269 c3civA_ Probab=51.48   E-value=17  Score=16.25  Aligned_columns=259  Identities=14%

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCC
Q ss_conf             76999999998649978999986157866555501135777886467245888987653087579740111014774222
Q batch____       334 RNIDVLIQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLT  413 (672)
Q Consensus       334 ~~l~~lldr~~~~~~ntV~lq~~~~p~gd~~~~~~yfp~~~~P~~~d~~~~~a~ql~~r~g~~v~AW~~~~~~~~~~~~~  413 (672)
                      ......|+.|+++|+|+|=+.++....   ...+...-....+.-.+---..+.++++++||.|---+.+.....+....
T Consensus        26 ~~~~~~l~~l~~~G~N~vRi~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~Vil~~h~~~~~~~w~~~  102 (316)
T c3civA_          26 DEARASMRALAEQPFNWVTLAFAGLME---HPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGE  102 (316)
T ss_dssp             HHHHHHHHHHHHSSCSEEEEEEEEEES---STTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGG
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
T ss_conf             689999999998399899982324777---76776544476776797899999999986898799972358888765556


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             23212466657614657840357779899999999999998517886588725324676558898889999871588773
Q batch____       414 RVKYLPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSL  493 (672)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~l~P~~p~vr~~i~~l~~dl~~~y~idGI~f~dd~~~~~~e~~~~~a~~~y~~~g~~~~~  493 (672)
                      ............                ..+.+.++|+....++.+-+.-.......--.|.-+......          
T Consensus       103 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~a~~~~~~~nE~~~~gne~~~~~~~~~----------  156 (316)
T c3civA_         103 IRFEKEHGPDLE----------------SWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEA----------  156 (316)
T ss_dssp             CCCSBSCCTTSS----------------BHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTCHH----------
T ss_pred             CCCCCCCCCCHH----------------HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHH----------
T ss_conf             676786012557----------------699999999999987999987419985850677776001467----------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHCCEEEEEEHH
Q ss_conf             22456855668899988998999999999999743287753610233100367788988746889898617844683023
Q batch____       494 SEIRQNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDWTAIMAMP  573 (672)
Q Consensus       494 ~~~~~~~~~~~~W~~~k~~~l~~f~~~l~~~vk~~~~p~l~~a~~i~~~~~~~~~~~~w~aQ~~~~~l~~yD~~~i~~m~  573 (672)
                                             +..++.+.+|+..+-.+..+.+-.........             ..+|++-+..++
T Consensus       157 -----------------------~~~~~~~~ir~~dp~~~~~~~~~~~~~~~~~~-------------~~~D~ig~~~Y~  200 (316)
T c3civA_         157 -----------------------MWRETIARVRTEYDGLVTYNCNHGREEHVRFW-------------DAVDLISSSAYY  200 (316)
T ss_dssp             -----------------------HHHHHHHHHHHHCCSEEEEEEETTCTTTCSCG-------------GGSSEEEEECCC
T ss_pred             -----------------------HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-------------CCCCEEEEECCC
T ss_conf             -----------------------89999999997469977994468863334533-------------345767631477


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC-----------HHHHHHHHHHHHHC----C
Q ss_conf             31255656779999999998851467744247874212657777646899-----------88999999999957----6
Q batch____       574 YLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQAIS-----------SQQLAHWMSLLQLN----G  638 (672)
Q Consensus       574 y~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vfeLqa~dw~~~~~~~~i~-----------~~~L~~q~~~l~~~----G  638 (672)
                      .....  ......+..+....     .+-..+-|.........+...+..           ...++.+.+.+.+.    |
T Consensus       201 ~~~~~--~~~~~~~~~~~~~~-----~kPi~i~E~G~~~~~g~~~~~~~~~~~~~~~~~~Qa~~~~~~~~~~~~~~~~~G  273 (316)
T c3civA_         201 PIDRW--RDRVPVLREVAEAH-----EKPLFFMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKG  273 (316)
T ss_dssp             CGGGH--HHHHHHHHHHHHHH-----TCCEEEEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEE
T ss_pred             CCCCH--HHHHHHHHHHHHCC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             74306--88999865465305-----885799701452235776676576664456989999999999999853778025


Q ss_pred             CCEEEECCCCH------------HCCCCCHHHHHHHHH
Q ss_conf             65389326501------------037866678877641
Q batch____       639 VKNYGYYPDNF------------LHNQPEIDLIRPEFS  664 (672)
Q Consensus       639 ~~~~~yyp~~~------------~~~~p~~~~~~~~~s  664 (672)
                      +.=|-+.....            ..+.|..+.||.+++
T Consensus       274 ~~~W~w~~~~~~~~~~~~d~~f~~~~Kpa~~v~~~~~~  311 (316)
T c3civA_         274 YMLWEWPWKLYPREAASEDGSYCIYGKPAEDVVARAFS  311 (316)
T ss_dssp             EEEEEECSSCCCGGGGGGCCSSCCTTSHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHH
T ss_conf             99986168788733256488520776218999999998