Phyre 2 alignment of P39283 with c2xa6B_

Return to main results | Retrieve Phyre Job Id

Job Description | P39283
Confidence | 1.72% | Date | Thu Jan 5 11:58:53 GMT 2012
Rank | 97 | Aligned Residues | 19
% Identity | 26% | Template | c2xa6B_
PDB info | PDB header:transcription | Chain: B: PDB Molecule:kh domain-containing\,rna-binding\,signal | PDBTitle: structural basis for homodimerization of the src-associated2 during mitosis, 68 kd protein (sam68) qua1 domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | G | D | V | A | E | I | E | Q | T | I | L | S | F | V | D | A | C | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | E | L | M | A | E | K | D | S | L | D | P | S | F | T | H | A | M | Q
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions