylase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8V2_9ACTN Length = 187 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 5/172 (2%) Query: 2 SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + +++ P L+ V +PV+E+ EI+ + MFE MYA +G GLAA Q+ + R++VI Sbjct: 10 AYKEMVCAPSVILQTVCEPVKEITQEIKDLAHHMFEVMYATDGCGLAAPQIGKNIRLVVI 69 Query: 62 DVSENRD---ERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 D + VL+NP+++ + + EGCLS P V R V AL+ DG Sbjct: 70 DCEWGEGSRKKPYVLVNPKIVVADEADRSMSEGCLSYPGILVPVKRPSHVICEALNLDGD 129 Query: 118 PFELEADG-LLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 EA G LLA C+QHE DHL G D+L K+ ++ + AR Sbjct: 130 LIRYEARGNLLAACLQHECDHLQGVTIPDHLPLHKKMEKLEEYKHALEAGAR 181 >UniRef50_A0LDD7 Peptide deformylase n=5 Tax=Proteobacteria RepID=A0LDD7_MAGSM Length = 177 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 10/177 (5%) Query: 1 MSVLQVLHIPDERLRKVAK--PVEEV-NAEIQRIVDDMFETMYAEEGI-GLAATQVDIHQ 56 M++L VL PD+RL + + EE A Q V+D+ ET G GLAA QVD Sbjct: 1 MAILDVLVYPDQRLLQPCRSLEAEEFKTAAFQAFVEDLIETTQHAPGCVGLAAPQVDHAI 60 Query: 57 RIIVIDV------SENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIR 110 R++V++ + L+L NPE++ G EGC+S+P+ V RA + ++ Sbjct: 61 RMVVVNCGLARKPPDEHHGELILCNPEIISWEGMETAREGCMSVPDYTGNVMRATHISVQ 120 Query: 111 ALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA 167 DR G+ G A +QHEMDHL GKLF D + K +KV + R +A Sbjct: 121 FQDRHGQEQVRHFKGFEARVVQHEMDHLEGKLFTDRVVSRKADLFPRKVYQKKRNRA 177 >UniRef50_B2V9A0 Peptide deformylase n=4 Tax=Hydrogenothermaceae RepID=B2V9A0_SULSY Length = 169 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 9/169 (5%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG-IGLAATQVDIHQRII 59 M L++L PDERL++ + V + E + ++ + TMY G +G+AA QV+ R I Sbjct: 1 MEKLEILKYPDERLKRKSIEVVDFGKEFKEFIEKLTYTMYNSPGGVGIAAPQVNNPIRTI 60 Query: 60 VIDVSENRDE-------RLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++D S++ + +VL NP+++ GE EGC+S+P+ V R +K+ A Sbjct: 61 IVDTSKSTHKTNKVSHGLMVLSNPKIVHAEGEIIFREGCMSVPDYTGNVKRFYYIKVEAQ 120 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 D +G + +G A+ IQHE+DHL GK+F++ + K R+KV K Sbjct: 121 DINGNLITFDTEGFEAVVIQHEIDHLEGKVFIEKVVSPK-DIFRRKVYK 168 >UniRef50_B9JW15 Peptide deformylase n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JW15_AGRVS Length = 166 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 3/164 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+ L++L P L K + V + + D ++ M A G+G+ A V R+++ Sbjct: 1 MA-LKILRYPHPLLAKPCQTVTAFDDRLISFADALYNAMRAAPGVGITAAHVGELMRLVI 59 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 +D+ E R +NPE+L S T +EG + +P V R ++ +R DG Sbjct: 60 LDLPELGGRRD-YVNPEILSFSQNTLDHDEGSVCMPGMTETVTRPRQITLRYQSLDGTVR 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 E E AIC+QHE+D L G ++ LS LK+ R+ +K +K Sbjct: 119 EEELQDFAAICMQHEIDQLDGLFWIQRLSRLKRDRLLKKWQKAA 162 >UniRef50_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago truncatula RepID=Q2HVV8_MEDTR Length = 266 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 24/185 (12%) Query: 5 QVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 ++ D L + A+ V+ + +IQ+I+D M M GI L+A ++ I RIIV+ Sbjct: 66 HIVQAGDPVLHEPAREVDHSEINSDKIQKIIDGMILVMRNAPGISLSAQKIGIPLRIIVL 125 Query: 62 DVSEN----------------RDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRA 104 + + + LV++NP+L KS +T EGCLS+ +A+V R Sbjct: 126 EEPKENLYNYTEEVNKIIDRRPFDLLVILNPKLKIKSNKTFLFFEGCLSVHGFQAVVERY 185 Query: 105 EKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 V++ DR G+P ++ A G A +QHE DHL G L++D + P R + E ++ Sbjct: 186 LDVEVEGFDRYGEPIKINASGWHARILQHECDHLDGTLYVDKMVP----RTFRSWENINM 241 Query: 165 LKARA 169 ARA Sbjct: 242 SIARA 246 >UniRef50_Q7NJV3 Peptide deformylase 1 n=4 Tax=Bacteria RepID=DEF1_GLOVI Length = 227 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 87/187 (46%), Gaps = 24/187 (12%) Query: 3 VLQVLHIPDERLRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 V +++ D LR AKP+ E + IQ+++ M E M G+GLAA QV + +++ Sbjct: 45 VYEIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLV 104 Query: 60 VIDVSENRDER----------------LVLINPEL-LEKSGETGIEEGCLSIPEQRALVP 102 VI+ ER VLINP L +E EGCLSIP + LV Sbjct: 105 VIEDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVA 164 Query: 103 RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 RA V++ ALD P + A G A +QHE+DHL G L +D + + +E Sbjct: 165 RARVVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMD----LQTFSTLENY 220 Query: 163 DRLKARA 169 DR Sbjct: 221 DRFWRGG 227 >UniRef50_C6X128 Peptide deformylase n=5 Tax=Bacteroidetes RepID=C6X128_FLAB3 Length = 190 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 14/161 (8%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 +L + D LRK + + + ++ ++ +MF+TM + GIGLAA QV + R+ ++D Sbjct: 2 ILPIRAFGDAVLRKHCQEITKDYPDLDELIANMFDTMNSAHGIGLAAPQVGLDIRLFIVD 61 Query: 63 V-------------SENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVK 108 + E +D + VLIN ++LE++GE EGCLSIP+ R V R E + Sbjct: 62 LSPLAEDEDYADIADELKDFKKVLINAKILEETGEEWKFNEGCLSIPDIREDVKRKETIV 121 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSP 149 I D + + A IQHE DH+ G LF D+LS Sbjct: 122 IEYYDENFVKHTDTFSDMRARVIQHEYDHIEGILFTDHLSS 162 >UniRef50_D0J8Y3 Peptide deformylase n=2 Tax=Blattabacterium RepID=D0J8Y3_BLASP Length = 180 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 10/158 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEEVN--AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 +L ++ + LRK ++ + +IQ +V DMFET++ +GIGLAA Q+ + R+ + Sbjct: 2 ILPIVVYGNPILRKKCIDIDIYSCRKKIQELVKDMFETIHKVKGIGLAAPQIGKNIRLFI 61 Query: 61 IDVS-------ENRDERLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRAL 112 ++ + + + V IN +L+ G E EGCLSIP V R V I Sbjct: 62 VETPYLLENGKDIDNYKEVFINARILKIHGKEYEFNEGCLSIPGIMGYVKRKSHVSIEYY 121 Query: 113 DRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 D + K + G+ A IQHE DH+ GKLF+DY S Sbjct: 122 DHNWKKKKETLKGICARVIQHEYDHMEGKLFIDYFSSR 159 >UniRef50_A7BDR6 Peptide deformylase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDR6_9ACTO Length = 212 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 35/182 (19%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+L + + L +VA PV+ +++E++ +V DM ETM+A G+GLAA QV + ++ V Sbjct: 1 MSILPICITGEPVLHRVADPVDSIDSELRDLVADMIETMHAAPGVGLAAPQVGVGAQVFV 60 Query: 61 IDVSE--------------NRDERL--------VLINPE------------LLEKSGETG 86 + V++NP +L + + Sbjct: 61 WRYGGAGSFDAQYREVLQLDEGPARGFNTVLHGVVVNPTLDLVWDTEGAGAILPEEPDIA 120 Query: 87 IE-EGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMD 145 +E EGCLS+P + R +R D DG E+ A G LA QHE DHL G L++D Sbjct: 121 LESEGCLSVPGYGYPLRRVLGAVLRGYDVDGNAIEVSARGWLARIFQHEYDHLQGTLYVD 180 Query: 146 YL 147 L Sbjct: 181 RL 182 >UniRef50_Q88EA7 Peptide deformylase 2 n=45 Tax=Bacteria RepID=DEF2_PSEPK Length = 178 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 11/168 (6%) Query: 3 VLQVLHIPDERLRKVAKPVEE---VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 + +L + DERL ++A PV E +AE+Q+++DDMFETM G+GLAA QV I +++ Sbjct: 2 IRDILKMGDERLLRIAPPVPEHMLGSAELQQLIDDMFETMRHVGGVGLAAPQVGIDLQLV 61 Query: 60 VIDVSENRDER-------LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRA 111 + + +L+NP + S E EGCLS+P R +VPR + + + Sbjct: 62 IFGFERSERYPDAEAVPQTILLNPVITPTSSEVEDGWEGCLSVPGLRGVVPRFKHICYQG 121 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 +D G P ADG A +QHE DHL+G+L+ + + + + Sbjct: 122 IDPQGSPINRFADGFHARVVQHECDHLIGRLYPSRIQDFAKFGYTEVL 169 >UniRef50_Q28V78 Peptide deformylase n=2 Tax=Rhodobacteraceae RepID=Q28V78_JANSC Length = 161 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 6/162 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV +VL PD L + + V A ++ D+F+TMYA +G GLAA Q+ + QR+ V Sbjct: 1 MSVRRVLLWPDPLL---SVVCDAVVAVDPELIKDLFDTMYAAKGRGLAAPQIGVLQRVFV 57 Query: 61 IDVSENRD--ERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGK 117 +DV+ + V INP + + + +EE CLSIP+ V R + + +G+ Sbjct: 58 VDVTWKEGARDPRVFINPVVRDSGEDMRSMEEQCLSIPDLPMQVTRPTTLTLDWETPEGR 117 Query: 118 PFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 DG LA CI HE+DHL G + D+ SP ++ + Sbjct: 118 KTTGTFDGNLARCILHELDHLDGTVIFDHQSPARRAELEAAY 159 >UniRef50_A9B3X4 Peptide deformylase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3X4_HERA2 Length = 175 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 10/175 (5%) Query: 1 MSVLQVLHIPDERLRKVAKP-VEEVNAEIQRIVDDMFETMYAEE-----GIGLAATQVDI 54 M+V+ ++ + + LR+ A P + + E+ RI++DM +T+ G G+AA Q+ + Sbjct: 1 MAVVPLIELGNPLLRQPATPFADPTSPEVARILNDMRDTLADMRQRIGYGRGIAAPQIGV 60 Query: 55 HQRIIVIDVSENRDERLVLINPELLEKSGETGIE-EGCLSIPEQRALVPRAEKVKIRALD 113 +R+I+ID + LVL+NP S E E C S P LV R V + A Sbjct: 61 LKRLILIDTPDTN---LVLVNPRFERWSREEDERYESCFSFPGIWGLVQRPLGVTVVAYT 117 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 G+ +EA G L+ IQHEMDHL G +++D L Q+ EK + R Sbjct: 118 LAGEEQRIEASGSLSRIIQHEMDHLDGFVWLDRGPDLHSLCTTQEYEKRYISRER 172 >UniRef50_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJN4_ACIBL Length = 208 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 24/185 (12%) Query: 4 LQVLHIPDERLRKVAKPV---EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 L+++ + LR A+P+ E + EI R+++DM +T+ G+GLAA QV + ++ + Sbjct: 15 LKLVQAGEPVLRTPAEPLAIKEIASREIARLIEDMRDTLEDAPGVGLAAPQVGVPIQLAI 74 Query: 61 IDVSENRDE----------------RLVLINPELLEKSG-ETGIEEGCLSIPEQRALVPR 103 I+ + V+INP L + EGCLS+ A+VPR Sbjct: 75 IEDRAEYSKDIPTEQLAERGRVPVPFHVIINPVLKPLGKSQVDFFEGCLSVAGFIAVVPR 134 Query: 104 AEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 KV++ LD +G +EA G A +QHE+DHL G L++D + + + +E Sbjct: 135 YRKVRVTCLDENGAQRRIEASGWYARILQHEIDHLNGTLYVDRM----RSQTFASLENYA 190 Query: 164 RLKAR 168 R Sbjct: 191 RFLKH 195 >UniRef50_B3T9T4 Putative Polypeptide deformylase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9T4_9ZZZZ Length = 179 Score = 161 bits (408), Expect = 9e-39, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 8/167 (4%) Query: 1 MSVLQVLHIPDERLRKV-----AKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIH 55 M++ + ++PD+ LR A+ V+ + +QR++D+M E+M+ G+G+A+ QV Sbjct: 1 MAIRPLRYLPDQLLRTKTVSLRARDVQ--SPAVQRLIDEMIESMHHYNGVGIASNQVGSR 58 Query: 56 QRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 RI +I E VL+NP + + GE + EGCLS+P + + R+E+V + ALDR Sbjct: 59 YRICIIQRPEEDAVPFVLVNPRITRREGEREVTEGCLSLPGYQGGIVRSERVWVTALDRQ 118 Query: 116 GKPFELEAD-GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 GK +L + GLLA ++HE DHL G F+D+L + V++ Sbjct: 119 GKQVQLRGETGLLAQALEHETDHLDGVAFIDHLRSPDDLYEIRPVQE 165 >UniRef50_UPI0001C31BDE peptide deformylase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDE Length = 167 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 2/160 (1%) Query: 3 VLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVID 62 + V D L+ A V + +++ + M E M GIGLAATQ+ R++V Sbjct: 1 MRYVRQFGDPVLKSRAMTVSRFDDDLREQIRGMGEIMNDAFGIGLAATQLGKLNRVLVYR 60 Query: 63 VSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 V E + L+NPEL E EEGCLS+ V R V++RA D G + Sbjct: 61 V-EQDSPAIALVNPELEWSGDELETAEEGCLSLRGVLVDVERPVHVRVRAQDEQGSTVII 119 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 EA GL A IQHEMDHL G L +D S ++++ + + + Sbjct: 120 EASGLEARVIQHEMDHLDGVLILDRTSRDQRKQAMRALRE 159 >UniRef50_B6KT47 Peptide deformylase, putative n=3 Tax=Toxoplasma gondii RepID=B6KT47_TOXGO Length = 353 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 9/156 (5%) Query: 4 LQVLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 L VL P LR A P E + E + + D+ MY + G+GLAA QV + ++IV Sbjct: 185 LDVLAAPHTLLRLPAHP--EADWQAKETKELAKDLLAVMYRDGGVGLAAPQVGVSVQMIV 242 Query: 61 IDVSENRDE---RLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 + + + E V +NP LL G EGCLS+P A V R ++R +G Sbjct: 243 WNPTGDVRESSRERVFLNPRLLSLYGPLVSDVEGCLSVPGVFAPVERPLHARVRYTSLEG 302 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ 152 E GL A +QHE+DHL G LF+D + ++ Sbjct: 303 IQREATLSGLEARVVQHEIDHLHGILFVDRVHRGER 338 >UniRef50_Q6MDT4 Peptide deformylase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDT4_PARUW Length = 156 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 74/142 (52%), Gaps = 8/142 (5%) Query: 24 VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS-------ENRDERLVLINP 76 ++ +++++ DM ETM+ +GIGLAA QV + V V + V INP Sbjct: 4 IDDALKQLIYDMVETMHTMKGIGLAAPQVHHSISLFVTCVPVKNKNGLWESGKDRVFINP 63 Query: 77 ELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEM 135 ++L S E EGCLSIP V R K+ ++A+D +G FE GL A HE Sbjct: 64 QILSMSEETQTFSEGCLSIPNLHMNVTRPAKITVQAVDLEGNLFEEIFTGLQATNFMHEY 123 Query: 136 DHLVGKLFMDYLSPLKQQRIRQ 157 DHL G L +DY S +++ + Q Sbjct: 124 DHLNGILIIDYYSLEERKSLEQ 145 >UniRef50_Q8PGV2 Peptide deformylase 1 n=12 Tax=Proteobacteria RepID=DEF1_XANAC Length = 171 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 9/166 (5%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 + +++ + D+RL +VA PV + +AE+ +V DMFETM A G+GLAA Q+ + +++V Sbjct: 2 IREIIRMGDKRLLRVAPPVTNLGSAELHTLVADMFETMDAARGVGLAAPQIAVDLQLMVF 61 Query: 62 DVSENRDER-------LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALD 113 + L N ++ S + EGCLSIP RA++PR ++ R Sbjct: 62 GFDASERYPEAPAVPRTALANAQIEPLSEDMENGWEGCLSIPGLRAVIPRYRFIRYRGFA 121 Query: 114 RDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKV 159 DG P E +A+G A +QHE D+LVG+L+ + + Sbjct: 122 PDGSPIERDAEGFHARVVQHEYDNLVGRLYPSRIENFDTFGFEDVL 167 >UniRef50_A3M399 Peptide deformylase n=16 Tax=Acinetobacter RepID=A3M399_ACIBT Length = 160 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 12/160 (7%) Query: 1 MSV-LQVLHIPDERLRKVAKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 MSV L V ++ L+ +A PV + + ++ D M TM G+G+AA QV I + Sbjct: 1 MSVVLPVAKRGEDILKLIAAPVSANELNSNWLYQLADAMHATMLERNGVGIAAPQVYISK 60 Query: 57 RIIVIDVSENRDER-------LVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVK 108 RII++ N +V++NPE+LE S ET EEGCLS+P++R V RAE VK Sbjct: 61 RIIIVASRPNPRYPDAPEMNAVVMVNPEILEFSSETCLGEEGCLSVPDERGQVERAEMVK 120 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS 148 ++ L G+ E G A +QHE+DHL G LF++ +S Sbjct: 121 VKYLTLQGEAVETIFHGFPARIVQHEVDHLNGILFVERIS 160 >UniRef50_UPI0001C30F16 peptide deformylase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F16 Length = 190 Score = 158 bits (400), Expect = 7e-38, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 ++ D LR A+PVE + + ++ + + G GLAA Q+ + R++V V Sbjct: 22 EIRLWGDPVLRASARPVERFDDGLADLITRLRWVIDDATGAGLAAPQLGVLVRVVVYRVP 81 Query: 65 ENR--DERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL 121 + VL+NP ++ +S T EGCLS+P A V R V + A D G+ E+ Sbjct: 82 DEERDGPARVLVNPAIVVRSAERTTFVEGCLSMPGIVAPVERCANVVVHACDEHGRAREI 141 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR 164 A G A +QHE+DHL G L D L+P ++ + V R Sbjct: 142 AAAGDHASVLQHELDHLDGVLLPDRLTPEHRRSYVRAVHDAAR 184 >UniRef50_D2PP12 Peptide deformylase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PP12_9ACTO Length = 240 Score = 158 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 15/163 (9%) Query: 3 VLQVLHIPDERLRKVAKPVE-EVNAEI-QRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 V ++ + D LR+ A+P + + + + + V+ + TM A G+GLAA QV + RI V Sbjct: 49 VAPIVQLGDPVLRRKAEPFDGQFDDGLLKDFVELLRRTMLAAPGVGLAAPQVGVPLRIAV 108 Query: 61 IDVS------------ENRDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKV 107 ++ E L ++NPE + + G EGCLS+P +V R KV Sbjct: 109 LEDPATVSAEVAEARERYPLEFLAVLNPEYAPRGRDKRGFYEGCLSMPGFTGVVSRPLKV 168 Query: 108 KIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 D G L G A QHE DHL G+L++D + P Sbjct: 169 DAGYSDLTGARRRLTLSGWQARIFQHETDHLNGRLYVDQVEPR 211 >UniRef50_Q2RVK0 Peptide deformylase n=2 Tax=Rhodospirillales RepID=Q2RVK0_RHORT Length = 169 Score = 158 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 81/166 (48%), Gaps = 9/166 (5%) Query: 12 ERLRKVAKPV-EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER 70 L +A+PV + + +I R+V DM ET+ G+GLAA QV + R+++ V NR Sbjct: 2 PVLAGIARPVEDPTDPKIHRLVADMIETLADSGGVGLAAPQVHVPLRVMIFHVPANRSTE 61 Query: 71 -------LVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELE 122 VLINP+L E EGCLS+P LVPR ++ R +D DG+ E E Sbjct: 62 AEGAVPLTVLINPQLTPLGEEMVEDWEGCLSLPGLTGLVPRYRSLRYRGVDLDGREVERE 121 Query: 123 ADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKAR 168 A A +QHE DHL G L+ L Q +++ K Sbjct: 122 ARDFHARVVQHEYDHLDGVLYPRRLRDPSQFGFVEEIRKALAANRE 167 >UniRef50_B6RGY0 Peptide deformylase 1A, chloroplastic n=3 Tax=Magnoliophyta RepID=DEF1A_ORYSJ Length = 260 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 21/172 (12%) Query: 1 MSVLQ-VLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQ 56 M+V + D L + A+ V + ++Q ++D M M G+GLAA Q+ + Sbjct: 68 MTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPL 127 Query: 57 RIIVIDVSEN----------------RDERLVLINPELLEKSGETG-IEEGCLSIPEQRA 99 +IIV++ ++ + LV+INP+L S T EGCLS+ RA Sbjct: 128 KIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRA 187 Query: 100 LVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 LV R V++ LDR+G+P ++EA G A +QHE DHL G L++D + P Sbjct: 188 LVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVPRT 239 >UniRef50_B5YLS0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YLS0_THAPS Length = 192 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%) Query: 6 VLHIPDERLRK-VAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 + P LR+ P+ + + Q +M MY +G+GLAA Q+ +++ + V + S Sbjct: 15 ITEYPRPALRRVPNTPISQFDDAFQTKAKEMLMIMYESKGVGLAAPQIGLNENVFVYNPS 74 Query: 65 ENRDERLVLINPELLEKSGETGIE-EGCLSI--PEQRALVPRAEKVKIRALDRDGKPFEL 121 ++++ ++ NP++ + S E +E EGCLS+ E V R+ ++ + +G+ Sbjct: 75 DSKNMERIVCNPKITKYSEEVIVEQEGCLSMRSDEVAGQVARSAWIECEYENEEGQKVRR 134 Query: 122 EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL 162 A QHE DHL G L D P ++ ++ + L Sbjct: 135 RLKDFEARVFQHEYDHLKGILCYDRFPPEDREAAQENINTL 175 >UniRef50_Q057D2 Peptide deformylase n=2 Tax=Buchnera aphidicola (Cinara cedri) RepID=DEF_BUCCC Length = 149 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 73/149 (48%), Positives = 109/149 (73%), Gaps = 1/149 (0%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MS+ ++L PD RLR ++KP++ +N + ++I+ DMF+TMYA GIGLAA Q++I ++IIV Sbjct: 1 MSIRKILQFPDYRLRLLSKPIKIINKKTKKIIYDMFDTMYANNGIGLAAPQINILKQIIV 60 Query: 61 IDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 I + LVLINP +L+K+ + EGCLSIP++ A + R+ +KI+A++ GK F Sbjct: 61 ISSLKPTMSELVLINPVILKKNKKYINTIEGCLSIPKKTAKIKRSSCIKIQAINTYGKSF 120 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLS 148 L A LL+ICIQHE+DHL+GKLF+DY++ Sbjct: 121 TLTAKSLLSICIQHEIDHLIGKLFIDYIN 149 >UniRef50_Q825U9 Peptide deformylase 3 n=6 Tax=Actinomycetales RepID=DEF3_STRAW Length = 224 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 15/158 (9%) Query: 4 LQVLHIPDERLRKVAKPVE-EVNAEI-QRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L ++ D LR+ A+P + ++ + R V+ + TM+A G+GLAA QV + RI VI Sbjct: 33 LPIVAAGDPVLRRGAEPYDGQLGPGLLARFVEALRLTMHAAPGVGLAAPQVGVGLRIAVI 92 Query: 62 D----VSENRD--------ERLVLINPELLE-KSGETGIEEGCLSIPEQRALVPRAEKVK 108 + V E VL+NP S EGCLS+P +A+V R +V+ Sbjct: 93 EDPAPVPEEVGAVRGRVPQPFRVLVNPSYEAVGSDRAAFFEGCLSVPGWQAVVARPARVR 152 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY 146 + ALD G+ + E G A +QHE DHL G L++D Sbjct: 153 LTALDEHGRAVDEEFTGWPARIVQHETDHLDGMLYLDR 190 >UniRef50_D2MKZ1 Formylmethionine deformylase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKZ1_9BACT Length = 160 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 5/153 (3%) Query: 18 AKPVEEV---NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDER-LVL 73 A+PV+ + Q+ +DDMFETM A EGIGLAA QV +++IV+ VL Sbjct: 2 AEPVDPAIIPSRAYQQFIDDMFETMDAYEGIGLAAPQVSRSEQLIVMRCDGQDAIPETVL 61 Query: 74 INPELLEKSG-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQ 132 INP ++ + + EGCLS+ R V R ++++ALDR+G+ + EA GL +CIQ Sbjct: 62 INPRIVFYGPAQAEMWEGCLSVDGLRGKVTRPSSIRVQALDREGRSVDFEASGLFGVCIQ 121 Query: 133 HEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL 165 HEMDHL+GKLF+D ++ L ++ + + Sbjct: 122 HEMDHLIGKLFLDRMTDLSSLTQLKEFDVYWKQ 154 >UniRef50_B5G8K4 Peptide deformylase n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8K4_9ACTO Length = 216 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 6/167 (3%) Query: 3 VLQVLHIPDERLRKVAKPVEEV-NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 +L+V + +E L + + R+V DMF TMY EG GLAA QV + R+ V Sbjct: 24 MLRVTEVGEEILARRCAEATVFGTPGLARLVADMFLTMYLAEGAGLAANQVGVDLRLFVY 83 Query: 62 DVSENRDERLV--LINPEL-LEKSGE--TGIEEGCLSIPEQRALVPRAEKVKIRALDRDG 116 D ++ R V ++N + SG EGCLS+P R + RA++ +R +DRDG Sbjct: 84 DRFDDEGARHVGHVLNRVIDEAASGRALVEDVEGCLSVPGARHGLARADRTVLRGVDRDG 143 Query: 117 KPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD 163 +P +E G A C+QHE DHL G +++D L ++ + + + Sbjct: 144 RPVTIEGTGYFARCLQHETDHLNGMVYVDRLGKRARRAVLADMAEAR 190 >UniRef50_C6HZ73 Peptide deformylase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ73_9BACT Length = 175 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 5/155 (3%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 MSV ++ D LR ++PV+ E++++V D+F+T+ ++G+ +AA Q+ + R+ V Sbjct: 1 MSVRPLVSHRDTVLRIASEPVDPCAPEVRQVVQDLFDTLATQKGVAMAAPQIGVAMRLFV 60 Query: 61 IDV--SENRDER---LVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRD 115 D+ + +LINP + + G + EGCLS P + R E V + D Sbjct: 61 FDLKRPREKGGPPTRGLLINPTIERRFGSIPVIEGCLSFPGLDLSIRRPEGVVVSGYGLD 120 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPL 150 GK LE GL A ++HE DHL G+L D + L Sbjct: 121 GKKVVLEGGGLFARMVEHETDHLEGRLLPDRQNGL 155 >UniRef50_Q1Z8Z7 Peptide deformylase n=2 Tax=Photobacterium profundum RepID=Q1Z8Z7_PHOPR Length = 178 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 11/160 (6%) Query: 2 SVLQVLHIPDERLRKVAKPV--EEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRII 59 + L+++ + + LR A+ + ++N + ++ + + M + +G+G+AA QV R Sbjct: 3 ASLEIIQLGNPLLRVPAEALSTTQINVTLP-LLASLEQIMLSHQGVGIAAPQVGESLRAF 61 Query: 60 VIDVSENRD-------ERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRA 111 ++ N E ++INPELL S EGCLSIP RA + R +++ Sbjct: 62 IVASRPNDRYPHAPLMEPTIMINPELLWHSDLMEKDWEGCLSIPGIRAKINRYTHIRVSY 121 Query: 112 LDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 L+ G E E +A QHE+DHL G +F+D L Sbjct: 122 LNVLGDVIETEFTDFIARIFQHELDHLNGIVFLDRADKLD 161 >UniRef50_A2SPY2 Peptide deformylase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SPY2_METLZ Length = 157 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 3/157 (1%) Query: 5 QVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVS 64 ++ D L A+ V+ + I+ +M++TM + IGL+A Q+ + +R+ +++ Sbjct: 4 EIRKYGDPVLFLHAETVQNIGPLELEILTNMWDTMIHNKCIGLSAPQIGVSKRLFIVNAG 63 Query: 65 ENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEAD 124 + NPE+L++ EG IP + V R K+ R LD G+ E E Sbjct: 64 ---GVTIKGANPEVLKEGALVEEMEGSPCIPGIQRPVRRPGKITCRYLDISGETIETELK 120 Query: 125 GLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK 161 G+ A HE DH G L++D+L P++++ I + +EK Sbjct: 121 GIAARAFLHEKDHHEGILYLDHLKPIQKRMILKSLEK 157 >UniRef50_Q8XJX0 Peptide deformylase 2 n=8 Tax=Clostridium perfringens RepID=DEF2_CLOPE Length = 155 Score = 155 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 95/152 (62%), Gaps = 3/152 (1%) Query: 1 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 M+V +++ I E L+KV++PV++VN E++ ++ D+ +T+ EGIGLAA Q+ +++R++ Sbjct: 1 MAVKKIVQIGHEALKKVSEPVKDVN-EVKGLIQDLKDTLATVEGIGLAAPQIAVNKRVVY 59 Query: 61 IDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPF 119 