07/01/2012 03:45:19 : INFO  : Run start: Sat Jan  7 03:45:18 GMT 2012
07/01/2012 03:45:21 : INFO  : Initialised job
07/01/2012 03:45:22 : INFO  : Renaming log file 'phyre2_20120107_034518.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6ff5fb1865af2c66/phyre_20120107_034518.log'
07/01/2012 03:45:23 : INFO  : Initialised job:
Sequence
>batch____
MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDG
KRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPVTL

07/01/2012 03:45:23 : INFO  : Checked sequence
07/01/2012 03:45:25 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 03:45:25 : INFO  : PSI-BLAST 3 iterations
07/01/2012 03:45:56 : INFO  : PSI-BLAST 5 iterations
07/01/2012 03:46:31 : INFO  : Finished PSI-BLAST
07/01/2012 03:46:32 : INFO  : Running Buildali to generate a3m file
07/01/2012 03:47:55 : INFO  : Converting to HMM
07/01/2012 03:47:56 : INFO  : Calibrating HMM
07/01/2012 03:48:03 : INFO  : Searching HMM database
07/01/2012 03:50:43 : INFO  : Finished buildali
07/01/2012 03:50:44 : INFO  : Predicting secondary structure
07/01/2012 03:50:48 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 03:50:48 : INFO  : Predicting Disordered regions
07/01/2012 03:50:50 : INFO  : Predicted Disorder (Disopred)
07/01/2012 03:50:51 : INFO  : Running memsat_svm check
07/01/2012 03:53:37 : INFO  : Globular protein
07/01/2012 03:53:38 : INFO  : Predicted Transmembrane (memsat_svm) ID '6ff5fb1865af2c66'
07/01/2012 03:53:39 : INFO  : Initialising fold library search
07/01/2012 03:53:42 : INFO  : Initialised search input
07/01/2012 03:53:43 : INFO  : Building Ensemble models
07/01/2012 03:53:47 : INFO  : Building hh.d1kuta_.model.1.pdb
07/01/2012 03:53:56 : INFO  : Building hh.c2ywvB_.model.2.pdb
07/01/2012 03:54:02 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/6ff5fb1865af2c66/hh.c2ywvB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/6ff5fb1865af2c66/c2ywvB_.2.pdb
07/01/2012 03:54:05 : INFO  : Building d1kuta_.1.pdb
07/01/2012 03:54:14 : INFO  : Building c2ywvB_.2.pdb
07/01/2012 03:54:23 : INFO  : Building c3kreA_.3.pdb
07/01/2012 03:54:32 : INFO  : Building c2h31A_.4.pdb
07/01/2012 03:54:40 : INFO  : Building c2gqsA_.5.pdb
07/01/2012 03:54:48 : INFO  : Building c2z02A_.6.pdb
07/01/2012 03:54:57 : INFO  : Building c3nuaB_.7.pdb
07/01/2012 03:55:07 : INFO  : Building c3dukD_.8.pdb
07/01/2012 03:55:16 : INFO  : Building c3noyA_.9.pdb
07/01/2012 03:55:25 : INFO  : Building d2rgqa1.10.pdb
07/01/2012 03:55:34 : INFO  : Building d1whra_.11.pdb
07/01/2012 03:55:42 : INFO  : Building c3fkaD_.12.pdb
07/01/2012 03:55:50 : INFO  : Building d1x4ta1.13.pdb
07/01/2012 03:55:58 : INFO  : Building d1h8ba_.14.pdb
07/01/2012 03:56:07 : INFO  : Building c2plyB_.15.pdb
07/01/2012 03:56:15 : INFO  : Building d1zk8a2.16.pdb
07/01/2012 03:56:23 : INFO  : Building d1k9vf_.17.pdb
07/01/2012 03:56:33 : INFO  : Building d1ofcx1.18.pdb
07/01/2012 03:56:43 : INFO  : Building d1xlya_.19.pdb
07/01/2012 03:56:55 : INFO  : Building d1ogyb_.20.pdb
07/01/2012 03:57:20 : INFO  : Finished HH model building
07/01/2012 03:57:21 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 03:58:49 : INFO  : html domain output complete ID '6ff5fb1865af2c66'
07/01/2012 04:06:26 : INFO  : Run end  : Sat Jan  7 04:06:25 GMT 2012
