Phyre 2 Results for P0AC69

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Email | l.a.kelley@imperial.ac.uk
Description | P0AC69
Date | Thu Jan 5 11:17:25 GMT 2012
Unique Job ID | 705c441946b6a2d8

Summary |

Top model
Image coloured by rainbow N → C terminus
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Model (left) based on template c1ykaA_
Top template information
PDB header:electron transport Chain: A: PDB Molecule:monothiol glutaredoxin ydhd; PDBTitle: solution structure of grx4, a monothiol glutaredoxin from2 e. coli.
Confidence and coverage
Confidence: | 100.0% | Coverage: | 100%
115 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | S | T | T | I | E | K | I | Q | R | Q | I | A | E | N | P | I | L | L | Y | M | K | G | S | P | K | L | P | S | C | G | F | S | A | Q | A | V | Q | A | L | A | A | C | G | E | R | F | A | Y | V | D | I | L | Q | N | P | D | I | R | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | .
Sequence |  | E | L | P | K | Y | A | N | W | P | T | F | P | Q | L | W | V | D | G | E | L | V | G | G | C | D | I | V | I | E | M | Y | Q | R | G | E | L | Q | Q | L | I | K | E | T | A | A | K | Y | K | S | E | E | P | D | A | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c1ykaA_ |

### PDB 1yka chain A

Region: 1 - 115
Aligned: 115
Modelled: 115
Confidence: 100.0%
Identity: 100%
PDB header:electron transport
Chain: A: PDB Molecule:monothiol glutaredoxin ydhd;
PDBTitle: solution structure of grx4, a monothiol glutaredoxin from2 e. coli.

Phyre2
2 |
| c2wulB_ |

### PDB 2wul chain B

Region: 6 - 108
Aligned: 103
Modelled: 103
Confidence: 100.0%
Identity: 36%
PDB header:oxidoreductase
Chain: B: PDB Molecule:glutaredoxin related protein 5;
PDBTitle: crystal structure of the human glutaredoxin 5 with bound2 glutathione in an fes cluster

Phyre2
3 |
| c3ipzA_ |

### PDB 3ipz chain A

Region: 2 - 105
Aligned: 104
Modelled: 104
Confidence: 100.0%
Identity: 38%
PDB header:electron transport, oxidoreductase
Chain: A: PDB Molecule:monothiol glutaredoxin-s14, chloroplastic;
PDBTitle: crystal structure of arabidopsis monothiol glutaredoxin atgrxcp

Phyre2
4 |
| c3gx8A_ |

### PDB 3gx8 chain A

Region: 2 - 108
Aligned: 107
Modelled: 107
Confidence: 100.0%
Identity: 36%
PDB header:electron transport
Chain: A: PDB Molecule:monothiol glutaredoxin-5, mitochondrial;
PDBTitle: structural and biochemical characterization of yeast2 monothiol glutaredoxin grx5

Phyre2
5 |
| d1wika_ |

### PDB 1wik chain A

Region: 2 - 106
Aligned: 105
Modelled: 105
Confidence: 100.0%
Identity: 36%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2
6 |
| c2e7pC_ |

### PDB 2e7p chain C

Region: 1 - 112
Aligned: 107
Modelled: 112
Confidence: 100.0%
Identity: 26%
PDB header:electron transport
Chain: C: PDB Molecule:glutaredoxin;
PDBTitle: crystal structure of the holo form of glutaredoxin c1 from populus2 tremula x tremuloides

Phyre2
7 |
| c3fzaA_ |

### PDB 3fza chain A

Region: 2 - 106
Aligned: 100
Modelled: 105
Confidence: 100.0%
Identity: 28%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: crystal structure of poplar glutaredoxin s12 in complex with2 glutathione and beta-mercaptoethanol

Phyre2
8 |
| c2ht9A_ |

### PDB 2ht9 chain A

Region: 2 - 104
Aligned: 98
Modelled: 103
Confidence: 100.0%
Identity: 21%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin-2;
PDBTitle: the structure of dimeric human glutaredoxin 2

Phyre2
9 |
| c2jadA_ |

### PDB 2jad chain A

Region: 2 - 103
Aligned: 97
Modelled: 102
Confidence: 99.9%
Identity: 28%
PDB header:electron transport
Chain: A: PDB Molecule:yellow fluorescent protein glutaredoxin fusion
PDBTitle: yellow fluorescent protein - glutaredoxin fusion protein

Phyre2
10 |
| c3h8qB_ |

### PDB 3h8q chain B

Region: 2 - 108
Aligned: 102
Modelled: 107
Confidence: 99.9%
Identity: 25%
PDB header:oxidoreductase
Chain: B: PDB Molecule:thioredoxin reductase 3;
PDBTitle: crystal structure of glutaredoxin domain of human thioredoxin2 reductase 3

Phyre2
11 |
| c3l4nA_ |

### PDB 3l4n chain A

Region: 3 - 104
Aligned: 97
Modelled: 102
Confidence: 99.9%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:monothiol glutaredoxin-6;
PDBTitle: crystal structure of yeast monothiol glutaredoxin grx6

Phyre2
12 |
| c2hzfA_ |

### PDB 2hzf chain A

Region: 2 - 105
Aligned: 99
Modelled: 104
Confidence: 99.9%
Identity: 21%
PDB header:electron transport, oxidoreductase
Chain: A: PDB Molecule:glutaredoxin-1;
PDBTitle: crystal structures of a poxviral glutaredoxin in the oxidized and2 reduced states show redox-correlated structural changes

Phyre2
13 |
| d1jhba_ |

### PDB 1jhb chain A

Region: 4 - 105
Aligned: 97
Modelled: 102
Confidence: 99.9%
Identity: 25%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2
14 |
| d1ktea_ |

### PDB 1kte chain A

Region: 4 - 105
Aligned: 97
Modelled: 102
Confidence: 99.9%
Identity: 22%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2
15 |
| c3c1sA_ |

### PDB 3c1s chain A

Region: 1 - 103
Aligned: 98
Modelled: 103
Confidence: 99.9%
Identity: 29%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin-1;
PDBTitle: crystal structure of grx1 in glutathionylated form

Phyre2
16 |
| c2jacA_ |

### PDB 2jac chain A

Region: 2 - 103
Aligned: 97
Modelled: 102
Confidence: 99.9%
Identity: 32%
PDB header:electron transport
Chain: A: PDB Molecule:glutaredoxin-1;
PDBTitle: glutaredoxin grx1p c30s mutant from yeast

Phyre2
17 |
| c3d5jB_ |

### PDB 3d5j chain B

Region: 2 - 103
Aligned: 97
Modelled: 102
Confidence: 99.9%
Identity: 18%
PDB header:oxidoreductase
Chain: B: PDB Molecule:glutaredoxin-2, mitochondrial;
PDBTitle: structure of yeast grx2-c30s mutant with glutathionyl mixed2 disulfide

Phyre2
18 |
| c2khpA_ |

### PDB 2khp chain A

Region: 15 - 104
Aligned: 85
Modelled: 90
Confidence: 99.9%
Identity: 32%
PDB header:electron transport
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: solution structure of glutaredoxin from brucella melitensis

Phyre2
19 |
| c2klxA_ |

### PDB 2klx chain A

Region: 15 - 104
Aligned: 84
Modelled: 85
Confidence: 99.9%
Identity: 25%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: solution structure of glutaredoxin from bartonella henselae str.2 houston

Phyre2
20 |
| d1fova_ |

### PDB 1fov chain A

Region: 15 - 101
Aligned: 82
Modelled: 82
Confidence: 99.9%
Identity: 30%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Thioltransferase

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1ykaA_ |
|  | 100.0 | 100 | PDB header:electron transport Chain: A: PDB Molecule:monothiol glutaredoxin ydhd; PDBTitle: solution structure of grx4, a monothiol glutaredoxin from2 e. coli.
2 | c2wulB_ |
|  | 100.0 | 36 | PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin related protein 5; PDBTitle: crystal structure of the human glutaredoxin 5 with bound2 glutathione in an fes cluster
3 | c3ipzA_ |
|  | 100.0 | 38 | PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-s14, chloroplastic; PDBTitle: crystal structure of arabidopsis monothiol glutaredoxin atgrxcp
4 | c3gx8A_ |
|  | 100.0 | 36 | PDB header:electron transport Chain: A: PDB Molecule:monothiol glutaredoxin-5, mitochondrial; PDBTitle: structural and biochemical characterization of yeast2 monothiol glutaredoxin grx5
5 | d1wika_ |
|  | 100.0 | 36 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
6 | c2e7pC_ |
|  | 100.0 | 26 | PDB header:electron transport Chain: C: PDB Molecule:glutaredoxin; PDBTitle: crystal structure of the holo form of glutaredoxin c1 from populus2 tremula x tremuloides
7 | c3fzaA_ |
|  | 100.0 | 28 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: crystal structure of poplar glutaredoxin s12 in complex with2 glutathione and beta-mercaptoethanol
8 | c2ht9A_ |
|  | 100.0 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin-2; PDBTitle: the structure of dimeric human glutaredoxin 2
9 | c2jadA_ |
|  | 99.9 | 28 | PDB header:electron transport Chain: A: PDB Molecule:yellow fluorescent protein glutaredoxin fusion PDBTitle: yellow fluorescent protein - glutaredoxin fusion protein
10 | c3h8qB_ |
|  | 99.9 | 25 | PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 3; PDBTitle: crystal structure of glutaredoxin domain of human thioredoxin2 reductase 3
11 | c3l4nA_ |
|  | 99.9 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:monothiol glutaredoxin-6; PDBTitle: crystal structure of yeast monothiol glutaredoxin grx6
12 | c2hzfA_ |
|  | 99.9 | 21 | PDB header:electron transport, oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structures of a poxviral glutaredoxin in the oxidized and2 reduced states show redox-correlated structural changes
13 | d1jhba_ |
|  | 99.9 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
14 | d1ktea_ |
|  | 99.9 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
15 | c3c1sA_ |
|  | 99.9 | 29 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: crystal structure of grx1 in glutathionylated form
16 | c2jacA_ |
|  | 99.9 | 32 | PDB header:electron transport Chain: A: PDB Molecule:glutaredoxin-1; PDBTitle: glutaredoxin grx1p c30s mutant from yeast
17 | c3d5jB_ |
|  | 99.9 | 18 | PDB header:oxidoreductase Chain: B: PDB Molecule:glutaredoxin-2, mitochondrial; PDBTitle: structure of yeast grx2-c30s mutant with glutathionyl mixed2 disulfide
18 | c2khpA_ |
|  | 99.9 | 32 | PDB header:electron transport Chain: A: PDB Molecule:glutaredoxin; PDBTitle: solution structure of glutaredoxin from brucella melitensis
19 | c2klxA_ |
|  | 99.9 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: solution structure of glutaredoxin from bartonella henselae str.2 houston
20 | d1fova_ |
|  | 99.9 | 30 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
21 | d1t1va_ |
| not modelled | 99.8 | 23 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:SH3BGR (SH3-binding, glutamic acid-rich protein-like)
22 | c3lgcA_ |
| not modelled | 99.8 | 17 | PDB header:unknown function Chain: A: PDB Molecule:glutaredoxin 1; PDBTitle: crystal structure of glutaredoxin 1 from francisella2 tularensis
23 | c2ct6A_ |
| not modelled | 99.8 | 20 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sh3 domain-binding glutamic acid-rich-like PDBTitle: solution structure of the sh3 domain-binding glutamic acid-2 rich-like protein 2
24 | c1nm3B_ |
| not modelled | 99.8 | 25 | PDB header:electron transport Chain: B: PDB Molecule:protein hi0572; PDBTitle: crystal structure of heamophilus influenza hybrid-prx5
25 | c1u6tA_ |
| not modelled | 99.8 | 20 | PDB header:protein binding, signaling protein Chain: A: PDB Molecule:sh3 domain-binding glutamic acid-rich-like PDBTitle: crystal structure of the human sh3 binding glutamic-rich2 protein like
26 | d1nm3a1 |
| not modelled | 99.8 | 27 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
27 | d1abaa_ |
| not modelled | 99.7 | 21 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
28 | d1egoa_ |
| not modelled | 99.7 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