I+ + +E VLINPE+ S ET EGCLS LV R V+I+AL+ G+ Sbjct: 60 INFGDGENE-YVLINPEVTGVSKETYEDYEGCLSYVMHEGLVERPRAVRIQALNEKGELK 118 Query: 120 ELEADGLLAICIQHEMDHLVGKLFMDYLSPLK 151 EA LLA C HE+DHL G +++D + Sbjct: 119 VYEAQDLLARCFLHEIDHLEGIMYVDRAKEMY 150 >UniRef50_Q8EHZ2 Peptide deformylase 2 n=14 Tax=Shewanella RepID=DEF2_SHEON Length = 181 Score = 154 bits (391), Expect = 8e-37, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 8/163 (4%) Query: 4 LQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDV 63 L + + + L++ A V + + + ++ M +M +G+G+AA QV + ++ Sbjct: 14 LPIAVVGEAILKQQAIEVRDFDDTLSQLASQMAASMVEAKGVGIAAPQVHSPLALFIMAS 73 Query: 64 SENRD-------ERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRD 115 N E LV++NP+++ +S + EEGCLS+P QR + R + + +R + Sbjct: 74 RPNERYPDAPLMEPLVVVNPQIVLRSLQLEKGEEGCLSVPGQRFTIWRPQTIVVRYQNLA 133 Query: 116 GKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 G+ E G +A QHE DHL G ++ +Q+ + Q+ Sbjct: 134 GQWQHSELTGFIARIFQHEFDHLQGITLLERSQMPEQKLMAQE 176 >UniRef50_Q4V5F8 IP07194p (Fragment) n=9 Tax=Drosophila RepID=Q4V5F8_DROME Length = 206 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 20/175 (11%) Query: 4 LQVLHIPDERLRKVAKPVEEVN---AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV 60 I D LR+ A+ V + EI +I+D M + + + +G+AA QV I RIIV Sbjct: 17 RHFTQIGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGIPLRIIV 76 Query: 61 IDVSENRDERL----------------VLINPELLEKSGET-GIEEGCLSIPEQRALVPR 103 ++ E + E+ V INPEL S + EGC+S+ A V R Sbjct: 77 MEFREGKQEQFKPEIYEERKMSILPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVER 136 Query: 104 AEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQK 158 +KV+IR + + G P E+E +G A QHE+DHL G ++MD + I + Sbjct: 137 YDKVRIRGIGKLGTPSEMELEGWNARIAQHEVDHLNGTIYMDRMDLSTFNCILWE 191 >UniRef50_Q9RD27 Peptide deformylase 1 n=10 Tax=Actinomycetales RepID=DEF1_STRCO Length = 218 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 17/173 (9%) Query: 4 LQVLHIPDERLRKVAKPVE-EVNAEI-QRIVDDMFETMYAEEGIGLAATQVDIHQRIIVI 61 L ++ D LR+ A+P + +V + +R V+ + TM+A G+GLAA QV + R+ VI Sbjct: 24 LPIVAAGDPVLRRAAEPYDGQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVI 83 Query: 62 D----VSEN--------RDERLVLINPELLEKS-GETGIEEGCLSIPEQRALVPRAEKVK 108 + V + VL+NP G EGCLS+P +A+V R +V+ Sbjct: 84 EDPAPVPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHAEVR 143 Query: 109 IRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDY--LSPLKQQRIRQKV 159 +RA D G+ + G A +QHE DHL G L++D L L ++ Sbjct: 144 LRAHDEHGRAVDEVFAGWPARIVQHETDHLDGTLYLDRAELRSLASNAAMAEL 196 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.160 0.493 Lambda K H 0.267 0.0494 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,327,767,839 Number of Sequences: 3077464 Number of extensions: 72842002 Number of successful extensions: 180344 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1072 Number of HSP's successfully gapped in prelim test: 56 Number of HSP's that attempted gapping in prelim test: 177366 Number of HSP's gapped (non-prelim): 1148 length of query: 169 length of database: 1,040,396,356 effective HSP length: 119 effective length of query: 50 effective length of database: 674,178,140 effective search space: 33708907000 effective search space used: 33708907000 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 89 (38.6 bits)