29 | c3ic4A_ |
| not modelled | 99.6 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin (grx-1); PDBTitle: the crystal structure of the glutaredoxin(grx-1) from archaeoglobus2 fulgidus
30 | c3nznA_ |
| not modelled | 99.6 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: the crystal structure of the glutaredoxin from methanosarcina mazei2 go1
31 | d1r7ha_ |
| not modelled | 99.6 | 29 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
32 | d1h75a_ |
| not modelled | 99.5 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
33 | c2v6oA_ |
| not modelled | 99.1 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr)
34 | d1hyua4 |
| not modelled | 98.5 | 21 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
35 | d1oyja2 |
| not modelled | 98.4 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
36 | d1wjka_ |
| not modelled | 98.4 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
37 | c1zypB_ |
| not modelled | 98.4 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: synchrotron reduced form of the n-terminal domain of2 salmonella typhimurium ahpf
38 | d1g7oa2 |
| not modelled | 98.3 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
39 | d1k0ma2 |
| not modelled | 98.2 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
40 | d1gwca2 |
| not modelled | 98.2 | 18 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
41 | d1eema2 |
| not modelled | 98.1 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
42 | c1k0nB_ |
| not modelled | 98.1 | 18 | PDB header:metal transport Chain: B: PDB Molecule:chloride intracellular channel protein 1; PDBTitle: chloride intracellular channel 1 (clic1) complexed with glutathione
43 | c3ic8D_ |
| not modelled | 98.0 | 14 | PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized gst-like proteinprotein; PDBTitle: the crystal structure of a gst-like protein from pseudomonas syringae2 to 2.4a
44 | c1g7oA_ |
| not modelled | 98.0 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin 2; PDBTitle: nmr solution structure of reduced e. coli glutaredoxin 2
45 | c3lykA_ |
| not modelled | 98.0 | 15 | PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae
46 | c1hyuA_ |
| not modelled | 98.0 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: crystal structure of intact ahpf
47 | c2aheA_ |
| not modelled | 98.0 | 19 | PDB header:metal transport Chain: A: PDB Molecule:chloride intracellular channel protein 4; PDBTitle: crystal structure of a soluble form of clic4. intercellular2 chloride ion channel
48 | c1oyjC_ |
| not modelled | 98.0 | 17 | PDB header:transferase Chain: C: PDB Molecule:glutathione s-transferase; PDBTitle: crystal structure solution of rice gst1 (osgstu1) in complex with2 glutathione.
49 | c1z9hB_ |
| not modelled | 97.8 | 16 | PDB header:isomerase Chain: B: PDB Molecule:membrane-associated prostaglandin e synthase-2; PDBTitle: microsomal prostaglandin e synthase type-2
50 | c2fgxA_ |
| not modelled | 97.8 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: solution nmr structure of protein ne2328 from nitrosomonas2 europaea. northeast structural genomics consortium target3 net3.
51 | c3fy7B_ |
| not modelled | 97.8 | 17 | PDB header:transport protein Chain: B: PDB Molecule:chloride intracellular channel protein 3; PDBTitle: crystal structure of homo sapiens clic3
52 | d1e6ba2 |
| not modelled | 97.8 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
53 | c2vo4A_ |
| not modelled | 97.8 | 16 | PDB header:transferase Chain: A: PDB Molecule:2,4-d inducible glutathione s-transferase; PDBTitle: glutathione transferase from glycine max
54 | c1gwcC_ |
| not modelled | 97.8 | 18 | PDB header:transferase Chain: C: PDB Molecule:glutathione s-transferase tsi-1; PDBTitle: the structure of a tau class glutathione s-transferase from2 wheat, active in herbicide detoxification
55 | c2r4vA_ |
| not modelled | 97.7 | 24 | PDB header:transport protein Chain: A: PDB Molecule:chloride intracellular channel protein 2; PDBTitle: structure of human clic2, crystal form a
56 | c1yy7A_ |
| not modelled | 97.6 | 20 | PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: crystal structure of stringent starvation protein a (sspa),2 an rna polymerase-associated transcription factor
57 | d1pn9a2 |
| not modelled | 97.6 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
58 | d1fw1a2 |
| not modelled | 97.6 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
59 | d1z9ha2 |
| not modelled | 97.6 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
60 | c3kp8A_ |
| not modelled | 97.6 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: the thioredoxin-like domain of a vkor homolog from2 synechococcus sp.
61 | d1v2aa2 |
| not modelled | 97.5 | 18 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
62 | d1aw9a2 |
| not modelled | 97.5 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
63 | d1axda2 |
| not modelled | 97.5 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
64 | d1zmaa1 |
| not modelled | 97.5 | 13 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
65 | c3kp9A_ |
| not modelled | 97.5 | 14 | PDB header:blood coagulation,oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: structure of a bacterial homolog of vitamin k epoxide reductase
66 | d1ljra2 |
| not modelled | 97.4 | 8 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
67 | d1rk4a2 |
| not modelled | 97.4 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
68 | d1k0da2 |
| not modelled | 97.4 | 11 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
69 | c1xbsA_ |
| not modelled | 97.4 | 16 | PDB header:transcription, cell cycle Chain: A: PDB Molecule:dim1-like protein; PDBTitle: crystal structure of human dim2: a dim1-like protein
70 | d1nhoa_ |
| not modelled | 97.4 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
71 | d1ttza_ |
| not modelled | 97.3 | 26 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
72 | d1gnwa2 |
| not modelled | 97.3 | 10 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
73 | c1k0dB_ |
| not modelled | 97.3 | 14 | PDB header:gene regulation Chain: B: PDB Molecule:ure2 protein; PDBTitle: ure2p in complex with glutathione
74 | c3l78A_ |
| not modelled | 97.3 | 26 | PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159
75 | d1j08a1 |
| not modelled | 97.3 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
76 | c3bbyA_ |
| not modelled | 97.3 | 23 | PDB header:transferase Chain: A: PDB Molecule:uncharacterized gst-like protein yfcf; PDBTitle: crystal structure of glutathione s-transferase (np_416804.1) from2 escherichia coli k12 at 1.85 a resolution
77 | c1eemA_ |
| not modelled | 97.3 | 19 | PDB header:transferase Chain: A: PDB Molecule:glutathione-s-transferase; PDBTitle: glutathione transferase from homo sapiens
78 | d1z3ea1 |
| not modelled | 97.2 | 24 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like
79 | d1j08a2 |
| not modelled | 97.1 | 22 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
80 | c1byeA_ |
| not modelled | 97.1 | 15 | PDB header:transferase Chain: A: PDB Molecule:protein (glutathione s-transferase); PDBTitle: glutathione s-transferase i from mais in complex with2 atrazine glutathione conjugate
81 | d1k0dd2 |
| not modelled | 97.1 | 12 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
82 | c2l6dA_ |
| not modelled | 97.1 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of desulfothioredoxin from desulfovibrio vulgaris2 hildenborough in its reduced form
83 | d1jlva2 |
| not modelled | 97.1 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
84 | c2l57A_ |
| not modelled | 97.1 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens
85 | c3rbtD_ |
| not modelled | 97.1 | 9 | PDB header:transferase Chain: D: PDB Molecule:glutathione transferase o1; PDBTitle: crystal structure of glutathione s-transferase omega 3 from the2 silkworm bombyx mori
86 | c3lypA_ |
| not modelled | 97.1 | 21 | PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: structure of stringent starvation protein a homolog from pseudomonas2 fluorescens
87 | c3nivD_ |
| not modelled | 97.1 | 16 | PDB header:isomerase Chain: D: PDB Molecule:glutathione s-transferase; PDBTitle: the crystal structure of glutathione s-transferase from legionella2 pneumophila
88 | c1r5aA_ |
| not modelled | 97.1 | 10 | PDB header:transferase Chain: A: PDB Molecule:glutathione transferase; PDBTitle: glutathione s-transferase
89 | c3gkxB_ |
| not modelled | 97.0 | 17 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative arsc family related protein; PDBTitle: crystal structure of putative arsc family related protein from2 bacteroides fragilis
90 | d1iloa_ |
| not modelled | 97.0 | 31 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
91 | d1jlwa2 |
| not modelled | 97.0 | 17 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
92 | c3fz4A_ |
| not modelled | 97.0 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative arsenate reductase; PDBTitle: the crystal structure of a possible arsenate reductase from2 streptococcus mutans ua159
93 | c1zl9A_ |
| not modelled | 97.0 | 17 | PDB header:transferase Chain: A: PDB Molecule:glutathione s-transferase 5; PDBTitle: crystal structure of a major nematode c.elegans specific gst (ce01613)
94 | d1woua_ |
| not modelled | 96.9 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like
95 | c2hlsB_ |
| not modelled | 96.9 | 22 | PDB header:oxidoreductase Chain: B: PDB Molecule:protein disulfide oxidoreductase; PDBTitle: the crystal structure of a protein disulfide oxidoreductase from2 aeropyrum pernix k1
96 | c2jl4A_ |
| not modelled | 96.9 | 18 | PDB header:isomerase Chain: A: PDB Molecule:maleylpyruvate isomerase; PDBTitle: holo structure of maleyl pyruvate isomerase, a bacterial2 glutathione-s-transferase in zeta class
97 | d1r26a_ |
| not modelled | 96.9 | 13 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
98 | c2vm2C_ |
| not modelled | 96.9 | 19 | PDB header:oxidoreductase Chain: C: PDB Molecule:thioredoxin h isoform 1.; PDBTitle: crystal structure of barley thioredoxin h isoform 12 crystallized using peg as precipitant
99 | d1a8la2 |
| not modelled | 96.8 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
100 | c3lxzD_ |
| not modelled | 96.8 | 13 | PDB header:transferase Chain: D: PDB Molecule:glutathione s-transferase family protein; PDBTitle: structure of probable glutathione s-transferase(pp0183) from2 pseudomonas putida
101 | d2ifqa1 |
| not modelled | 96.8 | 21 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
102 | c2kokA_ |
| not modelled | 96.8 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: solution structure of an arsenate reductase (arsc) related protein2 from brucella melitensis. seattle structural genomics center for3 infectious disease target braba.00007.a.
103 | d1a8la1 |
| not modelled | 96.8 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
104 | c1ljrB_ |
| not modelled | 96.8 | 10 | PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase; PDBTitle: glutathione transferase (hgst t2-2) from human
105 | d1r5aa2 |
| not modelled | 96.8 | 10 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain
106 | d1fo5a_ |
| not modelled | 96.8 | 23 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
107 | c2kucA_ |
| not modelled | 96.8 | 19 | PDB header:isomerase Chain: A: PDB Molecule:putative disulphide-isomerase; PDBTitle: solution structure of a putative disulphide-isomerase from bacteroides2 thetaiotaomicron
108 | c2vimA_ |
| not modelled | 96.8 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: x-ray structure of fasciola hepatica thioredoxin
109 | d2trcp_ |
| not modelled | 96.7 | 14 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Phosducin
110 | c2c3nB_ |
| not modelled | 96.7 | 8 | PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase theta 1; PDBTitle: human glutathione-s-transferase t1-1, apo form
111 | c2vlvA_ |
| not modelled | 96.7 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin h isoform 2.; PDBTitle: crystal structure of barley thioredoxin h isoform 2 in2 partially radiation-reduced state
112 | d1v9wa_ |
| not modelled | 96.7 | 14 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like
113 | c2cz2A_ |
| not modelled | 96.7 | 22 | PDB header:isomerase, transferase Chain: A: PDB Molecule:maleylacetoacetate isomerase; PDBTitle: crystal structure of glutathione transferase zeta 1-12 (maleylacetoacetate isomerase) from mus musculus (form-1 crystal)
114 | d1ep7a_ |
| not modelled | 96.7 | 15 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
115 | c1v2aD_ |
| not modelled | 96.7 | 18 | PDB header:transferase Chain: D: PDB Molecule:glutathione transferase gst1-6; PDBTitle: glutathione s-transferase 1-6 from anopheles dirus species b
116 | c1gnwA_ |
| not modelled | 96.7 | 10 | PDB header:transferase Chain: A: PDB Molecule:glutathione s-transferase; PDBTitle: structure of glutathione s-transferase
117 | c1aw9A_ |
| not modelled | 96.7 | 17 | PDB header:transferase Chain: A: PDB Molecule:glutathione s-transferase iii; PDBTitle: structure of glutathione s-transferase iii in apo form
118 | c3f0iA_ |
| not modelled | 96.6 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: arsenate reductase from vibrio cholerae.
119 | c2j23A_ |
| not modelled | 96.6 | 14 | PDB header:immune protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: cross-reactivity and crystal structure of malassezia2 sympodialis thioredoxin (mala s 13), a member of a new pan-3 allergen family
120 | d1syra_ |
| not modelled | 96.6 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0